Psyllid ID: psy14197

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccEEEEEEcccccccccEEEEccccEEEEEcccccEEEEEEccccEEEcccccEEEEEEEEccccEEEEEEcccHHHHHHHHHHcccEEEEccHHHccccHHHHHHccccc
cccccccccccccHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccEEEEEEEEccccccEEEEEEcccEEEEccccccEEEEEEccHEEEEEccccccEEEEEEccccEEEEEEcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccc
mqkpaptpaispasldicAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQslpdygltlfvikpmghkkeellgvtpsRLMRMelssgdhvrtwryDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
mqkpaptpaispasldiCAEDYVSSRYIKKLRSKLSQRILEAHanvkdlgltEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMElssgdhvrtwrydTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
**************LDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMR********************
****************ICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIF***************LFHKLTGG*
**********SPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
*********ISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query178 2.2.26 [Sep-21-2011]
Q9VZI3708 Unc-112-related protein O yes N/A 1.0 0.251 0.651 4e-67
Q96AC1680 Fermitin family homolog 2 yes N/A 1.0 0.261 0.516 6e-51
Q8CIB5680 Fermitin family homolog 2 yes N/A 1.0 0.261 0.510 2e-50
Q18685720 Protein unc-112 OS=Caenor yes N/A 0.915 0.226 0.515 6e-50
Q5R8M5677 Fermitin family homolog 1 yes N/A 0.971 0.255 0.525 3e-49
Q9BQL6677 Fermitin family homolog 1 no N/A 0.971 0.255 0.52 3e-48
P59113677 Fermitin family homolog 1 no N/A 0.971 0.255 0.525 6e-47
Q8K1B8665 Fermitin family homolog 3 no N/A 0.932 0.249 0.457 4e-43
Q32LP0665 Fermitin family homolog 3 no N/A 0.870 0.233 0.490 6e-43
Q86UX7667 Fermitin family homolog 3 no N/A 0.955 0.254 0.451 3e-42
>sp|Q9VZI3|UN112_DROME Unc-112-related protein OS=Drosophila melanogaster GN=Fit1 PE=1 SV=1 Back     alignment and function desciption
 Score =  253 bits (646), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 116/178 (65%), Positives = 145/178 (81%)

Query: 1   MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIR 60
           MQKPA    ++     +   DY+S + ++KL SK  QRILEAHANV+ L L +AK+ YI+
Sbjct: 530 MQKPAQGAPLTVNPRSVEPMDYLSPKMMRKLSSKAVQRILEAHANVRQLSLMDAKMKYIQ 589

Query: 61  AWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWE 120
           AWQSLPD+G+TLF+IK  GHKKEELLGV  +R+MRM+L++GDH++TWRY+T+KAWNVNW 
Sbjct: 590 AWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMKAWNVNWG 649

Query: 121 IKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW 178
           IK MM+QL D N +F  QSADCKVVHEFIGGYIF+SMRSK+ NQTLNE++FHKLTGGW
Sbjct: 650 IKCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMFHKLTGGW 707
Probably involved in cell adhesion.
Drosophila melanogaster (taxid: 7227)
>sp|Q96AC1|FERM2_HUMAN Fermitin family homolog 2 OS=Homo sapiens GN=FERMT2 PE=1 SV=1 Back     alignment and function description
>sp|Q8CIB5|FERM2_MOUSE Fermitin family homolog 2 OS=Mus musculus GN=Fermt2 PE=1 SV=1 Back     alignment and function description
>sp|Q18685|UN112_CAEEL Protein unc-112 OS=Caenorhabditis elegans GN=unc-112 PE=1 SV=1 Back     alignment and function description
>sp|Q5R8M5|FERM1_PONAB Fermitin family homolog 1 OS=Pongo abelii GN=FERMT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9BQL6|FERM1_HUMAN Fermitin family homolog 1 OS=Homo sapiens GN=FERMT1 PE=1 SV=1 Back     alignment and function description
>sp|P59113|FERM1_MOUSE Fermitin family homolog 1 OS=Mus musculus GN=Fermt1 PE=1 SV=4 Back     alignment and function description
>sp|Q8K1B8|URP2_MOUSE Fermitin family homolog 3 OS=Mus musculus GN=Fermt3 PE=1 SV=1 Back     alignment and function description
>sp|Q32LP0|URP2_BOVIN Fermitin family homolog 3 OS=Bos taurus GN=FERMT3 PE=2 SV=1 Back     alignment and function description
>sp|Q86UX7|URP2_HUMAN Fermitin family homolog 3 OS=Homo sapiens GN=FERMT3 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query178
321463775 697 hypothetical protein DAPPUDRAFT_199712 [ 1.0 0.255 0.735 1e-77
307178489 664 Unc-112-related protein [Camponotus flor 1.0 0.268 0.730 1e-77
307200435 665 Unc-112-related protein [Harpegnathos sa 1.0 0.267 0.724 3e-77
350417495 713 PREDICTED: unc-112-related protein-like 1.0 0.249 0.724 4e-77
332019227 664 Unc-112-related protein [Acromyrmex echi 1.0 0.268 0.724 6e-77
328785955 713 PREDICTED: unc-112-related protein-like 1.0 0.249 0.719 1e-76
380026009 713 PREDICTED: unc-112-related protein-like 1.0 0.249 0.719 1e-76
340714139 711 PREDICTED: unc-112-related protein-like 1.0 0.250 0.719 2e-76
189239630 704 PREDICTED: similar to Fermitin, putative 0.994 0.251 0.730 4e-76
270010684 711 hypothetical protein TcasGA2_TC010123 [T 0.994 0.248 0.730 5e-76
>gi|321463775|gb|EFX74788.1| hypothetical protein DAPPUDRAFT_199712 [Daphnia pulex] Back     alignment and taxonomy information
 Score =  294 bits (752), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 131/178 (73%), Positives = 161/178 (90%)

