Psyllid ID: psy15147

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MSPQQTHQYTSPSEEIVKYASTGGLPGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGRFPRRQQMEPRN
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcEEEEEccEEcccEEEEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEcccHEEEEEEccccccHccccccc
Coil and Loop (DISEMBL)
mspqqthqytspsEEIVKYAstgglpggpsidipsperpplrhidkyvrpeipclskrytmaTLTCVGFIISFGMKCNLGFaklqfegrfprrqqmeprn
Flexible Loop (DISEMBL)
mspqqthqytspSEEIVKYASTGGLPGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLqfegrfprrqqmeprn
Low Complexity Region (SEG)
MSPQQTHQYTSPSEEIVKYASTGGLPGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGRFPRRQQMEPRN
Disordered region (IsUnstruct)
******************************************HIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEG************
Disordered Region (DISOPRED)
********************************************DKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQ***************
Disordered Region (DISEMBL)
*************EEIVKYASTGGLPGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGRFPRRQQMEPRN
Disordered Region (DISPRO)
*************************************RPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGRFP*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSPQQTHQYTSPSEEIVKYASTGGLPGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGRFPRRQQMEPRN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q05B21	576	Vesicular glutamate trans	yes	N/A	0.53	0.092	0.355	0.0006

>sp|Q05B21|VGLU1_XENTR Vesicular glutamate transporter 1 OS=Xenopus tropicalis GN=slc17a7 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 6/59 (10%)

Query: 28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
          G +I++    RP ++   +  +P + C    L +RY +A ++ +GF ISFG++CNLG A
Sbjct: 30 GETIELTEEGRPVIKEEKR--QPVVDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVA 86

Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.
Xenopus tropicalis (taxid: 8364)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
322801982	668	hypothetical protein SINV_00684 [Solenop	0.61	0.091	0.709	1e-19
328782317	650	PREDICTED: vesicular glutamate transport	0.52	0.08	0.730	5e-19
350427261	642	PREDICTED: vesicular glutamate transport	0.52	0.080	0.75	7e-19
307206117	663	Vesicular glutamate transporter 2 [Harpe	0.52	0.078	0.788	8e-19
380013590	1968	PREDICTED: uncharacterized protein LOC10	0.52	0.026	0.730	8e-19
383860588	639	PREDICTED: vesicular glutamate transport	0.52	0.081	0.75	8e-19
328698968	617	PREDICTED: vesicular glutamate transport	0.59	0.095	0.711	9e-19
332018158	640	Vesicular glutamate transporter 2 [Acrom	0.61	0.095	0.693	9e-19
242025277	634	conserved hypothetical protein [Pediculu	0.56	0.088	0.714	1e-18
307180301	1844	Vesicular glutamate transporter 1 [Campo	0.52	0.028	0.75	2e-18

>gi|322801982|gb|EFZ22519.1| hypothetical protein SINV_00684 [Solenopsis invicta]

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/62 (70%), Positives = 50/62 (80%), Gaps = 1/62 (1%)

Query: 24  GLPGGPSID-IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFA 82
           G    PS+D +P PERPPLRHID Y  PE PCLSKRYT+ATL C+GFIISFGM+CN+G A
Sbjct: 56  GYRAQPSLDSLPEPERPPLRHIDTYCMPECPCLSKRYTIATLACIGFIISFGMRCNMGMA 115

Query: 83  KL 84
           KL
Sbjct: 116 KL 117

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782317|ref|XP_394228.4| PREDICTED: vesicular glutamate transporter 3-like [Apis mellifera]

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query: 33  IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
           +P PERPPLRHID Y +PE PCLSKRYT+ATL C+GF+ISFGM+CN+G AK+
Sbjct: 64  LPEPERPPLRHIDTYCKPECPCLSKRYTIATLACIGFVISFGMRCNMGMAKM 115

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427261|ref|XP_003494703.1| PREDICTED: vesicular glutamate transporter 3-like [Bombus impatiens]

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query: 33  IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
           +P PERPPLRHID Y +PE PCLSKRYT+ATL C+GFIISFGM+CN+G AK+
Sbjct: 64  LPEPERPPLRHIDTYCKPECPCLSKRYTIATLACIGFIISFGMRCNMGMAKM 115

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206117|gb|EFN84197.1| Vesicular glutamate transporter 2 [Harpegnathos saltator]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/52 (78%), Positives = 45/52 (86%)

Query: 33  IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
           +P PERPPLRHID Y  PE PCLSKRYT+ATL CVGFIISFGM+CN+G AKL
Sbjct: 64  LPEPERPPLRHIDTYCMPECPCLSKRYTIATLACVGFIISFGMRCNMGMAKL 115

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013590|ref|XP_003690835.1| PREDICTED: uncharacterized protein LOC100863279 [Apis florea]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/52 (73%), Positives = 46/52 (88%)

Query: 33   IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
            +P PERPPLRHID Y +PE PCLSKRYT+ATL C+GF+ISFGM+CN+G AK+
Sbjct: 1394 LPEPERPPLRHIDTYCKPECPCLSKRYTIATLACIGFVISFGMRCNMGMAKM 1445

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860588|ref|XP_003705771.1| PREDICTED: vesicular glutamate transporter 3-like [Megachile rotundata]

 Score = 97.8 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 46/52 (88%)

