Psyllid ID: psy146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MSHSNIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVGF
Secondary Structure (PSIPRED)
ccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccHHHHcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHcHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcHEEEcccccHHHHcccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
MSHSNIIRKLktlgyaspesfnpirekEFRNMVVWLEDQKIRIYKIEDRAelrklesphwmnsfhqyctdvglpitllstPLEQIEWLLGHAsrleyadnvdqyKSQTAEfvssnqssapkvvstnpldnlnfdspefkKGVNSLAEklkirphpnhltTLEACCKLISARLNedalahpefvipkgkpfpfleidngftlpdpvLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTvtanpktdtklgkvgf
Flexible Loop (DISEMBL)
mshsniirklktlgyaspesfnpirekefrnmVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEfvssnqssapkvVSTNPLDNLNFDSPEFKKGVNSLAEKlkirphpnhlTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQtvtanpktdtklgkvgf
Low Complexity Region (SEG)
MSHSNIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVGF
Disordered region (IsUnstruct)
*********LKTLGYA****FNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVD**********************************************LKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVT**************
Disordered Region (DISOPRED)
****NII*KLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYK*************HWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADN*******************************NFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARL********************LEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVGF
Disordered Region (DISEMBL)
MSHSNIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTA*************VSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVGF
Disordered Region (DISPRO)
***SNIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVS************NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPK****L*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSHSNIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVGF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
Q5R8I2	244	UPF0568 protein C14orf166	yes	N/A	0.944	0.979	0.479	1e-53
Q9Y224	244	UPF0568 protein C14orf166	yes	N/A	0.944	0.979	0.479	1e-53
Q9CQE8	244	UPF0568 protein C14orf166	yes	N/A	0.948	0.983	0.473	3e-53
Q63ZS0	240	UPF0568 protein C14orf166	N/A	N/A	0.932	0.983	0.473	1e-51
Q7ZUH1	242	UPF0568 protein C14orf166	yes	N/A	0.940	0.983	0.461	2e-50
Q553E8	271	UPF0568 protein OS=Dictyo	yes	N/A	0.885	0.826	0.257	7e-15
Q09526	253	Uncharacterized protein E	yes	N/A	0.940	0.940	0.25	1e-09

>sp|Q5R8I2|CN166_PONAB UPF0568 protein C14orf166 homolog OS=Pongo abelii PE=2 SV=1

 Score =  209 bits (532), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 152/246 (61%), Gaps = 7/246 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct: 4   RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVV-STN 126
             DV  P  +     E I+WLLG A RLEY DN ++YK    + V  N  +A     +  
Sbjct: 64  LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYK----DLVPDNSKTADNATKNAE 118

Query: 127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPK 186
           PL NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +
Sbjct: 119 PLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKAN-QTKE 177

Query: 187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
           G P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD 
Sbjct: 178 GLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDH 237

Query: 247 KLGKVG 252
           +LGKVG
Sbjct: 238 RLGKVG 243

Involved in modulation of mRNA transcription by Polymerase II.
Pongo abelii (taxid: 9601)

>sp|Q9Y224|CN166_HUMAN UPF0568 protein C14orf166 OS=Homo sapiens GN=C14orf166 PE=1 SV=1

 Score =  209 bits (532), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/246 (47%), Positives = 152/246 (61%), Gaps = 7/246 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct: 4   RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVV-STN 126
             DV  P  +     E I+WLLG A RLEY DN ++YK    + V  N  +A     +  
Sbjct: 64  LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYK----DLVPDNSKTADNATKNAE 118

Query: 127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPK 186
           PL NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +
Sbjct: 119 PLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKAN-QTKE 177

Query: 187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
           G P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD 
Sbjct: 178 GLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDH 237

Query: 247 KLGKVG 252
           +LGKVG
Sbjct: 238 RLGKVG 243

Involved in modulation of mRNA transcription by Polymerase II. In case of infection by influenza virus A, is involved in viral replication.

Homo sapiens (taxid: 9606)

>sp|Q9CQE8|CN166_MOUSE UPF0568 protein C14orf166 homolog OS=Mus musculus PE=2 SV=1

 Score =  208 bits (530), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/245 (47%), Positives = 152/245 (62%), Gaps = 5/245 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct: 4   RKLTALDYHNPSGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
             DV  P  +     E I+WLLG A RLEY DN ++YK    +   +  ++A    +  P
Sbjct: 64  LKDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYKDLVPDNRKNTDNAAK---NAEP 119

Query: 128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
           L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +G
Sbjct: 120 LINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKAN-QTKEG 178

Query: 188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
            P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct: 179 LPVALEKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 238

Query: 248 LGKVG 252
           LGKVG
Sbjct: 239 LGKVG 243

Involved in modulation of mRNA transcription by Polymerase II.

Mus musculus (taxid: 10090)

>sp|Q63ZS0|CN166_XENLA UPF0568 protein C14orf166 homolog OS=Xenopus laevis PE=2 SV=1

 Score =  202 bits (515), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/245 (47%), Positives = 153/245 (62%), Gaps = 9/245 (3%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL+ L Y +P  FN   E EFRN +VWLEDQKIR YKIE+R  LR + S  W   + +Y
Sbjct: 4   RKLQALDYHNPAGFNFKDETEFRNFLVWLEDQKIRHYKIEERGNLRNIHSSEWPAQYEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
             DV  P  +     E I+WLLG A RLEY DN  +Y  Q A+  +S+ S      S  P
Sbjct: 64  LNDVNCPFKVQERQ-ESIDWLLGLAVRLEYGDNAAKY--QNAKPYNSDVSK-----SAEP 115

Query: 128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
           L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL+++A+A       +G
Sbjct: 116 LINLDVNNPDFKAGVMALANLLQIQRHDDYLMMLKAIRILVQERLSQEAVAKSNSA-KEG 174

Query: 188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
            P    +   GF   D VLN AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct: 175 LPVALDKHILGFDTGDAVLNDAARILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 234

Query: 248 LGKVG 252
           LGKVG
Sbjct: 235 LGKVG 239

Involved in modulation of mRNA transcription by Polymerase II.

Xenopus laevis (taxid: 8355)

>sp|Q7ZUH1|CN166_DANRE UPF0568 protein C14orf166 homolog OS=Danio rerio GN=zgc:56576 PE=2 SV=1

 Score =  198 bits (504), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/245 (46%), Positives = 150/245 (61%), Gaps = 7/245 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL  L Y +P  F+   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct: 4   RKLTALEYHNPTGFDCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIPSSDWPKYFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
             DV  P ++     E ++WLLG A R EY DNV++Y++       +N        S +P
Sbjct: 64  LQDVNCPFSVQERQ-ETVDWLLGLAVRFEYGDNVEKYRN-CKPVTETNDVQK----SADP 117

Query: 128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
           L NL+ ++P+FK GV +LA  LKI+ H ++L  L+A   L+  RL  DA+A       +G
Sbjct: 118 LINLDSNNPDFKAGVLALANLLKIQRHDDYLVMLKAIKILVQERLTPDAIAKASQA-KEG 176

Query: 188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
            P    +   GF   D  LN+AA++L LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct: 177 LPVTLDKHILGFDTGDATLNEAAQVLRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 236

Query: 248 LGKVG 252
           LGKVG
Sbjct: 237 LGKVG 241

Involved in modulation of mRNA transcription by Polymerase II.