Query: 1   MQKPAPTPAISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIR 60
           MQKPAP PAI+P+SLDI  +DYV+ R+I+KL++K+S RILEAH NVKDL LTEAKL+YI+
Sbjct: 519 MQKPAPAPAINPSSLDIQPDDYVAPRFIRKLKNKVSTRILEAHTNVKDLSLTEAKLNYIK 578

Query: 61  AWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWE 120
           AWQSLP+YG++LFV+K MG +KEELLGV  +RLMRM+L++GDH++TWRY+T+KAWNVNWE
Sbjct: 579 AWQSLPEYGVSLFVVKFMGQRKEELLGVAFNRLMRMDLTTGDHIKTWRYNTMKAWNVNWE 638

Query: 121 IKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW 178
           +KHMM+Q  + + IF C SADCKVVHEFIGGYIFLSMRSK+ANQTLNE+LFHKLTGGW
Sbjct: 639 VKHMMVQFEEESVIFSCLSADCKVVHEFIGGYIFLSMRSKEANQTLNEELFHKLTGGW 696

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307178489|gb|EFN67178.1| Unc-112-related protein [Camponotus floridanus] Back     alignment and taxonomy information
>gi|307200435|gb|EFN80644.1| Unc-112-related protein [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350417495|ref|XP_003491450.1| PREDICTED: unc-112-related protein-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332019227|gb|EGI59737.1| Unc-112-related protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328785955|ref|XP_392367.3| PREDICTED: unc-112-related protein-like isoform 1 [Apis mellifera] Back     alignment and taxonomy information
>gi|380026009|ref|XP_003696754.1| PREDICTED: unc-112-related protein-like isoform 1 [Apis florea] Back     alignment and taxonomy information
>gi|340714139|ref|XP_003395589.1| PREDICTED: unc-112-related protein-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|189239630|ref|XP_970799.2| PREDICTED: similar to Fermitin, putative [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270010684|gb|EFA07132.1| hypothetical protein TcasGA2_TC010123 [Tribolium castaneum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query178
FB|FBgn0035498708 Fit1 "Fermitin 1" [Drosophila 0.988 0.248 0.661 1.1e-62
FB|FBgn0036688715 Fit2 "Fermitin 2" [Drosophila 1.0 0.248 0.646 3e-62
UNIPROTKB|F1NPF7684 FERMT1 "Uncharacterized protei 0.971 0.252 0.525 1.1e-48
UNIPROTKB|E1C0T6680 PLEKHC1 "Uncharacterized prote 1.0 0.261 0.521 2.9e-48
UNIPROTKB|Q96AC1680 FERMT2 "Fermitin family homolo 1.0 0.261 0.516 2.9e-48
ZFIN|ZDB-GENE-030131-3264666 fermt1 "fermitin family member 0.994 0.265 0.521 2.9e-48
UNIPROTKB|A7MB21680 FERMT2 "Uncharacterized protei 1.0 0.261 0.516 4.7e-48
UNIPROTKB|F1PFB4630 FERMT2 "Uncharacterized protei 1.0 0.282 0.516 4.7e-48
UNIPROTKB|F1SFE3505 LOC100154173 "Uncharacterized 1.0 0.352 0.516 7.7e-48
MGI|MGI:2385001680 Fermt2 "fermitin family homolo 1.0 0.261 0.510 7.7e-48
FB|FBgn0035498 Fit1 "Fermitin 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 119/180 (66%), Positives = 149/180 (82%)

Query:     1 MQKPAP-TP-AISPASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSY 58
             MQKPA   P  ++P S++    DY+S + ++KL SK  QRILEAHANV+ L L +AK+ Y
Sbjct:   530 MQKPAQGAPLTVNPRSVE--PMDYLSPKMMRKLSSKAVQRILEAHANVRQLSLMDAKMKY 587

Query:    59 IRAWQSLPDYGLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVN 118
             I+AWQSLPD+G+TLF+IK  GHKKEELLGV  +R+MRM+L++GDH++TWRY+T+KAWNVN
Sbjct:   588 IQAWQSLPDFGVTLFIIKFDGHKKEELLGVANNRIMRMDLNTGDHIKTWRYNTMKAWNVN 647

