Psyllid ID: psy14230

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTHLPITSLA
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccc
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDlmkdgevyklIGPILVKQEMEEAKQNVKKRIDYISAELkrhddtiatldtkqdthlpitsla
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKeldlmkdgeVYKLIGPILVKQEMEEAKQNVKKRIDYISAElkrhddtiatldtkqdthlpitsla
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTHLPITSLA
**************LFKQCQKEYQKVLN*******************DLMKDGEVYKLIGPILVKQ**********KRIDYISAE*************************
**********************************AQLNENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELK****************LP*TSL*
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTHLPITSLA
MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQ**********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MxxxxxxxxxxxxxxxxxxxxxxxxxxxxRQLLSAQLNENESVQKELDLMKDGEVYKLIGPILVxxxxxxxxxxxxxxxxxxxxxLKRHDDTIATLDTKQDTHLPITSLA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query110 2.2.26 [Sep-21-2011]
Q03958127 Prefoldin subunit 6 OS=Mu yes N/A 0.872 0.755 0.484 7e-18
O15212129 Prefoldin subunit 6 OS=Ho yes N/A 0.872 0.744 0.484 1e-17
Q5TJE6129 Prefoldin subunit 6 OS=Ca yes N/A 0.872 0.744 0.484 1e-17
Q17Q89129 Prefoldin subunit 6 OS=Bo yes N/A 0.872 0.744 0.484 1e-17
Q9VW56125 Probable prefoldin subuni yes N/A 0.827 0.728 0.489 8e-17
A8Y197128 Probable prefoldin subuni N/A N/A 0.836 0.718 0.408 2e-14
P52554126 Probable prefoldin subuni yes N/A 0.836 0.730 0.408 1e-13
Q54M71140 Probable prefoldin subuni yes N/A 0.781 0.614 0.402 3e-09
O14450114 Probable prefoldin subuni yes N/A 0.727 0.701 0.420 2e-08
P52553114 Prefoldin subunit 6 OS=Sa yes N/A 0.709 0.684 0.405 1e-07
>sp|Q03958|PFD6_MOUSE Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=2 SV=1 Back     alignment and function desciption
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 71/99 (71%), Gaps = 3/99 (3%)

Query: 1  MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGE--VYKL 58
          M E +QKKL+ E+  ++Q QK+  K ++ RQ L AQL EN  V++EL L+ DG   V+KL
Sbjct: 1  MAELIQKKLQGEVEKYQQLQKDLSKSMSGRQKLEAQLTENNIVKEELALL-DGSNVVFKL 59

Query: 59 IGPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLD 97
          +GP+LVKQE+ EA+  V KR+DYI+AE+KR++  +  L+
Sbjct: 60 LGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLE 98
Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.
Mus musculus (taxid: 10090)
>sp|O15212|PFD6_HUMAN Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1 Back     alignment and function description
>sp|Q5TJE6|PFD6_CANFA Prefoldin subunit 6 OS=Canis familiaris GN=PFDN6 PE=3 SV=1 Back     alignment and function description
>sp|Q17Q89|PFD6_BOVIN Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1 Back     alignment and function description
>sp|Q9VW56|PFD6_DROME Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=2 SV=1 Back     alignment and function description
>sp|A8Y197|PFD6_CAEBR Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1 Back     alignment and function description
>sp|P52554|PFD6_CAEEL Probable prefoldin subunit 6 OS=Caenorhabditis elegans GN=pfd-6 PE=2 SV=1 Back     alignment and function description
>sp|Q54M71|PFD6_DICDI Probable prefoldin subunit 6 OS=Dictyostelium discoideum GN=pfdn6 PE=3 SV=1 Back     alignment and function description
>sp|O14450|PFD6_SCHPO Probable prefoldin subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3A11.13 PE=3 SV=1 Back     alignment and function description
>sp|P52553|PFD6_YEAST Prefoldin subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKE2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
307206210128 Prefoldin subunit 6 [Harpegnathos saltat 0.936 0.804 0.653 2e-30
340725404132 PREDICTED: prefoldin subunit 6-like [Bom 0.936 0.780 0.625 3e-28
350403907132 PREDICTED: prefoldin subunit 6-like isof 0.936 0.780 0.625 3e-28
350403909129 PREDICTED: prefoldin subunit 6-like isof 0.936 0.798 0.625 3e-28
383861027132 PREDICTED: prefoldin subunit 6-like [Meg 0.936 0.780 0.605 1e-27
156540489126 PREDICTED: prefoldin subunit 6-like isof 0.936 0.817 0.615 1e-27
66525117132 PREDICTED: prefoldin subunit 6-like [Api 0.936 0.780 0.615 1e-27
332022228129 Prefoldin subunit 6 [Acromyrmex echinati 0.963 0.821 0.616 2e-27
291231543130 PREDICTED: HLA class II region expressed 0.927 0.784 0.601 2e-25
242007300128 predicted protein [Pediculus humanus cor 0.918 0.789 0.586 3e-25
>gi|307206210|gb|EFN84290.1| Prefoldin subunit 6 [Harpegnathos saltator] Back     alignment and taxonomy information
 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/104 (65%), Positives = 88/104 (84%), Gaps = 1/104 (0%)