Danio rerio (taxid: 7955)

>sp|Q553E8|U568_DICDI UPF0568 protein OS=Dictyostelium discoideum GN=DDB_G0275847 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 67/291 (23%)

Query: 6   IIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFH 65
           +I+KL  L Y + +S N    ++F +++ +L +   ++Y   D +EL  + +  W N F 
Sbjct: 3   LIKKLSILNYPNKDSLNLNEREQFISVISYLLE---KLYNSSDISELLNV-TDEWENQFK 58

Query: 66  QYCTDVGLPITLLS-TPLEQIEWLLGHASRL----EYADNVDQYKSQTAEFVSSNQSSAP 120
            + +   +PI + + T +++ E ++   +      +Y +NV+Q              +  
Sbjct: 59  NFISQKQIPINVDNLTDIKEKEKVVTIFTNFLIKNQYKENVEQI-----------HETKY 107

Query: 121 KVVSTNPLDNLNFDSPEFKKGVNSLAE--KLKIRPHPNHLTTLEACCKLISARLNEDALA 178
           K +    L+N+NFD     + V+SLA+     I+P   H T L +    ++ R   D   
Sbjct: 108 KCLQRYKLENVNFDENNLTEAVHSLAKLFNYDIKPTDVHYTALLSMIVRVAERKFNDV-- 165

Query: 179 HPEFV-------------------------------------IPKGKPFPFLEIDNGFTL 201
            P  +                                     I     FP      GF  
Sbjct: 166 -PSLIKDEEERKKKLETTTTTTTTSTTTNNNNDNLNDNSKNEIVNNNIFPL-----GFDF 219

Query: 202 PDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGKVG 252
            D  +N AA IL LLY+ DLR+LQ KIN+ +  VQ  TANP+T+ KL  VG
Sbjct: 220 KDDKMNSAATILRLLYVSDLRELQNKINQVLSIVQNYTANPETNFKLAVVG 270

Dictyostelium discoideum (taxid: 44689)

>sp|Q09526|YQN5_CAEEL Uncharacterized protein E02H1.5 OS=Caenorhabditis elegans GN=E02H1.5 PE=4 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAE-LRKLESPHWMNSFHQ 66
           RKL+ + Y   +  N   + E R ++V +E+  ++       A+ L + +   W     +
Sbjct: 4   RKLRAVEY-DRDYINFDDDNEIRRLIVTVEEAHLKCRDQNWSAQMLDEQDVAKWTVELEK 62

Query: 67  YCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSN-QSSAPKVV-- 123
           Y T+ G P     +    I+++L  A +  Y     + K    E  SS  +  A KV+  
Sbjct: 63  YFTEFGAPSG--CSRAAAIDYVLNAAVQKIY-----EQKGGDTELCSSRLREQAEKVLEA 115

Query: 124 ---STNPLDNLNFDSPEFKKGVNSLAEKLKIRP-HPNHLTTLEACCKLISARLNEDALA- 178
              S NPL+ L++ SP F +   +L   L I   HP+    ++A C  I+  L +D +A 
Sbjct: 116 HRDSQNPLNRLDYSSPNFAENARALCSILGISAHHPDPKVLMKAACLYIAENLGDDVIAE 175

Query: 179 HPEFVIPKGKPFPFLEIDNGFTLP-DPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQT 237
             E V+   K         G   P +  ++ +A++L L+ +  LR +   INE +V +Q 
Sbjct: 176 ETEEVLKNKKTLNINAFPIGMQAPKNGAVHFSARLLRLICLRQLRVVSRMINETLVEIQN 235

Query: 238 VTANPKTDTKLGKVGF 253
           +T +      L +V +
Sbjct: 236 LTMDMSKRADLKQVQY 251

Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
307095150	245	hypothetical conserved protein [Triatoma	0.952	0.983	0.562	2e-72
156551153	247	PREDICTED: UPF0568 protein C14orf166 hom	0.956	0.979	0.556	1e-70
383852573	249	PREDICTED: UPF0568 protein C14orf166 hom	0.960	0.975	0.542	1e-67
350418375	249	PREDICTED: UPF0568 protein C14orf166 hom	0.960	0.975	0.522	4e-64
427786363	246	Putative riken cdna 2700060e02 protein [	0.956	0.983	0.502	6e-64
380023932	252	PREDICTED: UPF0568 protein C14orf166 hom	0.960	0.964	0.506	8e-64
340726572	249	PREDICTED: UPF0568 protein C14orf166 hom	0.960	0.975	0.518	9e-64
307202994	249	UPF0568 protein C14orf166-like protein [	0.960	0.975	0.506	9e-64
307176766	249	UPF0568 protein C14orf166-like protein [	0.960	0.975	0.510	7e-63
332027096	250	UPF0568 protein C14orf166-like protein [	0.960	0.972	0.487	3e-59

>gi|307095150|gb|ADN29881.1| hypothetical conserved protein [Triatoma matogrossensis]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 139/247 (56%), Positives = 180/247 (72%), Gaps = 6/247 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL+ LGY S ++F+    ++FR +V+WLEDQ IR YKIEDR +LR ++S  W +SF +Y
Sbjct: 4   RKLEALGYHSADTFDINDSRQFRALVLWLEDQVIRHYKIEDRDDLRNIDSKLWDSSFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
           C D+  PI       E +EW++G A +LEY D+  +Y  Q ++ +  ++SSAP V S+NP
Sbjct: 64  CKDLECPIAFTEQK-ECLEWVVGLAVKLEYNDDKQKYSKQVSDVIKESKSSAPVVKSSNP 122

Query: 128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARL-NEDALAHPEFVIPK 186
           LDNL+F S EF+KGVN+LA+ L+I PHPNHL TLEA C LI   L +E+ L   +    +
Sbjct: 123 LDNLDFYSDEFRKGVNALADMLQITPHPNHLITLEAICTLIIQSLASENNLTSSK----E 178

Query: 187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
           GKPFP +E D GF + D +LN+AAK+L LLYIHDLRDLQTKINE IVAVQT+TANPKTDT
Sbjct: 179 GKPFPIMESDLGFDMGDYILNQAAKVLRLLYIHDLRDLQTKINECIVAVQTITANPKTDT 238

Query: 247 KLGKVGF 253
           KLGKVGF
Sbjct: 239 KLGKVGF 245

Source: Triatoma matogrossensis

Species: Triatoma matogrossensis

Genus: Triatoma

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156551153|ref|XP_001604251.1| PREDICTED: UPF0568 protein C14orf166 homolog [Nasonia vitripennis]

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/246 (55%), Positives = 176/246 (71%), Gaps = 4/246 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKLK L Y   + FN    +  + +V WLEDQKIR YKIEDR +L+ + S  W  +F +Y
Sbjct: 4   RKLKALDYFDCDKFNGNDLQHVKKLVPWLEDQKIRQYKIEDRKDLQNINSDQWPATFEKY 63

Query: 68  CTDVG-LPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTN 126
             DVG LP   L   L+++EWL+G A RLE+ DN ++Y++ T+    S   SAP + S+N
Sbjct: 64  LEDVGCLPFQAL---LDKVEWLIGLAIRLEFEDNCEKYRAITSSNAKSKHESAPSIKSSN 120

Query: 127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPK 186
           PLDNL+F S +FK GVN+LA+ L I  HPNHL TLEAC KLI  RLN +A+ +P  VI +
Sbjct: 121 PLDNLDFQSNDFKDGVNALAKLLNIPQHPNHLITLEACSKLICKRLNPNAVQNPNSVIVR 180

Query: 187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
           GKPFP +E + G+ + D  LNKAAK+L+LLYI DLRDLQTKINEAIV+VQ++TANPKTDT
Sbjct: 181 GKPFPIMETEVGYNMGDAALNKAAKVLSLLYIQDLRDLQTKINEAIVSVQSITANPKTDT 240

Query: 247 KLGKVG 252
           KLG+VG
Sbjct: 241 KLGRVG 246

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852573|ref|XP_003701801.1| PREDICTED: UPF0568 protein C14orf166 homolog [Megachile rotundata]

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/247 (54%), Positives = 166/247 (67%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           R+LK LGY   +  N    + FR +V+WLEDQKIR Y IEDR ELR L++  W   F +Y
Sbjct: 4   RRLKALGYVEWDKVNVNDSQHFRKVVIWLEDQKIRQYSIEDRKELRNLKNESWPKVFAKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAE--FVSSNQSSAPKVVST 125
           C DV  P+  L+ PL+Q+EWLLGHA  LE   N ++Y     E       ++  P++ S 
Sbjct: 64  CEDVKCPV--LNKPLDQLEWLLGHAIWLEAEHNTEEYSQNVKEMKLKMKQEAKVPQLRSK 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP 185
           NPLDNL+F S EFK G  SLA+ L+I  HPNHL TL+AC KL+  RLN + L +P   I 
Sbjct: 122 NPLDNLDFYSTEFKTGTYSLAKLLRIPHHPNHLITLKACSKLVQRRLNSECLRNPNSKII 181

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           +GKPFP ++I  GF L  P L  AAKIL LLYI D+R+LQTKINEAIV VQ++TANPKTD
Sbjct: 182 RGKPFPIMDIAAGFQLNKPALENAAKILALLYIQDIRNLQTKINEAIVRVQSITANPKTD 241

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 242 TKLGKVG 248

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418375|ref|XP_003491839.1| PREDICTED: UPF0568 protein C14orf166 homolog [Bombus impatiens]

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 129/247 (52%), Positives = 164/247 (66%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           R+L+ LGY   +  N    + FR + +WLE+QKIR Y I+DR ELR ++S  W  +F +Y
Sbjct: 4   RRLQALGYLEWDKVNINDPQHFRKVTLWLEEQKIRQYSIQDRKELRDIKSESWPKTFAKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSA--PKVVST 125
           C DV  PI+  S  ++Q+EWL+G A  LE  +N +QY     E     +  A  P + ST
Sbjct: 64  CEDVKCPIS--SNNMDQLEWLIGRAIWLEAENNTEQYSINVKEMKLKMKQEALVPHLKST 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP 185
           NPLDNLNF+S EFK GV S+A+ L+I  HPNHL TL+AC KL+  RLN + L +P   I 
Sbjct: 122 NPLDNLNFESNEFKNGVYSVAKLLRIPQHPNHLVTLKACSKLVQRRLNSECLRNPNSKII 181

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           +GKPFP +  D GF L    +  AAKIL LLYI D+R+LQTKINE IV VQ+VTANPKTD
Sbjct: 182 RGKPFPIMNCDPGFQLKKTAVENAAKILALLYIQDIRNLQTKINEVIVRVQSVTANPKTD 241

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 242 TKLGKVG 248

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427786363|gb|JAA58633.1| Putative riken cdna 2700060e02 protein [Rhipicephalus pulchellus]

 Score =  249 bits (637), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 123/245 (50%), Positives = 165/245 (67%), Gaps = 3/245 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKL  LG+ + ++FN   + EFR++V WLEDQKIR YK+E+RA LR L++P WM +F  Y
Sbjct: 4   RKLTALGFNNTDNFNIQSQGEFRSLVAWLEDQKIRHYKLEERAALRALDAPGWMQAFETY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
             D+G P     T    ++WLLG A  LEY+D+ D+Y   + +  +   + APK+V  NP
Sbjct: 64  LRDLGCPHKSSDTKTV-LDWLLGLAVHLEYSDDPDKYVEASKK--AEQDTGAPKMVHANP 120

Query: 128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
           LD+L+FD  EF++GV +LA+ L +  HP+H+ TL+  C LI  RL+       +    +G
Sbjct: 121 LDDLDFDCQEFRQGVQALAQYLGVTQHPDHIVTLQGVCALIQERLSPTGQEAVKQRSTQG 180

Query: 188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
           KP+P  E   GF   DPVLN AAK+L LLY+ DLRDLQT+INEAIVAVQ +TANPKTDT+
Sbjct: 181 KPYPLKESSLGFDTGDPVLNHAAKVLRLLYVQDLRDLQTRINEAIVAVQAITANPKTDTR 240

Query: 248 LGKVG 252
           LGKVG
Sbjct: 241 LGKVG 245

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380023932|ref|XP_003695763.1| PREDICTED: UPF0568 protein C14orf166 homolog [Apis florea]

 Score =  249 bits (636), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 163/247 (65%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           R+L+ LGY   +  N    + FR + +WLEDQKIR Y I+DR ELR ++S  W  +F +Y
Sbjct: 7   RRLQALGYLEWDKVNINDVQHFRKITLWLEDQKIRQYDIQDRKELRDIKSESWSKAFAKY 66

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSA--PKVVST 125
           C DV  P++  +  ++Q+EWL+G+A  LE  +N+++Y     E     +  A  P + S 
Sbjct: 67  CNDVKCPVS--NNTVDQLEWLIGYAIWLEAENNIEEYSQNVKEIKLKMKQKAMVPHLKSK 124

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP 185
           NPLDNLNFDS EFK G  S+A+ L+I  HPNHL TL+AC KL+  RLN + L +P   I 
Sbjct: 125 NPLDNLNFDSNEFKNGTYSVAKLLRIPRHPNHLVTLKACSKLVQRRLNSECLRNPNSKII 184

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           +GKPFP +  D GF L    +  AAKIL LLYI D+R+LQTKINE IV VQ +TANPKTD
Sbjct: 185 RGKPFPVMNCDPGFQLKKTAVENAAKILALLYIQDIRNLQTKINEVIVQVQNITANPKTD 244

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 245 TKLGKVG 251

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726572|ref|XP_003401630.1| PREDICTED: UPF0568 protein C14orf166 homolog [Bombus terrestris]

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 128/247 (51%), Positives = 164/247 (66%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           R+L+ LGY   +  N    + FR + +WLE+QKIR Y I+DR ELR ++S  W  +F +Y
Sbjct: 4   RRLQALGYLEWDKVNINDPQHFRKVTLWLEEQKIRQYSIQDRKELRDIKSESWPKTFAKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSA--PKVVST 125
           C DV  PI+  S  L+Q+EWL+G A  LE  +N +QY     E     +  A  P + ST
Sbjct: 64  CEDVKCPIS--SNNLDQLEWLIGRAIWLEAENNTEQYSKNVKEMKLKMKQEALVPHLKST 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP 185
           NPLDNL+F+S EFK G+ S+A+ L+I  HPNHL TL+AC KL+  RLN + L +P   I 
Sbjct: 122 NPLDNLDFESNEFKNGIYSVAKLLRIPQHPNHLVTLKACSKLVQRRLNSECLRNPNSKII 181

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           +GKPFP +  D GF L    +  AAKIL LLYI D+R+LQTKINE IV VQ+VTANPKTD
Sbjct: 182 RGKPFPIMNCDPGFQLKKTAVENAAKILALLYIQDIRNLQTKINEVIVRVQSVTANPKTD 241

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 242 TKLGKVG 248

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307202994|gb|EFN82210.1| UPF0568 protein C14orf166-like protein [Harpegnathos saltator]

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 125/247 (50%), Positives = 164/247 (66%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKLK LGY   +  N   ++ FR ++VWLEDQKIR Y I+DRA LR + SP W   F +Y
Sbjct: 4   RKLKALGYLEWDKVNGNNDQHFRKVIVWLEDQKIRHYTIDDRAPLRDITSPEWPKVFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKS--QTAEFVSSNQSSAPKVVST 125
           C DV  PIT      +Q+EW +G+A  LE+ D+  +Y+    +   V  NQ++ P V S 
Sbjct: 64  CNDVKCPIT--KNAADQLEWFIGYAIWLEFGDDCQKYQGVLGSKAKVIDNQANVPNVKSI 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP 185
           NPLDNL+FDS  FK GV ++A+ L++  H +HL TL+AC KL+  +LN +A+  P  V  
Sbjct: 122 NPLDNLDFDSNAFKVGVGTIAKLLRVPQHSDHLVTLQACSKLVCNKLNAEAVKQPNIVNI 181

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           KGK    + I  GF + D +L+ AA+ L+LLYI DLR+LQTKINE IVAVQ +TANPKTD
Sbjct: 182 KGKSLTAMTIGPGFNMGDKMLDNAARGLSLLYIQDLRNLQTKINETIVAVQNITANPKTD 241

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 242 TKLGKVG 248

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307176766|gb|EFN66166.1| UPF0568 protein C14orf166-like protein [Camponotus floridanus]

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 126/247 (51%), Positives = 161/247 (65%), Gaps = 4/247 (1%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKLK LGY   +  N    + FR +++WLEDQKIR YKIEDR +LR + SP W N F +Y
Sbjct: 4   RKLKALGYMEWDKVNGNNTQHFRKVILWLEDQKIRHYKIEDRKQLRNITSPEWPNVFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVS-SNQSSAPKVVSTN 126
           C DV  PIT       Q+EW +G+A  LE+ D+  +Y+          N+   P + STN
Sbjct: 64  CNDVKCPIT--KNEAGQLEWFIGYAIWLEFGDDCKKYQQIVGSKAKVKNEVKIPNIKSTN 121

Query: 127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIP- 185
           PLDNL+FD+  F  GVNS+A+ LK+  H +HL TL+AC KL+  +LN DA+     V+  
Sbjct: 122 PLDNLDFDNDAFTTGVNSIAKLLKVPKHSDHLVTLQACSKLVCNKLNADAIKQSNNVVSV 181

Query: 186 KGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTD 245
           KGKP   + I   F + D +L+ AAK L+LLYI DLR+LQTKINE IVAVQ +TANPKTD
Sbjct: 182 KGKPLTAMTIVPSFNMGDIMLDNAAKGLSLLYIQDLRNLQTKINETIVAVQNITANPKTD 241

Query: 246 TKLGKVG 252
           TKLGKVG
Sbjct: 242 TKLGKVG 248

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027096|gb|EGI67192.1| UPF0568 protein C14orf166-like protein [Acromyrmex echinatior]

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/248 (48%), Positives = 155/248 (62%), Gaps = 5/248 (2%)

Query: 8   RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
           RKLK LGY   +  N    + FR ++VWLEDQKIR Y IEDR +LR + S  W  +F +Y
Sbjct: 4   RKLKALGYLEWDKVNGNNTQHFRKVIVWLEDQKIRHYTIEDRQKLRDITSSEWPKTFEKY 63

Query: 68  CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSS--NQSSAPKVVST 125
           C DV  PIT     ++Q+EW +G+A  LE+ D+  +Y+            +   P + ST
Sbjct: 64  CNDVDCPIT--KNEIDQLEWFIGYAIWLEFGDDCQKYQQVIGSKAKDVKKEMKVPSIKST 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHP-EFVI 184
           NPLDNL+FDS  FKKG+NS+A+ L +  H +HL TL+AC KL+  +LN DA+        
Sbjct: 122 NPLDNLDFDSDAFKKGINSIAKLLNVPKHSDHLITLQACSKLVCNKLNTDAIKQSNSAAY 181

Query: 185 PKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKT 244
            K K      I   F + D +L+ AAK L LLYI DLR+LQTKINE IVAVQ +TANPKT
Sbjct: 182 AKNKSLTKTIIGPSFNMGDGMLDNAAKGLALLYIQDLRNLQTKINETIVAVQNITANPKT 241

Query: 245 DTKLGKVG 252
           DTKLGKVG
Sbjct: 242 DTKLGKVG 249

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
UNIPROTKB|F1NEI4	244	C5H14orf166 "Uncharacterized p	0.948	0.983	0.477	4.4e-52
UNIPROTKB|Q3T0S7	245	C10H14ORF166 "Uncharacterized	0.952	0.983	0.477	6.5e-51
UNIPROTKB|Q9Y224	244	C14orf166 "UPF0568 protein C14	0.944	0.979	0.479	1.1e-50
UNIPROTKB|F1SFF4	244	C14orf166 "Uncharacterized pro	0.948	0.983	0.481	1.1e-50
UNIPROTKB|Q5R8I2	244	Q5R8I2 "UPF0568 protein C14orf	0.944	0.979	0.479	1.1e-50
MGI|MGI:1915295	244	2700060E02Rik "RIKEN cDNA 2700	0.948	0.983	0.481	1.1e-50
UNIPROTKB|Q63ZS0	240	Q63ZS0 "UPF0568 protein C14orf	0.932	0.983	0.473	2.3e-48
ZFIN|ZDB-GENE-040426-1082	242	zgc:56576 "zgc:56576" [Danio r	0.940	0.983	0.461	4.7e-48
RGD|1304704	296	RGD1304704 "similar to Hypothe	0.889	0.760	0.462	8.6e-47
FB|FBgn0051249	250	CG31249 [Drosophila melanogast	0.940	0.952	0.438	9.1e-45

UNIPROTKB|F1NEI4 C5H14orf166 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 117/245 (47%), Positives = 154/245 (62%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W  SF +Y
Sbjct:     4 RKLSALDYHNPGGFNCRDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSDDWPKSFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P  +     E ++WLLG A RLEY DN D+YK  T +   +  ++A    +  P
Sbjct:    64 MKDVNCPFKMQERQ-ETVDWLLGLAVRLEYGDNADKYKDSTPDGAKNTDNTAK---NAEP 119

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +G
Sbjct:   120 LINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAIAKAN-QSKEG 178

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D V+N+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   179 LPVALEKHILGFDTGDAVINEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 238

Query:   248 LGKVG 252
             LGKVG
Sbjct:   239 LGKVG 243

GO:0000993 "RNA polymerase II core binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0072669 "tRNA-splicing ligase complex" evidence=IEA

UNIPROTKB|Q3T0S7 C10H14ORF166 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 117/245 (47%), Positives = 152/245 (62%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P  +     E I+WLLG A RLEY DN ++Y        + N  +A K  +  P
Sbjct:    64 LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYNKDLVPDNTKNADNAAK--NAEP 120

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A     + +G
Sbjct:   121 LINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKAN-QMKEG 179

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   180 LPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 239

Query:   248 LGKVG 252
             LGKVG
Sbjct:   240 LGKVG 244

GO:0072669 "tRNA-splicing ligase complex" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000993 "RNA polymerase II core binding" evidence=IEA

UNIPROTKB|Q9Y224 C14orf166 "UPF0568 protein C14orf166" [Homo sapiens (taxid:9606)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 118/246 (47%), Positives = 152/246 (61%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVV-STN 126
               DV  P  +     E I+WLLG A RLEY DN ++YK    + V  N  +A     +  
Sbjct:    64 LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYK----DLVPDNSKTADNATKNAE 118

Query:   127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPK 186
             PL NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +
Sbjct:   119 PLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQT-KE 177

Query:   187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
             G P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD 
Sbjct:   178 GLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDH 237

Query:   247 KLGKVG 252
             +LGKVG
Sbjct:   238 RLGKVG 243

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0072669 "tRNA-splicing ligase complex" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0000993 "RNA polymerase II core binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1SFF4 C14orf166 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 118/245 (48%), Positives = 153/245 (62%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P  +     E I+WLLG A RLEY DN ++YK    +  + N  +A K  +  P
Sbjct:    64 LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYKDLVPDN-TKNADNAAK--NAEP 119

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +G
Sbjct:   120 LINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQT-KEG 178

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   179 LPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 238

Query:   248 LGKVG 252
             LGKVG
Sbjct:   239 LGKVG 243

GO:0072669 "tRNA-splicing ligase complex" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0042802 "identical protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000993 "RNA polymerase II core binding" evidence=IEA

UNIPROTKB|Q5R8I2 Q5R8I2 "UPF0568 protein C14orf166 homolog" [Pongo abelii (taxid:9601)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 118/246 (47%), Positives = 152/246 (61%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVV-STN 126
               DV  P  +     E I+WLLG A RLEY DN ++YK    + V  N  +A     +  
Sbjct:    64 LRDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYK----DLVPDNSKTADNATKNAE 118

Query:   127 PLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPK 186
             PL NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +
Sbjct:   119 PLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQT-KE 177

Query:   187 GKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDT 246
             G P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD 
Sbjct:   178 GLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDH 237

Query:   247 KLGKVG 252
             +LGKVG
Sbjct:   238 RLGKVG 243

GO:0000993 "RNA polymerase II core binding" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0072669 "tRNA-splicing ligase complex" evidence=ISS

MGI|MGI:1915295 2700060E02Rik "RIKEN cDNA 2700060E02 gene" [Mus musculus (taxid:10090)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 118/245 (48%), Positives = 152/245 (62%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  FN   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALDYHNPSGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P  +     E I+WLLG A RLEY DN ++YK    +    N  +A K  +  P
Sbjct:    64 LKDVNCPFKIQDRQ-EAIDWLLGLAVRLEYGDNAEKYKDLVPDN-RKNTDNAAK--NAEP 119

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A       +G
Sbjct:   120 LINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQT-KEG 178

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   179 LPVALEKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 238

Query:   248 LGKVG 252
             LGKVG
Sbjct:   239 LGKVG 243

GO:0000993 "RNA polymerase II core binding" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0072669 "tRNA-splicing ligase complex" evidence=ISO

UNIPROTKB|Q63ZS0 Q63ZS0 "UPF0568 protein C14orf166 homolog" [Xenopus laevis (taxid:8355)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 116/245 (47%), Positives = 153/245 (62%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL+ L Y +P  FN   E EFRN +VWLEDQKIR YKIE+R  LR + S  W   + +Y
Sbjct:     4 RKLQALDYHNPAGFNFKDETEFRNFLVWLEDQKIRHYKIEERGNLRNIHSSEWPAQYEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P  +     E I+WLLG A RLEY DN  +Y  Q A+  +S+ S      S  P
Sbjct:    64 LNDVNCPFKVQERQ-ESIDWLLGLAVRLEYGDNAAKY--QNAKPYNSDVSK-----SAEP 115

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL+++A+A       +G
Sbjct:   116 LINLDVNNPDFKAGVMALANLLQIQRHDDYLMMLKAIRILVQERLSQEAVAKSNSA-KEG 174

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D VLN AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   175 LPVALDKHILGFDTGDAVLNDAARILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 234

Query:   248 LGKVG 252
             LGKVG
Sbjct:   235 LGKVG 239

GO:0000993 "RNA polymerase II core binding" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0072669 "tRNA-splicing ligase complex" evidence=ISS

ZFIN|ZDB-GENE-040426-1082 zgc:56576 "zgc:56576" [Danio rerio (taxid:7955)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 113/245 (46%), Positives = 150/245 (61%)

Query:     8 RKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQY 67
             RKL  L Y +P  F+   E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y
Sbjct:     4 RKLTALEYHNPTGFDCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIPSSDWPKYFEKY 63

Query:    68 CTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNP 127
               DV  P ++     E ++WLLG A R EY DNV++Y++       +N        S +P
Sbjct:    64 LQDVNCPFSVQERQ-ETVDWLLGLAVRFEYGDNVEKYRN-CKPVTETNDVQK----SADP 117

Query:   128 LDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKG 187
             L NL+ ++P+FK GV +LA  LKI+ H ++L  L+A   L+  RL  DA+A       +G
Sbjct:   118 LINLDSNNPDFKAGVLALANLLKIQRHDDYLVMLKAIKILVQERLTPDAIAKASQA-KEG 176

Query:   188 KPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTK 247
              P    +   GF   D  LN+AA++L LL+I +LR+LQTKINEAIVAVQ + A+PKTD +
Sbjct:   177 LPVTLDKHILGFDTGDATLNEAAQVLRLLHIEELRELQTKINEAIVAVQAIIADPKTDHR 236

Query:   248 LGKVG 252
             LGKVG
Sbjct:   237 LGKVG 241

GO:0000993 "RNA polymerase II core binding" evidence=ISS

GO:0072669 "tRNA-splicing ligase complex" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

RGD|1304704 RGD1304704 "similar to Hypothetical protein CGI-99" [Rattus norvegicus (taxid:10116)]

 Score = 467 (169.5 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
 Identities = 112/242 (46%), Positives = 147/242 (60%)

Query:    26 EKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQI 85
             E EFRN +VWLEDQKIR YKIEDR  LR + S  W   F +Y  DV  P  +     E I
Sbjct:    56 ETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLRDVNCPFKIQDRQ-EAI 114

Query:    86 EWLLGHASRLEYADN-VDQYK-SQTAEF------------VSSNQSSAPKVV-STNPLDN 130
             +WLLG A RLEY DN +D    S+  EF            V  N+ +A     ++ PL N
Sbjct:   115 DWLLGLAVRLEYGDNAIDVLLLSEAFEFGARGKAEKYKDSVPDNRKNADNAAKNSEPLIN 174

Query:   131 LNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEFVIPKGKPF 190
             L+ ++P+FK GV +LA  L+I+ H ++L  L+A   L+  RL +DA+A     + +G P 
Sbjct:   175 LDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKAN-QMKEGLPV 233

Query:   191 PFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKTDTKLGK 250
                +   GF   D VLN+AA+IL LL+I +LR+LQTKINEAIVAVQ + A+PKTD +LGK
Sbjct:   234 ALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHRLGK 293

Query:   251 VG 252
             VG
Sbjct:   294 VG 295

GO:0000993 "RNA polymerase II core binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0042802 "identical protein binding" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0072669 "tRNA-splicing ligase complex" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

FB|FBgn0051249 CG31249 [Drosophila melanogaster (taxid:7227)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 110/251 (43%), Positives = 148/251 (58%)

Query:     9 KLKTLGYASPESFNPI---REKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPH-WMNSF 64
             KL+ LG   P+   P+     KEF N V+WLEDQKIR+Y IEDR +LR +++P  W   +
Sbjct:     7 KLEVLG--RPDVDIPVVMSDRKEFANTVLWLEDQKIRLYSIEDRCKLRTVDNPEIWKEGY 64

Query:    65 HQYCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFV--SSNQSSAPKV 122
              +YC D+ +P   L T  EQ+ W++ +A RL++ D+ DQ+ S   + V   SN   + + 
Sbjct:    65 LKYCADLSMPP--LETRQEQLAWIVSYAVRLDFLDDPDQFASINTKQVPPQSNGKQSQQR 122

Query:   123 VSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALAHPEF 182
             V      N+N     F  GV  LA KL +  HPNHL  LEA  +++  RL+  A      
Sbjct:   123 VQAIFDGNINTQEKAFVDGVRLLASKLNVPHHPNHLLQLEAIARVVHERLSPAAKDRKPV 182

Query:   183 VIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANP 242
             V   GKPFPF + ++  +  D  L+   +IL LL I  LR+LQT INE IVAVQ +TANP
Sbjct:   183 V---GKPFPFDKGNDVVSSNDSALDLPMRILRLLQIQSLRELQTHINETIVAVQNITANP 239

Query:   243 KTDTKLGKVGF 253
             KTDTKLGKVGF
Sbjct:   240 KTDTKLGKVGF 250

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q553E8	U568_DICDI	No assigned EC number	0.2577	0.8853	0.8265	yes	N/A
Q9Y224	CN166_HUMAN	No assigned EC number	0.4796	0.9446	0.9795	yes	N/A
Q09526	YQN5_CAEEL	No assigned EC number	0.25	0.9407	0.9407	yes	N/A
Q7ZUH1	CN166_DANRE	No assigned EC number	0.4612	0.9407	0.9834	yes	N/A
Q5R8I2	CN166_PONAB	No assigned EC number	0.4796	0.9446	0.9795	yes	N/A
Q9CQE8	CN166_MOUSE	No assigned EC number	0.4734	0.9486	0.9836	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	253
pfam10036	245	pfam10036, RLL, Putative carnitine deficiency-asso	4e-80

>gnl|CDD|220534 pfam10036, RLL, Putative carnitine deficiency-associated protein

 Score =  240 bits (615), Expect = 4e-80
 Identities = 119/251 (47%), Positives = 154/251 (61%), Gaps = 12/251 (4%)

Query: 7   IRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQ 66
            RKL  LGY +P+  N    KEFR++++WLEDQKIR+YKIEDR +LR ++S  W  +  +
Sbjct: 3   RRKLAALGYPNPDLLNIDDPKEFRSLILWLEDQKIRLYKIEDREKLRNVDSADWTEALEK 62

Query: 67  YCTDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSA-PKVVST 125
           Y  D+ +PI L  T  EQ++WLL  A RLEY DN     S   +           +  S 
Sbjct: 63  YLKDLEIPIDL-KTRQEQLDWLLSLAIRLEYKDNTQYDLSGARDLPEEESKRTKLQDDSA 121