Query:   119 WEIKHMMLQLTDGNFIFECQSADCKVVHEFIGGYIFLSMRSKDANQTLNEDLFHKLTGGW 178
             W IK MM+QL D N +F  QSADCKVVHEFIGGYIF+SMRSK+ NQTLNE++FHKLTGGW
Sbjct:   648 WGIKCMMIQLQDENIVFSVQSADCKVVHEFIGGYIFMSMRSKENNQTLNEEMFHKLTGGW 707
GO:0005543 "phospholipid binding" evidence=IEA
FB|FBgn0036688 Fit2 "Fermitin 2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NPF7 FERMT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0T6 PLEKHC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q96AC1 FERMT2 "Fermitin family homolog 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-3264 fermt1 "fermitin family member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A7MB21 FERMT2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFB4 FERMT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1SFE3 LOC100154173 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2385001 Fermt2 "fermitin family homolog 2 (Drosophila)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q18685UN112_CAEELNo assigned EC number0.51510.91570.2263yesN/A
Q96AC1FERM2_HUMANNo assigned EC number0.51641.00.2617yesN/A
Q9VZI3UN112_DROMENo assigned EC number0.65161.00.2514yesN/A
Q5R8M5FERM1_PONABNo assigned EC number0.52570.97190.2555yesN/A
Q8CIB5FERM2_MOUSENo assigned EC number0.51091.00.2617yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query178
cd1320589 cd13205, FERM_C_fermitin, Fermitin family FERM dom 1e-50
pfam00373113 pfam00373, FERM_M, FERM central domain 6e-12
cd0083691 cd00836, FERM_C-lobe, FERM domain C-lobe 2e-05
>gnl|CDD|241359 cd13205, FERM_C_fermitin, Fermitin family FERM domain C-lobe Back     alignment and domain information 
 Score =  157 bits (398), Expect = 1e-50
 Identities = 54/89 (60%), Positives = 72/89 (80%)

Query: 69  GLTLFVIKPMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQL 128
           G+T F+++  G KK+ELLGV  +RL+RM+L +GD ++TWRY T+KAWNVNWEI+ +++Q 
Sbjct: 1   GITYFIVRFRGSKKDELLGVAYNRLIRMDLHTGDVLKTWRYSTMKAWNVNWEIREVIIQF 60

Query: 129 TDGNFIFECQSADCKVVHEFIGGYIFLSM 157
            D +  F C SADCK+VHEFIGGYIFLSM
Sbjct: 61  EDESIAFACLSADCKIVHEFIGGYIFLSM 89

Fermitin functions as a mediator of integrin inside-out signalling. The recruitment of Fermitin proteins and Talin to the membrane mediates the terminal event of integrin signalling, via interaction with integrin beta subunits. Fermatin has FERM domain interrupted with a pleckstrin homology (PH) domain. Fermitin family homologs (Fermt1, 2, and 3, also known as Kindlins) are each encoded by a different gene. In mammalian studies, Fermt1 is generally expressed in epithelial cells, Fermt2 is expressed inmuscle tissues, and Fermt3 is expressed in hematopoietic lineages. Specifically Fermt2 is expressed in smooth and striated muscle tissues in mice and in the somites (a trunk muscle precursor) and neural crest in Xenopus embryos. As such it has been proposed that Fermt2 plays a role in cardiomyocyte and neural crest differentiation. Expression of mammalian Fermt3 is associated with hematopoietic lineages: the anterior ventral blood islands, vitelline veins, and early myeloid cells. In Xenopus embryos this expression, also include the notochord and cement gland. The FERM domain has a cloverleaf tripart structure (FERM_N, FERM_M, FERM_C/N, alpha-, and C-lobe/A-lobe, B-lobe, C-lobe/F1, F2, F3). This cd is not included in the C-lobe hierarchy based on its position in the tree. One thing to note is that unlike the other members of the C-lobe hierarchy it contains 2 FERM M domains which might also reflect a difference in its evolutionary history. The C-lobe/F3 within the FERM domain is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs) , the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites. Length = 89
>gnl|CDD|215882 pfam00373, FERM_M, FERM central domain Back     alignment and domain information
>gnl|CDD|241233 cd00836, FERM_C-lobe, FERM domain C-lobe Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 178
KOG3727|consensus664 100.0
KOG4261|consensus 1003 99.96
PF00373126 FERM_M: FERM central domain; InterPro: IPR019748 T 99.31
KOG3529|consensus 596 99.29
smart00295207 B41 Band 4.1 homologues. Also known as ezrin/radix 99.07
cd0083692 FERM_C FERM_C domain. The FERM_C domain is the thi 98.9
KOG3530|consensus 616 98.63
KOG0248|consensus936 98.59
PF02174100 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 98.39
cd00824104 PTBI IRS-like phosphotyrosine-binding domain. IRS- 98.17
cd01203104 DOK_PTB Downstream of tyrosine kinase (DOK) Phosph 98.08
KOG3552|consensus 1298 98.0
smart0031098 PTBI Phosphotyrosine-binding domain (IRS1-like). 97.94
KOG0792|consensus 1144 97.9
PF0938090 FERM_C: FERM C-terminal PH-like domain; InterPro: 97.6
cd01202102 FRS2 Fibroblast growth factor receptor substrate 2 97.32
KOG4257|consensus 974 97.29
cd01216123 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, ph 96.98
PF00640140 PID: Phosphotyrosine interaction domain (PTB/PID) 96.8
KOG3527|consensus 975 96.77
cd01268138 Numb Numb Phosphotyrosine-binding (PTB) domain. Nu 96.66
KOG4261|consensus 1003 96.65
cd00934123 PTB Phosphotyrosine-binding (PTB) domain. Phosphot 96.63
KOG4371|consensus 1332 96.49
cd01267132 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, 95.92
cd01272138 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. 95.85
cd01269129 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) dom 95.41
cd0043585 ACBP Acyl CoA binding protein (ACBP) binds thiol e 95.35
KOG3784|consensus407 95.15
PF08416131 PTB: Phosphotyrosine-binding domain; InterPro: IPR 95.08
smart00462134 PTB Phosphotyrosine-binding domain, phosphotyrosin 94.83
cd01215139 Dab Disabled (Dab) Phosphotyrosine-binding domain. 93.05
cd01274127 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) doma 92.88
PF0088787 ACBP: Acyl CoA binding protein; InterPro: IPR00058 92.44
PTZ0045890 acyl CoA binding protein; Provisional 92.11
cd01273142 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. 91.4
KOG3535|consensus 557 90.82
cd01208156 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 89.44
cd01210127 EPS8 Epidermal growth factor receptor kinase subst 87.39
PF06017199 Myosin_TH1: Myosin tail; InterPro: IPR010926 These 87.01
cd01209160 SHC SHC phosphotyrosine-binding (PTB) domain. SHC 85.09
PF1447096 bPH_3: Bacterial PH domain 82.01
>KOG3727|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.4e-53  Score=377.08  Aligned_cols=178  Identities=61%  Similarity=1.102  Sum_probs=171.8