Query: 1   MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMK-DGEVYKLI 59
           MVEE+QKKL++E++  +Q QK+Y K +N+RQ L  QLNEN +V+KELDL+K D +V+KLI
Sbjct: 1   MVEEIQKKLQSEVDKLRQVQKDYSKAVNKRQQLDGQLNENIAVKKELDLLKQDNDVFKLI 60

Query: 60  GPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTH 103
           GP+LVKQ++EEAKQNV KR+DYI+AELKR +D IATLD K DTH
Sbjct: 61  GPVLVKQDLEEAKQNVTKRMDYITAELKRMEDLIATLDKKMDTH 104

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|340725404|ref|XP_003401060.1| PREDICTED: prefoldin subunit 6-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350403907|ref|XP_003486945.1| PREDICTED: prefoldin subunit 6-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|350403909|ref|XP_003486946.1| PREDICTED: prefoldin subunit 6-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383861027|ref|XP_003705988.1| PREDICTED: prefoldin subunit 6-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|156540489|ref|XP_001599529.1| PREDICTED: prefoldin subunit 6-like isoform 1 [Nasonia vitripennis] gi|156540491|ref|XP_001599555.1| PREDICTED: prefoldin subunit 6-like isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|66525117|ref|XP_625185.1| PREDICTED: prefoldin subunit 6-like [Apis mellifera] gi|380016384|ref|XP_003692165.1| PREDICTED: prefoldin subunit 6-like [Apis florea] Back     alignment and taxonomy information
>gi|332022228|gb|EGI62543.1| Prefoldin subunit 6 [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|291231543|ref|XP_002735724.1| PREDICTED: HLA class II region expressed gene KE2-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|242007300|ref|XP_002424479.1| predicted protein [Pediculus humanus corporis] gi|212507897|gb|EEB11741.1| predicted protein [Pediculus humanus corporis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query110
ZFIN|ZDB-GENE-040426-1589126 pfdn6 "prefoldin subunit 6" [D 0.981 0.857 0.440 8e-21
TAIR|locus:2198289129 PFD6 "prefoldin 6" [Arabidopsi 0.909 0.775 0.504 9.2e-20
UNIPROTKB|Q17Q89129 PFDN6 "Prefoldin subunit 6" [B 0.909 0.775 0.466 1.2e-19
UNIPROTKB|Q5TJE6129 PFDN6 "Prefoldin subunit 6" [C 0.909 0.775 0.466 1.2e-19
UNIPROTKB|O15212129 PFDN6 "Prefoldin subunit 6" [H 0.909 0.775 0.466 1.2e-19
UNIPROTKB|F1RZT2129 PFDN6 "Uncharacterized protein 0.909 0.775 0.466 1.2e-19
MGI|MGI:95908127 H2-Ke2 "H2-K region expressed 0.909 0.787 0.466 1.2e-19
RGD|1303006127 Pfdn6 "prefoldin subunit 6" [R 0.909 0.787 0.466 1.2e-19
FB|FBgn0036918125 CG7770 [Drosophila melanogaste 0.881 0.776 0.469 5.1e-19
UNIPROTKB|A2AB88103 PFDN6 "Prefoldin subunit 6" [H 0.772 0.825 0.511 2e-17
ZFIN|ZDB-GENE-040426-1589 pfdn6 "prefoldin subunit 6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 48/109 (44%), Positives = 74/109 (67%)

Query:     1 MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLM-KDGEVYKLI 59
             M E +QKKL+ EL  ++Q QK+  K ++ RQ L AQL EN  V++EL L+     VYKLI
Sbjct:     1 MAEAIQKKLQAELEKYQQLQKDVSKSMSARQKLEAQLTENNIVKEELALLDSQNTVYKLI 60

Query:    60 GPILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTHLPITS 108
             GP+LVKQ+++EAK  V KR++YI+ E++R++  +  ++ K + H  + S
Sbjct:    61 GPVLVKQDLDEAKATVGKRLEYINGEIQRYETLLKEMERKSEQHREVLS 109
GO:0006457 "protein folding" evidence=IEA
GO:0016272 "prefoldin complex" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IEA
TAIR|locus:2198289 PFD6 "prefoldin 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q17Q89 PFDN6 "Prefoldin subunit 6" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q5TJE6 PFDN6 "Prefoldin subunit 6" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O15212 PFDN6 "Prefoldin subunit 6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZT2 PFDN6 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:95908 H2-Ke2 "H2-K region expressed gene 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1303006 Pfdn6 "prefoldin subunit 6" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0036918 CG7770 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|A2AB88 PFDN6 "Prefoldin subunit 6" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P52554PFD6_CAEELNo assigned EC number0.40860.83630.7301yesN/A
Q17Q89PFD6_BOVINNo assigned EC number0.48480.87270.7441yesN/A
Q54M71PFD6_DICDINo assigned EC number0.40220.78180.6142yesN/A
Q5TJE6PFD6_CANFANo assigned EC number0.48480.87270.7441yesN/A
P52553PFD6_YEASTNo assigned EC number0.40500.70900.6842yesN/A
O14450PFD6_SCHPONo assigned EC number0.42040.72720.7017yesN/A
Q03958PFD6_MOUSENo assigned EC number0.48480.87270.7559yesN/A
O15212PFD6_HUMANNo assigned EC number0.48480.87270.7441yesN/A
Q9VW56PFD6_DROMENo assigned EC number0.48910.82720.728yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
cd00632105 cd00632, Prefoldin_beta, Prefoldin beta; Prefoldin 6e-13
COG1382119 COG1382, GimC, Prefoldin, chaperonin cofactor [Pos 1e-08
pfam01920106 pfam01920, Prefoldin_2, Prefoldin subunit 2e-08
TIGR02338110 TIGR02338, gimC_beta, prefoldin, beta subunit, arc 3e-04
>gnl|CDD|238345 cd00632, Prefoldin_beta, Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea Back     alignment and domain information 
 Score = 59.3 bits (144), Expect = 6e-13
 Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 1/81 (1%)

Query: 9  LENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMK-DGEVYKLIGPILVKQE 67
          ++ +L   +Q Q++ Q  + QRQ + AQLNEN+   +EL+ +  D EVYKL+G +LVKQE
Sbjct: 1  VQEQLAQLQQLQQQLQAYIVQRQKVEAQLNENKKALEELEKLADDAEVYKLVGNVLVKQE 60

Query: 68 MEEAKQNVKKRIDYISAELKR 88
           EEA+  +K+R++ I   +KR
Sbjct: 61 KEEARTELKERLETIELRIKR 81

Prefoldin binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The hexameric structure consists of a double beta barrel assembly with six protruding coiled-coils. The alpha prefoldin subunits have two beta hairpin structures while the beta prefoldin subunits (this CD) have only one hairpin that is most similar to the second hairpin of the alpha subunit. The prefoldin hexamer consists of two alpha and four beta subunits and is assembled from the beta hairpins of all six subunits. The alpha subunits initially dimerize providing a structural nucleus for the assembly of the beta subunits. In archaea, there is usually only one gene for each subunit while in eukaryotes there two or more paralogous genes encoding each subunit adding heterogeneity to the structure of the hexamer. Length = 105
>gnl|CDD|224300 COG1382, GimC, Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|202045 pfam01920, Prefoldin_2, Prefoldin subunit Back     alignment and domain information
>gnl|CDD|131391 TIGR02338, gimC_beta, prefoldin, beta subunit, archaeal Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 110
PRK09343121 prefoldin subunit beta; Provisional 99.95
KOG3478|consensus120 99.95
TIGR02338110 gimC_beta prefoldin, beta subunit, archaeal. Chape 99.95
COG1382119 GimC Prefoldin, chaperonin cofactor [Posttranslati 99.95
KOG4098|consensus140 99.92
cd00632105 Prefoldin_beta Prefoldin beta; Prefoldin is a hexa 99.92
PF01920106 Prefoldin_2: Prefoldin subunit; InterPro: IPR00277 99.85
cd00890129 Prefoldin Prefoldin is a hexameric molecular chape 99.5
KOG1760|consensus131 99.41
PRK03947140 prefoldin subunit alpha; Reviewed 99.36
TIGR00293126 prefoldin, archaeal alpha subunit/eukaryotic subun 99.24
cd00584129 Prefoldin_alpha Prefoldin alpha subunit; Prefoldin 99.07
PRK14011144 prefoldin subunit alpha; Provisional 98.65
COG1730145 GIM5 Predicted prefoldin, molecular chaperone impl 98.61
PF02996120 Prefoldin: Prefoldin subunit; InterPro: IPR004127 98.04
KOG3501|consensus114 97.58
COG1382119 GimC Prefoldin, chaperonin cofactor [Posttranslati 97.51
PRK01203130 prefoldin subunit alpha; Provisional 97.46
cd00632105 Prefoldin_beta Prefoldin beta; Prefoldin is a hexa 96.77
PRK09343121 prefoldin subunit beta; Provisional 96.34
TIGR02338110 gimC_beta prefoldin, beta subunit, archaeal. Chape 96.23
PF01920106 Prefoldin_2: Prefoldin subunit; InterPro: IPR00277 96.13
PRK03947140 prefoldin subunit alpha; Reviewed 95.68
PF1375899 Prefoldin_3: Prefoldin subunit 95.64
COG1730145 GIM5 Predicted prefoldin, molecular chaperone impl 95.25
PF1471292 Snapin_Pallidin: Snapin/Pallidin 94.82
TIGR00293126 prefoldin, archaeal alpha subunit/eukaryotic subun 94.59
cd00890129 Prefoldin Prefoldin is a hexameric molecular chape 93.48
PRK11637 428 AmiB activator; Provisional 92.03
PF0894646 Osmo_CC: Osmosensory transporter coiled coil; Inte 91.94
PRK03918 880 chromosome segregation protein; Provisional 91.33
PRK03918 880 chromosome segregation protein; Provisional 90.09
PRK02224 880 chromosome segregation protein; Provisional 89.99
COG1579 239 Zn-ribbon protein, possibly nucleic acid-binding [ 89.91
PRK11637 428 AmiB activator; Provisional 89.53
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 88.29
PRK0073668 hypothetical protein; Provisional 88.01
KOG3048|consensus153 87.7
PRK0029568 hypothetical protein; Provisional 86.75
PF0410269 SlyX: SlyX; InterPro: IPR007236 The SlyX protein h 86.75
KOG3313|consensus187 86.3
PRK14011144 prefoldin subunit alpha; Provisional 86.1
PHA0175075 hypothetical protein 85.99
PRK0432574 hypothetical protein; Provisional 85.56
PF00261237 Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop 85.44
PRK01156 895 chromosome segregation protein; Provisional 84.89
PHA02562 562 46 endonuclease subunit; Provisional 84.8
COG5293 591 Predicted ATPase [General function prediction only 83.71
PRK0440675 hypothetical protein; Provisional 83.47
KOG0976|consensus 1265 83.47
PRK0279372 phi X174 lysis protein; Provisional 83.46
PRK00888105 ftsB cell division protein FtsB; Reviewed 83.26
PRK0211973 hypothetical protein; Provisional 83.11
PF10303134 DUF2408: Protein of unknown function (DUF2408); In 82.45
PF05816 333 TelA: Toxic anion resistance protein (TelA); Inter 81.51
PF13118126 DUF3972: Protein of unknown function (DUF3972) 81.38
>PRK09343 prefoldin subunit beta; Provisional Back     alignment and domain information 
Probab=99.95  E-value=2.3e-27  Score=162.51  Aligned_cols=108  Identities=20%  Similarity=0.386  Sum_probs=105.8

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHhhcchhHhccHHHHHHHHHHhH
Q psy14230          1 MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMK-DGEVYKLIGPILVKQEMEEAKQNVKKRI   79 (110)
Q Consensus         1 m~~~~~~~~Q~~i~~~q~lq~~l~~l~~~~~~le~q~~E~~~v~eeL~~l~-d~~~yKlVG~vLV~~~~~ea~~~l~~r~   79 (110)
                      |+.+|||++|+.+++|+.++++++.+..+++.++.+++|++.|++||+.++ |++|||+|||+||++|+++|+.+|++|+
T Consensus         1 ~~~~~~~~~q~~~~~~q~lq~~l~~~~~q~~~le~q~~e~~~~~~EL~~L~~d~~VYk~VG~vlv~qd~~e~~~~l~~r~   80 (121)
T PRK09343          1 MAENIPPEVQAQLAQLQQLQQQLERLLQQKSQIDLELREINKALEELEKLPDDTPIYKIVGNLLVKVDKTKVEKELKERK   80 (121)
T ss_pred             ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHhhHHHhhccHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchhc
Q psy14230         80 DYISAELKRHDDTIATLDTKQDTHLPITS  108 (110)
Q Consensus        80 e~i~~~i~~l~~~~~~~~~~l~e~k~~l~  108 (110)
                      ++|+.++++++++...+++++.+++..|.
T Consensus        81 E~ie~~ik~lekq~~~l~~~l~e~q~~l~  109 (121)
T PRK09343         81 ELLELRSRTLEKQEKKLREKLKELQAKIN  109 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988775

>KOG3478|consensus Back     alignment and domain information
>TIGR02338 gimC_beta prefoldin, beta subunit, archaeal Back     alignment and domain information
>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4098|consensus Back     alignment and domain information
>cd00632 Prefoldin_beta Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea Back     alignment and domain information
>PF01920 Prefoldin_2: Prefoldin subunit; InterPro: IPR002777 Prefoldin (PFD) is a chaperone that interacts exclusively with type II chaperonins, hetero-oligomers lacking an obligate co-chaperonin that are found only in eukaryotes (chaperonin-containing T-complex polypeptide-1 (CCT)) and archaea Back     alignment and domain information
>cd00890 Prefoldin Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly Back     alignment and domain information
>KOG1760|consensus Back     alignment and domain information
>PRK03947 prefoldin subunit alpha; Reviewed Back     alignment and domain information
>TIGR00293 prefoldin, archaeal alpha subunit/eukaryotic subunit 5 Back     alignment and domain information
>cd00584 Prefoldin_alpha Prefoldin alpha subunit; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly Back     alignment and domain information
>PRK14011 prefoldin subunit alpha; Provisional Back     alignment and domain information
>COG1730 GIM5 Predicted prefoldin, molecular chaperone implicated in de novo protein folding [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02996 Prefoldin: Prefoldin subunit; InterPro: IPR004127 This entry comprises of several prefoldin subunits Back     alignment and domain information
>KOG3501|consensus Back     alignment and domain information
>COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK01203 prefoldin subunit alpha; Provisional Back     alignment and domain information
>cd00632 Prefoldin_beta Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea Back     alignment and domain information
>PRK09343 prefoldin subunit beta; Provisional Back     alignment and domain information
>TIGR02338 gimC_beta prefoldin, beta subunit, archaeal Back     alignment and domain information
>PF01920 Prefoldin_2: Prefoldin subunit; InterPro: IPR002777 Prefoldin (PFD) is a chaperone that interacts exclusively with type II chaperonins, hetero-oligomers lacking an obligate co-chaperonin that are found only in eukaryotes (chaperonin-containing T-complex polypeptide-1 (CCT)) and archaea Back     alignment and domain information
>PRK03947 prefoldin subunit alpha; Reviewed Back     alignment and domain information
>PF13758 Prefoldin_3: Prefoldin subunit Back     alignment and domain information
>COG1730 GIM5 Predicted prefoldin, molecular chaperone implicated in de novo protein folding [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF14712 Snapin_Pallidin: Snapin/Pallidin Back     alignment and domain information
>TIGR00293 prefoldin, archaeal alpha subunit/eukaryotic subunit 5 Back     alignment and domain information
>cd00890 Prefoldin Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF08946 Osmo_CC: Osmosensory transporter coiled coil; InterPro: IPR015041 The osmosensory transporter coiled coil is a C-terminal domain found in various bacterial osmoprotective transporters, such as ProP, Proline/betaine transporter, Proline permease 2 and the citrate proton symporters Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PRK03918 chromosome segregation protein; Provisional Back     alignment and domain information
>PRK02224 chromosome segregation protein; Provisional Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK00736 hypothetical protein; Provisional Back     alignment and domain information
>KOG3048|consensus Back     alignment and domain information
>PRK00295 hypothetical protein; Provisional Back     alignment and domain information
>PF04102 SlyX: SlyX; InterPro: IPR007236 The SlyX protein has no known function Back     alignment and domain information
>KOG3313|consensus Back     alignment and domain information
>PRK14011 prefoldin subunit alpha; Provisional Back     alignment and domain information
>PHA01750 hypothetical protein Back     alignment and domain information
>PRK04325 hypothetical protein; Provisional Back     alignment and domain information
>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK01156 chromosome segregation protein; Provisional Back     alignment and domain information
>PHA02562 46 endonuclease subunit; Provisional Back     alignment and domain information
>COG5293 Predicted ATPase [General function prediction only] Back     alignment and domain information
>PRK04406 hypothetical protein; Provisional Back     alignment and domain information
>KOG0976|consensus Back     alignment and domain information
>PRK02793 phi X174 lysis protein; Provisional Back     alignment and domain information
>PRK00888 ftsB cell division protein FtsB; Reviewed Back     alignment and domain information
>PRK02119 hypothetical protein; Provisional Back     alignment and domain information
>PF10303 DUF2408: Protein of unknown function (DUF2408); InterPro: IPR018810 This entry represents a family of proteins conserved in fungi whose function is unknown Back     alignment and domain information
>PF05816 TelA: Toxic anion resistance protein (TelA); InterPro: IPR008863 This family consists of several prokaryotic TelA like proteins Back     alignment and domain information
>PF13118 DUF3972: Protein of unknown function (DUF3972) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query110
2zqm_A117 Prefoldin beta subunit 1; chaperone; HET: CIT; 1.9 2e-07
1fxk_A107 Prefoldin; archaeal protein, chaperone; 2.30A {Met 9e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A Length = 117 Back     alignment and structure
 Score = 44.9 bits (106), Expect = 2e-07
 Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 3   EEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELD-LMKDGEVYKLIGP 61
           + +  +++  L   +  Q++ Q V+ Q+Q +  +L E +    E++ L  D  VYK +G 
Sbjct: 2   QNIPPQVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGT 61

