Psyllid ID: psy14373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-----
Protein Sequence
MVFRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLCRSMPMSSVS
Secondary Structure (PSIPRED)
cEEEEEcccccHHHHHHcEEEEEcccccEEEEEccccccccccccccEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccHHHHHHHHHHHEEEcccccEEEEEEEEcccccccccccEEEEccccccccccccccc
Coil and Loop (DISEMBL)
MVFRILTHTQSLIQCQrvqslrvpsaaklnlhdfkfddihmedddtlkvrsncglcrsmpmssvs
Flexible Loop (DISEMBL)
mvfrilthtqsliqcqrvqslRVPSAAKLNLHDFKFDDIHMEDDDTLKVRsncglcrsmpmssvs
Low Complexity Region (SEG)
MVFRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLCRSMPMSSVS
Disordered region (IsUnstruct)
**FRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGL**********
Disordered Region (DISOPRED)
MVFRI**HTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLCRSMPM****
Disordered Region (DISEMBL)
MVFRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLCRSMPMSSVS
Disordered Region (DISPRO)
MVFRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLC*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVFRILTHTQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKVRSNCGLCRSMPMSSVS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	65	2.2.26 [Sep-21-2011]
Q9VJ79	1451	Dual 3',5'-cyclic-AMP and	yes	N/A	0.507	0.022	0.666	8e-08

>sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 OS=Drosophila melanogaster GN=Pde11 PE=1 SV=4

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 14  QCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKV 49
           +  R++ LRVPSA    LHDFKFDDIH EDDDTLK 
Sbjct: 787 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKA 822

Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides cAMP and cGMP. Catalyzes the hydrolysis of both cAMP and cGMP to 5'-AMP and 5'-GMP, respectively.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 3EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
383851028	1004	PREDICTED: dual 3',5'-cyclic-AMP and -GM	0.553	0.035	0.692	2e-07
340720331	978	PREDICTED: dual 3',5'-cyclic-AMP and -GM	0.553	0.036	0.692	3e-07
332027549	828	Dual 3',5'-cyclic-AMP and -GMP phosphodi	0.553	0.043	0.666	8e-07
350405537	978	PREDICTED: dual 3',5'-cyclic-AMP and -GM	0.553	0.036	0.666	1e-06
328786557	961	PREDICTED: dual 3',5'-cyclic-AMP and -GM	0.553	0.037	0.666	1e-06
380017646	941	PREDICTED: dual 3',5'-cyclic-AMP and -GM	0.553	0.038	0.666	1e-06
21483598	1544	SD13096p [Drosophila melanogaster]	0.507	0.021	0.666	3e-06
307191290	972	Dual 3',5'-cyclic-AMP and -GMP phosphodi	0.553	0.037	0.641	3e-06
322794650	625	hypothetical protein SINV_16524 [Solenop	0.261	0.027	0.641	3e-06
161076953	1451	phosphodiesterase 11, isoform B [Drosoph	0.507	0.022	0.666	3e-06

>gi|383851028|ref|XP_003701055.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like [Megachile rotundata]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 31/39 (79%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++ LRVPS+A   LHDFKFDDIHMEDDDTL
Sbjct: 652 SASLEDAQRLRGLRVPSSAHFQLHDFKFDDIHMEDDDTL 690

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720331|ref|XP_003398594.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like [Bombus terrestris]

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 30/39 (76%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++ LRVPSAA   LHDFKFDDIHMEDD TL
Sbjct: 626 SASLEDAQRLRGLRVPSAAYFKLHDFKFDDIHMEDDQTL 664

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027549|gb|EGI67624.1| Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 [Acromyrmex echinatior]

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR+++LRVPS+A   LHDFKFDDIHMED DTL
Sbjct: 453 SASLEDAQRLKNLRVPSSAHFQLHDFKFDDIHMEDGDTL 491

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350405537|ref|XP_003487467.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like [Bombus impatiens]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 30/39 (76%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++ LRVPSAA   LHDFKFDDIHMED+ TL
Sbjct: 626 SASLEDAQRLRGLRVPSAAYFKLHDFKFDDIHMEDNQTL 664

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786557|ref|XP_003250812.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like [Apis mellifera]

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 30/39 (76%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++ LRVPSAA   LHDFKFDDI+MEDD TL
Sbjct: 611 SASLEDAQRLRGLRVPSAAHFQLHDFKFDDIYMEDDQTL 649

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017646|ref|XP_003692760.1| PREDICTED: dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11-like [Apis florea]

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 30/39 (76%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++ LRVPSAA   LHDFKFDDI+MEDD TL
Sbjct: 592 SASLEDAQRLRGLRVPSAAHFQLHDFKFDDIYMEDDQTL 630

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|21483598|gb|AAM52774.1| SD13096p [Drosophila melanogaster]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 14  QCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKV 49
           +  R++ LRVPSA    LHDFKFDDIH EDDDTLK 
Sbjct: 878 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKA 913

