Psyllid ID: psy15195

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230--
Protein Sequence
MGSQKDIDGRLSNFVQDSHTTSITNSSGPTSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEcccccccccEEEEEccccEEEEEEEEccccccccccccEEEEEcccccccccccccEEEEEEEccccccccccEEEEcccEEEEEEEcccccccccccccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccHHHHHHHHHHHHHHHHHccccccccccHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccEcccccEEEEEccccccccEEEEEEccccEEEEEEEEccccccccHccEEEEEEEccccccccccccEEEEEEcccccccccccEEEEcccEEEEEEEcccHHccccccccccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHcHHHHHccccccc
Coil and Loop (DISEMBL)
mgsqkdidgrlsnfvqdshttsitnssgptslsvqdlwlkpqavttvsfpdCVKWLtvefdpkcgtcqaedtlqlfipmrpenpsesssYIAVTHKLsngytqwpqytivlpgneVIFTLETasdyvkddrapsygfkcLVTGYewyynpgeglhRLESELSFLGAMCAASLLkkdlilpptgeeldeEWGESLEDLMENVYSKHSQLLSKgfalssipTIHQALDGVLPYR
Flexible Loop (DISEMBL)
mgsqkdidgrlsnFVQDShttsitnssgptslSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETAsdyvkddrapsYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR
Low Complexity Region (SEG)
MGSQKDIDGRLSNFVQDSHTTSITNSSGPTSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTgeeldeewgesledlMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR
Disordered region (IsUnstruct)
*********************************VQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIP***********YIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGE*L**EWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDG*****
Disordered Region (DISOPRED)
*****************************TSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPM**********YIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPT******EW*ESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLP**
Disordered Region (DISEMBL)
********GRLSNFVQDSH*************SVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR
Disordered Region (DISPRO)
********************TSITNSSGPTSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPY*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSQKDIDGRLSNFVQDSHTTSITNSSGPTSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	232	2.2.26 [Sep-21-2011]
Q7TPH6	4711	Probable E3 ubiquitin-pro	yes	N/A	0.823	0.040	0.465	4e-44
O75592	4640	Probable E3 ubiquitin-pro	yes	N/A	0.823	0.041	0.470	5e-44
Q9NB71	5233	E3 ubiquitin-protein liga	yes	N/A	0.672	0.029	0.409	1e-23
Q17551	3766	E3 ubiquitin-protein liga	yes	N/A	0.655	0.040	0.295	2e-12

>sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP2 OS=Mus musculus GN=Mycbp2 PE=1 SV=2

 Score =  177 bits (450), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 95/204 (46%), Positives = 126/204 (61%), Gaps = 13/204 (6%)

Query: 40   KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKL 97
            KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED ++L IP+R    S   + +   H+ 
Sbjct: 1989 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVIRLLIPVRTIQNSGYGAKLTSVHEN 2048

Query: 98   SN---------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             N         G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct: 2049 LNSWVELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2108

Query: 149  NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQL 208
             P EG+ +LE EL+ LG +CAA+L+KKDL LP   E  ++        L   V   HS +
Sbjct: 2109 GPDEGVIQLEKELANLGGVCAAALMKKDLALPVGNELEEDLEILEEAAL--QVCKTHSGI 2166

Query: 209  LSKGFALSSIPTIHQALDGVLPYR 232
            L KG ALS  PTI +AL+G LP +
Sbjct: 2167 LGKGLALSHSPTILEALEGNLPLQ 2190

Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. May have a role during synaptogenesis; candidate for respiratory distress and ventilatory disorders that arise from defective neuronal control of breathing. May function as a facilitator or regulator of transcriptional activation by MYC.
Mus musculus (taxid: 10090)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3

 Score =  177 bits (450), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/204 (47%), Positives = 125/204 (61%), Gaps = 13/204 (6%)

Query: 40   KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKL 97
            KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R    S     +   H+ 
Sbjct: 1992 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 2051

Query: 98   SN---------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             N         G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct: 2052 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2111

Query: 149  NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQL 208
             P EG+ +LE EL+ LG +CAA+L+KKDL LP   E  ++        L   V   HS +
Sbjct: 2112 GPDEGVIQLEKELANLGGVCAAALMKKDLALPIGNELEEDLEILEEAAL--QVCKTHSGI 2169

Query: 209  LSKGFALSSIPTIHQALDGVLPYR 232
            L KG ALS  PTI +AL+G LP +
Sbjct: 2170 LGKGLALSHSPTILEALEGNLPLQ 2193

Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. May function as a facilitator or regulator of transcriptional activation by MYC. May have a role during synaptogenesis.

Homo sapiens (taxid: 9606)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster GN=hiw PE=1 SV=2

 Score =  109 bits (273), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 100/176 (56%), Gaps = 20/176 (11%)

Query: 62   PKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLE 121
            P CG           +P+R ++P++   +I V  K  N  + W    ++LPGN V F+LE
Sbjct: 2620 PGCGNAPGSAAAPSSMPLRSQDPNDRE-WIVV--KKFNTASTWLHNVLILPGNCVEFSLE 2676

Query: 122  TASDYVKDDRAPSYGFKCLVTGYEWYYNP------GEGLHRLESELSFLGAMCAASLLKK 175
            TAS Y +D     YGFKCLV GY+   NP         L RLE EL++LG MC+A+L+KK
Sbjct: 2677 TASLYAQDPHNNRYGFKCLVVGYD---NPTSINASNSCLIRLEQELAYLGGMCSANLMKK 2733

Query: 176  DLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIP-TIHQALDGVLP 230
            +L LP      D++  E +  + E + + H+ LLSKGFALS    T+HQAL+  LP
Sbjct: 2734 ELNLP------DDKDVEDMSGIEETINTHHT-LLSKGFALSEPQLTVHQALESYLP 2782

E3 ubiquitin-protein ligases mediate ubiquitination and subsequent proteasomal degradation of target proteins. Has a role during synaptogenesis; negative regulator of synaptic growth.

Drosophila melanogaster (taxid: 7227)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q17551|RPM1_CAEEL E3 ubiquitin-protein ligase rpm-1 OS=Caenorhabditis elegans GN=rpm-1 PE=1 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 17/169 (10%)

Query: 55   WLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGN 114
            ++ V F P C T Q +D L +++ +      +  SY+ +        ++WP Y ++LPGN
Sbjct: 1790 YICVRFSPDCQTAQFDDQLTIYLKI------DEHSYMPIERCYG---SEWPSYPMILPGN 1840

Query: 115  EVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLK 174
             ++F L+ +S          +G+   VTGY   YN  +   RLE +L +L A  A  ++ 
Sbjct: 1841 CLMFVLDASSAVEGATSEQMFGYHVTVTGYLVGYN--DSTMRLEQDLVWLSAN-ACRIMT 1897

Query: 175  KDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQ 223
            +  I P   E L      + ED   +++ KH  LL KG +LS  PT+ +
Sbjct: 1898 QLPINPSNIEHLS-----TAEDDTRHLFEKHGSLLKKGLSLSHSPTLSE 1941

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins, including dlk-1. Negatively regulates a p38 MAP kinase pathway composed of dlk-1, mkk-4, and pmk-3 that functions presynaptically to regulate synaptic architecture. Has a role during synaptogenesis; regulates neuronal morphology, specifically presynaptic differentiation. May regulate the spatial arrangement of presynaptic terminals or restrict their development.

Caenorhabditis elegans (taxid: 6239)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
383858455	2169	PREDICTED: E3 ubiquitin-protein ligase h	0.939	0.100	0.514	3e-55
307185233	2173	Probable E3 ubiquitin-protein ligase MYC	0.939	0.100	0.510	3e-54
322799994	2032	hypothetical protein SINV_09092 [Solenop	0.939	0.107	0.514	4e-54
307201073	2175	Probable E3 ubiquitin-protein ligase MYC	0.939	0.100	0.531	1e-53
350406403	4570	PREDICTED: probable E3 ubiquitin-protein	0.935	0.047	0.508	3e-53
291223036	4299	PREDICTED: MYC binding protein 2-like, p	0.818	0.044	0.553	3e-53
405977192	5445	Putative E3 ubiquitin-protein ligase MYC	0.823	0.035	0.536	8e-53
380015148	701	PREDICTED: E3 ubiquitin-protein ligase h	0.935	0.309	0.528	9e-53
345484604	4767	PREDICTED: LOW QUALITY PROTEIN: probable	0.978	0.047	0.497	2e-52
340716252	4570	PREDICTED: probable E3 ubiquitin-protein	0.922	0.046	0.510	3e-51

>gi|383858455|ref|XP_003704717.1| PREDICTED: E3 ubiquitin-protein ligase highwire-like [Megachile rotundata]

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/237 (51%), Positives = 153/237 (64%), Gaps = 19/237 (8%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   QDS   S  + S P + S    WL      KP  V+   V+FPD VKWLT+EF P+
Sbjct: 1936 SQISQDSEAQS--HVSPPITTSHHYTWLESDHPYKPSTVSHYKVAFPDTVKWLTIEFTPE 1993

Query: 64   CGTCQAEDTLQLFIPMRPENPSESSS--------YIAVTHKLSNGYTQWPQYTIVLPGNE 115
            CGT Q ED LQL+IP    +   S++        Y  V HKLSN  +QWPQ  IVLPGNE
Sbjct: 1994 CGTAQPEDYLQLYIPNIISSARTSATAGVEDAPLYWPVLHKLSNIQSQWPQNAIVLPGNE 2053

Query: 116  VIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKK 175
            VIF+LETA+ Y+K+DRA  YGFKCLV GY+W  + G GL  LE ELSFLG  CAASL+K+
Sbjct: 2054 VIFSLETATKYMKNDRANMYGFKCLVIGYDWITS-GNGLKNLEIELSFLGGACAASLMKR 2112

Query: 176  DLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR 232
            +L LPP   E  EE  E +++  + ++S HS L ++GFAL+S PT+ QALDGVLP+R
Sbjct: 2113 NLALPPVTNEEVEEDLEQMQETAKRIFSMHSTLFARGFALASPPTVSQALDGVLPFR 2169

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185233|gb|EFN71360.1| Probable E3 ubiquitin-protein ligase MYCBP2 [Camponotus floridanus]

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/239 (51%), Positives = 156/239 (65%), Gaps = 21/239 (8%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   QDS T S  + + P + S    WL      KP  V+   ++FP+ VKWLTVEF P+
Sbjct: 1938 SQISQDSETQS--HFAPPITTSHHYTWLESEHPYKPATVSYYKITFPETVKWLTVEFTPE 1995

Query: 64   CGTCQAEDTLQLFIPMRPENPS----------ESSSYIAVTHKLSNGYTQWPQYTIVLPG 113
            CGT Q ED LQL+IP    N S          ++  Y  V HKLSN  +QWPQ  +VLPG
Sbjct: 1996 CGTSQPEDYLQLYIPNIILNSSAGTIVNITNEDAPLYWPVLHKLSNVQSQWPQNAVVLPG 2055

Query: 114  NEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLL 173
            NEV+F+LETASDY+K++ + +YGFKCLV GY+W  + G GL  LE ELSFLG  CAASL+
Sbjct: 2056 NEVVFSLETASDYMKNESSITYGFKCLVIGYDWITS-GHGLKNLEIELSFLGGACAASLM 2114

Query: 174  KKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR 232
            KK+L+LP    E  EE  ES+++  + ++S HS LL +GFAL+S PT+ QALDGVLPYR
Sbjct: 2115 KKNLLLPSVSLEEVEEDLESMQETAKRIFSVHSALLGRGFALASPPTVSQALDGVLPYR 2173

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322799994|gb|EFZ21111.1| hypothetical protein SINV_09092 [Solenopsis invicta]

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/239 (51%), Positives = 154/239 (64%), Gaps = 21/239 (8%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   QDS T S  + + P + S    WL      KP  V+   V+FP+ VKWLTVEF  +
Sbjct: 1797 SQISQDSETQS--HFAPPITTSHHYTWLESDHPYKPATVSYYKVTFPETVKWLTVEFTSE 1854

Query: 64   CGTCQAEDTLQLFIPMRPENPSESSS----------YIAVTHKLSNGYTQWPQYTIVLPG 113
            CGT Q ED LQL+IP    N S  +           Y  V HKLSN  +QWPQ  +VLPG
Sbjct: 1855 CGTSQPEDYLQLYIPNIIPNSSAGTIPNITGEDTPLYWPVLHKLSNVQSQWPQNAVVLPG 1914

Query: 114  NEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLL 173
            NEVIF+LETASDY+K++ + +YGFKCLV G++W  + G GL  LE ELSFLG  CAASL+
Sbjct: 1915 NEVIFSLETASDYMKNESSITYGFKCLVIGFDWITS-GHGLKNLEIELSFLGGACAASLM 1973

Query: 174  KKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR 232
            KK+L LPP   E  EE  ES+++  + ++S HS LL +GFAL+S PT+ QALDGVLPYR
Sbjct: 1974 KKNLSLPPVSSEEVEEDLESMQETAKRIFSVHSALLGRGFALASPPTVSQALDGVLPYR 2032

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307201073|gb|EFN81005.1| Probable E3 ubiquitin-protein ligase MYCBP2 [Harpegnathos saltator]

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/239 (53%), Positives = 154/239 (64%), Gaps = 21/239 (8%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   QDS T S  + + P + S    WL      KP  V+   V+FP+ VKWLTVEF  +
Sbjct: 1940 SQISQDSETQS--HFAPPVTTSHHYTWLESDHPYKPATVSYYKVTFPETVKWLTVEFTAE 1997

Query: 64   CGTCQAEDTLQLFIPMRPENPSESSS----------YIAVTHKLSNGYTQWPQYTIVLPG 113
            CGT Q ED LQL+IP    N S  S           Y  V HKLSN  +QWPQ  +VLPG
Sbjct: 1998 CGTSQPEDYLQLYIPNVIPNSSAGSVTNAANEDIPLYWPVLHKLSNVQSQWPQNAVVLPG 2057

Query: 114  NEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLL 173
            NEVIF+LETASDYVK++ + +YGFKCLVTGY+W    G GL  LE ELSFLG  CAASL+
Sbjct: 2058 NEVIFSLETASDYVKNESSNTYGFKCLVTGYDWI-TSGHGLKNLEIELSFLGGACAASLM 2116

Query: 174  KKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPYR 232
            KK+L LPP   E  EE  ES+++  + ++S HS LL +GFAL+S PT+ QALDGVLPYR
Sbjct: 2117 KKNLSLPPVSSEEVEEDSESMQETAKRIFSVHSTLLGRGFALASPPTVSQALDGVLPYR 2175

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406403|ref|XP_003487761.1| PREDICTED: probable E3 ubiquitin-protein ligase MYCBP2-like [Bombus impatiens]

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 19/236 (8%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   Q+S   S  ++S P + S    WL      KP  V+   V+FP+ VKWLT+EF P+
Sbjct: 1929 SEISQESEAQS--HASTPITSSHHYTWLESDHPYKPATVSHYRVTFPETVKWLTIEFTPE 1986

Query: 64   CGTCQAEDTLQLFIP--MRPENPSESSS------YIAVTHKLSNGYTQWPQYTIVLPGNE 115
            CGT Q ED LQL+IP  + P      +S      +  V HKLSN  +QWPQ  IVLPGNE
Sbjct: 1987 CGTAQPEDYLQLYIPNIISPSLMGIGTSTEDVPLHWPVLHKLSNIPSQWPQNAIVLPGNE 2046

Query: 116  VIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKK 175
            V+F+LETASDY+++DRA +YGFKCLV GY+W  + G GL  LE ELSFLG  CAASL+K+
Sbjct: 2047 VMFSLETASDYMRNDRAITYGFKCLVIGYDWITS-GNGLKNLEIELSFLGGACAASLMKR 2105

Query: 176  DLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPY 231
            +L+LPP   E  EE  E +++  + ++S HS LL +GFAL+S PT+ QALDGVLP+
Sbjct: 2106 NLLLPPVSHEEVEEDLELMQETAKRIFSVHSTLLGRGFALASPPTVSQALDGVLPF 2161

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291223036|ref|XP_002731521.1| PREDICTED: MYC binding protein 2-like, partial [Saccoglossus kowalevskii]

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/195 (55%), Positives = 139/195 (71%), Gaps = 5/195 (2%)

Query: 40   KPQAVTT--VSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSS--YIAVTH 95
            KP +VT+  VSF + V+W+T+EFDP+CGT Q ED+++L+IP +     +S+    I V  
Sbjct: 1930 KPASVTSYKVSFSEAVQWMTLEFDPQCGTAQPEDSVKLYIPNKSAKDDQSTENPLIPVLK 1989

Query: 96   KLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLH 155
            K   G   WP   ++LPGNEV FTLETASDYVKD++A  YGFKC V GYEW   P EG+ 
Sbjct: 1990 KFYGGL-NWPSMAVILPGNEVHFTLETASDYVKDEKASFYGFKCTVIGYEWVSAPEEGMA 2048

Query: 156  RLESELSFLGAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFAL 215
            +LE ELS+LG MCA+SLLKKDLILPPT  E  EE  ++LE+  + ++S HS LL+K FAL
Sbjct: 2049 QLEKELSYLGGMCASSLLKKDLILPPTTTEEAEEDLDALEETAQQIFSNHSTLLNKAFAL 2108

Query: 216  SSIPTIHQALDGVLP 230
            SS  T+HQALDG +P
Sbjct: 2109 SSPLTVHQALDGNIP 2123

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|405977192|gb|EKC41654.1| Putative E3 ubiquitin-protein ligase MYCBP2 [Crassostrea gigas]

 Score =  212 bits (540), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 110/205 (53%), Positives = 145/205 (70%), Gaps = 14/205 (6%)

Query: 40   KPQAVTT--VSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIP------MRPENPSESSSYI 91
            KP +V+   V FPD VKW+ +EFDP+CGT Q EDTLQL+IP      + P +PSE  S  
Sbjct: 2700 KPASVSNYKVIFPDTVKWMVLEFDPQCGTAQVEDTLQLYIPNIGESDISPTDPSEEGSTS 2759

Query: 92   AVTH----KLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWY 147
               +    K  +G + WP+  IV+PGNEV+F+LETASDYVKD+++  YGFKC+V GYEW 
Sbjct: 2760 TQNYWPIWKKFHGSSNWPKTAIVIPGNEVVFSLETASDYVKDEKSCFYGFKCVVVGYEWN 2819

Query: 148  YNPGEGLHRLESELSFLGAMCAASLLKKDLILPP-TGEELDEEWGESLEDLMENVYSKHS 206
            + P E + +LE ELS+LG MCAASL+KKD+ LPP T EE+DE+  E +E+  + ++  HS
Sbjct: 2820 FTPEESIIQLERELSYLGGMCAASLIKKDVALPPVTVEEIDEDM-EYIEEGSQLIFGAHS 2878

Query: 207  QLLSKGFALSSIPTIHQALDGVLPY 231
            +LL KGFALS  PTI QAL+G LP+
Sbjct: 2879 ELLGKGFALSHPPTIMQALEGNLPF 2903

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|380015148|ref|XP_003691571.1| PREDICTED: E3 ubiquitin-protein ligase highwire-like, partial [Apis florea]

 Score =  212 bits (540), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/225 (52%), Positives = 148/225 (65%), Gaps = 8/225 (3%)

Query: 13  NFVQDSHTTSITNSSGPTSLSVQDLWLKPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAE 70
           N VQ    T +T S   T L   D   KP  V+   V+FP+ VKWLT+EF P+CGT Q E
Sbjct: 479 NEVQPHIPTPVTTSHHYTWLE-SDHPYKPATVSHYRVTFPETVKWLTIEFTPECGTAQPE 537

Query: 71  DTLQLFIPMRPENPSESSSYIA----VTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDY 126
           D LQL+IP         +  I     V HKLSN   QWPQ  IVLPGNEV+F+LETASDY
Sbjct: 538 DYLQLYIPNIISLAGAITEDIPLHWPVLHKLSNIPNQWPQNAIVLPGNEVMFSLETASDY 597

Query: 127 VKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKKDLILPPTGEEL 186
           +++DRA +YGFKCLV GY+W  + G GL  LE ELSFLG  CAASL+K++L LPP   E 
Sbjct: 598 MRNDRAITYGFKCLVIGYDWITS-GNGLKNLEIELSFLGGACAASLMKRNLALPPVSNEE 656

Query: 187 DEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPY 231
            EE  E +++  + ++S HS LL +GFAL+S PT+ QALDGVLP+
Sbjct: 657 VEEDLELMQETAKRIFSVHSTLLGRGFALASPPTVSQALDGVLPF 701

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484604|ref|XP_003425082.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase MYCBP2-like [Nasonia vitripennis]

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/239 (49%), Positives = 149/239 (62%), Gaps = 12/239 (5%)

Query: 4    QKDIDGRLSNFVQDSHTTSITNSSGPTSLSVQDLWLKPQAVT--TVSFPDCVKWLTVEFD 61
            Q+D D          +   +T +S   +    D   KP  V+   V+FP+ VKWLT+EF 
Sbjct: 2011 QQDNDATTQQMAVAHYIPPVTTTSHYCTWLESDHPYKPATVSYYRVTFPETVKWLTLEFT 2070

Query: 62   PKCGTCQAEDTLQLFIP-------MRPE--NPSESSSYIAVTHKLSNGYTQWPQYTIVLP 112
            P CGT Q ED LQL+IP         PE  N  ES  Y  V HKLSN  +QWPQ  +VLP
Sbjct: 2071 PDCGTAQPEDYLQLYIPNVDGSFAKSPESCNLEESPVYWPVLHKLSNVQSQWPQNAVVLP 2130

Query: 113  GNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASL 172
            GNEVIF+LETASDY+KD+R+ +YGFKCLV GY+W  +   GL  LE ELSFLG  CAASL
Sbjct: 2131 GNEVIFSLETASDYMKDERSITYGFKCLVIGYDW-ISTSSGLKNLEIELSFLGGACAASL 2189

Query: 173  LKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPY 231
            +KK+L LP    E  EE  E  +   + ++S HS LL +GFAL++ PT+ QALDGVLP+
Sbjct: 2190 MKKNLSLPLVSTEEAEEDSEQAQATAKRIFSVHSTLLGRGFALAAPPTVGQALDGVLPF 2248

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716252|ref|XP_003396613.1| PREDICTED: probable E3 ubiquitin-protein ligase MYCBP2-like [Bombus terrestris]

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/239 (51%), Positives = 154/239 (64%), Gaps = 25/239 (10%)

Query: 12   SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT--TVSFPDCVKWLTVEFDPK 63
            S   Q+S   S  + S P + S    WL      KP  V+   V+FP+ VKWLT+EF P+
Sbjct: 1929 SEISQESEAQS--HVSTPITSSHHYTWLESDHPYKPATVSHYRVTFPETVKWLTIEFTPE 1986

Query: 64   CGTCQAEDTLQLFIP--MRPENPSESSS------YIAVTHKLSNGYTQWPQYTIVLPGNE 115
            CGT Q ED LQL+IP  + P      +S      +  V  KLSN  +QWPQ  IVLPGNE
Sbjct: 1987 CGTAQPEDYLQLYIPNIISPSLMGIGTSTEDVPLHWPVLRKLSNVPSQWPQNAIVLPGNE 2046

Query: 116  VIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFLGAMCAASLLKK 175
            V+F+LETASDY+++DRA +YGFKCLV GY+W  + G GL  LE ELSFLG  CAASL+K+
Sbjct: 2047 VMFSLETASDYMRNDRAVTYGFKCLVIGYDWITS-GNGLKNLEIELSFLGGACAASLMKR 2105

Query: 176  DLILPPTGEELDEEWGESLEDLME---NVYSKHSQLLSKGFALSSIPTIHQALDGVLPY 231
            +L LPP     +EE GE LE + E    ++S HS LL +GFAL+S PT+ QALDGVLP+
Sbjct: 2106 NLPLPPVS---NEEVGEDLELMQETAKRIFSVHSTLLGRGFALASPPTVSQALDGVLPF 2161

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	232
ZFIN|ZDB-GENE-030616-132	4648	mycbp2 "MYC binding protein 2"	0.771	0.038	0.507	6.9e-41
UNIPROTKB|E1BH40	4640	MYCBP2 "Uncharacterized protei	0.814	0.040	0.470	4.4e-39
MGI|MGI:2179432	4711	Mycbp2 "MYC binding protein 2"	0.814	0.040	0.460	4.5e-39
UNIPROTKB|F1RP77	4460	MYCBP2 "Uncharacterized protei	0.814	0.042	0.465	5.4e-39
UNIPROTKB|F1PB36	4640	MYCBP2 "Uncharacterized protei	0.814	0.040	0.465	5.6e-39
UNIPROTKB|O75592	4640	MYCBP2 "Probable E3 ubiquitin-	0.814	0.040	0.465	5.6e-39
UNIPROTKB|J3KPZ3	4678	MYCBP2 "Probable E3 ubiquitin-	0.814	0.040	0.465	5.7e-39
UNIPROTKB|J9PB77	4727	MYCBP2 "Uncharacterized protei	0.814	0.039	0.465	5.7e-39
RGD|1312048	2667	Mycbp2 "MYC binding protein 2,	0.810	0.070	0.447	2e-38
UNIPROTKB|D4A2D3	4715	Mycbp2 "Protein Mycbp2" [Rattu	0.814	0.040	0.450	3.2e-38

ZFIN|ZDB-GENE-030616-132 mycbp2 "MYC binding protein 2" [Danio rerio (taxid:7955)]

 Score = 454 (164.9 bits), Expect = 6.9e-41, P = 6.9e-41
 Identities = 99/195 (50%), Positives = 127/195 (65%)

Query:    47 VSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQ--- 103
             VSFPDCV+W+TVEFDP+CGT Q ED L+L IP R  + S  SS  A+ H+  N +T+   
Sbjct:  2026 VSFPDCVRWMTVEFDPQCGTAQPEDVLRLLIPSRSLHFSGLSSK-ALAHETINSWTELKK 2084

Query:   104 ------WPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPG--EGLH 155
                   WP   +VLPGNE +F+LETASDYVKD++A  YGFKC+  GYE  +NPG  EG+ 
Sbjct:  2085 FSGSSGWPTAVLVLPGNEALFSLETASDYVKDEKASFYGFKCVAVGYE--FNPGLDEGII 2142

Query:   156 RLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQLLSKGFAL 215
             +LE EL++LG++CAA+L+KKDL LP                 ++ V   HS LL KG AL
Sbjct:  2143 QLEKELAYLGSVCAAALMKKDLALP-IGNELEEDLEILEEASLQ-VCKSHSGLLGKGLAL 2200

Query:   216 SSIPTIHQALDGVLP 230
             S  PTI +AL+G LP
Sbjct:  2201 SHSPTILEALEGNLP 2215

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0021986 "habenula development" evidence=IMP

GO:0016198 "axon choice point recognition" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0007411 "axon guidance" evidence=IMP

GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP

GO:0046872 "metal ion binding" evidence=IEA

GO:0042068 "regulation of pteridine metabolic process" evidence=IMP

UNIPROTKB|E1BH40 MYCBP2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 437 (158.9 bits), Expect = 4.4e-39, P = 4.4e-39
 Identities = 95/202 (47%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        AV   
Sbjct:  1992 KPACVMHYKVTFPECVRWMTLEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTAVHEN 2051

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2052 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2111

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2112 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2169

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2170 LGKGLALSHSPTILEALEGNLP 2191

GO:0051493 "regulation of cytoskeleton organization" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IEA

GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

MGI|MGI:2179432 Mycbp2 "MYC binding protein 2" [Mus musculus (taxid:10090)]

 Score = 437 (158.9 bits), Expect = 4.5e-39, P = 4.5e-39
 Identities = 93/202 (46%), Positives = 125/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED ++L IP+R  +N    +   +V   
Sbjct:  1989 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVIRLLIPVRTIQNSGYGAKLTSVHEN 2048

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2049 LNSWVELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2108

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2109 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-VGNELEEDLEILEEAALQ-VCKTHSGI 2166

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2167 LGKGLALSHSPTILEALEGNLP 2188

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IDA

GO:0016874 "ligase activity" evidence=IEA

GO:0021785 "branchiomotor neuron axon guidance" evidence=IMP

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IMP

GO:0030424 "axon" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046872 "metal ion binding" evidence=IEA

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=IMP

GO:0051493 "regulation of cytoskeleton organization" evidence=IMP

UNIPROTKB|F1RP77 MYCBP2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 436 (158.5 bits), Expect = 5.4e-39, P = 5.4e-39
 Identities = 94/202 (46%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        +V   
Sbjct:  1905 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 1964

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  1965 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2024

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2025 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2082

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2083 LGKGLALSHSPTILEALEGNLP 2104

GO:0051493 "regulation of cytoskeleton organization" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IEA

GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|F1PB36 MYCBP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 436 (158.5 bits), Expect = 5.6e-39, P = 5.6e-39
 Identities = 94/202 (46%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        +V   
Sbjct:  1992 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 2051

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2052 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2111

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2112 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2169

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2170 LGKGLALSHSPTILEALEGNLP 2191

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

UNIPROTKB|O75592 MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2" [Homo sapiens (taxid:9606)]

 Score = 436 (158.5 bits), Expect = 5.6e-39, P = 5.6e-39
 Identities = 94/202 (46%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        +V   
Sbjct:  1992 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 2051

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2052 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2111

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2112 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2169

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2170 LGKGLALSHSPTILEALEGNLP 2191

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0015630 "microtubule cytoskeleton" evidence=IEA

GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0032880 "regulation of protein localization" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051493 "regulation of cytoskeleton organization" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|J3KPZ3 MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2" [Homo sapiens (taxid:9606)]

 Score = 436 (158.5 bits), Expect = 5.7e-39, P = 5.7e-39
 Identities = 94/202 (46%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        +V   
Sbjct:  2030 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 2089

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2090 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2149

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2150 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2207

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2208 LGKGLALSHSPTILEALEGNLP 2229

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|J9PB77 MYCBP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 436 (158.5 bits), Expect = 5.7e-39, P = 5.7e-39
 Identities = 94/202 (46%), Positives = 124/202 (61%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRP-ENPSESSSYIAVTHK 96
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L IP+R  +N        +V   
Sbjct:  2030 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLIPVRTVQNSGYGPKLTSVHEN 2089

Query:    97 LSN--------GYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
             L++        G + WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2090 LNSWIELKKFSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2149

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2150 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2207

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2208 LGKGLALSHSPTILEALEGNLP 2229

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

RGD|1312048 Mycbp2 "MYC binding protein 2, E3 ubiquitin protein ligase" [Rattus norvegicus (taxid:10116)]

 Score = 428 (155.7 bits), Expect = 2.0e-38, P = 2.0e-38
 Identities = 89/199 (44%), Positives = 120/199 (60%)

Query:    41 PQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNG 100
             P     V+FP+CV+W+T+EFDP+CGT Q+ED L+L  P+R    +   + +   H+  N 
Sbjct:  1973 PLVYWQVTFPECVRWMTIEFDPQCGTAQSEDVLRLLTPVRTIQNAGYGAKVTSAHENLNS 2032

Query:   101 YTQ---------WPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPG 151
             + +         WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+   P 
Sbjct:  2033 WIELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSPGPD 2092

Query:   152 EGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQLLSK 211
             EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +L K
Sbjct:  2093 EGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGILGK 2150

Query:   212 GFALSSIPTIHQALDGVLP 230
             G ALS  PTI +AL+G LP
Sbjct:  2151 GLALSHSPTILEALEGNLP 2169

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008045 "motor neuron axon guidance" evidence=ISO

GO:0015630 "microtubule cytoskeleton" evidence=ISO

GO:0021785 "branchiomotor neuron axon guidance" evidence=ISO

GO:0021952 "central nervous system projection neuron axonogenesis" evidence=ISO

GO:0030424 "axon" evidence=ISO

GO:0032880 "regulation of protein localization" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0048667 "cell morphogenesis involved in neuron differentiation" evidence=ISO

GO:0051493 "regulation of cytoskeleton organization" evidence=ISO

UNIPROTKB|D4A2D3 Mycbp2 "Protein Mycbp2" [Rattus norvegicus (taxid:10116)]

 Score = 429 (156.1 bits), Expect = 3.2e-38, P = 3.2e-38
 Identities = 91/202 (45%), Positives = 122/202 (60%)

Query:    40 KPQAVT--TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKL 97
             KP  V    V+FP+CV+W+T+EFDP+CGT Q+ED L+L  P+R    +   + +   H+ 
Sbjct:  1989 KPACVMHYKVTFPECVRWMTIEFDPQCGTAQSEDVLRLLTPVRTIQNAGYGAKVTSAHEN 2048

Query:    98 SNGYTQ---------WPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYY 148
              N + +         WP   +VLPGNE +F+LETASDYVKDD+A  YGFKC   GYE+  
Sbjct:  2049 LNSWIELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKASFYGFKCFAIGYEFSP 2108

Query:   149 NPGEGLHRLESELSFLGAMCAASLLKKDLILPPTXXXXXXXXXXXXXXXMENVYSKHSQL 208
              P EG+ +LE EL+ LG +CAA+L+KKDL LP                 ++ V   HS +
Sbjct:  2109 GPDEGVIQLEKELANLGGVCAAALMKKDLALP-IGNELEEDLEILEEAALQ-VCKTHSGI 2166

Query:   209 LSKGFALSSIPTIHQALDGVLP 230
             L KG ALS  PTI +AL+G LP
Sbjct:  2167 LGKGLALSHSPTILEALEGNLP 2188

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	232
KOG1428|consensus	3738		100.0
PF00431	110	CUB: CUB domain CUB domain entry Spermadhesins fam	82.04

>KOG1428|consensus

Probab=100.00  E-value=6.4e-54  Score=439.06  Aligned_cols=196  Identities=27%  Similarity=0.479  Sum_probs=183.1

Q ss_pred             CcccccccccccCCCCCCCccccceeEe------ecceeE-EEecCCcceEEEEEecCCcccccccceEEEeecCCCCCC
Q psy15195         12 SNFVQDSHTTSITNSSGPTSLSVQDLWL------KPQAVT-TVSFPDCVKWLTVEFDPKCGTCQAEDTLQLFIPMRPENP   84 (232)
Q Consensus        12 ~~~~~~s~~~~~~~~~~~~ttS~hy~~v------k~atv~-~V~FP~~V~wm~leFDprc~TaQ~eD~L~Iyip~~~~~~   84 (232)
                      +++|+||       +.++++++-||++|      |||+.+ +|.||++|+||||||||+|+|||.||+|+||+|.|.++ 
T Consensus      1744 ~~dS~DS-------G~dt~~s~~~~tVvESqHPYKP~t~~~~V~~~E~a~~i~v~FsPdC~TAQ~dD~L~i~l~i~~~S- 1815 (3738)
T KOG1428|consen 1744 SYDSDDS-------GCDTPYSGIVTTVVESQHPYKPNTSSSMVLLFEEADYICVRFSPDCQTAQFDDQLTIYLKIDEHS- 1815 (3738)
T ss_pred             CCCCCCC-------CcCCccccceEEEeeccCCCCCcccceeeeecccccEEEEEeCCCcCcccccceEEEEEEecccc-
Confidence            6777777       77888999999999      899888 99999999999999999999999999999999998764 


Q ss_pred             CCCCccceeecccCCCCCCCCCceeEecCCeEEEEEEccccccCCCCCCccceeEEEEEeeecCCCCchhHHHHHHHHHH
Q psy15195         85 SESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCLVTGYEWYYNPGEGLHRLESELSFL  164 (232)
Q Consensus        85 ~~t~~y~pv~~~f~~~~s~WP~~~lllPGN~v~FsLETAS~y~~~~~~~~yGFkC~ViGYe~~~~~~~~L~~LE~ELs~L  164 (232)
                           |+|+.|+||+   +||.++|||||||++|+||++|+|+++++++||||.|+|+||+..+  +++.++|||||+||
T Consensus      1816 -----~m~ier~~GS---~WPs~~miLPGN~~mF~LdasS~~~~~~seq~fGy~~~v~GY~~G~--nd~tmrLEqdLv~L 1885 (3738)
T KOG1428|consen 1816 -----YMPIERCYGS---EWPSYPMILPGNCLMFVLDASSAVEGATSEQMFGYHVTVTGYLVGY--NDSTMRLEQDLVWL 1885 (3738)
T ss_pred             -----ceeehhccCC---CCCcceEEecCceEEEEEecchhhhccchhhhcceEEEEEEEEecC--CcchhHHHHHHHHh
Confidence                 9999877774   9999999999999999999999999999999999999999999974  99999999999998


Q ss_pred             HHHHHHHhhhhhcCCCCCCCCcccccccchHHHHHHHHHhhhhhhhhcccCCCcchHHHHhcCCCCC
Q psy15195        165 GAMCAASLLKKDLILPPTGEELDEEWGESLEDLMENVYSKHSQLLSKGFALSSIPTIHQALDGVLPY  231 (232)
Q Consensus       165 ga~cAa~Llk~dl~lP~~~~~~~~e~l~~~ee~a~~i~~~h~sLL~KGl~ls~~pTi~eal~~~lP~  231 (232)
                      +|    ++||+++|||+.++  ++|+++++||+|++++++|++||+|||+|||+|||.|+|+++||.
T Consensus      1886 ~A----~~~r~~~qLPI~~s--~~E~Ls~~Ed~t~hl~ekH~~lL~KGLsLSHSPTl~E~~t~~~P~ 1946 (3738)
T KOG1428|consen 1886 SA----NACRIMTQLPINPS--NIEHLSTAEDDTRHLFEKHGSLLKKGLSLSHSPTLSELCTKGQPP 1946 (3738)
T ss_pred             hH----HHHHHHhcCCCCch--hHHHHHhhHHHHHHHHHhcchhhhcccccccCchHHHHHhCCCCC
Confidence            85    47788899998655  789999999999999999999999999999999999999999996

>PF00431 CUB: CUB domain CUB domain entry Spermadhesins family entry Link to schematic domain picture by Peer Bork

Probab=82.04  E-value=17  Score=26.32  Aligned_cols=71  Identities=15%  Similarity=0.302  Sum_probs=43.3

Q ss_pred             ceEEEEEecCCcccccccceEEEeecCCCCCCCCCCccceeecccCCCCCCCCCceeEecCCeEEEEEEccccccCCCCC
Q psy15195         53 VKWLTVEFDPKCGTCQAEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRA  132 (232)
Q Consensus        53 V~wm~leFDprc~TaQ~eD~L~Iyip~~~~~~~~t~~y~pv~~~f~~~~s~WP~~~lllPGN~v~FsLETAS~y~~~~~~  132 (232)
                      |+.-..+||-++...-..|.|.||-..+..        .+.+.+|-+  ...|. .++..+|.|++.|.+.      ...
T Consensus        39 I~l~f~~~~~~~~~~c~~d~l~v~~g~~~~--------~~~~~~~cg--~~~~~-~i~s~~~~l~i~f~s~------~~~  101 (110)
T PF00431_consen   39 IRLTFLSFDLESSDSCCQDYLEVYDGNDES--------SPLLGRFCG--SSPPP-SIISSSNSLFIRFHSD------SSN  101 (110)
T ss_dssp             EEEEEEEEEB--TTTSTSSEEEEESSSSTT--------SEEEEEESS--SSCCE-EEEESSSEEEEEEEES------SSS
T ss_pred             eeeccccccceeeeeecccceeEEeecccc--------ceeeeeccC--CcCCc-cEEECCCEEEEEEEEC------CCC
Confidence            333334555553333346999999666432        234445544  35564 5789999999999986      344


Q ss_pred             CccceeEE
Q psy15195        133 PSYGFKCL  140 (232)
Q Consensus       133 ~~yGFkC~  140 (232)
                      +..||+.+
T Consensus       102 ~~~gF~~~  109 (110)
T PF00431_consen  102 SSRGFKAT  109 (110)
T ss_dssp             TTSEEEEE
T ss_pred             CCccEEEE
Confidence            56788753

; InterPro: IPR000859 The CUB domain (for complement C1r/C1s, Uegf, Bmp1) is a structural motif of approximately 110 residues found almost exclusively in extracellular and plasma membrane-associated proteins, many of which are developmentally regulated [, ]. These proteins are involved in a diverse range of functions, including complement activation, developmental patterning, tissue repair, axon guidance and angiogenesis, cell signalling, fertilisation, haemostasis, inflammation, neurotransmission, receptor-mediated endocytosis, and tumour suppression [, ]. Many CUB-containing proteins are peptidases belonging to MEROPS peptidase families M12A (astacin) and S1A (chymotrypsin). Proteins containing a CUB domain include: Mammalian complement subcomponents C1s/C1r, which form the calcium-dependent complex C1, the first component of the classical pathway of the complement system. Cricetidae sp. (Hamster) serine protease Casp, which degrades type I and IV collagen and fibronectin in the presence of calcium. Mammalian complement-activating component of Ra-reactive factor (RARF), a protease that cleaves the C4 component of complement. Vertebrate enteropeptidase (3.4.21.9 from EC), a type II membrane protein of the intestinal brush border, which activates trypsinogen. Vertebrate bone morphogenic protein 1 (BMP-1), a protein which induces cartilage and bone formation and expresses metalloendopeptidase activity. Sea urchin blastula proteins BP10 and SpAN. Caenorhabditis elegans hypothetical proteins F42A10.8 and R151.5. Neuropilin (A5 antigen), a calcium-independent cell adhesion molecule that functions during the formation of certain neuronal circuits. Fibropellins I and III from Strongylocentrotus purpuratus (Purple sea urchin). Mammalian hyaluronate-binding protein TSG-6 (or PS4), a serum and growth factor induced protein. Mammalian spermadhesins. Xenopus laevis embryonic protein UVS.2, which is expressed during dorsoanterior development. Several of the above proteins consist of a catalytic domain together with several CUB domains interspersed by calcium-binding EGF domains. Some CUB domains appear to be involved in oligomerisation and/or recognition of substrates and binding partners. For example, in the complement proteases, the CUB domains mediate dimerisation and binding to collagen-like regions of target proteins (e.g. C1q for C1r/C1s). The structure of CUB domains consists of a beta-sandwich with a jelly-roll fold. Almost all CUB domains contain four conserved cysteines that probably form two disulphide bridges (C1-C2, C3-C4). The CUB1 domains of C1s and Map19 have calcium-binding sites [].; PDB: 1SFP_A 3KQ4_B 2WNO_A 2QQK_A 2QQL_A 2QQO_B 2QQM_A 3POJ_A 3POB_A 3POG_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	232
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 4e-06
 Identities = 39/256 (15%), Positives = 70/256 (27%), Gaps = 89/256 (34%)

Query: 27  SGPTSLSVQDLWLKPQAVTTVSFPDCVKWLTVEFDPKCGTCQAEDTL-----QLFIPMRP 81
           SG T +++         V        + WL +        C + +T+     +L   + P
Sbjct: 161 SGKTWVALDVC--LSYKVQCK-MDFKIFWLNL------KNCNSPETVLEMLQKLLYQIDP 211

Query: 82  ---ENPSESSSYIAVTHKLSNG---YTQWPQYT---IVLPGNEVIFTLETASDYVKDDR- 131
                   SS+     H +        +   Y    +VL               V++ + 
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-------------LNVQNAKA 258

Query: 132 APSYGFKC--LVT-----------GYEWYY----NPGEGLHRLESE---LSFLG------ 165
             ++   C  L+T                +    +    L   E +   L +L       
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318

Query: 166 --AMCAASLLKKDLILPPTGEELDEE---WGE---------------SLEDLMENVYSKH 205
              +   +  +  +I     E + +    W                 SL  L    Y K 
Sbjct: 319 PREVLTTNPRRLSII----AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

Query: 206 SQLLSKGFALSS-IPT 220
              LS  F  S+ IPT
Sbjct: 375 FDRLSV-FPPSAHIPT 389

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	232
d2qqma3	108	Mannose-binding protein associated serine protease	86.57

>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: CUB-like
superfamily: Spermadhesin, CUB domain
family: Spermadhesin, CUB domain
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.57  E-value=3.2  Score=27.77  Aligned_cols=55  Identities=15%  Similarity=0.103  Sum_probs=37.8

Q ss_pred             ccceEEEeecCCCCCCCCCCccceeecccCCCCCCCCCceeEecCCeEEEEEEccccccCCCCCCccceeEE
Q psy15195         69 AEDTLQLFIPMRPENPSESSSYIAVTHKLSNGYTQWPQYTIVLPGNEVIFTLETASDYVKDDRAPSYGFKCL  140 (232)
Q Consensus        69 ~eD~L~Iyip~~~~~~~~t~~y~pv~~~f~~~~s~WP~~~lllPGN~v~FsLETAS~y~~~~~~~~yGFkC~  140 (232)
                      ..|.|.||-.....        .+.+.+|-+  ...|. .++-.||.|++.|-|..      ..+.-||+..
T Consensus        52 ~~D~l~i~dg~~~~--------~~~~~~~Cg--~~~p~-~~~S~~n~l~i~F~Sd~------~~~~~GF~~~  106 (108)
T d2qqma3          52 RYDRLEIWDGFPDV--------GPHIGRYCG--QKTPG-RIRSSSGILSMVFYTDS------AIAKEGFSAN  106 (108)
T ss_dssp             CSSEEEEESSSTTT--------SCEEEEECT--TCCCC-EEEECSSEEEEEEECCS------SCCCCEEEEE
T ss_pred             cccEEEEEeccccC--------CccccEEee--ccCCC-CEEEcCCEEEEEEEECC------CCCCCCEEEE
Confidence            45999999765322        244556654  47785 68999999999998742      2234588875