Psyllid ID: psy14643
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 801 | 2.2.26 [Sep-21-2011] | |||||||
| P18173 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.609 | 0.780 | 0.391 | 1e-96 | |
| P18172 | 625 | Glucose dehydrogenase [ac | no | N/A | 0.602 | 0.772 | 0.394 | 4e-96 | |
| P64264 | 528 | Uncharacterized GMC-type | yes | N/A | 0.549 | 0.833 | 0.338 | 6e-64 | |
| P64263 | 528 | Uncharacterized GMC-type | yes | N/A | 0.549 | 0.833 | 0.338 | 6e-64 | |
| Q9WWW2 | 552 | Alcohol dehydrogenase [ac | yes | N/A | 0.565 | 0.820 | 0.330 | 2e-58 | |
| Q8BJ64 | 596 | Choline dehydrogenase, mi | yes | N/A | 0.568 | 0.763 | 0.325 | 1e-57 | |
| Q6UPE0 | 599 | Choline dehydrogenase, mi | yes | N/A | 0.568 | 0.759 | 0.310 | 1e-57 | |
| Q8NE62 | 594 | Choline dehydrogenase, mi | yes | N/A | 0.553 | 0.745 | 0.331 | 3e-57 | |
| Q1QXE1 | 560 | Choline dehydrogenase OS= | yes | N/A | 0.559 | 0.8 | 0.324 | 1e-55 | |
| Q00593 | 558 | Alcohol dehydrogenase [ac | N/A | N/A | 0.540 | 0.775 | 0.321 | 3e-55 |
| >sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld PE=3 SV=3 | Back alignment and function desciption |
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Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/514 (39%), Positives = 294/514 (57%), Gaps = 26/514 (5%)
Query: 290 EKQPGQCQAMVKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYP 349
E +P C + ++QRC WPRGK +GG+SVLN M+Y RG DYD WAA GNPGW+Y++V P
Sbjct: 125 EPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVLP 184
Query: 350 YFLKIE-NMTIPELRNSPHHSTTGYVPVGYNPYKSQVVDAFLESSKYVNQSTIDYNQPEN 408
+F K E N+ + E+ + +H+ G +PVG PY + A L++ + + S D N +N
Sbjct: 185 FFKKSEDNLDLDEV-GTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNG-QN 242
Query: 409 YLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK 468
GF Q T RNG R SS A++ P R R NLHI LN+ T++LI +K GVE
Sbjct: 243 STGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVSD 302
Query: 469 N-GKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHI 526
G R + +KE++LSAGA+N+PHIL+ SGVGP++ L+ + ++ +LP VG+NL +H+
Sbjct: 303 QFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHV 362
Query: 527 TMAGLAFTHNT-TELFNYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPS 585
T F + T N+ T M Y + + G M S G + + T+Y P
Sbjct: 363 TYFTNFFIDDADTAPLNWAT------AMEYLLFRDGLM-SGTGISDVTAKLATRYADSPE 415
Query: 586 YPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRI 645
PD++ F G A T + G +++ + I+P +L P+SRG I
Sbjct: 416 RPDLQLYF--GGYLASCARTGQVGELLSN-----------NSRSIQIFPAVLNPRSRGFI 462
Query: 646 LLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQ 705
L S +PL+ P + NY E D+ TLVEGIK + LS+T P ++ G +L+ + GC+
Sbjct: 463 GLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEA 522
Query: 706 YEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMP 765
+ F SD YW C RQ T +H +G+C+MG + D VV++ELRVHGI+ LRV D S+MP
Sbjct: 523 HAFGSDAYWECAVRQNTGPENHQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTSIMP 582
Query: 766 ILIAAHPMAPIYMIGEKCADMIKDTWSQGENKVE 799
+ + + AP MI EK A ++K W +V+
Sbjct: 583 KVSSGNTHAPAVMIAEKGAYLLKRAWGAKVURVD 616
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Essential for cuticular modification during development. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 1EC: .EC: 9EC: 9EC: .EC: 1EC: 0 |
| >sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura pseudoobscura GN=Gld PE=3 SV=4 | Back alignment and function description |
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| >sp|P64264|Y1310_MYCBO Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1310 PE=3 SV=1 | Back alignment and function description |
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| >sp|P64263|Y1279_MYCTU Uncharacterized GMC-type oxidoreductase Rv1279/MT1316 OS=Mycobacterium tuberculosis GN=Rv1279 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2 SV=2 | Back alignment and function description |
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| >sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1 | Back alignment and function description |
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| >sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 801 | ||||||
| 194767906 | 1197 | GF19436 [Drosophila ananassae] gi|190622 | 0.946 | 0.633 | 0.405 | 1e-173 | |
| 242018470 | 624 | glucose dehydrogenase precursor, putativ | 0.630 | 0.809 | 0.497 | 1e-148 | |
| 193620141 | 623 | PREDICTED: glucose dehydrogenase [accept | 0.627 | 0.807 | 0.476 | 1e-137 | |
| 328705618 | 623 | PREDICTED: glucose dehydrogenase [accept | 0.620 | 0.797 | 0.474 | 1e-136 | |
| 193636655 | 620 | PREDICTED: glucose dehydrogenase [accept | 0.626 | 0.809 | 0.464 | 1e-135 | |
| 194743802 | 616 | GF16762 [Drosophila ananassae] gi|190627 | 0.625 | 0.813 | 0.479 | 1e-134 | |
| 195432697 | 885 | GK19743 [Drosophila willistoni] gi|19416 | 0.614 | 0.555 | 0.469 | 1e-134 | |
| 332023084 | 634 | Glucose dehydrogenase [Acromyrmex echina | 0.626 | 0.791 | 0.479 | 1e-134 | |
| 383860468 | 621 | PREDICTED: glucose dehydrogenase [accept | 0.614 | 0.792 | 0.474 | 1e-133 | |
| 345482592 | 609 | PREDICTED: glucose dehydrogenase [accept | 0.616 | 0.811 | 0.456 | 1e-133 |
| >gi|194767906|ref|XP_001966055.1| GF19436 [Drosophila ananassae] gi|190622940|gb|EDV38464.1| GF19436 [Drosophila ananassae] | Back alignment and taxonomy information |
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Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 327/807 (40%), Positives = 474/807 (58%), Gaps = 49/807 (6%)
Query: 36 MGSIPGGVEGIGFVQTKYNTDP-SYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAY 94
M SI GGVE + F+ + + P +PD+E I GSLA+D G ++ G DE Y++ Y
Sbjct: 393 MSSI-GGVEALAFLNLERSKLPKDWPDVELIMVSGSLASDEGTGLKLGANFKDEVYDKVY 451
Query: 95 KHL--EQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMA 152
+ L +Q++ +T+ M PKS GR+ L RNPL+ P++ YF+DE D+ L++GIK +
Sbjct: 452 RPLAQQQQDHFTLLVMQFHPKSVGRLWLRDRNPLRWPVIDPKYFKDEEDVEFLLDGIKAS 511
Query: 153 VNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINED 212
+ + +RIG++L P+PGC+++EF SDDYW C+ R ++ T+HH TCRMG D
Sbjct: 512 LRILEMPAMRRIGARLLRSPVPGCEKFEFGSDDYWRCSIRTLSYTLHHQVATCRMGPASD 571
Query: 213 GTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKD---------- 262
TTVVD EL+VHG++ LRV D S++P AH A +MIGEK ADMI++
Sbjct: 572 PTTVVDPELKVHGMRRLRVVDTSIIPEPPTAHTNAAAFMIGEKAADMIRNPRNLSSYDFI 631
Query: 263 -------------TWSQGENKLYANVTPDGIRRRAD----------------SIQAEKQP 293
S+ + A + G+ ++ Q
Sbjct: 632 VVGGGTSGCTLASRLSEDPRRSVALIEAGGVENLGHLTPLLSSYTQLTASNWGFKSVPQN 691
Query: 294 GQCQAMVKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYPYFLK 353
C M ++C PRGK +GGSS +N MIY RG RDYD WAA GNPGWSY EV PYFL+
Sbjct: 692 ASCLGMNHRQCALPRGKVLGGSSSINTMIYNRGNRRDYDGWAAAGNPGWSYQEVLPYFLR 751
Query: 354 IENMTIPELRNSPHHSTTGYVPVGYNPYKSQVVDAFLESSKYVNQSTIDYNQPENYLGFS 413
