Psyllid ID: psy14478

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDLGNT
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHEEEcccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccEEccccccccccccEEEEEEcccccccHHHHHHHHHHHHcHHHcccccccccc
Coil and Loop (DISEMBL)
MGDKKTEEAILIFAVPGSWFLLMFFAGairltgpfVTMAFYFLYkgfpgvktsLYSSYLSTWMALFQITlgdynypelsytvyptMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYsiklgpgdepgteqrgvlviksktapeepapkfEAFSAALDVMAFthdidlgnt
Flexible Loop (DISEMBL)
MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYsiklgpgdepgtEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDLGNT
Low Complexity Region (SEG)
MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDLGNT
Disordered region (IsUnstruct)
********AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL******************************AFSAALDVMAFTHD******
Disordered Region (DISOPRED)
**DKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVL********************************L***
Disordered Region (DISEMBL)
MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDLGNT
Disordered Region (DISPRO)
*GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPKFEAFSAALDVMAFTHDIDLGNT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q9HBA0	871	Transient receptor potent	no	N/A	0.621	0.146	0.257	6e-10
Q9ERZ8	871	Transient receptor potent	yes	N/A	0.621	0.146	0.245	4e-09
Q9EPK8	871	Transient receptor potent	yes	N/A	0.621	0.146	0.245	4e-09
Q8K424	791	Transient receptor potent	no	N/A	0.432	0.112	0.344	2e-07
Q8NET8	790	Transient receptor potent	no	N/A	0.432	0.112	0.344	2e-07
Q9R186	727	Transient receptor potent	no	N/A	0.631	0.178	0.270	5e-07
Q9H1D0	725	Transient receptor potent	no	N/A	0.631	0.179	0.245	6e-07
Q9XSM3	730	Transient receptor potent	yes	N/A	0.621	0.175	0.248	6e-07
P69744	723	Transient receptor potent	no	N/A	0.582	0.165	0.241	8e-07
Q91WD2	727	Transient receptor potent	no	N/A	0.631	0.178	0.264	9e-07

>sp|Q9HBA0|TRPV4_HUMAN Transient receptor potential cation channel subfamily V member 4 OS=Homo sapiens GN=TRPV4 PE=1 SV=2

 Score = 64.3 bits (155), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 47/175 (26%)

Query: 9   AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---------------------- 46
           A+++FA+   W   ++F   ++LTG +  M    L+K                       
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSL 635

Query: 47  ---------------------FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
                                +P  + S  +S++L   + LF++T+G  +   LS T YP
Sbjct: 636 LNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYP 692

Query: 85  TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
            +  I+   +++L  +LLLNMLIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct: 693 VVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

Non-selective calcium permeant cation channel probably involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by low pH, citrate and phorbol esters. Increase of intracellular Ca(2+) potentiates currents. Channel activity seems to be regulated by a calmodulin-dependent mechanism with a negative feedback mechanism. Promotes cell-cell junction formation in skin keratinocytes and plays an important role in the formation and/or maintenance of functional intercellular barriers. Acts as a regulator of intracellular Ca(2+) in synoviocytes. Plays an obligatory role as a molecular component in the nonselective cation channel activation induced by 4-alpha-phorbol 12,13-didecanoate and hypotonic stimulation in synoviocytes and also regulates production of IL-8.
Homo sapiens (taxid: 9606)

>sp|Q9ERZ8|TRPV4_RAT Transient receptor potential cation channel subfamily V member 4 OS=Rattus norvegicus GN=Trpv4 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 47/175 (26%)

Query: 9   AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYK----------------------- 45
           A+++FA+   W   ++F   ++LTG +  M    L+K                       
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVTL 635

Query: 46  --------------------GFPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
                                +P  + S  +S++L   + LF++T+G  +   LS   YP
Sbjct: 636 LNPCTNMKVCNEDQSNCTVPSYPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYP 692

Query: 85  TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
            +  ++   +++L  +LLLNMLIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct: 693 VVFILLLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

Non-selective calcium permeant cation channel probably involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by low pH, citrate and phorbol esters. Increase of intracellular Ca(2+) potentiates currents. Channel activity seems to be regulated by a calmodulin-dependent mechanism with a negative feedback mechanism. Acts as a regulator of intracellular Ca(2+) in synoviocytes. Plays an obligatory role as a molecular component in the nonselective cation channel activation induced by 4-alpha-phorbol 12,13-didecanoate and hypotonic stimulation in synoviocytes and also regulates production of IL-8 (By similarity). Promotes cell-cell junction formation in skin keratinocytes and plays an important role in the formation and/or maintenance of functional intercellular barriers.

Rattus norvegicus (taxid: 10116)

>sp|Q9EPK8|TRPV4_MOUSE Transient receptor potential cation channel subfamily V member 4 OS=Mus musculus GN=Trpv4 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 47/175 (26%)

Query: 9   AILIFAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---------------------- 46
           A+++FA+   W   ++F   ++LTG +  M    L+K                       
Sbjct: 576 AVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVTL 635

Query: 47  ---------------------FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYP 84
                                +P  + S  +S++L   + LF++T+G  +   LS   YP
Sbjct: 636 LNPCTNMKVCDEDQSNCTVPTYPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYP 692

Query: 85  TMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
            +  ++   +++L  +LLLNMLIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct: 693 VVFILLLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

Non-selective calcium permeant cation channel probably involved in osmotic sensitivity and mechanosensitivity. Activation by exposure to hypotonicity within the physiological range exhibits an outward rectification. Also activated by low pH, citrate and phorbol esters. Increase of intracellular Ca(2+) potentiates currents. Channel activity seems to be regulated by a calmodulin-dependent mechanism with a negative feedback mechanism. Acts as a regulator of intracellular Ca(2+) in synoviocytes. Plays an obligatory role as a molecular component in the nonselective cation channel activation induced by 4-alpha-phorbol 12,13-didecanoate and hypotonic stimulation in synoviocytes and also regulates production of IL-8 (By similarity). Promotes cell-cell junction formation in skin keratinocytes and plays an important role in the formation and/or maintenance of functional intercellular barriers.

Mus musculus (taxid: 10090)

>sp|Q8K424|TRPV3_MOUSE Transient receptor potential cation channel subfamily V member 3 OS=Mus musculus GN=Trpv3 PE=1 SV=2

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 52  TSLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAM 109
            S Y S+    + LF++T  LGD N  + S   YP +   +   +++L  +LLLNMLIA+
Sbjct: 619 CSSYGSFSDAVLELFKLTIGLGDLNIQQNS--TYPILFLFLLITYVILTFVLLLNMLIAL 676

Query: 110 MGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
           MG T  +V ++SE+ W  Q A+ ++  E+ + +
Sbjct: 677 MGETVENVSKESERIWRLQRARTILEFEKMLPE 709

Putative receptor-activated non-selective calcium permeant cation channel. It is activated by innocuous (warm) temperatures and shows an increased response at noxious temperatures greater than 39 degrees Celsius. Activation exhibits an outward rectification. May associate with TRPV1 and may modulate its activity.

Mus musculus (taxid: 10090)

>sp|Q8NET8|TRPV3_HUMAN Transient receptor potential cation channel subfamily V member 3 OS=Homo sapiens GN=TRPV3 PE=1 SV=2

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 4/93 (4%)

Query: 52  TSLYSSYLSTWMALFQIT--LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAM 109
            S Y S+    + LF++T  LGD N  + S   YP +   +   +++L  +LLLNMLIA+
Sbjct: 619 CSSYGSFSDAVLELFKLTIGLGDLNIQQNSK--YPILFLFLLITYVILTFVLLLNMLIAL 676

Query: 110 MGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
           MG T  +V ++SE+ W  Q A+ ++  E+ + +
Sbjct: 677 MGETVENVSKESERIWRLQRARTILEFEKMLPE 709

Putative receptor-activated non-selective calcium permeant cation channel. It is activated by innocuous (warm) temperatures and shows an increased response at noxious temperatures greater than 39 degrees Celsius. Activation exhibits an outward rectification. May associate with TRPV1 and may modulate its activity.

Homo sapiens (taxid: 9606)

>sp|Q9R186|TRPV6_RAT Transient receptor potential cation channel subfamily V member 6 OS=Rattus norvegicus GN=Trpv6 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 25/155 (16%)

Query: 13  FAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---FPGVKTSLYSSYLSTWMALFQIT 69
           FA+   W  +M+FA   ++ GPF  M    ++     F  +   +   + S +  +FQ  
Sbjct: 455 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 514

Query: 70  LGD-----YNYP-------ELSYTV----------YPTMSKIVFTVFMVLVPILLLNMLI 107
             D     Y+YP       EL  T+           P M  I +  F ++  +L+LN+LI
Sbjct: 515 DPDELGHFYDYPMALFSTFELFLTIIDGPANYDVDLPFMYSITYAAFAIIATLLMLNLLI 574

Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
           AMMG+T+  V  + ++ W  Q     V LER + +
Sbjct: 575 AMMGDTHWRVAHERDELWRAQVVATTVMLERKLPR 609

Calcium selective cation channel probably involved in Ca(2+) uptake in various tissues, including Ca(2+) reabsorption in intestine. The channel is activated by low internal calcium level, probably including intracellular calcium store depletion, and the current exhibits an inward rectification. Inactivation includes both, a rapid Ca(2+)-dependent and a slower Ca(2+)-calmodulin-dependent mechanism, the latter may be regulated by phosphorylation. In vitro, is slowly inhibited by Mg(2+) in a voltage-independent manner. Heteromeric assembly with TRPV5 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.

Rattus norvegicus (taxid: 10116)

>sp|Q9H1D0|TRPV6_HUMAN Transient receptor potential cation channel subfamily V member 6 OS=Homo sapiens GN=TRPV6 PE=1 SV=2

 Score = 54.3 bits (129), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 25/155 (16%)

Query: 13  FAVPGSWFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYKGF 47
           FA+   W  +M+FA   ++ GPF  M                         AFY +++  
Sbjct: 456 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 515

Query: 48  PGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLI 107
              +   +  Y     + F++ L   + P       P M  I +  F ++  +L+LN+LI
Sbjct: 516 DPEELGHFYDYPMALFSTFELFLTIIDGPANYNVDLPFMYSITYAAFAIIATLLMLNLLI 575

Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
           AMMG+T+  V  + ++ W  Q     V LER + +
Sbjct: 576 AMMGDTHWRVAHERDELWRAQIVATTVMLERKLPR 610

Calcium selective cation channel probably involved in Ca(2+) uptake in various tissues, including Ca(2+) reabsorption in intestine. The channel is activated by low internal calcium level, probably including intracellular calcium store depletion, and the current exhibits an inward rectification. Inactivation includes both, a rapid Ca(2+)-dependent and a slower Ca(2+)-calmodulin-dependent mechanism, the latter may be regulated by phosphorylation. In vitro, is slowly inhibited by Mg(2+) in a voltage-independent manner. Heteromeric assembly with TRPV5 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.