Query: 62  ILVKQEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQD 101
           ++VK   ++A   +K++I+ +   L   +     L+ K  
Sbjct: 62  LIVKTTKDKAVAELKEKIETLEVRLNALERQEKKLNEKLK 101
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B Length = 107 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
2zqm_A117 Prefoldin beta subunit 1; chaperone; HET: CIT; 1.9 99.94
1fxk_A107 Prefoldin; archaeal protein, chaperone; 2.30A {Met 99.94
2zdi_C151 Prefoldin subunit alpha; chaperone, cytoplasm; 3.0 99.42
1fxk_C133 Protein (prefoldin); archaeal protein, chaperone; 99.12
3aei_A99 Prefoldin beta subunit 2; double helix, coiled coi 98.12
1l8d_A112 DNA double-strand break repair RAD50 ATPase; zinc 96.94
1fxk_A107 Prefoldin; archaeal protein, chaperone; 2.30A {Met 95.72
2zqm_A117 Prefoldin beta subunit 1; chaperone; HET: CIT; 1.9 95.4
3na7_A 256 HP0958; flagellar biogenesis, flagellum export, C4 94.25
2pnv_A43 Small conductance calcium-activated potassium chan 92.0
1go4_E100 MAD1 (mitotic arrest deficient)-like 1; mitotic sp 85.65
2yny_A106 General control protein GCN4, putative inner MEMB 84.31
3efg_A78 Protein SLYX homolog; xanthomonas campestris PV. c 83.8
3nmd_A72 CGMP dependent protein kinase; leucine zipper, coi 80.92
1t2k_D61 Cyclic-AMP-dependent transcription factor ATF-2; p 80.89
3ghg_A 562 Fibrinogen alpha chain; triple-stranded coiled coi 80.74
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A Back     alignment and structure
Probab=99.94  E-value=9.4e-27  Score=155.86  Aligned_cols=107  Identities=21%  Similarity=0.365  Sum_probs=104.1

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHhhcchhHhccHHHHHHHHHHhH
Q psy14230          1 MVEEVQKKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMK-DGEVYKLIGPILVKQEMEEAKQNVKKRI   79 (110)
Q Consensus         1 m~~~~~~~~Q~~i~~~q~lq~~l~~l~~~~~~le~q~~E~~~v~eeL~~l~-d~~~yKlVG~vLV~~~~~ea~~~l~~r~   79 (110)
                      |. ++||++|+.+++|++++++++.+.+++..++.++++|+.|++||+.++ |++||++||||||++|+++|.+.|++|+
T Consensus         1 m~-~~~~e~Q~~i~~~~~l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~iG~vfv~~~~~ea~~~L~~~~   79 (117)
T 2zqm_A            1 MQ-NIPPQVQAMLGQLESYQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTVGTLIVKTTKDKAVAELKEKI   79 (117)
T ss_dssp             CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEETTEEEEECHHHHHHHHHHHH
T ss_pred             CC-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHhhHHHhhccHHHHHHHHHHHH
Confidence            54 899999999999999999999999999999999999999999999999 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchhc
Q psy14230         80 DYISAELKRHDDTIATLDTKQDTHLPITS  108 (110)
Q Consensus        80 e~i~~~i~~l~~~~~~~~~~l~e~k~~l~  108 (110)
                      ++|+..++++++++..+++++.+++..|.
T Consensus        80 e~ie~~i~~le~~~~~l~~~l~~lk~~l~  108 (117)
T 2zqm_A           80 ETLEVRLNALERQEKKLNEKLKELTAQIQ  108 (117)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998764
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B Back     alignment and structure
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 Back     alignment and structure
>3aei_A Prefoldin beta subunit 2; double helix, coiled coil, chaperone; 1.70A {Thermococcus SP} Back     alignment and structure
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1 Back     alignment and structure
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B Back     alignment and structure
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A Back     alignment and structure
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} Back     alignment and structure
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus} Back     alignment and structure
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1 Back     alignment and structure
>2yny_A General control protein GCN4, putative inner MEMB protein; FGG domain, trimeric autotransporter adhesin, TAA, membrane chimera; 1.35A {Saccharomyces cerevisiae} PDB: 1w5i_A Back     alignment and structure
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV} Back     alignment and structure
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens} Back     alignment and structure
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1 Back     alignment and structure
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 110
d1fxka_107 a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Meth 5e-09
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 107 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Prefoldin
family: Prefoldin
domain: Prefoldin beta subunit
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score = 47.9 bits (114), Expect = 5e-09
 Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 7   KKLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMKDGE-VYKLIGPILVK 65
           + ++++L  F+Q Q++ Q +  Q+Q +  Q+NE +   +EL    D   VYK  G IL++
Sbjct: 1   QNVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIR 60

Query: 66  QEMEEAKQNVKKRIDYISAELKRHDDTIATLDTKQDTH 103
              +E  + ++++++ +    K  +     +  K    
Sbjct: 61  VAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEM 98

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query110
d1fxka_107 Prefoldin beta subunit {Archaeon Methanobacterium 99.94
d1fxkc_133 Prefoldin alpha subunit {Archaeon Methanobacterium 98.68
d1fxka_107 Prefoldin beta subunit {Archaeon Methanobacterium 95.88
d1fxkc_133 Prefoldin alpha subunit {Archaeon Methanobacterium 87.19
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Prefoldin
family: Prefoldin
domain: Prefoldin beta subunit
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=99.94  E-value=4.1e-27  Score=155.24  Aligned_cols=102  Identities=23%  Similarity=0.317  Sum_probs=99.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHhhcchhHhccHHHHHHHHHHhHHHHHHHH
Q psy14230          8 KLENELNLFKQCQKEYQKVLNQRQLLSAQLNENESVQKELDLMK-DGEVYKLIGPILVKQEMEEAKQNVKKRIDYISAEL   86 (110)
Q Consensus         8 ~~Q~~i~~~q~lq~~l~~l~~~~~~le~q~~E~~~v~eeL~~l~-d~~~yKlVG~vLV~~~~~ea~~~l~~r~e~i~~~i   86 (110)
                      .+|+.+++|++++++++.+.+++++++++++||+.|++||+.+| |++|||+||||||++|++++.++|++++++|+.++
T Consensus         2 ~lqe~~~~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~~l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i   81 (107)
T d1fxka_           2 NVQHQLAQFQQLQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLRE   81 (107)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999999999 99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcchhcc
Q psy14230         87 KRHDDTIATLDTKQDTHLPITSL  109 (110)
Q Consensus        87 ~~l~~~~~~~~~~l~e~k~~l~~  109 (110)
                      ++++++++.+++++.++++.|.-
T Consensus        82 ~~l~~q~~~l~~~l~~~~~~l~~  104 (107)
T d1fxka_          82 KTIERQEERVMKKLQEMQVNIQE  104 (107)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998864
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure