Psyllid ID: psy15178

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100---
Protein Sequence
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Secondary Structure (PSIPRED)
cHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccccccccccccccEEEcccccHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEHHHHHHHHHcccccEccccccccHHHccEEEEEEccEEccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEc
Coil and Loop (DISEMBL)
MILIAFSLIVTTrqyvgnpidcvhtkdipedvlNTYCWIHSTYTIRAAFKKKVGvavpypgvdnsrgkvedrktygyyhlsctkgylasfyagntcssvllvg
Flexible Loop (DISEMBL)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVpypgvdnsrgkvedrKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Low Complexity Region (SEG)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Disordered region (IsUnstruct)
*ILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLL**
Disordered Region (DISOPRED)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVP**GV******VEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Disordered Region (DISEMBL)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Disordered Region (DISPRO)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHLSCTKGYLASFYAGNTCSSVLLVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	103	2.2.26 [Sep-21-2011]
Q1DH70	372	Innexin shaking-B OS=Aede	N/A	N/A	0.796	0.220	0.743	3e-32
P33085	372	Innexin shaking-B OS=Dros	yes	N/A	0.796	0.220	0.719	6e-32
Q7PXN1	373	Innexin shaking-B OS=Anop	yes	N/A	0.796	0.219	0.674	1e-28
P27716	362	Innexin inx1 OS=Drosophil	no	N/A	0.786	0.223	0.463	8e-17
Q9XYN1	359	Innexin inx2 OS=Schistoce	N/A	N/A	0.786	0.225	0.475	4e-16
Q9XYN0	361	Innexin inx1 OS=Schistoce	N/A	N/A	0.786	0.224	0.463	2e-14
Q9V427	367	Innexin inx2 OS=Drosophil	no	N/A	0.786	0.220	0.451	2e-14
Q9VAS7	395	Innexin inx3 OS=Drosophil	no	N/A	0.737	0.192	0.371	4e-10
O61715	454	Innexin-19 OS=Caenorhabdi	yes	N/A	0.436	0.099	0.375	0.0001
A8WVX4	439	Innexin-19 OS=Caenorhabdi	N/A	N/A	0.436	0.102	0.375	0.0001

>sp|Q1DH70|SHAKB_AEDAE Innexin shaking-B OS=Aedes aegypti GN=shakB PE=3 SV=1

 Score =  137 bits (344), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL+AFSLIVTT+QYVGNPIDCVHTKDIPE+VLNTYCWIHSTY +++ F KKVG  VPYP
Sbjct: 33  MILMAFSLIVTTKQYVGNPIDCVHTKDIPEEVLNTYCWIHSTYALKSLFLKKVGSEVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV NS GK  D+K Y YY   C
Sbjct: 93  GVGNSDGKNIDKKIYKYYQWVC 114

Structural component of the gap junctions at electrical synapses in distal and mid-depth levels in the lamina.
Aedes aegypti (taxid: 7159)

>sp|P33085|SHAKB_DROME Innexin shaking-B OS=Drosophila melanogaster GN=shakB PE=1 SV=3

 Score =  135 bits (341), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct: 33  MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+ NS G   D+K Y YY   C
Sbjct: 93  GIGNSDGDPADKKHYKYYQWVC 114

Structural component of the gap junctions at electrical synapses in distal and mid-depth levels in the lamina. Isoform Lethal forms voltage sensitive intercellular channels through homotypic interactions.

Drosophila melanogaster (taxid: 7227)

>sp|Q7PXN1|SHAKB_ANOGA Innexin shaking-B OS=Anopheles gambiae GN=shakB PE=3 SV=1

 Score =  124 bits (312), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 1/83 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           +IL++FSLIVTTRQYVGNPIDCVHTKDIP DVLNTYCWIHST+ +++ F K+VG  VPYP
Sbjct: 33  IILMSFSLIVTTRQYVGNPIDCVHTKDIPADVLNTYCWIHSTFALKSLFLKEVGKDVPYP 92

Query: 61  GVDNS-RGKVEDRKTYGYYHLSC 82
           GV NS      D+K Y YY   C
Sbjct: 93  GVGNSAEATAADKKIYKYYQWVC 115

Structural component of the gap junctions at electrical synapses in distal and mid-depth levels in the lamina.

Anopheles gambiae (taxid: 7165)

>sp|P27716|INX1_DROME Innexin inx1 OS=Drosophila melanogaster GN=ogre PE=1 SV=1

 Score = 85.5 bits (210), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           ++L+  SLI+T  QYVG PI C+    +P  V+NT+CWIHST+T+  AF+++VG  V +P
Sbjct: 33  VLLLTCSLIITATQYVGQPISCI-VNGVPPHVVNTFCWIHSTFTMPDAFRRQVGREVAHP 91

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV N  G  + +K Y YY   C
Sbjct: 92  GVANDFGDEDAKKYYTYYQWVC 113

Structural component of the gap junctions. Essential for generation and/or maintenance of postembryonic neuroblasts and normal development of optic lobe.

Drosophila melanogaster (taxid: 7227)

>sp|Q9XYN1|INX2_SCHAM Innexin inx2 OS=Schistocerca americana GN=inx2 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           +ILIAFSL+VT+RQY+G+PIDC+   +IP  V++TYCWI+ST+TI      K+G+ V +P
Sbjct: 33  IILIAFSLLVTSRQYIGDPIDCI-VDEIPLAVMDTYCWIYSTFTIPNRLNGKIGLEVAHP 91

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV       ++ K + YY   C
Sbjct: 92  GVGAHVAGKDEVKYHKYYQWVC 113

Structural components of the gap junctions.

Schistocerca americana (taxid: 7009)

>sp|Q9XYN0|INX1_SCHAM Innexin inx1 OS=Schistocerca americana GN=inx1 PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           ++L+  SLI+T  QYVGNPI C+    +P   +NTYCWI ST+T+  AF ++VG  V +P
Sbjct: 33  VLLLTCSLIITATQYVGNPIHCI-VNGLPVRPINTYCWITSTFTMPDAFLRQVGSEVAHP 91

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV N  G  + +K Y YY   C
Sbjct: 92  GVANDFGDEDAKKYYTYYQWVC 113

Structural components of the gap junctions.

Schistocerca americana (taxid: 7009)

>sp|Q9V427|INX2_DROME Innexin inx2 OS=Drosophila melanogaster GN=inx2 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           +ILIAFSL+VT+RQY+G+PIDC+   +IP  V++TYCWI+ST+T+        G  V  P
Sbjct: 33  IILIAFSLLVTSRQYIGDPIDCI-VDEIPLGVMDTYCWIYSTFTVPERLTGITGRDVVQP 91

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV +     ++ K + YY   C
Sbjct: 92  GVGSHVEGEDEVKYHKYYQWVC 113

Structural components of the gap junctions.

Drosophila melanogaster (taxid: 7227)

>sp|Q9VAS7|INX3_DROME Innexin inx3 OS=Drosophila melanogaster GN=inx3 PE=1 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 2   ILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPG 61
           IL    +IVT    +G+PI C++   IP  V+NT+CWI  TYTI     +++G  V  PG
Sbjct: 40  ILFTCCIIVTANNLIGDPISCINDGAIPMHVINTFCWITYTYTIPGQQHRQIGTDVAGPG 99

Query: 62  VDNSRGKVEDRKTYGYYH 79
           + N  G  ++++ + YY 
Sbjct: 100 LGNEYG--QEKRYHSYYQ 115

Structural components of the gap junctions.

Drosophila melanogaster (taxid: 7227)

>sp|O61715|INX19_CAEEL Innexin-19 OS=Caenorhabditis elegans GN=inx-19 PE=1 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 1  MILIAFSLIVTTRQYVGNPIDC---VHTKDIPEDVLNTYCWIHSTYTI 45
          +IL    L+++ +QY G PI+C    H+++  E+ + +YCWI +TY I
Sbjct: 50 LILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYWI 97

Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling. Required for the left and right AWC olfactory neurons to establish asymmetric patterns of gene expression during embryogenesis. Acts autonomously.

Caenorhabditis elegans (taxid: 6239)

>sp|A8WVX4|INX19_CAEBR Innexin-19 OS=Caenorhabditis briggsae GN=inx-19 PE=3 SV=3

 Score = 45.1 bits (105), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)

Query: 1  MILIAFSLIVTTRQYVGNPIDC---VHTKDIPEDVLNTYCWIHSTYTI 45
          +IL    L+++ +QY G PI+C    H+++  E+ + +YCWI +TY I
Sbjct: 34 LILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYWI 81

Structural component of the gap junctions that specifically coordinates left-right asymmetry in the developing nervous system. Acts by forming gap junction network linking embryonic neurons and providing electrical coupling between cells, leading to promote or inhibit AWC signaling.

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
193624776	369	PREDICTED: innexin shaking-B-like [Acyrt	0.796	0.222	0.878	3e-38
224381708	364	innexin 4 [Schistocerca gregaria]	0.796	0.225	0.792	1e-34
242006872	367	Innexin inx2, putative [Pediculus humanu	0.796	0.223	0.768	4e-34
332025145	539	Innexin shaking-B [Acromyrmex echinatior	0.873	0.166	0.681	2e-31
198469511	372	GA25656 [Drosophila pseudoobscura pseudo	0.796	0.220	0.719	9e-31
157142149	372	innexin [Aedes aegypti] gi|121958455|sp|	0.796	0.220	0.743	1e-30
170069007	372	innexin [Culex quinquefasciatus] gi|1678	0.796	0.220	0.731	2e-30
195130483	372	GI15107 [Drosophila mojavensis] gi|19539	0.796	0.220	0.719	2e-30
194897318	372	GG17574 [Drosophila erecta] gi|195346037	0.796	0.220	0.719	2e-30
24643568	372	shaking B, isoform A [Drosophila melanog	0.796	0.220	0.719	2e-30

>gi|193624776|ref|XP_001944798.1| PREDICTED: innexin shaking-B-like [Acyrthosiphon pisum]

 Score =  162 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 72/82 (87%), Positives = 76/82 (92%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           M+L AFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTI+ AFKKKVGVAVPYP
Sbjct: 33  MLLSAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIKEAFKKKVGVAVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GVDN+RGK +DRKTYGYY   C
Sbjct: 93  GVDNTRGKADDRKTYGYYQWVC 114

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|224381708|gb|ACN41956.1| innexin 4 [Schistocerca gregaria]

 Score =  149 bits (377), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/82 (79%), Positives = 73/82 (89%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL+AFSLIVTTRQYVGNPIDC+HTKDIPEDVLNT+CWIHSTYTI++AF KKVGV VP+ 
Sbjct: 33  MILVAFSLIVTTRQYVGNPIDCIHTKDIPEDVLNTFCWIHSTYTIKSAFHKKVGVDVPHK 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+DNSRG  EDRK+Y YY   C
Sbjct: 93  GIDNSRGSQEDRKSYMYYQWVC 114

Source: Schistocerca gregaria

Species: Schistocerca gregaria

Genus: Schistocerca

Family: Acrididae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242006872|ref|XP_002424268.1| Innexin inx2, putative [Pediculus humanus corporis] gi|212507645|gb|EEB11530.1| Innexin inx2, putative [Pediculus humanus corporis]

 Score =  148 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/82 (76%), Positives = 72/82 (87%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           M+LIAFSLIVTTRQYVGNPIDC+HTKDIPEDVLNT+CWIHSTYTI+ AF K+VG  VPYP
Sbjct: 33  MMLIAFSLIVTTRQYVGNPIDCIHTKDIPEDVLNTFCWIHSTYTIKTAFSKQVGKEVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GVD+SRG ++D+K Y YY   C
Sbjct: 93  GVDSSRGNIQDQKCYRYYQWVC 114

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025145|gb|EGI65325.1| Innexin shaking-B [Acromyrmex echinatior]

 Score =  139 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 1/91 (1%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           ++LIAFSLIVTTRQYVGNPIDC+H+KD+PEDVLNTYCWIHSTYTI AA++K+ G+ VP+P
Sbjct: 33  ILLIAFSLIVTTRQYVGNPIDCIHSKDLPEDVLNTYCWIHSTYTITAAYRKREGLEVPFP 92

Query: 61  GVDNSRGKVE-DRKTYGYYHLSCTKGYLASF 90
           GVDNS+   E +RK Y YY   C   +L SF
Sbjct: 93  GVDNSKSYSETERKEYKYYQWVCFMLFLQSF 123

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198469511|ref|XP_002134330.1| GA25656 [Drosophila pseudoobscura pseudoobscura] gi|198146905|gb|EDY72957.1| GA25656 [Drosophila pseudoobscura pseudoobscura]

 Score =  137 bits (345), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct: 33  MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+ NS G   D+K Y YY   C
Sbjct: 93  GIGNSDGDASDKKHYKYYQWVC 114

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157142149|ref|XP_001647835.1| innexin [Aedes aegypti] gi|121958455|sp|Q1DH70.1|SHAKB_AEDAE RecName: Full=Innexin shaking-B gi|108868273|gb|EAT32503.1| AAEL014227-PA [Aedes aegypti]

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/82 (74%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL+AFSLIVTT+QYVGNPIDCVHTKDIPE+VLNTYCWIHSTY +++ F KKVG  VPYP
Sbjct: 33  MILMAFSLIVTTKQYVGNPIDCVHTKDIPEEVLNTYCWIHSTYALKSLFLKKVGSEVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV NS GK  D+K Y YY   C
Sbjct: 93  GVGNSDGKNIDKKIYKYYQWVC 114

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170069007|ref|XP_001869073.1| innexin [Culex quinquefasciatus] gi|167864997|gb|EDS28380.1| innexin [Culex quinquefasciatus]

 Score =  136 bits (343), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/82 (73%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLIVTT+QYVGNPIDCVHTKDIPE+VLNTYCWIHSTY +++ F KKVG  VPYP
Sbjct: 33  MILMSFSLIVTTKQYVGNPIDCVHTKDIPEEVLNTYCWIHSTYALKSLFLKKVGSEVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           GV NS GK  D+K Y YY   C
Sbjct: 93  GVGNSDGKSLDKKIYKYYQWVC 114

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195130483|ref|XP_002009681.1| GI15107 [Drosophila mojavensis] gi|195393162|ref|XP_002055223.1| GJ18913 [Drosophila virilis] gi|193908131|gb|EDW06998.1| GI15107 [Drosophila mojavensis] gi|194149733|gb|EDW65424.1| GJ18913 [Drosophila virilis]

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct: 33  MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+ NS G   D+K Y YY   C
Sbjct: 93  GIGNSDGDPADKKHYKYYQWVC 114

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194897318|ref|XP_001978633.1| GG17574 [Drosophila erecta] gi|195346037|ref|XP_002039575.1| GM22657 [Drosophila sechellia] gi|195482145|ref|XP_002101930.1| GE15333 [Drosophila yakuba] gi|190650282|gb|EDV47560.1| GG17574 [Drosophila erecta] gi|194134801|gb|EDW56317.1| GM22657 [Drosophila sechellia] gi|194189454|gb|EDX03038.1| GE15333 [Drosophila yakuba]

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct: 33  MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+ NS G   D+K Y YY   C
Sbjct: 93  GIGNSDGDPADKKHYKYYQWVC 114

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24643568|ref|NP_728361.1| shaking B, isoform A [Drosophila melanogaster] gi|12644213|sp|P33085.3|SHAKB_DROME RecName: Full=Innexin shaking-B; AltName: Full=Protein passover gi|999305|gb|AAB34769.1| Shak-B (lethal) protein [Drosophila melanogaster] gi|7295572|gb|AAF50883.1| shaking B, isoform A [Drosophila melanogaster] gi|1095427|prf||2108404B Passover gene

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct: 33  MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query: 61  GVDNSRGKVEDRKTYGYYHLSC 82
           G+ NS G   D+K Y YY   C
Sbjct: 93  GIGNSDGDPADKKHYKYYQWVC 114

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	103
UNIPROTKB|Q1DH70	372	shakB "Innexin shaking-B" [Aed	0.796	0.220	0.743	3e-30
FB|FBgn0085387	372	shakB "shaking B" [Drosophila	0.796	0.220	0.719	6.2e-30
UNIPROTKB|Q7PXN1	373	shakB "Innexin shaking-B" [Ano	0.796	0.219	0.674	3.5e-27
FB|FBgn0004646	362	ogre "optic ganglion reduced"	0.786	0.223	0.463	9.5e-17
UNIPROTKB|Q9XYN1	359	inx2 "Innexin inx2" [Schistoce	0.776	0.222	0.493	3.4e-16
UNIPROTKB|Q9XYN0	361	inx1 "Innexin inx1" [Schistoce	0.786	0.224	0.463	2.1e-15
FB|FBgn0027108	367	Inx2 "Innexin 2" [Drosophila m	0.776	0.217	0.481	4.9e-14
UNIPROTKB|Q23157	465	inx-11 "Innexin-11" [Caenorhab	0.427	0.094	0.361	8.5e-06
WB|WBGene00002133	529	inx-11 [Caenorhabditis elegans	0.427	0.083	0.361	1.2e-05
UNIPROTKB|A8WVX4	439	inx-19 "Innexin-19" [Caenorhab	0.436	0.102	0.375	4.9e-05

UNIPROTKB|Q1DH70 shakB "Innexin shaking-B" [Aedes aegypti (taxid:7159)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 61/82 (74%), Positives = 68/82 (82%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             MIL+AFSLIVTT+QYVGNPIDCVHTKDIPE+VLNTYCWIHSTY +++ F KKVG  VPYP
Sbjct:    33 MILMAFSLIVTTKQYVGNPIDCVHTKDIPEEVLNTYCWIHSTYALKSLFLKKVGSEVPYP 92

Query:    61 GVDNSRGKVEDRKTYGYYHLSC 82
             GV NS GK  D+K Y YY   C
Sbjct:    93 GVGNSDGKNIDKKIYKYYQWVC 114

GO:0005243 "gap junction channel activity" evidence=ISS

GO:0005921 "gap junction" evidence=ISS

GO:0009416 "response to light stimulus" evidence=ISS

GO:0009881 "photoreceptor activity" evidence=ISS

GO:0016264 "gap junction assembly" evidence=ISS

FB|FBgn0085387 shakB "shaking B" [Drosophila melanogaster (taxid:7227)]

 Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
 Identities = 59/82 (71%), Positives = 68/82 (82%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             MIL++FSLI+TTRQYVGNPIDCVHTKDIPEDVLNTYCWI STYT+++ F KK GV+VPYP
Sbjct:    33 MILMSFSLIITTRQYVGNPIDCVHTKDIPEDVLNTYCWIQSTYTLKSLFLKKQGVSVPYP 92

Query:    61 GVDNSRGKVEDRKTYGYYHLSC 82
             G+ NS G   D+K Y YY   C
Sbjct:    93 GIGNSDGDPADKKHYKYYQWVC 114

GO:0007630 "jump response" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IMP

GO:0005921 "gap junction" evidence=IMP;NAS;IDA

GO:0005243 "gap junction channel activity" evidence=IMP

GO:0016264 "gap junction assembly" evidence=IMP

GO:0009881 "photoreceptor activity" evidence=IMP

GO:0007602 "phototransduction" evidence=IMP

GO:0010496 "intercellular transport" evidence=ISS

GO:0010644 "cell communication by electrical coupling" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0003254 "regulation of membrane depolarization" evidence=IMP

UNIPROTKB|Q7PXN1 shakB "Innexin shaking-B" [Anopheles gambiae (taxid:7165)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 56/83 (67%), Positives = 65/83 (78%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             +IL++FSLIVTTRQYVGNPIDCVHTKDIP DVLNTYCWIHST+ +++ F K+VG  VPYP
Sbjct:    33 IILMSFSLIVTTRQYVGNPIDCVHTKDIPADVLNTYCWIHSTFALKSLFLKEVGKDVPYP 92

Query:    61 GVDNS-RGKVEDRKTYGYYHLSC 82
             GV NS      D+K Y YY   C
Sbjct:    93 GVGNSAEATAADKKIYKYYQWVC 115

GO:0005243 "gap junction channel activity" evidence=ISS

GO:0005921 "gap junction" evidence=ISS

GO:0009416 "response to light stimulus" evidence=ISS

GO:0009881 "photoreceptor activity" evidence=ISS

GO:0016264 "gap junction assembly" evidence=ISS

FB|FBgn0004646 ogre "optic ganglion reduced" [Drosophila melanogaster (taxid:7227)]

 Score = 210 (79.0 bits), Expect = 9.5e-17, P = 9.5e-17
 Identities = 38/82 (46%), Positives = 54/82 (65%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             ++L+  SLI+T  QYVG PI C+    +P  V+NT+CWIHST+T+  AF+++VG  V +P
Sbjct:    33 VLLLTCSLIITATQYVGQPISCI-VNGVPPHVVNTFCWIHSTFTMPDAFRRQVGREVAHP 91

Query:    61 GVDNSRGKVEDRKTYGYYHLSC 82
             GV N  G  + +K Y YY   C
Sbjct:    92 GVANDFGDEDAKKYYTYYQWVC 113

GO:0007632 "visual behavior" evidence=ISS

GO:0016021 "integral to membrane" evidence=NAS

GO:0007399 "nervous system development" evidence=NAS

GO:0005921 "gap junction" evidence=IDA;NAS

GO:0007602 "phototransduction" evidence=IMP

GO:0010496 "intercellular transport" evidence=ISS

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0005243 "gap junction channel activity" evidence=IC

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q9XYN1 inx2 "Innexin inx2" [Schistocerca americana (taxid:7009)]

 Score = 205 (77.2 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 41/83 (49%), Positives = 59/83 (71%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             +ILIAFSL+VT+RQY+G+PIDC+   +IP  V++TYCWI+ST+TI      K+G+ V +P
Sbjct:    33 IILIAFSLLVTSRQYIGDPIDCI-VDEIPLAVMDTYCWIYSTFTIPNRLNGKIGLEVAHP 91

Query:    61 GVD-NSRGKVEDRKTYGYYHLSC 82
             GV  +  GK ++ K + YY   C
Sbjct:    92 GVGAHVAGK-DEVKYHKYYQWVC 113

GO:0005243 "gap junction channel activity" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005921 "gap junction" evidence=IDA

UNIPROTKB|Q9XYN0 inx1 "Innexin inx1" [Schistocerca americana (taxid:7009)]

 Score = 198 (74.8 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 38/82 (46%), Positives = 52/82 (63%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             ++L+  SLI+T  QYVGNPI C+    +P   +NTYCWI ST+T+  AF ++VG  V +P
Sbjct:    33 VLLLTCSLIITATQYVGNPIHCI-VNGLPVRPINTYCWITSTFTMPDAFLRQVGSEVAHP 91

Query:    61 GVDNSRGKVEDRKTYGYYHLSC 82
             GV N  G  + +K Y YY   C
Sbjct:    92 GVANDFGDEDAKKYYTYYQWVC 113

GO:0005243 "gap junction channel activity" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005921 "gap junction" evidence=IDA

FB|FBgn0027108 Inx2 "Innexin 2" [Drosophila melanogaster (taxid:7227)]

 Score = 186 (70.5 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 40/83 (48%), Positives = 54/83 (65%)

Query:     1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
             +ILIAFSL+VT+RQY+G+PIDC+   +IP  V++TYCWI+ST+T+        G  V  P
Sbjct:    33 IILIAFSLLVTSRQYIGDPIDCI-VDEIPLGVMDTYCWIYSTFTVPERLTGITGRDVVQP 91

Query:    61 GVDNSRGKVEDR-KTYGYYHLSC 82
             GV  S  + ED  K + YY   C
Sbjct:    92 GV-GSHVEGEDEVKYHKYYQWVC 113

GO:0005921 "gap junction" evidence=ISS;IDA

GO:0005243 "gap junction channel activity" evidence=IC;IDA

GO:0010496 "intercellular transport" evidence=IDA

GO:0007440 "foregut morphogenesis" evidence=IMP

GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP

GO:0042048 "olfactory behavior" evidence=IMP

GO:0016327 "apicolateral plasma membrane" evidence=IDA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0007154 "cell communication" evidence=IDA

GO:0030727 "germarium-derived female germ-line cyst formation" evidence=IMP

GO:0007293 "germarium-derived egg chamber formation" evidence=IMP

UNIPROTKB|Q23157 inx-11 "Innexin-11" [Caenorhabditis elegans (taxid:6239)]

 Score = 97 (39.2 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query:     2 ILIAFSLIVTTRQYVGNPIDCVHTKDIP---EDVLNTYCWIHSTYTI 45
             IL+AFS++++ +Q+ G PI+C+     P   E     YCW   TY +
Sbjct:    34 ILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFV 80

GO:0005243 "gap junction channel activity" evidence=ISS

GO:0055077 "gap junction hemi-channel activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005921 "gap junction" evidence=ISS

WB|WBGene00002133 inx-11 [Caenorhabditis elegans (taxid:6239)]

 Score = 97 (39.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query:     2 ILIAFSLIVTTRQYVGNPIDCVHTKDIP---EDVLNTYCWIHSTYTI 45
             IL+AFS++++ +Q+ G PI+C+     P   E     YCW   TY +
Sbjct:    98 ILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYFV 144

GO:0005921 "gap junction" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|A8WVX4 inx-19 "Innexin-19" [Caenorhabditis briggsae (taxid:6238)]

 Score = 105 (42.0 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 18/48 (37%), Positives = 31/48 (64%)

Query:     1 MILIAFSLIVTTRQYVGNPIDC---VHTKDIPEDVLNTYCWIHSTYTI 45
             +IL    L+++ +QY G PI+C    H+++  E+ + +YCWI +TY I
Sbjct:    34 LILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYWI 81

GO:0005243 "gap junction channel activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005921 "gap junction" evidence=ISS

GO:0055077 "gap junction hemi-channel activity" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7PXN1	SHAKB_ANOGA	No assigned EC number	0.6746	0.7961	0.2198	yes	N/A
P33085	SHAKB_DROME	No assigned EC number	0.7195	0.7961	0.2204	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	103
pfam00876	341	pfam00876, Innexin, Innexin	5e-20
PHA02748	360	PHA02748, PHA02748, viral inexin-like protein; Pro	1e-17

>gnl|CDD|216168 pfam00876, Innexin, Innexin

 Score = 81.9 bits (203), Expect = 5e-20
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 11/81 (13%)

Query: 1  MILIAFSLIVTTRQYVGNPIDCVHTKDIP---EDVLNTYCWIHSTYTIRAAFKKKVGVAV 57
          +IL+AFSL+V+ +QY G+PI+C    + P   E+  N YCW+ +TY +       +G  V
Sbjct: 14 IILLAFSLLVSAKQYFGDPIECWVPAEFPGSWEEYANNYCWVQNTYFLP------LGEEV 67

Query: 58 PYPGVDNSRGKVEDRKTYGYY 78
          P    +  R    +RK   YY
Sbjct: 68 PGTDPEEDR--ERERKYITYY 86

This family includes the drosophila proteins Ogre and shaking-B, and the C. elegans proteins Unc-7 and Unc-9. Members of this family are integral membrane proteins which are involved in the formation of gap junctions. This family has been named the Innexins. Length = 341

>gnl|CDD|165115 PHA02748, PHA02748, viral inexin-like protein; Provisional

 Score = 75.8 bits (187), Expect = 1e-17
 Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 4/79 (5%)

Query: 1   MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYP 60
           +IL+AFSL+VT+RQY G+PIDC    D P   LNTYC++ ST+ +       V   VP P
Sbjct: 33  IILLAFSLLVTSRQYFGDPIDC-DFPDYPNGSLNTYCYVQSTFLVERKVTHTVNSTVPDP 91

Query: 61  GVDNSRGKVEDR-KTYGYY 78
           GV  S    ED  + YGYY
Sbjct: 92  GV--SGDTEEDELRYYGYY 108

Length = 360

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	103
PHA02748	360	viral inexin-like protein; Provisional	100.0
PF00876	348	Innexin: Innexin; InterPro: IPR000990 The pannexin	100.0

>PHA02748 viral inexin-like protein; Provisional

Probab=100.00  E-value=6.8e-40  Score=259.56  Aligned_cols=97  Identities=37%  Similarity=0.701  Sum_probs=88.0

Q ss_pred             ChhhHHHHHHhhhhhcCCCcccccCCCCChhhhhhhhhhheeeEEeccccccccccccCCCCCCCCCCcccceeeeeccc
Q psy15178          1 MILIAFSLIVTTRQYVGNPIDCVHTKDIPEDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGYYHL   80 (103)
Q Consensus         1 ~iL~~~s~Lvt~kqy~G~PI~C~~~~~~~~~y~~~yCwi~~Ty~v~~~~~~~~~~~~p~pg~~~~~~~~~~~~~~~YYQW   80 (103)
                      +||++||+|+|+|||||+||+||.| +.+++|+|+||||||||+++++.+...++++|+||++. +.+++++++++||||
T Consensus        33 ~iL~~~silvs~kQy~G~PI~C~~p-~~~~~~~n~yCwi~~Ty~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~YYQW  110 (360)
T PHA02748         33 IILLAFSLLVTSRQYFGDPIDCDFP-DYPNGSLNTYCYVQSTFLVERKVTHTVNSTVPDPGVSG-DTEEDELRYYGYYQW  110 (360)
T ss_pred             HHHHHHHHHHHHHHHCCCCeEeccC-CCccchhhceeeeeeEEEeecccccccccccCCCCCCC-CccccceeEeceeeH
Confidence            4899999999999999999999976 56688999999999999999988888888888888874 356678899999999


Q ss_pred             hhHHHHHHHHHhhhchhhe
Q psy15178         81 SCTKGYLASFYAGNTCSSV   99 (103)
Q Consensus        81 VpfvL~lQA~lf~~P~~~~   99 (103)
                      |||+|++||++||+|+++|
T Consensus       111 VpfvL~lQA~lFYiP~~iW  129 (360)
T PHA02748        111 VFITLFLQAVFFYIPHYIW  129 (360)
T ss_pred             HHHHHHHHHHHHHchHHHH
Confidence            9999999999999999998

>PF00876 Innexin: Innexin; InterPro: IPR000990 The pannexin family combines invertebrate gap junction proteins and their vertebrate homologs

Probab=100.00  E-value=2.8e-36  Score=236.74  Aligned_cols=92  Identities=26%  Similarity=0.498  Sum_probs=78.7

Q ss_pred             ChhhHHHHHHhhhhhcCCCcccccCCCCC---hhhhhhhhhhheeeEEeccccccccccccCCCCCCCCCCcccceeeee
Q psy15178          1 MILIAFSLIVTTRQYVGNPIDCVHTKDIP---EDVLNTYCWIHSTYTIRAAFKKKVGVAVPYPGVDNSRGKVEDRKTYGY   77 (103)
Q Consensus         1 ~iL~~~s~Lvt~kqy~G~PI~C~~~~~~~---~~y~~~yCwi~~Ty~v~~~~~~~~~~~~p~pg~~~~~~~~~~~~~~~Y   77 (103)
                      ++|+++|+|+++|||||+||+||+|++++   ++|+|+|||++|||+++.+      +++|.+  ++...+.+++++++|
T Consensus        14 ~lL~~~a~lv~~kqy~G~PI~C~~P~~f~~~~~~y~~~yCwi~~Ty~v~~~------~~~~~~--~~~~~~~~~~~~i~Y   85 (348)
T PF00876_consen   14 ILLLFFALLVSAKQYFGSPIQCWVPAEFTGSWEEYANSYCWIQNTYFVPMN------EDVPGT--DPEWRREREKREISY   85 (348)
T ss_pred             HHHHHHHHHHHHHHhcCCCceeeCCCCCCcchHhHHHhhhcccceEecccc------ccCCCC--ccccccccccceEee
Confidence            37999999999999999999999999884   9999999999999999876      455522  211123457899999


Q ss_pred             ccchhHHHHHHHHHhhhchhhee
Q psy15178         78 YHLSCTKGYLASFYAGNTCSSVL  100 (103)
Q Consensus        78 YQWVpfvL~lQA~lf~~P~~~~~  100 (103)
                      ||||||+|++||+|||+|+++|=
T Consensus        86 YQWVPfiL~lQA~lfylP~~iW~  108 (348)
T PF00876_consen   86 YQWVPFILLLQAILFYLPHLIWR  108 (348)
T ss_pred             ehhhHHHHHHHHHHHHhHHHHHH
Confidence            99999999999999999999984

These proteins have been named innexins []. Gap junctions are composed of membrane proteins, which form a channel permeable for ions and small molecules connecting cytoplasm of adjacent cells. Although gap junctions provide similar functions in all multicellular organisms, until recently it was believed that vertebrates and invertebrates use unrelated proteins for this purpose. While the connexins family of gap junction proteins is well- characterised in vertebrates, no homologs have been found in invertebrates. In turn, gap junction molecules with no sequence homology to connexins have been identified in insects and nematodes. It has been suggested that these proteins are specific invertebrate gap junctions, and they were thus named innexins (invertebrate analog of connexins) []. As innexin homologs were recently identified in other taxonomic groups including vertebrates, indicating their ubiquitous distribution in the animal kingdom, they were called pannexins (from the Latin pan-all, throughout, and nexus-connection, bond) [, , ]. Genomes of vertebrates carry probably a conserved set of 3 pannexin paralogs (PANX1, PANX2 and PANX3). Invertebrate genomes may contain more than a dozen pannexin (innexin) genes. Vinnexins, viral homologs of pannexins/innexins, were identified in Polydnaviruses that occur in obligate symbiotic associations with parasitoid wasps. It was suggested that virally encoded vinnexin proteins may function to alter gap junction proteins in infected host cells, possibly modifying cell-cell communication during encapsulation responses in parasitized insects [, ]. Structurally pannexins are simillar to connexins. Both types of protein consist of a cytoplasmic N-terminal domain, followed by four transmembrane segments that delimit two extracellular and one cytoplasmic loops; the C- terminal domain is cytoplasmic.; GO: 0005921 gap junction

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00