Query: 126 NPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEACCKLISARLNEDALA---HPEF 182
           N    L+F SPEF++GV +LA+ L I  HP+HL  L A CK+I  RL+ +A A       
Sbjct: 122 NDN--LDFTSPEFEEGVRALAKLLGIAHHPDHLVLLLAACKVIQERLSTEAKAENPIEGK 179

Query: 183 VIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANP 242
             P+ K FP      GF + D  LN+AA+IL LL+I  LR+LQTKINE +VAVQ +TANP
Sbjct: 180 PFPEDKLFPL-----GFDVGDAELNEAARILRLLHIEQLRELQTKINETLVAVQNLTANP 234

Query: 243 KTDTKLGKVGF 253
           KTDTKLGKVG 
Sbjct: 235 KTDTKLGKVGR 245

This family of proteins conserved from nematodes to humans is of approximately 250 amino acids. It is purported to be carnitine deficiency-associated protein but this could not be confirmed. It carries a characteristic RLL sequence-motif. The function is unknown. Length = 245

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
PF10036	249	RLL: Putative carnitine deficiency-associated prot	100.0
KOG4380|consensus	244		100.0
PF10239	318	DUF2465: Protein of unknown function (DUF2465); In	96.67
KOG3973|consensus	465		91.89
PF03801	157	Ndc80_HEC: HEC/Ndc80p family; InterPro: IPR005550	80.78

>PF10036 RLL: Putative carnitine deficiency-associated protein; InterPro: IPR019265 This family of proteins conserved from nematodes to humans is of approximately 250 amino acids

Probab=100.00  E-value=1.3e-95  Score=657.21  Aligned_cols=245  Identities=55%  Similarity=0.882  Sum_probs=226.2

Q ss_pred             hHHHHHhhhCCCCCCCCCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCccHHHHHHHHHhhcCCCCCCCCChHHH
Q psy146            5 NIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQ   84 (253)
Q Consensus         5 m~~rkL~aL~Y~~~~~~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~~W~~~~~kYl~dl~cP~~~~~~~~~~   84 (253)
                      ||+|||+|||||++++||++|++|||+||+|||||||||||||+|++||+++|++|+++|+|||+|++||++..+ ++++
T Consensus         1 m~~rkL~aL~Yp~~~~~n~~d~~~fr~lVvWLEDqKIR~Y~iedR~~LR~i~s~~W~~~~~kYl~dl~cP~~~~~-~~~~   79 (249)
T PF10036_consen    1 MFRRKLKALGYPKPDSFNIDDEEEFRSLVVWLEDQKIRHYKIEDREKLRNIDSSDWPKAFEKYLKDLGCPFSSES-RQEQ   79 (249)
T ss_pred             CcHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhhhhhccCCHhhHHHHhcCCcchHHHHHHHHHHhcCCCCcchh-HHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998888 9999


Q ss_pred             HHHHHHHHHHHHHhhchHHhhhhhHHhh---hhcCCCCCCccCCCCCCCCCCCChHHHHHHHHHHHHhCCCCCCChhHHH
Q psy146           85 IEWLLGHASRLEYADNVDQYKSQTAEFV---SSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTL  161 (253)
Q Consensus        85 ldWLl~~AV~leY~D~~~~y~~~~~~~~---~~~~~~~~~~~~~~~l~~ld~~s~~f~~gv~~La~~L~I~~hpD~lv~L  161 (253)
                      ||||||+||++||+|++  |....+...   .+.+...+..++++|++++||+|++|++||++||++||||+||||+|+|
T Consensus        80 ldWLL~~AV~leY~Dn~--~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~ld~~s~~f~~gv~~La~lL~i~~h~d~~v~l  157 (249)
T PF10036_consen   80 LDWLLGLAVRLEYKDNA--YDDDSSYKSAKEEQNKETSPQCKSTNPLDNLDFNSPEFKAGVRALASLLQIPRHPDHLVTL  157 (249)
T ss_pred             HHHHHHHHHHHHHhccc--cccccccccchhhhcccccccccccCcccccCCCCHHHHHHHHHHHHHhCCCCCchHHHHH
Confidence            99999999999999999  222222211   1122356677899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcChhhhcCCCcCCCCCCCCCccc-CCCCCCCCchhHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhhc
Q psy146          162 EACCKLISARLNEDALAHPEFVIPKGKPFPFLE-IDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTA  240 (253)
Q Consensus       162 ~A~~~~i~~~l~~~a~~~~~~~~~~g~~~~l~~-~~lGf~~~D~~l~~aa~iLRLL~I~~LR~LQt~INe~IVaVQ~lTA  240 (253)
                      +|||++|+++|++++++++..+. .|.|+.... |++||++||++|++||+|||||||++||+|||+|||+||+||+|||
T Consensus       158 ~a~~~~i~~~l~~~~~~~~~~~~-~~~~~~~~~~~~lG~~~~d~~~~~aa~iLRlL~i~~LR~lQt~Ine~iv~vQ~~Ta  236 (249)
T PF10036_consen  158 KAACKLIKEKLSPEAISEANIEQ-SGKPFLDDKLFPLGFDVKDPALNEAARILRLLHIEDLRELQTKINETIVAVQNLTA  236 (249)
T ss_pred             HHHHHHHHHHhchhhhccccccc-cCCcccccccCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999877665 488888666 9999999999999999999999999999999999999999999999


Q ss_pred             CCccccccccCCC
Q psy146          241 NPKTDTKLGKVGF  253 (253)
Q Consensus       241 dPkTD~kLGKVGr  253 (253)
                      |||||+|||||||
T Consensus       237 dPktD~~LGkVGr  249 (249)
T PF10036_consen  237 DPKTDTKLGKVGR  249 (249)
T ss_pred             CCcccccccccCC
Confidence            9999999999998

It is purported to be carnitine deficiency-associated protein but this could not be confirmed. It carries a characteristic RLL sequence-motif. The function is unknown.

>KOG4380|consensus

Probab=100.00  E-value=4.5e-86  Score=568.05  Aligned_cols=244  Identities=47%  Similarity=0.730  Sum_probs=235.4

Q ss_pred             hHHHHHhhhCCCCCCCCCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCccHHHHHHHHHhhcCCCCCCCCChHHH
Q psy146            5 NIIRKLKTLGYASPESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLEQ   84 (253)
Q Consensus         5 m~~rkL~aL~Y~~~~~~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~~W~~~~~kYl~dl~cP~~~~~~~~~~   84 (253)
                      ||||||+||+|++|-.|++.|+.|||++||||||||||||+++||+.|+++.|++|+..|+||+.|+||||+..+ |+++
T Consensus         1 M~RRKL~A~~Y~~~~~~~~~D~~E~R~~IV~~E~~~ir~~~~~~~~~m~~~~~s~W~~~~EKY~~~~~~P~~~~~-R~~A   79 (244)
T KOG4380|consen    1 MFRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLRDVNCPFKIQD-RQEA   79 (244)
T ss_pred             CcccccchhcccCcccccCcchHHHHHHheehhhhhhhhhchhhhhhhcccccccchHHHHHHHHHcCCCccccc-HHHH
Confidence            899999999999999999999999999999999999999999999999999999999999999999999999988 9999


Q ss_pred             HHHHHHHHHHHHHhhchHHhhhhhHHhhhhcCCCCCCccCCCCCCCCCCCChHHHHHHHHHHHHhCCCCCCChhHHHHHH
Q psy146           85 IEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHLTTLEAC  164 (253)
Q Consensus        85 ldWLl~~AV~leY~D~~~~y~~~~~~~~~~~~~~~~~~~~~~~l~~ld~~s~~f~~gv~~La~~L~I~~hpD~lv~L~A~  164 (253)
                      +|||||.||+++|+|++++|+.+.++..+   ..++..++++||++||++||+|++|+++||++|||++||||+|||+|+
T Consensus        80 ID~~L~~AV~~~Y~~~~~~~~~~~~~~~K---~~~~~~~~~~PL~~LD~~~P~F~~~~~AL~~iL~I~~H~D~~VmmKA~  156 (244)
T KOG4380|consen   80 IDWLLGLAVRLEYGDNAEKYKDLVPDNSK---TADNATKNAEPLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAI  156 (244)
T ss_pred             HHHHHHHHHHHHHHhcccchhhhhhhhHH---HHHhhhcccCchhhcCCCCccHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence            99999999999999999999988666433   377889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcChhhhcCCCcCCCCCCCCCcccCCCCCCCCchhHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhhcCCcc
Q psy146          165 CKLISARLNEDALAHPEFVIPKGKPFPFLEIDNGFTLPDPVLNKAAKILNLLYIHDLRDLQTKINEAIVAVQTVTANPKT  244 (253)
Q Consensus       165 ~~~i~~~l~~~a~~~~~~~~~~g~~~~l~~~~lGf~~~D~~l~~aa~iLRLL~I~~LR~LQt~INe~IVaVQ~lTAdPkT  244 (253)
                      |.+|+++|..+++++++++++ |.|..++.+.+||++||+++++||+|||||||++||++||+|||+||+||+|||||||
T Consensus       157 ~i~i~E~L~~D~iA~~~~~~~-~~~~~L~~~I~~~~~~~~~~~~sA~iLRLi~i~~LR~~~~~INE~iV~iQ~i~~D~r~  235 (244)
T KOG4380|consen  157 RILVQERLTQDAVAKANQTKE-GLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKT  235 (244)
T ss_pred             HHHHHHHhhhHHHHHhHHHHh-cCcceecccccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence            999999999999999888885 9999999988889999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCC
Q psy146          245 DTKLGKVGF  253 (253)
Q Consensus       245 D~kLGKVGr  253 (253)
                      |+|+|||||
T Consensus       236 D~r~~~~GR  244 (244)
T KOG4380|consen  236 DHRLGKVGR  244 (244)
T ss_pred             hhhhhccCC
Confidence            999999998

>PF10239 DUF2465: Protein of unknown function (DUF2465); InterPro: IPR018797 FAM98A, B and C are glycine-rich proteins found from worms to humans whose function is unknown

Probab=96.67  E-value=0.026  Score=53.27  Aligned_cols=136  Identities=20%  Similarity=0.363  Sum_probs=84.9

Q ss_pred             HhhhCCCCCCC----------CCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCc-cHHHHHHHHHhhcCCCCCCC
Q psy146           10 LKTLGYASPES----------FNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESP-HWMNSFHQYCTDVGLPITLL   78 (253)
Q Consensus        10 L~aL~Y~~~~~----------~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~-~W~~~~~kYl~dl~cP~~~~   78 (253)
                      |.+|||..|--          --+++. +|+.||.||=.+---+|++++.  ....+.. .+--.+..+|++++||...-
T Consensus         5 L~~lgY~gpl~~e~~l~~a~~~G~~s~-~f~~L~~wL~~EL~~l~~leE~--v~~~dd~~~f~~Els~~L~El~CPy~~L   81 (318)
T PF10239_consen    5 LEDLGYKGPLLEEQALSKALEAGASSP-EFRELCAWLASELKTLCKLEES--VSSPDDAESFLLELSGFLKELGCPYSAL   81 (318)
T ss_pred             HHHcCCCCCCcCHHHHHHHHHcCCCCh-HHHHHHHHHHHHHHHHhccccc--cCCCchHHHHHHHHHHHHHhcCCCcHHH
Confidence            78999966510          123344 8999999999998889999765  3333332 27778899999999997521


Q ss_pred             C------------ChHHHHHHHHHH--HHHHHHhhchHHhhhhhHHhhhhcCCCCCCccCCCCCCCCCCCChHHHHHHHH
Q psy146           79 S------------TPLEQIEWLLGH--ASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNS  144 (253)
Q Consensus        79 ~------------~~~~~ldWLl~~--AV~leY~D~~~~y~~~~~~~~~~~~~~~~~~~~~~~l~~ld~~s~~f~~gv~~  144 (253)
                      .            ++...++||++.  |.++.-......                +...    -   +- ..+....+..
T Consensus        82 ~~G~~~~rl~~~~~~l~LL~fL~sELqaarl~~~k~~~~----------------~~~~----~---~~-~s~~~~~l~~  137 (318)
T PF10239_consen   82 TSGDISDRLQSKEDRLLLLEFLCSELQAARLLAKKKPEE----------------PEQE----E---EK-ESEVAQELKA  137 (318)
T ss_pred             cCCcchhhhcCHHHHHHHHHHHHHHHHHHHHHHhccCCc----------------cccc----c---cc-ccHHHHHHHH
Confidence            1            145567777764  222222211110                0000    0   00 3455568999


Q ss_pred             HHHHhCCCCCCC---hhHHHHHHHHHHHHhc
Q psy146          145 LAEKLKIRPHPN---HLTTLEACCKLISARL  172 (253)
Q Consensus       145 La~~L~I~~hpD---~lv~L~A~~~~i~~~l  172 (253)
                      ++..||++.+|.   ...+|..+..-|.+.|
T Consensus       138 i~~~L~l~~p~~~i~~~~lf~~i~~ki~~~L  168 (318)
T PF10239_consen  138 ICQALGLPKPPPNITASQLFSKIEAKIEELL  168 (318)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999998853   3446777766665555

>KOG3973|consensus

Probab=91.89  E-value=13  Score=36.10  Aligned_cols=153  Identities=18%  Similarity=0.289  Sum_probs=80.8

Q ss_pred             HHhhhCCCCCCC----------CCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCc---cHHHHHHHHHhhcCCCC
Q psy146            9 KLKTLGYASPES----------FNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESP---HWMNSFHQYCTDVGLPI   75 (253)
Q Consensus         9 kL~aL~Y~~~~~----------~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~---~W~~~~~kYl~dl~cP~   75 (253)
                      -|+||+|..+.-          -.+..+ +|.++|+||-.+-=-+|++|++  .|.....   ++-=.+.-+|-+|+||.
T Consensus        11 slk~l~~qg~~~k~~~lsral~ag~~sp-df~~~i~wl~~Elr~L~k~eE~--V~q~~~~~~~eF~~elS~lL~El~CPy   87 (465)
T KOG3973|consen   11 SLKALSFQGHCQKQENLSRALMAGGISP-DFANQIIWLCAELRELYKIEEY--VRQPNDHNLLEFLYELSTLLLELECPY   87 (465)
T ss_pred             HHHHhccCCcccchhhHHHHHHcCCCCh-hHHHHHHHHHHHHHHHHHHHHH--hcCCChhhHHHHHHHHHHHHHHcCCch
Confidence            478999976521          123344 8999999999998889999987  4443212   24444557899999998


Q ss_pred             CCCCChHHHH-HHHHHHH--HHHHHhhchHHhhhhhHHhhhhcCCCCCCccCCCCCCCCCCCChHHHHHHHHHHHHhCCC
Q psy146           76 TLLSTPLEQI-EWLLGHA--SRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKGVNSLAEKLKIR  152 (253)
Q Consensus        76 ~~~~~~~~~l-dWLl~~A--V~leY~D~~~~y~~~~~~~~~~~~~~~~~~~~~~~l~~ld~~s~~f~~gv~~La~~L~I~  152 (253)
                      ..-. .-.+- -++...|  ..++|.|.-=+   -+..-+++..+.++...  .   .   -+-++-.-|..+|..||.+
T Consensus        88 ~eLt-~Gdi~~Rf~s~~a~~lLlsyL~SEl~---tarmi~~~~p~~p~~~~--e---k---~d~ev~q~i~~~~~~L~~~  155 (465)
T KOG3973|consen   88 EELT-CGDIRTRFQSSSAKKLLLSYLDSELK---TARMITRQRPESPEIVS--E---K---RDLEVTQLIDSALRTLNFP  155 (465)
T ss_pred             Hhhc-cccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHcCCCCCcccc--c---c---CCchHHHHHHHHHHHcCCC
Confidence            5422 10010 1122222  33456543211   11222222111111110  0   1   1234556688899999999


Q ss_pred             CCCChhHHHHHHHHHHHHhcChhhhc
Q psy146          153 PHPNHLTTLEACCKLISARLNEDALA  178 (253)
Q Consensus       153 ~hpD~lv~L~A~~~~i~~~l~~~a~~  178 (253)
                      .-|--.-+.+-. --|..|| ..+|+
T Consensus       156 k~p~Nin~~~lf-e~i~~kl-~~ai~  179 (465)
T KOG3973|consen  156 KQPGNINEWKLF-ETIRQKL-DGAIK  179 (465)
T ss_pred             CCCCCchHHHHH-HHHHHHH-HhHHh
Confidence            887543222222 2344443 34554

>PF03801 Ndc80_HEC: HEC/Ndc80p family; InterPro: IPR005550 Members of this family are components of the mitotic spindle

Probab=80.78  E-value=8.5  Score=32.65  Aligned_cols=81  Identities=19%  Similarity=0.313  Sum_probs=50.3

Q ss_pred             HHHhhhCC-CCC---CCCCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCccHHHHHHHHHhhcCCCC-CCCC---
Q psy146            8 RKLKTLGY-ASP---ESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPI-TLLS---   79 (253)
Q Consensus         8 rkL~aL~Y-~~~---~~~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~~W~~~~~kYl~dl~cP~-~~~~---   79 (253)
                      .-|..-|| +.+   ..+.----++|.+++.||-.+-.-.|+.          ...+++.+-..++.||||+ ....   
T Consensus        47 ~fL~~~~~~~~~is~k~l~~Pt~kdf~~I~~fL~~~idp~~~~----------~~k~eeev~~~lK~L~YP~~~isKS~L  116 (157)
T PF03801_consen   47 EFLSEHGFESHPISPKTLKSPTQKDFVEIFNFLFRQIDPNFKF----------GKKFEEEVPFLLKALGYPFATISKSSL  116 (157)
T ss_dssp             HHHHHTT--SS---TTTTSS--HHHHHHHHHHHHHTTSTT-------------SSTHHHHHHHHHHHTT-SS----HHHH
T ss_pred             HHHHHcCCCCccccccccCCCCHHHHHHHHHHHHHHhCCCCCc----------CcCHHHHHHHHHHHhCCCccccCHHHc
Confidence            35667788 432   2222234579999999998884445555          2478999999999999999 5421   


Q ss_pred             ----------ChHHHHHHHHHHHHHHHHh
Q psy146           80 ----------TPLEQIEWLLGHASRLEYA   98 (253)
Q Consensus        80 ----------~~~~~ldWLl~~AV~leY~   98 (253)
                                .-..+|.||..++.-.+=.
T Consensus       117 ~a~gs~hsWP~lL~~L~WLv~l~~~~~~~  145 (157)
T PF03801_consen  117 QAPGSPHSWPHLLGALHWLVELIKYEEEL  145 (157)
T ss_dssp             HSTTSTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence                      1567899999887654433

It has been shown that Ndc80 from yeast is part of a complex called the Ndc80p complex []. This complex is thought to bind to the microtubules of the spindle.; PDB: 3IZ0_E 2VE7_B 2IGP_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	253
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 2e-05
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 68/253 (26%)

Query: 29  FRNMV-VWLED--QKIRIYKIED--RAELRKLESPHWMNSFHQYCTDVGLPITLLSTPLE 83
           +++++ V+ +          ++D  ++ L K E  H + S       + L  TLLS   E
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE 77

Query: 84  QIEWLLGHASRLEYADNVDQYKSQTAEFVSSNQSSAPKVVSTNPLDNLNFDSPEFKKG-- 141
            ++  +    R+ Y   +   K++        Q S    +     D L  D+  F K   
Sbjct: 78  MVQKFVEEVLRINYKFLMSPIKTEQ------RQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 142 -----VNSLAEKL-KIRPHPN---H---------LTTLEACCKLISARLNEDALAHPEFV 183
                   L + L ++RP  N             +  L+ C       L+       +F 
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWV-ALDVC-------LSYKVQCKMDFK 183

Query: 184 I------PKGKPFPFLEI----------------DNGFTLPDPVLNKAAKILNLLYIHD- 220
           I          P   LE+                D+   +   + +  A++  LL     
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 221 ------LRDLQTK 227
                 L ++Q  
Sbjct: 244 ENCLLVLLNVQNA 256

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.5 bits (91), Expect = 8e-04
 Identities = 40/280 (14%), Positives = 80/280 (28%), Gaps = 87/280 (31%)

Query: 2   SHSNIIRKLKTLGYASPESFN--PIREKEFRNMVVWLEDQKIRIYKIEDRAE----LRKL 55
           S   ++  L+ L Y    ++          +  +  ++ +  R+ K +        L  +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253

Query: 56  ESPHWMNSFHQYC-----------TDVGLPITLLSTPLEQIEWLLGHASRLEYADNVDQY 104
           ++    N+F+  C           TD     T     L+     L            D+ 
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP----------DEV 303

Query: 105 KSQTAEFVSSNQSSAPK-VVSTNPLDNLNFDSPEFKKGVNSLAEKLKIRPHPNHL----- 158
           KS   +++       P+ V++TNP              ++ +AE +  R           
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPR------------RLSIIAESI--RDGLATWDNWKH 349

Query: 159 TTLEACCKLISARLNEDALAHPEF--------VIPKGKPFP--FLEI------------- 195
              +    +I + LN   L   E+        V P     P   L +             
Sbjct: 350 VNCDKLTTIIESSLN--VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV 407

Query: 196 ---------------DNGFTLPDPVLNKAAKILNLLYIHD 220
                          ++  ++P   L    K+ N   +H 
Sbjct: 408 VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
2igp_A	120	Retinoblastoma-associated protein HEC; calponin ho	88.71

>2igp_A Retinoblastoma-associated protein HEC; calponin homology (CH) domain, alpha helices, cell cycle; 1.80A {Homo sapiens}

Probab=88.71  E-value=2.2  Score=33.59  Aligned_cols=77  Identities=19%  Similarity=0.364  Sum_probs=55.8

Q ss_pred             HHHhhhCCCCC---CCCCCCCHHHHHHHHHHHhhchhccCCccchhhhcCCCCccHHHHHHHHHhhcCCCCCCCC-----
Q psy146            8 RKLKTLGYASP---ESFNPIREKEFRNMVVWLEDQKIRIYKIEDRAELRKLESPHWMNSFHQYCTDVGLPITLLS-----   79 (253)
Q Consensus         8 rkL~aL~Y~~~---~~~n~~d~~efr~lI~WLEdqkIR~y~iedR~~Lr~i~s~~W~~~~~kYl~dl~cP~~~~~-----   79 (253)
                      .-|..-||+.+   ..+.--.-++|.+++.||=.+--..|+..         ...+++.+-..+++|+||+....     
T Consensus        25 ~fL~~~~~~~~is~k~L~~Pt~kdF~~if~fL~~~idp~~~~~---------~~~~eeev~~~lK~L~YP~~isKS~L~a   95 (120)
T 2igp_A           25 EFLTENGYAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELP---------DTKFEEEVPRIFKDLGYPFALSKSSMYT   95 (120)
T ss_dssp             HHHHHTTCSSCCCTTTTSSCCHHHHHHHHHHHHTTTCTTCCCC---------CTTHHHHHHHHHHHTTCCSCCCHHHHHT
T ss_pred             HHHHHcCCCCCCCccccCCCCHHHHHHHHHHHHHhcCCCCccC---------CCChHHHHHHHHHHcCCCceeCHHHhcC
Confidence            45777888752   23444467899999999987655555442         46799999999999999997521     


Q ss_pred             ---C-----hHHHHHHHHHHHH
Q psy146           80 ---T-----PLEQIEWLLGHAS   93 (253)
Q Consensus        80 ---~-----~~~~ldWLl~~AV   93 (253)
                         .     --.+|.||.-++.
T Consensus        96 ~g~pHsWp~~L~~L~WLvel~~  117 (120)
T 2igp_A           96 VGAPHTWPHIVAALVWLIDCIK  117 (120)
T ss_dssp             TTSTTTHHHHHHHHHHHHHHHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHH
Confidence               0     5678999987763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00