E + L SP+H+ +G + V + Y++++ +AF+E++ DYN E+ G S
Sbjct: 752 SERAHLEGLEQSPYHNHSGPLSVEFVRYRTKLAEAFVEAAVEAGLPLTDYNG-ESQNGVS 810
Query: 414 RIQATTRNGKRVSSYHAYIEPVRN-RPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKK 472
+QATT NG+R S+Y AYI+PVR+ RPNLHI ++VTR+L+D SK AYGVEF+ +
Sbjct: 811 YVQATTLNGRRHSAYSAYIQPVRDLRPNLHIFTFARVTRLLVDEASKTAYGVEFLHKNQS 870
Query: 473 RIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLPVGENLQDHITMAGLA 532
+ A KE+ILSAG +P ILM SG+GP + L +L I + + LPVG + DHI+ G
Sbjct: 871 YVFRALKEVILSAGVFGSPQILMLSGIGPEKDLRALGIPLVQALPVGRRMYDHISHFGPT 930
Query: 533 FTHNTTELFNYNTMLAQAFTM-MYNISKGGGMGSIPGGVEGIGFVQT-KYNTDPSYPDIE 590
F NT+ NY + + + Y SK S GGVE + F+++ + P +PDIE
Sbjct: 931 FVTNTSRQTNYFSRVTTTDVLSFYTDSKADTRMSSIGGVEALAFLKSNRSELPPDWPDIE 990
Query: 591 FIFAIGSLAADSGHTVRRGMGITDECYNQAYKHL--EQKNTWTIWPMLLLPKSRGRILLG 648
F+ GSLA+D G V+ G DE Y + YK L +++ +T+ ML P+S GR+ L
Sbjct: 991 FMMTAGSLASDEGTGVKMGANFKDEVYEKLYKELAKSEQDHFTLLVMLFHPRSVGRLWLK 1050
Query: 649 SRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEF 708
RNP P L +Y+ ++ D+ +++GIK A+ +S QRIG++L +PGC+ ++F
Sbjct: 1051 DRNPFSPPQLDPHYYTEDRDVEVVLDGIKAALRISEMPALQRIGARLLNRIVPGCEDFQF 1110
Query: 709 ESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILI 768
SDDYW C+ R ++ T++H TCRMG D VVD+ L+VHG++ LRV DAS++P++
Sbjct: 1111 ASDDYWRCSIRTLSFTIYHQVSTCRMGPRIDPHAVVDHRLKVHGMRRLRVVDASIVPVIP 1170
Query: 769 AAHPMAPIYMIGEKCADMIKDTWSQGE 795
AAH A +MI EK ADMI+D W +
Sbjct: 1171 AAHTNAVAFMIAEKAADMIRDEWGSSD 1197
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Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242018470|ref|XP_002429698.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] gi|212514701|gb|EEB16960.1| glucose dehydrogenase precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|193620141|ref|XP_001952665.1| PREDICTED: glucose dehydrogenase [acceptor]-like isoform 1 [Acyrthosiphon pisum] gi|328705616|ref|XP_003242858.1| PREDICTED: glucose dehydrogenase [acceptor]-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|328705618|ref|XP_003242859.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|193636655|ref|XP_001942555.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
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| >gi|194743802|ref|XP_001954389.1| GF16762 [Drosophila ananassae] gi|190627426|gb|EDV42950.1| GF16762 [Drosophila ananassae] | Back alignment and taxonomy information |
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| >gi|195432697|ref|XP_002064353.1| GK19743 [Drosophila willistoni] gi|194160438|gb|EDW75339.1| GK19743 [Drosophila willistoni] | Back alignment and taxonomy information |
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| >gi|332023084|gb|EGI63349.1| Glucose dehydrogenase [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|383860468|ref|XP_003705711.1| PREDICTED: glucose dehydrogenase [acceptor]-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|345482592|ref|XP_001607779.2| PREDICTED: glucose dehydrogenase [acceptor]-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 801 | ||||||
| FB|FBgn0030591 | 865 | CG9517 [Drosophila melanogaste | 0.612 | 0.567 | 0.445 | 1.4e-120 | |
| FB|FBgn0039415 | 616 | CG6142 [Drosophila melanogaste | 0.622 | 0.810 | 0.463 | 2e-118 | |
| FB|FBgn0030598 | 626 | CG9503 [Drosophila melanogaste | 0.626 | 0.801 | 0.445 | 6e-116 | |
| FB|FBgn0030590 | 703 | CG9518 [Drosophila melanogaste | 0.636 | 0.725 | 0.429 | 3.3e-111 | |
| FB|FBgn0030587 | 616 | CG9522 [Drosophila melanogaste | 0.619 | 0.805 | 0.427 | 4.9e-108 | |
| FB|FBgn0030592 | 726 | CG9514 [Drosophila melanogaste | 0.626 | 0.691 | 0.424 | 8.1e-108 | |
| FB|FBgn0030586 | 626 | CG12539 [Drosophila melanogast | 0.617 | 0.790 | 0.437 | 1e-107 | |
| FB|FBgn0030588 | 621 | CG9521 [Drosophila melanogaste | 0.609 | 0.785 | 0.430 | 4.1e-104 | |
| FB|FBgn0030589 | 622 | CG9519 [Drosophila melanogaste | 0.616 | 0.794 | 0.430 | 5.4e-102 | |
| FB|FBgn0001112 | 625 | Gld "Glucose dehydrogenase" [D | 0.375 | 0.481 | 0.390 | 3.4e-92 |
| FB|FBgn0030591 CG9517 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1165 (415.2 bits), Expect = 1.4e-120, Sum P(2) = 1.4e-120
Identities = 222/498 (44%), Positives = 314/498 (63%)
Query: 296 CQAMVKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYPYFLKIE 355
CQAM RC WPRGK +GGSSVLN M+Y RG+ DY+ WA++GNPGW YD + YFLK E
Sbjct: 364 CQAMKGDRCFWPRGKVLGGSSVLNAMVYVRGSKNDYNHWASLGNPGWDYDSMLKYFLKSE 423
Query: 356 NMTIPELRNSPHHSTTGYVPVGYNPYKSQVVDAFLESSKYVNQSTIDYNQPENYLGFSRI 415
++ P L +P+H T GY+ V P+++ + AFL++ + D N + GF
Sbjct: 424 DVRNPYLAKTPYHETGGYLTVQEAPWRTPLSIAFLQAGIEMGYENRDINGAQQ-TGFMLT 482
Query: 416 QATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIV 475
Q+T R G R S+ A+I PVR R N + L+++ TR+L D + K+A GVE+++ G+K +V
Sbjct: 483 QSTIRRGARCSTGKAFIRPVRQRKNFDVLLHAEATRILFDKQ-KRAIGVEYMRGGRKNVV 541
Query: 476 FARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLPVGENLQDHITMAGLAFTH 535
F R+E+I SAGA+NTP +LM SGVGP EHL+ I V DLPVG N+QDH+ + GL F
Sbjct: 542 FVRREVIASAGALNTPKLLMLSGVGPAEHLQEHNIPVISDLPVGNNMQDHVGLGGLTFVV 601
Query: 536 NTTELFNYNTMLAQAFTMMYNISKXXXXXXXXXXXXXXXFVQTKYNTDPS--YPDIEFIF 593
+ N +M Y + + F+ TKY DPS +PD++F F
Sbjct: 602 DAPLTVTRNRFQTIPVSMEYILRERGPMTFSGVEGVA--FLNTKYQ-DPSVDWPDVQFHF 658
Query: 594 AIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPL 653
S+ +D G +R+ + + D YN YK L+ TW+I P+LL PKS G + L SRNP
Sbjct: 659 CPSSINSDGGEQIRKILNLRDGFYNTVYKPLQHSETWSILPLLLRPKSTGWVRLNSRNPQ 718
Query: 654 KAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDY 713
P + NYF + D+ LVEGIK+A+N+S T+ FQR GS+L+ +PLPGC+ F+S++Y
Sbjct: 719 HQPKIIPNYFAHQEDIDVLVEGIKLAINVSNTQAFQRFGSRLHNIPLPGCRHLPFQSNEY 778
Query: 714 WACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPM 773
WAC ++ T T++H +GTCRMG + D T VVD LRV+G+ +RV DAS+MP ++ +P
Sbjct: 779 WACCIKEFTFTIYHPAGTCRMGPSWDVTAVVDPRLRVYGVSGVRVVDASIMPTIVNGNPN 838
Query: 774 APIYMIGEKCADMIKDTW 791
AP+ IGEK +D+IK+ W
Sbjct: 839 APVIAIGEKASDLIKEDW 856
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| FB|FBgn0039415 CG6142 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030598 CG9503 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030590 CG9518 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030587 CG9522 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030592 CG9514 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030586 CG12539 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030588 CG9521 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0030589 CG9519 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| FB|FBgn0001112 Gld "Glucose dehydrogenase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 801 | |||
| PRK02106 | 560 | PRK02106, PRK02106, choline dehydrogenase; Validat | 1e-106 | |
| COG2303 | 542 | COG2303, BetA, Choline dehydrogenase and related f | 1e-91 | |
| TIGR01810 | 532 | TIGR01810, betA, choline dehydrogenase | 6e-82 | |
| pfam05199 | 139 | pfam05199, GMC_oxred_C, GMC oxidoreductase | 1e-46 | |
| pfam05199 | 139 | pfam05199, GMC_oxred_C, GMC oxidoreductase | 1e-46 | |
| pfam00732 | 218 | pfam00732, GMC_oxred_N, GMC oxidoreductase | 1e-43 | |
| TIGR03970 | 487 | TIGR03970, Rv0697, dehydrogenase, Rv0697 family | 6e-39 | |
| PRK02106 | 560 | PRK02106, PRK02106, choline dehydrogenase; Validat | 3e-29 | |
| COG2303 | 542 | COG2303, BetA, Choline dehydrogenase and related f | 2e-28 | |
| TIGR01810 | 532 | TIGR01810, betA, choline dehydrogenase | 2e-22 | |
| TIGR03970 | 487 | TIGR03970, Rv0697, dehydrogenase, Rv0697 family | 4e-22 | |
| TIGR03970 | 487 | TIGR03970, Rv0697, dehydrogenase, Rv0697 family | 4e-22 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 6e-11 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 6e-06 | |
| PLN02785 | 587 | PLN02785, PLN02785, Protein HOTHEAD | 6e-06 | |
| TIGR02462 | 544 | TIGR02462, pyranose_ox, pyranose oxidase | 9e-04 | |
| TIGR02462 | 544 | TIGR02462, pyranose_ox, pyranose oxidase | 9e-04 |
| >gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 336 bits (865), Expect = e-106
Identities = 169/506 (33%), Positives = 238/506 (47%), Gaps = 78/506 (15%)
Query: 306 WPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPELRN 364
PRGK +GGSS +N M+Y RG DYD WA + G GWSY + PYF K E E
Sbjct: 82 CPRGKVLGGSSSINGMVYIRGNAMDYDNWAELPGLEGWSYADCLPYFKKAETRDGGE--- 138
Query: 365 SPHHSTTGYVPV--GYNPYKSQVVDAFLESSK---YVNQSTIDYN--QPENYLGFSRIQA 417
+ G + V G P + + AF+E+ Y T D N Q E GF +
Sbjct: 139 DDYRGGDGPLSVTRG-KPGTNPLFQAFVEAGVQAGY--PRTDDLNGYQQE---GFGPMDR 192
Query: 418 TTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFA 477
T NG+R S+ AY++P RPNL I ++ R+L E K+A GVE+ + G + A
Sbjct: 193 TVTNGRRWSAARAYLDPALKRPNLTIVTHALTDRILF--EGKRAVGVEYERGGGRETARA 250
Query: 478 RKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFTHN 536
R+E+ILSAGAIN+P +L SG+GP EHL+ L I V DLP VGENLQDH+ + +
Sbjct: 251 RREVILSAGAINSPQLLQLSGIGPAEHLKELGIPVVHDLPGVGENLQDHLEV---YIQYE 307
Query: 537 TTE---LFNYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIF 593
+ L+ + + G G+G+ E GF+++ +P+I++ F
Sbjct: 308 CKQPVSLYPALKWWNKPKIGAEWLFTGTGLGA-SNHFEAGGFIRS--RAGVDWPNIQYHF 364
Query: 594 ---AI---GSLAADS-GHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRIL 646
AI GS A G G PM SRG +
Sbjct: 365 LPVAIRYDGSNAVKGHGFQAHVG------------------------PM--RSPSRGSVK 398
Query: 647 LGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRI-GSKLNPVPLPGCKQ 705
L S +P P + NY E D + I++ + G +++P
Sbjct: 399 LKSADPRAHPSILFNYMSTEQDWREFRDAIRLTREIMAQPALDPYRGREISPGA------ 452
Query: 706 YEFESD---DYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADAS 762
+ ++D D + R+ T +H S TC+MG D VVD E RVHG++ LRV DAS
Sbjct: 453 -DVQTDEEIDAF---VREHAETAYHPSCTCKMG--TDPMAVVDPEGRVHGVEGLRVVDAS 506
Query: 763 VMPILIAAHPMAPIYMIGEKCADMIK 788
+MP + + AP MI EK AD+I+
Sbjct: 507 IMPTITNGNLNAPTIMIAEKAADLIR 532
|
Length = 560 |
| >gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|218493 pfam05199, GMC_oxred_C, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|216089 pfam00732, GMC_oxred_N, GMC oxidoreductase | Back alignment and domain information |
|---|
| >gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family | Back alignment and domain information |
|---|
| >gnl|CDD|235000 PRK02106, PRK02106, choline dehydrogenase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|225186 COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233581 TIGR01810, betA, choline dehydrogenase | Back alignment and domain information |
|---|
| >gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family | Back alignment and domain information |
|---|
| >gnl|CDD|234421 TIGR03970, Rv0697, dehydrogenase, Rv0697 family | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
| >gnl|CDD|215420 PLN02785, PLN02785, Protein HOTHEAD | Back alignment and domain information |
|---|
| >gnl|CDD|131515 TIGR02462, pyranose_ox, pyranose oxidase | Back alignment and domain information |
|---|
| >gnl|CDD|131515 TIGR02462, pyranose_ox, pyranose oxidase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 801 | |||
| KOG1238|consensus | 623 | 100.0 | ||
| TIGR01810 | 532 | betA choline dehydrogenase. This enzyme is a membe | 100.0 | |
| PRK02106 | 560 | choline dehydrogenase; Validated | 100.0 | |
| COG2303 | 542 | BetA Choline dehydrogenase and related flavoprotei | 100.0 | |
| PLN02785 | 587 | Protein HOTHEAD | 100.0 | |
| KOG1238|consensus | 623 | 100.0 | ||
| TIGR02462 | 544 | pyranose_ox pyranose oxidase. Pyranose oxidase (al | 100.0 | |
| PF00732 | 296 | GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 | 100.0 | |
| TIGR01810 | 532 | betA choline dehydrogenase. This enzyme is a membe | 100.0 | |
| PF05199 | 144 | GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078 | 100.0 | |
| PRK02106 | 560 | choline dehydrogenase; Validated | 100.0 | |
| PF05199 | 144 | GMC_oxred_C: GMC oxidoreductase; InterPro: IPR0078 | 99.97 | |
| PLN02785 | 587 | Protein HOTHEAD | 99.97 | |
| COG2303 | 542 | BetA Choline dehydrogenase and related flavoprotei | 99.95 | |
| TIGR02462 | 544 | pyranose_ox pyranose oxidase. Pyranose oxidase (al | 99.71 | |
| PRK12835 | 584 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.72 | |
| PRK12837 | 513 | 3-ketosteroid-delta-1-dehydrogenase; Provisional | 96.54 | |
| PRK07843 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.24 | |
| PRK12844 | 557 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 96.06 | |
| TIGR01813 | 439 | flavo_cyto_c flavocytochrome c. This model describ | 95.84 | |
| PF01266 | 358 | DAO: FAD dependent oxidoreductase; InterPro: IPR00 | 95.53 | |
| PRK06481 | 506 | fumarate reductase flavoprotein subunit; Validated | 95.53 | |
| PRK07121 | 492 | hypothetical protein; Validated | 95.45 | |
| PRK12845 | 564 | 3-ketosteroid-delta-1-dehydrogenase; Reviewed | 95.23 | |
| PRK06134 | 581 | putative FAD-binding dehydrogenase; Reviewed | 94.67 | |
| PRK12839 | 572 | hypothetical protein; Provisional | 94.63 | |
| PRK12843 | 578 | putative FAD-binding dehydrogenase; Reviewed | 94.55 | |
| PF00890 | 417 | FAD_binding_2: FAD binding domain of the Pfam fami | 94.36 | |
| PRK11101 | 546 | glpA sn-glycerol-3-phosphate dehydrogenase subunit | 94.09 | |
| PRK08274 | 466 | tricarballylate dehydrogenase; Validated | 94.03 | |
| PRK06175 | 433 | L-aspartate oxidase; Provisional | 93.98 | |
| PF06039 | 488 | Mqo: Malate:quinone oxidoreductase (Mqo); InterPro | 93.76 | |
| PRK07395 | 553 | L-aspartate oxidase; Provisional | 93.29 | |
| PRK12842 | 574 | putative succinate dehydrogenase; Reviewed | 93.24 | |
| PRK13977 | 576 | myosin-cross-reactive antigen; Provisional | 92.95 | |
| PLN02815 | 594 | L-aspartate oxidase | 92.54 | |
| TIGR02734 | 502 | crtI_fam phytoene desaturase. Phytoene is converte | 92.44 | |
| TIGR01816 | 565 | sdhA_forward succinate dehydrogenase, flavoprotein | 92.12 | |
| PRK05675 | 570 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.94 | |
| TIGR01811 | 603 | sdhA_Bsu succinate dehydrogenase or fumarate reduc | 91.77 | |
| PRK07573 | 640 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.53 | |
| PRK09078 | 598 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.17 | |
| PRK05945 | 575 | sdhA succinate dehydrogenase flavoprotein subunit; | 91.11 | |
| PRK12834 | 549 | putative FAD-binding dehydrogenase; Reviewed | 91.09 | |
| COG0579 | 429 | Predicted dehydrogenase [General function predicti | 90.95 | |
| PRK08958 | 588 | sdhA succinate dehydrogenase flavoprotein subunit; | 90.92 | |
| PRK06263 | 543 | sdhA succinate dehydrogenase flavoprotein subunit; | 90.7 | |
| PRK06452 | 566 | sdhA succinate dehydrogenase flavoprotein subunit; | 90.47 | |
| PTZ00139 | 617 | Succinate dehydrogenase [ubiquinone] flavoprotein | 90.38 | |
| PRK07512 | 513 | L-aspartate oxidase; Provisional | 90.34 | |
| PRK09077 | 536 | L-aspartate oxidase; Provisional | 90.34 | |
| TIGR03377 | 516 | glycerol3P_GlpA glycerol-3-phosphate dehydrogenase | 90.24 | |
| PRK07803 | 626 | sdhA succinate dehydrogenase flavoprotein subunit; | 89.92 | |
| PLN00128 | 635 | Succinate dehydrogenase [ubiquinone] flavoprotein | 89.7 | |
| PTZ00306 | 1167 | NADH-dependent fumarate reductase; Provisional | 89.5 | |
| TIGR02485 | 432 | CobZ_N-term precorrin 3B synthase CobZ. CobZ is es | 89.39 | |
| TIGR00551 | 488 | nadB L-aspartate oxidase. L-aspartate oxidase is t | 89.15 | |
| PRK08626 | 657 | fumarate reductase flavoprotein subunit; Provision | 89.09 | |
| COG0029 | 518 | NadB Aspartate oxidase [Coenzyme metabolism] | 89.04 | |
| PRK08275 | 554 | putative oxidoreductase; Provisional | 89.01 | |
| PRK09231 | 582 | fumarate reductase flavoprotein subunit; Validated | 88.74 | |
| TIGR01176 | 580 | fum_red_Fp fumarate reductase, flavoprotein subuni | 88.63 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 88.46 | |
| KOG2404|consensus | 477 | 87.81 | ||
| TIGR01812 | 566 | sdhA_frdA_Gneg succinate dehydrogenase or fumarate | 87.78 | |
| PRK08205 | 583 | sdhA succinate dehydrogenase flavoprotein subunit; | 87.6 | |
| PRK13339 | 497 | malate:quinone oxidoreductase; Reviewed | 87.38 | |
| PRK06854 | 608 | adenylylsulfate reductase subunit alpha; Validated | 87.19 | |
| PRK06069 | 577 | sdhA succinate dehydrogenase flavoprotein subunit; | 87.19 | |
| PF13738 | 203 | Pyr_redox_3: Pyridine nucleotide-disulphide oxidor | 86.96 | |
| PRK07057 | 591 | sdhA succinate dehydrogenase flavoprotein subunit; | 86.78 | |
| PRK05257 | 494 | malate:quinone oxidoreductase; Validated | 86.39 | |
| PRK08641 | 589 | sdhA succinate dehydrogenase flavoprotein subunit; | 86.03 | |
| TIGR01320 | 483 | mal_quin_oxido malate:quinone-oxidoreductase. This | 86.02 | |
| TIGR02061 | 614 | aprA adenosine phosphosulphate reductase, alpha su | 85.89 | |
| TIGR03378 | 419 | glycerol3P_GlpB glycerol-3-phosphate dehydrogenase | 85.29 | |
| TIGR02352 | 337 | thiamin_ThiO glycine oxidase ThiO. This family con | 84.35 | |
| PRK08071 | 510 | L-aspartate oxidase; Provisional | 83.92 | |
| PRK07804 | 541 | L-aspartate oxidase; Provisional | 83.8 | |
| PLN02464 | 627 | glycerol-3-phosphate dehydrogenase | 83.4 | |
| PRK05329 | 422 | anaerobic glycerol-3-phosphate dehydrogenase subun | 82.24 | |
| PTZ00383 | 497 | malate:quinone oxidoreductase; Provisional | 81.6 | |
| PRK13800 | 897 | putative oxidoreductase/HEAT repeat-containing pro | 80.78 | |
| COG0578 | 532 | GlpA Glycerol-3-phosphate dehydrogenase [Energy pr | 80.57 |
| >KOG1238|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-100 Score=839.44 Aligned_cols=531 Identities=46% Similarity=0.743 Sum_probs=479.9
Q ss_pred ccccccc-cccccCccccccccccCCCCC---------------------------ccCCcccccCcCcccccCCCeEEe
Q psy14643 255 KCADMIK-DTWSQGENKLYANVTPDGIRR---------------------------RADSIQAEKQPGQCQAMVKQRCRW 306 (801)
Q Consensus 255 ~~a~~i~-~~~~~g~~v~A~rLse~g~~~---------------------------~~~~y~~~~~~~~~~~~~~~~~~~ 306 (801)
...|+|+ ..++|| ||||+||||+++++ +.|.|.++|+..+|+.+.++.+.|
T Consensus 56 ~~yDyIVVGgGtAG-cvlAarLSEn~~~~VLLLEaGg~~~~~~~~p~~~~~~q~s~~dw~y~t~Ps~~ac~~m~~~~c~w 134 (623)
T KOG1238|consen 56 SSYDYIVVGGGTAG-CVLAARLSENPNWSVLLLEAGGDPPLYSDPPLLAANLQLSLYDWSYHTEPSQHACLAMSEDRCYW 134 (623)
T ss_pred cCCCEEEECCCchh-HHHHHhhccCCCceEEEEecCCCCcccccchHHHHHhccccccccCcCccChhhhhhhcCCceec
Confidence 3456665 456888 99999999998876 246999999999999999999999
Q ss_pred cCCCccCchhHhcccEEecCChhhHHHHHHcCCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCCCCChHH
Q psy14643 307 PRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNPYKSQVV 386 (801)
Q Consensus 307 ~~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~Ws~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 386 (801)
+|||+|||||++|+|+|.|+++.|||+|++.|+++|+|++++|||+|+|+...+.....++|+..|++.++...+.+++.
T Consensus 135 pRGrVLGGsS~iN~m~Y~RG~r~Dyd~W~~~gnpgW~y~~vl~yf~k~E~~~~~~~~~~~y~~~~g~~~ve~~~~~~~~~ 214 (623)
T KOG1238|consen 135 PRGRVLGGSSVLNAMFYVRGNRRDYDRWAAEGNPGWSYDEVLPYFKKSEDKVVPDPELTPYHGAGGPLLVEAGVYPNNLF 214 (623)
T ss_pred CccceecccccccceEEecCCccchHHHHHhcCCCCCHHHHHHHHHHHhhccCCCcccCcccccCCcceeccccccCchh
Confidence 99999999999999999999999999999999999999999999999999988776667799999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcccceeecccccCCeechhhHHhhccccC-CCCeEEeeCceEEEEEeeCCCCeEEEEE
Q psy14643 387 DAFLESSKYVNQSTIDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPVRN-RPNLHISLNSQVTRVLIDSESKKAYGVE 465 (801)
Q Consensus 387 ~~~~~a~~~~G~~~~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~-~~nl~v~~~a~V~rI~~d~~~~~a~gV~ 465 (801)
..|.++..++|.+..|+|| ....|+...+.+.++|.|+|+..+|+.|+.. |+||++..++.|+||.+|..++++.||+
T Consensus 215 ~~~~~ag~e~G~~~~D~nG-~~~tg~~~l~~t~~~g~R~s~~~a~l~~~~~~R~NL~~~~~~~vtrvl~D~~~~~a~gv~ 293 (623)
T KOG1238|consen 215 TAFHRAGTEIGGSIFDRNG-ERHTGASLLQYTIRNGIRVSLAKAYLKPIRLTRPNLHISRNAAVTRVLIDPAGKRAKGVE 293 (623)
T ss_pred hHhHHhHHhcCCCccCCCC-ccccchhhhhccccCCEEEEehhhhhhhhhccCccccccccceEEEEEEcCCCceEEEEE
Confidence 9999999999988889999 9999999999999999999999999999987 8999999999999999998889999999
Q ss_pred EEEC-CEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccceEEEEeCCccccch
Q psy14643 466 FVKN-GKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFTHNTTELFNY 543 (801)
Q Consensus 466 ~~~~-g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~~~~~~~~~~~~~~~ 543 (801)
+..+ ++.++++|+||||||||||+||||||+|||||+++|+++|||++.|+| ||+||+||+.. .+......+.....
T Consensus 294 ~~~~~~~~~~v~a~kEVILSAGAi~SPQLLMLSGIGP~~~L~~~gIpvv~dLP~VG~nLqDH~~~-~~~~~~~~~~~~~~ 372 (623)
T KOG1238|consen 294 FVRDGGKEHTVKARKEVILSAGAINSPQLLMLSGIGPADHLKKLGIPVVLDLPGVGQNLQDHPMN-PGFVFSTNPVELSL 372 (623)
T ss_pred EEecCceeeeecccceEEEeccccCCHHHHHHcCCCcHHHHHhcCCCeeccCccccccccccccc-ceeeecCCCccccc
Confidence 9988 899999999999999999999999999999999999999999999999 99999999997 44444433433333
Q ss_pred hhHHH--HHHHHHhhccCCCCCCCCCccccEEEEEecCCCCC-CCCCCeeeeeeccccccCCccccccccCcchhhHhhh
Q psy14643 544 NTMLA--QAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTD-PSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQA 620 (801)
Q Consensus 544 ~~~~~--~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (801)
..+.. .+.+|+.. +.||+.... .+..+|.++..... .++||+++++.......+.+..+....+ ++++.+
T Consensus 373 ~~~~~~~~~~~yl~~---~~G~~~~~~-~e~~~f~~t~~~~~~~~~PD~~~~~~~~~~~~~~~~~~~~~~~---~~y~~~ 445 (623)
T KOG1238|consen 373 IRLVGITTVGQYLEG---GSGPLASPG-VETLGFINTVSSNLSLDWPDIELHFVAGSLSSDGLTALRKALG---EIYQAL 445 (623)
T ss_pred cccccchHHHHHHHc---CCCCcccCc-ceeeEEeccccccCcCCCCCeeEEeccccccccchhhhhhhcc---hHHHHh
Confidence 22222 77888888 899998444 78999998877643 5799999999888877776555555444 666667
Q ss_pred hhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHHHHHHHHHHHHhcCccccccccccCCCCC
Q psy14643 621 YKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPL 700 (801)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 700 (801)
+........+.++..+.+|.|+|+|.|.++||.+.|+|++||+.+|+|++.++++++.+.++.++.+|++++.++.....
T Consensus 446 ~~~~~~~~~~~i~~~~l~P~SrG~l~L~s~nP~~~P~I~~NY~~~p~Dv~~~vegi~~~~~l~~s~af~~~~~r~~~~~~ 525 (623)
T KOG1238|consen 446 FGELTNSDSFVIFPKLLRPKSRGRLKLRSTNPRDNPLITPNYFTHPEDVATLVEGIRTIIRLSNSKAFQRFGARLWKKPV 525 (623)
T ss_pred hhhhhcCceeEEeehhcCCCccceEEecCCCCCcCceeccCcCCCHHHHHHHHHHHHHHHHHHcCHHHHHhcchhccccC
Confidence 76666666788888889999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEEeeccCCCCCCCCCChHHHHHHH
Q psy14643 701 PGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIG 780 (801)
Q Consensus 701 p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V~DaSvfP~~~~~NPtlTi~AlA 780 (801)
|+|+...+.+|++|+||+|....+.||++|||+||++.||++|||+++||||++||||+||||||.+|++||++|++|||
T Consensus 526 ~~c~~~~~~sd~yw~c~~R~~~~TiyH~~GtckMGp~~D~~aVVD~~lrV~Gv~~LRVVDaSimP~~psgN~nA~v~MIg 605 (623)
T KOG1238|consen 526 PGCDLLAFLSDAYWECFCRHTVVTIYHYSGTCKMGPSSDPTAVVDPQLRVHGVRGLRVVDASIMPESPSGNPNAPVMMIG 605 (623)
T ss_pred CCcccccCCCHHHHHHHHHhccceeeccCCceEeCCccCCCcccCCcceeccccCceEeeccccCCCCCCCccHHHHHHH
Confidence 99999899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCC
Q psy14643 781 EKCADMIKDTWSQGE 795 (801)
Q Consensus 781 ~R~Ad~I~~~~~~~~ 795 (801)
||+||+|++++...+
T Consensus 606 ek~ad~Ik~~~~~~~ 620 (623)
T KOG1238|consen 606 EKAADMIKEEWLANK 620 (623)
T ss_pred HHHHHHHHHHhhhcC
Confidence 999999999987654
|
|
| >TIGR01810 betA choline dehydrogenase | Back alignment and domain information |
|---|
| >PRK02106 choline dehydrogenase; Validated | Back alignment and domain information |
|---|
| >COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02785 Protein HOTHEAD | Back alignment and domain information |
|---|
| >KOG1238|consensus | Back alignment and domain information |
|---|
| >TIGR02462 pyranose_ox pyranose oxidase | Back alignment and domain information |
|---|
| >PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >TIGR01810 betA choline dehydrogenase | Back alignment and domain information |
|---|
| >PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >PRK02106 choline dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PF05199 GMC_oxred_C: GMC oxidoreductase; InterPro: IPR007867 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] | Back alignment and domain information |
|---|
| >PLN02785 Protein HOTHEAD | Back alignment and domain information |
|---|
| >COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02462 pyranose_ox pyranose oxidase | Back alignment and domain information |
|---|
| >PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >TIGR01813 flavo_cyto_c flavocytochrome c | Back alignment and domain information |
|---|
| >PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 | Back alignment and domain information |
|---|
| >PRK06481 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >PRK07121 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK06134 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK12839 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK12843 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PF00890 FAD_binding_2: FAD binding domain of the Pfam family | Back alignment and domain information |
|---|
| >PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional | Back alignment and domain information |
|---|
| >PRK08274 tricarballylate dehydrogenase; Validated | Back alignment and domain information |
|---|
| >PRK06175 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle | Back alignment and domain information |
|---|
| >PRK07395 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK12842 putative succinate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >PRK13977 myosin-cross-reactive antigen; Provisional | Back alignment and domain information |
|---|
| >PLN02815 L-aspartate oxidase | Back alignment and domain information |
|---|
| >TIGR02734 crtI_fam phytoene desaturase | Back alignment and domain information |
|---|
| >TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E | Back alignment and domain information |
|---|
| >PRK05675 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup | Back alignment and domain information |
|---|
| >PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK12834 putative FAD-binding dehydrogenase; Reviewed | Back alignment and domain information |
|---|
| >COG0579 Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >PRK07512 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK09077 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >TIGR03377 glycerol3P_GlpA glycerol-3-phosphate dehydrogenase, anaerobic, A subunit | Back alignment and domain information |
|---|
| >PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit | Back alignment and domain information |
|---|
| >PTZ00306 NADH-dependent fumarate reductase; Provisional | Back alignment and domain information |
|---|
| >TIGR02485 CobZ_N-term precorrin 3B synthase CobZ | Back alignment and domain information |
|---|
| >TIGR00551 nadB L-aspartate oxidase | Back alignment and domain information |
|---|
| >PRK08626 fumarate reductase flavoprotein subunit; Provisional | Back alignment and domain information |
|---|
| >COG0029 NadB Aspartate oxidase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK08275 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK09231 fumarate reductase flavoprotein subunit; Validated | Back alignment and domain information |
|---|
| >TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit | Back alignment and domain information |
|---|
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
| >KOG2404|consensus | Back alignment and domain information |
|---|
| >TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup | Back alignment and domain information |
|---|
| >PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK13339 malate:quinone oxidoreductase; Reviewed | Back alignment and domain information |
|---|
| >PRK06854 adenylylsulfate reductase subunit alpha; Validated | Back alignment and domain information |
|---|
| >PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A | Back alignment and domain information |
|---|
| >PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >PRK05257 malate:quinone oxidoreductase; Validated | Back alignment and domain information |
|---|
| >PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed | Back alignment and domain information |
|---|
| >TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase | Back alignment and domain information |
|---|
| >TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit | Back alignment and domain information |
|---|
| >TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit | Back alignment and domain information |
|---|
| >TIGR02352 thiamin_ThiO glycine oxidase ThiO | Back alignment and domain information |
|---|
| >PRK08071 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PRK07804 L-aspartate oxidase; Provisional | Back alignment and domain information |
|---|
| >PLN02464 glycerol-3-phosphate dehydrogenase | Back alignment and domain information |
|---|
| >PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated | Back alignment and domain information |
|---|
| >PTZ00383 malate:quinone oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 801 | ||||
| 3fim_B | 566 | Crystal Structure Of Aryl-Alcohol-Oxidase From Pleu | 2e-44 | ||
| 3nne_A | 546 | Crystal Structure Of Choline Oxidase S101a Mutant L | 1e-41 | ||
| 2jbv_A | 546 | Crystal Structure Of Choline Oxidase Reveals Insigh | 1e-41 | ||
| 3ljp_A | 546 | Crystal Structure Of Choline Oxidase V464a Mutant L | 3e-41 | ||
| 3q9t_A | 577 | Crystal Structure Analysis Of Formate Oxidase Lengt | 2e-37 | ||
| 3t37_A | 526 | Crystal Structure Of Pyridoxine 4-Oxidase From Meso | 4e-25 | ||
| 3t37_A | 526 | Crystal Structure Of Pyridoxine 4-Oxidase From Meso | 5e-08 | ||
| 1cf3_A | 583 | Glucose Oxidase From Apergillus Niger Length = 583 | 6e-20 | ||
| 1cf3_A | 583 | Glucose Oxidase From Apergillus Niger Length = 583 | 4e-09 | ||
| 1gpe_A | 587 | Glucose Oxidase From Penicillium Amagasakiense Leng | 1e-17 | ||
| 1gpe_A | 587 | Glucose Oxidase From Penicillium Amagasakiense Leng | 2e-07 | ||
| 3red_A | 521 | 3.0 A Structure Of The Prunus Mume Hydroxynitrile L | 2e-17 | ||
| 1naa_A | 541 | Cellobiose Dehydrogenase Flavoprotein Fragment In C | 7e-11 | ||
| 1kdg_A | 546 | Crystal Structure Of The Flavin Domain Of Cellobios | 7e-11 | ||
| 1ju2_A | 536 | Crystal Structure Of The Hydroxynitrile Lyase From | 4e-10 | ||
| 1ju2_A | 536 | Crystal Structure Of The Hydroxynitrile Lyase From | 5e-07 | ||
| 3gdn_A | 521 | Almond Hydroxynitrile Lyase In Complex With Benzald | 4e-10 | ||
| 3gdn_A | 521 | Almond Hydroxynitrile Lyase In Complex With Benzald | 7e-07 |
| >pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus Eryingii Length = 566 | Back alignment and structure |
|
| >pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant Length = 546 | Back alignment and structure |
| >pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism Length = 546 | Back alignment and structure |
| >pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant Length = 546 | Back alignment and structure |
| >pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase Length = 577 | Back alignment and structure |
| >pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti Length = 526 | Back alignment and structure |
| >pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti Length = 526 | Back alignment and structure |
| >pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger Length = 583 | Back alignment and structure |
| >pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger Length = 583 | Back alignment and structure |
| >pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense Length = 587 | Back alignment and structure |
| >pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense Length = 587 | Back alignment and structure |
| >pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 Length = 521 | Back alignment and structure |
| >pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam Length = 541 | Back alignment and structure |
| >pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase Length = 546 | Back alignment and structure |
| >pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond Length = 536 | Back alignment and structure |
| >pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond Length = 536 | Back alignment and structure |
| >pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde Length = 521 | Back alignment and structure |
| >pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde Length = 521 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Length = 566 | Back alignment and structure |
|---|
Score = 542 bits (1400), Expect = 0.0
Identities = 129/525 (24%), Positives = 228/525 (43%), Gaps = 53/525 (10%)
Query: 290 EKQPGQCQAMVKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVY 348
Q G + +PRG+ +GGSS ++YM+ RG+ D+DR+AA+ G+ GW++D +
Sbjct: 66 TAQAG----YNGRSIAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQ 121
Query: 349 PYFLKIENMTIPE-------LRNSPHHSTTGYVPVGYNPYKSQVVDAFLESSK---YVNQ 398
+ K E + P H T G V + + + + D L +++
Sbjct: 122 QFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRVLATTQEQSEEFF 181
Query: 399 STIDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLID--- 455
D LG S A+ NG+R SS AY+ P ++RPNL + +N+QVT+++
Sbjct: 182 FNPDMGTGHP-LGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTT 240
Query: 456 --SESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVE 513
+ + + V A+KE++LSAG++ TP +L SG+G L S+ I
Sbjct: 241 NGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTI 300
Query: 514 RDLP-VGENLQDHITMAGLAFTHNTTELFN--YNTMLAQAFTMMYNISKGGGMGSIPGGV 570
+ P VG NL DH+ + AF N+ + F+ + + + G +
Sbjct: 301 VNNPSVGRNLSDHL-LLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIA- 358
Query: 571 EGIGFVQTKYNT-------DPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKH 623
+ +++ N+ DP+ + ++ ++ A
Sbjct: 359 NHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFS---------------NQWFHPAIPR 403
Query: 624 LEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLS 683
+ + ++ L+ P +RG I L + NP PL+ Y E D++T+++ +K +
Sbjct: 404 PDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFL 463
Query: 684 RTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTV 743
+ + + P + + D R T+ H GT M V
Sbjct: 464 SGQAWADFVIRPF---DPRLR--DPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGV 518
Query: 744 VDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIK 788
VD +L+V G+ LR+ D S++P AH PIY++G++ AD+IK
Sbjct: 519 VDPDLKVKGVDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIK 563
|
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Length = 566 | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Length = 587 | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Length = 587 | Back alignment and structure |
|---|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Length = 583 | Back alignment and structure |
|---|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Length = 583 | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Length = 577 | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Length = 577 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Length = 546 | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Length = 526 | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Length = 526 | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Length = 536 | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Length = 536 | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Length = 546 | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Length = 546 | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 801 | |||
| 3fim_B | 566 | ARYL-alcohol oxidase; AAO, lignin degradation, oxi | 100.0 | |
| 3qvp_A | 583 | Glucose oxidase; oxidoreductase; HET: NAG BMA MAN | 100.0 | |
| 3q9t_A | 577 | Choline dehydrogenase and related flavoproteins; g | 100.0 | |
| 1gpe_A | 587 | Protein (glucose oxidase); oxidoreductase(flavopro | 100.0 | |
| 2jbv_A | 546 | Choline oxidase; alcohol oxidation, flavoenyzme ox | 100.0 | |
| 3t37_A | 526 | Probable dehydrogenase; BET alpha beta fold, ADP b | 100.0 | |
| 1ju2_A | 536 | HydroxynitrIle lyase; flavin, GMC oxidoreductase, | 100.0 | |
| 1kdg_A | 546 | CDH, cellobiose dehydrogenase; GMC oxidoreductase, | 100.0 | |
| 1n4w_A | 504 | CHOD, cholesterol oxidase; flavoenzyme, steroid me | 100.0 | |
| 1coy_A | 507 | Cholesterol oxidase; oxidoreductase(oxygen recepto | 100.0 | |
| 3pl8_A | 623 | Pyranose 2-oxidase; substrate complex, H167A mutan | 100.0 | |
| 3fim_B | 566 | ARYL-alcohol oxidase; AAO, lignin degradation, oxi | 100.0 | |
| 3q9t_A | 577 | Choline dehydrogenase and related flavoproteins; g | 100.0 | |
| 3qvp_A | 583 | Glucose oxidase; oxidoreductase; HET: NAG BMA MAN | 100.0 | |
| 2jbv_A | 546 | Choline oxidase; alcohol oxidation, flavoenyzme ox | 100.0 | |
| 3t37_A | 526 | Probable dehydrogenase; BET alpha beta fold, ADP b | 100.0 | |
| 1gpe_A | 587 | Protein (glucose oxidase); oxidoreductase(flavopro | 99.98 | |
| 1kdg_A | 546 | CDH, cellobiose dehydrogenase; GMC oxidoreductase, | 99.97 | |
| 1ju2_A | 536 | HydroxynitrIle lyase; flavin, GMC oxidoreductase, | 99.97 | |
| 1n4w_A | 504 | CHOD, cholesterol oxidase; flavoenzyme, steroid me | 99.91 | |
| 1coy_A | 507 | Cholesterol oxidase; oxidoreductase(oxygen recepto | 99.89 | |
| 3pl8_A | 623 | Pyranose 2-oxidase; substrate complex, H167A mutan | 99.83 | |
| 4at0_A | 510 | 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore | 97.96 | |
| 1qo8_A | 566 | Flavocytochrome C3 fumarate reductase; oxidoreduct | 96.65 | |
| 1y0p_A | 571 | Fumarate reductase flavoprotein subunit; flavocyto | 96.35 | |
| 4dgk_A | 501 | Phytoene dehydrogenase; the FAD/NAD(P)-binding ros | 95.51 | |
| 1d4d_A | 572 | Flavocytochrome C fumarate reductase; oxidoreducta | 92.64 | |
| 2gag_B | 405 | Heterotetrameric sarcosine oxidase beta-subunit; f | 92.25 | |
| 2h88_A | 621 | Succinate dehydrogenase flavoprotein subunit; comp | 91.2 | |
| 3da1_A | 561 | Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 | 90.25 | |
| 1kf6_A | 602 | Fumarate reductase flavoprotein; respiration, fuma | 89.63 | |
| 2wdq_A | 588 | Succinate dehydrogenase flavoprotein subunit; succ | 88.97 | |
| 1chu_A | 540 | Protein (L-aspartate oxidase); flavoenzyme, NAD bi | 88.9 | |
| 2rgh_A | 571 | Alpha-glycerophosphate oxidase; flavoprotein oxida | 88.38 | |
| 3dme_A | 369 | Conserved exported protein; structural genomics, P | 87.16 | |
| 2bs2_A | 660 | Quinol-fumarate reductase flavoprotein subunit A; | 87.03 | |
| 1rp0_A | 284 | ARA6, thiazole biosynthetic enzyme; protein ligand | 85.3 | |
| 3dje_A | 438 | Fructosyl amine: oxygen oxidoreductase; fructosyl- | 84.68 | |
| 3cgv_A | 397 | Geranylgeranyl reductase related protein; NP_39399 | 84.11 | |
| 3e1t_A | 512 | Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro | 82.79 | |
| 3ka7_A | 425 | Oxidoreductase; structural genomics, PSI-2, protei | 81.98 | |
| 3gyx_A | 662 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 81.24 | |
| 2i0z_A | 447 | NAD(FAD)-utilizing dehydrogenases; structural geno | 80.85 | |
| 1jnr_A | 643 | Adenylylsulfate reductase; oxidoreductase; HET: FA | 80.55 | |
| 3atr_A | 453 | Conserved archaeal protein; saturating double bond | 80.54 | |
| 1y56_B | 382 | Sarcosine oxidase; dehydrogenase, protein-protein | 80.3 |
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-89 Score=788.18 Aligned_cols=499 Identities=28% Similarity=0.443 Sum_probs=421.6
Q ss_pred ccccc-cccccCccccccccccCC-CCC-----------------------------ccCCcccccCcCcccccCCCeEE
Q psy14643 257 ADMIK-DTWSQGENKLYANVTPDG-IRR-----------------------------RADSIQAEKQPGQCQAMVKQRCR 305 (801)
Q Consensus 257 a~~i~-~~~~~g~~v~A~rLse~g-~~~-----------------------------~~~~y~~~~~~~~~~~~~~~~~~ 305 (801)
.|+|+ ..++|| ||+|.||||++ .++ +.|.|.++||.+ ++++.+.
T Consensus 3 yD~IIVG~G~aG-~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 3 FDYVVVGAGNAG-NVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp EEEEESCCSTTH-HHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred cCEEEECCcHHH-HHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 35554 556777 99999999953 333 135788999987 8999999
Q ss_pred ecCCCccCchhHhcccEEecCChhhHHHHHHc-CCCCCCccchHHHHHHhhcCCCCCC-------CCCCCCCCCCcEeee
Q psy14643 306 WPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPEL-------RNSPHHSTTGYVPVG 377 (801)
Q Consensus 306 ~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~-g~~~Ws~~~l~pyy~k~E~~~~~~~-------~~~~~~g~~g~~~~~ 377 (801)
|+|||+|||||+||+|+|.|+++.|||.|+.. |+++|+|++|+|||+|+|++..+.. .++..||..||++++
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 9999999999999999999976421 134789999999999
Q ss_pred cCCCCChHHHHHHHHHHHc--CCCC-CCCCCCCCcccceeecccccCCeechhhHHhhccccCCCCeEEeeCceEEEEEe
Q psy14643 378 YNPYKSQVVDAFLESSKYV--NQST-IDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLI 454 (801)
Q Consensus 378 ~~~~~~~~~~~~~~a~~~~--G~~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~rI~~ 454 (801)
.+.+..++...|+++++++ |++. .|+|+ +...|+++++.+|++|.|+|+..+||.|+.+++||+|++++.|+||++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~-~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~ 236 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGT-GHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVN 236 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGG-SCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCC-CCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEe
Confidence 9998899999999999999 9998 57888 788999999999999999999999999999999999999999999999
Q ss_pred e---CCCCeEEEEEEEEC-C-EEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-ccccccccccc
Q psy14643 455 D---SESKKAYGVEFVKN-G-KKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITM 528 (801)
Q Consensus 455 d---~~~~~a~gV~~~~~-g-~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~ 528 (801)
+ ++.++|+||++... | +.++++|+||||||||||+||||||+|||||+++|+++||++++|+| ||+|||||+.+
T Consensus 237 ~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~ 316 (566)
T 3fim_B 237 SGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL 316 (566)
T ss_dssp CEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE
T ss_pred ecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc
Confidence 8 22268999999953 5 88899999999999999999999999999999999999999999999 99999999986
Q ss_pred ceEEEEeCCccccc---hhh-HH-HHHHHHHhhccCCCCCCCCCccccEEEEEecCCC-----------CCCCCCCeeee
Q psy14643 529 AGLAFTHNTTELFN---YNT-ML-AQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYN-----------TDPSYPDIEFI 592 (801)
Q Consensus 529 ~~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~-----------~~~~~p~~~~~ 592 (801)
.+.+..+...... ... .. ....+|+.. ++||++ ....+..+|.+.... .....|+++++
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~ 391 (566)
T 3fim_B 317 -PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNT---RTGPLT-ALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETI 391 (566)
T ss_dssp -CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHH---SCSGGG-CCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEE
T ss_pred -eEEEEeCCCcccchhhcChHHHHHHHHHHHhc---CCCCcc-cChhhheeeeccccchhhhhhhccccccCCCCCEEEE
Confidence 6777776543321 111 11 266788888 999998 455778889876421 01346788776
Q ss_pred eeccccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHH
Q psy14643 593 FAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTL 672 (801)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~ 672 (801)
+.+..... .+........+++...+++|.|||+|+|+++||++.|+|+++|+.++.|++.+
T Consensus 392 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~ 452 (566)
T 3fim_B 392 FSNQWFHP-------------------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTM 452 (566)
T ss_dssp EESSCCCT-------------------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHH
T ss_pred ecccchhh-------------------cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHH
Confidence 54321110 00011123567788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeec
Q psy14643 673 VEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHG 752 (801)
Q Consensus 673 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G 752 (801)
+++++.+++++++++++.+..... .|++ ....+|++|++|+|....+.+|++||||||+++++++|||++|||||
T Consensus 453 ~~~~~~~~~i~~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~G 527 (566)
T 3fim_B 453 IQAVKSNLRFLSGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKG 527 (566)
T ss_dssp HHHHHHHHHHHTSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTT
T ss_pred HHHHHHHHHHHhCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEcc
Confidence 999999999999999988764433 2331 23679999999999999999999999999976664599999999999
Q ss_pred cCCcEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14643 753 IKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDT 790 (801)
Q Consensus 753 ~~NL~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~ 790 (801)
++||||+|+||||+++++||++|+||||||+||+|+++
T Consensus 528 v~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 528 VDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999874
|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... | Back alignment and structure |
|---|
| >3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} | Back alignment and structure |
|---|
| >3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} | Back alignment and structure |
|---|
| >3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* | Back alignment and structure |
|---|
| >2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* | Back alignment and structure |
|---|
| >3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} | Back alignment and structure |
|---|
| >1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 | Back alignment and structure |
|---|
| >1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* | Back alignment and structure |
|---|
| >1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* | Back alignment and structure |
|---|
| >1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* | Back alignment and structure |
|---|
| >1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* | Back alignment and structure |
|---|
| >3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... | Back alignment and structure |
|---|
| >4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* | Back alignment and structure |
|---|
| >1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 | Back alignment and structure |
|---|
| >1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* | Back alignment and structure |
|---|
| >4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} | Back alignment and structure |
|---|
| >1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* | Back alignment and structure |
|---|
| >2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* | Back alignment and structure |
|---|
| >2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... | Back alignment and structure |
|---|
| >3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} | Back alignment and structure |
|---|
| >1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* | Back alignment and structure |
|---|
| >2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* | Back alignment and structure |
|---|
| >1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* | Back alignment and structure |
|---|
| >2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* | Back alignment and structure |
|---|
| >3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
| >2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* | Back alignment and structure |
|---|
| >1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 | Back alignment and structure |
|---|
| >3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* | Back alignment and structure |
|---|
| >3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} | Back alignment and structure |
|---|
| >3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} | Back alignment and structure |
|---|
| >2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 | Back alignment and structure |
|---|
| >1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* | Back alignment and structure |
|---|
| >3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* | Back alignment and structure |
|---|
| >1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 801 | ||||
| d1gpea1 | 391 | c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic | 2e-35 | |
| d1gpea1 | 391 | c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic | 5e-12 | |
| d1gpea1 | 391 | c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic | 5e-12 | |
| d1cf3a1 | 385 | c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper | 2e-34 | |
| d1cf3a1 | 385 | c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper | 6e-17 | |
| d1cf3a1 | 385 | c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper | 6e-17 | |
| d1ju2a1 | 351 | c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase { | 8e-34 | |
| d3coxa1 | 370 | c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of | 7e-28 | |
| d1n4wa1 | 367 | c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of | 4e-27 | |
| d2f5va1 | 379 | c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W | 2e-26 | |
| d2f5va1 | 379 | c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W | 7e-14 | |
| d2f5va1 | 379 | c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W | 7e-14 | |
| d1cf3a2 | 196 | d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus | 1e-24 | |
| d1cf3a2 | 196 | d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus | 1e-20 | |
| d1kdga1 | 360 | c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain | 7e-21 | |
| d1kdga1 | 360 | c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain | 5e-14 | |
| d1kdga1 | 360 | c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain | 5e-14 | |
| d1gpea2 | 196 | d.16.1.1 (A:329-524) Glucose oxidase {Penicillium | 8e-21 | |
| d1gpea2 | 196 | d.16.1.1 (A:329-524) Glucose oxidase {Penicillium | 2e-18 | |
| d1ju2a2 | 170 | d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond | 2e-17 | |
| d1ju2a2 | 170 | d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond | 2e-17 | |
| d1kdga2 | 181 | d.16.1.1 (A:513-693) Flavoprotein domain of flavoc | 3e-14 | |
| d1kdga2 | 181 | d.16.1.1 (A:513-693) Flavoprotein domain of flavoc | 1e-10 |
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Penicillium amagasakiense [TaxId: 63559]
Score = 136 bits (343), Expect = 2e-35
Identities = 62/243 (25%), Positives = 101/243 (41%), Gaps = 18/243 (7%)
Query: 302 QRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIP 360
+ GKG+GGS+++N +TR D W + G GW++D ++ Y K E P
Sbjct: 94 RTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTP 153
Query: 361 ELR--------NSPHHSTTGYVPVG---YNPYKSQVVDAFLESSKYVNQS-TIDYNQPEN 408
N+ H T G V G S ++ A + + + D+
Sbjct: 154 TAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHP 213
Query: 409 YLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSES--KKAYGVEF 466
+ N RV + A++ P R NL I V +VL + +A GV F
Sbjct: 214 RGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNF 273
Query: 467 VKNGKKRI-VFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP--VGENLQ 523
N VFA+ E++L+AG+ +P IL +SG+G + L+ + DLP + +
Sbjct: 274 GTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGICSMMS 333
Query: 524 DHI 526
+
Sbjct: 334 REL 336
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 | Back information, alignment and structure |
|---|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 | Back information, alignment and structure |
|---|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 | Back information, alignment and structure |
|---|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 | Back information, alignment and structure |
|---|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 351 | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 196 | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 196 | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 | Back information, alignment and structure |
|---|
| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 196 | Back information, alignment and structure |
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| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 196 | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 170 | Back information, alignment and structure |
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| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Length = 170 | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 181 | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 181 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 801 | |||
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 100.0 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 100.0 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 100.0 | |
| d1ju2a1 | 351 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 100.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 100.0 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 99.98 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 99.98 | |
| d1kdga2 | 181 | Flavoprotein domain of flavocytochrome cellobiose | 99.86 | |
| d1ju2a2 | 170 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 99.83 | |
| d1gpea2 | 196 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 99.8 | |
| d1cf3a2 | 196 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 99.79 | |
| d1kdga2 | 181 | Flavoprotein domain of flavocytochrome cellobiose | 99.65 | |
| d1ju2a2 | 170 | Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI | 99.61 | |
| d1gpea2 | 196 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 99.6 | |
| d1cf3a2 | 196 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 99.57 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 99.22 | |
| d1cf3a1 | 385 | Glucose oxidase {Aspergillus niger [TaxId: 5061]} | 99.14 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 98.65 | |
| d1gpea1 | 391 | Glucose oxidase {Penicillium amagasakiense [TaxId: | 98.56 | |
| d2f5va2 | 198 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 97.96 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 97.9 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 97.72 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 97.22 | |
| d1kf6a2 | 311 | Fumarate reductase {Escherichia coli [TaxId: 562]} | 96.9 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 96.54 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 95.52 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 94.72 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 92.96 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 92.18 | |
| d2f5va2 | 198 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 91.23 | |
| d1jnra2 | 356 | Adenylylsulfate reductase A subunit {Archaeon Arch | 91.11 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 90.68 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 89.37 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 89.0 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 87.76 | |
| d1chua2 | 305 | L-aspartate oxidase {Escherichia coli [TaxId: 562] | 85.62 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 85.55 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 84.67 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 81.18 | |
| d1fl2a2 | 126 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 80.57 |
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glucose oxidase species: Aspergillus niger [TaxId: 5061]
Probab=100.00 E-value=1.8e-52 Score=461.55 Aligned_cols=258 Identities=29% Similarity=0.441 Sum_probs=212.9
Q ss_pred cccccccccc-ccCccccccccccCCC-CCc-----------------------------cCCcccccCcCcccccCCCe
Q psy14643 255 KCADMIKDTW-SQGENKLYANVTPDGI-RRR-----------------------------ADSIQAEKQPGQCQAMVKQR 303 (801)
Q Consensus 255 ~~a~~i~~~~-~~g~~v~A~rLse~g~-~~~-----------------------------~~~y~~~~~~~~~~~~~~~~ 303 (801)
+-.|+|+-+. ++| ||+|+||||+|. +|+ .|.|.++++ + ++++.
T Consensus 16 ~tyD~IIVGsG~aG-~vlA~rLse~~~~~VLvLEaG~~~~~~~~~~~~~~~~~~~~~~~~dw~~~t~~~-~----~~~r~ 89 (385)
T d1cf3a1 16 RTVDYIIAGGGLTG-LTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVEL-A----TNNQT 89 (385)
T ss_dssp CEEEEEEECCSHHH-HHHHHHHTTSTTCCEEEEESSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCC-T----TTSCC
T ss_pred CeEEEEEECcCHHH-HHHHHHHHHCCCCeEEEECCCCCCCCCCccccCHhHHhhhcCCCCCcCccccCc-C----CCCce
Confidence 4467776554 566 999999999985 451 123444433 2 78899
Q ss_pred EEecCCCccCchhHhcccEEecCChhhHHHHHHc-CCCCCCccchHHHHHHhhcCCCCCC--------CCCCCCCCCCcE
Q psy14643 304 CRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPEL--------RNSPHHSTTGYV 374 (801)
Q Consensus 304 ~~~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~-g~~~Ws~~~l~pyy~k~E~~~~~~~--------~~~~~~g~~g~~ 374 (801)
+.+++|++|||||.||+|+|+|+++.||+.|+.. +..+|+|++|+|||+|+|++.++.. .+...|+..+++
T Consensus 90 ~~~~~G~~lGGsS~in~~~~~R~~~~d~d~w~~~~~~~gw~~~~l~Pyf~k~E~~~~~~~~~~~~~~~~~~~~~g~~~~~ 169 (385)
T d1cf3a1 90 ALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTV 169 (385)
T ss_dssp CEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSE
T ss_pred eeecccccccccceeeeeeeeccChhhhcccccccCCCcCchhhhHHHHHHHHhhcCCCcccccccccccccccCCcccc
Confidence 9999999999999999999999999999999988 6789999999999999999876531 245667888888
Q ss_pred eeecCC---CCChHHHHHHHHHHHcCCCC-CCCCCCCCcccceeecccc-cCCeechhhHHhhccccCCCCeEEeeCceE
Q psy14643 375 PVGYNP---YKSQVVDAFLESSKYVNQST-IDYNQPENYLGFSRIQATT-RNGKRVSSYHAYIEPVRNRPNLHISLNSQV 449 (801)
Q Consensus 375 ~~~~~~---~~~~~~~~~~~a~~~~G~~~-~~~~~~~~~~g~~~~~~~~-~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V 449 (801)
.+.... ...++.+.|.++++++|++. .++|+ ....+++.|+..+ ..+.|+++...|+.|+.+++|++|+++++|
T Consensus 170 ~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~d~n~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~~~~~nl~i~t~~~V 248 (385)
T d1cf3a1 170 HAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGC-GDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYV 248 (385)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTS-SCCCEEECCCBSBCTTCBBCCHHHHHTGGGTTCTTEEEEESCEE
T ss_pred cccccccccccCHHHHHHHHHHHHcCCCCcCCccc-ccccccccccccccccccchhhhhhhcCchhcCCcccccCCceE
Confidence 876543 45688999999999999998 57887 6666666665543 445666778889999999999999999999
Q ss_pred EEEEeeCCC--CeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCCcc
Q psy14643 450 TRVLIDSES--KKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLPVG 519 (801)
Q Consensus 450 ~rI~~d~~~--~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~pVG 519 (801)
+||+|++++ .||+||++. .+|+.++++|+||||||||||+||+|||+|||||+++|+++||++++|+|||
T Consensus 249 ~rI~~~~~~~~~ra~GV~~~~~~g~~~~v~A~keVILsAGAi~SP~LLl~SGIGp~~~L~~~gI~~~~dlP~g 321 (385)
T d1cf3a1 249 GKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVG 321 (385)
T ss_dssp EEEEEECSSSSCEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTT
T ss_pred EEEEEcCCCceeEEEEEEEEcCCCCEEEEEeCCEEEEcCchhhCHHHHHhcCCCcHHHHHHCCCCeEEECCcc
Confidence 999998753 389999997 5899999999999999999999999999999999999999999888776643
|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1kdga2 d.16.1.1 (A:513-693) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), substrate-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1ju2a2 d.16.1.1 (A:294-463) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} | Back information, alignment and structure |
|---|
| >d1gpea2 d.16.1.1 (A:329-524) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
| >d1cf3a2 d.16.1.1 (A:325-520) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
| >d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} | Back information, alignment and structure |
|---|
| >d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
| >d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
| >d2f5va2 d.16.1.1 (A:355-552) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
| >d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
| >d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|