Homo sapiens (taxid: 9606)

>sp|Q9XSM3|TRPV5_RABIT Transient receptor potential cation channel subfamily V member 5 OS=Oryctolagus cuniculus GN=Trpv5 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 25/153 (16%)

Query: 11  LIFAVPGSWFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYK 45
           L FA+   W  +M+FA   ++ GPF  M                         AF+  ++
Sbjct: 454 LSFALVLGWCSVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFHITFQ 513

Query: 46  GFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
                    +S Y +   + F++ L   + P       P M  I +  F ++  +L+LN+
Sbjct: 514 TEDPNNLGEFSDYPTALFSTFELFLTIIDGPANYSVDLPFMYCITYAAFAIIATLLMLNL 573

Query: 106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALER 138
            IAMMG+T+  V ++ ++ W  Q     V LER
Sbjct: 574 FIAMMGDTHWRVAQERDELWRAQVVATTVMLER 606

Constitutively active calcium selective cation channel thought to be involved in Ca(2+) reabsorption in kidney and intestine. The channel is activated by low internal calcium level and the current exhibits an inward rectification. A Ca(2+)-dependent feedback regulation includes fast channel inactivation and slow current decay. Heteromeric assembly with TRPV6 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.

Oryctolagus cuniculus (taxid: 9986)

>sp|P69744|TRPV5_MOUSE Transient receptor potential cation channel subfamily V member 5 OS=Mus musculus GN=Trpv5 PE=1 SV=2

 Score = 53.9 bits (128), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)

Query: 19  WFLLMFFAGAIRLTGPFVTM-------------------------AFYFLYKGFPGVKTS 53
           W  +M+FA   ++ GPF  M                         AFY +++        
Sbjct: 455 WCSVMYFARGFQMLGPFTIMIQKMIFGDLLRFCWLMAMVILGFASAFYIIFQTEDPDNLG 514

Query: 54  LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNT 113
            +S Y +   + F++ L   + P       P M  + +  F ++  +L+LN+ IAMMG+T
Sbjct: 515 EFSDYPTAMFSTFELFLTIIDGPANYRVDLPFMYSVTYATFAIIATLLMLNLFIAMMGDT 574

Query: 114 YAHVIEQSEKEWMKQWAKIVVALER 138
           +  V ++ ++ W  Q     V LER
Sbjct: 575 HWRVAQERDELWRAQVVATTVMLER 599

Constitutively active calcium selective cation channel thought to be involved in Ca(2+) reabsorption in kidney and intestine. The channel is activated by low internal calcium level and the current exhibits an inward rectification. A Ca(2+)-dependent feedback regulation includes fast channel inactivation and slow current decay. Heteromeric assembly with TRPV6 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.

Mus musculus (taxid: 10090)

>sp|Q91WD2|TRPV6_MOUSE Transient receptor potential cation channel subfamily V member 6 OS=Mus musculus GN=Trpv6 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 25/155 (16%)

Query: 13  FAVPGSWFLLMFFAGAIRLTGPFVTMAFYFLYKG---FPGVKTSLYSSYLSTWMALFQIT 69
           FA+   W  +M+FA   ++ GPF  M    ++     F  +   +   + S +  +FQ  
Sbjct: 455 FALVLGWCNVMYFARGFQMLGPFTIMIQKMIFGDLMRFCWLMAVVILGFASAFYIIFQTE 514

Query: 70  LGD-----YNYP-------ELSYTV----------YPTMSKIVFTVFMVLVPILLLNMLI 107
             D     Y+YP       EL  T+           P M  + +  F ++  +L+LN+LI
Sbjct: 515 DPDELGHFYDYPMALFSTFELFLTIIDGPANYDVDLPFMYSVTYAAFAIIATLLMLNLLI 574

Query: 108 AMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQ 142
           AMMG+T+  V  + ++ W  Q     V LER + +
Sbjct: 575 AMMGDTHWRVAHERDELWRAQVVATTVMLERKLPR 609

Calcium selective cation channel probably involved in Ca(2+) uptake in various tissues, including Ca(2+) reabsorption in intestine. The channel is activated by low internal calcium level, probably including intracellular calcium store depletion, and the current exhibits an inward rectification. Inactivation includes both, a rapid Ca(2+)-dependent and a slower Ca(2+)-calmodulin-dependent mechanism, the latter may be regulated by phosphorylation. In vitro, is slowly inhibited by Mg(2+) in a voltage-independent manner. Heteromeric assembly with TRPV5 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
242023927	1055	conserved hypothetical protein [Pediculu	0.849	0.165	0.735	2e-80
383858353	1101	PREDICTED: uncharacterized protein LOC10	0.980	0.183	0.560	3e-80
350399983	1104	PREDICTED: hypothetical protein LOC10074	0.980	0.182	0.553	1e-79
350399986	1105	PREDICTED: hypothetical protein LOC10074	0.980	0.182	0.553	1e-79
110748981	1101	PREDICTED: hypothetical protein LOC72611	0.849	0.158	0.719	4e-79
380013353	1105	PREDICTED: uncharacterized protein LOC10	0.849	0.158	0.719	5e-79
345485102	1147	PREDICTED: hypothetical protein LOC10011	0.849	0.152	0.719	5e-79
307168692	1109	Transient receptor potential cation chan	0.980	0.182	0.557	1e-78
332020367	1109	Transient receptor potential cation chan	0.980	0.182	0.560	2e-78
340715377	1024	PREDICTED: transient receptor potential	0.849	0.170	0.714	5e-78

>gi|242023927|ref|XP_002432382.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212517805|gb|EEB19644.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/200 (73%), Positives = 162/200 (81%), Gaps = 25/200 (12%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           GD  TEEAIL+FAVP SWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 491 GDTDTEEAILVFAVPSSWFLLMFFAGAIRLTGPFVTMIYSMITGDMLTFGIIYSVFLFGF 550

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +F+FLYKG   V +SL++SY STWMALFQ+T+GDYNY +LS T YP +SK+VFT+FMV
Sbjct: 551 SQSFFFLYKGSKNVSSSLFTSYPSTWMALFQVTMGDYNYNDLSLTAYPAISKMVFTIFMV 610

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAV+QEDCHRYLQEYSIKL
Sbjct: 611 LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVNQEDCHRYLQEYSIKL 670

Query: 157 GPGDEPGTEQRGVLVIKSKT 176
           GPGD+P TEQRGVLVIKSK+
Sbjct: 671 GPGDDPSTEQRGVLVIKSKS 690

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858353|ref|XP_003704666.1| PREDICTED: uncharacterized protein LOC100877549 [Megachile rotundata]

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 162/289 (56%), Positives = 183/289 (63%), Gaps = 87/289 (30%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AIL+ AVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 493 GNRHAEDAILVVAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQ+TLGDYNY +LSYT YP +SK+VFT+FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQVTLGDYNYTDLSYTTYPNLSKMVFTIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAVSQ+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVSQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSKT------------------------------------- 176
           GPGD+P    +EQRGVLVIKSK+                                     
Sbjct: 673 GPGDDPNNPASEQRGVLVIKSKSKTKAKQRKGAVANWKRVGKVTINELRKRGMTGEELRR 732

Query: 177 --------------APEEPAPKFEAFS--------AALDVMAFTHDIDL 203
                         +P    P+  A +        AALDVMAF HD+DL
Sbjct: 733 IMWGRASFSTPVRVSPNVDEPQVSAVTAGFGDALTAALDVMAFAHDLDL 781

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399983|ref|XP_003485699.1| PREDICTED: hypothetical protein LOC100747394 isoform 1 [Bombus impatiens]

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/289 (55%), Positives = 182/289 (62%), Gaps = 87/289 (30%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AIL+ AVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 493 GNRHAEDAILVVAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQITLGDYNY +L YT YP +SK+VF +FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQITLGDYNYTDLGYTTYPNLSKMVFAIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAV+Q+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVAQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSK-------------------------------------- 175
           GPGD+P    +EQRGVL+IKSK                                      
Sbjct: 673 GPGDDPNNPASEQRGVLIIKSKSKTKAKQRKGAVANWKRVGKVTINELKKRGITGEALRR 732

Query: 176 -------------TAPEEPAPKF--------EAFSAALDVMAFTHDIDL 203
                        T+P    P+         +A +AALDVMAF HD+DL
Sbjct: 733 VMWGRASFSTPVRTSPNTAEPQVSAVTAGFGDALTAALDVMAFAHDLDL 781

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350399986|ref|XP_003485700.1| PREDICTED: hypothetical protein LOC100747394 isoform 2 [Bombus impatiens]

 Score =  301 bits (770), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/289 (55%), Positives = 182/289 (62%), Gaps = 87/289 (30%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AIL+ AVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 493 GNRHAEDAILVVAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQITLGDYNY +L YT YP +SK+VF +FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQITLGDYNYTDLGYTTYPNLSKMVFAIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAV+Q+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVAQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSK-------------------------------------- 175
           GPGD+P    +EQRGVL+IKSK                                      
Sbjct: 673 GPGDDPNNPASEQRGVLIIKSKSKTKAKQRKGAVANWKRVGKVTINELKKRGITGEALRR 732

Query: 176 -------------TAPEEPAPKF--------EAFSAALDVMAFTHDIDL 203
                        T+P    P+         +A +AALDVMAF HD+DL
Sbjct: 733 VMWGRASFSTPVRTSPNTAEPQVSAVTAGFGDALTAALDVMAFAHDLDL 781

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110748981|ref|XP_001121881.1| PREDICTED: hypothetical protein LOC726119 [Apis mellifera]

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 146/203 (71%), Positives = 162/203 (79%), Gaps = 28/203 (13%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AILI AVPGSWFLLMFFAGA+RLTGPFVTM                       
Sbjct: 493 GNRHAEDAILIVAVPGSWFLLMFFAGAVRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQITLGDYNY +LSYT YP +SK+VF +FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQITLGDYNYTDLSYTTYPNLSKMVFAIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAVSQ+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVSQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPGT---EQRGVLVIKSKT 176
           GPGD+P     EQRGVL+IKSK+
Sbjct: 673 GPGDDPNNPAAEQRGVLIIKSKS 695

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013353|ref|XP_003690727.1| PREDICTED: uncharacterized protein LOC100868270 [Apis florea]

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 146/203 (71%), Positives = 163/203 (80%), Gaps = 28/203 (13%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AILI AVPGSWFLLMFFAGA+RLTGPFVTM                       
Sbjct: 493 GNRHAEDAILIVAVPGSWFLLMFFAGAVRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQITLGDYNY +LSYT YP +SK+VF +FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQITLGDYNYTDLSYTTYPNLSKMVFAIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAVSQ+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVSQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSKT 176
           GPGD+P    +EQRGVL+IKSK+
Sbjct: 673 GPGDDPNNPASEQRGVLIIKSKS 695

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345485102|ref|XP_001602588.2| PREDICTED: hypothetical protein LOC100118680 [Nasonia vitripennis]

 Score =  299 bits (765), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 146/203 (71%), Positives = 163/203 (80%), Gaps = 28/203 (13%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           GD+ TE+AIL+ AVPGSWFLLMFFAGA+RLTGPFVTM                       
Sbjct: 493 GDRHTEDAILVVAVPGSWFLLMFFAGAVRLTGPFVTMVYSMILGDMRTFGIIYMIVICGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             AFYFLYKG+PGVKT+L+ SY STWMALFQITLGDY+Y +LS T YP +SK VFT+FMV
Sbjct: 553 TQAFYFLYKGYPGVKTTLFHSYPSTWMALFQITLGDYSYSDLSMTTYPNLSKAVFTIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVV+LERAVSQ+D H YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVSLERAVSQDDAHNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSKT 176
           GPGD+P    +EQRGV+VIKSK+
Sbjct: 673 GPGDDPNDPASEQRGVMVIKSKS 695

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307168692|gb|EFN61724.1| Transient receptor potential cation channel subfamily V member 6 [Camponotus floridanus]

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 161/289 (55%), Positives = 182/289 (62%), Gaps = 87/289 (30%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AIL+FAVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 494 GNRHAEDAILVFAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYTIMLFGF 553

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLY SY+STWMALFQITLGDYNY EL+ T+YP +SK VF +FMV
Sbjct: 554 SQSFYFLYKGFPGVKSSLYHSYVSTWMALFQITLGDYNYAELNNTIYPNLSKTVFAIFMV 613

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKE++KQWAKIVV+LERAVSQ+D H YLQEYSIKL
Sbjct: 614 LVPILLLNMLIAMMGNTYAHVIEQSEKEFVKQWAKIVVSLERAVSQKDAHNYLQEYSIKL 673

Query: 157 GPGDEPG---TEQRGVLVIKSKT------------------------------------- 176
           GPGD+P    +EQRGVLVIKSK+                                     
Sbjct: 674 GPGDDPNNPASEQRGVLVIKSKSKTKAKQRKGAVANWKRVGKVTINELRKRGMTGEELRH 733

Query: 177 --------------APEEPAPKFEA--------FSAALDVMAFTHDIDL 203
                         +P    P+  A         +AALDVMAF HD DL
Sbjct: 734 IMWGRESFSTPVRVSPNAGQPQVSAVTAGFGDALTAALDVMAFAHDFDL 782

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332020367|gb|EGI60788.1| Transient receptor potential cation channel subfamily V member 6 [Acromyrmex echinatior]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 162/289 (56%), Positives = 180/289 (62%), Gaps = 87/289 (30%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           GD+  E+AIL+FAVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 494 GDRHAEDAILMFAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYTVMLFGF 553

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLY SY STWMALFQITLGDYNY +LS T YP +SK VF +FMV
Sbjct: 554 SQSFYFLYKGFPGVKSSLYHSYPSTWMALFQITLGDYNYADLSNTTYPNLSKTVFAIFMV 613

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKE++KQWAKIVV+LERAVSQ+D H YLQEYSIKL
Sbjct: 614 LVPILLLNMLIAMMGNTYAHVIEQSEKEFVKQWAKIVVSLERAVSQKDAHNYLQEYSIKL 673

Query: 157 GPGDEPG---TEQRGVLVIKSKT------------------------------------- 176
           GPGD+P    +EQRGVLVIKSK+                                     
Sbjct: 674 GPGDDPNNPASEQRGVLVIKSKSKTRAKQRKGAVSNWKRVGKVTILELRKRGMTGEELRR 733

Query: 177 --------------APEEPAPKFEA--------FSAALDVMAFTHDIDL 203
                         +P    P+  A         +AALDVMAF HD DL
Sbjct: 734 IMWGRASFSTPVRVSPNAGQPQVSAVTAGFDDALTAALDVMAFAHDFDL 782

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340715377|ref|XP_003396191.1| PREDICTED: transient receptor potential cation channel subfamily V member 6-like [Bombus terrestris]

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/203 (71%), Positives = 162/203 (79%), Gaps = 28/203 (13%)

Query: 2   GDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM----------------------- 38
           G++  E+AIL+ AVPGSWFLLMFFAGAIRLTGPFVTM                       
Sbjct: 493 GNRHAEDAILVVAVPGSWFLLMFFAGAIRLTGPFVTMVYSMITGDMLTFGIIYMVVLFGF 552

Query: 39  --AFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             +FYFLYKGFPGVK+SLYSSY STWMALFQITLGDYNY +L YT YP +SK+VF +FMV
Sbjct: 553 CQSFYFLYKGFPGVKSSLYSSYHSTWMALFQITLGDYNYTDLGYTTYPNLSKMVFAIFMV 612

Query: 97  LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
           LVPILLLNMLIAMMGNTYAHVIEQSEKEW+KQWAKIVV+LERAV+Q+D   YLQEYSIKL
Sbjct: 613 LVPILLLNMLIAMMGNTYAHVIEQSEKEWVKQWAKIVVSLERAVAQKDAQNYLQEYSIKL 672

Query: 157 GPGDEPG---TEQRGVLVIKSKT 176
           GPGD+P    +EQRGVLVIKSK+
Sbjct: 673 GPGDDPNNPASEQRGVLVIKSKS 695

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
FB|FBgn0086693	1123	iav "inactive" [Drosophila mel	0.679	0.124	0.7	2.1e-49
WB|WBGene00003889	937	osm-9 [Caenorhabditis elegans	0.577	0.127	0.436	1.9e-22
FB|FBgn0036414	833	nan "nanchung" [Drosophila mel	0.461	0.114	0.428	1.7e-16
WB|WBGene00003841	756	ocr-4 [Caenorhabditis elegans	0.737	0.201	0.305	1.1e-14
UNIPROTKB|Q9HBA0	871	TRPV4 "Transient receptor pote	0.436	0.103	0.361	5.5e-14
UNIPROTKB|F1RIT1	871	LOC100623810 "Uncharacterized	0.436	0.103	0.361	5.5e-14
UNIPROTKB|I3LF17	877	I3LF17 "Uncharacterized protei	0.436	0.102	0.361	5.6e-14
UNIPROTKB|F6PLL5	918	TRPV4 "Uncharacterized protein	0.436	0.098	0.361	6.3e-14
MGI|MGI:1926945	871	Trpv4 "transient receptor pote	0.436	0.103	0.340	4.5e-12
RGD|69337	871	Trpv4 "transient receptor pote	0.436	0.103	0.340	4.5e-12

FB|FBgn0086693 iav "inactive" [Drosophila melanogaster (taxid:7227)]

 Score = 525 (189.9 bits), Expect = 2.1e-49, P = 2.1e-49
 Identities = 98/140 (70%), Positives = 115/140 (82%)

Query:    37 TMAFYFLYKGFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMV 96
             + AFYFLYKG P V+++++++Y STWMALFQ TLGDYNYP+L+ T YP +SK VF +FM+
Sbjct:   580 SQAFYFLYKGHPQVQSTMFNTYTSTWMALFQTTLGDYNYPDLNQTTYPNLSKTVFVIFMI 639

Query:    97 LVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKL 156
              VPILLLNMLIAMMGNTY  VIEQSEKEWMKQWAKIVV LERAV Q D   YL+ YSI L
Sbjct:   640 FVPILLLNMLIAMMGNTYVTVIEQSEKEWMKQWAKIVVTLERAVPQADAKGYLEAYSIPL 699

Query:   157 GPGDEPGTEQRGVLVIKSKT 176
             GP D+ G E RGV+VIKSK+
Sbjct:   700 GPSDDSGFEVRGVMVIKSKS 719

GO:0007629 "flight behavior" evidence=IMP

GO:0005262 "calcium channel activity" evidence=ISS

GO:0006816 "calcium ion transport" evidence=ISS

GO:0007608 "sensory perception of smell" evidence=ISS

GO:0009408 "response to heat" evidence=IMP

GO:0048148 "behavioral response to cocaine" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0048060 "negative gravitaxis" evidence=IMP

GO:0043052 "thermotaxis" evidence=IMP

GO:0040040 "thermosensory behavior" evidence=IMP

WB|WBGene00003889 osm-9 [Caenorhabditis elegans (taxid:6239)]

 Score = 272 (100.8 bits), Expect = 1.9e-22, P = 1.9e-22
 Identities = 52/119 (43%), Positives = 82/119 (68%)

Query:    55 YSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTY 114
             Y+++  T++ LF+ ++G Y+Y E S   Y  ++K +F ++M ++PI+++N+LIAMMGNTY
Sbjct:   586 YNTFPETFITLFRASMGGYDYEEFSCANYQALTKTLFVLYMFVMPIMMINILIAMMGNTY 645

Query:   115 AHVIEQSEKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIK 173
               VI Q+EK W +Q+A+IV+ LER+V +E       EYSI+L      G E RG++VIK
Sbjct:   646 TTVIAQAEKAWRQQYAQIVMVLERSVGKERLAASQLEYSIRLDQEGSSGMEVRGLMVIK 704

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0007608 "sensory perception of smell" evidence=IMP

GO:0042048 "olfactory behavior" evidence=IMP

GO:0009612 "response to mechanical stimulus" evidence=IMP

GO:0008355 "olfactory learning" evidence=IGI;IMP

GO:0006972 "hyperosmotic response" evidence=IGI;IMP

GO:0022401 "negative adaptation of signaling pathway" evidence=IGI;IMP

GO:0031513 "nonmotile primary cilium" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0005261 "cation channel activity" evidence=TAS

FB|FBgn0036414 nan "nanchung" [Drosophila melanogaster (taxid:7227)]

 Score = 191 (72.3 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
 Identities = 42/98 (42%), Positives = 61/98 (62%)

Query:    63 MALFQIT-LGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQS 121
             M L  +T  GDY Y  +  T +   +KI+F +FMV+V +LL+NMLIAMMGNTY  + E  
Sbjct:   671 MFLMSLTNFGDY-YGAMVSTQHEYEAKILFFLFMVIVSVLLVNMLIAMMGNTYQKIAE-I 728

Query:   122 EKEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPG 159
               EW +QWA+IV+ +ER+V   +  +   +YS  +  G
Sbjct:   729 RNEWQRQWARIVLVVERSVPPAERLKNFMQYSQSMSDG 766

GO:0006816 "calcium ion transport" evidence=ISS

GO:0005262 "calcium channel activity" evidence=ISS

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

GO:0009270 "response to humidity" evidence=IMP

GO:0050974 "detection of mechanical stimulus involved in sensory perception" evidence=IMP

GO:0048060 "negative gravitaxis" evidence=IMP

WB|WBGene00003841 ocr-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 51/167 (30%), Positives = 91/167 (54%)

Query:    21 LLMFFAGAIRLTGPFVTMAFYFLYKGFP-----GVKTSLYSSYLSTWMALFQITLGDYN- 74
             L+ FF   + +   F + AFY ++ G+        + S+ S+   +++ +F ++L ++  
Sbjct:   544 LMRFFLIYLVIVVGF-SQAFYVIFLGYKRSDSGNREPSIMSNVAESYVRMFIMSLTEFTV 602

Query:    75 -YPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIV 133
              + +L    +  + KI F V+M+LV +LL+NMLIAMM NTY  V   S  EW++QW+ I+
Sbjct:   603 FFEQLEECEHTVIGKITFVVYMLLVTLLLINMLIAMMTNTYTEVSGNS-LEWLRQWSAII 661

Query:   134 VALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEE 180
             + +E++       RY + Y I+   G++       VL++K K   EE
Sbjct:   662 LMMEQSFDPATRLRYQRRYGIRFDGGEKL------VLLLKDKMTEEE 702

GO:0005216 "ion channel activity" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9HBA0 TRPV4 "Transient receptor potential cation channel subfamily V member 4" [Homo sapiens (taxid:9606)]

 Score = 156 (60.0 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
 Identities = 34/94 (36%), Positives = 58/94 (61%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS T YP +  I+   +++L  +LLLNM
Sbjct:   657 YPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNM 713

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   714 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

GO:0005524 "ATP binding" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0005034 "osmosensor activity" evidence=IEA

GO:0005929 "cilium" evidence=IEA

GO:0030103 "vasopressin secretion" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=IEA

GO:0047484 "regulation of response to osmotic stress" evidence=IEA

GO:0006816 "calcium ion transport" evidence=IDA;NAS

GO:0016021 "integral to membrane" evidence=NAS

GO:0006874 "cellular calcium ion homeostasis" evidence=IDA

GO:0005261 "cation channel activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IMP

GO:0006884 "cell volume homeostasis" evidence=TAS

GO:0007231 "osmosensory signaling pathway" evidence=ISS;TAS

GO:0009612 "response to mechanical stimulus" evidence=TAS

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005262 "calcium channel activity" evidence=IDA

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IDA

GO:0005912 "adherens junction" evidence=ISS

GO:0007043 "cell-cell junction assembly" evidence=ISS

GO:0019901 "protein kinase binding" evidence=IPI

GO:0070509 "calcium ion import" evidence=ISS

GO:0071476 "cellular hypotonic response" evidence=ISS

GO:0042169 "SH2 domain binding" evidence=ISS

GO:0007015 "actin filament organization" evidence=ISS

GO:0010977 "negative regulation of neuron projection development" evidence=ISS

GO:0031117 "positive regulation of microtubule depolymerization" evidence=ISS

GO:0031532 "actin cytoskeleton reorganization" evidence=ISS

GO:0043622 "cortical microtubule organization" evidence=ISS

GO:0046785 "microtubule polymerization" evidence=ISS

GO:0003779 "actin binding" evidence=ISS

GO:0005080 "protein kinase C binding" evidence=ISS

GO:0008017 "microtubule binding" evidence=ISS

GO:0043014 "alpha-tubulin binding" evidence=ISS

GO:0048487 "beta-tubulin binding" evidence=ISS

GO:0051015 "actin filament binding" evidence=ISS

GO:0005881 "cytoplasmic microtubule" evidence=ISS

GO:0005925 "focal adhesion" evidence=ISS

GO:0030027 "lamellipodium" evidence=ISS

GO:0030175 "filopodium" evidence=ISS

GO:0030426 "growth cone" evidence=ISS

GO:0030864 "cortical actin cytoskeleton" evidence=ISS

GO:0032587 "ruffle membrane" evidence=ISS

UNIPROTKB|F1RIT1 LOC100623810 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 156 (60.0 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
 Identities = 34/94 (36%), Positives = 58/94 (61%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS T YP +  I+   +++L  +LLLNM
Sbjct:   657 YPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNM 713

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   714 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|I3LF17 I3LF17 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 156 (60.0 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
 Identities = 34/94 (36%), Positives = 58/94 (61%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS T YP +  I+   +++L  +LLLNM
Sbjct:   663 YPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNM 719

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   720 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 753

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

UNIPROTKB|F6PLL5 TRPV4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 156 (60.0 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
 Identities = 34/94 (36%), Positives = 58/94 (61%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS T YP +  I+   +++L  +LLLNM
Sbjct:   704 YPSCRDSETFSTFL---LDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNM 760

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   761 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 794

GO:0016021 "integral to membrane" evidence=IEA

GO:0005216 "ion channel activity" evidence=IEA

MGI|MGI:1926945 Trpv4 "transient receptor potential cation channel, subfamily V, member 4" [Mus musculus (taxid:10090)]

 Score = 149 (57.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
 Identities = 32/94 (34%), Positives = 57/94 (60%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS   YP +  ++   +++L  +LLLNM
Sbjct:   657 YPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYPVVFILLLVTYIILTFVLLLNM 713

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   714 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

GO:0003779 "actin binding" evidence=ISO

GO:0005034 "osmosensor activity" evidence=IMP;IDA

GO:0005080 "protein kinase C binding" evidence=ISO

GO:0005216 "ion channel activity" evidence=IEA

GO:0005261 "cation channel activity" evidence=ISO

GO:0005262 "calcium channel activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=ISO

GO:0005881 "cytoplasmic microtubule" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005912 "adherens junction" evidence=IDA

GO:0005925 "focal adhesion" evidence=ISO

GO:0005929 "cilium" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006816 "calcium ion transport" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0006970 "response to osmotic stress" evidence=IDA;IPI

GO:0006971 "hypotonic response" evidence=ISO

GO:0007015 "actin filament organization" evidence=ISO

GO:0007043 "cell-cell junction assembly" evidence=IMP

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=ISO

GO:0007231 "osmosensory signaling pathway" evidence=IMP;IDA

GO:0008017 "microtubule binding" evidence=ISO

GO:0010977 "negative regulation of neuron projection development" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO;IPI

GO:0030027 "lamellipodium" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030103 "vasopressin secretion" evidence=IMP

GO:0030175 "filopodium" evidence=ISO

GO:0030426 "growth cone" evidence=ISO

GO:0030864 "cortical actin cytoskeleton" evidence=ISO

GO:0031117 "positive regulation of microtubule depolymerization" evidence=ISO

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0032587 "ruffle membrane" evidence=ISO

GO:0042169 "SH2 domain binding" evidence=IPI

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0043014 "alpha-tubulin binding" evidence=ISO

GO:0043622 "cortical microtubule organization" evidence=ISO

GO:0046785 "microtubule polymerization" evidence=ISO

GO:0047484 "regulation of response to osmotic stress" evidence=IMP

GO:0048487 "beta-tubulin binding" evidence=ISO

GO:0051015 "actin filament binding" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

GO:0070509 "calcium ion import" evidence=ISO;IDA

GO:0070588 "calcium ion transmembrane transport" evidence=IEA

GO:0071476 "cellular hypotonic response" evidence=IDA

RGD|69337 Trpv4 "transient receptor potential cation channel, subfamily V, member 4" [Rattus norvegicus (taxid:10116)]

 Score = 149 (57.5 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
 Identities = 32/94 (34%), Positives = 57/94 (60%)

Query:    47 FPGVKTS-LYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNM 105
             +P  + S  +S++L   + LF++T+G  +   LS   YP +  ++   +++L  +LLLNM
Sbjct:   657 YPACRDSETFSAFL---LDLFKLTIGMGDLEMLSSAKYPVVFILLLVTYIILTFVLLLNM 713

Query:   106 LIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERA 139
             LIA+MG T   V ++S+  W  QWA  ++ +ER+
Sbjct:   714 LIALMGETVGQVSKESKHIWKLQWATTILDIERS 747

GO:0003779 "actin binding" evidence=IDA

GO:0005034 "osmosensor activity" evidence=IEA;ISO

GO:0005080 "protein kinase C binding" evidence=IDA

GO:0005261 "cation channel activity" evidence=ISO;ISS;IDA

GO:0005262 "calcium channel activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=ISO;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;ISS

GO:0005912 "adherens junction" evidence=ISO;ISS

GO:0005925 "focal adhesion" evidence=IDA

GO:0005929 "cilium" evidence=IEA;ISO

GO:0006816 "calcium ion transport" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO;ISS

GO:0006970 "response to osmotic stress" evidence=ISO

GO:0006971 "hypotonic response" evidence=IDA

GO:0007015 "actin filament organization" evidence=IDA

GO:0007043 "cell-cell junction assembly" evidence=ISO;ISS

GO:0007204 "elevation of cytosolic calcium ion concentration" evidence=IEA;ISO

GO:0007231 "osmosensory signaling pathway" evidence=IEA;ISO

GO:0008017 "microtubule binding" evidence=IDA

GO:0010977 "negative regulation of neuron projection development" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030027 "lamellipodium" evidence=IDA

GO:0030103 "vasopressin secretion" evidence=IEA;ISO

GO:0030175 "filopodium" evidence=IDA

GO:0030426 "growth cone" evidence=IDA

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0031117 "positive regulation of microtubule depolymerization" evidence=IDA

GO:0031532 "actin cytoskeleton reorganization" evidence=IDA

GO:0032587 "ruffle membrane" evidence=IDA

GO:0042169 "SH2 domain binding" evidence=IEA;ISO

GO:0042538 "hyperosmotic salinity response" evidence=IEA;ISO

GO:0043014 "alpha-tubulin binding" evidence=IDA

GO:0043622 "cortical microtubule organization" evidence=IDA

GO:0046785 "microtubule polymerization" evidence=IDA

GO:0047484 "regulation of response to osmotic stress" evidence=IEA;ISO

GO:0048487 "beta-tubulin binding" evidence=IDA

GO:0051015 "actin filament binding" evidence=IDA

GO:0070509 "calcium ion import" evidence=ISO;IDA

GO:0071476 "cellular hypotonic response" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	206
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	2e-24
pfam00520	194	pfam00520, Ion_trans, Ion transport protein	6e-06
pfam08016	423	pfam08016, PKD_channel, Polycystin cation channel	0.001

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 99.8 bits (249), Expect = 2e-24
 Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 47/207 (22%)

Query: 7   EEAILIFAVPGSWFLLMFFAGAIRLTGPFVTM-------------------------AFY 41
           EEA+  FA+  SW  L++     +  GP   M                            
Sbjct: 468 EEALFAFALVLSWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVVLFGFACGLN 527

Query: 42  FLYK---------------GFPGVKTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTM 86
            LY+                    + + YS+   T   LF   +G  +     +     +
Sbjct: 528 QLYQYYDELKLNECSNPHARSCEKQGNAYSTLFETSQELFWAIIGLGDLLANEHKFTEFV 587

Query: 87  SKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQEDCH 146
             ++F  + V++ ILLLNMLIAMMGNTY  + + +++EW  Q AK+ ++ ER        
Sbjct: 588 GLLLFGAYNVIMYILLLNMLIAMMGNTYQLIADDADEEWKFQRAKLWMSYEREGG----- 642

Query: 147 RYLQEYSIKLGPGDEPGTEQRGVLVIK 173
                ++I  GP  +        +   
Sbjct: 643 TCPPPFNIIPGP--KSFVGLFKRIEKH 667

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|215968 pfam00520, Ion_trans, Ion transport protein

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 19  WFLLMFFAGAIRLTGPFVTMAFYFLYKGFPGVKTSLYSSYLSTWMALFQI--TLGDYNYP 76
             L +F    ++L G  +            G   S + SY    + LF+   T G  +  
Sbjct: 103 LLLFIFAIIGVQLFGGELDKCCDKNENPING--NSNFDSYGEALLWLFRTLTTEGWGDVM 160

Query: 77  ELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMM 110
             +      + KI F +F++L  +LLLN+LI ++
Sbjct: 161 YDTLVPGTVLGKIFFVIFIILGGVLLLNLLIGVI 194

This family contains Sodium, Potassium, Calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not the Pfam family due to it lacking the first four helices. Length = 194

>gnl|CDD|219699 pfam08016, PKD_channel, Polycystin cation channel

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 31  LTGPFVTMAFYFLYKGFPGV-----KTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPT 85
           L G  V     FL     G      +   +S+++ + + LF+   GD+ Y E+       
Sbjct: 333 LLGFAVMFVILFLAYAQLGYLLFGSQVDNFSNFVKSILTLFRTLCGDFGYTEIFS-GNRV 391

Query: 86  MSKIVFTVFMVLVPILLLNMLIAMMGNTYAHV 117
           +  ++F  F+ LV  +LLN+ +A++ ++Y  V
Sbjct: 392 LGPLLFLTFVFLVIFILLNLFLAIINDSYVEV 423

This family contains the cation channel region of PKD1 and PKD2 proteins. Length = 423

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
KOG3676|consensus	782		100.0
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.95
KOG3609|consensus	822		99.85
KOG3614|consensus	1381		99.77
KOG0510|consensus	929		99.77
PLN03223	1634	Polycystin cation channel protein; Provisional	99.6
PF08016	425	PKD_channel: Polycystin cation channel; InterPro:	99.52
KOG3599|consensus	798		99.36
PF00520	200	Ion_trans: Ion transport protein calcium channel s	98.54
KOG2301|consensus	1592		97.46
KOG3733|consensus	566		96.33
KOG2302|consensus	1956		95.59
KOG2301|consensus	1592		95.55
KOG2302|consensus	1956		95.19

>KOG3676|consensus

Probab=100.00  E-value=1.9e-38  Score=298.80  Aligned_cols=180  Identities=38%  Similarity=0.626  Sum_probs=159.9

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh----------heee----eeecCCcc---------------
Q psy14478          1 MGDKKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA----------FYFL----YKGFPGVK---------------   51 (206)
Q Consensus         1 ~g~~~~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi----------F~~l----~~gf~~~~---------------   51 (206)
                      +|....+.+++++|.+++|..+|||+|++|.+|||++||          |.++    .+||++++               
T Consensus       497 i~~~~~~~~~lvfAl~lgW~~~Lyf~Rgfq~~Gpf~~MIykmI~~DL~RF~~IY~Vfl~GFsqAfy~if~~~~~~~~~~~  576 (782)
T KOG3676|consen  497 LGAIKWELALLVFALVLGWKNLLYFTRGFQLTGPFVIMIYKMIFGDLFRFLLIYLVFLVGFSQAFYSIFQTCDRDSSPND  576 (782)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc
Confidence            366788999999999999999999999999999999999          4433    36887543               


Q ss_pred             --------ccCCCcHHHHHHHHHHHHhcCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHH
Q psy14478         52 --------TSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEK  123 (206)
Q Consensus        52 --------~~~f~s~~~s~~~lf~~~lGe~~~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~  123 (206)
                              +..|.++...++++|..++|..|++..++..+|++++++|++|+++++|+|+|||||||++||++|.++++.
T Consensus       577 ~~~~~~~m~~~~ds~~~~~l~lf~ftig~~dl~~~~~~~~~~~~kilfv~y~ilv~ILllNMLIAMMg~Ty~~Va~~s~~  656 (782)
T KOG3676|consen  577 KNVESNPMCNPYDSFSTFLLTLFEFTIGMGDLEACENTDYPVLFKILFVAYMILVTILLLNMLIAMMGNTYETVAQESEK  656 (782)
T ss_pred             ccccccccCChhhHHHHHHHHHHHHhhhhhhhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhHHH
Confidence                    124556778889999999999999988888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccCCCCCCCcccccceeeeeccCCCCCCcc
Q psy14478        124 EWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLGPGDEPGTEQRGVLVIKSKTAPEEPAPK  184 (206)
Q Consensus       124 ew~~qrA~~il~~E~~lp~~~~~~~~~~y~~~~~~~~~~~~~~~~~~v~~~k~~~~~~~~~  184 (206)
                      ||++|||++|+++||++||+.|++|+..|++++++++|    .|..+++++.++++..|++
T Consensus       657 ~Wk~Q~A~~iL~lErs~p~~~r~~~~~~y~~~~g~~~d----~R~~~~v~~~~~~~~~~~~  713 (782)
T KOG3676|consen  657 EWKLQWAATILMLERSLPPALRKRFRLGYSRPVGTSGD----VRWLLRVEEVNWTEWNQNL  713 (782)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHhhccceecCCCCc----eeEEEEEcccchhhHHHHH
Confidence            99999999999999999999999999999999998854    6888888888887766543

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.95  E-value=1.1e-28  Score=237.87  Aligned_cols=139  Identities=32%  Similarity=0.492  Sum_probs=120.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh----------hee----eeeecCCcc------------------
Q psy14478          4 KKTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA----------FYF----LYKGFPGVK------------------   51 (206)
Q Consensus         4 ~~~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi----------F~~----l~~gf~~~~------------------   51 (206)
                      ...+++++|++++++|+|+++|+++++.+||+++|+          |++    +++||+.+.                  
T Consensus       465 ~~~~~~l~a~~~~l~~~rll~~~~~~~~lGp~~i~l~~mi~~dl~~F~~i~~v~l~aF~~~~~~l~~~~~~~~~~~~~~~  544 (743)
T TIGR00870       465 TLIEEALFAFALVLSWLNLLYIFRGNQHLGPLQIMIGRMILGDILRFLFIYAVVLFGFACGLNQLYQYYDELKLNECSNP  544 (743)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhchhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Confidence            346789999999999999999999999999999988          332    234554211                  


Q ss_pred             --------ccCCCcHHHHHHHHHHHHhcCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHH
Q psy14478         52 --------TSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEK  123 (206)
Q Consensus        52 --------~~~f~s~~~s~~~lf~~~lGe~~~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~  123 (206)
                              ...|+++..++.++|++++|+.|+....+..++++|+++|++|+++++|||+|||||||++||++|+++++.
T Consensus       545 ~~~~~~~~~~~f~~~~~s~~~lf~~~~G~~~~~~~~~~~~~~~~~il~~~y~~i~~ilLlNlLIAmm~~t~~~v~~~~~~  624 (743)
T TIGR00870       545 HARSCEKQGNAYSTLFETSQELFWAIIGLGDLLANEHKFTEFVGLLLFGAYNVIMYILLLNMLIAMMGNTYQLIADDADE  624 (743)
T ss_pred             cccccccccccccCHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH
Confidence                    156889999999999999999988665555678999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHh---CCH
Q psy14478        124 EWMKQWAKIVVALERA---VSQ  142 (206)
Q Consensus       124 ew~~qrA~~il~~E~~---lp~  142 (206)
                      ||++|||++++++|+.   +||
T Consensus       625 ~wk~~r~~~~~~y~~~~~~~p~  646 (743)
T TIGR00870       625 EWKFQRAKLWMSYEREGGTCPP  646 (743)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCC
Confidence            9999999999999985   555

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG3609|consensus

Probab=99.85  E-value=1.1e-21  Score=186.49  Aligned_cols=139  Identities=24%  Similarity=0.348  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh---------heeee----eecCC----------------------c
Q psy14478          6 TEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA---------FYFLY----KGFPG----------------------V   50 (206)
Q Consensus         6 ~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi---------F~~l~----~gf~~----------------------~   50 (206)
                      +.++++|+|.+++++|+++++..++.+||+++.+         |+++|    .+|+.                      .
T Consensus       464 l~E~lfAiA~V~S~lrl~~i~t~n~~lGPlqISlGrmv~Di~kF~~I~~lvl~aF~iGl~qLy~yy~~~~~~~~~~~~~~  543 (822)
T KOG3609|consen  464 LAEGLFAIANVLSFLKLFYIFTMNPSLGPLQISLGRMVGDIYKFLFIFVLVLVAFSIGLNQLYDYYLNRKTMKIDQDYTK  543 (822)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccchHhhhhcchhhccccccccc
Confidence            6899999999999999999999999999999854         44332    23321                      0


Q ss_pred             cccCCCcHHHHHHHHHHHHhcCCCCCCc----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHHHHH
Q psy14478         51 KTSLYSSYLSTWMALFQITLGDYNYPEL----SYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWM  126 (206)
Q Consensus        51 ~~~~f~s~~~s~~~lf~~~lGe~~~~~~----~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~ew~  126 (206)
                      .+..|+|...|..++||.++|-.+....    ......++|.++|++|.+++.|+|||||||||+++||.|.++||.|||
T Consensus       544 ~~~~fsti~eS~~tLFWsiFglv~~~~~~l~~~Hkf~e~ig~~lfG~Y~vi~vIVLLNmLIAMmnnSyQeIeD~ADvEWK  623 (822)
T KOG3609|consen  544 TTDSFSTIGESSKTLFWSIFGLVVLGSVVLPYKHKFTEFIGEVLFGVYNVILIIVLLNLLIAMMSNSYQEIEDDADVEWK  623 (822)
T ss_pred             cccccccHHHHHHHHHHHHHhcccccceecccchhHHHHHHHHHHHhhheeeHHHHHHHHHHHHHhHHHHHhhcchhHHH
Confidence            1226999999999999999987663322    123457999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH---HHHhCCHHH
Q psy14478        127 KQWAKIVVA---LERAVSQED  144 (206)
Q Consensus       127 ~qrA~~il~---~E~~lp~~~  144 (206)
                      +.||++.++   -++++||+.
T Consensus       624 FARAKLw~syF~eg~tLPpPF  644 (822)
T KOG3609|consen  624 FARAKLWMSYFDEGMALPPPF  644 (822)
T ss_pred             HHHHHHHHHHhcCCCCCCCCc
Confidence            999999776   345788774

>KOG3614|consensus

Probab=99.77  E-value=3.5e-19  Score=175.43  Aligned_cols=195  Identities=16%  Similarity=0.281  Sum_probs=144.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh-------heeee------eecCCccc--------cCCCcHHHHHH
Q psy14478          5 KTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA-------FYFLY------KGFPGVKT--------SLYSSYLSTWM   63 (206)
Q Consensus         5 ~~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi-------F~~l~------~gf~~~~~--------~~f~s~~~s~~   63 (206)
                      ...|+++++-.+++.+|++.|+..++.+||+++|+       |+++|      +.|+.+-+        ....-+.+.++
T Consensus       889 ~~GRvIl~~d~i~~t~rLl~~f~V~~~lGPyI~mv~kMm~dmf~flfllaV~LlsfGVarQaIl~P~e~~~w~l~R~i~y  968 (1381)
T KOG3614|consen  889 YSGRVILCFDFILFTLRLLHYFTVSKQLGPYIVMVKKMMKDMFFFLFLLAVVLLSFGVARQAILRPDEPRHWWLFRNIFY  968 (1381)
T ss_pred             ecceeeeeehHHHHHHHHhhheeeccccCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCchHHHHHHHHH
Confidence            35788999999999999999999999999999987       44332      34443221        12334567888


Q ss_pred             HHHHHHhcCCCCCCcc-----------------------ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhh
Q psy14478         64 ALFQITLGDYNYPELS-----------------------YTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQ  120 (206)
Q Consensus        64 ~lf~~~lGe~~~~~~~-----------------------~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~  120 (206)
                      ..|.|++|+.--++++                       +....|+.+++.++|+++.+|||+||||||.++||+.|+++
T Consensus       969 ~PYlmifGeV~a~eID~~~~e~~~~~~p~~~~~s~~~~~c~pg~wl~plLl~~yLLv~nILL~NLLIA~Fn~tf~~v~~~ 1048 (1381)
T KOG3614|consen  969 WPYLMLFGEVPADEIDTCTCEKSFCGEPLRYESSPGNPSCPPGSWLTPLLLVIYLLVTNILLVNLLIAMFSYTFGNVQEN 1048 (1381)
T ss_pred             HHHHHHhccccHhhhhhhcccccccCCCcccCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            8999999986422110                       11234899999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHh--CCHHHH-HHH----HHhcccccCCCCCC-----------------------Ccccccce
Q psy14478        121 SEKEWMKQWAKIVVALERA--VSQEDC-HRY----LQEYSIKLGPGDEP-----------------------GTEQRGVL  170 (206)
Q Consensus       121 a~~ew~~qrA~~il~~E~~--lp~~~~-~~~----~~~y~~~~~~~~~~-----------------------~~~~~~~~  170 (206)
                      +++.|++||.++|.|++..  +||+.- .-|    ++..+.++++.+++                       ..-.+.++
T Consensus      1049 sd~iWkFQRY~limeyh~rP~LPPPfiilsHi~l~~~r~~~~~~~~~~~~~~~~~~klfls~e~~~kl~~fEe~~vE~~~ 1128 (1381)
T KOG3614|consen 1049 SDQIWKFQRYSLIMEYHSRPALPPPFIILSHIYLLLKRLSNSFRGDKRARDKDESLKLFLSKEENKKLHTFEEVCVENFL 1128 (1381)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHcccCcccccchhhhhhHhhCCHHHHhhhhHHHHHHHHHHH
Confidence            9999999999999999984  777752 222    22222233322110                       12233556


Q ss_pred             eeeeccCCCCCCcchHHhhhhhhhhhhhh
Q psy14478        171 VIKSKTAPEEPAPKFEAFSAALDVMAFTH  199 (206)
Q Consensus       171 v~~~k~~~~~~~~~~~~~~~~~d~~~~~~  199 (206)
                      ..+.+.++...++|++.+++++|.|..++
T Consensus      1129 r~~~~~~~~s~~Erir~t~~rvd~~~~~l 1157 (1381)
T KOG3614|consen 1129 RKREMEQNSSTEERIRRTANRVDLILNRL 1157 (1381)
T ss_pred             HHHHHHhccCchhhHHHHHHHHHHHHHHH
Confidence            66666777778899999999999998765

>KOG0510|consensus

Probab=99.77  E-value=3.9e-18  Score=161.84  Aligned_cols=147  Identities=20%  Similarity=0.354  Sum_probs=127.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh-------------heeeeeecCCcc------ccCCCcHHHHHHHHH
Q psy14478          6 TEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA-------------FYFLYKGFPGVK------TSLYSSYLSTWMALF   66 (206)
Q Consensus         6 ~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi-------------F~~l~~gf~~~~------~~~f~s~~~s~~~lf   66 (206)
                      ....+.|+|++++|++++.+++.++.+|.||+|+             |.++.+||+.++      ++.|++.+.+...+|
T Consensus       622 ~Q~~laa~aV~l~W~nllLmi~~~p~~gIfvvM~~~I~ktflk~f~vfs~lliaF~lsFYVll~~~~eFs~p~ms~l~t~  701 (929)
T KOG0510|consen  622 LQWVLAAFAVLLGWMNLLLMIGRFPVFGIFVVMLEVILKTFLKSFMVFSILLIAFGLSFYVLLNKSSEFSNPFMSKLETF  701 (929)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCccceehHHHHHHHHHHHHHHHHHHHHHHHhhhhheeeecCCCCcCCCcchhhhhH
Confidence            4567899999999999999999999999999998             333446777554      457999999999999


Q ss_pred             HHHhcCCCCCC-c-------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy14478         67 QITLGDYNYPE-L-------SYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALER  138 (206)
Q Consensus        67 ~~~lGe~~~~~-~-------~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~ew~~qrA~~il~~E~  138 (206)
                      .|++||.||.. .       .+...|..+.+.|++|+++|+|||+||||++..++.+.|+++|+..-..-+..++.++|+
T Consensus       702 ~MMiGe~dft~~~~~~~~~~~~l~~~v~s~~~f~~F~IfmtIvLMNLLiGLAV~DIq~vqk~A~LkrlamQv~L~s~iE~  781 (929)
T KOG0510|consen  702 VMMIGENDFTKVMFTEEFKRNSLAHPVLSFAIFVLFTIFMTIVLMNLLIGLAVGDIQGVQKHAELKRLAMQVNLHSRIEQ  781 (929)
T ss_pred             HHhhcccccccccccchhhcCcccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999872 1       123568999999999999999999999999999999999999999888888889999999


Q ss_pred             hCCHHHHHHHHHhc
Q psy14478        139 AVSQEDCHRYLQEY  152 (206)
Q Consensus       139 ~lp~~~~~~~~~~y  152 (206)
                      .+|-..+.+..+.-
T Consensus       782 ~L~~~~l~~~~k~~  795 (929)
T KOG0510|consen  782 KLPHHFLQRVDKKS  795 (929)
T ss_pred             HccchhHhhhhhcc
Confidence            99999988876643

>PLN03223 Polycystin cation channel protein; Provisional

Probab=99.60  E-value=2.1e-15  Score=149.29  Aligned_cols=113  Identities=18%  Similarity=0.296  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh-------------heeeeeecC-------CccccCCCcHHHHHHHHHHH
Q psy14478          9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMA-------------FYFLYKGFP-------GVKTSLYSSYLSTWMALFQI   68 (206)
Q Consensus         9 ~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi-------------F~~l~~gf~-------~~~~~~f~s~~~s~~~lf~~   68 (206)
                      .+.++.+++.|+|+++++|.++.++.+...+             |+++|++|+       +.....|+++..|+.++|+|
T Consensus      1293 aL~GIlIFLsiLKfLRLLRFNPrL~vLt~TLrrAapDLa~F~IIF~IVF~AFAqLG~LLFGt~ve~FSTf~sSL~TLFqM 1372 (1634)
T PLN03223       1293 TLSGINIILLLGRILKLMDFQPRLGVITRTLWLAGADLMHFFVIFGMVFVGYAFIGHVIFGNASVHFSDMTDSINSLFEN 1372 (1634)
T ss_pred             HHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhcCHHHHHHHHHHH
Confidence            3667889999999999999999999887543             233333432       33456899999999999999


Q ss_pred             HhcCCCC--CCccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhh
Q psy14478         69 TLGDYNY--PELSY--TVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQS  121 (206)
Q Consensus        69 ~lGe~~~--~~~~~--~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a  121 (206)
                      ++|+++|  +++..  ...+++|+++|++|++++.++||||+|||+.++|++|+++.
T Consensus      1373 LLGDfdYF~eDLk~l~e~nrVLGPIYFfSFILLV~FILLNMFIAII~DSFsEVK~d~ 1429 (1634)
T PLN03223       1373 LLGDITYFNEDLKNLTGLQFVVGMIYFYSYNIFVFMILFNFLLAIICDAFGEVKANA 1429 (1634)
T ss_pred             HHcCchHHHHHHHhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999985  22221  24689999999999999999999999999999999998764

>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys

Probab=99.52  E-value=2.5e-14  Score=130.53  Aligned_cols=112  Identities=29%  Similarity=0.528  Sum_probs=97.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh---------h----eeeeeecC-------CccccCCCcHHHHHHH
Q psy14478          5 KTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA---------F----YFLYKGFP-------GVKTSLYSSYLSTWMA   64 (206)
Q Consensus         5 ~~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi---------F----~~l~~gf~-------~~~~~~f~s~~~s~~~   64 (206)
                      +..+.+.|+.+++.|+|+++++|.++.++.+..++         |    +++++||+       +.....|+|+..++.+
T Consensus       294 ~~~~~l~a~~vfl~~lrll~~l~f~~~~~~~~~tl~~a~~~l~~f~~~~~i~~~~fa~~g~l~fG~~~~~f~s~~~s~~t  373 (425)
T PF08016_consen  294 QLYRYLLAFLVFLLWLRLLKLLRFNRRLSLLSRTLRRAAKDLLGFFVIFLIIFLAFAQAGYLLFGSYSEDFSSFSSSLVT  373 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHhhheeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccCCHHHHHHH
Confidence            34678899999999999999999999999999876         2    23345554       3456789999999999


Q ss_pred             HHHHHhcCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy14478         65 LFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHV  117 (206)
Q Consensus        65 lf~~~lGe~~~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V  117 (206)
                      ++.+++|+++++++.+ .++++|++++.+|++++.++++|++|||+.++|++|
T Consensus       374 l~~~l~g~~~~~~~~~-~~~~lg~l~~~~~~~~~~~illNl~iaIi~~~y~~V  425 (425)
T PF08016_consen  374 LFRMLLGDFDYDELYQ-ANPVLGPLFFFSFMFLVFFILLNLFIAIINDSYEEV  425 (425)
T ss_pred             HHHHhcCCCchhhhhc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999999998764 679999999999999999999999999999999975

Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].

>KOG3599|consensus

Probab=99.36  E-value=4.2e-12  Score=123.48  Aligned_cols=127  Identities=20%  Similarity=0.371  Sum_probs=107.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh-------------heeeeeecC-------CccccCCCcHHHHHHH
Q psy14478          5 KTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMA-------------FYFLYKGFP-------GVKTSLYSSYLSTWMA   64 (206)
Q Consensus         5 ~~e~~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi-------------F~~l~~gf~-------~~~~~~f~s~~~s~~~   64 (206)
                      ..++.+.|+.+++.|+|+.+++|.++.++.+..++             |.+++++++       +.....|+++..++++
T Consensus       551 ~~~~~l~a~lvfl~tiK~~k~l~f~~t~~~~s~TL~ra~~~I~gf~l~~~I~~~aya~l~~llfG~~v~~f~~f~~s~~t  630 (798)
T KOG3599|consen  551 IAARNLLAFLVFLTTIKLWKVLRFNKTMSQFSSTLSRAWKEIVGFALMFLILFFAYAQLGYLLFGNQVSDFRTFVASIVT  630 (798)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCChHHHHHHHHH
Confidence            35788999999999999999999999999999877             333344443       3456789999999999


Q ss_pred             HHHHHhcCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHH
Q psy14478         65 LFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIV  133 (206)
Q Consensus        65 lf~~~lGe~~~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~ew~~qrA~~i  133 (206)
                      ++..++|++++.++.. .++++|+++|.+|++++..|++||+.|+++++|+++++..+++ ..+..+++
T Consensus       631 ~~~~~~G~~~~~~i~~-~~r~LG~~~~~~~v~~v~~illnmF~aiI~~~~~evk~~~~~~-~~~~~~l~  697 (798)
T KOG3599|consen  631 LLRYILGDFCPAEIFH-ANRILGPLLFLTYVFVVSFILLNLFVAIINDTYGEVKADLAKE-RSSEVELI  697 (798)
T ss_pred             HHHHHhccCCcccccc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHhhc-cccchhHH
Confidence            9999999998888764 7899999999999999999999999999999999999887775 44444443

>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins

Probab=98.54  E-value=2.6e-07  Score=73.42  Aligned_cols=102  Identities=23%  Similarity=0.267  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh---------h-----eee--e--e-----ecC--------------Ccc
Q psy14478          9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMA---------F-----YFL--Y--K-----GFP--------------GVK   51 (206)
Q Consensus         9 ~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi---------F-----~~l--~--~-----gf~--------------~~~   51 (206)
                      .+.++..++.|+|++++++.++.+|+++.++         +     +++  +  .     |-.              ...
T Consensus        60 ~~~~~~~~l~~~R~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~lf~~~~~~~~~~~~~~~~~~~~  139 (200)
T PF00520_consen   60 SLLRIFRLLRLLRLLRLLRRFRSLRRLLRALIRSFPDLFKFILLLFIVLLFFACIGYQLFGGSDNSCCDPTWDSENDIYG  139 (200)
T ss_dssp             HCHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTS-------SS----SST
T ss_pred             ceEEEEEeeccccccccccccccccccccccccccccccccccccccccccccchhheeccccccccccccccccccccc
Confidence            4678888999999999999999999997654         0     000  0  1     111              111


Q ss_pred             ccCCCcHHHHHHHHHHHHhcCCCCCCccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14478         52 TSLYSSYLSTWMALFQITLGDYNYPELSY--TVYPTMSKIVFTVFMVLVPILLLNMLIAMM  110 (206)
Q Consensus        52 ~~~f~s~~~s~~~lf~~~lGe~~~~~~~~--~~~~~~~~ilf~~f~il~~IlLLNLLIAmm  110 (206)
                      ...|++++.++.++++++.|+...+....  +..++.+.+++++|.++++++++|++||+|
T Consensus       140 ~~~f~~~~~s~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~nlliavi  200 (200)
T PF00520_consen  140 YENFDSFGESLYWLFQTMTGEGWGDVMPSCMSARSWLAVIFFISFIIIVSILLLNLLIAVI  200 (200)
T ss_dssp             HHHHSSHHHHHHHHHHHHTTTTCCCCHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccCCccccccccccccchhHhHHhhhhhhhHHHHHHHHHHhcC
Confidence            34678999999999999998876655443  245788999999999999999999999987

The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....

>KOG2301|consensus

Probab=97.46  E-value=0.00038  Score=72.68  Aligned_cols=110  Identities=15%  Similarity=0.321  Sum_probs=82.2

Q ss_pred             CCccccCCCcHHHHHHHHHHHHhcCC-C--------------CCCcc---ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy14478         48 PGVKTSLYSSYLSTWMALFQITLGDY-N--------------YPELS---YTVYPTMSKIVFTVFMVLVPILLLNMLIAM  109 (206)
Q Consensus        48 ~~~~~~~f~s~~~s~~~lf~~~lGe~-~--------------~~~~~---~~~~~~~~~ilf~~f~il~~IlLLNLLIAm  109 (206)
                      .......|.|++.++..+|++..||- +              .++..   ++.++..|+++|++|.++++.|.+||+||+
T Consensus      1316 ~i~~~~NF~tf~~a~i~LFr~~Tge~W~~im~~~l~s~p~Cdp~~~~~~~dCGn~~~Ai~YF~Sf~iIs~~IvvNLfVAV 1395 (1592)
T KOG2301|consen 1316 GINDHNNFRTFPNSMVVLFRCATGEGWNDIMDDCLNSKPFCDPDDGNNGTDCGNPTVAIIYFVSWILISSYIVVNLFVAV 1395 (1592)
T ss_pred             ccCCCcccccchhheeeeeehhhhhhHHHHHHHHhcCCCCCCCCCCCcccccCCCCcceehhhHHHHHHHHHHHHHHHHH
Confidence            33456789999999999999888753 1              11111   467799999999999999999999999999


Q ss_pred             HhhhHHHHhhhhH--------HHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccC
Q psy14478        110 MGNTYAHVIEQSE--------KEWMKQWAKIVVALERAVSQEDCHRYLQEYSIKLG  157 (206)
Q Consensus       110 m~~ty~~V~~~a~--------~ew~~qrA~~il~~E~~lp~~~~~~~~~~y~~~~~  157 (206)
                      +-+.|+-..++++        .+...-|++.==+-++.+|-.....+++.-+.|++
T Consensus      1396 ImeNFs~~t~~~s~~Ls~~d~~~F~~vW~~fDpeatg~I~~~~~~~~lr~L~ppL~ 1451 (1592)
T KOG2301|consen 1396 ILENFSYATEDSSEGLSEDDFEKFYEAWDEFDPEATQEIPYSDLSAFLRSLDPPLD 1451 (1592)
T ss_pred             HHhhhhhhcccccccCCcccHHHHHHHHHhcChhhheeeeHhhHHHHHHhcCCccc
Confidence            9999998887766        45666676665556666776666666665555443

>KOG3733|consensus

Probab=96.33  E-value=0.0057  Score=56.07  Aligned_cols=131  Identities=18%  Similarity=0.341  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhHhhh---------he----eeeeecC-------CccccCCCcHHHHHHHHHHH
Q psy14478          9 AILIFAVPGSWFLLMFFAGAIRLTGPFVTMA---------FY----FLYKGFP-------GVKTSLYSSYLSTWMALFQI   68 (206)
Q Consensus         9 ~l~a~a~~l~w~~ll~f~r~~~~~Gp~v~Mi---------F~----~l~~gf~-------~~~~~~f~s~~~s~~~lf~~   68 (206)
                      .++..+.++.|+.++.|++.|+.-..++..+         |.    ++|+|+-       +.....|.+....--++|..
T Consensus       377 I~LGtstLLVW~GVIRYLgfF~~YNvlIlTl~~alPkVlRFc~ca~mIYlGy~FCGWIVLGPYHdKFrsLntvsECLFSL  456 (566)
T KOG3733|consen  377 ILLGTSTLLVWFGVIRYLGFFKTYNVLILTLKKALPKVLRFCCCAAMIYLGYCFCGWIVLGPYHDKFRSLNTVSECLFSL  456 (566)
T ss_pred             HHhCcchhHHHHHHHHHHHHHHhhhHHHHHHHhhhHHHHHHHHHHHHHHHHHhheeeEEecchHHhhhhHHHHHHHHHHh
Confidence            4567788999999999999999877777654         32    2344432       34455677776666777766


Q ss_pred             HhcCCCCCC---cccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHHhCCHH
Q psy14478         69 TLGDYNYPE---LSYT--VYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEKEWMKQWAKIVVALERAVSQE  143 (206)
Q Consensus        69 ~lGe~~~~~---~~~~--~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~ew~~qrA~~il~~E~~lp~~  143 (206)
                      .-|+=-+..   +...  ---+++.++..+|.=+-.-+.|.++||+++|+|+++++       .|        ....|..
T Consensus       457 INGDDMFaTFA~mqqkS~lvWlFsqiYLYSFISLfIYmvLSLFIAlItdaYDTIK~-------~q--------q~GfpeT  521 (566)
T KOG3733|consen  457 INGDDMFATFATMQQKSTLVWLFSQIYLYSFISLFIYMVLSLFIALITDAYDTIKA-------YQ--------QDGFPET  521 (566)
T ss_pred             hCchhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-------hh--------hCCCChh
Confidence            666532221   1111  11245677777777777777899999999999999774       22        3467888


Q ss_pred             HHHHHHHhccc
Q psy14478        144 DCHRYLQEYSI  154 (206)
Q Consensus       144 ~~~~~~~~y~~  154 (206)
                      ..+.|..+.+-
T Consensus       522 dLqafi~ec~d  532 (566)
T KOG3733|consen  522 DLQAFITECAD  532 (566)
T ss_pred             HHHHHHHHhcc
Confidence            88888765443

>KOG2302|consensus

Probab=95.59  E-value=0.023  Score=57.09  Aligned_cols=70  Identities=17%  Similarity=0.390  Sum_probs=54.8

Q ss_pred             ccCCCcHHHHHHHHHHHHhcCC-C---CCCc------cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhh
Q psy14478         52 TSLYSSYLSTWMALFQITLGDY-N---YPEL------SYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQS  121 (206)
Q Consensus        52 ~~~f~s~~~s~~~lf~~~lGe~-~---~~~~------~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a  121 (206)
                      ...|++|+.+++++|+...|+- +   -+.+      +.+-.+++++++|+.|.+....+|+|..||++..--++-.+++
T Consensus      1612 hatf~nfgmafltlfrvstgdnwngimkdtlrdc~~e~~cls~~~sp~yfvsfvltaqfvlvnvvvavlmkhleesnkea 1691 (1956)
T KOG2302|consen 1612 HATFENFGMAFLTLFRVSTGDNWNGIMKDTLRDCTHEESCLSQFVSPLYFVSFVLTAQFVLVNVVVAVLMKHLEESNKEA 1691 (1956)
T ss_pred             ccchhhhchHhhhheeeccCCcccchhhhhHhhcccchhhhhhhccchhhhhhhhhhhhHHHHHHHHHHHHHHHhhchhh
Confidence            4579999999999999999873 2   1111      1245689999999999999999999999999887666544433

>KOG2301|consensus

Probab=95.55  E-value=0.029  Score=59.11  Aligned_cols=64  Identities=14%  Similarity=0.430  Sum_probs=50.5

Q ss_pred             CCCcHHHHHHHHHHHHhcCCC---CCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh
Q psy14478         54 LYSSYLSTWMALFQITLGDYN---YPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVI  118 (206)
Q Consensus        54 ~f~s~~~s~~~lf~~~lGe~~---~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~  118 (206)
                      .|.+|+.+++++|+.+-|++.   |+.... ...++..++|+.+.++.+.++||+++|+..++++.-.
T Consensus       600 ~~~~fp~sfl~vFqlt~e~W~evm~~~~~~-~~~~~~~i~Fi~~~l~gn~vvLnlFlAl~~~n~~~~e  666 (1592)
T KOG2301|consen  600 HFTDFPHSFLSVFQITCEEWTDVMWDCMEA-AGQPLCAIYFIAYFLFGNLVVLNLFLALILDNFESDE  666 (1592)
T ss_pred             chhhCHHHHHHHHHHcCCchHHHHHHHHHH-hccchhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhh
Confidence            577899999999995445543   333332 2568888999999999999999999999999988644

>KOG2302|consensus

Probab=95.19  E-value=0.1  Score=52.71  Aligned_cols=101  Identities=18%  Similarity=0.321  Sum_probs=67.5

Q ss_pred             CCCcHHHHHHHHHHHHh-cC---CCCCCccc--------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhh
Q psy14478         54 LYSSYLSTWMALFQITL-GD---YNYPELSY--------TVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQS  121 (206)
Q Consensus        54 ~f~s~~~s~~~lf~~~l-Ge---~~~~~~~~--------~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a  121 (206)
                      .|.+.+.+++++|...- .+   +-|+.++.        ..+.++-.++|++|.+++....+||++....+.+-+-.+++
T Consensus      1316 NfdnlgqalmSLFvLaSkDgWv~ImyDgldavavdqqPI~nhnpwmllYfIsfllIvsffVlnmfVgvvvenfhKcrqhq 1395 (1956)
T KOG2302|consen 1316 NFDNLGQALMSLFVLASKDGWVNIMYDGLDAVAVDQQPILNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ 1395 (1956)
T ss_pred             ccchHHHHHHHHHHHhcccchhhhhccchhhceeeeeccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677888999997653 11   12333211        12234457899999999999999999999999998877777


Q ss_pred             HHHHHHHHHH-HHHHHHHhCCHHHHHHHHHhccc
Q psy14478        122 EKEWMKQWAK-IVVALERAVSQEDCHRYLQEYSI  154 (206)
Q Consensus       122 ~~ew~~qrA~-~il~~E~~lp~~~~~~~~~~y~~  154 (206)
                      ++|=.+.|-+ .+-.+|+..-..+++.|-..|+.
T Consensus      1396 e~EeArRreEKrLrrlekkrR~Aq~kpyyseyt~ 1429 (1956)
T KOG2302|consen 1396 EAEEARRREEKRLRRLEKKRRAAQRKPYYSEYTM 1429 (1956)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCCcccccccH
Confidence            7654333333 44457776666666666555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
4f4l_A	112	ION transport protein; alpha helical membrane prot	98.43
4dxw_A	229	Navrh, ION transport protein; tetrameric, voltage-	98.36
3rvy_A	285	ION transport protein; tetrameric ION channel, vol	98.06
2r9r_B	514	Paddle chimera voltage gated potassium channel KV;	94.14

>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}

Probab=98.43  E-value=1.2e-07  Score=70.66  Aligned_cols=75  Identities=17%  Similarity=0.229  Sum_probs=47.4

Q ss_pred             CccccCCCcHHHHHHHHHHHHhcCCCCCCcc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHH
Q psy14478         49 GVKTSLYSSYLSTWMALFQITLGDYNYPELS--YTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEK  123 (206)
Q Consensus        49 ~~~~~~f~s~~~s~~~lf~~~lGe~~~~~~~--~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~  123 (206)
                      ......|++++.+++++|+.+.||-=.+.+.  .....+.+.++|++|.++.+.+++||+||++.++|++.+++.++
T Consensus        30 ~~~~~~F~~~~~s~ltLF~i~T~e~W~~~~~~~~~~~~~~a~iyFi~fi~i~~fi~lNLfiaVi~~~f~~~~~~~~~  106 (112)
T 4f4l_A           30 ATFPEWFGDLSKSLYTLFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTTFTVLNLFIGIIVDAMAITKEQEEE  106 (112)
T ss_dssp             TTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHTTTSTTTHHHHHHHHHHHHHHHHHHHTTTC-------------
T ss_pred             CCccccccCHHHHHHHHHHHHHccccHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444569999999999999998873111121  11234567899999999999999999999999999987766554

>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}

Probab=98.36  E-value=2.7e-07  Score=75.99  Aligned_cols=72  Identities=17%  Similarity=0.134  Sum_probs=55.1

Q ss_pred             CCccccCCCcHHHHHHHHHHHHhcCCCCCCccc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhh
Q psy14478         48 PGVKTSLYSSYLSTWMALFQITLGDYNYPELSY-TVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIE  119 (206)
Q Consensus        48 ~~~~~~~f~s~~~s~~~lf~~~lGe~~~~~~~~-~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~  119 (206)
                      .+.....|+|+++++.++|+.+.||-=.+.+.+ ....+.+.++|++|.++++.+++||+||++.|+|++.++
T Consensus       156 ~~~~~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~i~lNlfiavi~~~f~~~~~  228 (229)
T 4dxw_A          156 GNDDPSRWGDLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSITILNLVIAILVDVVIQKKL  228 (229)
T ss_dssp             TTTSCTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ccCCcccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            344556799999999999999998731111111 112346889999999999999999999999999997543

>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*

Probab=98.06  E-value=1.7e-06  Score=73.33  Aligned_cols=75  Identities=13%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             CccccCCCcHHHHHHHHHHHHhcCC-CCCCc-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhHH
Q psy14478         49 GVKTSLYSSYLSTWMALFQITLGDY-NYPEL-SYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQSEK  123 (206)
Q Consensus        49 ~~~~~~f~s~~~s~~~lf~~~lGe~-~~~~~-~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~a~~  123 (206)
                      +.....|+|+++++.++|+++.|+. .|+.. ......+.+.++|++|.+++.++++|+++|++.+.|++..++.+.
T Consensus       172 ~~~~~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~~~lnl~~aii~~~f~~~~~~~~~  248 (285)
T 3rvy_A          172 ERFPEWFGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTFVMINLVVAICVDAMAILNQKEEQ  248 (285)
T ss_dssp             TTCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred             cccccccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444569999999999999988763 32332 112334567899999999999999999999999999987665443

>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*

Probab=94.14  E-value=0.21  Score=45.78  Aligned_cols=66  Identities=8%  Similarity=0.137  Sum_probs=46.3

Q ss_pred             cccCCCcHHHHHHHHHHHHhcCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhh
Q psy14478         51 KTSLYSSYLSTWMALFQITLGDYNYPELSYTVYPTMSKIVFTVFMVLVPILLLNMLIAMMGNTYAHVIEQ  120 (206)
Q Consensus        51 ~~~~f~s~~~s~~~lf~~~lGe~~~~~~~~~~~~~~~~ilf~~f~il~~IlLLNLLIAmm~~ty~~V~~~  120 (206)
                      ....|.+++++++..+..+.+. .|.+..  +....++ +++++.+++.++++|++||++.+.|+...++
T Consensus       369 ~~~~F~s~~~a~y~~~vT~TTv-GYGDi~--P~t~~gr-~f~~~~~l~G~~~l~l~iavI~~~f~~~~~~  434 (514)
T 2r9r_B          369 RDSQFPSIPDAFWWAVVSMTTV-GYGDMV--PTTIGGK-IVGSLCAIAGVLTIALPVPVIVSNFNYFYHR  434 (514)
T ss_dssp             TTCSCSSHHHHHHHHHHHHTTC-CCSSSC--CCSHHHH-HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCccccchhhhhheeeeEEEec-ccCCCC--CCCcchH-hhehhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3567889999988877766432 233322  2234555 4667777888999999999999999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00