Query: 33  IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
           +P PERPPLRHID Y +PE PCLSKRYT+ATL C+GFIISFGM+CN+G AK+
Sbjct: 64  LPEPERPPLRHIDTYCKPECPCLSKRYTIATLACIGFIISFGMRCNMGMAKM 115

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698968|ref|XP_001943932.2| PREDICTED: vesicular glutamate transporter 1-like [Acyrthosiphon pisum]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 42/59 (71%), Positives = 51/59 (86%)

Query: 29  PSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFE 87
           P+  +PSP RPPLRHIDKY++PEIP LSKRYT+A LTCVGF+ISFGM+CN+  AKL+F 
Sbjct: 61  PTESLPSPVRPPLRHIDKYIKPEIPNLSKRYTIAILTCVGFMISFGMRCNMSMAKLKFH 119

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018158|gb|EGI58764.1| Vesicular glutamate transporter 2 [Acromyrmex echinatior]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 49/62 (79%), Gaps = 1/62 (1%)

Query: 24  GLPGGPSID-IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFA 82
           G    PS + +P PERPPLRHID Y  PE PCLSKRYT+ATL CVGF+ISFGM+CN+G A
Sbjct: 54  GYSTQPSFESLPEPERPPLRHIDTYCMPECPCLSKRYTIATLACVGFVISFGMRCNMGMA 113

Query: 83  KL 84
           KL
Sbjct: 114 KL 115

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242025277|ref|XP_002433052.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212518568|gb|EEB20314.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/56 (71%), Positives = 50/56 (89%)

Query: 32 DIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQFE 87
          ++P PERPPLR ID+YV+ E PCLS+RYT+A LTC+GF+ISFGM+CN+G AKLQFE
Sbjct: 34 ELPEPERPPLRLIDRYVKAECPCLSQRYTVAVLTCLGFVISFGMRCNMGMAKLQFE 89

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307180301|gb|EFN68334.1| Vesicular glutamate transporter 1 [Camponotus floridanus]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/52 (75%), Positives = 45/52 (86%)

Query: 33   IPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKL 84
            +P PERPPLRHID Y  PE PCLSKRYT+ATL C+GF+ISFGM+CN+G AKL
Sbjct: 1269 LPEPERPPLRHIDTYCMPECPCLSKRYTIATLACLGFVISFGMRCNMGMAKL 1320

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
FB|FBgn0031424	632	VGlut "Vesicular glutamate tra	0.61	0.096	0.548	2.1e-13
ZFIN|ZDB-GENE-050105-5	582	slc17a7 "solute carrier family	0.53	0.091	0.389	0.00025

FB|FBgn0031424 VGlut "Vesicular glutamate transporter" [Drosophila melanogaster (taxid:7227)]

 Score = 185 (70.2 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 34/62 (54%), Positives = 44/62 (70%)

Query:    26 PGGPSIDIPSPERPPLRHIDKYVRPEIPCLSKRYTMATLTCVGFIISFGMKCNLGFAKLQ 85
             P  P+      ERPPLR IDKY + E PC+  RYT+AT+ CVGF+I+FGM+CN+  AKL+
Sbjct:    64 PDSPA-SFEEIERPPLRKIDKYCKAECPCMPARYTIATMACVGFMIAFGMRCNMSAAKLK 122

Query:    86 FE 87
              E
Sbjct:   123 GE 124

GO:0005316 "high affinity inorganic phosphate:sodium symporter activity" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISM;IEA;ISS

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005313 "L-glutamate transmembrane transporter activity" evidence=IC;ISA

GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP

GO:0030285 "integral to synaptic vesicle membrane" evidence=IC

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005326 "neurotransmitter transporter activity" evidence=IMP

GO:0015813 "L-glutamate transport" evidence=ISA

GO:0031982 "vesicle" evidence=IDA

ZFIN|ZDB-GENE-050105-5 slc17a7 "solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7" [Danio rerio (taxid:7955)]

 Score = 100 (40.3 bits), Expect = 0.00025, P = 0.00025
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query:    28 GPSIDIPSPERPPLRHIDKYVRPEIPC----LSKRYTMATLTCVGFIISFGMKCNLGFA 82
             G +I++ +  RP L  +++   P + C    L +RY +A L+ +GF ISFG++CNLG A
Sbjct:    30 GETIELSAEGRPEL--VEEKELPIVDCTCFGLPRRYIIAILSGLGFCISFGIRCNLGVA 86


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100       100   0.00091  102 3  11 22  0.40    30
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  519 (55 KB)
  Total size of DFA:  112 KB (2076 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.16u 0.09s 12.25t   Elapsed:  00:00:02
  Total cpu time:  12.16u 0.09s 12.25t   Elapsed:  00:00:02
  Start:  Thu Aug 15 12:50:42 2013   End:  Thu Aug 15 12:50:44 2013

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	97.19

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=97.19  E-value=0.00067  Score=53.56  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=32.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHhhheecceeeeecccC
Q psy15147         55 LSKRYTMATLTCVGFIISFGMKCNLGFAKLQFEGR   89 (100)
Q Consensus        55 lp~RyvlAiL~flGf~i~Y~mRvNLSVAIVaMVn~   89 (100)
                      .+.||.+.+++|+++.++|..|+|+++|+++|.++
T Consensus        14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~   48 (465)
T TIGR00894        14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNK   48 (465)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccC
Confidence            57899999999999999999999999999999873

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00