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307191290|gb|EFN74937.1| Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 [Camponotus floridanus]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 31/39 (79%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++SLRVPS+    LHDFKFDDI+M+DDDTL
Sbjct: 618 SASLEDAQRLRSLRVPSSVHFKLHDFKFDDIYMQDDDTL 656

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794650|gb|EFZ17657.1| hypothetical protein SINV_16524 [Solenopsis invicta]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 31/39 (79%)

Query: 9   TQSLIQCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTL 47
           + SL   QR++SLR+PS+A   LHDFKFDDIHMED +TL
Sbjct: 307 SASLEDAQRLRSLRIPSSAHFELHDFKFDDIHMEDVETL 345

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161076953|ref|NP_609885.2| phosphodiesterase 11, isoform B [Drosophila melanogaster] gi|166215087|sp|Q9VJ79.4|PDE11_DROME RecName: Full=Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11; AltName: Full=cAMP and cGMP phosphodiesterase 11 gi|157400181|gb|AAF53675.3| phosphodiesterase 11, isoform B [Drosophila melanogaster]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%)

Query: 14  QCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLKV 49
           +  R++ LRVPSA    LHDFKFDDIH EDDDTLK 
Sbjct: 787 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKA 822

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	65
FB|FBgn0085370	1451	Pde11 "Phosphodiesterase 11" [	0.538	0.024	0.685	3.7e-07

FB|FBgn0085370 Pde11 "Phosphodiesterase 11" [Drosophila melanogaster (taxid:7227)]

 Score = 131 (51.2 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 24/35 (68%), Positives = 27/35 (77%)

Query:    14 QCQRVQSLRVPSAAKLNLHDFKFDDIHMEDDDTLK 48
             +  R++ LRVPSA    LHDFKFDDIH EDDDTLK
Sbjct:   787 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLK 821

GO:0047555 "3',5'-cyclic-GMP phosphodiesterase activity" evidence=ISS;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0004115 "3',5'-cyclic-AMP phosphodiesterase activity" evidence=ISS;IDA

GO:0007165 "signal transduction" evidence=IEA

GO:0046058 "cAMP metabolic process" evidence=IDA

GO:0046068 "cGMP metabolic process" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VJ79	PDE11_DROME	3, ., 1, ., 4, ., 3, 5	0.6666	0.5076	0.0227	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	65
3itu_A	345	CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-	95.5
1tbf_A	347	CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5	85.74

>3itu_A CGMP-dependent 3',5'-cyclic phosphodiesterase; Zn-binding, all-alpha-helical, alternative splicing, hydrolase, membrane, polymorphism; HET: IBM; 1.58A {Homo sapiens} PDB: 3itm_A* 1z1l_A

Probab=95.50  E-value=0.004  Score=45.59  Aligned_cols=43  Identities=14%  Similarity=0.139  Sum_probs=36.2

Q ss_pred             hcCHHHHHHHHHhccCCccc--cccccccCCceeccccceeeeec
Q psy14373          9 TQSLIQCQRVQSLRVPSAAK--LNLHDFKFDDIHMEDDDTLKVRS   51 (65)
Q Consensus         9 taSl~e~qRl~vllVpsa~~--~~lfDfeFdD~~lSdddTl~a~~   51 (65)
                      +++.+|++|+++.-||+...  ..+.+|.|++++++++|++++..
T Consensus         2 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~F~~~~l~~~e~~~~~~   46 (345)
T 3itu_A            2 SAMDDEYTKLLHDGIQPVAAIDSNFASFTYTPRSLPEDDTSMAIL   46 (345)
T ss_dssp             ---CHHHHHHHHSCCCCGGGTCTTTTSTTCCGGGSCGGGHHHHHH
T ss_pred             CCCHHHHHHHHhcCCCChhhccCCcCeeeecCCCCCchHHHHHHH
Confidence            68999999999999999776  57999999999999999998765

>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase; HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB: 1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A* 3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A* 2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...

Probab=85.74  E-value=0.12  Score=37.58  Aligned_cols=41  Identities=32%  Similarity=0.458  Sum_probs=33.3

Q ss_pred             hcCHHHHHHHHH---hccCCccccccccccCCceeccccceeee
Q psy14373          9 TQSLIQCQRVQS---LRVPSAAKLNLHDFKFDDIHMEDDDTLKV   49 (65)
Q Consensus         9 taSl~e~qRl~v---llVpsa~~~~lfDfeFdD~~lSdddTl~a   49 (65)
                      +++.+|++|++.   ..+|++...++.++.|+.+++++++.+++
T Consensus        19 ~~~~~e~~~l~~~~~~~lp~~~~~~l~~w~Fd~~~l~~~~~~~~   62 (347)
T 1tbf_A           19 SHMEEETRELQSLAAAVVPSAQTLKITDFSFSDFELSDLETALC   62 (347)
T ss_dssp             ---CHHHHHHHHHHHSCCCCHHHHTTTCTTCCCTTCCHHHHHHH
T ss_pred             cCCHHHHHHHhhcccccCChhhhcCCCCCCCCcccCCchhHHHH
Confidence            578999999996   45899888999999999999998887654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00