Q ss_pred             CCCCCCC-C--CCCCCcccccccccCChHHHHHhhhH-HHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEe
Q psy14197          1 MQKPAPT-P--AISPASLDICAEDYVSSRYIKKLRSK-LSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIK   76 (178)
Q Consensus         1 ~q~~~~~-~--~~~~~~~~~~l~~~lP~~~ik~~~~k-~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk   76 (178)
                      ||+++++ +  +.+..|...++.+||.|++++++++| +.++|++||++++.||..|||++||++||+||.||+|+|.|+
T Consensus       481 MQ~~n~g~~q~~~~~~~~d~np~~~vSPr~~rk~ksKQ~~~RILEAHqNVaQlsl~EAKLrfIQAWQSLPeFGityfivR  560 (664)
T KOG3727|consen  481 MQRPNSGSRQAAPVKLPRDVNPECYVSPRYVRKLKSKQITQRILEAHQNVAQLSLTEAKLRFIQAWQSLPEFGITYFIVR  560 (664)
T ss_pred             hcCCCCCCCcCCcccCcCCCCchhhcCHHHHHHHhhHHHHHHHHHHhhhHhhhhhHHHHHHHHHHHhhccccCcEEEEEE
Confidence            8999773 3  33456899999999999999999999 999999999999999999999999999999999999999999


Q ss_pred             ecCCCCceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHHHHHHHHhhhhhH
Q psy14197         77 PMGHKKEELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFL  155 (178)
Q Consensus        77 ~~g~~~p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~~i~~Li~~Yi~l  155 (178)
                      ++|.+|++||||+.+++++||..||+.++||+|+.|+.|+|||+.+.++|+|.++ ...|+|.+++|+.+||+|+||||+
T Consensus       561 FkGsrKeEllGVA~NRLirmDlatGd~iKTWRfsnMKqWNVNWeir~v~IeF~dev~iaFsc~SADCKVVHEfIGGYIFL  640 (664)
T KOG3727|consen  561 FKGSRKEELLGVAYNRLIRMDLATGDHIKTWRFSNMKQWNVNWEIRQVMIEFEDEVNIAFSCLSADCKVVHEFIGGYIFL  640 (664)
T ss_pred             ecCcchHHHHhhhhhheeeeecccCCceeeeeecchhhhcccceeeEEEEEecccceEEEEeecccchhhhhhccceEEE
Confidence            9999999999999999999999999999999999999999999999999999999 599999999999999999999999


Q ss_pred             hhhccccccccchhhhhhhcCCC
Q psy14197        156 SMRSKDANQTLNEDLFHKLTGGW  178 (178)
Q Consensus       156 ~~~~~~~~q~~~~~~f~~~~~~~  178 (178)
                      +||+|+.||+|||||||||||||
T Consensus       641 StRsKd~netLDEeLFhKLTGGw  663 (664)
T KOG3727|consen  641 STRSKDQNETLDEELFHKLTGGW  663 (664)
T ss_pred             EecchhccccccHHHHHhhccCC
Confidence            99999999999999999999999

>KOG4261|consensus Back     alignment and domain information
>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4 Back     alignment and domain information
>KOG3529|consensus Back     alignment and domain information
>smart00295 B41 Band 4 Back     alignment and domain information
>cd00836 FERM_C FERM_C domain Back     alignment and domain information
>KOG3530|consensus Back     alignment and domain information
>KOG0248|consensus Back     alignment and domain information
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain Back     alignment and domain information
>cd00824 PTBI IRS-like phosphotyrosine-binding domain Back     alignment and domain information
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain Back     alignment and domain information
>KOG3552|consensus Back     alignment and domain information
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like) Back     alignment and domain information
>KOG0792|consensus Back     alignment and domain information
>PF09380 FERM_C: FERM C-terminal PH-like domain; InterPro: IPR018980 The FERM domain (F for 4 Back     alignment and domain information
>cd01202 FRS2 Fibroblast growth factor receptor substrate 2 (FRS2/SNT1) Phosphotyrosine-binding domain Back     alignment and domain information
>KOG4257|consensus Back     alignment and domain information
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain Back     alignment and domain information
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains Back     alignment and domain information
>KOG3527|consensus Back     alignment and domain information
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>KOG4261|consensus Back     alignment and domain information
>cd00934 PTB Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>KOG4371|consensus Back     alignment and domain information
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain Back     alignment and domain information
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity Back     alignment and domain information
>KOG3784|consensus Back     alignment and domain information
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein Back     alignment and domain information
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain Back     alignment and domain information
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain Back     alignment and domain information
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters [] Back     alignment and domain information
>PTZ00458 acyl CoA binding protein; Provisional Back     alignment and domain information
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>KOG3535|consensus Back     alignment and domain information
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT) Back     alignment and domain information
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain Back     alignment and domain information
>PF14470 bPH_3: Bacterial PH domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query178
3g9w_A223 Crystal Structure Of Talin2 F2-f3 In Complex With T 3e-10
1y19_B202 Structural Basis For Phosphatidylinositol Phosphate 3e-10
4f7g_A222 Crystal Structure Of Talin Autoinhibition Complex L 3e-10
1mk7_B192 Crystal Structure Of An Integrin Beta3-Talin Chimer 1e-09
3ivf_A371 Crystal Structure Of The Talin Head Ferm Domain Len 1e-09
1miz_B201 Crystal Structure Of An Integrin Beta3-Talin Chimer 1e-09
1mix_A206 Crystal Structure Of A Ferm Domain Of Talin Length 1e-09
>pdb|3G9W|A Chain A, Crystal Structure Of Talin2 F2-f3 In Complex With The Integrin Beta1d Cytoplasmic Tail Length = 223 Back     alignment and structure 
Iteration: 1

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 12  PASLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLT 71
           P  LD+  ++++   YIK+  ++  +RI + H N  ++   EAK+ Y++  +SL  YG++
Sbjct: 74  PGFLDL--KEFLPKEYIKQRGAE--KRIFQEHKNCGEMSEIEAKVKYVKLARSLRTYGVS 129
Query: 72  LFVIKPMGHKKEE----LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQ 127
            F++K     K +    LLG+T   +MR++  + + ++ W   TVK W  +   K   L 
Sbjct: 130 FFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVLQEWPLTTVKRWAAS--PKSFTLD 187
Query: 128 LTD-GNFIFECQSADCKVVHEFIGGYIFLSMRSKDA 162
             +     +  Q+ + + + + I GYI + ++ K +
Sbjct: 188 FGEYQESYYSVQTTEGEQISQLIAGYIDIILKKKQS 223
>pdb|1Y19|B Chain B, Structural Basis For Phosphatidylinositol Phosphate Kinase Type I-Gamma Binding To Talin At Focal Adhesions Length = 202 Back     alignment and structure
>pdb|4F7G|A Chain A, Crystal Structure Of Talin Autoinhibition Complex Length = 222 Back     alignment and structure
>pdb|1MK7|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera Length = 192 Back     alignment and structure
>pdb|3IVF|A Chain A, Crystal Structure Of The Talin Head Ferm Domain Length = 371 Back     alignment and structure
>pdb|1MIZ|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera Length = 201 Back     alignment and structure
>pdb|1MIX|A Chain A, Crystal Structure Of A Ferm Domain Of Talin Length = 206 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query178
4f7g_A222 Talin-1; alpha-helix bundle, integrin activation, 2e-33
1mix_A206 Talin; focal adhesion, integrin binding, FERM doma 6e-30
3ivf_A371 Talin-1; FERM domain, cell membrane, cell projecti 4e-19
4dxa_B322 KREV interaction trapped protein 1; GTPase, FERM, 2e-12
3au4_A555 Myosin-X; protein-protein complex, motor protein c 7e-11
1h4r_A314 Merlin; FERM, neurofibromatosis, NF2, structural p 5e-07
3qij_A296 Protein 4.1; cytoskeleton, structural genomics, st 8e-07
1ef1_A294 Moesin; membrane, FERM domain, tail domain, membra 3e-06
2i1j_A 575 Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, 4e-06
3pvl_A655 Myosin VIIA isoform 1; protein complex, novel fold 5e-06
2al6_A375 Focal adhesion kinase 1; transferase; 2.35A {Gallu 8e-04
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} Length = 222 Back     alignment and structure
 Score =  117 bits (295), Expect = 2e-33
 Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 20  EDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG 79
           +D++   Y+K+   K  ++I +AH N   +   EAK+ Y++  +SL  YG++ F++K   
Sbjct: 80  KDFLPKEYVKQ---KGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKM 136

Query: 80  HKK----EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTD-GNFI 134
             K      LLG+T   +MR++  + + ++ W    +K W  +   K   L   D  +  
Sbjct: 137 KGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGY 194

Query: 135 FECQSADCKVVHEFIGGYIFLSMRSKDA 162
           +  Q+ + + + + I GYI + ++ K +
Sbjct: 195 YSVQTTEGEQIAQLIAGYIDIILKKKKS 222
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B Length = 206 Back     alignment and structure
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A Length = 371 Back     alignment and structure
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} Length = 322 Back     alignment and structure
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A Length = 555 Back     alignment and structure
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A Length = 314 Back     alignment and structure
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A Length = 296 Back     alignment and structure
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A Length = 294 Back     alignment and structure
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A Length = 575 Back     alignment and structure
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus} Length = 655 Back     alignment and structure
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A Length = 375 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query178
4f7g_A222 Talin-1; alpha-helix bundle, integrin activation, 100.0
1mix_A206 Talin; focal adhesion, integrin binding, FERM doma 99.97
3ivf_A371 Talin-1; FERM domain, cell membrane, cell projecti 99.96
4dxa_B322 KREV interaction trapped protein 1; GTPase, FERM, 99.95
1h4r_A314 Merlin; FERM, neurofibromatosis, NF2, structural p 99.93
1ef1_A294 Moesin; membrane, FERM domain, tail domain, membra 99.93
3au4_A555 Myosin-X; protein-protein complex, motor protein c 99.92
2i1j_A 575 Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, 99.91
2al6_A375 Focal adhesion kinase 1; transferase; 2.35A {Gallu 99.9
3pvl_A655 Myosin VIIA isoform 1; protein complex, novel fold 99.88
4eku_A392 Protein-tyrosine kinase 2-beta; proline-rich tyros 99.87
3qij_A296 Protein 4.1; cytoskeleton, structural genomics, st 99.83
2j0j_A 656 Focal adhesion kinase 1; cell migration, FERM, tra 98.93
1j0w_A103 Downstream of tyrosine kinase 5; beta strands, ALF 98.06
2v76_A107 Docking protein 1; alternative splicing, protein-b 97.76
1p5t_A127 DOK1, docking protein 1; signaling protein; 2.35A 97.75
2dlw_A113 Docking protein 2, isoform A; IRS domain, structur 97.61
3ml4_A224 Protein DOK-7; tyrosine phosphorylation, adapter p 97.4
2kup_A146 Fibroblast growth factor receptor substrate 3; com 97.37
2kuq_A153 Fibroblast growth factor receptor substrate 3, LI 97.26
1xr0_B129 FGFR signalling adaptor SNT-1; phosphotyrosine bin 97.26
3d8d_A148 Amyloid beta A4 precursor protein-binding family 1 97.25
1qqg_A264 IRS-1, insulin receptor substrate 1; beta-sandwhic 96.77
3f0w_A168 NUMB-R, NUMB-like protein; PH domain-like, PID dom 96.57
1ntv_A152 Disabled homolog 1; beta-sandwich, signaling prote 95.94
1aqc_A172 X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1 95.91
3so6_A137 LDL receptor adaptor protein; PTB, endocytic adapt 95.22
2ej8_A160 DCC-interacting protein 13 alpha; structural genom 95.2
1p3r_A160 Disabled homolog 2; PTB, signaling protein; 2.10A 94.9
2ela_A175 Adapter protein containing PH domain, PTB domain a 94.7
4dbb_A162 Amyloid beta A4 precursor protein-binding family 1 94.7
2cy5_A140 Epidermal growth factor receptor pathway substrate 94.47
1hbk_A89 ACBP, acyl-COA binding protein; fatty acid metabol 93.5
2lbb_A96 Acyl COA binding protein; protein binding, structu 93.17
1n3h_A207 SHC transforming protein; free protein, beta sandw 93.02
2cb8_A87 Acyl-COA-binding protein; acyl-coenzyme A binding 92.87
3epy_A89 Acyl-COA-binding domain-containing protein 7; acyl 92.52
1st7_A86 ACBP, acyl-COA-binding protein; four helix bundle, 92.41
2wh5_A106 Acyl-COA-binding domain-containing protein 4; alte 92.25
2cop_A109 Acyl-coenzyme A binding domain containing 6; acyl 91.92
3flv_A119 Acyl-COA-binding domain-containing protein 5; lipi 90.84
2cqu_A116 Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA bi 90.79
3fp5_A106 Acyl-COA binding protein; ACBP, cacao disease, fat 90.27
3suz_A 388 Amyloid beta A4 precursor protein-binding family 2 85.77
3dxe_A140 Amyloid beta A4 protein-binding family B member 1; 84.89
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=1.1e-32  Score=223.61  Aligned_cols=143  Identities=25%  Similarity=0.503  Sum_probs=128.4

Q ss_pred             cccccccccCChHHHHHhhhHHHHHHHHHHhccCCCChhHHHHHHHHHHhcCCCCceeEEEEeecC--CC--CceEEEEc
Q psy14197         14 SLDICAEDYVSSRYIKKLRSKLSQRILEAHANVKDLGLTEAKLSYIRAWQSLPDYGLTLFVIKPMG--HK--KEELLGVT   89 (178)
Q Consensus        14 ~~~~~l~~~lP~~~ik~~~~k~~~~I~~~h~~~~~ls~~eAK~~yLk~~~~lp~fG~tfF~Vk~~g--~~--~p~lLGI~   89 (178)
                      +++..++.|+|+++++.   .|+++|.++|+++.|+|+.|||++||++|++||+||++||.|+.+.  .+  .|.+||||
T Consensus        74 ~~~~~l~~~lP~~~~~~---~~~~~I~~~h~~~~g~s~~eA~~~yL~~~~~l~~yG~~~f~v~~~~~g~~~~~~~~LgI~  150 (222)
T 4f7g_A           74 AGFLDLKDFLPKEYVKQ---KGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGIT  150 (222)
T ss_dssp             SSCSCGGGTSCGGGGGG---CCHHHHHHHHHTTTTCCHHHHHHHHHHHHHTSTTTTCEEEEEEEECTTSSCEEEEEEEEC
T ss_pred             cCccchhhccCHHHHhh---hhHHHHHHHHHhccCCCHHHHHHHHHHHHhhccccCcEEEEEEEecCCCCCCCCEEEEEc
Confidence            56789999999999873   3689999999999999999999999999999999999999999863  33  37899999


Q ss_pred             CCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHHHHHHHHhhhhhHhhhccc
Q psy14197         90 PSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCKVVHEFIGGYIFLSMRSKD  161 (178)
Q Consensus        90 ~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~~i~~Li~~Yi~l~~~~~~  161 (178)
                      ++||.++|++|++++.+|||++|.+|+.+.  +.|+|.+++. +..|.|+|+++++|++||+|||++++++|+
T Consensus       151 ~~GI~v~~~~tk~~l~~~~~~~I~~~~~~~--~~f~I~~~~~~~~~~~~~T~q~~~I~~Li~~Yi~~~~~~r~  221 (222)
T 4f7g_A          151 KECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKK  221 (222)
T ss_dssp             SSEEEEECTTTCCEEEEEEGGGCCEEEECS--SEEEEECCTTSSSCEEEECSCHHHHHHHHHHHHHHTC----
T ss_pred             CCcEEEEcCCCCceeEeccHHHeeeeccCC--CEEEEEECCccceEEEEECCcHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999887  8999999987 567999999999999999999999999876
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B Back     alignment and structure
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A Back     alignment and structure
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A Back     alignment and structure
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A Back     alignment and structure
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A Back     alignment and structure
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A Back     alignment and structure
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A Back     alignment and structure
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A Back     alignment and structure
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus} Back     alignment and structure
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens} Back     alignment and structure
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A Back     alignment and structure
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Back     alignment and structure
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2 Back     alignment and structure
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens} Back     alignment and structure
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A* Back     alignment and structure
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus} Back     alignment and structure
>2kup_A Fibroblast growth factor receptor substrate 3; complex, SNT-2, PTB domain, HALK, structural genomics, signa protein, NPPSFA; NMR {Homo sapiens} PDB: 2ys5_A Back     alignment and structure
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A Back     alignment and structure
>1xr0_B FGFR signalling adaptor SNT-1; phosphotyrosine binding domain, PTB, TRK, NPXPY motif,, signaling protein/growth factor receptor complex; NMR {Homo sapiens} SCOP: b.55.1.2 Back     alignment and structure
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A Back     alignment and structure
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A* Back     alignment and structure
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A Back     alignment and structure
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A* Back     alignment and structure
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A* Back     alignment and structure
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus} Back     alignment and structure
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens} Back     alignment and structure
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A Back     alignment and structure
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens} Back     alignment and structure
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus} Back     alignment and structure
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A Back     alignment and structure
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1 Back     alignment and structure
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis} Back     alignment and structure
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A* Back     alignment and structure
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A Back     alignment and structure
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1 Back     alignment and structure
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae} Back     alignment and structure
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens} Back     alignment and structure
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens} Back     alignment and structure
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0 Back     alignment and structure
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A Back     alignment and structure
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 178
d1mixa292 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus 9e-05
>d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 92 Back     information, alignment and structure

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Third domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 7/88 (7%)

Query: 69  GLTLFVIKPM--GHKKEE--LLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHM 124
           G++ F++K    G  K    LLG+T   +MR++  + + ++ W    +K W  + +   +
Sbjct: 1   GVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASPKSFTL 60

Query: 125 ML-QLTDGNFIFECQSAD--CKVVHEFI 149
                 DG +  +    +   +++  +I
Sbjct: 61  DFGDYQDGYYSVQTTEGEQIAQLIAGYI 88

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query178
d1mixa292 Talin {Chicken (Gallus gallus) [TaxId: 9031]} 99.87
d2al6a1123 Focal adhesion kinase 1 {Chicken (Gallus gallus) [ 99.16
d1j0wa_99 Downstream of tyrosine kinase 5, Dok-5 {Human (Hom 99.08
d1xr0b_129 FGFR substrate 2 (SNT-1) {Human (Homo sapiens) [Ta 99.06
d1h4ra299 Merlin {Human (Homo sapiens) [TaxId: 9606]} 98.79
d1ef1a299 Moesin {Human (Homo sapiens) [TaxId: 9606]} 98.77
d1mixa1114 Talin {Chicken (Gallus gallus) [TaxId: 9031]} 98.75
d1ef1a1111 Moesin {Human (Homo sapiens) [TaxId: 9606]} 98.64
d1h4ra1111 Merlin {Human (Homo sapiens) [TaxId: 9606]} 98.61
d1gg3a1106 Erythroid membrane protein 4.1R {Human (Homo sapie 98.58
d1gg3a292 Erythroid membrane protein 4.1R {Human (Homo sapie 97.94
d1p5ta_107 Docking protein 1, Dok1 {Mouse (Mus musculus) [Tax 97.89
d1qqga2104 Insulin receptor substrate 1, IRS-1 {Human (Homo s 97.66
d1wj1a_156 Numb {Mouse (Mus musculus) [TaxId: 10090]} 97.04
d2cy5a1129 EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) 96.87
d1ntva_152 Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [T 96.55
d1p3ra_148 Disabled homolog 2 (Dab2) {Mouse (Mus musculus) [T 96.13
d1aqca_166 X11 {Human (Homo sapiens) [TaxId: 9606]} 94.8
d1hb6a_86 Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 94.66
d1ddma_135 Numb {Fruit fly (Drosophila melanogaster) [TaxId: 94.56
d2al6a2110 Focal adhesion kinase 1 {Chicken (Gallus gallus) [ 92.94
d1wgua_136 Amyloid beta A4 precursor protein-binding family B 92.74
d1hbka_89 Acyl-CoA binding protein {Plasmodium falciparum [T 92.69
d2dkqa1147 Tensin {Human (Homo sapiens) [TaxId: 9606]} 90.92
d1oy2a_191 Shc adaptor protein {Human (Homo sapiens) [TaxId: 90.57
d1wvha1133 Tensin {Chicken (Gallus gallus) [TaxId: 9031]} 89.3
>d1mixa2 b.55.1.5 (A:309-400) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Third domain of FERM
domain: Talin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.87  E-value=1.1e-22  Score=143.10  Aligned_cols=87  Identities=24%  Similarity=0.527  Sum_probs=79.3

Q ss_pred             ceeEEEEeecCC--CC--ceEEEEcCCcEEEEeCCCCCeEEeeecccccccccccCCceEEEEecCC-CeEEEEecCCHH
Q psy14197         69 GLTLFVIKPMGH--KK--EELLGVTPSRLMRMELSSGDHVRTWRYDTVKAWNVNWEIKHMMLQLTDG-NFIFECQSADCK  143 (178)
Q Consensus        69 G~tfF~Vk~~g~--~~--p~lLGI~~~gv~~id~~tkeil~~~~~s~i~~w~~~~~~~~f~l~fg~~-~~~~~~~T~~~~  143 (178)
                      |++||.||++..  .+  |++||||++||.++|++|++++.+|||+.|++|..+.  +.|++++|+. +..|.++|++++
T Consensus         1 G~~fF~vk~~~~~~~~~~~~lLav~~~gv~lld~~t~~~l~~~py~~Ir~~g~~~--~~F~~~~G~~~~g~~~f~T~q~~   78 (92)
T d1mixa2           1 GVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAASP--KSFTLDFGDYQDGYYSVQTTEGE   78 (92)
T ss_dssp             TCEEEEEEECCSSCSSCEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEECS--SEEEEECGGGSSSCEEEECSCHH
T ss_pred             CCceEEEEEEecCCCCCCCEEEEECcceEEEEcCCCCceEEEcchhheeeccCCC--CEEEEEECCCcceEEEEEeCCHH
Confidence            899999998743  22  6799999999999999999999999999999999877  8899999987 567889999999


Q ss_pred             HHHHHHhhhhhHhh
Q psy14197        144 VVHEFIGGYIFLSM  157 (178)
Q Consensus       144 ~i~~Li~~Yi~l~~  157 (178)
                      +|.+||++||++++
T Consensus        79 eI~~li~~yI~~i~   92 (92)
T d1mixa2          79 QIAQLIAGYIDIIL   92 (92)
T ss_dssp             HHHHHHHTTSCCCC
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999875
>d2al6a1 a.11.2.1 (A:131-253) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1j0wa_ b.55.1.2 (A:) Downstream of tyrosine kinase 5, Dok-5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xr0b_ b.55.1.2 (B:) FGFR substrate 2 (SNT-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h4ra2 b.55.1.5 (A:215-313) Merlin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ef1a2 b.55.1.5 (A:199-297) Moesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mixa1 a.11.2.1 (A:195-308) Talin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1ef1a1 a.11.2.1 (A:88-198) Moesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h4ra1 a.11.2.1 (A:104-214) Merlin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gg3a1 a.11.2.1 (A:82-187) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gg3a2 b.55.1.5 (A:188-279) Erythroid membrane protein 4.1R {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p5ta_ b.55.1.2 (A:) Docking protein 1, Dok1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qqga2 b.55.1.2 (A:159-262) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wj1a_ b.55.1.2 (A:) Numb {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ntva_ b.55.1.2 (A:) Disabled homolog 1 (Dab1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1p3ra_ b.55.1.2 (A:) Disabled homolog 2 (Dab2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1aqca_ b.55.1.2 (A:) X11 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hb6a_ a.11.1.1 (A:) Acyl-CoA binding protein {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ddma_ b.55.1.2 (A:) Numb {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1wgua_ b.55.1.2 (A:) Amyloid beta A4 precursor protein-binding family B member 2, Apbb2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1hbka_ a.11.1.1 (A:) Acyl-CoA binding protein {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2dkqa1 b.55.1.2 (A:8-154) Tensin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1oy2a_ b.55.1.2 (A:) Shc adaptor protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wvha1 b.55.1.2 (A:1606-1738) Tensin {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure