Psyllid ID: psy15440

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------8
Protein Sequence
MQISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYEDEEKGSIEEKKDL
Secondary Structure (PSIPRED)
cccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHEEcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MQISRRDASRAFAtftvtpgkdeyddlsdlnpaewESVREWEEQLDSKYTYIGKllkpgeshinyedeekgsieekkdl
Flexible Loop (DISEMBL)
mqisrrdasrafatftvtpgkdeyddlsDLNPAEWESVREWEEQLDSKYTYIGKllkpgeshinyedeekgsieekkdl
Low Complexity Region (SEG)
MQISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYEDEEKGSIEEKKDL
Disordered region (IsUnstruct)
*********************************EWESVREWEEQLDSKYTYIGKLLK**********************
Disordered Region (DISOPRED)
MQISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL***********************
Disordered Region (DISEMBL)
********SRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYE*************
Disordered Region (DISPRO)
*************TFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKP*********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYEDEEKGSIEEKKDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	79	2.2.26 [Sep-21-2011]
O15173	223	Membrane-associated proge	yes	N/A	0.962	0.340	0.538	1e-14
Q5XIU9	217	Membrane-associated proge	yes	N/A	0.962	0.350	0.538	1e-14
Q80UU9	217	Membrane-associated proge	yes	N/A	0.962	0.350	0.538	1e-14
Q95250	194	Membrane-associated proge	no	N/A	0.848	0.345	0.521	9e-12
Q5ZKN2	192	Membrane-associated proge	no	N/A	0.949	0.390	0.467	1e-11
P70580	195	Membrane-associated proge	no	N/A	0.848	0.343	0.507	2e-11
O55022	195	Membrane-associated proge	no	N/A	0.848	0.343	0.507	3e-11
Q17QC0	194	Membrane-associated proge	no	N/A	0.848	0.345	0.507	3e-11
Q5RED0	195	Membrane-associated proge	no	N/A	0.848	0.343	0.521	4e-11
O00264	195	Membrane-associated proge	no	N/A	0.848	0.343	0.521	5e-11

>sp|O15173|PGRC2_HUMAN Membrane-associated progesterone receptor component 2 OS=Homo sapiens GN=PGRMC2 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 3   ISRRDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE
Sbjct: 146 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 205

Query: 61  SHINYEDEEKGSIEEKKD 78
               Y DEE      K+D
Sbjct: 206 EPSEYTDEEDTKDHNKQD 223

Receptor for steroids.
Homo sapiens (taxid: 9606)

>sp|Q5XIU9|PGRC2_RAT Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus GN=Pgrmc2 PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE
Sbjct: 140 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 199

Query: 61  SHINYEDEEKGSIEEKKD 78
               Y DEE      K+D
Sbjct: 200 EPSEYTDEEDTKDHSKQD 217

Receptor for steroids.

Rattus norvegicus (taxid: 10116)

>sp|Q80UU9|PGRC2_MOUSE Membrane-associated progesterone receptor component 2 OS=Mus musculus GN=Pgrmc2 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 2/78 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE
Sbjct: 140 FAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGE 199

Query: 61  SHINYEDEEKGSIEEKKD 78
               Y DEE      K+D
Sbjct: 200 EPSEYTDEEDTKDHSKQD 217

Receptor for steroids.

Mus musculus (taxid: 10090)

>sp|Q95250|PGRC1_PIG Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL PA+ E++ +W+ Q   KY ++GKLLK GE
Sbjct: 115 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGE 174

Query: 61  SHINYEDEE 69
               Y DEE
Sbjct: 175 EPTVYSDEE 183

Receptor for progesterone.

Sus scrofa (taxid: 9823)

>sp|Q5ZKN2|PGRC1_CHICK Membrane-associated progesterone receptor component 1 OS=Gallus gallus GN=PGRMC1 PE=2 SV=3

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     +D+YDDLSDLN  + E++R+WE Q   KY ++GKLLK GE
Sbjct: 114 FAGRDASRGLATFCLDKEALRDDYDDLSDLNATQQETLRDWESQFTFKYHHVGKLLKDGE 173

Query: 61  SHINYEDEEKGSIEEKK 77
               Y DEE+   ++ K
Sbjct: 174 EPTVYSDEEEKDAQDAK 190

Receptor for progesterone.

Gallus gallus (taxid: 9031)

>sp|P70580|PGRC1_RAT Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL PA+ E++ +W+ Q   KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGE 175

Query: 61  SHINYEDEE 69
               Y D+E
Sbjct: 176 EPTVYSDDE 184

Receptor for progesterone (By similarity). May be implicated in 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) immunotoxicity.

Rattus norvegicus (taxid: 10116)

>sp|O55022|PGRC1_MOUSE Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL PA+ E++ +W+ Q   KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGE 175

Query: 61  SHINYEDEE 69
               Y D+E
Sbjct: 176 EPTVYSDDE 184

Receptor for progesterone.

Mus musculus (taxid: 10090)

>sp|Q17QC0|PGRC1_BOVIN Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL PA+ E++ +W+ Q   KY ++GKLLK GE
Sbjct: 115 FAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKDGE 174

Query: 61  SHINYEDEE 69
               Y D+E
Sbjct: 175 EPTVYSDKE 183

Receptor for progesterone.

Bos taurus (taxid: 9913)

>sp|Q5RED0|PGRC1_PONAB Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL  A+ E++ +WE Q   KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGE 175

Query: 61  SHINYEDEE 69
               Y DEE
Sbjct: 176 EPTVYSDEE 184

Receptor for progesterone.

Pongo abelii (taxid: 9601)

>sp|O00264|PGRC1_HUMAN Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 2/69 (2%)

Query: 3   ISRRDASRAFATFTVT--PGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGE 60
            + RDASR  ATF +     KDEYDDLSDL  A+ E++ +WE Q   KY ++GKLLK GE
Sbjct: 116 FAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGE 175

Query: 61  SHINYEDEE 69
               Y DEE
Sbjct: 176 EPTVYSDEE 184

Receptor for progesterone.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
156544530	195	PREDICTED: membrane-associated progester	0.784	0.317	0.677	2e-17
332372710	186	unknown [Dendroctonus ponderosae]	0.898	0.381	0.633	9e-17
307172989	216	Membrane-associated progesterone recepto	0.886	0.324	0.605	1e-15
322796273	206	hypothetical protein SINV_80278 [Solenop	0.886	0.339	0.619	1e-15
307199282	218	Membrane-associated progesterone recepto	0.886	0.321	0.619	2e-15
332029302	220	Membrane-associated progesterone recepto	0.810	0.290	0.625	2e-15
91081249	189	PREDICTED: similar to AGAP000767-PA [Tri	0.810	0.338	0.640	2e-15
346469355	210	hypothetical protein [Amblyomma maculatu	0.911	0.342	0.613	3e-15
427786965	215	Putative steroid membrane receptor [Rhip	0.835	0.306	0.636	3e-15
274315753	263	membrane steroid binding protein [Acyrth	0.797	0.239	0.671	4e-15

>gi|156544530|ref|XP_001607638.1| PREDICTED: membrane-associated progesterone receptor component 2-like [Nasonia vitripennis]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 48/62 (77%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASR  ATF+V PGKD+YDDLSDLN  E  SV+EWEEQ   +Y Y+GKLLKPGE+  NY
Sbjct: 117 RDASRGLATFSVVPGKDDYDDLSDLNTDEMNSVKEWEEQFKERYDYVGKLLKPGEAPTNY 176

Query: 66  ED 67
            D
Sbjct: 177 SD 178

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332372710|gb|AEE61497.1| unknown [Dendroctonus ponderosae]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 51/71 (71%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASR  ATF VT G D+YDDLSDL+  E +SVREWE Q + KY Y+G+LLKPGE   NY
Sbjct: 112 RDASRGLATFNVTAGGDQYDDLSDLSTLEMDSVREWETQFNEKYDYVGRLLKPGEQPNNY 171

Query: 66  EDEEKGSIEEK 76
            DEE  S  EK
Sbjct: 172 SDEEDESNTEK 182

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172989|gb|EFN64131.1| Membrane-associated progesterone receptor component 2 [Camponotus floridanus]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASRA A F V    D+YDDLSDLN  E  S++EWEEQ   +Y Y+GKLLKPGE+  NY
Sbjct: 120 RDASRALARFAVDAATDKYDDLSDLNTTEMNSIKEWEEQFKERYDYVGKLLKPGEAPTNY 179

Query: 66  EDEE-KGSIEE 75
            DEE +GS +E
Sbjct: 180 SDEEDEGSQQE 190

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322796273|gb|EFZ18849.1| hypothetical protein SINV_80278 [Solenopsis invicta]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASRA A F V    D+YDDLSDLN  E  S++EWEEQ   +Y YIGKLLKPGE+  NY
Sbjct: 125 RDASRALARFAVDAATDKYDDLSDLNTTEMNSIKEWEEQFKERYDYIGKLLKPGEAPTNY 184

Query: 66  EDEE-KGSIEE 75
            DEE +GS +E
Sbjct: 185 SDEEDEGSQQE 195

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307199282|gb|EFN79935.1| Membrane-associated progesterone receptor component 2 [Harpegnathos saltator]

 Score = 86.7 bits (213), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASRA A F V    D+YDDLSDLN AE  SV EWEEQ   +Y ++GKLLKPGE+  NY
Sbjct: 122 RDASRALARFAVDAATDKYDDLSDLNTAEMNSVNEWEEQFKERYDHVGKLLKPGEAPTNY 181

Query: 66  EDEE-KGSIEE 75
            DEE +GS +E
Sbjct: 182 SDEEDEGSQQE 192

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332029302|gb|EGI69285.1| Membrane-associated progesterone receptor component 2 [Acromyrmex echinatior]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASRA A F V    D+YDDLSDLN  E  S++EWEEQ   +Y Y+GKLLKPGE+  NY
Sbjct: 124 RDASRALARFEVASATDKYDDLSDLNTTEMNSIKEWEEQFKERYDYVGKLLKPGEAPTNY 183

Query: 66  EDEE 69
            DEE
Sbjct: 184 SDEE 187

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91081249|ref|XP_975650.1| PREDICTED: similar to AGAP000767-PA [Tribolium castaneum] gi|270006068|gb|EFA02516.1| hypothetical protein TcasGA2_TC008221 [Tribolium castaneum]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
           RDASR  ATF+V+   DEYDDLSDLN  E +SVREWE Q   KY  +GKLLKPGE   NY
Sbjct: 111 RDASRGLATFSVSAKTDEYDDLSDLNSMEMDSVREWEAQFKEKYDLVGKLLKPGEQPTNY 170

Query: 66  EDEE 69
            D+E
Sbjct: 171 SDDE 174

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346469355|gb|AEO34522.1| hypothetical protein [Amblyomma maculatum]

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 3/75 (4%)

Query: 7   DASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYE 66
           DASR  ATF+V   K+ YDDLSDLNP E ESVREWE Q   KY Y+G+LLKPGE   +Y 
Sbjct: 121 DASRGLATFSVERPKEGYDDLSDLNPMEMESVREWEMQFTEKYHYVGRLLKPGEEPTDYS 180

Query: 67  DEEKGSIEE---KKD 78
           DEE+ S  E   KKD
Sbjct: 181 DEEEPSATEPAAKKD 195

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427786965|gb|JAA58934.1| Putative steroid membrane receptor [Rhipicephalus pulchellus]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 48/66 (72%)

Query: 7   DASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYE 66
           DASR  ATF+V   KD YDDLSDLNP E ESVREWE Q   KY Y+G+LLKPGE   +Y 
Sbjct: 123 DASRGLATFSVERPKDGYDDLSDLNPMEMESVREWEMQFTEKYHYVGRLLKPGEEPTDYS 182

Query: 67  DEEKGS 72
           D+E+ S
Sbjct: 183 DDEESS 188

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|274315753|ref|NP_001162144.1| membrane steroid binding protein [Acyrthosiphon pisum] gi|239791095|dbj|BAH72060.1| ACYPI010115 [Acyrthosiphon pisum]

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 48/64 (75%), Gaps = 1/64 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINY 65
            DASR  ATF+V+ GKDEYDDLSDLN  E ES+ EWE Q   KY Y+G+LLKPGESH  Y
Sbjct: 117 HDASRGLATFSVS-GKDEYDDLSDLNSLEIESMLEWETQFMEKYDYVGRLLKPGESHSYY 175

Query: 66  EDEE 69
            DEE
Sbjct: 176 TDEE 179

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	79
UNIPROTKB|A5PJQ6	223	PGRMC2 "Uncharacterized protei	0.924	0.327	0.573	5.3e-17
UNIPROTKB|F1PN69	223	PGRMC2 "Uncharacterized protei	0.924	0.327	0.573	5.3e-17
UNIPROTKB|A3RKG5	165	PGRMC2 "Progesterone receptor	0.924	0.442	0.573	5.3e-17
UNIPROTKB|A9LM01	223	PGRMC2 "Uncharacterized protei	0.924	0.327	0.573	5.3e-17
UNIPROTKB|O15173	223	PGRMC2 "Membrane-associated pr	0.924	0.327	0.56	1.1e-16
MGI|MGI:1918054	217	Pgrmc2 "progesterone receptor	0.924	0.336	0.56	1.1e-16
RGD|1308804	217	Pgrmc2 "progesterone receptor	0.924	0.336	0.56	1.1e-16
UNIPROTKB|F1P5M9	214	PGRMC2 "Uncharacterized protei	0.924	0.341	0.546	3.7e-16
UNIPROTKB|Q5ZLX0	195	PGRMC2 "Uncharacterized protei	0.924	0.374	0.546	3.7e-16
ZFIN|ZDB-GENE-040426-2102	201	pgrmc2 "progesterone receptor	0.924	0.363	0.533	1.3e-15

UNIPROTKB|A5PJQ6 PGRMC2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 43/75 (57%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     KDEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   149 RDASRGLATFCLDKDALKDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 208

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   209 EYTDEEDTKDHNKQD 223

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|F1PN69 PGRMC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 43/75 (57%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     KDEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   149 RDASRGLATFCLDKDALKDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 208

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   209 EYTDEEDTKDHNKQD 223

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|A3RKG5 PGRMC2 "Progesterone receptor membrane component 2" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 43/75 (57%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     KDEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:    91 RDASRGLATFCLDKDALKDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 150

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   151 EYTDEEDTKDHNKQD 165

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|A9LM01 PGRMC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 43/75 (57%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     KDEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   149 RDASRGLATFCLDKDALKDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 208

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   209 EYTDEEDTKDHNKQD 223

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|O15173 PGRMC2 "Membrane-associated progesterone receptor component 2" [Homo sapiens (taxid:9606)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 42/75 (56%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   149 RDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 208

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   209 EYTDEEDTKDHNKQD 223

GO:0020037 "heme binding" evidence=IEA

GO:0005496 "steroid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0003707 "steroid hormone receptor activity" evidence=TAS

GO:0043401 "steroid hormone mediated signaling pathway" evidence=TAS

MGI|MGI:1918054 Pgrmc2 "progesterone receptor membrane component 2" [Mus musculus (taxid:10090)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 42/75 (56%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   143 RDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 202

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   203 EYTDEEDTKDHSKQD 217

GO:0005496 "steroid binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008289 "lipid binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

RGD|1308804 Pgrmc2 "progesterone receptor membrane component 2" [Rattus norvegicus (taxid:10116)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 42/75 (56%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   143 RDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 202

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K+D
Sbjct:   203 EYTDEEDTKDHSKQD 217

GO:0005496 "steroid binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|F1P5M9 PGRMC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 41/75 (54%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   140 RDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 199

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K++
Sbjct:   200 EYTDEEDTKDHTKQE 214

GO:0020037 "heme binding" evidence=IEA

UNIPROTKB|Q5ZLX0 PGRMC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 41/75 (54%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPGE   
Sbjct:   121 RDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPS 180

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE      K++
Sbjct:   181 EYTDEEDTKDHTKQE 195

GO:0020037 "heme binding" evidence=IEA

ZFIN|ZDB-GENE-040426-2102 pgrmc2 "progesterone receptor membrane component 2" [Danio rerio (taxid:7955)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 40/75 (53%), Positives = 48/75 (64%)

Query:     6 RDASRAFATFTVTPG--KDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHI 63
             RDASR  ATF +     +DEYDDLSDLN  + ESVREWE Q   KY Y+G+LLKPG+   
Sbjct:   127 RDASRGLATFCLEKDALRDEYDDLSDLNAVQMESVREWEMQFMEKYDYVGRLLKPGDEPS 186

Query:    64 NYEDEEKGSIEEKKD 78
              Y DEE     +K +
Sbjct:   187 EYTDEEDMKDHQKHE 201

GO:0020037 "heme binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q80UU9	PGRC2_MOUSE	No assigned EC number	0.5384	0.9620	0.3502	yes	N/A
Q5XIU9	PGRC2_RAT	No assigned EC number	0.5384	0.9620	0.3502	yes	N/A
O15173	PGRC2_HUMAN	No assigned EC number	0.5384	0.9620	0.3408	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	79
KOG1110|consensus	183		99.92
KOG1108|consensus	281		99.77
PF00173	76	Cyt-b5: Cytochrome b5-like Heme/Steroid binding do	96.68

>KOG1110|consensus

Probab=99.92  E-value=4.2e-26  Score=160.83  Aligned_cols=72  Identities=39%  Similarity=0.651  Sum_probs=69.8

Q ss_pred             ceecccccchhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcccCceeeEEcCCCCCCCCCccccccchh
Q psy15440          2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLKPGESHINYEDEEKGSIE   74 (79)
Q Consensus         2 ~FAGrDaSRalat~~~~~~~~~~~dls~Lt~~el~~L~~W~~~f~~KYp~VG~l~~~~~~pt~y~~ee~~k~~   74 (79)
                      .||||||||+||+||++. .++++|+|||++.|+++|++|+.+|+.|||+||+|+.++++|..|+.++.++..
T Consensus       101 ~fAG~DASR~La~~s~d~-~d~~ddlsdL~a~e~eal~eWE~~fk~KY~~VG~L~~~~~e~~~~s~~~~~~~~  172 (183)
T KOG1110|consen  101 LFAGKDASRGLAKMSFDL-SDETDDLSDLTAEELEALNEWETKFKAKYPVVGRLVKKGEENEEYSPEEDTKDA  172 (183)
T ss_pred             hhcccchHHHHHhcccch-hhccccccccCHHHHHHHHHHHHHHhhcCceeEEeecCCcccccCCcccccccc
Confidence            599999999999999999 499999999999999999999999999999999999999999999999999876

>KOG1108|consensus

Probab=99.77  E-value=1.2e-19  Score=133.17  Aligned_cols=73  Identities=26%  Similarity=0.450  Sum_probs=68.6

Q ss_pred             ceecccccchhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcccCceeeEEcC----CCCCCCCCccccccchhh
Q psy15440          2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLK----PGESHINYEDEEKGSIEE   75 (79)
Q Consensus         2 ~FAGrDaSRalat~~~~~~~~~~~dls~Lt~~el~~L~~W~~~f~~KYp~VG~l~~----~~~~pt~y~~ee~~k~~~   75 (79)
                      .||||||||||++|+|.+. ...+++.+|++.|+.+|.+|..||.+.|++||+|++    +.|.||.|....+++.+.
T Consensus       105 hFaGRDASrAFvsGdf~e~-gl~d~v~gLs~dEllsi~dWrsFY~k~Y~~vGrv~gryYds~G~pT~~lt~v~a~~er  181 (281)
T KOG1108|consen  105 HFAGRDASRAFVSGDFEEP-GLADDVLGLSPDELLSIADWRSFYQKDYVYVGRVIGRYYDSKGAPTPYLTKVLALLER  181 (281)
T ss_pred             cccccccchheecccCCCC-cchhhhccCCHHHHhhhhhhhhhhhcccceeeEEeeeeecCCCCCcHHHHHHHHHHHH
Confidence            6999999999999999975 999999999999999999999999999999999997    899999999999887654

>PF00173 Cyt-b5: Cytochrome b5-like Heme/Steroid binding domain This prints entry is a subset of the Pfam entry; InterPro: IPR001199 Cytochromes b5 are ubiquitous electron transport proteins found in animals, plants and yeasts []

Probab=96.68  E-value=0.0017  Score=38.18  Aligned_cols=33  Identities=36%  Similarity=0.465  Sum_probs=27.9

Q ss_pred             ceecccccchhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcccCceeeEE
Q psy15440          2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKL   55 (79)
Q Consensus         2 ~FAGrDaSRalat~~~~~~~~~~~dls~Lt~~el~~L~~W~~~f~~KYp~VG~l   55 (79)
                      .+||+|+|.+|                     +......|..++..+|.+||+|
T Consensus        43 ~~aG~D~T~~f---------------------~~~~h~~~~~~~l~~~~~vG~l   75 (76)
T PF00173_consen   43 KYAGRDATDAF---------------------EEAFHSWWAEKCLEKYYKVGYL   75 (76)
T ss_dssp             TTTTSBTHHHH---------------------HHHTHHHHHHHHHHGCGEEEEE
T ss_pred             HhccccccHHH---------------------hhccCcHHHHHHccCCCEEEEe
Confidence            47999999999                     4555668888999999999997

The microsomal and mitochondrial variants are membrane-bound, while those from erythrocytes and other animal tissues are water-soluble [, ]. The 3D structure of bovine cyt b5 is known, the fold belonging to the alpha+beta class, with 5 strands and 5 short helices forming a framework for supporting a central haem group []. The cytochrome b5 domain is similar to that of a number of oxidoreductases, such as plant and fungal nitrate reductases, sulphite oxidase, yeast flavocytochrome b2 (L-lactate dehydrogenase) and plant cyt b5/acyl lipid desaturase fusion protein.; GO: 0020037 heme binding; PDB: 2I96_A 3KS0_A 1KBI_B 1KBJ_B 1LTD_A 1SZG_B 1SZF_A 1LDC_B 2OZ0_B 1LCO_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	79
1j03_A	102	Putative steroid binding protein; alpha and beta,	4e-12

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A Length = 102

 Score = 55.3 bits (133), Expect = 4e-12
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
           +DASRA    +    +D    L  L   E  ++ +WE + ++KY  +G+++
Sbjct: 52  KDASRALGKMSKNE-EDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 101

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	79
1j03_A	102	Putative steroid binding protein; alpha and beta,	99.8

>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A

Probab=99.80  E-value=2.2e-20  Score=120.04  Aligned_cols=54  Identities=26%  Similarity=0.562  Sum_probs=51.7

Q ss_pred             ceecccccchhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcccCceeeEEc
Q psy15440          2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL   56 (79)
Q Consensus         2 ~FAGrDaSRalat~~~~~~~~~~~dls~Lt~~el~~L~~W~~~f~~KYp~VG~l~   56 (79)
                      .|||+||||+|++++++.+ +++++|++|++.|+++|++|.+||++|||+||+|+
T Consensus        48 ~~AG~DaT~~f~~~~~~~~-~l~~dl~~L~~~e~~~l~~W~~~f~~kY~~VG~l~  101 (102)
T 1j03_A           48 MFAGKDASRALGKMSKNEE-DVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV  101 (102)
T ss_dssp             TTTTSBCHHHHHHTCCCSS-SCCSSCSSCCHHHHHHHHHHHHHHHTTSCEEECCC
T ss_pred             ccccchHHHHHHHcCCChh-hccCcccCCCHHHHHHHHHHHHHHhccCCeeeEEe
Confidence            5899999999999999986 78899999999999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	79
d1t0ga_	109	d.120.1.2 (A:) Putative steroid binding protein AT	1e-12

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 109

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 56.0 bits (135), Expect = 1e-12
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 6   RDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLL 56
           +DASRA    +    +D    L  L   E  ++ +WE + ++KY  +G+++
Sbjct: 59  KDASRALGKMSKNE-EDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 108

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	79
d1t0ga_	109	Putative steroid binding protein AT2G24940 {Thale	99.85

>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Cytochrome b5-like heme/steroid binding domain
superfamily: Cytochrome b5-like heme/steroid binding domain
family: Steroid-binding domain
domain: Putative steroid binding protein AT2G24940
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=2.8e-22  Score=129.33  Aligned_cols=55  Identities=25%  Similarity=0.553  Sum_probs=52.5

Q ss_pred             ceecccccchhhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcccCceeeEEcC
Q psy15440          2 QISRRDASRAFATFTVTPGKDEYDDLSDLNPAEWESVREWEEQLDSKYTYIGKLLK   57 (79)
Q Consensus         2 ~FAGrDaSRalat~~~~~~~~~~~dls~Lt~~el~~L~~W~~~f~~KYp~VG~l~~   57 (79)
                      .||||||||+|++++++++ ++++++++|+++|++.|++|.++|++|||+||+|+.
T Consensus        55 ~faG~D~sral~~~~~~~e-~~~~d~~~L~~~e~~~L~~W~~~f~~kY~~VG~LV~  109 (109)
T d1t0ga_          55 MFAGKDASRALGKMSKNEE-DVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS  109 (109)
T ss_dssp             TTTTEECHHHHHHTCCCTT-TCCSCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred             ccccccHHHHHHhcCCChh-hcCCcccCCCHHHHHHHHHHHHHHhcCCCEEEEEeC
Confidence            6999999999999999986 889999999999999999999999999999999973