Psyllid ID: psy15447

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------
Protein Sequence
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLNV
Secondary Structure (PSIPRED)
cEEEEEcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHcccccccccccccccccccEEEEEccccEEEEEccEEEEEEcccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccEEEEcHHHHHHHHccccccccccEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHccccccccccEEEEEEEEEEccccccccccHHHHHHHHHccEEEEEEcccccccccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEcccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHcHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccHcHHHcccEEEEEEcccccccEEEEccEEEEEEcccccccccccHHHHHHHHHHHHHcccccccHHHccccHHHHHHHHHHHHHHccccHEEEEcccHHccHHHHHHHcccccEEEEccccHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHccccccccccccEEEEEccEEccccccccHHHHHHHHHHcccEEEEEccccccEEccccccEEEccccccccEEEEEEcHHHHHcccccEEccHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccEEEEEEccHHHHHHHHHHHHHHcccEEEEEEEEEEEEEccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLskhkkhtinvdalinnwtpepivskaekfkdvsskyvvdqksgyivningipcinfathnylsfvenpdiekcaidcidkngvgscgprgfygtnVVHLDLENDIASFMgleetalysfgfsTSASAIAAYVKrndavfvdeNINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVymnsadicplkDILSLRSKYQArifvdesvsfgtlgstghgvteyfgvsTEEVDMIIGSLEHAlgsvggfcvgssyiiehhrlsgsgycfsaslppFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLvqghrdtplkylYLQKSDDEVASKKLLQTICDMCIqagfaitcpshldqeakkqkpsiritcnishtEQDMNSLIETLCKshdiavqplnv
Flexible Loop (DISEMBL)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVdalinnwtpepivskaekfkdvSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRqqderdtlnskVTKKFIivegvymnsadiCPLKDILSLRSKYQARIFVDESvsfgtlgstghGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKshdiavqplnv
Low Complexity Region (SEG)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFlavaankalhllkanPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLNV
Disordered region (IsUnstruct)
***TEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELL********LNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL**********IRITCNISHTE*DMNSLIETLCKSH*********
Disordered Region (DISOPRED)
*IVTE**DFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELL***********KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLN*
Disordered Region (DISEMBL)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL*********SIRITCNISHTEQDMNSLIETLCKSHDIAVQPLNV
Disordered Region (DISPRO)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLNV
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLNV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	457	2.2.26 [Sep-21-2011]
P91079	458	Serine palmitoyltransfera	yes	N/A	0.901	0.899	0.452	1e-104
O35704	473	Serine palmitoyltransfera	yes	N/A	0.879	0.849	0.448	1e-100
Q5R9T5	473	Serine palmitoyltransfera	yes	N/A	0.879	0.849	0.446	1e-100
O15269	473	Serine palmitoyltransfera	yes	N/A	0.879	0.849	0.446	1e-100
Q60HD1	473	Serine palmitoyltransfera	N/A	N/A	0.879	0.849	0.443	1e-99
Q3MHG1	473	Serine palmitoyltransfera	yes	N/A	0.866	0.837	0.450	6e-99
O54695	473	Serine palmitoyltransfera	yes	N/A	0.879	0.849	0.441	5e-98
O59682	509	Serine palmitoyltransfera	yes	N/A	0.870	0.781	0.399	1e-82
Q55FL5	479	Serine palmitoyltransfera	yes	N/A	0.888	0.847	0.375	3e-79
Q6K8E7	481	Long chain base biosynthe	yes	N/A	0.925	0.879	0.383	3e-78

>sp|P91079|SPTC1_CAEEL Serine palmitoyltransferase 1 OS=Caenorhabditis elegans GN=sptl-1 PE=2 SV=1

 Score =  378 bits (971), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/424 (45%), Positives = 272/424 (64%), Gaps = 12/424 (2%)

Query: 25  LSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCIN 84
           LS  L++ +K     D LI +WTPEP+V +  +   V +    D K    V+I+G   +N
Sbjct: 36  LSKKLTERQK-----DELIADWTPEPLVPETPQDHPVLNPKYADGKMTKDVSIDGEKYLN 90

Query: 85  FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETA 144
            A+ N+LSF+    IE  A   I K GVGSCGPRGFYGT  VHLDLE ++A FMG EE  
Sbjct: 91  MASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKFMGCEEAV 150

Query: 145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR 204
           LYS+GF+T +SAI AY K+ D +FVDE +NFAIQ GL ASR +V+YFKHN+M+HLE LL 
Sbjct: 151 LYSYGFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLL 210

Query: 205 QQDERDTLNSKVTK---KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL 261
           +Q++RD  + K  K   +FI+VEG+Y+N AD+CPL  I+  + +++ R+F+DES SFG +
Sbjct: 211 EQEQRDKKDPKKAKSVRRFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWSFGVI 270

Query: 262 GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLP 321
           G TG GVTE+F V  E+VDM++ SLE+AL S GGFCVG SY++ H RLSG GYCFSASLP
Sbjct: 271 GKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLP 330

Query: 322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381
           P LA AA++A+ ++   PS + K+ E        L       +F +QG  ++P+K++Y  
Sbjct: 331 PLLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSGSKFSLQGCPESPMKHIYYN 390

Query: 382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNISHTEQDMNSL 440
             D+E      ++T+     +    +T   +LD+ E  K +PSIR+      TE+++   
Sbjct: 391 GEDEEKQLDTFVETV---FTKNHLLLTRARYLDKDELFKIRPSIRVMFQHDLTEEEIQRA 447

Query: 441 IETL 444
           ++ +
Sbjct: 448 VDAI 451

Component of the serine palmitoyltransferase (SPT) that catalyzes the first committed step in sphingolipid biosynthesis, which is the condensation of an acyl-CoA species and L-serine. The catalytic core is composed of a heterodimer of sptl-1 and sptl-2 or sptl-1 and sptl-3 (By similarity). Required for the specification of abicobasal polarity and development of the gut lumen.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 5EC: 0

>sp|O35704|SPTC1_MOUSE Serine palmitoyltransferase 1 OS=Mus musculus GN=Sptlc1 PE=2 SV=2

 Score =  366 bits (940), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/410 (44%), Positives = 265/410 (64%), Gaps = 8/410 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           + LI  W PEP+V    K     +  +V     + + +NG  C+NFA+ N+L  + NP +
Sbjct: 58  EELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRV 117

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
           +  A   + K GVG+CGPRGFYGT  VHLDLE  +A FM  EE  +YS+GFST ASAI A
Sbjct: 118 KATAFSSLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTIASAIPA 177

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKV 216
           Y KR D +FVD    FAIQ GL ASR  ++ FKHN++  LE LL++Q   D+++   ++V
Sbjct: 178 YSKRGDIIFVDSAACFAIQKGLQASRSDIKLFKHNDVADLERLLKEQEIEDQKNPRKARV 237

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G+S 
Sbjct: 238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGISI 297

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +++D+I  ++E+AL SVGGFC G S++++H RLSG GYCFSASLPP LA AA +AL++++
Sbjct: 298 DDIDLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK-KLLQT 395
            NP +   L++KC  +H  L   +      V G   +P  +L L++S        KLLQ 
Sbjct: 358 ENPDIFAVLKKKCQNIHKSL---QGVSGLKVVGESLSPALHLQLEESTGSREKDVKLLQA 414

Query: 396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
           I D C+  G A+T   +LD+E K    PSIR+   +  TE+++     T+
Sbjct: 415 IVDQCMDKGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELQRAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q5R9T5|SPTC1_PONAB Serine palmitoyltransferase 1 OS=Pongo abelii GN=SPTLC1 PE=2 SV=1

 Score =  365 bits (938), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/410 (44%), Positives = 268/410 (65%), Gaps = 8/410 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct: 58  EELIEEWQPEPLVPLVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRV 117

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
           +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct: 118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKV 216
           Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q   D+++   ++V
Sbjct: 178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct: 238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP LA AA +AL++++
Sbjct: 298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK-KLLQT 395
            NP +   L+EKC  +H  L   +      V G   +P  +L L++S        +LLQ 
Sbjct: 358 ENPGIFAVLKEKCRQIHKAL---QGISGLKVVGEPLSPAFHLQLEESTGSREQDVRLLQE 414

Query: 396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
           I D C+    A+T   +L++E K    PSIR+   +  TE++++    T+
Sbjct: 415 IVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELDRAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|O15269|SPTC1_HUMAN Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1

 Score =  365 bits (936), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/410 (44%), Positives = 266/410 (64%), Gaps = 8/410 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           + LI  W PEP+V    K     +  +V     +   +NG  CINFA+ N+L  ++NP +
Sbjct: 58  EELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRV 117

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
           +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct: 118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKV 216
           Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q   D+++   ++V
Sbjct: 178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct: 238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP LA AA +AL++++
Sbjct: 298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK-KLLQT 395
            NP +   L+EKC  +H  L   +      V G   +P  +L L++S        +LLQ 
Sbjct: 358 ENPGIFAVLKEKCGQIHKAL---QGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQE 414

Query: 396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
           I D C+    A+T   +L++E K    PSIR+   +  TE+++     T+
Sbjct: 415 IVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELERAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates, with a slight preference for C14-CoA. The SPTLC1-SPTLC2-SPTSSB complex shows a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme displays an ability to use a broader range of acyl-CoAs, without apparent preference.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q60HD1|SPTC1_MACFA Serine palmitoyltransferase 1 OS=Macaca fascicularis GN=SPTLC1 PE=2 SV=1

 Score =  363 bits (933), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 182/410 (44%), Positives = 266/410 (64%), Gaps = 8/410 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct: 58  EELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRV 117

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
           +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct: 118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKV 216
           Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q   D+++   ++V
Sbjct: 178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct: 238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP LA AA +AL++++
Sbjct: 298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK-KLLQT 395
            NP +   L+EKC  +H  L   +      V G   +P  +L L++S        +LLQ 
Sbjct: 358 ENPGIFAVLKEKCRQIHKAL---QGISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQE 414

Query: 396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
           I D C+    A+T   +L++E K    PSIR+   +  T +++     T+
Sbjct: 415 IVDQCMDRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTAEELERAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q3MHG1|SPTC1_BOVIN Serine palmitoyltransferase 1 OS=Bos taurus GN=SPTLC1 PE=2 SV=1

 Score =  361 bits (927), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 182/404 (45%), Positives = 264/404 (65%), Gaps = 8/404 (1%)

Query: 46  WTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAID 105
           W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP ++  A+ 
Sbjct: 64  WQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRLKAAALA 123

Query: 106 CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND 165
            + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI AY KR D
Sbjct: 124 SLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKRGD 183

Query: 166 AVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKVTKKFII 222
            VFVD+   FAIQ GL ASR  ++ F HN+M  LE LL++Q   D+++   ++VT++FII
Sbjct: 184 IVFVDKAACFAIQKGLQASRSDIKVFNHNDMDDLERLLKEQEIEDQKNPRKARVTRRFII 243

Query: 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMI 282
           VEG+YMN+  +CPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE+FG+S +++D+I
Sbjct: 244 VEGLYMNTGTVCPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHFGISIDDIDLI 303

Query: 283 IGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL 342
             ++E++L S+GGFC G S++I+H RLSG GYCFSASLPP LA AA +AL++++ NP + 
Sbjct: 304 SANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIMEENPGIF 363

Query: 343 TKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-EVASKKLLQTICDMCI 401
             L+EKC  +H  L   +      V G   +P  +L L+++        KLLQ I   C+
Sbjct: 364 AVLKEKCKRIHKAL---QGIPGLKVVGESISPALHLQLEETTGCRERDVKLLQEIVTQCM 420

Query: 402 QAGFAITCPSHLDQEAKK-QKPSIRITCNISHTEQDMNSLIETL 444
             G A+T   +L++E K    PSIR+   +  TE+D+     T+
Sbjct: 421 DRGIALTQARYLEKEEKYLPPPSIRVVVTVEQTEEDLEKAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|O54695|SPTC1_CRIGR Serine palmitoyltransferase 1 OS=Cricetulus griseus GN=SPTLC1 PE=1 SV=1

 Score =  358 bits (919), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 181/410 (44%), Positives = 265/410 (64%), Gaps = 8/410 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           + LI  W PEP+V    K     +  +V     + + +NG  C+NFA+ N+L  + NP +
Sbjct: 58  EELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRV 117

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
           +  A+  + K GVG+CGPRGFYGT  VHLDLE  +A FM  EE  +YS+GFST ASAI A
Sbjct: 118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMRTEEAIIYSYGFSTIASAIPA 177

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DERDTLNSKV 216
           Y KR D VFVD    FAIQ GL ASR  ++ FKHN++  LE LL++Q   D+++   ++V
Sbjct: 178 YSKRGDIVFVDSAACFAIQKGLQASRSDIKLFKHNDVADLERLLKEQEIEDQKNPRKARV 237

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++FI+VEG+YMN+  +CPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G+S 
Sbjct: 238 TRRFIVVEGLYMNTGTVCPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGISI 297

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +++D+I  ++E+AL SVGGFC G S++++H RLSG GYCFSASLPP LA AA +AL++++
Sbjct: 298 DDIDLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK-KLLQT 395
            NP +   L++KC  +H  L   +      V G   +P  +L L++S        +LLQ 
Sbjct: 358 ENPGIFAVLKKKCQHIHKSL---QGISGLKVVGESLSPALHLQLEESTGSREKDVQLLQE 414

Query: 396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
           +   C+  G A+T   +LD+E K    PSIR+   +  TE+++     T+
Sbjct: 415 MVIHCMNEGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELERAASTI 464

Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|O59682|LCB1_SCHPO Serine palmitoyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lcb1 PE=3 SV=1

 Score =  307 bits (786), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 164/411 (39%), Positives = 254/411 (61%), Gaps = 13/411 (3%)

Query: 38  NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN--INGIPCINFATHNYLSFVE 95
            ++ L+++W PEP+V++    + +  K +   +S ++    I+G P  NFA+ N+L   E
Sbjct: 83  EINELVDDWKPEPLVAELTDVEKLELKSIPVLESVHLHTKLIDGRPITNFASFNFLDLAE 142

Query: 96  NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSAS 155
           N  I +CA+  + + G+G+CGP GFYGT   HL LE DIASF+G+E   +Y+  F T +S
Sbjct: 143 NKHITECAVATLRECGLGACGPPGFYGTQDKHLRLEKDIASFIGVERAIVYAQSFQTISS 202

Query: 156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQ-QDERDTLNS 214
            I A+ KR D + VDE  NFAIQ G+  SR  ++YFKHNNM+ LE +L++ +D+    N 
Sbjct: 203 VIPAFSKRGDILVVDEACNFAIQKGIQISRTTIRYFKHNNMKDLERILQELEDDFVKHNR 262

Query: 215 KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGV 274
            +T++FII EG+  N  D+  L  I++L+ KY+ R+ +DE+ SFGT G TG G+TE+FGV
Sbjct: 263 PLTRRFIITEGISENYGDMVDLTKIVALKKKYKYRLILDETWSFGTCGRTGKGLTEHFGV 322

Query: 275 STEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL 334
              +V++IIGSL  +L   GGFC GS  ++EH RLSG  Y +SA+LP  LAVAA +A+ +
Sbjct: 323 PPTDVEIIIGSLTTSLAGGGGFCAGSELMVEHQRLSGMAYIYSAALPASLAVAAYEAISI 382

Query: 335 L-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK-- 391
           L +   S+L  LR K    H+ LS++K    F      ++P+  ++L+  D +++  K  
Sbjct: 383 LSRDGGSMLNDLRSKSALFHAKLSRNKF---FETSSDIESPI--IHLRFKDKDISHDKQV 437

Query: 392 -LLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNISHTEQDMNSL 440
            LL+ I ++CI  GF I     ++  E  K +PS+RI  +  H+ +++  L
Sbjct: 438 FLLEEIVELCIAEGFLIARAKRVESLERVKVQPSLRICISTGHSAEEIEKL 488

Component of serine palmitoyltransferase (SPT), which catalyzes the committed step in the synthesis of sphingolipids, the condensation of serine with palmitoyl CoA to form the long chain base 3-ketosphinganine.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q55FL5|SPTC1_DICDI Serine palmitoyltransferase 1 OS=Dictyostelium discoideum GN=sptA PE=3 SV=1

 Score =  296 bits (757), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 155/413 (37%), Positives = 238/413 (57%), Gaps = 7/413 (1%)

Query: 40  DALINNWTPEPIVSKAEKFKDVS-SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPD 98
           D LI  W+P P+  K+   + ++ ++ ++ +  G  V IN    +N A  NYL  + NP+
Sbjct: 59  DELIREWSPIPLTPKSNPLEVLNQTELIIQESEGTHVTINNKKYLNLARSNYLGLINNPE 118

Query: 99  IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA 158
           I K + + I K GVGSCGPRGFYGT  VHLDLE   ASFM   E  LYS  ++T +SAI 
Sbjct: 119 INKISENAIRKYGVGSCGPRGFYGTIDVHLDLEKKTASFMKTPEAVLYSSAYATISSAIP 178

Query: 159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTK 218
           ++ K  D + VD  ++  +Q G+  SR ++ YF HN+M  L+ +L Q   + +  +K+ +
Sbjct: 179 SFSKIGDIIIVDRGVSQPVQVGVSLSRSRIYYFNHNDMDDLQRVLEQTQFKGS-KAKIVR 237

Query: 219 KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE 278
           KF+++EG+Y NS  I PL  IL  + +Y+ R+ +DES S G LGSTG G+TE++ + T  
Sbjct: 238 KFVVIEGLYYNSGTIAPLPQILKFKEQYKFRLIMDESHSVGVLGSTGRGLTEHYNIDTNL 297

Query: 279 VDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN 338
           VD++ GS  ++  S GGFC GS  ++ H RL+G GY FSASLPPFLA ++ KA+ +L+ N
Sbjct: 298 VDILTGSYGNSFSSGGGFCCGSPEVVYHQRLNGVGYVFSASLPPFLACSSTKAIEMLEEN 357

Query: 339 PSLLTKLREKCNTMHSLLSQHKVTQRFL-VQGHRDTPLKYLYLQKS----DDEVASKKLL 393
           P +L  L      ++  L++       L +     +P+ +L L  S     + +  + LL
Sbjct: 358 PKMLEMLHSNIGELYQGLNKSGALNGLLEITSLPISPVIHLSLLDSKSNKSNRINDELLL 417

Query: 394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446
           Q I D  +  G  +T   ++  E    KPSIRI+ + + +   +   IE + K
Sbjct: 418 QKIVDKAMDYGLLLTRAKYVSAEKFIPKPSIRISVSSNLSSDQIKQSIEIIKK 470

Component of serine palmitoyltransferase (SPT), which catalyzes the committed step in the synthesis of sphingolipids, the condensation of serine with palmitoyl CoA to form the long chain base 3-ketosphinganine.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q6K8E7|LCB1B_ORYSJ Long chain base biosynthesis protein 1b OS=Oryza sativa subsp. japonica GN=Os02g0806900 PE=2 SV=1

 Score =  293 bits (749), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 168/438 (38%), Positives = 249/438 (56%), Gaps = 15/438 (3%)

Query: 14  GLFLPLTLFIVLSLSLSKHKKHTIN--VDALINNWTPEPIVSKAEKFKDVSSKYVVDQKS 71
           GL +   LF +   S    KK      VD L + W PEP+    ++   + +   ++  +
Sbjct: 44  GLLIAAILFQLSRKSYKPPKKPLTEREVDELCDEWQPEPLCPPIKEGARIEAP-TLESAA 102

Query: 72  GYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLE 131
           G    ++G   +NFA+ NYL  + N  I    I  ++K GVGSCGPRGFYGT  VHLD E
Sbjct: 103 GPHTIVDGKEVVNFASANYLGLIGNEKILDSCIGSVEKYGVGSCGPRGFYGTIDVHLDCE 162

Query: 132 NDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYF 191
             IA F+G +++ LYS+G ST  S I A+ K+ D +  DE +++A+Q GL  SR  V YF
Sbjct: 163 TKIAKFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYF 222

Query: 192 KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIF 251
           KHN+M  L   L +    +    K+ +++I+VE +Y NS  I PL +I+ L+ KY+ R+ 
Sbjct: 223 KHNDMASLASTLEKLTHGNKRTEKI-RRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVI 281

Query: 252 VDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSG 311
           ++ES SFG LG +G G+ E++GV  E++D+I   + +AL + GGFC GS  +++H RLS 
Sbjct: 282 LEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRVVDHQRLSS 341

Query: 312 SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR 371
           SGY FSASLPP+LA AA  A+  L+ NPS+L  LR     +H  LS     Q   +  + 
Sbjct: 342 SGYVFSASLPPYLASAAISAVDHLEENPSVLANLRSNITLLHKELSD---VQGLEIASNI 398

Query: 372 DTPLKYLYLQKS-DDEVASKKLLQTICDMCIQAG---FAITCPSHLDQEAKKQKP-SIRI 426
            +P+ +L L+ S    VA  +LL+ I +  ++      A T  S LD   K + P  IR+
Sbjct: 399 LSPIVFLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATKRSSLD---KCRLPVGIRL 455

Query: 427 TCNISHTEQDMNSLIETL 444
             +  HTE D+  + E+L
Sbjct: 456 FVSAGHTESDILKVSESL 473

Serine palmitoyltransferase (SPT). The heterodimer formed with LCB2 constitutes the catalytic core.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
321456585	468	hypothetical protein DAPPUDRAFT_301811 [	0.936	0.914	0.475	1e-114
156543681	459	PREDICTED: serine palmitoyltransferase 1	0.947	0.943	0.453	1e-111
328698715	466	PREDICTED: serine palmitoyltransferase 1	0.892	0.875	0.458	1e-108
194883444	468	GG20359 [Drosophila erecta] gi|190658998	0.877	0.856	0.479	1e-106
158289895	469	AGAP010427-PA [Anopheles gambiae str. PE	0.894	0.872	0.460	1e-106
383862846	468	PREDICTED: serine palmitoyltransferase 1	0.877	0.856	0.466	1e-105
195485107	468	GE12518 [Drosophila yakuba] gi|194177054	0.877	0.856	0.474	1e-105
195123003	465	GI18787 [Drosophila mojavensis] gi|19391	0.908	0.892	0.446	1e-105
340719890	471	PREDICTED: serine palmitoyltransferase 1	0.947	0.919	0.433	1e-104
195333974	468	GM21446 [Drosophila sechellia] gi|194125	0.877	0.856	0.472	1e-104

>gi|321456585|gb|EFX67688.1| hypothetical protein DAPPUDRAFT_301811 [Daphnia pulex]

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/437 (47%), Positives = 288/437 (65%), Gaps = 9/437 (2%)

Query: 14  GLFLPLTLFIVL-SLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSG 72
           GL +    +++L    + K K      + LI+ W PEP+V    +       +VV+ K G
Sbjct: 26  GLLMVWVAWLLLRKPKIRKPKLTEKEQEELISEWQPEPLVPDTPEDHPALDPFVVEGKVG 85

Query: 73  YIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLEN 132
             V +NG  C+N ATHNYL  VE+  +E  A++CI K GVGSCGPRGFYGT  VHL+LE 
Sbjct: 86  KYVCVNGRDCLNLATHNYLGLVEDKTMEDSAVECIKKYGVGSCGPRGFYGTVDVHLNLET 145

Query: 133 DIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFK 192
            +A FM LEE  +YS+GFST ASAI AY KR D +F DE +NFA+Q GL ASR  V++FK
Sbjct: 146 RLAQFMELEEALIYSYGFSTIASAIPAYAKRGDVIFADEGVNFAVQKGLEASRSDVRFFK 205

Query: 193 HNNMQHLEELL---RQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249
           HN+M+ LE LL   R ++ ++  N K  +KF+++EGVYMNS DICPL +I+ L+SKY+ R
Sbjct: 206 HNDMKDLERLLEAQRSKELKNPKNGKNVRKFLVIEGVYMNSGDICPLPEIVELKSKYKVR 265

Query: 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRL 309
           +FVDES+SFGTLG  G G+TEY+G+ T+ +D+I+GSLE+A+ SVGGFCVG+SY+++H RL
Sbjct: 266 LFVDESISFGTLGRHGKGITEYYGIPTDHIDLIMGSLEYAIPSVGGFCVGTSYVVDHQRL 325

Query: 310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG 369
           SG GYCFSASLPP LA AA  A+  ++ NP +   L   C  +HS LS      +  + G
Sbjct: 326 SGLGYCFSASLPPMLAAAAITAIDSMEKNPDMFLDLNNVCRQLHSALSS---LHQLRLGG 382

Query: 370 HRDTPLKYLYLQKSDD-EVASKKLLQTICDMCIQAGFAITCPSHLDQEAK-KQKPSIRIT 427
           H+D P+K+L L KS        +LL+ I +  ++ G A+   S+LDQ  +   +PS+R+ 
Sbjct: 383 HKDAPVKHLRLAKSTGCNNHDGQLLRQIANESMKRGLAVIVASYLDQSERFLPQPSLRLA 442

Query: 428 CNISHTEQDMNSLIETL 444
            N   TE D++ +I+ L
Sbjct: 443 ANRLLTENDLDKVIKIL 459

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156543681|ref|XP_001605383.1| PREDICTED: serine palmitoyltransferase 1-like, partial [Nasonia vitripennis]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/441 (45%), Positives = 290/441 (65%), Gaps = 8/441 (1%)

Query: 9   FYTSVGLFLPLTLFIVLSLS--LSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYV 66
           ++T +  F+   L++  +    LS+   +   ++  +  W PEP++ + +K     +   
Sbjct: 20  YHTVLITFIAFVLWLTFAKRRYLSESNSNNDELERKLEQWRPEPLIPETQKDHPSLNPRK 79

Query: 67  VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVV 126
           +  + G  + ++G  C+N ATHNYLS  EN +IEK AI+ ++K GVGSCGPRGFYGT  V
Sbjct: 80  ITSRVGKRIIVDGKDCLNLATHNYLSLTENAEIEKKAIETVEKYGVGSCGPRGFYGTVDV 139

Query: 127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRC 186
           HL+LE  +A FM +EE  +YS+GFST ASAI AY KR D VFVDE +NF+IQ GL ASR 
Sbjct: 140 HLELEERLAQFMQMEEAVVYSYGFSTIASAIPAYCKRKDMVFVDEKVNFSIQKGLDASRS 199

Query: 187 KVQYFKHNNMQHLEELLRQQ---DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR 243
            ++YFKHN+++ LE +L+ Q   ++++T N + T+KF+IVEG+YMN+  +CPL  +++L 
Sbjct: 200 NIKYFKHNDVEDLERILKAQSGLNKKNTKNIETTRKFLIVEGIYMNTGTLCPLPQLVALC 259

Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
            KY+ RIFVDES+SFGTLG+TG GVTE+F V   E+DMI+GSLE A+GS+GGFCVGSS+I
Sbjct: 260 RKYKLRIFVDESISFGTLGATGRGVTEHFNVPRHEIDMIMGSLEWAIGSIGGFCVGSSFI 319

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ 363
           IEH RLSG GYCFSASLPP L  AA  +L +++ NP +   L++KC    + +   K   
Sbjct: 320 IEHQRLSGLGYCFSASLPPLLTSAAITSLDIMENNPEIFATLKQKCQAFDNGV---KKIN 376

Query: 364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPS 423
                   D+P+K+LYL++  D    KKL++ I D C +   +I  P++L  E    +PS
Sbjct: 377 SLECISFVDSPVKHLYLKEKLDYDKEKKLIKEISDKCFENNLSIIVPAYLHAERDYPRPS 436

Query: 424 IRITCNISHTEQDMNSLIETL 444
           +RI    +  + D+   ++TL
Sbjct: 437 LRICICTALNQSDIEFALQTL 457

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328698715|ref|XP_001952411.2| PREDICTED: serine palmitoyltransferase 1-like [Acyrthosiphon pisum]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/412 (45%), Positives = 281/412 (68%), Gaps = 4/412 (0%)

Query: 38  NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENP 97
           +++  I  WTP+P+V+           Y++D K+ + + IN   CINFATHNY +F+ N 
Sbjct: 51  DMEQKIKLWTPKPLVNTTSLSALPMENYIIDGKTEHYITINDRLCINFATHNYFNFMSNK 110

Query: 98  DIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI 157
            IE   +D ++K G+GSCGPR FYGT  +H++LE  IA FM +EE  +YS+GFST  SAI
Sbjct: 111 SIENNVVDAVNKYGIGSCGPRAFYGTFDIHIELEEKIAKFMEMEEAVIYSYGFSTVTSAI 170

Query: 158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVT 217
            AY+K  D V+VDE +NFAIQ GL +S+ ++ YFKHN  + LE L+ +++   T+  +  
Sbjct: 171 QAYIKSRDIVYVDEEVNFAIQKGLQSSKAELVYFKHNCPEDLERLILEKNA--TMRRRNR 228

Query: 218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE 277
           + F+IVEG+YMN+ +IC L  ++ +R K++ RIF+DE++SFG LG  G G+TE+F +  +
Sbjct: 229 RAFLIVEGIYMNTGNICNLPKLIDIRIKHKIRIFIDETISFGILGEKGRGITEHFNIPKD 288

Query: 278 EVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA 337
           EVD+IIGSLE AL SVGGFCVGS++++EH RLSG GYCFSASLPP L+ AA KAL  ++ 
Sbjct: 289 EVDLIIGSLETALSSVGGFCVGSTFVVEHQRLSGLGYCFSASLPPLLSAAAIKALDEIEK 348

Query: 338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL-QKSDDEVASKKLLQTI 396
           +P +L+KLRE+  ++H  L + ++ + F +     +PLK+LYL   S      +++L+ I
Sbjct: 349 HPEMLSKLRERSISLHKSLRKSQLMKHFTLGSDESSPLKHLYLIDNSLLHSEQQQILKKI 408

Query: 397 CDMCIQAGFAITCPSHL-DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447
            D CI  G AIT  ++L D+E K   PSIR+  +I  T+++++ LI+TL ++
Sbjct: 409 VDYCISKGVAITTAAYLSDREYKIPTPSIRLLTSIKTTDEEIDVLIDTLLQA 460

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194883444|ref|XP_001975811.1| GG20359 [Drosophila erecta] gi|190658998|gb|EDV56211.1| GG20359 [Drosophila erecta]

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/411 (47%), Positives = 271/411 (65%), Gaps = 10/411 (2%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           D +I ++ PEP+V+  +    +    VV  K G  + ++G  C+N  +HNYL F+E+ +I
Sbjct: 54  DRIIADYEPEPLVADTDPNHPLLHTRVVQSKVGKRIKVDGHDCLNLGSHNYLGFLEDQEI 113

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
            + A   + K GVGSCGPRGFYGT  VHLDLE+ IA FMGLEE  +YS+GFST ASAI A
Sbjct: 114 LEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPA 173

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSK---V 216
           Y KR D +FVDE +NFAIQ GL ASR  + +FKHN++Q LE LL +QD+RD  N K    
Sbjct: 174 YAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVQDLERLLVEQDKRDQKNPKKAAK 233

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++F++ EG+YMN+ +ICPL ++++LR KY+ R+F+DES+SFGTLG  GHGVTE+F V  
Sbjct: 234 TRRFLVAEGIYMNTGEICPLPELVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDR 293

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +EVD+I   +E ++ +VGGFCVGS +I EH RLSG GY FSASLPP L  AA  AL   +
Sbjct: 294 DEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFE 353

Query: 337 ANPSLLTKLREKCNTMHS-LLSQHKVTQRFLVQGHRDTPLKYLYL-QKSDDEVASKKLLQ 394
             P +  +L+ K  T+H   L   K+T R    GH  +P+K+LYL Q +++     KLL 
Sbjct: 354 REPQIFEQLQAKSKTLHQKFLRFSKLTLR----GHELSPVKHLYLAQPAENFDKELKLLT 409

Query: 395 TICDMCIQAGFAITCPSHL-DQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
            + D CI  G A+   ++L ++E +  +PSIRI  N      DM++  E +
Sbjct: 410 QLADKCIARGVAVVQAAYLQNRERQPVRPSIRIAVNRLLESADMDNAFEVI 460

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158289895|ref|XP_311520.4| AGAP010427-PA [Anopheles gambiae str. PEST] gi|157018378|gb|EAA07184.4| AGAP010427-PA [Anopheles gambiae str. PEST]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/417 (46%), Positives = 272/417 (65%), Gaps = 8/417 (1%)

Query: 33  KKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLS 92
           KK  ++ + ++  WTPEP+V++  +        +V+   G +VN+NG  CIN ATHNYL 
Sbjct: 44  KKMPMSEEEILARWTPEPLVAEVPQDHPALKTKIVEGPVGKMVNVNGKECINMATHNYLG 103

Query: 93  FVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFST 152
             E+ DI++ AI  + K GVGSCGPRGFYGT  VHL+LE  +A FM +EE  +YS+ FST
Sbjct: 104 LAEDEDIKQAAIKSLRKYGVGSCGPRGFYGTVDVHLELEERLAKFMNVEEAVVYSYAFST 163

Query: 153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ---DER 209
            ASAI AY KR D +FVDE +NFAIQ GL ASR K+ Y+KHN+M  LE LL++Q   D+R
Sbjct: 164 IASAIPAYSKRGDLIFVDECVNFAIQKGLDASRSKIFYYKHNDMDDLERLLQKQQIEDKR 223

Query: 210 DTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT 269
           +   +K T++F++ E +YMN+ ++CPL  ++ LR++Y+ R F+DES+SFG LG +G G+ 
Sbjct: 224 NPAKAKKTRRFLVAEAIYMNTGEVCPLPRLVELRARYKLRFFLDESISFGVLGDSGRGLI 283

Query: 270 EYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAAN 329
           E+  V   EVD++   LE +  ++GGFC GSS+I+EH RLSG GYCFSASLPP LA AA 
Sbjct: 284 EHCNVDKTEVDLVSAGLEWSAATIGGFCAGSSFIVEHQRLSGLGYCFSASLPPLLAQAAI 343

Query: 330 KALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS 389
            AL   ++NP +  +LRE+C  + + LSQ K    F  +G   +P+K+LYL+   +  A 
Sbjct: 344 SALDRFESNPRIFVELRERCRMVSNKLSQLK---HFQSRGDPLSPVKHLYLKHKHESWAH 400

Query: 390 KK-LLQTICDMCIQAGFAITCPSHLDQEAKK-QKPSIRITCNISHTEQDMNSLIETL 444
           +K LL  I   CI  G A+    +L+   K   +PSIR+T N   TE++++     L
Sbjct: 401 EKMLLDEISTECIDNGLAVIAAEYLETMEKHCPRPSIRLTVNRLLTEKEIDDAFRIL 457

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383862846|ref|XP_003706894.1| PREDICTED: serine palmitoyltransferase 1-like [Megachile rotundata]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/407 (46%), Positives = 263/407 (64%), Gaps = 6/407 (1%)

Query: 46  WTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAID 105
           W PEP+++ ++      S   V  ++G  + +NG  C+N  THNYL  +E+ +IE  AI 
Sbjct: 60  WQPEPLITSSQPNHSSLSPRCVTSRAGKSIVVNGKECLNLGTHNYLGLIESNEIETKAIA 119

Query: 106 CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND 165
            + K GVGSCGPRGFYGT  VHL+LE  +A +   EE  +YS+GFST ASA+AAY KR D
Sbjct: 120 AVRKYGVGSCGPRGFYGTVDVHLELEEHLADYTDTEEAVVYSYGFSTIASAVAAYCKRRD 179

Query: 166 AVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVT---KKFII 222
            VFVDE +NFAIQ GL A++  + YFKHN++  L  LL +Q + D  N K     K+F+I
Sbjct: 180 LVFVDEKVNFAIQKGLDATKANIIYFKHNDVNDLSSLLMKQAKLDEQNPKKAAKLKRFLI 239

Query: 223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMI 282
           VEG+YMN+ +ICPL  +++L  KY+ RIF+DES+SFGTLG  G GVTE+FGV   E+DMI
Sbjct: 240 VEGIYMNTGNICPLPQLVALCKKYKLRIFIDESISFGTLGKHGKGVTEHFGVPRHEIDMI 299

Query: 283 IGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL 342
           IGSL+ A+GS+GGFCVG+S+IIEH RLSG GYCFSASLPP L  AA  +L ++K NP + 
Sbjct: 300 IGSLDWAIGSIGGFCVGTSFIIEHQRLSGLGYCFSASLPPLLTAAAITSLEIMKNNPQIF 359

Query: 343 TKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ 402
             L++ C  +H  L               ++P+K++YL++  D    +KLL  I D CI+
Sbjct: 360 KSLKDNCIAIHDGLQN---VNSLECLSFPESPVKHVYLKEKLDRSTEEKLLSKISDKCIE 416

Query: 403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD 449
              AI  P++L+ E    +PS+R+  +    + D++  +  L K  D
Sbjct: 417 NNVAIIPPAYLEAEKNLPRPSLRLCVSTLLNKSDIDFALNVLKKCTD 463

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195485107|ref|XP_002090953.1| GE12518 [Drosophila yakuba] gi|194177054|gb|EDW90665.1| GE12518 [Drosophila yakuba]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/411 (47%), Positives = 270/411 (65%), Gaps = 10/411 (2%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           D +I ++ PEP+V+  +    +    VV  K G  + ++G  C+N  +HNYL F+E+ +I
Sbjct: 54  DRIIADYEPEPLVADTDPNHPLLHTRVVQSKVGKRIKVDGHDCLNLGSHNYLGFLEDQEI 113

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
            + A   + K GVGSCGPRGFYGT  VHLDLE+ IA FMGLEE  +YS+GFST ASAI A
Sbjct: 114 LEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPA 173

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSK---V 216
           Y KR D +FVDE +NFAIQ GL ASR  + +FKHN++Q LE LL +Q++RD  N K    
Sbjct: 174 YAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVQDLERLLIEQEKRDQKNPKKAAK 233

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++F++ EG+YMN+ +ICPL  +++LR KY+ R+F+DES+SFGTLG  GHGVTE+F V  
Sbjct: 234 TRRFLVAEGIYMNTGEICPLPQLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDR 293

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +EVD+I   +E ++ +VGGFCVGS +I EH RLSG GY FSASLPP L  AA  AL   +
Sbjct: 294 DEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFE 353

Query: 337 ANPSLLTKLREKCNTMHS-LLSQHKVTQRFLVQGHRDTPLKYLYL-QKSDDEVASKKLLQ 394
             P +  +L+ K  T+H   L   K+T R    GH  +P+K+LYL Q +++     KLL 
Sbjct: 354 REPQIFEQLQAKSKTLHQKFLGLSKLTLR----GHELSPVKHLYLAQPAENFDKELKLLA 409

Query: 395 TICDMCIQAGFAITCPSHL-DQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
            + D CI  G A+   ++L ++E +  +PSIRI  N      +++S  E +
Sbjct: 410 ELADKCIARGVAVVQAAYLQNRERQPVRPSIRIAVNRLLENAEIDSAFEVI 460

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195123003|ref|XP_002005999.1| GI18787 [Drosophila mojavensis] gi|193911067|gb|EDW09934.1| GI18787 [Drosophila mojavensis]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/430 (44%), Positives = 285/430 (66%), Gaps = 15/430 (3%)

Query: 20  TLFIVLSLSLSKHKKHTINV-----DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYI 74
           TL ++  ++L  HK+    +     ++LI  + PEP+V+  +    +    +V+ + G  
Sbjct: 26  TLLLITVIALLLHKRGGRGLSKEQQESLIEQYEPEPLVADTDPDHPLLRTRLVESRVGKR 85

Query: 75  VNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI 134
           + +NG  C+N  +HNYL  +E+ +I + A  C+ K GVGSCGPRGFYGT  VHL+LE+ +
Sbjct: 86  IVVNGHNCLNLGSHNYLGLLEDDEILEEACKCLRKYGVGSCGPRGFYGTMDVHLELEDRL 145

Query: 135 ASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN 194
           A FMGLEE  +YS+GFST ASAI AY KR D +FVDE +NFAIQ GL ASR  + +FKHN
Sbjct: 146 AKFMGLEEAIVYSYGFSTVASAIPAYAKRGDIIFVDEAVNFAIQKGLDASRSTIVFFKHN 205

Query: 195 NMQHLEELLRQQDERDTLNSK---VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIF 251
           ++Q LE  L+QQ++RD  N K    T++F++VEG+YMN+  +CPL +++ LR KY+ R+F
Sbjct: 206 DVQDLERSLQQQEKRDQQNPKKAQKTRRFLVVEGIYMNTGKLCPLPELVELRKKYKLRLF 265

Query: 252 VDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSG 311
           +DE++SFGTLG TG G+TE+F V+ +E+D+I  S+E ++ ++GGFCVGS +I EH RLSG
Sbjct: 266 LDETISFGTLGQTGRGITEHFNVNRDEIDLISASMEGSMATIGGFCVGSHFIAEHQRLSG 325

Query: 312 SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR 371
            GY FSASLPP L  AA  AL   +  P + ++L+E+   +H   +Q K+  +  + G  
Sbjct: 326 LGYIFSASLPPMLTQAAISALDRFEREPQIFSQLQERSRQVH---TQFKLFTKLKLGGDE 382

Query: 372 DTPLKYLYLQKSDD--EVASKKLLQTICDMCIQAGFAITCPSHL-DQEAKKQKPSIRITC 428
            +P+K+LYL +  +  EV S KLL  + D CI+ G A+   ++L ++E K  +PS+RI  
Sbjct: 383 LSPVKHLYLAEDRESFEVES-KLLSQVSDKCIERGVAVVEAAYLRNREHKPIRPSLRIVV 441

Query: 429 NISHTEQDMN 438
           N   T+ D+ 
Sbjct: 442 NRLLTDNDIR 451

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340719890|ref|XP_003398377.1| PREDICTED: serine palmitoyltransferase 1-like [Bombus terrestris]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/441 (43%), Positives = 280/441 (63%), Gaps = 8/441 (1%)

Query: 9   FYTSVGLFLPLTLFIVLSLS-LSKHKKHTIN-VDALINNWTPEPIVSKAEKFKDVSSKYV 66
           ++  +G FL L L   +S    S+ +  T + ++  +  W PEP+++  +      +   
Sbjct: 24  YHMLLGTFLILWLIWFISKRYFSRDRTLTEDEIERKLAEWNPEPLINNPQMNHISLNPRC 83

Query: 67  VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVV 126
           +  ++G  + ++G  C+N  THNYL   EN +IEK AI  I K GVGSCGPRGFYGT  V
Sbjct: 84  ITSRAGKRIVVDGKDCLNLGTHNYLGLTENNEIEKDAIAAIRKYGVGSCGPRGFYGTVDV 143

Query: 127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRC 186
           HL+LE  +A +   EE  +YS+GFST ASAIAAY KR D +FVDE +NFAIQ GL A++ 
Sbjct: 144 HLELEERLADYTDTEEAVVYSYGFSTIASAIAAYCKRRDLIFVDEQVNFAIQKGLDATKA 203

Query: 187 KVQYFKHNNMQHLEELLRQQ---DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR 243
            + YFKHN++  L  LL +Q   DE++   +   K+F+IVEG+YMN+ +ICPL ++++L 
Sbjct: 204 NITYFKHNDVNDLSNLLMKQAKIDEQNLKKAAKIKRFLIVEGIYMNTGNICPLPELVALC 263

Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
            +Y+ RIF+DES+SFGTLG  G G+TE+F V   E+DMI+GSL+ A+GS+GGFCVG+S+I
Sbjct: 264 RQYKLRIFIDESISFGTLGKHGKGITEHFDVPKREIDMIMGSLDWAMGSIGGFCVGTSFI 323

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ 363
           IEH RLSG GYCFSASLPP L  AA  +L+++K NP L   LR+ C  ++  L      +
Sbjct: 324 IEHQRLSGLGYCFSASLPPLLTTAAITSLNIMKNNPQLFRSLRDNCIAINEGLQNIHCLE 383

Query: 364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPS 423
                   ++P+K++YL+   D    +KLL  I D CI+   A+  P++L+ E    +PS
Sbjct: 384 ---CSSFPESPVKHVYLKNKKDRATEEKLLSKISDKCIENNLAVITPAYLEAEKNVPRPS 440

Query: 424 IRITCNISHTEQDMNSLIETL 444
           +R+  +    + D++  +  L
Sbjct: 441 LRLCVSTLLNKSDIDFAVNVL 461

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195333974|ref|XP_002033661.1| GM21446 [Drosophila sechellia] gi|194125631|gb|EDW47674.1| GM21446 [Drosophila sechellia]

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/411 (47%), Positives = 270/411 (65%), Gaps = 10/411 (2%)

Query: 40  DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
           D +I ++ PEP+V+  +    +    VV  K G  + ++G  C+N  +HNYL F+E+ +I
Sbjct: 54  DRIIADYEPEPLVADTDPNHPLLHTRVVQSKVGKRIKVDGHDCLNLGSHNYLGFLEDQEI 113

Query: 100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
            + A   + K GVGSCGPRGFYGT  VHLDLE+ IA FMGLEE  +YS+GFST ASAI A
Sbjct: 114 LEKACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPA 173

Query: 160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSK---V 216
           Y KR D +FVDE +NFAIQ GL ASR  + +FKHN+++ LE LL +Q++RD  N K    
Sbjct: 174 YAKRGDLIFVDEAVNFAIQKGLDASRSSIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAK 233

Query: 217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           T++F++ EG+YMN+ +ICPL ++L+LR KY+ R+F+DES+SFGTLG  GHGVTE+F V  
Sbjct: 234 TRRFLVAEGIYMNTGEICPLPELLALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDR 293

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
           +EVD+I   +E ++ +VGGFCVGS +I EH RLSG GY FSASLPP L  AA  AL   +
Sbjct: 294 DEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFE 353

Query: 337 ANPSLLTKLREKCNTMHS-LLSQHKVTQRFLVQGHRDTPLKYLYL-QKSDDEVASKKLLQ 394
             P +  +L+ K  T+H   L   K+T R    G   +P+K+LYL Q +++     KLL 
Sbjct: 354 REPQIFEQLQAKSKTLHQKFLRFSKLTLR----GDELSPVKHLYLAQPAENFDKELKLLT 409

Query: 395 TICDMCIQAGFAITCPSHL-DQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
            + D CI  G A+   ++L ++E +  +PSIRI  N      D+++  E +
Sbjct: 410 ELADKCIARGVAVVQAAYLQNRERQPVRPSIRIAVNRLLESADIDNAFEVI 460

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	457
FB|FBgn0086532	468	Spt-I "Serine palmitoyltransfe	0.877	0.856	0.454	5.5e-93
MGI|MGI:1099431	473	Sptlc1 "serine palmitoyltransf	0.879	0.849	0.434	1.9e-90
UNIPROTKB|F1RN05	461	SPTLC1 "Uncharacterized protei	0.879	0.872	0.431	2.5e-90
UNIPROTKB|Q3MHG1	473	SPTLC1 "Serine palmitoyltransf	0.879	0.849	0.434	3.1e-90
WB|WBGene00016020	458	sptl-1 [Caenorhabditis elegans	0.901	0.899	0.441	3.1e-90
UNIPROTKB|P91079	458	sptl-1 "Serine palmitoyltransf	0.901	0.899	0.441	3.1e-90
UNIPROTKB|Q5R9T5	473	SPTLC1 "Serine palmitoyltransf	0.879	0.849	0.431	1.1e-89
UNIPROTKB|E1BQI0	477	SPTLC1 "Uncharacterized protei	0.886	0.849	0.434	1.4e-89
UNIPROTKB|O15269	473	SPTLC1 "Serine palmitoyltransf	0.879	0.849	0.431	1.7e-89
UNIPROTKB|Q60HD1	473	SPTLC1 "Serine palmitoyltransf	0.879	0.849	0.429	3.6e-89

FB|FBgn0086532 Spt-I "Serine palmitoyltransferase subunit I" [Drosophila melanogaster (taxid:7227)]

 Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
 Identities = 187/411 (45%), Positives = 264/411 (64%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             D +I ++ PEP+V+  +    +    VV  + G  + ++G  C+N  +HNYL F+E+ +I
Sbjct:    54 DRIIADYEPEPLVADTDPNHPLLHTRVVQSRVGKRIQVDGHDCLNLGSHNYLGFLEDQEI 113

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
              + A   + K GVGSCGPRGFYGT  VHLDLE+ IA FMGLEE  +YS+GFST ASAI A
Sbjct:   114 LEEACKSLRKYGVGSCGPRGFYGTMDVHLDLEDRIAKFMGLEEAIVYSYGFSTVASAIPA 173

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKV--- 216
             Y KR D +FVDE +NFAIQ GL ASR  + +FKHN+++ LE LL +Q++RD  N K    
Sbjct:   174 YAKRGDLIFVDEAVNFAIQKGLDASRSTIVFFKHNDVEDLERLLIEQEKRDQKNPKKAAK 233

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++F++ EG+YMN+ +ICPL D+++LR KY+ R+F+DES+SFGTLG  GHGVTE+F V  
Sbjct:   234 TRRFLVAEGIYMNTGEICPLPDLVALRQKYKLRLFIDESISFGTLGQGGHGVTEHFNVDR 293

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +EVD+I   +E ++ +VGGFCVGS +I EH RLSG GY FSASLPP              
Sbjct:   294 DEVDLISAGMEGSMATVGGFCVGSHFIAEHQRLSGLGYIFSASLPPMLTQAAISALDRFE 353

Query:   337 XXPSLLTKLREKCNTMHS-LLSQHKVTQRFLVQGHRDTPLKYLYL-QKSDDEVASKKLLQ 394
               P +  +L+ K  T+H   L   K+T R    G   +P+K+LYL Q +++     KLL 
Sbjct:   354 REPQIFEQLQAKSKTLHQKFLRFSKLTLR----GDEVSPVKHLYLAQPAENFDKELKLLT 409

Query:   395 TICDMCIQAGFAITCPSHL-DQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
              + D CI  G A+   ++L ++E +  +PSIRI  N      ++++  E +
Sbjct:   410 ELADKCIARGVAVVQAAYLQNRERQPVRPSIRIAVNRLLESSEIDNAFEVI 460

GO:0017059 "serine C-palmitoyltransferase complex" evidence=ISS

GO:0004758 "serine C-palmitoyltransferase activity" evidence=ISS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

MGI|MGI:1099431 Sptlc1 "serine palmitoyltransferase, long chain base subunit 1" [Mus musculus (taxid:10090)]

 Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
 Identities = 178/410 (43%), Positives = 251/410 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  C+NFA+ N+L  + NP +
Sbjct:    58 EELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRV 117

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A   + K GVG+CGPRGFYGT  VHLDLE  +A FM  EE  +YS+GFST ASAI A
Sbjct:   118 KATAFSSLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTIASAIPA 177

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D +FVD    FAIQ GL ASR  ++ FKHN++  LE LL++Q+  D  N   ++V
Sbjct:   178 YSKRGDIIFVDSAACFAIQKGLQASRSDIKLFKHNDVADLERLLKEQEIEDQKNPRKARV 237

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G+S 
Sbjct:   238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGISI 297

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E+AL SVGGFC G S++++H RLSG GYCFSASLPP              
Sbjct:   298 DDIDLISANMENALASVGGFCCGRSFVVDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DEVASKKLLQT 395
               P +   L++KC  +H  L          V G   +P  +L L++S        KLLQ 
Sbjct:   358 ENPDIFAVLKKKCQNIHKSLQG---VSGLKVVGESLSPALHLQLEESTGSREKDVKLLQA 414

Query:   396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
             I D C+  G A+T   +LD+E K    PSIR+   +  TE+++     T+
Sbjct:   415 IVDQCMDKGIALTQARYLDKEEKCLPPPSIRVVVTVEQTEEELQRAASTI 464

GO:0003824 "catalytic activity" evidence=IEA

GO:0004758 "serine C-palmitoyltransferase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006665 "sphingolipid metabolic process" evidence=IEA

GO:0006686 "sphingomyelin biosynthetic process" evidence=ISA;IMP

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0017059 "serine C-palmitoyltransferase complex" evidence=ISO;ISA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0035339 "SPOTS complex" evidence=ISO

GO:0046511 "sphinganine biosynthetic process" evidence=IMP

GO:0046512 "sphingosine biosynthetic process" evidence=IMP

GO:0046513 "ceramide biosynthetic process" evidence=IMP

UNIPROTKB|F1RN05 SPTLC1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 177/410 (43%), Positives = 256/410 (62%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct:    46 EELIEEWQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRV 105

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   106 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 165

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D VFVD+   FAIQ GL ASR  ++ F+HN+M+ LE LL++Q+  D  N   ++V
Sbjct:   166 YSKRGDIVFVDKAACFAIQKGLQASRSDIKLFEHNDMEDLERLLKEQEIEDQKNPRKARV 225

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE+FG++ 
Sbjct:   226 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHFGINI 285

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E++L S+GGFC G S++I+H RLSG GYCFSASLPP              
Sbjct:   286 DDIDLISANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 345

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DEVASKKLLQT 395
               P +   L+EKC  +H  L          V G   +P  +L L++S        KLLQ 
Sbjct:   346 ENPGIFAVLKEKCKRIHKALQG---ISGLKVAGESISPAFHLQLEESTGSRDKDVKLLQE 402

Query:   396 ICDMCIQAGFAITCPSHLDQEAKK-QKPSIRITCNISHTEQDMNSLIETL 444
             I   C+  G A+T   +L++E K    PSIR+   +  TE++++    T+
Sbjct:   403 IVTGCMDRGIALTQARYLEKEEKNLPPPSIRVVVTVEQTEEELDKAASTI 452

GO:0046512 "sphingosine biosynthetic process" evidence=IEA

GO:0046511 "sphinganine biosynthetic process" evidence=IEA

GO:0035339 "SPOTS complex" evidence=IEA

GO:0006686 "sphingomyelin biosynthetic process" evidence=IEA

GO:0004758 "serine C-palmitoyltransferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|Q3MHG1 SPTLC1 "Serine palmitoyltransferase 1" [Bos taurus (taxid:9913)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 178/410 (43%), Positives = 253/410 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct:    58 EELIEEWQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRL 117

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D VFVD+   FAIQ GL ASR  ++ F HN+M  LE LL++Q+  D  N   ++V
Sbjct:   178 YSKRGDIVFVDKAACFAIQKGLQASRSDIKVFNHNDMDDLERLLKEQEIEDQKNPRKARV 237

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FIIVEG+YMN+  +CPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE+FG+S 
Sbjct:   238 TRRFIIVEGLYMNTGTVCPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHFGISI 297

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E++L S+GGFC G S++I+H RLSG GYCFSASLPP              
Sbjct:   298 DDIDLISANMENSLASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-EVASKKLLQT 395
               P +   L+EKC  +H  L          V G   +P  +L L+++        KLLQ 
Sbjct:   358 ENPGIFAVLKEKCKRIHKALQG---IPGLKVVGESISPALHLQLEETTGCRERDVKLLQE 414

Query:   396 ICDMCIQAGFAITCPSHLDQEAKK-QKPSIRITCNISHTEQDMNSLIETL 444
             I   C+  G A+T   +L++E K    PSIR+   +  TE+D+     T+
Sbjct:   415 IVTQCMDRGIALTQARYLEKEEKYLPPPSIRVVVTVEQTEEDLEKAASTI 464

GO:0035339 "SPOTS complex" evidence=ISS

GO:0046512 "sphingosine biosynthetic process" evidence=IEA

GO:0046511 "sphinganine biosynthetic process" evidence=IEA

GO:0006686 "sphingomyelin biosynthetic process" evidence=IEA

GO:0004758 "serine C-palmitoyltransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

WB|WBGene00016020 sptl-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 187/424 (44%), Positives = 262/424 (61%)

Query:    25 LSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCIN 84
             LS  L++ +K     D LI +WTPEP+V +  +   V +    D K    V+I+G   +N
Sbjct:    36 LSKKLTERQK-----DELIADWTPEPLVPETPQDHPVLNPKYADGKMTKDVSIDGEKYLN 90

Query:    85 FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETA 144
              A+ N+LSF+    IE  A   I K GVGSCGPRGFYGT  VHLDLE ++A FMG EE  
Sbjct:    91 MASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKFMGCEEAV 150

Query:   145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR 204
             LYS+GF+T +SAI AY K+ D +FVDE +NFAIQ GL ASR +V+YFKHN+M+HLE LL 
Sbjct:   151 LYSYGFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLL 210

Query:   205 QQDERDTLNSKVTK---KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL 261
             +Q++RD  + K  K   +FI+VEG+Y+N AD+CPL  I+  + +++ R+F+DES SFG +
Sbjct:   211 EQEQRDKKDPKKAKSVRRFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWSFGVI 270

Query:   262 GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLP 321
             G TG GVTE+F V  E+VDM++ SLE+AL S GGFCVG SY++ H RLSG GYCFSASLP
Sbjct:   271 GKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLP 330

Query:   322 PFXXXXXXXXXXXXXXXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381
             P                PS + K+ E        L       +F +QG  ++P+K++Y  
Sbjct:   331 PLLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSGSKFSLQGCPESPMKHIYYN 390

Query:   382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNISHTEQDMNSL 440
               D+E      ++T+     +    +T   +LD+ E  K +PSIR+      TE+++   
Sbjct:   391 GEDEEKQLDTFVETVFT---KNHLLLTRARYLDKDELFKIRPSIRVMFQHDLTEEEIQRA 447

Query:   441 IETL 444
             ++ +
Sbjct:   448 VDAI 451

GO:0009058 "biosynthetic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

UNIPROTKB|P91079 sptl-1 "Serine palmitoyltransferase 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
 Identities = 187/424 (44%), Positives = 262/424 (61%)

Query:    25 LSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCIN 84
             LS  L++ +K     D LI +WTPEP+V +  +   V +    D K    V+I+G   +N
Sbjct:    36 LSKKLTERQK-----DELIADWTPEPLVPETPQDHPVLNPKYADGKMTKDVSIDGEKYLN 90

Query:    85 FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETA 144
              A+ N+LSF+    IE  A   I K GVGSCGPRGFYGT  VHLDLE ++A FMG EE  
Sbjct:    91 MASTNFLSFIGVKRIEDRAKQTIFKYGVGSCGPRGFYGTVDVHLDLEKELAKFMGCEEAV 150

Query:   145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR 204
             LYS+GF+T +SAI AY K+ D +FVDE +NFAIQ GL ASR +V+YFKHN+M+HLE LL 
Sbjct:   151 LYSYGFATVSSAIPAYAKKGDVIFVDEGVNFAIQKGLQASRSRVEYFKHNDMEHLERLLL 210

Query:   205 QQDERDTLNSKVTK---KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL 261
             +Q++RD  + K  K   +FI+VEG+Y+N AD+CPL  I+  + +++ R+F+DES SFG +
Sbjct:   211 EQEQRDKKDPKKAKSVRRFIVVEGLYVNYADLCPLPKIIEFKWRFKVRVFIDESWSFGVI 270

Query:   262 GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLP 321
             G TG GVTE+F V  E+VDM++ SLE+AL S GGFCVG SY++ H RLSG GYCFSASLP
Sbjct:   271 GKTGRGVTEHFNVPMEDVDMVMASLENALASTGGFCVGRSYVVGHQRLSGLGYCFSASLP 330

Query:   322 PFXXXXXXXXXXXXXXXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ 381
             P                PS + K+ E        L       +F +QG  ++P+K++Y  
Sbjct:   331 PLLATAASEAISIIDEEPSRVQKVTEMAINGQKKLQDALSGSKFSLQGCPESPMKHIYYN 390

Query:   382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNISHTEQDMNSL 440
               D+E      ++T+     +    +T   +LD+ E  K +PSIR+      TE+++   
Sbjct:   391 GEDEEKQLDTFVETVFT---KNHLLLTRARYLDKDELFKIRPSIRVMFQHDLTEEEIQRA 447

Query:   441 IETL 444
             ++ +
Sbjct:   448 VDAI 451

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IMP

UNIPROTKB|Q5R9T5 SPTLC1 "Serine palmitoyltransferase 1" [Pongo abelii (taxid:9601)]

 Score = 895 (320.1 bits), Expect = 1.1e-89, P = 1.1e-89
 Identities = 177/410 (43%), Positives = 254/410 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct:    58 EELIEEWQPEPLVPLVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRV 117

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q+  D  N   ++V
Sbjct:   178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct:   238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP              
Sbjct:   298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DEVASKKLLQT 395
               P +   L+EKC  +H  L          V G   +P  +L L++S        +LLQ 
Sbjct:   358 ENPGIFAVLKEKCRQIHKALQG---ISGLKVVGEPLSPAFHLQLEESTGSREQDVRLLQE 414

Query:   396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
             I D C+    A+T   +L++E K    PSIR+   +  TE++++    T+
Sbjct:   415 IVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELDRAASTI 464

GO:0035339 "SPOTS complex" evidence=ISS

UNIPROTKB|E1BQI0 SPTLC1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 181/417 (43%), Positives = 256/417 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  C+NFA+ N+L  ++N  +
Sbjct:    61 EELIEEWQPEPLVPPVSKDHPALNYNIVSGPPTHKIIVNGKECVNFASFNFLGLLDNEKV 120

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A   + K GVG+CGPRGFYGT  VHL+LE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   121 KSAAQASLKKYGVGTCGPRGFYGTFDVHLELEDRLAKFMRTEEAIIYSYGFATIASAIPA 180

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNS----K 215
             Y KR D VFVDE   FAIQ GL ASR  ++ FKHN+M  LE LL++Q+  D   +    +
Sbjct:   181 YSKRGDIVFVDEAACFAIQKGLQASRSNIKLFKHNDMTDLERLLKEQETEDQKKNPRKAR 240

Query:   216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS 275
             VT++FI+VEG+YMN+ DICPL +++ L+ KY+ RIF++ES+SFG LG  G G+TE+FG++
Sbjct:   241 VTRRFIVVEGLYMNTGDICPLPELIKLKYKYKVRIFLEESLSFGVLGEHGRGITEHFGIN 300

Query:   276 TEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXX 335
              +++D+I  ++E++L S+GGFC G S+II+H RLSG GYCFSASLPP             
Sbjct:   301 IDDIDLISANMENSLASIGGFCCGRSFIIDHQRLSGQGYCFSASLPPLLAAAAIEALNIM 360

Query:   336 XXXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQ 394
                P +   LR KC  +H  L          V G   +P  +L L+ S        KLL+
Sbjct:   361 EDNPEIFQTLRAKCERIHRALQG---ISGLRVVGESFSPALHLRLEDSYGSRENDVKLLK 417

Query:   395 TICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMN---SLIETLCKS 447
              I D CI +G A+T   +L++E K    PSIR+   +  TEQ+++   SLI+   KS
Sbjct:   418 RIVDYCINSGIALTQARYLEKEEKCLPSPSIRVVVTVEQTEQELDKAASLIKEAAKS 474

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004758 "serine C-palmitoyltransferase activity" evidence=IEA

GO:0006686 "sphingomyelin biosynthetic process" evidence=IEA

GO:0035339 "SPOTS complex" evidence=IEA

GO:0046511 "sphinganine biosynthetic process" evidence=IEA

GO:0046512 "sphingosine biosynthetic process" evidence=IEA

UNIPROTKB|O15269 SPTLC1 "Serine palmitoyltransferase 1" [Homo sapiens (taxid:9606)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 177/410 (43%), Positives = 252/410 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     +   +NG  CINFA+ N+L  ++NP +
Sbjct:    58 EELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRV 117

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q+  D  N   ++V
Sbjct:   178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct:   238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP              
Sbjct:   298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DEVASKKLLQT 395
               P +   L+EKC  +H  L          V G   +P  +L L++S        +LLQ 
Sbjct:   358 ENPGIFAVLKEKCGQIHKALQG---ISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQE 414

Query:   396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
             I D C+    A+T   +L++E K    PSIR+   +  TE+++     T+
Sbjct:   415 IVDQCMNRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTEEELERAASTI 464

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006686 "sphingomyelin biosynthetic process" evidence=IEA

GO:0046511 "sphinganine biosynthetic process" evidence=IEA

GO:0046512 "sphingosine biosynthetic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0004758 "serine C-palmitoyltransferase activity" evidence=IDA

GO:0030148 "sphingolipid biosynthetic process" evidence=TAS

GO:0017059 "serine C-palmitoyltransferase complex" evidence=IDA

GO:0035339 "SPOTS complex" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0006644 "phospholipid metabolic process" evidence=TAS

GO:0006665 "sphingolipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q60HD1 SPTLC1 "Serine palmitoyltransferase 1" [Macaca fascicularis (taxid:9541)]

 Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
 Identities = 176/410 (42%), Positives = 252/410 (61%)

Query:    40 DALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDI 99
             + LI  W PEP+V    K     +  +V     + + +NG  CINFA+ N+L  ++NP +
Sbjct:    58 EELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRV 117

Query:   100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA 159
             +  A+  + K GVG+CGPRGFYGT  VHLDLE+ +A FM  EE  +YS+GF+T ASAI A
Sbjct:   118 KAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPA 177

Query:   160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLN---SKV 216
             Y KR D VFVD    FAIQ GL ASR  ++ FKHN+M  LE LL++Q+  D  N   ++V
Sbjct:   178 YSKRGDIVFVDRAACFAIQKGLQASRSDIKLFKHNDMADLERLLKEQEIEDQKNPRKARV 237

Query:   217 TKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
             T++FI+VEG+YMN+  ICPL +++ L+ KY+ARIF++ES+SFG LG  G GVTE++G++ 
Sbjct:   238 TRRFIVVEGLYMNTGTICPLPELVKLKYKYKARIFLEESLSFGVLGEHGRGVTEHYGINI 297

Query:   277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFXXXXXXXXXXXXX 336
             +++D+I  ++E+AL S+GGFC G S++I+H RLSG GYCFSASLPP              
Sbjct:   298 DDIDLISANMENALASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPLLAAAAIEALNIME 357

Query:   337 XXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DEVASKKLLQT 395
               P +   L+EKC  +H  L          V G   +P  +L L++S        +LLQ 
Sbjct:   358 ENPGIFAVLKEKCRQIHKALQG---ISGLKVVGESLSPAFHLQLEESTGSREQDVRLLQE 414

Query:   396 ICDMCIQAGFAITCPSHLDQEAK-KQKPSIRITCNISHTEQDMNSLIETL 444
             I D C+    A+T   +L++E K    PSIR+   +  T +++     T+
Sbjct:   415 IVDQCMDRSIALTQARYLEKEEKCLPPPSIRVVVTVEQTAEELERAASTI 464

GO:0035339 "SPOTS complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94IB8	LCB1_ARATH	2, ., 3, ., 1, ., 5, 0	0.3563	0.9256	0.8775	yes	N/A
Q55FL5	SPTC1_DICDI	2, ., 3, ., 1, ., 5, 0	0.3753	0.8884	0.8475	yes	N/A
Q5R9T5	SPTC1_PONAB	2, ., 3, ., 1, ., 5, 0	0.4463	0.8796	0.8498	yes	N/A
A8MEX7	BIOF_ALKOO	2, ., 3, ., 1, ., 4, 7	0.3018	0.7614	0.8810	yes	N/A
O59682	LCB1_SCHPO	2, ., 3, ., 1, ., 5, 0	0.3990	0.8708	0.7819	yes	N/A
Q73KM3	BIOF_TREDE	2, ., 3, ., 1, ., 4, 7	0.3143	0.6280	0.7265	yes	N/A
A6TU88	BIOF_ALKMQ	2, ., 3, ., 1, ., 4, 7	0.3002	0.7658	0.8860	yes	N/A
O54695	SPTC1_CRIGR	2, ., 3, ., 1, ., 5, 0	0.4414	0.8796	0.8498	yes	N/A
P25045	LCB1_YEAST	2, ., 3, ., 1, ., 5, 0	0.3027	0.9234	0.7562	yes	N/A
P91079	SPTC1_CAEEL	2, ., 3, ., 1, ., 5, 0	0.4528	0.9015	0.8995	yes	N/A
Q3MHG1	SPTC1_BOVIN	2, ., 3, ., 1, ., 5, 0	0.4504	0.8665	0.8372	yes	N/A
O15269	SPTC1_HUMAN	2, ., 3, ., 1, ., 5, 0	0.4463	0.8796	0.8498	yes	N/A
O35704	SPTC1_MOUSE	2, ., 3, ., 1, ., 5, 0	0.4487	0.8796	0.8498	yes	N/A
A9BGL0	BIOF_PETMO	2, ., 3, ., 1, ., 4, 7	0.3031	0.7855	0.9134	yes	N/A
Q6K8E7	LCB1B_ORYSJ	2, ., 3, ., 1, ., 5, 0	0.3835	0.9256	0.8794	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.766
3rd Layer	2.3.1.50	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	457
PLN02822	481	PLN02822, PLN02822, serine palmitoyltransferase	1e-125
PLN03227	392	PLN03227, PLN03227, serine palmitoyltransferase-li	2e-97
COG0156	388	COG0156, BioF, 7-keto-8-aminopelargonate synthetas	7e-95
cd06454	349	cd06454, KBL_like, KBL_like; this family belongs t	2e-78
TIGR00858	360	TIGR00858, bioF, 8-amino-7-oxononanoate synthase	9e-59
PRK05958	385	PRK05958, PRK05958, 8-amino-7-oxononanoate synthas	1e-55
PRK06939	397	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzym	2e-49
PLN02483	489	PLN02483, PLN02483, serine palmitoyltransferase	5e-48
TIGR01825	385	TIGR01825, gly_Cac_T_rel, pyridoxal phosphate-depe	9e-48
TIGR01821	402	TIGR01821, 5aminolev_synth, 5-aminolevulinic acid	6e-44
TIGR01822	393	TIGR01822, 2am3keto_CoA, 2-amino-3-ketobutyrate co	2e-43
PRK09064	407	PRK09064, PRK09064, 5-aminolevulinate synthase; Va	3e-43
PRK13392	410	PRK13392, PRK13392, 5-aminolevulinate synthase; Pr	1e-36
PRK13393	406	PRK13393, PRK13393, 5-aminolevulinate synthase; Pr	2e-35
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	8e-25
PRK07179	407	PRK07179, PRK07179, hypothetical protein; Provisio	4e-21
PRK05937	370	PRK05937, PRK05937, 8-amino-7-oxononanoate synthas	5e-21
PLN02955	476	PLN02955, PLN02955, 8-amino-7-oxononanoate synthas	3e-16
PRK07505	402	PRK07505, PRK07505, hypothetical protein; Provisio	1e-11

>gnl|CDD|178417 PLN02822, PLN02822, serine palmitoyltransferase

 Score =  371 bits (954), Expect = e-125
 Identities = 168/443 (37%), Positives = 258/443 (58%), Gaps = 25/443 (5%)

Query: 14  GLFLPLTLFIVLSLSLSKHKKHTIN--VDALINNWTPEPI---VSKAEKFKDVSSKYVVD 68
           GL + + +F++   S    K+      +D L + WTPEP+   +++  + +      V++
Sbjct: 42  GLLIVVIVFLLSQKSYKPPKRPLTEKEIDELCDEWTPEPLIPPITEEMRPE----PPVLE 97

Query: 69  QKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHL 128
             +G    ING   +NFA+ NYL  + N  I++     ++K GVGSCGPRGFYGT  VHL
Sbjct: 98  SAAGPHTIINGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHL 157

Query: 129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKV 188
           D E  IA F+G  ++ LYS+G ST  S I A+ K+ D +  DE +++ IQ GL  SR  +
Sbjct: 158 DCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTI 217

Query: 189 QYFKHNNMQHLE---ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245
            YFKHN+M+ L    E L  +++R     K  +++I+VE +Y NS  I PL +I+ L+ K
Sbjct: 218 VYFKHNDMESLRNTLEKLTAENKR----KKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEK 273

Query: 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE 305
           Y+ R+ +DES SFG LG +G G++E+FGV  E++D+I  ++ HAL + GGFC GS+ +++
Sbjct: 274 YRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVD 333

Query: 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF 365
           H RLS SGY FSASLPP+LA AA  A+ +L+ NPS+L KL+E    +H  LS        
Sbjct: 334 HQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSD---IPGL 390

Query: 366 LVQGHRDTPLKYLYLQKSDDEVASK-KLLQTICDMCIQAG---FAITCPSHLDQEAKKQK 421
            +  +  +P+ +L+L+KS         LL+ I D  ++       ++  S LD+   +  
Sbjct: 391 SIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDK--CRLP 448

Query: 422 PSIRITCNISHTEQDMNSLIETL 444
             IR+  +  HTE D+    E+L
Sbjct: 449 VGIRLFVSAGHTESDILKASESL 471

Length = 481

>gnl|CDD|178766 PLN03227, PLN03227, serine palmitoyltransferase-like protein; Provisional

 Score =  297 bits (762), Expect = 2e-97
 Identities = 139/390 (35%), Positives = 218/390 (55%), Gaps = 32/390 (8%)

Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142
           +NFATH++LS   +P + + A++ +   G GSCGPRGFYGT   HL+LE  +A F+G E 
Sbjct: 1   LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTES 60

Query: 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEEL 202
             LYS G ST++S +AA+ KR D + VD  +N A+  G+  SR  V++F+HN+M+ L  +
Sbjct: 61  AILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRV 120

Query: 203 LRQQDERDT---LNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFG 259
           L Q   +D          ++F++VEG+Y N+  + PLK++++L+ ++  R+ +DES SFG
Sbjct: 121 LEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFG 180

Query: 260 TLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSA 318
           TLG +G G  E+ G+      +++  SLE+A GSVGG  VGS  +++H RLSGSGYCFSA
Sbjct: 181 TLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA 240

Query: 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQH------KVTQRFLVQGHRD 372
           S PPFLA A   A     A P LL +L +    ++S L+        K+  R ++     
Sbjct: 241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPI 300

Query: 373 TPLKYLYLQKSDDEVASKKLLQTI-------------CDMCIQAGFAITCPSHLDQEAKK 419
           +P+ YL L    D+ A+++  +T+               +    G               
Sbjct: 301 SPIIYLRLS---DQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQL------V 351

Query: 420 QKPSIRITCNISHTEQDMNSLIETLCKSHD 449
             P +R+  N SHT +D++ L+  L ++ +
Sbjct: 352 PPPCLRVVANASHTREDIDKLLTVLGEAVE 381

Length = 392

>gnl|CDD|223234 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

 Score =  291 bits (746), Expect = 7e-95
 Identities = 122/382 (31%), Positives = 205/382 (53%), Gaps = 25/382 (6%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
            +D++ G  +  +G   +NF +++YL    +P++ + A   I + GVG+ G R   GT+ 
Sbjct: 25  ALDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSD 84

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR 185
           +H++LE ++A F+G E   L+S GF  +   ++A +K+ D +F DE  + +I  G+  SR
Sbjct: 85  LHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSR 144

Query: 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245
            +V+ FKHN++ HLE LL +        +   +K I+ EGV+    DI PL +++ L  K
Sbjct: 145 AEVRRFKHNDLDHLEALLEEAR-----ENGARRKLIVTEGVFSMDGDIAPLPELVELAEK 199

Query: 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE 305
           Y A ++VDE+ + G LG  G G+ E+FG+  EEVD+I+G+L  ALGS GG+  GS+ +I+
Sbjct: 200 YGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALID 259

Query: 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF 365
           + R     + FS +LPP +A AA  AL +L+  P    +L+E      SLL         
Sbjct: 260 YLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLK-----ALG 314

Query: 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC---PSHLDQEAKKQKP 422
           LV    ++P+  +        +  ++         ++ G  ++    P+       K   
Sbjct: 315 LVLLPSESPIIPV-------ILGDEERALEASRALLEEGIYVSAIRPPTV-----PKGTA 362

Query: 423 SIRITCNISHTEQDMNSLIETL 444
            +RIT   +HTE+D++ L E L
Sbjct: 363 RLRITLTAAHTEEDIDRLAEAL 384

Length = 388

>gnl|CDD|99747 cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

 Score =  247 bits (633), Expect = 2e-78
 Identities = 118/372 (31%), Positives = 190/372 (51%), Gaps = 36/372 (9%)

Query: 81  PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL 140
             +NF +++YL    +P++ + A + +DK GVG+ G R   GT+ +H +LE ++A F G 
Sbjct: 2   KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK 61

Query: 141 EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLE 200
           E   ++S G++ +   ++    + D +  D   + +I  G+  S  K + FKHN+M+ LE
Sbjct: 62  EAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLE 121

Query: 201 ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT 260
           +LLR+            KK I+ EGVY    DI PL +++ L  KY A +FVDE+ S G 
Sbjct: 122 KLLREARR------PYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGV 175

Query: 261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASL 320
            G  G GV E FG  T++VD+I+G+L  A G+VGG+  GS  +I++ R    G+ FS SL
Sbjct: 176 YGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTSL 234

Query: 321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR--FLVQGHRDTPLKYL 378
           PP +A AA  AL +L+  P    +L+E    +   L      +   F V G     +  L
Sbjct: 235 PPAVAAAALAALEVLQGGPERRERLQENVRYLRRGL------KELGFPVGGSPSHIIPPL 288

Query: 379 YLQKSDDEVASKKLLQTICDMCIQAGFAI------TCPSHLDQEAKKQKPSIRITCNISH 432
                DD   +        D  ++ G  +      T P        +    +RI+ + +H
Sbjct: 289 IG---DDPAKAVAF----SDALLERGIYVQAIRYPTVP--------RGTARLRISLSAAH 333

Query: 433 TEQDMNSLIETL 444
           T++D++ L+E L
Sbjct: 334 TKEDIDRLLEAL 345

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life. Length = 349

>gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase

 Score =  196 bits (501), Expect = 9e-59
 Identities = 107/383 (27%), Positives = 186/383 (48%), Gaps = 31/383 (8%)

Query: 67  VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVV 126
           +D+  G  V  +G   +NF++++YL    +P++ + A    ++ G GS   R   G + +
Sbjct: 3   LDRGPGPEVVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPL 62

Query: 127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIASR 185
           H +LE ++A + G E   L+S G+  +   I+A V + D +  D  +N A +  G   S 
Sbjct: 63  HEELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDA-LNHASLIDGCRLSG 121

Query: 186 CKVQYFKHNNMQHLEELLRQ-QDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244
            +V+ ++HN+++HLE LL + + ER        +K I+ +GV+    DI PL  +++L  
Sbjct: 122 ARVRRYRHNDVEHLERLLEKNRGER--------RKLIVTDGVFSMDGDIAPLPQLVALAE 173

Query: 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYII 304
           +Y A + VD++   G LG  G G  E+FG+  E VD+ +G+L  ALGS G +  GS  +I
Sbjct: 174 RYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALI 233

Query: 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR 364
           ++         FS +LPP +A AA  AL L++  P    KL            +  +   
Sbjct: 234 DYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLA-----LIARLRAGLEAL 288

Query: 365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC---PSHLDQEAKKQK 421
                   TP+  + +  +   +A  + LQ       Q G  +     P+     ++   
Sbjct: 289 GFTLMPSCTPIVPVIIGDNASALALAEELQ-------QQGIFVGAIRPPTVPAGTSR--- 338

Query: 422 PSIRITCNISHTEQDMNSLIETL 444
             +R+T + +HT  D++ L E L
Sbjct: 339 --LRLTLSAAHTPGDIDRLAEAL 359

7-keto-8-aminopelargonic acid synthetase is an alternate name. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 360

>gnl|CDD|235655 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed

 Score =  189 bits (482), Expect = 1e-55
 Identities = 96/384 (25%), Positives = 177/384 (46%), Gaps = 32/384 (8%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
             +  +G  + ++G   +NFA+++YL    +P +   A     + G GS G R   G + 
Sbjct: 25  PREGGAGRWLVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSP 84

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR 185
            H  LE ++A + G E   L+S G++ + + + A   + D +  D+  + ++  G   SR
Sbjct: 85  AHEALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSR 144

Query: 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD--ICPLKDILSLR 243
            +V+ + HN++  LE LL +      L        I+ E V+  S D  + PL ++++L 
Sbjct: 145 ARVRRYPHNDVDALEALLAKWRAGRAL--------IVTESVF--SMDGDLAPLAELVALA 194

Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
            ++ A + VDE+   G LG  G G+    G++ E   +++G+L  ALGS G   +GS  +
Sbjct: 195 RRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSETL 254

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ 363
           I++       + F+ +LPP  A AA  AL +L+  P    +L            +  +  
Sbjct: 255 IDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAA-----LIARLRAGLRA 309

Query: 364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC---PSHLDQEAKKQ 420
                    + ++ L +  ++  +A    LQ       + GF +     P+     ++  
Sbjct: 310 LGFQLMDSQSAIQPLIVGDNERALALAAALQ-------EQGFWVGAIRPPTVPAGTSR-- 360

Query: 421 KPSIRITCNISHTEQDMNSLIETL 444
              +RIT   +HTE D++ L+E L
Sbjct: 361 ---LRITLTAAHTEADIDRLLEAL 381

Length = 385

>gnl|CDD|235893 PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

 Score =  173 bits (440), Expect = 2e-49
 Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 9/267 (3%)

Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142
           INF  +NYL    +P++   A   +D +G G    R   GT  +H +LE  +A F+G E+
Sbjct: 45  INFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED 104

Query: 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIASRCKVQYFKHNNMQHLEE 201
             LYS  F  +       + + DA+  D  +N A I  G+   + K   + +N+M  LE 
Sbjct: 105 AILYSSCFDANGGLFETLLGKEDAIISDA-LNHASIIDGVRLCKAKRYRYANNDMADLEA 163

Query: 202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL 261
            L++  E     +    K I  +GV+    DI PL +I  L  KY A + VD+S + G +
Sbjct: 164 QLKEAKE-----AGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFV 218

Query: 262 GSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSASL 320
           G  G G  E+FGV  + VD+I G+L  AL G+ GG+  G   +I+  R     Y FS SL
Sbjct: 219 GENGRGTVEHFGVM-DRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSL 277

Query: 321 PPFLAVAANKALHLLKANPSLLTKLRE 347
            P +  A+ K L LL+ +  L  +L E
Sbjct: 278 APAIVAASIKVLELLEESDELRDRLWE 304

Length = 397

>gnl|CDD|178101 PLN02483, PLN02483, serine palmitoyltransferase

 Score =  171 bits (435), Expect = 5e-48
 Identities = 92/341 (26%), Positives = 165/341 (48%), Gaps = 25/341 (7%)

Query: 50  PIVSKAEKFKDVSSKYVVDQKSGYIVNINGIP-CINFATHNYLSFVENPDIEKCA---ID 105
           PI S  + + DV  +   +  +  +        C+N  ++NYL F      E C    I+
Sbjct: 70  PIASAPDAWFDVVERVS-NDNNKTLKRTTKTRRCLNLGSYNYLGFAAAD--EYCTPRVIE 126

Query: 106 CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRND 165
            + K    +C  R   GT  +H +LE  +A F+G     ++  G++T+++ I A + +  
Sbjct: 127 SLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGG 186

Query: 166 AVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQ--DERDTLNSKVTKKFIIV 223
            +  D   + +I  G   S   ++ F+HN   HLEE+LR+Q  + +   +    K  +IV
Sbjct: 187 LIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIV 246

Query: 224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII 283
           EG+Y    ++C L +I+++  KY+A +++DE+ S G +G TG GV E  GV   +VD+++
Sbjct: 247 EGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMM 306

Query: 284 GSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA------ 337
           G+   + GS GG+  GS  +I++ + +   + ++ S+ P    A  + +  +K       
Sbjct: 307 GTFTKSFGSCGGYIAGSKELIQYLKRTCPAHLYATSMSP---PAVQQVISAIKVILGEDG 363

Query: 338 ---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL 375
                  L ++RE  N   S L        F V G  D+P+
Sbjct: 364 TNRGAQKLAQIRENSNFFRSEL----QKMGFEVLGDNDSPV 400

Length = 489

>gnl|CDD|130884 TIGR01825, gly_Cac_T_rel, pyridoxal phosphate-dependent acyltransferase, putative

 Score =  168 bits (427), Expect = 9e-48
 Identities = 86/280 (30%), Positives = 152/280 (54%), Gaps = 8/280 (2%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
           V++   G  V +NG   IN +++NYL F ++P +++ A   I + GVG+   R   GT  
Sbjct: 19  VLESAQGPRVRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLR 78

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR 185
           +H +LE  +A F   E   ++  GF+T+   ++A +++ D V  DE  + +I  GL  ++
Sbjct: 79  LHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTK 138

Query: 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245
              + +KH +M  L+ +LR+       N    KK I+ +GV+    D+ PL +I+ L  +
Sbjct: 139 ATKKIYKHADMDDLDRVLRE-------NPSYGKKLIVTDGVFSMDGDVAPLPEIVELAER 191

Query: 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE 305
           Y A  +VD++   G +G  G G   +FG+  ++VD+ +G+L  A+G VGG+  G   +IE
Sbjct: 192 YGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVGGYAAGHKELIE 250

Query: 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKL 345
           + +     + FS + PP +  A   A+  L+ +P L+ +L
Sbjct: 251 YLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERL 290

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions. Length = 385

>gnl|CDD|233587 TIGR01821, 5aminolev_synth, 5-aminolevulinic acid synthase

 Score =  158 bits (401), Expect = 6e-44
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 31/367 (8%)

Query: 82  CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE 141
           C N    +YL   ++P++ +   + +DK G G+ G R   GTN+ H++LE ++A   G E
Sbjct: 51  CSN----DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKE 106

Query: 142 ETALYSFGFSTSASAIAAYVKR--NDAVFVDE-NINFAIQTGLIASRCKVQYFKHNNMQH 198
              +++ G+  + + +A   K      +F DE N    I+ G+  S  +   F+HN++ H
Sbjct: 107 SALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIE-GIRHSGAEKFIFRHNDVAH 165

Query: 199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF 258
           LE+LL+  D           K I  E VY    DI P+++I  L  KY A  ++DE  + 
Sbjct: 166 LEKLLQSVDPN-------RPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAV 218

Query: 259 GTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSA 318
           G  G  G G+ E  G+    +D+I G+L  A G VGG+   S  +I+  R    G+ F+ 
Sbjct: 219 GLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFIFTT 277

Query: 319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL 378
           SLPP +A  A  ++  LK +  L    +E    + +LL    +            P   +
Sbjct: 278 SLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGIP-------VIPNPSHIV 330

Query: 379 YLQKSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCNISHTEQDM 437
            +   D  +  K     + D+ +     I   P +     +  +  +RIT   +HT++ +
Sbjct: 331 PVIIGDAALCKK-----VSDLLL-NKHGIYVQPINYPTVPRGTE-RLRITPTPAHTDKMI 383

Query: 438 NSLIETL 444
           + L+E L
Sbjct: 384 DDLVEAL 390

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 402

>gnl|CDD|130881 TIGR01822, 2am3keto_CoA, 2-amino-3-ketobutyrate coenzyme A ligase

 Score =  156 bits (397), Expect = 2e-43
 Identities = 91/290 (31%), Positives = 139/290 (47%), Gaps = 7/290 (2%)

Query: 62  SSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY 121
           S + +   +   I   +G   +NF  +NYL    +PD+ + A D +D++G G    R   
Sbjct: 20  SERIITSPQGADIRVADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFIC 79

Query: 122 GTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL 181
           GT  +H +LE  IA+F+G E+T LY+  F  +       +   DA+  D   + +I  G+
Sbjct: 80  GTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGV 139

Query: 182 IASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILS 241
              + K   + +N+M  LE  L++        +    + I  +GV+     I PL +I  
Sbjct: 140 RLCKAKRYRYANNDMADLEAQLKEARA-----AGARHRLIATDGVFSMDGVIAPLDEICD 194

Query: 242 LRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS 300
           L  KY A + VDE  + G LG TG G  E  GV    VD+I G+L  AL G+ GGF    
Sbjct: 195 LADKYDALVMVDECHATGFLGPTGRGSHELCGV-MGRVDIITGTLGKALGGASGGFTTAR 253

Query: 301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN 350
             ++E  R     Y FS SLPP +  A+ K L +L+A+  L  +L     
Sbjct: 254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTR 303

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function [Energy metabolism, Amino acids and amines]. Length = 393

>gnl|CDD|236370 PRK09064, PRK09064, 5-aminolevulinate synthase; Validated

 Score =  156 bits (398), Expect = 3e-43
 Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 18/281 (6%)

Query: 82  CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE 141
           C N    +YL   ++P + +  I+ +D+ G G+ G R   GTN  H++LE ++A   G E
Sbjct: 52  CSN----DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKE 107

Query: 142 ETALYSFGFS---TSASAIAAYVKRNDAVFVDE-NINFAIQTGLIASRCKVQYFKHNNMQ 197
              +++ G+     + S +A  +  +  +F DE N    I+ G+  SRC+   F+HN++ 
Sbjct: 108 AALVFTSGYVSNDATLSTLAKLI-PDCVIFSDELNHASMIE-GIRRSRCEKHIFRHNDVA 165

Query: 198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVS 257
           HLEELL   D           K I  E VY    DI P+ +I  L  KY A  ++DE  +
Sbjct: 166 HLEELLAAADPD-------RPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHA 218

Query: 258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFS 317
            G  G  G G+ E  G+  + +D+I G+L  A G +GG+  GS+ +++  R    G+ F+
Sbjct: 219 VGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIFT 277

Query: 318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ 358
            SLPP +A AA  ++  LK +     + +E+   + + L  
Sbjct: 278 TSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDA 318

Length = 407

>gnl|CDD|184023 PRK13392, PRK13392, 5-aminolevulinate synthase; Provisional

 Score =  138 bits (350), Expect = 1e-36
 Identities = 77/252 (30%), Positives = 129/252 (51%), Gaps = 10/252 (3%)

Query: 87  THNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY 146
           +++YL   ++PD+    +D +D+ G G+ G R   GT+  H+ LE ++A   G E   L+
Sbjct: 53  SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLF 112

Query: 147 SFGFSTSASAIAAYVKR--NDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR 204
           + G+ ++ +A++   K      +  D   + ++  G+  S  + Q F+HN++  LEE L 
Sbjct: 113 TSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLA 172

Query: 205 QQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGST 264
             D           K I  E VY    DI P++ I  L  +Y A  +VDE  + G  G+ 
Sbjct: 173 SVDPD-------RPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGAR 225

Query: 265 GHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFL 324
           G G+ E  G+  + +DMI G+L  A G +GG+   S+ +I+  R    G+ F+ +LPP +
Sbjct: 226 GGGIAERDGL-MDRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFIFTTALPPAV 284

Query: 325 AVAANKALHLLK 336
           A  A  A+  LK
Sbjct: 285 AAGATAAIRHLK 296

Length = 410

>gnl|CDD|184024 PRK13393, PRK13393, 5-aminolevulinate synthase; Provisional

 Score =  135 bits (342), Expect = 2e-35
 Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 12/275 (4%)

Query: 87  THNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY 146
           +++YL   ++P +     + +D  G G+ G R   GTN  H+ LE ++A   G E   L+
Sbjct: 52  SNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLF 111

Query: 147 SFGFSTSASAIAAYVKR--NDAVFVDE-NINFAIQTGLIASRCKVQYFKHNNMQHLEELL 203
           + G+ ++ +A++    R     +  DE N    I+ G+  SR + + F+HN+   LE  L
Sbjct: 112 TSGYVSNWAALSTLGSRLPGCVILSDELNHASMIE-GIRHSRAEKRIFRHNDPADLERKL 170

Query: 204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGS 263
              D           K +  E VY    DI P+ +I  +  K+ A  ++DE  + G  G 
Sbjct: 171 SDLD-------PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGP 223

Query: 264 TGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPF 323
            G G+ E  G++ + + +I G+L  A G +GG+  GS+ + +  R   SG+ F+ SLPP 
Sbjct: 224 RGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGFIFTTSLPPA 282

Query: 324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ 358
           +A  A  ++  LKA+ +   + +++   + + L +
Sbjct: 283 VAAGALASVRHLKASSAERERHQDRVARLRARLDK 317

Length = 406

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  104 bits (262), Expect = 8e-25
 Identities = 72/396 (18%), Positives = 139/396 (35%), Gaps = 70/396 (17%)

Query: 80  IPCINFATHNYLSFVE-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM 138
              IN  ++ YL      P + K   D        + G R  YG      +L   +A F+
Sbjct: 1   TDKINLGSNEYLGDSGTLPAVAKAEKD------ALAGGTRNLYGPTDGLPELREALAKFL 54

Query: 139 GLEE--------TALYSFGFSTSASAIAAYVKRN--DAVFVDENINFA-IQTGLIASRCK 187
           G             ++  G   +  A+   ++ N  DA+ V     +         +  +
Sbjct: 55  GRSPVLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVP-APTYPSYIRIFRLAGGE 113

Query: 188 VQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LK 237
           V  +        H +   LE  L++  E +        K ++    +  +  +     L+
Sbjct: 114 VVRYPLYSSNDFHLDFDALEAALKEATEGN--------KVVLHTSPHNPTGTVATLEELE 165

Query: 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--- 294
            +L L  ++   + VDE+ +    GS     T    ++     +++GS   A G  G   
Sbjct: 166 KLLDLAKEHNILLLVDEAYAGFVFGSLDAVAT-RALLAEGPNLLVVGSFSKAFGLAGWRV 224

Query: 295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS 354
           G+ +G++ +I   R     +  S  L    A A +  L +      +  +++E+ + +  
Sbjct: 225 GYILGNAAVISQLRKLARPFYSSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRD 284

Query: 355 LLS----QHKVTQR--FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAIT 408
            L         +Q   FL+ G    P   L L        ++ LL+       + G  +T
Sbjct: 285 GLEAAGLSVLPSQAGFFLLTGLD--PEAALAL--------AQVLLE-------EVGVYVT 327

Query: 409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
             S            +RIT     TE+++  L+E +
Sbjct: 328 PGSSF-----GGPGWLRITVA-GGTEEELEELLEAI 357

Length = 357

>gnl|CDD|180866 PRK07179, PRK07179, hypothetical protein; Provisional

 Score = 94.7 bits (236), Expect = 4e-21
 Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 11/255 (4%)

Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142
           I   +++YL+   +PDI K  I  + + G        F   +      E  +A+F G E 
Sbjct: 57  IILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES 116

Query: 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEEL 202
             L   G++ +   +      N  V++D   + ++  G+ A+  +   F+HN++ HL   
Sbjct: 117 CLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQ 176

Query: 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG 262
           + +               I+V+ VY  +  I PL DI+ +  ++   + VDES S GT G
Sbjct: 177 IERHG----------PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG 226

Query: 263 STGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPP 322
             G G+    G+ T  V  I  SL  A     G       + E+         FS++L P
Sbjct: 227 PQGAGLVAELGL-TSRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFSSTLLP 285

Query: 323 FLAVAANKALHLLKA 337
                    L ++++
Sbjct: 286 HEIAGLEATLEVIES 300

Length = 407

>gnl|CDD|102071 PRK05937, PRK05937, 8-amino-7-oxononanoate synthase; Provisional

 Score = 93.7 bits (233), Expect = 5e-21
 Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 17/273 (6%)

Query: 83  INFATHNYLSFVENPDIEKCAID------CIDKN--GVGSCGPRGFYGTNVVHLDLENDI 134
           I+F T+++L F  +  +    ++      C       +G  G R   G + +  DLE+ I
Sbjct: 7   IDFVTNDFLGFSRSDTL-VHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKI 65

Query: 135 ASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN 194
           A F G  E  +   G+  +    A      D V  DE ++ ++   L       Q F+HN
Sbjct: 66  AHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHN 125

Query: 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDE 254
           ++ HLE LL  +  R     ++   FI V  VY     + PL+ I++L  KY A + VDE
Sbjct: 126 DLDHLESLL--ESCRQRSFGRI---FIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDE 180

Query: 255 SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGY 314
           + + G  G  G G     G   E    ++ +   ALGS+G   + SS + +   L+    
Sbjct: 181 AHAMGIFGDDGKGFCHSLGY--ENFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSPPL 238

Query: 315 CFSASLPPFLAVAANKAL-HLLKANPSLLTKLR 346
            +S  LPP L ++   A   L +       +L 
Sbjct: 239 RYSTGLPPHLLISIQVAYDFLSQEGELARKQLF 271

Length = 370

>gnl|CDD|178541 PLN02955, PLN02955, 8-amino-7-oxononanoate synthase

 Score = 80.5 bits (198), Expect = 3e-16
 Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 27/266 (10%)

Query: 85  FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETA 144
           F+ ++YL    +P I   A +   + G+G  G     G    H  LE+ +A     E+  
Sbjct: 107 FSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCL 166

Query: 145 LYSFGFSTS----------ASAIAAYVK--RND--AVFVDENINFAIQTGL-IASR---C 186
           +   GF+ +          AS +AA  K  +N+  A+F D   + +I  G+ +A R    
Sbjct: 167 VCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNV 226

Query: 187 KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY 246
           +V  ++H +M HL  LL         + K+ +K ++ + ++    D  P++++  LR KY
Sbjct: 227 EVFVYRHCDMYHLNSLLS--------SCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKY 278

Query: 247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH 306
              + +D++      G  G GV E F     +VD+ +G+L  A G  GGF   S    + 
Sbjct: 279 GFLLVIDDAHGTFVCGENGGGVAEEFNCEA-DVDLCVGTLSKAAGCHGGFIACSKKWKQL 337

Query: 307 HRLSGSGYCFSASLPPFLAVAANKAL 332
            +  G  + FS ++P  +A AA  A+
Sbjct: 338 IQSRGRSFIFSTAIPVPMAAAAYAAV 363

Length = 476

>gnl|CDD|181006 PRK07505, PRK07505, hypothetical protein; Provisional

 Score = 65.8 bits (161), Expect = 1e-11
 Identities = 92/404 (22%), Positives = 153/404 (37%), Gaps = 65/404 (16%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV-GSCGPRGFYGTN 124
           V +++   I   +G   +NF + +YL    +P I + A+D + + G       R      
Sbjct: 32  VGEREGILITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRT--RVR 89

Query: 125 VVHL-DLENDIASFMGLEETALYSFGFSTSASAIAA--------YVKRNDAVFV-DENIN 174
              L DLE  ++   G    A      S SA+ +                   V D+N +
Sbjct: 90  SQILKDLEEALSELFG----ASVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAH 145

Query: 175 FAIQ--TGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSA 231
            ++    G+ A   +V+   HN++  LE++ +                 + +GVY M   
Sbjct: 146 ASLNILKGICADETEVETIDHNDLDALEDICKTNK----------TVAYVADGVYSMG-- 193

Query: 232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHAL 290
            I P+K++L L+ KY   +++D++      G  G G V         E  +I  SL  A 
Sbjct: 194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAF 253

Query: 291 GSVGGFC-VGSSYIIEHHRLSGSGYCFSASL--PPFLAVAANKALHLLKANPSLLTKLRE 347
           G+ GG   +G +  IE          FS SL      A+ A+  +HL +    L  KL+ 
Sbjct: 254 GASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQN 313

Query: 348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV-ASKKLLQTICDMCIQAGFA 406
                 SL+           Q     P++ +Y+   D  + A+K+LL          GF 
Sbjct: 314 NIALFDSLIPTE--------QSGSFLPIRLIYIGDEDTAIKAAKQLL--------DRGFY 357

Query: 407 ITC---PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447
            +    P        K +  +RI    SHT  +    I+ LC  
Sbjct: 358 TSPVFFPV-----VAKGRAGLRIMFRASHTNDE----IKRLCSL 392

Length = 402

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	457
PLN02822	481	serine palmitoyltransferase	100.0
KOG1358|consensus	467		100.0
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	100.0
PLN02955	476	8-amino-7-oxononanoate synthase	100.0
KOG1359|consensus	417		100.0
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	100.0
PRK13393	406	5-aminolevulinate synthase; Provisional	100.0
KOG1360|consensus	570		100.0
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	100.0
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	100.0
PRK09064	407	5-aminolevulinate synthase; Validated	100.0
PLN02483	489	serine palmitoyltransferase	100.0
PRK13392	410	5-aminolevulinate synthase; Provisional	100.0
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	100.0
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	100.0
PRK07179	407	hypothetical protein; Provisional	100.0
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	100.0
KOG1357|consensus	519		100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	100.0
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	100.0
PLN02760	504	4-aminobutyrate:pyruvate transaminase	100.0
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	100.0
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	100.0
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	100.0
PRK12403	460	putative aminotransferase; Provisional	100.0
PRK07505	402	hypothetical protein; Provisional	100.0
PRK03715	395	argD acetylornithine transaminase protein; Provisi	100.0
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	100.0
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	100.0
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	100.0
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	100.0
PRK07482	461	hypothetical protein; Provisional	100.0
KOG1402|consensus	427		100.0
PRK06062	451	hypothetical protein; Provisional	100.0
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06105	460	aminotransferase; Provisional	100.0
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	100.0
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	100.0
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	100.0
PRK05965	459	hypothetical protein; Provisional	100.0
PRK06541	460	hypothetical protein; Provisional	100.0
PRK07678	451	aminotransferase; Validated	100.0
PLN02624	474	ornithine-delta-aminotransferase	100.0
PRK07481	449	hypothetical protein; Provisional	100.0
PRK07046	453	aminotransferase; Validated	100.0
KOG1404|consensus	442		100.0
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	100.0
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	100.0
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	100.0
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	100.0
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	100.0
PRK07480	456	putative aminotransferase; Validated	100.0
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	100.0
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	100.0
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
PRK07036	466	hypothetical protein; Provisional	100.0
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	100.0
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK04612	408	argD acetylornithine transaminase protein; Provisi	100.0
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	100.0
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	100.0
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	100.0
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PLN00144	382	acetylornithine transaminase	100.0
PRK07483	443	hypothetical protein; Provisional	100.0
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	100.0
PRK02936	377	argD acetylornithine aminotransferase; Provisional	100.0
PRK06149	972	hypothetical protein; Provisional	100.0
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06917	447	hypothetical protein; Provisional	100.0
PTZ00125	400	ornithine aminotransferase-like protein; Provision	100.0
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	100.0
PRK08297	443	L-lysine aminotransferase; Provisional	100.0
PRK09792	421	4-aminobutyrate transaminase; Provisional	100.0
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	100.0
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	100.0
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	100.0
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	100.0
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	100.0
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	100.0
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	100.0
PRK06148	1013	hypothetical protein; Provisional	100.0
KOG1401|consensus	433		100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	100.0
PRK04260	375	acetylornithine aminotransferase; Provisional	100.0
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	100.0
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	100.0
PRK08088	425	4-aminobutyrate aminotransferase; Validated	100.0
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	100.0
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	100.0
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	100.0
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	100.0
PRK13034	416	serine hydroxymethyltransferase; Reviewed	100.0
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	100.0
KOG1403|consensus	452		99.98
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.97
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.97
PRK06108	382	aspartate aminotransferase; Provisional	99.97
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.97
PRK06207	405	aspartate aminotransferase; Provisional	99.97
PLN00175	413	aminotransferase family protein; Provisional	99.97
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.97
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.97
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.97
PRK07681	399	aspartate aminotransferase; Provisional	99.97
PRK06290	410	aspartate aminotransferase; Provisional	99.97
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.97
PRK07682	378	hypothetical protein; Validated	99.97
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.96
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.96
PRK09082	386	methionine aminotransferase; Validated	99.96
PLN02721	353	threonine aldolase	99.96
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.96
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.96
PRK05764	393	aspartate aminotransferase; Provisional	99.96
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.96
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.96
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.96
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.96
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.96
PRK06225	380	aspartate aminotransferase; Provisional	99.96
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.96
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.96
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.96
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.96
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.96
PRK08068	389	transaminase; Reviewed	99.96
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.96
PRK07324	373	transaminase; Validated	99.96
PRK12414	384	putative aminotransferase; Provisional	99.96
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.96
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.96
PRK05957	389	aspartate aminotransferase; Provisional	99.96
PRK09148	405	aminotransferase; Validated	99.96
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.96
PRK08912	387	hypothetical protein; Provisional	99.96
PRK06348	384	aspartate aminotransferase; Provisional	99.96
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.96
PRK02948	381	cysteine desulfurase; Provisional	99.96
PRK07777	387	aminotransferase; Validated	99.96
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.96
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.96
PRK10534	333	L-threonine aldolase; Provisional	99.96
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.96
PRK08361	391	aspartate aminotransferase; Provisional	99.96
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.96
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.95
PRK05942	394	aspartate aminotransferase; Provisional	99.95
PRK08960	387	hypothetical protein; Provisional	99.95
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.95
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.95
PRK08175	395	aminotransferase; Validated	99.95
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.95
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.95
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.95
PRK08636	403	aspartate aminotransferase; Provisional	99.95
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.95
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.95
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.95
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.95
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.95
PTZ00377	481	alanine aminotransferase; Provisional	99.95
PRK07550	386	hypothetical protein; Provisional	99.95
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.95
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.95
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.95
PRK07683	387	aminotransferase A; Validated	99.95
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.95
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.95
PTZ00433	412	tyrosine aminotransferase; Provisional	99.95
PRK03321	352	putative aminotransferase; Provisional	99.95
PRK06107	402	aspartate aminotransferase; Provisional	99.95
PRK08363	398	alanine aminotransferase; Validated	99.95
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.95
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.95
PLN02187	462	rooty/superroot1	99.95
KOG0257|consensus	420		99.95
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.95
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.95
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.95
PLN02656	409	tyrosine transaminase	99.95
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.95
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.95
PRK07568	397	aspartate aminotransferase; Provisional	99.94
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.94
PRK09105	370	putative aminotransferase; Provisional	99.94
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.94
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.94
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.94
PRK09265	404	aminotransferase AlaT; Validated	99.94
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.94
PRK06855	433	aminotransferase; Validated	99.94
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.94
PRK07337	388	aminotransferase; Validated	99.94
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.94
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.94
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.94
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.94
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.94
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.94
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.94
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.94
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.94
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.94
PRK06234	400	methionine gamma-lyase; Provisional	99.94
PLN02672	1082	methionine S-methyltransferase	99.94
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.94
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.94
PRK06767	386	methionine gamma-lyase; Provisional	99.94
PRK05839	374	hypothetical protein; Provisional	99.94
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.93
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.93
PLN02242	418	methionine gamma-lyase	99.93
PRK06836	394	aspartate aminotransferase; Provisional	99.93
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.93
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.93
PLN02409	401	serine--glyoxylate aminotransaminase	99.93
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.93
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.93
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.93
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.93
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.93
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.93
PRK05968	389	hypothetical protein; Provisional	99.93
PRK07908	349	hypothetical protein; Provisional	99.93
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.93
PRK08249	398	cystathionine gamma-synthase; Provisional	99.93
PRK14012	404	cysteine desulfurase; Provisional	99.93
PRK08354	311	putative aminotransferase; Provisional	99.93
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.93
PLN02651	364	cysteine desulfurase	99.92
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.92
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.92
PLN02231	534	alanine transaminase	99.92
PTZ00376	404	aspartate aminotransferase; Provisional	99.92
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.92
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.92
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.92
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.92
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.92
PRK08574	385	cystathionine gamma-synthase; Provisional	99.92
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.92
PRK07503	403	methionine gamma-lyase; Provisional	99.92
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.92
PRK06460	376	hypothetical protein; Provisional	99.91
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.91
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.91
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.91
PRK07811	388	cystathionine gamma-synthase; Provisional	99.91
PRK08114	395	cystathionine beta-lyase; Provisional	99.91
PRK08861	388	cystathionine gamma-synthase; Provisional	99.91
KOG1368|consensus	384		99.91
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.91
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.91
PRK09028	394	cystathionine beta-lyase; Provisional	99.91
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.91
PLN02397	423	aspartate transaminase	99.9
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.9
PLN02509	464	cystathionine beta-lyase	99.9
PRK08776	405	cystathionine gamma-synthase; Provisional	99.9
PRK07050	394	cystathionine beta-lyase; Provisional	99.9
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.9
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.9
PRK07049	427	methionine gamma-lyase; Validated	99.9
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.9
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.9
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.9
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.9
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK08045	386	cystathionine gamma-synthase; Provisional	99.9
PRK08064	390	cystathionine beta-lyase; Provisional	99.9
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.9
PRK05939	397	hypothetical protein; Provisional	99.89
PRK05967	395	cystathionine beta-lyase; Provisional	99.89
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.89
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.89
PRK09275	527	aspartate aminotransferase; Provisional	99.89
PRK08637	388	hypothetical protein; Provisional	99.89
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.89
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.89
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.89
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.89
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.88
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.88
KOG0259|consensus	447		99.88
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.88
PRK07671	377	cystathionine beta-lyase; Provisional	99.88
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.88
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.88
PLN02368	407	alanine transaminase	99.88
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.88
PRK07582	366	cystathionine gamma-lyase; Validated	99.88
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.88
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.87
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.87
PRK02769	380	histidine decarboxylase; Provisional	99.87
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.87
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.87
KOG1405|consensus	484		99.86
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.86
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.86
PLN02271	586	serine hydroxymethyltransferase	99.86
KOG0634|consensus	472		99.85
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.85
PRK03080	378	phosphoserine aminotransferase; Provisional	99.85
PLN03032	374	serine decarboxylase; Provisional	99.85
PLN02724	805	Molybdenum cofactor sulfurase	99.85
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.84
PRK06434	384	cystathionine gamma-lyase; Validated	99.83
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.82
PRK15029	755	arginine decarboxylase; Provisional	99.82
KOG1549|consensus	428		99.82
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.82
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.82
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.82
PRK04311	464	selenocysteine synthase; Provisional	99.81
KOG0256|consensus	471		99.81
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.81
PLN02880	490	tyrosine decarboxylase	99.81
PLN02590	539	probable tyrosine decarboxylase	99.81
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.81
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.81
KOG0053|consensus	409		99.8
PRK05367	954	glycine dehydrogenase; Provisional	99.79
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.79
PRK13237	460	tyrosine phenol-lyase; Provisional	99.79
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.79
PLN02263	470	serine decarboxylase	99.79
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.79
PRK12566	954	glycine dehydrogenase; Provisional	99.78
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.77
PRK15400	714	lysine decarboxylase CadA; Provisional	99.77
PRK13578	720	ornithine decarboxylase; Provisional	99.77
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.75
KOG0633|consensus	375		99.71
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.71
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.71
KOG2862|consensus	385		99.7
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.7
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.69
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.67
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.67
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.66
PLN02452	365	phosphoserine transaminase	99.64
PRK05367	954	glycine dehydrogenase; Provisional	99.64
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.64
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.62
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.59
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.57
PRK12462	364	phosphoserine aminotransferase; Provisional	99.49
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.46
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.46
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.41
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.41
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.4
KOG2467|consensus	477		99.4
KOG0258|consensus	475		99.33
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	99.33
KOG1383|consensus	491		99.31
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	99.27
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.27
KOG0629|consensus	510		99.22
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.16
PRK12566	954	glycine dehydrogenase; Provisional	99.11
KOG2040|consensus	1001		99.09
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.06
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	99.01
KOG3846|consensus	465		98.93
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	98.8
COG4100	416	Cystathionine beta-lyase family protein involved i	98.72
KOG0628|consensus	511		98.71
KOG1412|consensus	410		98.25
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	98.17
KOG2040|consensus	1001		97.96
KOG3843|consensus	432		97.77
KOG1411|consensus	427		97.55
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	95.31
KOG2790|consensus	370		95.28

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=9.1e-65  Score=510.44  Aligned_cols=430  Identities=38%  Similarity=0.660  Sum_probs=369.4

Q ss_pred             HHHHHHHH---hhcccc--CCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccC
Q psy15447         18 PLTLFIVL---SLSLSK--HKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLS   92 (457)
Q Consensus        18 ~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~   92 (457)
                      +|++|+++   .++|+.  .+.+++|+|+++++|+|+|++++.+...+ ..++++.+++|+++++||++|+||++++|++
T Consensus        43 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~l~~~~~~~~~-~~~~~~~~~~G~~i~~~G~~~id~~s~~~lg  121 (481)
T PLN02822         43 LLIVVIVFLLSQKSYKPPKRPLTEKEIDELCDEWTPEPLIPPITEEMR-PEPPVLESAAGPHTIINGKDVVNFASANYLG  121 (481)
T ss_pred             HHHHHHHHHHHcCcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCchhcc-ccCCceecCCCCeEEECCceEEEeECCCcCC
Confidence            34444444   444442  23479999999999999999998666544 3566899999999999999999999999999


Q ss_pred             CCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447         93 FVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDEN  172 (457)
Q Consensus        93 ~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~  172 (457)
                      +.+||++++++.+++++||+++|+++.+||+.+.+.+|+++|++++|.++++++++|+.++.+++++++++||.|+++..
T Consensus       122 l~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~  201 (481)
T PLN02822        122 LIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEG  201 (481)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCC
Confidence            99999999999999999999999999999999999999999999999998999999998999999999999999999999


Q ss_pred             ccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447        173 INFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV  252 (457)
Q Consensus       173 ~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~  252 (457)
                      +|.++..++.+++.++++++|||+++++..+++...+.... +..+++|++|++++++|.+.|+++|+++|++||++||+
T Consensus       202 ~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~-~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIv  280 (481)
T PLN02822        202 VHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRK-KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLL  280 (481)
T ss_pred             ccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhccc-CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEE
Confidence            99999999999999999999999999999887654321110 12347999999999999999999999999999999999


Q ss_pred             EcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      ||+|++|.+|++|+|..+++++.+.++||+++||||++|+.|||++++++++++++....+++|+++.||+.+++++++|
T Consensus       281 DEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL  360 (481)
T PLN02822        281 DESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAI  360 (481)
T ss_pred             ECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHH
Confidence            99999999999999999999997667899999999999999999999999999998888889999888999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-HcCeeEecc
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QAGFAITCP  410 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~Gi~v~~~  410 (457)
                      +.+++.++++++++++++++++.|++   ..|+++..+..++++++.+++.... +.+.....+++++|+ ++||++.+.
T Consensus       361 ~~l~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~  437 (481)
T PLN02822        361 DVLEDNPSVLAKLKENIALLHKGLSD---IPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVS  437 (481)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHHh---cCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEee
Confidence            98876677899999999999999988   4577776667899999988642110 111224578999998 779999987


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+|.......+..+|++++..+|++||++++++|++++..+-
T Consensus       438 ~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~  479 (481)
T PLN02822        438 KRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL  479 (481)
T ss_pred             CCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence            765432222346799999999999999999999999887654

>KOG1358|consensus

Probab=100.00  E-value=5.2e-65  Score=464.26  Aligned_cols=414  Identities=46%  Similarity=0.785  Sum_probs=382.3

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS  114 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~  114 (457)
                      +++|+|+++++|.|+|++++.++.++..+++++++.-+.++++||++++||+|+||+++..++++++.+...+++||+|.
T Consensus        49 t~~eideLiedw~PEPLV~~~~~~~~~~~~~v~e~~~~~~~~i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGs  128 (467)
T KOG1358|consen   49 TEQEIDELIEDWEPEPLVPPVPEDHPVLNTPVLESVMLPHVTIDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGS  128 (467)
T ss_pred             CHHHHHHHHhcCCCCCCCCCCcccccccCCcccccccCCceEecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCC
Confidence            59999999999999999999998888888999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC
Q psy15447        115 CGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN  194 (457)
Q Consensus       115 ~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~  194 (457)
                      ||+|.|||+.+.|.+|+++||+++|.+.+++++.|+.++.++|++++++||+|++++..+.++..|+++++.++..|.||
T Consensus       129 CGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn  208 (467)
T KOG1358|consen  129 CGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN  208 (467)
T ss_pred             cCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHhhchhcccCCC--CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447        195 NMQHLEELLRQQDERDTLNSK--VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       195 d~~~le~~l~~~~~~~~~~~~--~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                      |++++|+.+.+...+++++|+  ..+++|++|+++.++|.++|+++|.++..||...+|+||.+++|.+|++|+|.++|+
T Consensus       209 dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~  288 (467)
T KOG1358|consen  209 DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHF  288 (467)
T ss_pred             CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccC
Confidence            999999999887766666553  347899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      ++++.++|++++|+.-+++..||||+|+..++++++..+.+|+||.+.||+.+.++..++.+++.+++..+.++++...+
T Consensus       289 ~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~  368 (467)
T KOG1358|consen  289 GVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKF  368 (467)
T ss_pred             CCCccceeeeeecccccccccCceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhcccccc
Confidence            99989999999999999999999999999999999999999999999999999999999999999988999999999999


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI  430 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~  430 (457)
                      ++.|+.   ..++.+.+++.+|++.+.+.....+ +.+....+++++.+..+|+++....+... +..+.++.+||+++.
T Consensus       369 H~~l~~---~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a  445 (467)
T KOG1358|consen  369 HAALSS---NSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSA  445 (467)
T ss_pred             chhhhc---CCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeC
Confidence            999987   5788999889999999998875433 45556778899999988999987765422 334456799999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHh
Q psy15447        431 SHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .++++|++++.+.|+++...+
T Consensus       446 ~~seeel~ra~~~ik~~~~~~  466 (467)
T KOG1358|consen  446 GMSEEELERAAELIKEVASAV  466 (467)
T ss_pred             CCCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999887543

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=100.00  E-value=8e-64  Score=478.84  Aligned_cols=362  Identities=34%  Similarity=0.594  Sum_probs=338.4

Q ss_pred             eecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447         67 VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY  146 (457)
Q Consensus        67 i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~  146 (457)
                      +.+..+..++.+|++++||+||+|||++.||++++++.+++++||.+.+++|..+|+.+.|.+||++||+|+|.+.+++|
T Consensus        26 ~~~~~~~~~~~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f  105 (388)
T COG0156          26 LDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLF  105 (388)
T ss_pred             ccccCCcceecCCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEE
Confidence            44444667777899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      +||+.||..++.++++++|.|+.|+..|.++++++++++++++.|+|||+++||+.+++...    .+. ++++|++|++
T Consensus       106 ~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~----~~~-~~~~IvtegV  180 (388)
T COG0156         106 SSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARE----NGA-RRKLIVTEGV  180 (388)
T ss_pred             cccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhc----cCC-CceEEEEecc
Confidence            99999999999999999999999999999999999999999999999999999999987431    112 5789999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH  306 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~  306 (457)
                      ++|.|++.||++|+++|++||++|++||+|+.|++|++|+|+++++|+.+.++||+++||+|+||..|||++++..++++
T Consensus       181 fSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~  260 (388)
T COG0156         181 FSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDY  260 (388)
T ss_pred             ccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      +++.+.++.|++++||..++++.++++++++.++++++++++..++++.++.    .++.+ .+..++++++.++++.  
T Consensus       261 L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~----~~~~~-~~s~s~I~pv~~gd~~--  333 (388)
T COG0156         261 LRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA----LGLVL-LPSESPIIPVILGDEE--  333 (388)
T ss_pred             HHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh----cCCcc-CCCCCCeeeeEeCCHH--
Confidence            9999999999999999999999999999998889999999999999977766    56665 3678999999999876  


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                           .+..+...|+++||++.+..+|.+  |.+..++|++++..||++||+++++++.++
T Consensus       334 -----~a~~~s~~l~~~Gi~v~~i~~PTV--p~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         334 -----RALEASRALLEEGIYVSAIRPPTV--PKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             -----HHHHHHHHHHHCCeeEeeecCCCC--CCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence                 788899999999999999999988  777899999999999999999999999865

>PLN02955 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=1.1e-56  Score=438.94  Aligned_cols=347  Identities=22%  Similarity=0.374  Sum_probs=319.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      .+++++||+||+|||+..||++++++.+++++||.++++++.+.|+...+.+||++||+++|.+.+++++||+.||..++
T Consensus       100 ~~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i  179 (476)
T PLN02955        100 RFKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANMAAM  179 (476)
T ss_pred             CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHHHHH
Confidence            45899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhh--------------cCCCCEEEEeCcccHHHHHHHHhc----CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        158 AAY--------------VKRNDAVFVDENINFAIQTGLIAS----RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       158 ~a~--------------~~~gd~v~~~~~~h~~~~~~~~~~----g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      .++              .++++.|+.|...|.+++.+++++    ++++..|+|||+++|++++++..        ...+
T Consensus       180 ~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~--------~~~~  251 (476)
T PLN02955        180 VAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCK--------MKRK  251 (476)
T ss_pred             HHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCC--------CCce
Confidence            887              357789999999999999999998    57889999999999999998754        3457


Q ss_pred             EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEe
Q psy15447        220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVG  299 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~  299 (457)
                      +|++|+++++.|.+.|+++|+++|++||++||+||+|++|++|++|+|..+++|+. .++||+++||+|++|..|||+++
T Consensus       252 ~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~GGfi~g  330 (476)
T PLN02955        252 VVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHGGFIAC  330 (476)
T ss_pred             EEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccCceeec
Confidence            99999999999999999999999999999999999999999999999999999997 57889999999999999999999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      ++++++.++..+.++.|+++.||..+++++++++.+...++++++++++.++|++.       .|+++    .+|++++.
T Consensus       331 s~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~-------~G~~~----~sPI~pI~  399 (476)
T PLN02955        331 SKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL-------SGVDI----SSPIISLV  399 (476)
T ss_pred             HHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-------cCCCC----CCCEEEEE
Confidence            99999999998999999999999999999999999887777889999999999873       24332    48999999


Q ss_pred             ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++++.       .+..+.++|+++||++.+..||.+  |.+..++||+++..||++||++++++|.++.+....
T Consensus       400 ig~~~-------~a~~~~~~L~~~Gi~v~~i~yPtV--P~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~  464 (476)
T PLN02955        400 VGNQE-------KALKASRYLLKSGFHVMAIRPPTV--PPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNT  464 (476)
T ss_pred             eCCHH-------HHHHHHHHHHHCCCEEEEECCCCC--CCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            98875       778899999999999999999987  777789999999999999999999999998776643

>KOG1359|consensus

Probab=100.00  E-value=7.2e-54  Score=377.16  Aligned_cols=362  Identities=30%  Similarity=0.489  Sum_probs=334.8

Q ss_pred             ceeeecCCCcEEEECC--eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC
Q psy15447         64 KYVVDQKSGYIVNING--IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE  141 (457)
Q Consensus        64 ~~~i~~~~g~~~~~~G--~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~  141 (457)
                      -.++.+.+|.++.++|  +++|||++|||+|++.||+|.+|..+++++||.+..+.++.-|+.+.|..||.++|++.+.|
T Consensus        49 erVi~s~q~p~i~v~G~~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rE  128 (417)
T KOG1359|consen   49 ERVITSRQGPTIQVKGSDKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRE  128 (417)
T ss_pred             eeEEeecccceEEEeccccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCC
Confidence            4688899999999877  79999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +++++.+++.||..++.++..+.|.|+.|+..|.++.++++++.    ++.|.|+-+++..+.+...       .+.++|
T Consensus       129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k-------~r~klv  197 (417)
T KOG1359|consen  129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACK-------MRLKLV  197 (417)
T ss_pred             ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhh-------heEEEE
Confidence            99999999999999999999999999999999999999999976    6677899999988876542       577899


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~  300 (457)
                      ++++++++.|.+.|+++|.+|++|||+++++||+|+.|.+|++|+|..+.+|+. .++||+.+|++|++| ..|||..++
T Consensus       198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp  276 (417)
T KOG1359|consen  198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGP  276 (417)
T ss_pred             EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCC
Confidence            999999999999999999999999999999999999999999999999999986 689999999999997 578999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +.+++.++..+.+|.|+.+.||.....+.++++.+-.......+.+.+.++|++.++.    .|+.+.+ ...|+.++.+
T Consensus       277 ~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~----aGftIsg-~~hPI~pv~l  351 (417)
T KOG1359|consen  277 KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEA----AGFTISG-ASHPICPVML  351 (417)
T ss_pred             hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh----cCceecC-CCCCccceec
Confidence            9999999999999999999999888888889888877667888999999999999988    8999864 3479999999


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++..       .+.++++.|+++||+|-...||.+  |+++.++|+.++..||+||||++++++.++.+..
T Consensus       352 Gda~-------lA~~~ad~lLk~Gi~Vigfs~PvV--P~gkariRVqiSAaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359|consen  352 GDAR-------LASKMADELLKRGIYVIGFSYPVV--PKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             ccHH-------HHHHHHHHHHhcCceEEeecCCcC--CCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence            9876       888999999999999999999987  8888899999999999999999999999887654

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=100.00  E-value=3.9e-50  Score=399.88  Aligned_cols=354  Identities=27%  Similarity=0.461  Sum_probs=307.7

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      +|++++||+||+|+|++.||++++|+.+++++|+.++++++..+|+.+.+.+|++++++++|.+.+++++||++|+..++
T Consensus        43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai  122 (402)
T TIGR01821        43 GAKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL  122 (402)
T ss_pred             CCeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence            46999999999999999999999999999999999888899888999999999999999999999999999999999999


Q ss_pred             HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      +.+.+  +++.|+.+..+|.+...++...+.++..++++|++++++.++...       ++++++|++|+++|++|.+.|
T Consensus       123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~~e~~~~~~G~~~~  195 (402)
T TIGR01821       123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSVD-------PNRPKIIAFESVYSMDGDIAP  195 (402)
T ss_pred             HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhcc-------CCCCeEEEEcCCCCCCCCccC
Confidence            98765  788999998899999999999999888899999999999997532       135689999999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      +++|+++|++||++||+||+|++|.+|+.|.|..+++++. +++||+++||+|++|+.|||+++++++++.++....++.
T Consensus       196 l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~~~  274 (402)
T TIGR01821       196 IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPGFI  274 (402)
T ss_pred             HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcCce
Confidence            9999999999999999999999999998888877666764 456899999999999999999999999999887666677


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      |+++.+|..+++++++++.+++.+.+.++++++.+++++.|++    .|+++. .+.++++++.++...       .+.+
T Consensus       275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~i~~i~~~~~~-------~a~~  342 (402)
T TIGR01821       275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEA----LGIPVI-PNPSHIVPVIIGDAA-------LCKK  342 (402)
T ss_pred             ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCEEEEEeCCHH-------HHHH
Confidence            8888899999999999999877666777888999999999988    566654 346778877665422       4567


Q ss_pred             HHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        396 ICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       396 ~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +.+.|++ +||++++..+|..  +.+.+++||+++..+|++|+++++++|+++++++.-
T Consensus       343 ~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~  399 (402)
T TIGR01821       343 VSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL  399 (402)
T ss_pred             HHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence            8888875 5999998777644  334578999999999999999999999999887643

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=4.5e-50  Score=399.56  Aligned_cols=352  Identities=24%  Similarity=0.397  Sum_probs=306.2

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      +|+++++|+||+|||+..||+|++++.++++++++++++++..+++.+.+.+|+++|++++|.+.+++++||++|+..++
T Consensus        43 ~~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai  122 (406)
T PRK13393         43 GPREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL  122 (406)
T ss_pred             CCccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence            35899999999999999999999999999999999888888888888899999999999999999999999999999999


Q ss_pred             HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      +++.+  +++.|+.+..+|+++..+++..+.++..++++|++++++.++...       ++++++|++|++++++|.+.|
T Consensus       123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~~~~v~~~~G~~~~  195 (406)
T PRK13393        123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLD-------PHRPKLVAFESVYSMDGDIAP  195 (406)
T ss_pred             HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhcc-------CCCCEEEEEcCCCCCCCchhC
Confidence            97665  789999999999999999999999888999999999999887542       135679999999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      +++|+++|++||+++|+||+|++|.+|++|.++.++.++. +++||+++||+|++|..|||+++++++++.++....++.
T Consensus       196 l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~~~  274 (406)
T PRK13393        196 IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASGFI  274 (406)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcCce
Confidence            9999999999999999999999998999988877777775 356899999999999999999999999999887776777


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      ++++.+|..++++.++++.+++....+++++++.+++++.|++    .++++. ++.++++++.+.+..       ...+
T Consensus       275 ~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~i~~v~~~~~~-------~~~~  342 (406)
T PRK13393        275 FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDK----AGIPHL-PNPSHIVPVMVGDPV-------LCKQ  342 (406)
T ss_pred             ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCeEEEEeCCHH-------HHHH
Confidence            7878899999999999998876544567788999999999988    466554 456788887665432       4567


Q ss_pred             HHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        396 ICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       396 ~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+.|++ +||++++..+|..  +.+.+++||+++..+|++|+++++++|+++++.+
T Consensus       343 l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        343 ISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             HHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            8999988 5999998777643  3445789999999999999999999999988765

>KOG1360|consensus

Probab=100.00  E-value=8.5e-51  Score=371.35  Aligned_cols=353  Identities=26%  Similarity=0.438  Sum_probs=327.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      +++--||||+|||++.||+|.+|+.+.++++|.+.+|.|+..|++..+.+||++||++.+.+.+++|+|.+-||++.+..
T Consensus       171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLft  250 (570)
T KOG1360|consen  171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFT  250 (570)
T ss_pred             CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHH
Confidence            66777999999999999999999999999999999999999999999999999999999999999999999999998877


Q ss_pred             hcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        160 YVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       160 ~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      +.+  ||-+|+.|...|.++..|++-++++-+.|+|||+++|+++|++..       +...++|..|++++++|.++||+
T Consensus       251 Lak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~~hL~~lL~~~~-------~svPKivAFEtVhSM~Gavcple  323 (570)
T KOG1360|consen  251 LAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDLDHLEQLLQSSP-------KSVPKIVAFETVHSMDGAVCPLE  323 (570)
T ss_pred             HHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccCCHHHHHHHHHhCC-------CCCCceEEEeeeeccCCCcCCHH
Confidence            654  788899999999999999999999999999999999999998754       35678999999999999999999


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceec
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFS  317 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~  317 (457)
                      +|.+++++||++-.+||+|..|.+|+.|.|..+..|+- ..+||+.||++|+||..|||++++..+++.+|..+.+|.|+
T Consensus       324 elcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFT  402 (570)
T KOG1360|consen  324 ELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFT  402 (570)
T ss_pred             HHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEe
Confidence            99999999999999999999999999999999999985 68999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447        318 ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       318 ~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      +++||+..+.+++++++++..  ..++..-+++.+++++.|.+    .|+++. +..++++++.+++..       .+..
T Consensus       403 TSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~----~GiPVi-~~pSHIiPv~vgda~-------l~~~  470 (570)
T KOG1360|consen  403 TSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME----LGIPVI-PNPSHIIPVRVGDAA-------LAKQ  470 (570)
T ss_pred             cCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH----cCCccc-CCCcceeeeeccCHH-------HHHH
Confidence            999999999999999999765  56778888999999999999    888886 556899999999876       7788


Q ss_pred             HHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        396 ICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       396 ~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      +++.|+.+ |||+....||.+  +.+...+||.|+..||++-++.+++++..+..++.=+
T Consensus       471 ~sd~Li~~h~iYvQaINyPTV--~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l~  528 (570)
T KOG1360|consen  471 ASDILISKHNIYVQAINYPTV--ARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGLP  528 (570)
T ss_pred             HHHHHHHhcCeEEEeccCCcc--cccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence            99998865 999999999988  7778899999999999999999999999998877543

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=100.00  E-value=1.2e-49  Score=392.43  Aligned_cols=369  Identities=37%  Similarity=0.675  Sum_probs=307.9

Q ss_pred             EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447         83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK  162 (457)
Q Consensus        83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~  162 (457)
                      |||+||+|||+..||++++++.+++++||.++|++|.+||+...+.+||+++|+++|.+.++++++|+.|+..++.++++
T Consensus         1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~   80 (392)
T PLN03227          1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAK   80 (392)
T ss_pred             CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcc---cCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        163 RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDT---LNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       163 ~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~---~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      +||.|++++..|++++.++.+.+.++.+++++|++++++.++.......   ..+.+++++|++|++++++|.+.|+++|
T Consensus        81 ~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i  160 (392)
T PLN03227         81 RGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKEL  160 (392)
T ss_pred             CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHH
Confidence            9999999999999999999999999999999999999887765532110   0012357899999999999999999999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecC
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSA  318 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~  318 (457)
                      +++|++||+++|+||+|++|.+|++|++..+++|+.| .++||++.|++|++|..||++++++++++.++...++++|++
T Consensus       161 ~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~~  240 (392)
T PLN03227        161 VALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFSA  240 (392)
T ss_pred             HHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCccccC
Confidence            9999999999999999999999999999999999976 678999999999999999999999999988877677788988


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccC-------CeEEeccCCCCeEEEEecCCcchH--HH
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ-------RFLVQGHRDTPLKYLYLQKSDDEV--AS  389 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~--~~  389 (457)
                      +.+|+.+++++++++.+.+.+++++++++++++|++.|++.. .+       ++.+.....++++++.+.+.....  ..
T Consensus       241 ~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~  319 (392)
T PLN03227        241 SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDE  319 (392)
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhh
Confidence            888988888888876655566789999999999999998611 11       111122346889999886532110  00


Q ss_pred             HHHHHHHHHHHHHcCeeEecccc-Ccc-ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSH-LDQ-EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~-~~~-~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .....++++.|+++|+++.+... +.. ....++..+|++++..||+||||+++++|+++++.+.
T Consensus       320 ~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~  384 (392)
T PLN03227        320 TLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAIL  384 (392)
T ss_pred             hhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence            11235899999999999865321 100 0022357899999999999999999999999998775

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-50  Score=377.50  Aligned_cols=348  Identities=19%  Similarity=0.204  Sum_probs=290.0

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++|+|.|||+ +||+||||.++   +.+|+. ||.+.+|+.+|+++..+.+..+     .++...+|+++|++..
T Consensus        24 ~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~-hP~iv~al~~Q~~kl~h~sn~~-----~~~~~~~la~~L~~~s   97 (404)
T COG4992          24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHC-HPALVEALKEQAEKLWHVSNLF-----YNEPQAELAEKLVELS   97 (404)
T ss_pred             CceeEEeccccEEECCCCCEeeeeccceeeeccCCC-CHHHHHHHHHHHHHhhhccccc-----CChHHHHHHHHHHhhC
Confidence            467899999999995 99999999875   455664 9999999999999987654433     6789999999999999


Q ss_pred             C-CCcEEEecccHHHHHHHHHhhc---C---CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHH
Q psy15447        139 G-LEETALYSFGFSTSASAIAAYV---K---RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHL  199 (457)
Q Consensus       139 g-~~~~i~~~sG~~a~~~ai~a~~---~---~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~l  199 (457)
                      + .+.++|+|||+|||++||+...   .   +.++|.....+|+.+..++++++-            .+..+|+||++++
T Consensus        98 ~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al  177 (404)
T COG4992          98 PFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEAL  177 (404)
T ss_pred             ccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHH
Confidence            7 9999999999999999998643   3   447888899999999888777652            3457889999999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGV  274 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~  274 (457)
                      ++++.+           .+++|++||+++.+|.++|    |+++++||++||++||+||+|..  +|++|..+ .+++|+
T Consensus       178 ~~ai~~-----------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG--~GRTGk~fA~e~~gV  244 (404)
T COG4992         178 EAAIDE-----------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTG--LGRTGKLFAYEHYGV  244 (404)
T ss_pred             HHHhcc-----------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccC--CCccchHHHHHHhCC
Confidence            999964           5789999999999999877    89999999999999999999964  56777754 599999


Q ss_pred             CCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        275 STEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       275 ~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      .|   ||+  +++|++|+  +-|+++.++.+.+.+....|+.+|++  ||++||++.++++.+.++ ++.++.++++++|
T Consensus       245 ~P---DI~--tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGG--NpLacAv~~a~l~~l~~e-~ll~~v~~~g~~~  316 (404)
T COG4992         245 EP---DIL--TLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGG--NPLACAVALAVLEVLLEE-GLLENVREKGEYL  316 (404)
T ss_pred             CC---CEE--EeeccccCCccceeeEEchhhhhcCCCCcccCCCCc--CHHHHHHHHHHHHHHcch-hHHHHHHHHHHHH
Confidence            98   787  89999963  34667777777777777778877776  999999999999999754 5899999999999


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      ++.|+++...-++--..+..+.++.+.+..+.       .+..+++.|.++|+++.+..         ++++||.||+.+
T Consensus       317 ~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-------~a~~~~~~~~~~gvL~~~a~---------~~ViR~~PpL~i  380 (404)
T COG4992         317 LQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-------RARDIVRALREEGVLVLPAG---------PNVIRFLPPLVI  380 (404)
T ss_pred             HHHHHHHhhcCCceeeeecceeEEEEEecCcc-------cHHHHHHHHHHCCeEEecCC---------CCeEEecCCccC
Confidence            99999854222211122467899999998764       46789999999999987654         579999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhcC
Q psy15447        433 TEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~~~~  453 (457)
                      |++|+++++++++++++....
T Consensus       381 ~~eei~~~~~~l~~~l~~~~~  401 (404)
T COG4992         381 TEEEIDEALDALERALAAASA  401 (404)
T ss_pred             CHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999986643

>PRK09064 5-aminolevulinate synthase; Validated

Probab=100.00  E-value=5.7e-49  Score=392.32  Aligned_cols=352  Identities=27%  Similarity=0.480  Sum_probs=305.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      |++++||+||+|+|++.||++.+++.++++++++++++++..+|+.+.+.+|+++||+++|.+.++++++|++|+..+++
T Consensus        45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~  124 (407)
T PRK09064         45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLS  124 (407)
T ss_pred             CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence            59999999999999999999999999999999998888888888999999999999999999899999999999999999


Q ss_pred             hhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        159 AYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       159 a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      .+.+  +++.|+.+...|.+...+++..+.++..++++|++++++.++...       ++++++|+++++++++|.+.|+
T Consensus       125 ~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~~~~~~v~~~~v~s~~G~~~~l  197 (407)
T PRK09064        125 TLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAAD-------PDRPKLIAFESVYSMDGDIAPI  197 (407)
T ss_pred             HHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhcc-------CCCCeEEEEeCCCCCCccccCH
Confidence            8765  788888898899999999999999988999999999999987532       1356899999999999999999


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCccee
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF  316 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~  316 (457)
                      ++|+++|++||++||+||+|++|.+|++|.++.++.++. +++||+++||||++|+.|||+++++++++.++....++.|
T Consensus       198 ~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~~~~  276 (407)
T PRK09064        198 AEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPGFIF  276 (407)
T ss_pred             HHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCccccc
Confidence            999999999999999999999888898888876666764 4568999999999999999999999999988776666777


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTI  396 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  396 (457)
                      +++.+|..+++++++++.+++.+..+++++++++++.+.|++    .|+++. .+.++++++.+++..       .+.++
T Consensus       277 t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~iv~i~~~~~~-------~~~~l  344 (407)
T PRK09064        277 TTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDA----AGIPVM-PNESHIVPVMVGDPE-------KCKKA  344 (407)
T ss_pred             cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEeCCHH-------HHHHH
Confidence            777899999999999999887666678899999999999998    566654 345778877775432       56688


Q ss_pred             HHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        397 CDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       397 ~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++|++ +||++++..+|..  +.+.+++||+++..+|++|+++++++|+++++.+.
T Consensus       345 ~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~  399 (407)
T PRK09064        345 SDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPFHTDEMIDHLVEALVEVWARLG  399 (407)
T ss_pred             HHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            898875 5999988776543  33447899999999999999999999999987654

>PLN02483 serine palmitoyltransferase

Probab=100.00  E-value=8.5e-49  Score=395.43  Aligned_cols=362  Identities=26%  Similarity=0.474  Sum_probs=312.7

Q ss_pred             CCeeeEEeecCCccCCCC-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVE-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA  156 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a  156 (457)
                      +++++|||+|+||||+++ ++...+++.+++++||.++|+++..+|+.+.+.+||+++|+++|.+.++++++|+.++..+
T Consensus        98 ~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~  177 (489)
T PLN02483         98 KTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYATNSTI  177 (489)
T ss_pred             CCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence            478999999999999995 6788999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhc-cc-CCCCccEEEEEecCCCCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERD-TL-NSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~-~~-~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      +.+++++||.|++++++|.++..+++..|.++..++++|++++++.+++..... .+ ..+.++.+|++|++++++|.+.
T Consensus       178 i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~  257 (489)
T PLN02483        178 IPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC  257 (489)
T ss_pred             HHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc
Confidence            999999999999999999999999999999999999999999998887532110 00 0012345888999999999999


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcc
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGY  314 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~  314 (457)
                      ++++|+++|++||++||+||+|++|.+|++|++..+++++.+.++||+++||||++|+.|||+++++++++.++....++
T Consensus       258 ~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i~~~~~li~~l~~~~~~~  337 (489)
T PLN02483        258 KLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKRTCPAH  337 (489)
T ss_pred             CHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEEEcCHHHHHHHHHhCccc
Confidence            99999999999999999999999998999999988888988888999999999999999999999999999998766666


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKAN------PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~------~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .++.+++|..++++.++++.+...      .+++++++++.+++++.|++    .|+.+.++..++++++.+....    
T Consensus       338 ~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~----~G~~v~~~~~sp~~~l~l~~~~----  409 (489)
T PLN02483        338 LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQK----MGFEVLGDNDSPVMPIMLYNPA----  409 (489)
T ss_pred             cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHH----CCCcccCCCCCCEEEEEECCHH----
Confidence            677777888888888888876532      24678899999999999998    5777665566788888776543    


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                         ...+++++|+++||.+.+..+|..  +...+.+||+++..+|++||++++++|+++.+.+.
T Consensus       410 ---~~~~~~~~Ll~~GI~v~~~~fp~~--p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~  468 (489)
T PLN02483        410 ---KIPAFSRECLKQNVAVVVVGFPAT--PLLLARARICISASHSREDLIKALEVISEVGDLVG  468 (489)
T ss_pred             ---HHHHHHHHHHHCCcEEeeeCCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence               556799999999999998776543  33457899999999999999999999999987653

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=2.8e-47  Score=380.12  Aligned_cols=353  Identities=26%  Similarity=0.441  Sum_probs=303.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      +|+++++|+||+|+++++||++++++.+++++++.++++++.++|..+.+.+|+++|++++|.+.+++++||++|+..++
T Consensus        44 ~~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i  123 (410)
T PRK13392         44 GPRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL  123 (410)
T ss_pred             CCceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence            47899999999999999999999999999999998888888888888889999999999999999999999999999999


Q ss_pred             HhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        158 AAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       158 ~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      ..+..  +|+.|+.+..+|.++..+++..|.++..++++|++++++.+++..       ++++++|++++++||+|.+.|
T Consensus       124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~t~~v~i~~~~n~tG~~~~  196 (410)
T PRK13392        124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVD-------PDRPKLIAFESVYSMDGDIAP  196 (410)
T ss_pred             HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcc-------CCCCEEEEEeCCCCCCccccc
Confidence            87754  789999999999999999999999988889999999988887543       146789999999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      +++|+++|++||+++|+||+|+.|.+|+.|.++.++.++. +++|++++|+||++|+.|||+++++++++.++....++.
T Consensus       197 l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~~~  275 (410)
T PRK13392        197 IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPGFI  275 (410)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcchh
Confidence            9999999999999999999999888888877766555653 456899999999999999999999999998887666677


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      ++++.+|+.++++.++|+.++...+.+++++++.+++++.|++    .|+++. ++.++++.+.++.+.       ...+
T Consensus       276 ~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~i~~~~~~-------~~~~  343 (410)
T PRK13392        276 FTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA----NGIPVM-PSPSHIVPVMVGDPT-------LCKA  343 (410)
T ss_pred             ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEeCCHH-------HHHH
Confidence            7777888889999999998876666678899999999999988    576654 456777777665432       4567


Q ss_pred             HHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        396 ICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       396 ~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++++|+ ++||++.+..+|..  +.+..++|++++..+|++|+++++++|+++.+++.
T Consensus       344 ~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~  399 (410)
T PRK13392        344 ISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLHDDEDIDALVAALVAIWDRLE  399 (410)
T ss_pred             HHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence            999987 57999998776543  33457899999999999999999999999987653

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=100.00  E-value=4.4e-46  Score=370.32  Aligned_cols=381  Identities=28%  Similarity=0.448  Sum_probs=318.5

Q ss_pred             HcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc
Q psy15447         43 INNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY  121 (457)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~  121 (457)
                      ++++..+++++         .+..+.++.|.++++ +|+++|||++++|+|++.+|++++++.+++++++.++++++...
T Consensus         9 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~   79 (393)
T TIGR01822         9 LESIREAGLFK---------SERIITSPQGADIRVADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFIC   79 (393)
T ss_pred             HHHHHHcCCCC---------cccccccCCCceEEecCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCccc
Confidence            34555556655         467788899999997 99999999999999999999999999999999888888888888


Q ss_pred             cChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHH
Q psy15447        122 GTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEE  201 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~  201 (457)
                      |+.+.+.+|++.+|+++|.+.+++++||++|+..++.+++++||.|+++.++|.++..++++.+.+...++++|++++++
T Consensus        80 G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~  159 (393)
T TIGR01822        80 GTQDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEA  159 (393)
T ss_pred             CChHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999888888888999999999


Q ss_pred             HHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447        202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM  281 (457)
Q Consensus       202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di  281 (457)
                      .+++...     ++.++++|++++++|++|.+.|+++|+++|++||++||+||+|++|.+|..|.+..+..++. +++|+
T Consensus       160 ~i~~~~~-----~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di  233 (393)
T TIGR01822       160 QLKEARA-----AGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDI  233 (393)
T ss_pred             HHHhhhh-----cCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeE
Confidence            9976421     11367899999999999999999999999999999999999999888887777665556664 35799


Q ss_pred             EEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447        282 IIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       282 ~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      +++|+||+++ ..+||+++++++++.++.....+.++++.++..++++.++++.++..++.+++++++.+++.+.|++  
T Consensus       234 ~~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~--  311 (393)
T TIGR01822       234 ITGTLGKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEA--  311 (393)
T ss_pred             EEEEChHHhhCCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH--
Confidence            9999999996 5689999999999988765556677777777777788888887765566889999999999999988  


Q ss_pred             ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        361 VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       361 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                        .|+.+. .+.++++.+.+.+..       ...++++.|.++||++....+|..  +.+..++|++++..+|++||+++
T Consensus       312 --~g~~~~-~~~~~~~~i~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~t~edi~~~  379 (393)
T TIGR01822       312 --AGFDIK-PADHPIIPVMLYDAV-------LAQRFARRLLEEGIYVTGFFYPVV--PKGQARIRVQISAAHTEEQLDRA  379 (393)
T ss_pred             --cCCCCC-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEECCCCCHHHHHHH
Confidence              466654 334667766655422       456899999999999875544322  22345799999999999999999


Q ss_pred             HHHHHHHHHHhc
Q psy15447        441 IETLCKSHDIAV  452 (457)
Q Consensus       441 ~~~l~~~~~~~~  452 (457)
                      +++|+++.+++.
T Consensus       380 ~~~l~~~~~~~~  391 (393)
T TIGR01822       380 VEAFTRIGRELG  391 (393)
T ss_pred             HHHHHHHHHHhC
Confidence            999999877553

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=100.00  E-value=3e-46  Score=360.96  Aligned_cols=360  Identities=19%  Similarity=0.225  Sum_probs=284.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .|.++++++|+||| +|||+||||.++ +.++++ +||.|.+|+.+|+.++.+...  +.  ...+...+++++|.+.++
T Consensus        38 ~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~--~~--~~~e~~v~~ae~L~~~~p  113 (447)
T COG0160          38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT--RD--LYYEPYVELAEKLTALAP  113 (447)
T ss_pred             CcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccC--Cc--ccchhHHHHHHHHHHhCC
Confidence            68999999999999 599999999874 434444 499999999999999764332  22  234889999999999876


Q ss_pred             C---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC-----
Q psy15447        140 L---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN-----  195 (457)
Q Consensus       140 ~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d-----  195 (457)
                      .   +.++|.+||++||+.||+.   .+++..+|.....+|+.+..++.+++..             ++.+|+.+     
T Consensus       114 ~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p  193 (447)
T COG0160         114 GSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCP  193 (447)
T ss_pred             cccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCc
Confidence            4   5788999999999999975   5788899999999999999999888632             33333321     


Q ss_pred             ------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447        196 ------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFG  259 (457)
Q Consensus       196 ------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g  259 (457)
                                  .+.+++.+....     .++..++++|+||+++.+|.+.|    +++++++|++||++||+||+|+. 
T Consensus       194 ~~~~~~~~~~~~~~~~e~~i~~~~-----~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG-  267 (447)
T COG0160         194 FGIGGEECGDDALEYIERALFDLE-----VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG-  267 (447)
T ss_pred             ccCchhhhhHHHHHHHHHHHHhhc-----CCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC-
Confidence                        223444443322     23477899999999999998876    89999999999999999999953 


Q ss_pred             cccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447        260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK  336 (457)
Q Consensus       260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~  336 (457)
                       +|++|.. ..+++|+.|   ||+  |++|++|.  +.|.+++++++++ .....+.++|++  ||++||+++++|+.++
T Consensus       268 -~GRTG~~fa~E~~gv~P---Div--t~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~G--Npva~Aaa~AvL~vie  338 (447)
T COG0160         268 -FGRTGKMFAFEHFGVEP---DIV--TLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFGG--NPVACAAALAVLDVIE  338 (447)
T ss_pred             -CCccccchhhhhcCCCC---CEE--EecccccCCCceeEEeccHHhcc-cCCcccCCCCCc--CHHHHHHHHHHHHHHH
Confidence             4555654 569999988   787  89999964  4588999999998 555565666554  9999999999999988


Q ss_pred             hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447        337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHL  413 (457)
Q Consensus       337 ~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~  413 (457)
                      ++ .+.++..+.++++++.|.+++.  ..++.++  ..+.++.+.+..+..+ +++...+.+++++|+++|+++...+  
T Consensus       339 ~e-~L~~~a~~~G~~l~~~L~~l~~--~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G--  413 (447)
T COG0160         339 EE-NLLERAAELGEYLRDRLEELQE--KHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG--  413 (447)
T ss_pred             Hc-cHHHHHHHHHHHHHHHHHHHHh--hcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC--
Confidence            76 5999999999999999987542  2333333  4578999988765433 3444578899999999998876543  


Q ss_pred             ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                           ...|.+||.||+++|++++|+++++|+++++++
T Consensus       414 -----~~~nviRi~PPL~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         414 -----PHGNVLRILPPLTISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             -----CCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence                 236899999999999999999999999998865

>PRK07179 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-45  Score=367.47  Aligned_cols=348  Identities=21%  Similarity=0.344  Sum_probs=295.6

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      +|+.++||+|++||++.+||++++++.+++++++.+++.++.+.+..+.+.+|+++||+++|.+.+++++||++|+..++
T Consensus        52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l  131 (407)
T PRK07179         52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLL  131 (407)
T ss_pred             CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHH
Confidence            46778899999999999999999999999999876655555555556789999999999999999999999999999999


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      +++..+||.|+++...|.+.+.+++..|.++..++++|++++++.+++          .++++|++++++|++|.+.|++
T Consensus       132 ~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~----------~~~~lV~v~~v~n~tG~i~pl~  201 (407)
T PRK07179        132 QTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIER----------HGPGIIVVDSVYSTTGTIAPLA  201 (407)
T ss_pred             HHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHh----------cCCeEEEECCCCCCCCccccHH
Confidence            999999999999999999999999999999999999999999998864          2357899999999999999999


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceec
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFS  317 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~  317 (457)
                      +|+++|++||++||+||+|++|.+|++|.++...+++. .++|+++.|++|++|+.+|++++++++++.+.....+..++
T Consensus       202 ~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~~~~  280 (407)
T PRK07179        202 DIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPAIFS  280 (407)
T ss_pred             HHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCeeeC
Confidence            99999999999999999999998898888777677775 46799999999999988999999999888886555455677


Q ss_pred             CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHH
Q psy15447        318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTIC  397 (457)
Q Consensus       318 ~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  397 (457)
                      ++.++..++++.++++.++..++++++++++.+++++.|++    .|+++.  +.++++++.++...       ....+.
T Consensus       281 ~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~----~g~~v~--~~~~i~~l~~~~~~-------~~~~~~  347 (407)
T PRK07179        281 STLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSE----LGYNIR--SESQIIALETGSER-------NTEVLR  347 (407)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC--CCCCEEEEEeCCHH-------HHHHHH
Confidence            77777777777788888876666889999999999999988    466554  45688888765432       455788


Q ss_pred             HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.|.++||++....+|..  +...+.+||+++..+|++|+++++++|++++++.
T Consensus       348 ~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        348 DALEERNVFGAVFCAPAT--PKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             HHHHHCCceEeeecCCCC--CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            899999998654443322  2335799999999999999999999999988764

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=4.2e-46  Score=357.38  Aligned_cols=374  Identities=16%  Similarity=0.138  Sum_probs=283.2

Q ss_pred             CCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCC--CChhhHHHHHHHHHhcCCCCCCCCCcccC
Q psy15447         48 PEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFV--ENPDIEKCAIDCIDKNGVGSCGPRGFYGT  123 (457)
Q Consensus        48 ~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~--~~p~i~~a~~~~l~~~~~~~~~~~~~~g~  123 (457)
                      ...+|+|.+... +...|.+|++++|.|+++ |||+|||..|+.|+...  +||+|.+|+.+|+++..+..    .+..+
T Consensus        10 ~~~~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~----~~~~t   85 (449)
T COG0161          10 LSHLWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVM----FGGFT   85 (449)
T ss_pred             hhheeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchh----hcccC
Confidence            345556555543 322389999999999995 99999998886554333  47999999999999976532    12235


Q ss_pred             hHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-E--
Q psy15447        124 NVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-V--  188 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-~--  188 (457)
                      +++..+|+++|+++.+   .++++|.+|||+|++.|++...         ++..+|.....||+.++.+++++|.. .  
T Consensus        86 ~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~  165 (449)
T COG0161          86 HEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRH  165 (449)
T ss_pred             CchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhh
Confidence            6679999999999988   6788999999999999998642         23347888999999999999888721 1  


Q ss_pred             ----------EEe--cC---------CC------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----h
Q psy15447        189 ----------QYF--KH---------NN------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----L  236 (457)
Q Consensus       189 ----------~~~--~~---------~d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l  236 (457)
                                ...  |+         .+      .++||+.+.++.       +++++++|+||+.+. +|.+.|    +
T Consensus       166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g-------~~~IAAfI~EPv~g~agG~~~pp~~Yl  238 (449)
T COG0161         166 AFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHG-------PETIAAFIVEPVVGGAGGMLVPPPGYL  238 (449)
T ss_pred             hhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcC-------cccEEEEEecccccccCCcccCChHHH
Confidence                      111  11         01      345666666654       478999999999988 777766    8


Q ss_pred             HHHHHHHHHcCcEEEEEcC-cccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh--
Q psy15447        237 KDILSLRSKYQARIFVDES-VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS--  310 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa-~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~--  310 (457)
                      +++++||++||++||+||+ .+||++|.  ...++++|+.|   ||+  +++|++++   +-|+++.++++.+.+...  
T Consensus       239 ~~vr~iC~ky~ILlI~DEV~tGFGRTG~--~FA~e~~gi~P---Di~--~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~  311 (449)
T COG0161         239 KRVREICDKYGILLIADEVATGFGRTGK--MFACEHAGIVP---DIL--CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA  311 (449)
T ss_pred             HHHHHHHHHcCcEEEeecceeCCCcCch--hhhhhhcCCCC---Cee--eecccccccchhhHhHhhhHHHHHHHhcccC
Confidence            9999999999999999996 56665553  34569999998   787  89999952   235567788888887654  


Q ss_pred             ---CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc-ccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        311 ---GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ-HKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       311 ---~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                         .|+++|+  .||++||+++++|+++++++ +.++.++...+|.+.|++ +...+.+-- .+..+.+..+++..+.++
T Consensus       312 ~~f~HG~TYs--ghPlacAaAla~L~i~e~e~-l~~~~~~~~~~l~~~L~~~l~~~p~Vgd-VR~~Gli~~iElv~d~~t  387 (449)
T COG0161         312 GAFMHGHTYS--GNPLACAAALANLDILEEED-LLERVAEIGAYLQAGLQAALADHPLVGD-VRGLGLIGAIELVADKAT  387 (449)
T ss_pred             CeeccCCccc--cCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhcccCCcEEE-eeccceEEEEEEeccccc
Confidence               2444454  59999999999999998764 889999999999999987 322222211 135577888887766532


Q ss_pred             --HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        387 --VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       387 --~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                        ..+.....++.+.++++|+++++.+          +.+-++||+.+|++||+++++++.+++++...
T Consensus       388 ~~~f~~~~~~~~~~~~~e~Gl~iRp~g----------~~i~~~PPliit~~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         388 KTPFEARVGARVRAAALERGLLIRPLG----------DVIYLMPPLIITREEIDELVDALREALDETLA  446 (449)
T ss_pred             ccchhhhHHHHHHHHHHHCCeEEeecC----------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence              2222346688999999999999864          68999999999999999999999999987654

>KOG1357|consensus

Probab=100.00  E-value=3.5e-47  Score=353.62  Aligned_cols=358  Identities=27%  Similarity=0.488  Sum_probs=322.8

Q ss_pred             eeeEEeecCCccCCCC-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVE-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      .++||++|.||+||++ +-...+++.+.+++|+...|+++.--|+.+.|.++|+..|+++|.+++++|+.|+.+|.+.++
T Consensus       136 ~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p  215 (519)
T KOG1357|consen  136 SRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIP  215 (519)
T ss_pred             eeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcc
Confidence            3689999999999994 456788889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhc--ccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERD--TLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~--~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      +++.++..|+.|+..|.++..+++++|+.++.+.|||+++||++|++.....  +.+++-++.+|+.|.++++.|.++.|
T Consensus       216 ~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~L  295 (519)
T KOG1357|consen  216 SLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDL  295 (519)
T ss_pred             eeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeeccc
Confidence            9999999999999999999999999999999999999999999998865332  22334566789999999999999999


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCccee
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF  316 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~  316 (457)
                      +++.+++++|.++|++||+|+.|+.|++|+|.+++++++|.++||++++|.|++|..||+++++++++++++.......+
T Consensus       296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GGyiagsk~lid~lrt~s~~~~y  375 (519)
T KOG1357|consen  296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELIDYLRTPSPSALY  375 (519)
T ss_pred             HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccceecCcHHHHhhhccCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888888


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKAN------PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK  390 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~------~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  390 (457)
                      .++++|+.+.-.+.+++.+...      .+..+++.+|..+|+..|+.    .|+-+.++..+|++++.+-.+.      
T Consensus       376 at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~----~gfivyG~~dSpVvplll~~~~------  445 (519)
T KOG1357|consen  376 ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQK----MGFIVYGNNDSPVVPLLLYGPA------  445 (519)
T ss_pred             cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhc----CcEEEecCCCCCcceeeecCcc------
Confidence            8889999999999999888643      35678899999999999998    8898888888999998877765      


Q ss_pred             HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                       +...+.+.|+++++-+...++|..  +....+.|++.+..||.|+++++++.++++-++
T Consensus       446 -k~~~f~r~~l~~nigvVvvgfPat--pl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~  502 (519)
T KOG1357|consen  446 -KIVAFSREMLERNIGVVVVGFPAT--PLLESRARFCLSASHTKEDLDRALEVIDRVGDE  502 (519)
T ss_pred             -cccHHHHHHHhcCceEEEEeCCCc--hHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence             566788899999888887777755  445678999999999999999999999887644

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=1.8e-44  Score=357.89  Aligned_cols=367  Identities=26%  Similarity=0.477  Sum_probs=307.1

Q ss_pred             CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447         63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE  142 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  142 (457)
                      +|..+.+++|++|+.+|++++||++++++++..+|++.+++.+++++++...+.++.+.|..+...++++++++++|.+.
T Consensus        16 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~   95 (385)
T TIGR01825        16 SIRVLESAQGPRVRVNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA   95 (385)
T ss_pred             cccccccCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc
Confidence            47889999999999999999999998889998899999999999998876555566677889999999999999999888


Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      .+++++|++++..++.+++++||.|+++.++|.+...++...+.++..+++.|++++++.+++..       .+++++|+
T Consensus        96 ~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~-------~~~~~~v~  168 (385)
T TIGR01825        96 ALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLRENP-------SYGKKLIV  168 (385)
T ss_pred             EEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhc-------cCCCeEEE
Confidence            89999999999999999999999999999999999999899999888888899999998887532       13578899


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY  302 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~  302 (457)
                      ++++++++|.+.|+++|.++|++||+++|+||+|+.|.++..+.+...++++. .+.|++++|+||++|+.|||++++++
T Consensus       169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~gG~~~~~~~  247 (385)
T TIGR01825       169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVGGYAAGHKE  247 (385)
T ss_pred             EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCCCEEecCHH
Confidence            99999999999999999999999999999999998887776665555556665 35789999999999988999999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +++.+......+.+++..+|..++++.++++.+.+..+..++++++++++.+.|++    .|+++. .+.++++++.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~  322 (385)
T TIGR01825       248 LIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGK----LGYDTG-GSETPITPVVIGD  322 (385)
T ss_pred             HHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCCC-CCCCCEEEEEECC
Confidence            99988765444555555677888888888887765556788899999999999988    466654 3445676666543


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..       ...++++.|+++||+++...++..  +.+.+++|++++..+|++|+++++++|+++++.+
T Consensus       323 ~~-------~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~  382 (385)
T TIGR01825       323 EK-------AAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL  382 (385)
T ss_pred             HH-------HHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence            22       456799999999999876555422  2234789999999999999999999999988654

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=100.00  E-value=1.2e-43  Score=351.98  Aligned_cols=363  Identities=26%  Similarity=0.435  Sum_probs=302.6

Q ss_pred             CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447         63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE  142 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  142 (457)
                      +-+++++++|++++.+|++||||.+++++|+.++|++.+++.+++.+++.+.+.++..+|..+...++++.++++++.+.
T Consensus        22 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~  101 (385)
T PRK05958         22 SLRPREGGAGRWLVVDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER  101 (385)
T ss_pred             cccccccCCCceeEeCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc
Confidence            56789999999999999999999998888887789999999999999886666666677788899999999999999888


Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      .+++++|++++..++.+++++||.|++..++|+++..++.+.|.++..++.+|++++++.++...        +++++++
T Consensus       102 ~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~--------~~~~lvi  173 (385)
T PRK05958        102 ALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKWR--------AGRALIV  173 (385)
T ss_pred             EEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhcc--------CCCeEEE
Confidence            89999999999988889999999999999999999999999999999999999999999886521        2467889


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY  302 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~  302 (457)
                      ++++++++|.+.++++|+++|++||+++|+||+|+.|.++..|.+....+++.....+|+++|+||++|+.||+++++++
T Consensus       174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~Gg~~~~~~~  253 (385)
T PRK05958        174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGAAVLGSET  253 (385)
T ss_pred             EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCCcEEEcCHH
Confidence            99999999999999999999999999999999999887776565544434443233358899999999988999999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +++.+......+.++++.++..++++.++++.++..+++.+++.++.+++.+.|++    .++++. ++.+.++++.+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~  328 (385)
T PRK05958        254 LIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRA----LGFQLM-DSQSAIQPLIVGD  328 (385)
T ss_pred             HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCCcC-CCCCCEEEEEeCC
Confidence            88887655445566666788888888899988765556788999999999999988    456554 4567788887754


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ..       ...++++.|.++||.+.+...+..  +.+.+++|++++..+|++|+++++++|+++
T Consensus       329 ~~-------~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~lRis~~~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        329 NE-------RALALAAALQEQGFWVGAIRPPTV--PAGTSRLRITLTAAHTEADIDRLLEALAEA  384 (385)
T ss_pred             HH-------HHHHHHHHHHHCCceEecccCCCC--CCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence            32       556799999999999987543321  223478999999999999999999999875

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=4e-44  Score=339.31  Aligned_cols=387  Identities=16%  Similarity=0.195  Sum_probs=307.5

Q ss_pred             CChhhHHHHHcccCCCCCCCcccccccc-CCceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHh
Q psy15447         34 KHTINVDALINNWTPEPIVSKAEKFKDV-SSKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDK  109 (457)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~  109 (457)
                      .+++++.+...+..|.++.+|.+..... .+|+++++++|+|+| +|||+||||+.+ .++-++ .||.|.+|+++|+++
T Consensus         5 ~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~   84 (432)
T COG0001           5 PKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER   84 (432)
T ss_pred             cchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence            3467889999999999999988776543 489999999999999 599999999753 444444 489999999999998


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhcCC-CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                       |..++      .+++...++++.+.+.++. |.+.|++||++|+++||+   ++++|.++|..+..||++....+.-.|
T Consensus        85 -G~~fg------~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~ag  157 (432)
T COG0001          85 -GLSFG------APTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAG  157 (432)
T ss_pred             -cCCCC------CCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcC
Confidence             54433      2477888999999999886 999999999999999986   568899999999999988655443211


Q ss_pred             -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                         ..+..+++||++++++++++..        +.+++|++||+.++.|.+.|    +++|++|
T Consensus       158 sg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g--------~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~l  229 (432)
T COG0001         158 SGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYG--------DDIAAVIVEPVAGNMGVVPPEPGFLEGLREL  229 (432)
T ss_pred             cCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcC--------CcEEEEEeccccCCCCCCCCCHHHHHHHHHH
Confidence                               2456789999999999999864        67899999999999999988    8899999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSAS  319 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~  319 (457)
                      |++||++||+||+.+..+...  .|.+.++|+.|   |+.  |++|.+|+  +.|++.|++++++.+...+..|. -+.+
T Consensus       230 t~e~G~lLI~DEViTGFR~~~--gGaq~~~gi~P---Dlt--tlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~s  302 (432)
T COG0001         230 TEEHGALLIFDEVITGFRVAL--GGAQGYYGVEP---DLT--TLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLS  302 (432)
T ss_pred             HHHcCcEEEEecchhhcccCC--cccccccCcCc---chh--hhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCC
Confidence            999999999999987666543  46788999999   565  89999963  45889999999998866553332 1234


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL  393 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~  393 (457)
                      .||++++|+.++++.+.+.+...+++.+++++|++.|++.....+++......+.++.+.+......      ..+....
T Consensus       303 gnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~  382 (432)
T COG0001         303 GNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERF  382 (432)
T ss_pred             CcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHH
Confidence            6999999999999999876557899999999999999875444666665556677777777653211      2222345


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .++.+.|+++||++.|..+           =...++..||++|||+.+++++++++++..
T Consensus       383 ~~~~~~~l~~GV~l~ps~~-----------ea~flS~ahte~di~~~~~a~~~~~~~~~~  431 (432)
T COG0001         383 AKFFHHLLNRGVYLAPSQF-----------EAGFLSTAHTEEDIDRTLEAADEAFKELAG  431 (432)
T ss_pred             HHHHHHHHhCCcccCCccc-----------cceeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence            5677799999999987653           123456679999999999999999887653

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=100.00  E-value=3e-44  Score=361.53  Aligned_cols=378  Identities=16%  Similarity=0.165  Sum_probs=283.8

Q ss_pred             HcccCCCCCCCccccccc--cCCceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCC
Q psy15447         43 INNWTPEPIVSKAEKFKD--VSSKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCG  116 (457)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~  116 (457)
                      ....+.+.+|.|.+....  ...|+++++++|+|+| .|||+||||.+   +.++|+. ||+|.+|+.+|++++++.+  
T Consensus        49 ~~~~~~~~~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~-hp~v~~Av~~ql~~~~~~~--  125 (504)
T PLN02760         49 ENGFKGHDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGS-EPRLVAAATEQLNKLPFYH--  125 (504)
T ss_pred             hhhhccCCcccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCC-CHHHHHHHHHHHhhcccee--
Confidence            344556666666655432  2368899999999999 59999999987   4677864 9999999999999865432  


Q ss_pred             CCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhc
Q psy15447        117 PRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIAS  184 (457)
Q Consensus       117 ~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~  184 (457)
                       ....++++...+|+++|++.+.   .+.++|++||++|++.|++...         ++.++|..+..+|+.+..+++++
T Consensus       126 -~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~sls  204 (504)
T PLN02760        126 -SFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLS  204 (504)
T ss_pred             -cccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhcc
Confidence             1223468889999999999853   3468899999999999998763         34568888999999999888877


Q ss_pred             CCeE------------EEecCC----------C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        185 RCKV------------QYFKHN----------N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       185 g~~~------------~~~~~~----------d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      |...            ...+.+          +        .+++++.+.+..       ++++++|++||+++++|.+.
T Consensus       205 g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~iAAvI~EPv~g~gG~~~  277 (504)
T PLN02760        205 GLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEG-------PETIAAFIAEPVMGAGGVIP  277 (504)
T ss_pred             CChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcC-------CCceEEEEECCccCCCCCcC
Confidence            6421            111111          1        134666554321       25689999999999999998


Q ss_pred             C----hHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHH
Q psy15447        235 P----LKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEH  306 (457)
Q Consensus       235 ~----l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~  306 (457)
                      |    +++|+++|++||++||+||++ ++|++|.  .+..+++|+.|   ||+  +|+|++|+   +.|++++++++++.
T Consensus       278 p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~--~~a~e~~gv~P---Div--tlgK~lggG~~PigAv~~~~~i~d~  350 (504)
T PLN02760        278 PPATYFEKIQAVLKKYDILFIADEVICAFGRLGT--MFGCDKYNIKP---DLV--SLAKALSSAYMPIGAVLVSPEISDV  350 (504)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--hhHHHhcCCCC---cEE--EecccccCCccccceEeecHHHHhh
Confidence            8    999999999999999999998 6877775  33468899988   676  89999964   45778899999988


Q ss_pred             HHhh-------CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        307 HRLS-------GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       307 ~~~~-------~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +...       .++++|  +.+|++|++++++|++++++ ++.+++++++++|++.|+++... ++.......+.++.+.
T Consensus       351 ~~~~~~~~~~~~h~~T~--~gnPl~~Aaala~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~-~~v~~vrG~Gl~~gie  426 (504)
T PLN02760        351 IHSQSNKLGSFAHGFTY--SGHPVSCAVALEALKIYKER-NIPEHVNKIAPRFQDGIKAFSGS-PIIGEIRGTGLILGTE  426 (504)
T ss_pred             hhcccccccCcccCCCC--CCCHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhcC-CCeeeEEeCceEEEEE
Confidence            7532       233344  45999999999999999876 58999999999999999874222 2211123557788887


Q ss_pred             ecCCcch----HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        380 LQKSDDE----VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       380 ~~~~~~~----~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.++...    .........+.+.|+++||++.+.          .+.+|++|++.+|++|||+++++++++++.+.
T Consensus       427 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~  493 (504)
T PLN02760        427 FVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDNIMMSPPLIITPEEVDELISIYGKALKATE  493 (504)
T ss_pred             EecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            7543211    111223567889999999998653          25799999999999999999999999988764

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=100.00  E-value=8.5e-44  Score=352.57  Aligned_cols=348  Identities=17%  Similarity=0.211  Sum_probs=275.9

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|.|+|+ ||++||||.+   ++++|+. ||+|.+|+.+|+++......+     ..++.+.+|+++|+++.
T Consensus        17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~~~~~~~~~~~~-----~~~~~~~~la~~L~~~~   90 (397)
T TIGR03246        17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHA-HPELVKALIEQADKLWHIGNG-----YTNEPVLRLAKKLVDAT   90 (397)
T ss_pred             CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCC-CHHHHHHHHHHHHhcccccCc-----cCCHHHHHHHHHHHhhC
Confidence            478899999999995 9999999988   5789995 999999999999984322111     24778899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~  197 (457)
                      +.+++++++||++|++.|++..         .++.++|..+..+|+++..++.+++.            .+..+++||++
T Consensus        91 ~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  170 (397)
T TIGR03246        91 FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLA  170 (397)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHH
Confidence            8889999999999999999875         35667888999999998888777653            34578899999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      ++++.+.           +++++|++||+++++|.+.|    +++|+++|++||+++|+||+|. |. |++|.++ .+++
T Consensus       171 ~l~~~l~-----------~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~-Gr~G~~~a~~~~  237 (397)
T TIGR03246       171 AAKALIS-----------DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQT-GV-GRTGELYAYMHY  237 (397)
T ss_pred             HHHHHhc-----------cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-Cccccchhhhhc
Confidence            9998884           25789999999999897753    8999999999999999999983 32 6666654 4778


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.|   |++  |++|++|+  +.|++++++++++.+....+..+|+  .+|+.+++++++|+.+++ +++.++++++++
T Consensus       238 gv~p---Di~--t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~--~~p~~~aaa~a~l~~~~~-~~l~~~~~~~~~  309 (397)
T TIGR03246       238 GVTP---DIL--TSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYG--GNPLACAVAGKVLDLVNT-PELLAGVKQRHD  309 (397)
T ss_pred             CCCC---CEE--EeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCC--CCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence            8877   676  89999962  3477888999988886544444443  589999999999998865 458899999999


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      ++++.|+++....++....+..+.++.+.+.++.     ......+++.|+++|+++.+..         .+++|++|++
T Consensus       310 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-----~~~~~~~~~~l~~~Gv~~~~~g---------~~~lR~~p~~  375 (397)
T TIGR03246       310 LFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY-----QGKAKQFVNAAAEEGVIALIAG---------PNVVRFAPSL  375 (397)
T ss_pred             HHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch-----hhHHHHHHHHHHHCCeEEeecC---------CCEEEEeCCC
Confidence            9999998743111211112345677777765421     0145689999999999987532         3789999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHh
Q psy15447        431 SHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+|++||++++++|+++++.+
T Consensus       376 ~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       376 VISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999988764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=9e-43  Score=342.62  Aligned_cols=358  Identities=28%  Similarity=0.466  Sum_probs=299.5

Q ss_pred             eecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447         67 VDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY  146 (457)
Q Consensus        67 i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~  146 (457)
                      ..+++|.++..+|+++|||++++++|+..+|++.+++.+++++|+.+...++..+|..+...++++.++++++.+..+++
T Consensus         3 ~~~~~~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~   82 (360)
T TIGR00858         3 LDRGPGPEVVRDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLF   82 (360)
T ss_pred             cccCCCCeEEECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEE
Confidence            46889999999999999999998888878899999999999988876655666677788899999999999998889999


Q ss_pred             cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ++|++++..++.+++++||.|+++.++|.....+++..|.++..++..|++++++.+++..       ..++++|+++++
T Consensus        83 ~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~-------~~~~~~v~~~~~  155 (360)
T TIGR00858        83 SSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNR-------GERRKLIVTDGV  155 (360)
T ss_pred             CchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcc-------cCCCeEEEEeCC
Confidence            9999998888888899999999999999999999999999999898899999999887532       124688999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH  306 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~  306 (457)
                      ++++|.+.|+++|.++|++||+++|+||+|+.|.++..+.+....+++.+++.||+++|+||++|+.|||+++++++++.
T Consensus       156 ~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~gG~~~~~~~~~~~  235 (360)
T TIGR00858       156 FSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDY  235 (360)
T ss_pred             ccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccCcEEEcCHHHHHH
Confidence            99999999999999999999999999999998877665555556667766677899999999999889999999998888


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      +......+.++++.++..++++.++++.+...++++++++++.+++.+.|++    .++.+. ++.++++++.++...  
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~~~--  308 (360)
T TIGR00858       236 LINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEA----LGFTLM-PSCTPIVPVIIGDNA--  308 (360)
T ss_pred             HHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----cCCccC-CCCCCEEEEEeCCHH--
Confidence            7655444555555678877888888887765556789999999999999988    455554 456788888876432  


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                           ...+++++|.++||++.+..++..  +.+.+++|++++..+|++|+++++++|+
T Consensus       309 -----~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       309 -----SALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             -----HHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence                 456799999999999987544321  2234689999999999999999999874

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=100.00  E-value=4.7e-42  Score=342.02  Aligned_cols=385  Identities=28%  Similarity=0.468  Sum_probs=310.5

Q ss_pred             hHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC
Q psy15447         38 NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG  116 (457)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~  116 (457)
                      .+++.++.....+.+..         +..+++++|.++|+ +|++++||++++++++..+|++.+++.+++++++.+++.
T Consensus         8 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~   78 (397)
T PRK06939          8 QLREELEEIKAEGLYKE---------ERVITSPQGADITVADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMAS   78 (397)
T ss_pred             HHHHHHHHHHHcCCCcc---------cccccCCCCceEEecCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcc
Confidence            34555555555555542         34578899999996 999999999999899988999999999999987766666


Q ss_pred             CCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCH
Q psy15447        117 PRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM  196 (457)
Q Consensus       117 ~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~  196 (457)
                      ++...|..+.+.++++.+++++|.+..+++++|++++..++.+++++||.|+++.++|.+...++...+.++..++++|+
T Consensus        79 ~~~~~G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~  158 (397)
T PRK06939         79 VRFICGTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDM  158 (397)
T ss_pred             cccccCCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCH
Confidence            67777889999999999999999888899999999999999999999999999999999999999999999988988999


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++++.+++...     +..++++|+++++++++|.+.++++|+++|++||++||+||+|++|.++..+.+....+++. 
T Consensus       159 ~~l~~~i~~~~~-----~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-  232 (397)
T PRK06939        159 ADLEAQLKEAKE-----AGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-  232 (397)
T ss_pred             HHHHHHHHhhhc-----cCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-
Confidence            999998865321     01356788899999999999999999999999999999999998776665554444445554 


Q ss_pred             CCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       277 ~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      +++|++++|+||++ |..|||+++++++++.++.....+.++++.++..++++.++++.+.+.++++++++++.+++.+.
T Consensus       233 ~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~  312 (397)
T PRK06939        233 DRVDIITGTLGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREG  312 (397)
T ss_pred             CCCcEEEEECHHHhCccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence            35689999999999 66789999999999988765555556666677777888888887765556788999999999999


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      |++    .+++.. .+.+.++.+.+....       ...++++.|.++||.+.+..++..  +...+++|++++..++++
T Consensus       313 L~~----~~~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~L~~~gI~v~~~~~~~~--~~~~~~iRi~~~~~~~~~  378 (397)
T PRK06939        313 MTA----AGFTLG-PGEHPIIPVMLGDAK-------LAQEFADRLLEEGVYVIGFSFPVV--PKGQARIRTQMSAAHTKE  378 (397)
T ss_pred             HHH----cCCCcC-CCCCCEEEEEECCHH-------HHHHHHHHHHHCCceEeeeCCCCC--CCCCceEEEEECCCCCHH
Confidence            988    455543 344566655554322       456899999999999886554321  223468999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy15447        436 DMNSLIETLCKSHDIA  451 (457)
Q Consensus       436 di~~~~~~l~~~~~~~  451 (457)
                      |+++++++|+++++..
T Consensus       379 ~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        379 QLDRAIDAFEKVGKEL  394 (397)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988754

>PRK12403 putative aminotransferase; Provisional

Probab=100.00  E-value=1.8e-42  Score=346.93  Aligned_cols=361  Identities=15%  Similarity=0.130  Sum_probs=267.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+.+|+++++..+   ..+.++++.+.+|+++|++++
T Consensus        36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~  111 (460)
T PRK12403         36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYN---MFFHTTHPAVIELSELLFSLL  111 (460)
T ss_pred             CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCee---cccccCCHHHHHHHHHHHHhC
Confidence            47899999999999 599999999764   34677 58999999999999976432   233456889999999999998


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc------C-CCCE--EEEeCcccHHHHHHHHhcCCe-----------EEEecCC--
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV------K-RNDA--VFVDENINFAIQTGLIASRCK-----------VQYFKHN--  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~------~-~gd~--v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~--  194 (457)
                      +  .+++++++||++|++.|++...      + +++.  |.....+|+++..++++++..           +..++.+  
T Consensus       112 p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~  191 (460)
T PRK12403        112 PGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYW  191 (460)
T ss_pred             CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcc
Confidence            7  5789999999999999998764      2 2233  345677899999988877633           1222211  


Q ss_pred             -----C----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447        195 -----N----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       195 -----d----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa  255 (457)
                           +          .+++++.+.+..       ++.+++|++||+++.+|.+.|    +++|+++|++||++||+||+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~le~~~~~~~-------~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV  264 (460)
T PRK12403        192 YANGGELTPAEFGRRAALQLEEKILELG-------AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEV  264 (460)
T ss_pred             cccccCCChHHHHHHHHHHHHHHHHHhC-------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence                 1          244555554321       256889999999999999877    99999999999999999999


Q ss_pred             cccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcc--eecCCCcHHHHHHHH
Q psy15447        256 VSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGY--CFSASLPPFLAVAAN  329 (457)
Q Consensus       256 ~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~  329 (457)
                      ++.  +|++|.++ .+++|+.|   ||+  +++|++|+   +.|.+++++++++.+......+  ..+.+.+|++|++++
T Consensus       265 ~tG--fGRtG~~~a~e~~gv~P---Div--~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaal  337 (460)
T PRK12403        265 IGG--FGRTGEWFAHEHFGFEP---DTL--SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAI  337 (460)
T ss_pred             ccC--CCcCchhhhhhhcCCCC---CeE--EEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Confidence            842  45666664 48899988   787  69999962   3456678888888875432222  233346999999999


Q ss_pred             HHHHHHhhCcHHHHHHH-HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHHcC
Q psy15447        330 KALHLLKANPSLLTKLR-EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQAG  404 (457)
Q Consensus       330 a~l~~~~~~~~~~~~l~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~G  404 (457)
                      ++|+++++++ +.++++ ++.++|++.|+++....++....+..+.++.+.+..+...    .........+.+.++++|
T Consensus       338 a~L~~i~~~~-l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  416 (460)
T PRK12403        338 ANLKALRDEG-VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEG  416 (460)
T ss_pred             HHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCC
Confidence            9999998764 789996 8999999988764211222222245688888887543211    000112445777889999


Q ss_pred             eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++.+..          +.+|++|++++|++|+++++++++++++++.
T Consensus       417 ll~~~~~----------~~~~l~Ppl~it~~eid~~~~~l~~al~~~~  454 (460)
T PRK12403        417 VIIRSTL----------GRMIMAPALVAGRAEIDELVDKTRIAVDRTA  454 (460)
T ss_pred             EEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9986432          4699999999999999999999999998874

>PRK07505 hypothetical protein; Provisional

Probab=100.00  E-value=5.2e-42  Score=341.22  Aligned_cols=357  Identities=21%  Similarity=0.344  Sum_probs=274.5

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcCC
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMGL  140 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~  140 (457)
                      +++.+++++|+++| .||++||||++++++|+.+||+|.+|+.+++++++ .+++.++.. ...+.+.+++++|++++|.
T Consensus        28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~-~~~~~~~~l~~~la~~~~~  106 (402)
T PRK07505         28 NGLTVGEREGILITLADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTR-VRSQILKDLEEALSELFGA  106 (402)
T ss_pred             ccceeeccCCccEEecCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchh-hhhHHHHHHHHHHHHHhCC
Confidence            45789999999999 59999999999999997779999999999999987 344444332 2577899999999999998


Q ss_pred             CcEEEecccHHHHHHHHHhhc------CCCCEEEEeCcccHHHHH--HHHhcCCeEEEecCCCHHHHHHHHHhhchhccc
Q psy15447        141 EETALYSFGFSTSASAIAAYV------KRNDAVFVDENINFAIQT--GLIASRCKVQYFKHNNMQHLEELLRQQDERDTL  212 (457)
Q Consensus       141 ~~~i~~~sG~~a~~~ai~a~~------~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~  212 (457)
                       ++++++||++|++.+++...      +++++|+.+..+|+++..  +....+.++..++++|++++++.++.       
T Consensus       107 -~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~-------  178 (402)
T PRK07505        107 -SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDHNDLDALEDICKT-------  178 (402)
T ss_pred             -CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCCCCHHHHHHHHhc-------
Confidence             88999999999999987643      345678888899998642  33334578889999999999988753       


Q ss_pred             CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCC-CCCCccEEEecCcccc
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGV-STEEVDMIIGSLEHAL  290 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~-~~~~~Di~~~s~sK~l  290 (457)
                         .++.+++++|++ ++|.+.|+++|+++|++||++||+||+|+++.+|++|.+.. ++++. .+ +.+++++|++|++
T Consensus       179 ---~~~~~vl~~p~~-~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~-d~~i~~~s~sK~~  253 (402)
T PRK07505        179 ---NKTVAYVADGVY-SMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLN-ERTIIAASLGKAF  253 (402)
T ss_pred             ---CCCEEEEEeccc-ccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCC-CCeEEEEechhhh
Confidence               235677777655 88999999999999999999999999998877888777643 56775 44 3357889999999


Q ss_pred             cCcccEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        291 GSVGGFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       291 g~~gG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                      |+.||+++ +++++++.++....+++|+++.++.+++++.++++.+.++  .++.++++++.+.+...+..    .   .
T Consensus       254 ~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~---~  326 (402)
T PRK07505        254 GASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT----E---Q  326 (402)
T ss_pred             hccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh----c---C
Confidence            98889976 4788888888777888898888889999999999866543  34455565555554433222    1   1


Q ss_pred             eccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        368 QGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       368 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      . ....++.++.+++..       ...++.+.|+++||++++..+|..  +.+.+++||++++.+|++|+++++++|+++
T Consensus       327 ~-g~~~~i~~~~~~~~~-------~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~~t~eei~~~~~~l~~~  396 (402)
T PRK07505        327 S-GSFLPIRLIYIGDED-------TAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRASHTNDEIKRLCSLLKEI  396 (402)
T ss_pred             C-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCccCCHHHHHHHHHHHHHH
Confidence            1 122333344443322       456799999999999988765432  223478999999999999999999999998


Q ss_pred             HHH
Q psy15447        448 HDI  450 (457)
Q Consensus       448 ~~~  450 (457)
                      +++
T Consensus       397 l~~  399 (402)
T PRK07505        397 LDE  399 (402)
T ss_pred             HHh
Confidence            754

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=9.2e-43  Score=343.31  Aligned_cols=343  Identities=17%  Similarity=0.199  Sum_probs=269.0

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|+|+|+ |||+||||.+   ++++|++ ||+|.+|+.+|+.+....+.   .  ..+++..+|+++|++..
T Consensus        18 ~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~---~--~~~~~~~~la~~l~~~~   91 (395)
T PRK03715         18 PDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLINPSP---A--FYNEPMAKLAGLLTQHS   91 (395)
T ss_pred             CCceEEeeecCEEEECCCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhcccccc---c--ccCHHHHHHHHHHhhcc
Confidence            367889999999995 9999999986   5778887 89999999999988543321   1  24677888999998877


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQH  198 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~  198 (457)
                      +.+++++++||++|++.|++...        ++.++|..+..+|+++..++.+++..            +...+++|+++
T Consensus        92 ~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~  171 (395)
T PRK03715         92 CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIAS  171 (395)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHH
Confidence            77889999999999999998764        44568888999999999998887643            12234678899


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG  273 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~  273 (457)
                      +++.+.           +.+++|++||+++++|.+.|    +++|+++|++||+++|+||+|+ | +|++|.++ .++++
T Consensus       172 l~~~l~-----------~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~GRtG~~~a~~~~g  238 (395)
T PRK03715        172 VEKLIT-----------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-G-CGRTGTLFAYELSG  238 (395)
T ss_pred             HHHHcC-----------CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCCCcchhhHhhcC
Confidence            988774           24689999999999999887    9999999999999999999997 4 67888875 48899


Q ss_pred             CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      +.|   ||+  +++|++|+  +.|++++++++... ....+..+|  +.+|+.|++++++|+++++ ++++++++++.++
T Consensus       239 v~P---Di~--t~gK~lg~G~p~~av~~~~~i~~~-~~~~~~~T~--~g~pl~~aaala~L~~l~~-~~l~~~~~~~g~~  309 (395)
T PRK03715        239 IEP---DIM--TLGKGIGGGVPLAALLAKAEVAVF-EAGDQGGTY--NGNPLMTAVGVAVISQLLA-PGFLEGVRARGEY  309 (395)
T ss_pred             CCC---cee--eehhhhhCCcceEEEEEccccccc-cCCCcCCCC--CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence            987   675  89999964  45777888887532 222222333  4589999999999999975 4589999999999


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc---CeeEeccccCccccCCCCCeEEEEe
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA---GFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      |++.|+++....++..+ +..+.++.+.+.++        ....+.+.+.+.   |+++....         .+.+||+|
T Consensus       310 l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~--------~~~~~~~~~~~~~~~Gi~~~~~~---------~~~lR~~p  371 (395)
T PRK03715        310 LKEKLLELSEERGLEGE-RGEGLLRALLLGKD--------IGPQIVEKARDMQPDGLLLNAPR---------PNLLRFMP  371 (395)
T ss_pred             HHHHHHHHhhcCCcCeE-EcceeEEEEEecCc--------hHHHHHHHHHhccCCCEEEeecC---------CCEEEEeC
Confidence            99999874322344322 45688999988754        223444445555   99986433         37899999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++.+|++||++++++|+++++.+
T Consensus       372 ~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        372 ALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             CcccCHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999998764

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=100.00  E-value=1e-41  Score=335.12  Aligned_cols=342  Identities=23%  Similarity=0.359  Sum_probs=282.6

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhc-------CCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKN-------GVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~-------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a  152 (457)
                      .+++||+||+|||+..+|.+.+++.+++++|       |.+.++++.+.|..+.+.++|++||+++|.+.++++++|+.|
T Consensus         4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~~a   83 (370)
T PRK05937          4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGYMA   83 (370)
T ss_pred             CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChHHH
Confidence            5799999999999999999999999999998       588889999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      +...+..+.+++|.|+.+..+|.+++.+++........++++|++++++.++.....     ++++.+|+++++++++|.
T Consensus        84 ~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~v~~v~s~~G~  158 (370)
T PRK05937         84 NLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR-----SFGRIFIFVCSVYSFKGT  158 (370)
T ss_pred             HHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc-----CCCcEEEEEecCCCCCCC
Confidence            988777777889999999999999999998876566778999999999999764310     134567889999999999


Q ss_pred             CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCC
Q psy15447        233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~  312 (457)
                      +.|+++|.++|++||+++++||+|+.|.+|.+|.++...++..  +.++++.|+||++|+.|+.+++.++..+.+.....
T Consensus       159 i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~~~~~  236 (370)
T PRK05937        159 LAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSP  236 (370)
T ss_pred             ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHHHhCC
Confidence            9999999999999999999999999999999888776666653  33566789999999888777787777666665556


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK  391 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  391 (457)
                      ++.|+++.+|..++++.++++++.+. +..+++++++.+++.+.|..    .+       .++..++.++..        
T Consensus       237 ~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~----~~-------~~~~~~i~~~~~--------  297 (370)
T PRK05937        237 PLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS----AA-------PGCVQPIFLPGI--------  297 (370)
T ss_pred             CCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC----CC-------CCCEEEEEeCCh--------
Confidence            67888878888888888999988654 34667888888888887754    11       122334445432        


Q ss_pred             HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ....+.+.|.++||++....+|      ..+.+|++++..+|++||++++++|+++++++..
T Consensus       298 ~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~  353 (370)
T PRK05937        298 SEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK  353 (370)
T ss_pred             hHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence            3457888899999998865543      2468999999999999999999999999877643

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=3.2e-42  Score=343.88  Aligned_cols=359  Identities=14%  Similarity=0.122  Sum_probs=278.6

Q ss_pred             CceeeecCCC-cEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         63 SKYVVDQKSG-YIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        63 ~~~~i~~~~g-~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      .|+++.+++| .|||+ ||++||||.++   ..+|+. ||+|.+|+.+|+.+..+.+   +  +..++...+|+++|++.
T Consensus        63 ~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~-~p~v~~Ai~~ql~~l~~~~---~--~~~~~~~~~lae~L~~~  136 (459)
T PRK11522         63 YGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHR-NPVVVSAVQNQLAKQPLHS---Q--ELLDPLRAMLAKTLAAL  136 (459)
T ss_pred             CCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCC-CHHHHHHHHHHHhhCcccc---c--ccCCHHHHHHHHHHHHh
Confidence            4678999999 99995 99999999775   345654 8999999999999864432   1  23578889999999998


Q ss_pred             cC--CCcEEEecccHHHHHHHHHhhc---C---CCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447        138 MG--LEETALYSFGFSTSASAIAAYV---K---RNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ  197 (457)
Q Consensus       138 ~g--~~~~i~~~sG~~a~~~ai~a~~---~---~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~  197 (457)
                      ++  .++++|++||++|++.|++...   +   +.++|.....+|+.+...+.+++..            +..++++|.+
T Consensus       137 ~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~  216 (459)
T PRK11522        137 TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIE  216 (459)
T ss_pred             CCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHH
Confidence            75  4578899999999999998643   2   3457778889999988877766522            3356778999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-ccccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~  272 (457)
                      ++++.+++...     .++++++|++||+++++|.+.|    +++++++|++||++||+||+++ | +|++|.+ ..+++
T Consensus       217 ~l~~~l~~~~~-----~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~  289 (459)
T PRK11522        217 AMRTALSECKK-----TGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-G-MGRTGKMFACEHE  289 (459)
T ss_pred             HHHHHHHHhhc-----cCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-c-CCccchhhhhhcc
Confidence            99998865321     1246789999999999999887    9999999999999999999985 3 4666665 56889


Q ss_pred             CCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC  349 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~  349 (457)
                      |+.|   ||+  +++|++|.   +.|++++++++++.+......+..+.+.+|++|++++++|++++++ ++.+++++++
T Consensus       290 gv~P---Div--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~-~l~~~~~~~g  363 (459)
T PRK11522        290 NVQP---DIL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ-NLPAQAEQKG  363 (459)
T ss_pred             CCCC---CEE--EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHH
Confidence            9988   776  89999973   3567777888877664222122223335999999999999999765 5889999999


Q ss_pred             HHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        350 NTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       350 ~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++|++.|+++.. .+.+-...+..+.++.+.+.++.       ....+.+.|+++||++.+..       ...+.+|++|
T Consensus       364 ~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~-------~~~~i~~~l~~~Gvl~~~~~-------~~~~~lr~~P  429 (459)
T PRK11522        364 DYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-------IGYNFASEMFRQRVLVAGTL-------NNAKTIRIEP  429 (459)
T ss_pred             HHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch-------HHHHHHHHHHHCCeEEEecC-------CCCCEEEEEC
Confidence            999999987431 12111111356888999887653       56679999999999987542       1247999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      ++.+|++|+|+++++|+++++++...
T Consensus       430 pl~~t~~~id~~l~~l~~~l~~~~~~  455 (459)
T PRK11522        430 PLTLTIEQCEQVLKAARKALAAMRVS  455 (459)
T ss_pred             CccCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999887654

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=100.00  E-value=7.1e-42  Score=339.35  Aligned_cols=339  Identities=16%  Similarity=0.150  Sum_probs=266.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+. ||+|.+|+.++++++++.+.   .  ..++...+|+++|+++.
T Consensus        22 ~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~   95 (396)
T PRK04073         22 LPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHR-HPKIIQALKDQADKVTLTSR---A--FHSDQLGPWYEKVAKLT   95 (396)
T ss_pred             CCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCC-CHHHHHHHHHHHhhcccccc---c--cCCHHHHHHHHHHHhcC
Confidence            47789999999999 599999999765   235554 89999999999998765422   1  25688899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d  195 (457)
                      +.+++++++||++|++.|++...           ++.++|..+..+|+.+..++.+++..            +..++++|
T Consensus        96 ~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  175 (396)
T PRK04073         96 GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGD  175 (396)
T ss_pred             CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCC
Confidence            98899999999999999998763           34457778889999988887766522            35678889


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~  270 (457)
                      ++++++.+.           +++++|++||++|++|.+.|    +++|+++|++||+++|+||+|+.  +|++|..+ .+
T Consensus       176 ~~~l~~~i~-----------~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~  242 (396)
T PRK04073        176 LEALKAAIT-----------PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG--LGRTGKLFACD  242 (396)
T ss_pred             HHHHHHhcc-----------cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhC--CCcCcHHHHhh
Confidence            999988774           24689999999999999876    88999999999999999999873  45555543 35


Q ss_pred             ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      .+++.|   |++  ++||++|++   .|++++++++++.+.......+|  +.+|+.+++++++|+.+++. .+.++.++
T Consensus       243 ~~~~~p---di~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~--~~~~~~~aaa~aaL~~~~~~-~l~~~~~~  314 (396)
T PRK04073        243 WDNVTP---DMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGSTF--GGNPLACAVSIAALEVLEEE-KLPERSLE  314 (396)
T ss_pred             hcCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHhc-CHHHHHHH
Confidence            567665   666  799999754   48999999999887643333333  45999999999999988654 47788999


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +++++.+.|+++. .+.+... ++.+.++++.+..         ...+++++|+++||++.+..         ++++||+
T Consensus       315 ~~~~l~~~L~~l~-~~~i~~~-~~~g~~~~~~~~~---------~~~~~~~~l~~~Gv~~~~~~---------~~~iRi~  374 (396)
T PRK04073        315 LGEYFKEQLKEID-NPMIKEV-RGRGLFIGVELNE---------PARPYCEALKEEGLLCKETH---------ETVIRFA  374 (396)
T ss_pred             HHHHHHHHHHhhc-CCcccce-ecceEEEEEEecc---------hHHHHHHHHHHCCeEEecCC---------CCEEEEE
Confidence            9999999998832 1223222 3456777777653         34578899999999987532         3689999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~  448 (457)
                      |++.+|++|+++++++|++++
T Consensus       375 p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        375 PPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             CCcccCHHHHHHHHHHHHHHh
Confidence            999999999999999998875

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=100.00  E-value=1e-41  Score=337.89  Aligned_cols=352  Identities=14%  Similarity=0.111  Sum_probs=270.1

Q ss_pred             ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      ++++.+++|.|+|+ ||++||||.++   ..+|+. ||+|.+|+.+|+++..+.+   +  +..++...+|+++|++.++
T Consensus        58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~-hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~~lAe~L~~~~p  131 (442)
T TIGR03372        58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHR-NPNVIAAVENQLAKQPLHS---Q--ELLDPLRALLAKTLAALTP  131 (442)
T ss_pred             eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCC-CHHHHHHHHHHHHhCCCcc---c--ccCCHHHHHHHHHHHHhCC
Confidence            44567788899995 99999999775   345654 8999999999999865432   1  2357888999999999875


Q ss_pred             C--CcEEEecccHHHHHHHHHhhc------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHH
Q psy15447        140 L--EETALYSFGFSTSASAIAAYV------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHL  199 (457)
Q Consensus       140 ~--~~~i~~~sG~~a~~~ai~a~~------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~l  199 (457)
                      .  +.++|++||++|++.|++...      ++.++|.....+|+.+...+.+++.            .+..++++|.+.+
T Consensus       132 ~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~  211 (442)
T TIGR03372       132 GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAM  211 (442)
T ss_pred             CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHH
Confidence            3  567888999999999998643      3445777888899998887776542            2355678899998


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGV  274 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~  274 (457)
                      ++.+++...    . +..+++|++||+++.+|.+.|    +++++++|++||+++|+||+++ | +|++|.+ ..+++|+
T Consensus       212 ~~~l~~~~~----~-~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G-~GRtG~~~a~e~~gv  284 (442)
T TIGR03372       212 LKALNECKK----T-GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-G-MGRTGKMFACEHEGV  284 (442)
T ss_pred             HHHHHHHhc----C-CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-C-CCccccchhhhhcCC
Confidence            888864321    0 256899999999999999888    9999999999999999999984 2 4666665 5688999


Q ss_pred             CCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        275 STEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       275 ~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      .|   ||+  +++|++|.   +.|++++++++++.+......+..+.+.+|++|++++++|+++++++ +.++.++++++
T Consensus       285 ~P---Div--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~-l~~~~~~~G~~  358 (442)
T TIGR03372       285 QP---DIL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKN-LPAQAAIKGDF  358 (442)
T ss_pred             CC---Cee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhcc-HHHHHHHHHHH
Confidence            88   777  79999963   45777888888887742211122233359999999999999997654 88999999999


Q ss_pred             HHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        352 MHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       352 l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      +++.|+++.. .+..-...+..+.++.+.+.++.       ....+++.|+++||++.+..+       ..+.+||.|++
T Consensus       359 l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~-------~~~~i~~~l~~~Gvl~~~~~~-------~~~~lr~~Ppl  424 (442)
T TIGR03372       359 LLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE-------IGYAFAKELFQQNILVAGTLN-------NAKSIRIEPPL  424 (442)
T ss_pred             HHHHHHHHHHhCCCceEEEecceEEEEEEeCChH-------HHHHHHHHHHHCCcEEeecCC-------CCCEEEEECCc
Confidence            9999987432 12111112456889999887653       556899999999999875432       24799999999


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q psy15447        431 SHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~  448 (457)
                      .+|++|+|++++++++++
T Consensus       425 ~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       425 TITIEQCALVIKAAKDAL  442 (442)
T ss_pred             ccCHHHHHHHHHHHHHhC
Confidence            999999999999998763

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK07482 hypothetical protein; Provisional

Probab=100.00  E-value=3e-41  Score=338.19  Aligned_cols=363  Identities=14%  Similarity=0.114  Sum_probs=267.0

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+...   .....++...+|+++|++..
T Consensus        32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~---~~~~~~~~~~~lAe~L~~~~  107 (461)
T PRK07482         32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYG-RTEVAEAIAEQAKELAYYHT---YVGHGTEASITLSKRIIDRA  107 (461)
T ss_pred             CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCC-CHHHHHHHHHHHHhcCcccc---ccccCCHHHHHHHHHHHHhC
Confidence            47899999999999 599999999875   345554 89999999999998543221   11125788999999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe--cC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF--KH  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~--~~  193 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....||+.+..+..+++..            +..+  ++
T Consensus       108 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~  187 (461)
T PRK07482        108 PAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPH  187 (461)
T ss_pred             CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCc
Confidence            4  5688999999999999998653         24457777889999887766655421            1111  11


Q ss_pred             --C--------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        194 --N--------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       194 --~--------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                        +              +++++++.+.+..       ++++++|++||+++.+|.+.|    +++|+++|++||++||+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~D  260 (461)
T PRK07482        188 YYRRADAGMSEEQFSAYCADELEELILAEG-------PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIAD  260 (461)
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEe
Confidence              1              2456666664321       257899999999999898865    899999999999999999


Q ss_pred             cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447        254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  324 (457)
                      |+++ +|++|.  .+..+++|+.|   ||+  +++|++|+   +-|++++++++++.+...     ...+.++.+.+|++
T Consensus       261 EV~tGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~  333 (461)
T PRK07482        261 EVVTGFGRLGS--MFGSDHYGIEP---DLI--TVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPIC  333 (461)
T ss_pred             ccccCCCcCcc--hhhHHhcCCCC---CEE--EEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence            9974 555543  23468899988   787  79999953   346678888888876521     11122344469999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC  400 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l  400 (457)
                      ||+++++|+++++. ++.++.++++++|++.|+++....++....+..+.++.+.+..+...    ........++++.|
T Consensus       334 ~Aaa~a~L~~~~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~  412 (461)
T PRK07482        334 AAAALANLDILERE-NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA  412 (461)
T ss_pred             HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH
Confidence            99999999999765 48899999999999999764211222222245678888888643210    11112356789999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++|+++.+..        ..+.+|+.|++.+|++||++++++++++++++.
T Consensus       413 ~~~Gvl~~~~~--------~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~  456 (461)
T PRK07482        413 LERGVIARAMP--------HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL  456 (461)
T ss_pred             HHCCcEEecCC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999985421        147899999999999999999999999998763

>KOG1402|consensus

Probab=100.00  E-value=1e-42  Score=311.36  Aligned_cols=372  Identities=17%  Similarity=0.190  Sum_probs=295.1

Q ss_pred             CCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeec-CCccCCC-CChhhHHHHHHHHH
Q psy15447         32 HKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFAT-HNYLSFV-ENPDIEKCAIDCID  108 (457)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s-~~~l~~~-~~p~i~~a~~~~l~  108 (457)
                      ...+++++.++-.++..+.++|         -|.++.+++|+++|+ +|++|+||.| .+..+-+ +||.|.+++++|.+
T Consensus        19 ~~~aS~~~~~~E~k~~ahnyhp---------Lpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~   89 (427)
T KOG1402|consen   19 NTTASQQIMERENKYGAHNYHP---------LPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQAD   89 (427)
T ss_pred             CccchhhhhchhhhcccccCCc---------CceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHh
Confidence            3345777777777777777777         588899999999995 9999999965 3444444 59999999999999


Q ss_pred             hcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC--------C-C--CEEEEeCcccHHH
Q psy15447        109 KNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK--------R-N--DAVFVDENINFAI  177 (457)
Q Consensus       109 ~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~--------~-g--d~v~~~~~~h~~~  177 (457)
                      +.-+.   +|.+  .++...++++.+++++|.+.++-+++|.+|++.|++...+        | .  .++.....+|+.+
T Consensus        90 kLtls---sraf--Ynd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT  164 (427)
T KOG1402|consen   90 KLTLS---SRAF--YNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRT  164 (427)
T ss_pred             Hhhhh---hHHH--hhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCce
Confidence            86543   4444  3678889999999999999999999999999999987542        2 2  2455567789888


Q ss_pred             HHHHHhcCCe-------------EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHH
Q psy15447        178 QTGLIASRCK-------------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDIL  240 (457)
Q Consensus       178 ~~~~~~~g~~-------------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~  240 (457)
                      ..++++++-+             +..++++|.++|+.++++          ++.+++++||+++..|.+.|    |++++
T Consensus       165 ~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~----------~~vaaFivEPIQGEaGVvvP~~GYL~~vr  234 (427)
T KOG1402|consen  165 LGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS----------PNVAAFIVEPIQGEAGVVVPPPGYLKKVR  234 (427)
T ss_pred             eeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC----------CCeeEEEeeccccccceEeCCchhHHHHH
Confidence            8777766532             556788999999999986          67899999999999999977    89999


Q ss_pred             HHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCccee
Q psy15447        241 SLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCF  316 (457)
Q Consensus       241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~  316 (457)
                      +||++|++++|.||+|+.  +|++|+.+ +++.++.|   ||+  -|+|++++   +-..+.++++++..+.+..|+.+|
T Consensus       235 eLCtkynvl~I~DEvQTG--l~RTGk~la~d~env~P---Div--ilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTy  307 (427)
T KOG1402|consen  235 ELCTKYNVLLIADEVQTG--LARTGKLLACDYENVRP---DIV--ILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTY  307 (427)
T ss_pred             HHHHhhcEEEEehhhhhc--ccccCcEEEeehhhcCC---CeE--EEeccccCCeeeeEEEEecHHHHhccCCCcccccc
Confidence            999999999999999964  67778765 47777877   787  49999962   114477888888888888888777


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      ++  ||++|++++++|+++.++ .+.++.+.++..|+.+|.+++. .+++--..+..+.+..+.+......   ...+.+
T Consensus       308 gg--NpLg~~vaiAalevi~ee-kL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~---~~~aw~  381 (427)
T KOG1402|consen  308 GG--NPLGCAVAIAALEVIVEE-KLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS---GQDAWD  381 (427)
T ss_pred             CC--ChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc---chhHHH
Confidence            76  999999999999999875 5899999999999999998542 1222222245677777766532211   126788


Q ss_pred             HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +|-.|.++|++..+.+         .+.+||.||+.++++|+++.+++|.+++.
T Consensus       382 ~cl~lk~~g~LAkptH---------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  382 VCLALKENGLLAKPTH---------GNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             HHHcccccccccCCCC---------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            9999999999877644         57999999999999999999999988763

>PRK06062 hypothetical protein; Provisional

Probab=100.00  E-value=3.1e-41  Score=337.19  Aligned_cols=359  Identities=15%  Similarity=0.126  Sum_probs=270.0

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+...     ...++...+|+++|+++.
T Consensus        35 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~-----~~~~~~~~~lae~L~~~~  108 (451)
T PRK06062         35 NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQ-HPKVVAAIQEQAARLCTVAP-----AHANDARSEAARLIAERA  108 (451)
T ss_pred             CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCC-CHHHHHHHHHHHHhcCCcCC-----ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 499999999775   345654 89999999999998543321     125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCeE-----------EEe--cC-------
Q psy15447        139 G--LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCKV-----------QYF--KH-------  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~~-----------~~~--~~-------  193 (457)
                      +  .++++|++||++|++.|++..   +++.++|.....+|+.+..++.+++...           ..+  +.       
T Consensus       109 p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  188 (451)
T PRK06062        109 PGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFH  188 (451)
T ss_pred             CCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccC
Confidence            5  468899999999999999864   4667788889999999888877654211           111  11       


Q ss_pred             --CC-------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447        194 --NN-------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       194 --~d-------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                        +|       +++++++++...       ++++++|++||+++++|.+.|    +++|+++|++||++||+||+++.  
T Consensus       189 ~~~~~~~~~~~~~~le~~l~~~~-------~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG--  259 (451)
T PRK06062        189 ATTEEEECERALAHLERVIELEG-------PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG--  259 (451)
T ss_pred             CCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC--
Confidence              23       456677665321       257899999999999999988    99999999999999999999863  


Q ss_pred             ccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447        261 LGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK  336 (457)
Q Consensus       261 ~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~  336 (457)
                      +|++|.+ ..+++|+.|   ||+  +++|++|+   +.|++++++++++.+......+.++.+.+|++||+++++|++++
T Consensus       260 fGRtG~~~a~~~~gv~P---Di~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~  334 (451)
T PRK06062        260 FGRTGKWFAIEHFGVVP---DLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAME  334 (451)
T ss_pred             CCcCcHHHHHHhcCCCC---Cee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            5666665 458899988   676  89999963   45677888889888753321222333458999999999999997


Q ss_pred             hCcHHHHHHHHHH-HHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCeeEe
Q psy15447        337 ANPSLLTKLREKC-NTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFAIT  408 (457)
Q Consensus       337 ~~~~~~~~l~~~~-~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~v~  408 (457)
                      +.+ +.+++++++ +++++.|+++....+........+.++.+.+..+...       .........+.+.|+++||++.
T Consensus       335 ~~~-l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~  413 (451)
T PRK06062        335 EEG-IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPF  413 (451)
T ss_pred             hcC-HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEe
Confidence            764 889999998 5888888774321222111235677888877532110       0011235678999999999975


Q ss_pred             ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.          .+.+||+|++.+|++|||+++++++++++.+.
T Consensus       414 ~~----------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~  447 (451)
T PRK06062        414 VN----------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD  447 (451)
T ss_pred             ec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence            42          36899999999999999999999999998764

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-41  Score=338.91  Aligned_cols=361  Identities=18%  Similarity=0.214  Sum_probs=273.0

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|+++| .|||+||||.++   ..+|+. ||+|.+|+.+|++++++.+.+.    .+++.+.+|+++|+++++
T Consensus        26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~q~~~~~~~~~~~----~~~~~~~~la~~L~~~~~  100 (433)
T PRK08117         26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHR-HPKVVQAIKEQADKLMHGPSGV----IYYESILKLAEELAEITP  100 (433)
T ss_pred             CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccCccccc----cCCHHHHHHHHHHHHhCC
Confidence            3789999999999 599999999875   356654 8999999999999876544222    157889999999999983


Q ss_pred             --CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC--------
Q psy15447        140 --LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH--------  193 (457)
Q Consensus       140 --~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~--------  193 (457)
                        .+.++|++||++|++.|++.   ++++.++|..+..+|+.+..++.+++..             +..++.        
T Consensus       101 ~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (433)
T PRK08117        101 GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK  180 (433)
T ss_pred             CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccc
Confidence              45677779999999999986   4567788899999999988876655310             112222        


Q ss_pred             ---------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447        194 ---------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       194 ---------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                               ++++++++++++...      ++.+++|++||+++++|.+.|    +++|+++|++||++||+||+|+ | 
T Consensus       181 ~~~~~~~~~~~~~~l~~~~~~~~~------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G-  252 (433)
T PRK08117        181 GEDPEVCFLECLRDLESLFKHQVT------PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-G-  252 (433)
T ss_pred             cCchhHHHHHHHHHHHHHHHhccC------CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-c-
Confidence                     145567777654211      256899999999999999988    9999999999999999999997 4 


Q ss_pred             ccCCCCccc-cccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447        261 LGSTGHGVT-EYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA  337 (457)
Q Consensus       261 ~g~~g~~~~-~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~  337 (457)
                      +|++|.++. +++|+.|   |++  |++|++|.  +.|++++++++++.+....+..+|  +.+|++|++++++|+.+++
T Consensus       253 ~gr~G~~~~~~~~gv~p---Di~--t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~--~~np~~~aaa~a~L~~l~~  325 (433)
T PRK08117        253 FGRTGEWFAAQTFGVVP---DIM--TIAKGIASGLPLSAVVASKELMEQWPLGSHGTTF--GGNPVACAAALATLEVIKE  325 (433)
T ss_pred             cCccccchhHhhcCCCC---CEe--ehhhhccCCCcceeEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHh
Confidence            677777654 7788877   665  99999973  357889999988877544333333  4599999999999999865


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                      . .+.++++++++++++.|+++....++....+..+.++++.+..+. ...+......+.+.|+++||++.+..      
T Consensus       326 ~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~-~~~~~~~~~~~~~~l~~~Gv~~~~~g------  397 (433)
T PRK08117        326 E-KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPD-GEPDGDAVEKILDKCLEKGLLFYLCG------  397 (433)
T ss_pred             c-cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCC-CCcchHHHHHHHHHHHHCCCEEeecC------
Confidence            5 588999999999999998743111221112345667777775432 10111245678899999999886543      


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                       ...+++|++|++.+|++||++++++|+++++++.+
T Consensus       398 -~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~  432 (433)
T PRK08117        398 -NAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYEA  432 (433)
T ss_pred             -CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence             12479999999999999999999999999987654

>PRK06105 aminotransferase; Provisional

Probab=100.00  E-value=2.3e-41  Score=338.94  Aligned_cols=360  Identities=14%  Similarity=0.127  Sum_probs=270.9

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+. ||+|.+|+.+|+++.++....+   ...++...+|+++|++++
T Consensus        30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~~~---~~~~~~~~~lae~L~~~~  105 (460)
T PRK06105         30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFS-EQRLVEAAARQMKKLPFYHTFS---HKSHGPVIDLAEKLVAMA  105 (460)
T ss_pred             CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHHhCCCeeccc---ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999875   355664 8999999999999865422211   125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN  195 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d  195 (457)
                      +  .++++|++||++|++.|++...         ++.++|.....+|+.+..++.+++..            +..+++++
T Consensus       106 p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~  185 (460)
T PRK06105        106 PVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPH  185 (460)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCc
Confidence            5  3578899999999999998742         35567778899999988776665422            11222211


Q ss_pred             ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                        .+++++++....       ++++++||+||+++.+|.+.|    +++|+++|++||++||+|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~~-------~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~D  258 (460)
T PRK06105        186 YYRFGLPGESEEAFATRLANELEALILAEG-------PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVAD  258 (460)
T ss_pred             ccccccCCCChHHHHHHHHHHHHHHHHHcC-------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEe
Confidence                              245666664321       256899999999999998877    999999999999999999


Q ss_pred             cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-----cceecCCCcHHH
Q psy15447        254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-----GYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  324 (457)
                      |++ ++|++|.  .+..+++++.|   ||+  +++|++|+   +.|++++++++++.+.....     .+.++.+.+|++
T Consensus       259 Ev~tG~GRtG~--~f~~~~~~v~P---Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~  331 (460)
T PRK06105        259 EVICGFGRTGN--MFGCETFGIKP---DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVA  331 (460)
T ss_pred             ccccCCCcCch--hhhHHhcCCCC---Cee--eeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHH
Confidence            998 6766654  22457889988   777  89999963   47889999999888754211     133455579999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC  400 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l  400 (457)
                      |++++++|+++++. ++.+++++++++|++.|+++...+.+ ...+..+.+..+.+..+...    ........++...+
T Consensus       332 ~aaa~a~L~~i~~~-~l~~~v~~~g~~l~~~L~~l~~~~~v-~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~  409 (460)
T PRK06105        332 AAVALENLAIIEER-DLVGNAAERGARLQARLRALADHPLV-GEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAA  409 (460)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCe-EEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHH
Confidence            99999999999865 58999999999999999885322211 12245677888877533110    00112346788999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++|+++.+.          .+.+|++|++++|++|+|+++++++++++++.
T Consensus       410 ~~~Gvl~~~~----------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  451 (460)
T PRK06105        410 HEHGVISRAM----------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA  451 (460)
T ss_pred             HHCCeEEEec----------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence            9999998653          26899999999999999999999999998764

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=100.00  E-value=2.1e-41  Score=336.46  Aligned_cols=350  Identities=16%  Similarity=0.178  Sum_probs=272.4

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|+|+| .||++||||.+   ++++|++ ||+|.+|+.+|+.++.....     ...++.+.+|+++|+++.
T Consensus        21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~   94 (406)
T PRK12381         21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWHTGN-----GYTNEPVLRLAKKLIDAT   94 (406)
T ss_pred             CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhcccccC-----ccCCHHHHHHHHHHHhhC
Confidence            46789999999999 59999999987   4788987 99999999999987533221     124678899999999998


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~  197 (457)
                      +.+++++++||++|++.|++...         ++.++|..+..+|+.+..++.+++.            .+..++++|++
T Consensus        95 ~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  174 (406)
T PRK12381         95 FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLN  174 (406)
T ss_pred             CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHH
Confidence            88899999999999999998752         4456778899999999877777663            24567889999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      ++++.+.           +++++|++||+++++|.+.|    +++|+++|++||++||+||+|. | +|++|.++ .+++
T Consensus       175 ~l~~~l~-----------~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G-~gr~G~~~~~~~~  241 (406)
T PRK12381        175 SASALID-----------DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-G-VGRTGELYAYMHY  241 (406)
T ss_pred             HHHHhcc-----------CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-C-CCCCcchhhhHhh
Confidence            9998874           25689999999988886643    8999999999999999999984 3 35556554 3677


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.|   |++  |++|++|+  +.|++++++++++.+....+..+|  +.+|+.++++.++|+++++ ++++++++++.+
T Consensus       242 ~v~p---Di~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~--~~~pl~~aaa~a~l~~l~~-~~~~~~~~~~~~  313 (406)
T PRK12381        242 GVTP---DVL--TTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRHD  313 (406)
T ss_pred             CCCC---CEE--EehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence            8876   664  99999962  347888999999887644433333  4599999999999998864 358899999999


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      ++++.|+++....++....+..+.++++.+..+..     .....+.+.|+++||++.+..         ++.+||+|++
T Consensus       314 ~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~-----~~~~~~~~~l~~~Gv~v~~~g---------~~~lRl~p~~  379 (406)
T PRK12381        314 WFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA-----GKAKQISQEAAKAGVMVLIAG---------PNVVRFAPAL  379 (406)
T ss_pred             HHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh-----hHHHHHHHHHHHCCcEEeeCC---------CCEEEEeCCc
Confidence            99999987421111111113456777777754310     145678899999999986532         3689999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        431 SHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .+|++|+++++++|+++++++..
T Consensus       380 ~~t~~~i~~~~~~l~~~l~~~~~  402 (406)
T PRK12381        380 NISEEEITTGLDRFARACERFVS  402 (406)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999987643

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=100.00  E-value=2.1e-41  Score=335.45  Aligned_cols=346  Identities=14%  Similarity=0.103  Sum_probs=265.6

Q ss_pred             ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|+++|+ |||+||||.++   ..+|++ ||+|.+|+.+|+++..+...    ....++...+|+++|++..+
T Consensus        26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~~----~~~~~~~~~~la~~L~~~~p  100 (428)
T PRK07986         26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYN-HPQLNAAMKSQIDAMSHVMF----GGITHPPAIELCRKLVAMTP  100 (428)
T ss_pred             CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHhhcCCccc----cccCCHHHHHHHHHHHhhCC
Confidence            46799999999994 99999999875   355665 89999999999998653221    11257888999999999875


Q ss_pred             --CCcEEEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEe-----
Q psy15447        140 --LEETALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYF-----  191 (457)
Q Consensus       140 --~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~-----  191 (457)
                        .+++++++||++|++.|++...        ++.++|.....+|+.+..++.+++..             +...     
T Consensus       101 ~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~  180 (428)
T PRK07986        101 QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQS  180 (428)
T ss_pred             CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCc
Confidence              4678899999999999998643        34567888999999887776664421             1111     


Q ss_pred             ------cCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447        192 ------KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       192 ------~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                            +++|++++++.+++..        +.+++|++||+ ++.+|.+.|    |++|+++|++||++||+||++ .| 
T Consensus       181 ~~~~~~~~~d~~~l~~~l~~~~--------~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG-  250 (428)
T PRK07986        181 RFDGEWDERDIAPFARLMAAHR--------HEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TG-  250 (428)
T ss_pred             ccchhhHHHHHHHHHHHHHhCC--------CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC-
Confidence                  2356678888886432        56889999997 666665543    899999999999999999998 34 


Q ss_pred             ccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----CcceecCCCcHHHHHHHHHH
Q psy15447        261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLAVAANKA  331 (457)
Q Consensus       261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aaa~a~  331 (457)
                      +|++|.++ .+++|+.|   ||+  +++|++|+   +.|++++++++++.+....     ++.+|  +.+|++|++++++
T Consensus       251 ~GrtG~~fa~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~--~g~p~~~aaa~a~  323 (428)
T PRK07986        251 FGRTGKLFACEHAGIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTF--MGNPLACAVANAS  323 (428)
T ss_pred             CccCCCeeeecccCCCC---CEE--EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCC--CcCHHHHHHHHHH
Confidence            47777764 58899988   777  79999951   3455688899999886532     23334  4699999999999


Q ss_pred             HHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447        332 LHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS  411 (457)
Q Consensus       332 l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~  411 (457)
                      |+++++. ++.++++++.++|++.|+++...+.+.-+ +..+.++.+.+..+.       ....+.+.|+++|+++.+. 
T Consensus       324 L~~i~~~-~~~~~~~~~g~~l~~~l~~l~~~~~i~~v-Rg~Gl~~~ve~~~~~-------~~~~~~~~l~~~Gl~~~~~-  393 (428)
T PRK07986        324 LSLLESG-DWQQQVAAIEAQLREELAPLRDAPMVADV-RVLGAIGVVETTRPV-------NMAALQRFFVEQGVWIRPF-  393 (428)
T ss_pred             HHHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccceEEEEEeCCcc-------cHHHHHHHHHHCCcEEEec-
Confidence            9999866 47999999999999999885333333222 356788888887653       3557899999999998653 


Q ss_pred             cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                               .+.+|++|++.+|++|+++++++|+++++.
T Consensus       394 ---------g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        394 ---------GKLIYLMPPYIILPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence                     268999999999999999999999998753

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=6e-41  Score=332.66  Aligned_cols=350  Identities=14%  Similarity=0.136  Sum_probs=267.1

Q ss_pred             eeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-
Q psy15447         65 YVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-  139 (457)
Q Consensus        65 ~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-  139 (457)
                      .++++++|+|+| .||++||||.++   ..+|++ ||+|.+|+.+|++++.+...    ...+++...+|+++|++.++ 
T Consensus        28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~  102 (429)
T PRK06173         28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYN-HPRLNAAATNQLAKMSHIMF----GGFTHEPAVELAQKLLEILPP  102 (429)
T ss_pred             ceEEeceeeEEEcCCCCEEEEccchHHhccCCCC-CHHHHHHHHHHHHhcCCccc----cccCCHHHHHHHHHHHhhCCC
Confidence            468999999999 599999999774   345664 89999999999998653221    11257888999999999875 


Q ss_pred             -CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCC--
Q psy15447        140 -LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHN--  194 (457)
Q Consensus       140 -~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~--  194 (457)
                       .++++|++||++|++.|++...         ++.++|.....+|+.++.++.+++..             +..++.+  
T Consensus       103 ~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~  182 (429)
T PRK06173        103 SLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI  182 (429)
T ss_pred             CcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc
Confidence             5688999999999999998643         24457788889999887776654411             1122211  


Q ss_pred             ---------CHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447        195 ---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       195 ---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                               +++.+++.++...        +++++|++||+ ++.+|.+.|    +++|+++|++||++||+||+| .| 
T Consensus       183 ~~~~~~~~~~l~~l~~~i~~~~--------~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG-  252 (429)
T PRK06173        183 KFGEEWNDEAIEPLQDLLEQKG--------DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG-  252 (429)
T ss_pred             ccchhHHHHHHHHHHHHHHhCC--------CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cC-
Confidence                     3455666665322        57899999997 888888755    899999999999999999999 45 


Q ss_pred             ccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-Cccee--cCCCcHHHHHHHHHHHH
Q psy15447        261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-SGYCF--SASLPPFLAVAANKALH  333 (457)
Q Consensus       261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~aaa~a~l~  333 (457)
                      +|++|+++ .+++|+.|   ||+  +++|++|+   +.+.+++++++++.+.... ..+.+  +.+.+|+.|++++++|+
T Consensus       253 ~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~  327 (429)
T PRK06173        253 FGRTGKLFALEHAGVVP---DIM--CIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR  327 (429)
T ss_pred             CCcCCcchHHHhcCCCC---CEE--EeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence            58888875 68899987   777  69999952   3466788888888875321 11222  33469999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447        334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL  413 (457)
Q Consensus       334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~  413 (457)
                      ++++.+ ++++++++.++|++.|+++...+.+.- .+..++++.+.+.++.       ....+.+.|+++||++.+.+  
T Consensus       328 ~i~~~~-~~~~~~~~g~~l~~~L~~~~~~~~v~~-vRg~Gl~~~iel~~~~-------~~~~i~~~l~e~Gi~v~~~g--  396 (429)
T PRK06173        328 LLLESP-WQQNIQRIEAQLKQELAPAAEFDSVAE-VRVLGAIGVVEMKEPV-------NMATLQPRFVEHGIWVRPFG--  396 (429)
T ss_pred             HHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeee-eeccceEEEEEeCCcc-------cHHHHHHHHHHCCeEEEecC--
Confidence            998764 689999999999999986321222211 1356889999887653       45678999999999986532  


Q ss_pred             ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                              +.+||.||+.+|++|+++++++|+++++.+.+
T Consensus       397 --------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~  428 (429)
T PRK06173        397 --------KLVYIMPPFIISPDELSQLTSGLLRVLKQEYN  428 (429)
T ss_pred             --------CEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence                    68999999999999999999999999987643

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=100.00  E-value=9.5e-41  Score=332.80  Aligned_cols=356  Identities=18%  Similarity=0.193  Sum_probs=263.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|+|+| .||++||||.++   ..+|++ ||+|.+|+.+|++++.+.+.    +...++...+|+++|++++
T Consensus        28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~  102 (442)
T PRK13360         28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHG-RPEIVEAVRAQAGELDYAPA----FQMGHPKAFELANRIAEIA  102 (442)
T ss_pred             CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCC-CHHHHHHHHHHHHhCCCccc----CCcCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999765   345664 89999999999998654322    1225788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN-  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~-  194 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....+|+.+..++.+++..            +..++.. 
T Consensus       103 p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~  182 (442)
T PRK13360        103 PGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTL  182 (442)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCc
Confidence            4  5688999999999999998643         23457778888999988777665421            1222222 


Q ss_pred             C-----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        195 N-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       195 d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                      +                 .+++++.++...       ++++++|++||+++++|.+.|    +++|+++|++||++||+|
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~D  255 (442)
T PRK13360        183 DLARNAFSKGQPEHGAELADELERLVTLHD-------ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFD  255 (442)
T ss_pred             hhhccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence            1                 346677775422       257889999999999999988    999999999999999999


Q ss_pred             cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-----cceecCCCcHHH
Q psy15447        254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-----GYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~  324 (457)
                      |++ ++|++|.  .+..+++|+.|   ||+  +++|++|+   +.|.+++++++++.+.....     .+.++.+.+|+.
T Consensus       256 Ev~tG~GrtG~--~~a~~~~gv~P---Div--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~  328 (442)
T PRK13360        256 EVITGFGRLGA--PFAAQYFGVTP---DLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLA  328 (442)
T ss_pred             chhhCCCCCcc--chhhhhcCCCC---cee--eeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHH
Confidence            998 5655543  23457899987   676  89999963   35668889988887753210     122333469999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG  404 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G  404 (457)
                      |++++++|+++++.+ +.++++++.+++++.|+++...+.+.-+ ...+.+..+.+.......  ...+.++.+.|+++|
T Consensus       329 ~aaa~a~L~~l~~~~-l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG~Gl~~~~~l~~~~~~~--~~~~~~~~~~l~~~G  404 (442)
T PRK13360        329 CAAALATLDLYEREG-LLTRAARLAPYWEDALHSLRDAPHVIDI-RNLGLVGAVELAPRDGKP--GKRAYEVFLKCFEKG  404 (442)
T ss_pred             HHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCeeee-eccceEEEEEEecCCCCc--chhHHHHHHHHHHCC
Confidence            999999999998764 8899999999999999874322222111 234555555554221000  014567888999999


Q ss_pred             eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |++.+.          .+.+||+|++.+|++|||+++++|+++++++
T Consensus       405 vl~~~~----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        405 LMIRYT----------GDILALSPPLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             cEEEec----------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence            998653          2689999999999999999999999998764

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.1e-40  Score=333.10  Aligned_cols=354  Identities=14%  Similarity=0.151  Sum_probs=268.2

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|++++.+....    ...++...+|+++|++..
T Consensus        36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~lAe~L~~~~  110 (453)
T PRK06943         36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHA-NPRINAALKDQLDTLEHAMLA----GCTHEPAIELAERLAALT  110 (453)
T ss_pred             CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999875   345654 899999999999986543221    125788899999999988


Q ss_pred             CC--CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447        139 GL--EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN-  194 (457)
Q Consensus       139 g~--~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~-  194 (457)
                      +.  ++++|++||++|++.|++...         ++.++|.....||+.+..++.+++..            +..++.+ 
T Consensus       111 p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~  190 (453)
T PRK06943        111 GGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPD  190 (453)
T ss_pred             CCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCC
Confidence            63  578999999999999998752         34557888899999988777766522            1122211 


Q ss_pred             ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                      +++++++.+++.        ++++++|++|| +++.+|.+.|    +++|+++|++||++||+|
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D  262 (453)
T PRK06943        191 ARGARPGETAADVAARALADVRRLFAER--------AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD  262 (453)
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence                            245666676542        25789999999 4988888765    899999999999999999


Q ss_pred             cCc-ccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHH
Q psy15447        254 ESV-SFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~-~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~  324 (457)
                      |++ ++|+   +|.+ ..+++|+.|   ||+  +++|++|+   +.|++++++++++.+....    ..+..+.+.+|+.
T Consensus       263 EV~TG~GR---tG~~fa~~~~gv~P---Div--t~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~  334 (453)
T PRK06943        263 EIAVGCGR---TGTFFACEQAGVWP---DFL--CLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLA  334 (453)
T ss_pred             chhhCCCC---CcchhHHHhCCCCC---CeE--eeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHH
Confidence            997 4555   4544 458899988   787  79999962   4577889999988775311    0122233459999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG  404 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G  404 (457)
                      |++++++|+++++++ +.++.++++++|++.|+++...+.+.-+ +..+.++.+.+..+.+.  ......++.+.++++|
T Consensus       335 ~aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gvel~~~~~~--~~~~~~~i~~~~~~~G  410 (453)
T PRK06943        335 CRAALATLDLFAEDD-VLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIFAFDVALDGDA--ARTFSRRFFEAALERE  410 (453)
T ss_pred             HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEEEEEEccCCCc--chHHHHHHHHHHHHCC
Confidence            999999999998754 8899999999999999885434444322 45688888888632211  1113567889999999


Q ss_pred             eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        405 FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       405 i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +++.+..          +.+||+|++.+|++|||+++++++++++++
T Consensus       411 ll~~~~g----------~~l~~~Ppl~it~~eid~~~~~l~~al~~~  447 (453)
T PRK06943        411 LLLRPIG----------TTVYLMPPYVLDDDEIAWLAERTRATLDAT  447 (453)
T ss_pred             cEEEecC----------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence            9986532          579999999999999999999999999876

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=4.1e-41  Score=336.66  Aligned_cols=359  Identities=14%  Similarity=0.166  Sum_probs=269.5

Q ss_pred             ceeeecCCCcEEEE-CCeeeEEeecCCccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--
Q psy15447         64 KYVVDQKSGYIVNI-NGIPCINFATHNYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--  139 (457)
                      |+++++++|+|+|+ |||+||||+++++.+++ +||+|.+|+.+|++++.+.+  ++   ..++...+|+++|+++++  
T Consensus        55 ~~~i~~a~G~~l~D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~---~~~~~~~~lae~L~~~~p~~  129 (459)
T PRK06082         55 LDVLASAEGIYIEDVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RR---FTNETAIECAEKLTEIAGGE  129 (459)
T ss_pred             CceEEeeeeeEEEECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Cc---cCCHHHHHHHHHHHHhCCCC
Confidence            78899999999995 99999999876554444 69999999999999875432  11   247889999999999986  


Q ss_pred             CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCeE------------EEec--------CCC-
Q psy15447        140 LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCKV------------QYFK--------HNN-  195 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~~--------~~d-  195 (457)
                      .++++|.+||++|++.|++..   .++.++|.....+|+.+..++.+++...            ..++        .++ 
T Consensus       130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (459)
T PRK06082        130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA  209 (459)
T ss_pred             CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence            357888999999999999864   4567788889999999988887765321            1111        222 


Q ss_pred             -------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        196 -------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       196 -------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                             ++++++.+++.         +.+++|++||+++.++.+.|   +++|+++|++||++||+||+++.  +|++|
T Consensus       210 ~~~~~~~~~~l~~~i~~~---------~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG  278 (459)
T PRK06082        210 DGSDVHYADYLEYVIEKE---------GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNG--MGRTG  278 (459)
T ss_pred             hHHHHHHHHHHHHHHhcC---------CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccc
Confidence                   23456655431         36789999999987555556   89999999999999999999862  56667


Q ss_pred             Ccc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447        266 HGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL  341 (457)
Q Consensus       266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~  341 (457)
                      .++ .+++|+.|   ||+  +++|++|+   +.|.+++++++.+... ....+ ++.+.+|++|++++++|++++++ ++
T Consensus       279 ~~fa~e~~gv~P---Div--~~gKgl~gG~~P~~av~~~~~i~~~~~-~~~~~-~T~~gnpl~~aaa~a~L~~l~~~-~l  350 (459)
T PRK06082        279 EWFTHQAYGIEP---DIL--CIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSPLGCAAALATIEVIEQE-GL  350 (459)
T ss_pred             hhhHhHhhCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhcc-CCCCC-CCCCcCHHHHHHHHHHHHHHHhc-CH
Confidence            664 48899988   787  69999963   3467788887765432 11122 45567999999999999999765 48


Q ss_pred             HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447        342 LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ  420 (457)
Q Consensus       342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~  420 (457)
                      .+++++++++|++.|+++....++....+..+.++.+.+..+... .........+...++++|+++.+..         
T Consensus       351 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---------  421 (459)
T PRK06082        351 LEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ---------  421 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC---------
Confidence            999999999999999875321222222245688888888643211 1111235678889999999986532         


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447        421 KPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL  455 (457)
Q Consensus       421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~  455 (457)
                      .+.+|++|++++|++||+++++++++++.++.+.-
T Consensus       422 ~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~~  456 (459)
T PRK06082        422 GNVIQLSPPLIITREELTQALAILEEAIAKICQDF  456 (459)
T ss_pred             CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhhc
Confidence            47899999999999999999999999998875543

>PRK05965 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-40  Score=333.46  Aligned_cols=362  Identities=15%  Similarity=0.108  Sum_probs=268.0

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+..   ..+...++...+|+++|++.+
T Consensus        28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~~~~~~---~~~~~~~~~~~~lae~L~~~~  103 (459)
T PRK05965         28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYG-QESIVEAAAEQMRELPYAT---GYFHFGSEPAIRLAAKLAERA  103 (459)
T ss_pred             CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCC-CHHHHHHHHHHHHhcCCcc---cccccCCHHHHHHHHHHHhhC
Confidence            47899999999999 599999999764   345554 8999999999999854322   111225788889999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe--cC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF--KH  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~--~~  193 (457)
                      +  .++++|++||++|++.|++...         ++.++|.....||+.+..++.+++..            +..+  +.
T Consensus       104 p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~  183 (459)
T PRK05965        104 PGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPY  183 (459)
T ss_pred             CCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCc
Confidence            4  4678888999999999998643         13457778899999987766655421            1111  11


Q ss_pred             -------CCH--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        194 -------NNM--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       194 -------~d~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                             +|.        +++++.+++..       ++++++||+||+++.+|.+.|    +++|+++|++||++||+||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DE  256 (459)
T PRK05965        184 PYRNPVGDDPQAIIAASVAALRAKVAELG-------ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADE  256 (459)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence                   232        45666665432       257899999999999898765    8999999999999999999


Q ss_pred             Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----CcceecCCCcHHHH
Q psy15447        255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLA  325 (457)
Q Consensus       255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  325 (457)
                      +++ +|++|.  .+..+++|+.|   ||+  +++|++|+   +-|++++++++++.+....     ..+.++.+.+|++|
T Consensus       257 V~tGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~  329 (459)
T PRK05965        257 VITGFGRTGP--LFACEAEGVVP---DLM--TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSA  329 (459)
T ss_pred             hhccCccCch--hhhHhhcCCCC---CeE--EechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHH
Confidence            974 655553  23568899988   787  79999952   4577889999988775321     11223444699999


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI  401 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~  401 (457)
                      |+++++|++++++ ++.++.++++++|++.|+++...+.+. ..+..+.++.+.+..+...    .........+.+.|+
T Consensus       330 Aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~  407 (459)
T PRK05965        330 AVGLEVLRLYHEG-GLLANGQKAGPRFAAGLDALRAHPLVG-DVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAY  407 (459)
T ss_pred             HHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEE-EEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHH
Confidence            9999999999765 488999999999999998854322221 1245678888877542210    111124567889999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++|+++.+.+         .+.+|++|++.+|++|+++++++++++++++..
T Consensus       408 ~~Gll~~~~g---------~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~  450 (459)
T PRK05965        408 ANGLVFRAFG---------DGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA  450 (459)
T ss_pred             hCCeEEEecC---------CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence            9999987532         478999999999999999999999999987743

>PRK06541 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-40  Score=332.31  Aligned_cols=362  Identities=14%  Similarity=0.131  Sum_probs=269.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+...    +...++...+++++|+++.
T Consensus        34 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Av~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~  108 (460)
T PRK06541         34 PVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHG-RAELAEAAAKQAGTLAFFPL----WSYAHPPAIELAERLAALA  108 (460)
T ss_pred             CCceEEeCcccEEEeCCCCEEEECCccHHhccCCCC-CHHHHHHHHHHHhhCcCccc----cccCCHHHHHHHHHHHHhC
Confidence            37889999999999 599999999775   446665 89999999999998654321    1125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecC--
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKH--  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~--  193 (457)
                      +  .++++|++||++|++.|++...         ++.++|.....+|+.+..++.+++..            +..++.  
T Consensus       109 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~  188 (460)
T PRK06541        109 PGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTN  188 (460)
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCc
Confidence            5  4688999999999999998543         24567888999999988877765421            111221  


Q ss_pred             --------CCH--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        194 --------NNM--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       194 --------~d~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                              +++        +.+++.++...       ++.+++|++||+++++|.+.|    +++|+++|++||++||+|
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D  261 (460)
T PRK06541        189 FYRAPELGDDPEAFGRWAADRIEEAIEFEG-------PDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSD  261 (460)
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence                    222        45566664321       257899999999999999988    999999999999999999


Q ss_pred             cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHH
Q psy15447        254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVA  327 (457)
Q Consensus       254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa  327 (457)
                      |++ ++|++|.  .+..+++|+.|   ||+  +++|++|.   +.|++++++++++.+......  +.++.+.+|++|++
T Consensus       262 EV~tGfGR~G~--~~a~~~~gv~P---Div--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aa  334 (460)
T PRK06541        262 EVICAFGRLGE--MFGCERFGYVP---DII--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAV  334 (460)
T ss_pred             chhhCCCcCch--hhhhhhcCCCC---CEE--EecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHH
Confidence            998 6766654  22457789887   676  79999973   457788888888877533212  22355579999999


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------H-HHHHHHHHHHHHH
Q psy15447        328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------V-ASKKLLQTICDMC  400 (457)
Q Consensus       328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~-~~~~~~~~~~~~l  400 (457)
                      ++++++.+++. ++.+++++++++|++.|+++... .+.......+.++.+.+..+...      . ........+.+.|
T Consensus       335 ala~l~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~-~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l  412 (460)
T PRK06541        335 ALANLDIFERE-GLLDHVRDNEPAFRATLEKLLDL-PIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL  412 (460)
T ss_pred             HHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH
Confidence            99999998765 47899999999999999885322 22111245688888887543210      0 0111223678899


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++||++.+..       .+.+.+||+|++.+|++|||+++++++++++++.
T Consensus       413 ~~~Gi~~~~~~-------~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~  457 (460)
T PRK06541        413 FEAGLYCRADD-------RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW  457 (460)
T ss_pred             HhCCeEEEecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999987632       1247899999999999999999999999998754

>PRK07678 aminotransferase; Validated

Probab=100.00  E-value=8.1e-41  Score=334.49  Aligned_cols=364  Identities=13%  Similarity=0.133  Sum_probs=266.4

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+.+.     ...++...+|+++|+++++
T Consensus        30 p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~lae~l~~~~~  103 (451)
T PRK07678         30 TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYG-RKELAEAAYEQLKTLSYFPL-----TQSHEPAIKLAEKLNEWLG  103 (451)
T ss_pred             CeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCC-CHHHHHHHHHHHHhcCcccc-----ccCCHHHHHHHHHHHHhCC
Confidence            7889999999999 599999999775   345654 89999999999998643321     1246778999999999886


Q ss_pred             C-CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC---
Q psy15447        140 L-EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN---  194 (457)
Q Consensus       140 ~-~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~---  194 (457)
                      . +.++|++||++|++.|++...         ++..+|.....||+.+..++.+++..            +..++.+   
T Consensus       104 ~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (451)
T PRK07678        104 GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCY  183 (451)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccc
Confidence            4 467888999999999998642         23457778889999988877765421            1122211   


Q ss_pred             -----------CH---HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447        195 -----------NM---QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV  256 (457)
Q Consensus       195 -----------d~---~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~  256 (457)
                                 |.   +.+++.++...       ++++++||+||+++.+|.+.|    +++++++|++||++||+||++
T Consensus       184 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~  256 (451)
T PRK07678        184 RMPGIESEDIYDLECVKEIDRVMTWEL-------SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVI  256 (451)
T ss_pred             cccccCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence                       11   22455554221       257899999999999898876    899999999999999999997


Q ss_pred             -ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHHHHHH
Q psy15447        257 -SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFLAVAA  328 (457)
Q Consensus       257 -~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aaa  328 (457)
                       ++|++|.  .+..+++|+.|   ||+  +++|++|+   +-|++++++++++.+....    ..+..+.+.||++||++
T Consensus       257 tGfGRtG~--~~~~~~~gv~P---Div--t~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa  329 (451)
T PRK07678        257 CGFGRTGK--AFGFMNYGVKP---DII--TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALA  329 (451)
T ss_pred             hcCCcCch--hHHHHhcCCCC---CEE--EeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHH
Confidence             5666543  33457799988   787  89999963   3477889999998875321    11233445699999999


Q ss_pred             HHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch--HHHHHHHHHHHHHHHHcCee
Q psy15447        329 NKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE--VASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       329 ~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      +++|++++++ .+.+++++++++|++.|+++....++.......+.++.+.+..+...  +.+.....++++.|+++||+
T Consensus       330 ~a~l~~l~~~-~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~  408 (451)
T PRK07678        330 LKNLEIMENE-NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLI  408 (451)
T ss_pred             HHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcE
Confidence            9999999765 48899999999999999653211222222245688888887533211  11122467899999999999


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+.. |.+  +...+.+||+|++.+|++|||+++++++++++.+
T Consensus       409 ~~~~g-~~v--~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        409 IGKNG-DTV--AGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             EeecC-ccc--cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            86532 111  1224789999999999999999999999998765

>PLN02624 ornithine-delta-aminotransferase

Probab=100.00  E-value=1.5e-40  Score=334.69  Aligned_cols=351  Identities=16%  Similarity=0.158  Sum_probs=269.4

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|.|+| .||++||||.++   ..+|+ +||+|.+|+.+|+.++.+.+.  .   ..++...+|+++|++++
T Consensus        57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh-~~p~v~~ai~~ql~~~~~~~~--~---~~~~~~~~la~~L~~~~  130 (474)
T PLN02624         57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGH-CHPKIIKALTEQAEKLTLSSR--A---FYNDKFPEFAEYLTSMF  130 (474)
T ss_pred             CCceEEeeeeCEEEECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhcCCccc--c---cCCHHHHHHHHHHHhhc
Confidence            47889999999999 599999999875   22344 489999999999999765432  1   24788899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhcC-----C----C--CEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYVK-----R----N--DAVFVDENINFAIQTGLIASRC------------KVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~~-----~----g--d~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d  195 (457)
                      |.+.+++++||++|++.|++....     +    +  .+|.....+|+.+...+.+++.            .+..++++|
T Consensus       131 ~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d  210 (474)
T PLN02624        131 GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGD  210 (474)
T ss_pred             CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCC
Confidence            999999999999999999985432     1    2  3566677889988877766542            234678889


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~  270 (457)
                      ++.+++.++...        +.+++|++||+++++|.+.|    |++|+++|++||++||+||+|+ | +|++|.++. +
T Consensus       211 ~~~l~~~l~~~~--------~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G-~GrtG~~~a~~  280 (474)
T PLN02624        211 LDALEKIFEEDG--------DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-G-LARTGKMLACD  280 (474)
T ss_pred             HHHHHHHHHhCC--------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-cCcCcchhhHH
Confidence            999999997432        56889999999999999988    9999999999999999999996 3 567776544 5


Q ss_pred             ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      ++++.|   |++  +++|++|++   .|++++++++++.+....+..+|  +.+|+.++++.++|+.+++. ++.+++.+
T Consensus       281 ~~~i~p---Div--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~--~g~pl~~aaa~aaLe~l~~~-~l~~~~~~  352 (474)
T PLN02624        281 WEEVRP---DVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTF--GGNPLASAVAMAALQVVQDE-KLAERSAK  352 (474)
T ss_pred             hcCCCC---CEE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCC--CCCHHHHHHHHHHHHHHHhc-hHHHHHHH
Confidence            577766   676  689999743   47788888888776543333333  45999999999999988754 47788889


Q ss_pred             HHHHHHHHhhcccc-cCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEE
Q psy15447        348 KCNTMHSLLSQHKV-TQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIR  425 (457)
Q Consensus       348 ~~~~l~~~L~~~~~-~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lR  425 (457)
                      +.+++++.|+++.. .+. +... .+.+.++.+.+..+...   .....++++.|.++||++.+..         .+++|
T Consensus       353 ~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~~---~~~a~~~~~~L~e~GV~v~p~~---------~~~lR  419 (474)
T PLN02624        353 LGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKLG---PVSAYDVCLKLKERGLLAKPTH---------DTIIR  419 (474)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCcC---hHHHHHHHHHHHhCCeEEecCC---------CCEEE
Confidence            99999998877421 121 2212 34567777777543100   0145678999999999987643         47899


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        426 ITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       426 i~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      |+|++.+|++||++++++|+++++.
T Consensus       420 ~~p~l~~t~e~id~~l~~L~~~l~~  444 (474)
T PLN02624        420 LAPPLSISEDELQECSKALSDVLEH  444 (474)
T ss_pred             EECCccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988754

>PRK07481 hypothetical protein; Provisional

Probab=100.00  E-value=1.4e-40  Score=332.69  Aligned_cols=383  Identities=13%  Similarity=0.107  Sum_probs=272.7

Q ss_pred             CCCCCCccccc-cc-cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc
Q psy15447         48 PEPIVSKAEKF-KD-VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY  121 (457)
Q Consensus        48 ~~~~~~~~~~~-~~-~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~  121 (457)
                      ...+|+|.++. +. ...|+++++++|+||| .|||+||||.++   ..+|++ ||+|.+|+.+|+.+..+...   ...
T Consensus         7 ~~~~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~---~~~   82 (449)
T PRK07481          7 ARRFWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHN-REEVKEAIVRQLDELEYYST---FDG   82 (449)
T ss_pred             cccccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCC-CHHHHHHHHHHHHhccceec---ccc
Confidence            34455555544 32 2357899999999999 599999999764   345664 89999999999998554221   112


Q ss_pred             cChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe--
Q psy15447        122 GTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK--  187 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~--  187 (457)
                      ..++...+++++|+++++   .++++|++||++|++.|++...         ++..+|.....||+.+..++.+++..  
T Consensus        83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~  162 (449)
T PRK07481         83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF  162 (449)
T ss_pred             cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence            257889999999999874   4678899999999999998643         34457788889999888776655321  


Q ss_pred             ----------EEEe--------cCC--CHHHHHHHHHhh-chhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        188 ----------VQYF--------KHN--NMQHLEELLRQQ-DERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       188 ----------~~~~--------~~~--d~~~le~~l~~~-~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                +..+        +.+  |++++++.+.+. ........++++++|++||+++.+|.+.|    +++|+++
T Consensus       163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l  242 (449)
T PRK07481        163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV  242 (449)
T ss_pred             ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence                      1111        123  555544332211 00000011257899999999999998766    8999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-----Cc
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-----SG  313 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-----~~  313 (457)
                      |++||++||+||+++.  +|++|.+ ..+++|+.|   ||+  +++|++|+   +.|++++++++++.+....     ..
T Consensus       243 c~~~g~llI~DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~  315 (449)
T PRK07481        243 CDRHGILLIADEVVTG--FGRTGSWFGSRGWGVKP---DIM--CLAKGITSGYVPLGATMVNARIADAFEANADFGGAIM  315 (449)
T ss_pred             HHHcCCEEEEeehhhC--cCcCchhhHhhhcCCCC---CEE--EEeecccCCCcCceEEEEcHHHHHHHhccCccccccc
Confidence            9999999999999752  3444544 457899988   777  79999963   4577889999988875321     01


Q ss_pred             ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHH
Q psy15447        314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VAS  389 (457)
Q Consensus       314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~  389 (457)
                      +..+.+.+|++|++++++|+++++. .+.+++++++++|++.|+++....++.......+.++.+.+..+...    ...
T Consensus       316 h~~T~~gnpl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~  394 (449)
T PRK07481        316 HGYTYSGHPVACAAALATLDIVVRE-DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPS  394 (449)
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCch
Confidence            2223345999999999999999765 48899999999999999875421222222245678888887532110    111


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ......+.+.|+++|+++.+.+          +.+||+|++.+|++|||+++++++++++++.
T Consensus       395 ~~~~~~~~~~~~~~Gvl~~~~g----------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~  447 (449)
T PRK07481        395 KGYANAVADVARENGVLVRPSG----------TKIILSPPLVIQREDVDRIVDALDAGLSAVP  447 (449)
T ss_pred             hHHHHHHHHHHHhCCeEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            2245678889999999987542          4689999999999999999999999998764

>PRK07046 aminotransferase; Validated

Probab=100.00  E-value=3.6e-40  Score=328.98  Aligned_cols=407  Identities=11%  Similarity=0.093  Sum_probs=294.8

Q ss_pred             CccccccchhhhhhhHHHHHHHHHHhhccccCCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECC
Q psy15447          1 MIVTEQLDFYTSVGLFLPLTLFIVLSLSLSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-ING   79 (457)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G   79 (457)
                      |..|.|+|--.+.-.      -.-+.-.|.++...++++.+...+..|.+.............|.++++++|+|+| .||
T Consensus         1 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG   74 (453)
T PRK07046          1 MMTTHGIDLARAAAL------LARERARFLEAHPRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDG   74 (453)
T ss_pred             CCCcccCCHHHHHHH------HHHHHHHHHhcChhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCC
Confidence            556777776543221      1223344555555688999999999999873211111122368899999999999 599


Q ss_pred             eeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447         80 IPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA  156 (457)
Q Consensus        80 ~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a  156 (457)
                      |+||||.++   ..+|+ +||+|.+|+.+|+++. ...      ...++...+|+++|++.++.+++.|++||++|++.|
T Consensus        75 ~~yiD~~~g~g~~~lGh-~~p~i~~Av~~q~~~~-~~~------~~~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~A  146 (453)
T PRK07046         75 HRYDDFCLGDTGAMFGH-SPAPVARALAEQARRG-LTT------MLPSEDAAWVGEELARRFGLPYWQVATTATDANRFV  146 (453)
T ss_pred             CEEEEecccccccccCC-CCHHHHHHHHHHHHhC-CCC------CCCCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHH
Confidence            999999764   23454 4899999999999873 211      125788899999999998888999999999999999


Q ss_pred             HHh---hcCCCCEEEEeCcccHHHHHHHHh--c----------C------CeEEEecCCCHHHHHHHHHhhchhcccCCC
Q psy15447        157 IAA---YVKRNDAVFVDENINFAIQTGLIA--S----------R------CKVQYFKHNNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       157 i~a---~~~~gd~v~~~~~~h~~~~~~~~~--~----------g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      ++.   ++++..+|.....||+.+...+..  .          +      ..+..+++||++++++.+..          
T Consensus       147 lrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~----------  216 (453)
T PRK07046        147 LRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD----------  216 (453)
T ss_pred             HHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC----------
Confidence            975   456767788888999974332211  1          1      13456788999999998842          


Q ss_pred             CccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc
Q psy15447        216 VTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG  291 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg  291 (457)
                      +++++|++||++++.|.+.|    +++++++|++||++||+||++++ ++|..  +..+++|+.|   ||+  +++|++|
T Consensus       217 ~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tf-r~g~G--g~~~~~gv~P---Di~--t~gK~lg  288 (453)
T PRK07046        217 GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTI-SSGPG--GYTRAHGLEP---DFL--VVGKPIA  288 (453)
T ss_pred             CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccC-ccCCc--chhHHhCCCc---cce--eehhhhc
Confidence            46899999999999998877    89999999999999999999983 35542  3567789988   777  7999996


Q ss_pred             C--cccEEEecHHHHHHHHhhC------C-cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        292 S--VGGFCVGSSYIIEHHRLSG------S-GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       292 ~--~gG~v~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      +  +.|++++++++++.+....      . .+..+.+.+|+.|++++++|+++++. +..+++++++++|++.|+++...
T Consensus       289 gG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~  367 (453)
T PRK07046        289 GGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTE-AAYAHMLALAARLAAGLRAVIAR  367 (453)
T ss_pred             CCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHh
Confidence            3  4578899999998875321      1 12223456999999999999999755 47899999999999999764322


Q ss_pred             CCeEEeccCCCCeEEEEecCCcch---H----HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKSDDE---V----ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~~~~---~----~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      .++.......+.++.+.+..+...   .    .+......+...|+++||++.+.          .+.++++|+  ||++
T Consensus       368 ~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------~~~~~~~p~--~t~~  435 (453)
T PRK07046        368 HGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF----------HNMMLVCPA--TTAA  435 (453)
T ss_pred             CCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc----------cCcEEEeCC--CCHH
Confidence            333322233456666665332110   0    01224557888899999998753          246788875  8999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy15447        436 DMNSLIETLCKSHDIAV  452 (457)
Q Consensus       436 di~~~~~~l~~~~~~~~  452 (457)
                      |||+++++++++++++.
T Consensus       436 did~~~~~~~~~l~~~~  452 (453)
T PRK07046        436 DVDRLVAAFDACLGELL  452 (453)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999988653

>KOG1404|consensus

Probab=100.00  E-value=2.7e-41  Score=309.64  Aligned_cols=360  Identities=16%  Similarity=0.126  Sum_probs=274.2

Q ss_pred             cCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447         61 VSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS  136 (457)
Q Consensus        61 ~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~  136 (457)
                      ...|+.|++++|.||++ +|++|+|+.++   .-+|+ +||+|.+++.+|+.+..+...+.     .+++..+++++|++
T Consensus        30 ~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGH-chP~v~~a~~kQl~~l~H~t~~~-----~~~pi~~~Ae~L~s  103 (442)
T KOG1404|consen   30 YKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGH-CHPDVVAAAVKQLKKLYHTTSGY-----LNPPIHDLAEALVS  103 (442)
T ss_pred             ccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCC-CChHHHHHHHHhhhhhEEeeccc-----cCCcHHHHHHHHHH
Confidence            34689999999999995 99999998765   33555 49999999999998866554433     57788999999999


Q ss_pred             hcC--CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec------------CCC----
Q psy15447        137 FMG--LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCKVQYFK------------HNN----  195 (457)
Q Consensus       137 ~~g--~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~------------~~d----  195 (457)
                      .+.  .+.++|++||++||+.+++.   +++.-|+|.....||+.+...+.+.+......+            .+|    
T Consensus       104 ~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~  183 (442)
T KOG1404|consen  104 KLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRG  183 (442)
T ss_pred             hCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccc
Confidence            876  44678889999999999864   467779999999999999888877764433221            111    


Q ss_pred             -------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccC
Q psy15447        196 -------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGS  263 (457)
Q Consensus       196 -------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~  263 (457)
                             -+.-++..++..+...+..+.++++++.|++++.+|.+.+    |+++.++|+++|.++|.||+++ ||++| 
T Consensus       184 ~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-  262 (442)
T KOG1404|consen  184 IFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-  262 (442)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-
Confidence                   1122222222222222233467899999999999998865    8999999999999999999984 66665 


Q ss_pred             CCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447        264 TGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL  341 (457)
Q Consensus       264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~  341 (457)
                      + .+-++.+|+.|   ||+  |++|++|.  +-|+++.++++++.+..... +.++.+.+|++||+++++|++++++ .+
T Consensus       263 ~-~wgfe~h~v~P---DIv--TmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vikee-~L  334 (442)
T KOG1404|consen  263 H-MWGFESHGVVP---DIV--TMAKGIGNGFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVIKEE-NL  334 (442)
T ss_pred             c-cccccccCCCc---cHH--HHHhhccCCCcceeeecCHHHHHHHHhccc-cccccCCCchhHHHHHHHHHHHHHH-hH
Confidence            2 34467889988   677  99999963  45888999999998876552 3344456999999999999999876 48


Q ss_pred             HHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCc-c-hHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        342 LTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSD-D-EVASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~-~-~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                      +++..+.+.+|.+.|.+++  .+.++.++  ..+.++.+++.++. + ..++......+.+.|.++|+++..++.     
T Consensus       335 qE~aa~vG~yl~~~l~~l~--d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i-----  407 (442)
T KOG1404|consen  335 QENAAEVGSYLLEKLAALK--DKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI-----  407 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHh--hcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc-----
Confidence            8999999999999998854  34445444  45788888887665 2 244444667789999999999966543     


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                        ..+.+||.||+++|++|+|.+++..
T Consensus       408 --~G~vfriaPPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  408 --HGNVFRIAPPLCITKEDIDFAVEYF  432 (442)
T ss_pred             --cceEEEecCCeeccHHHHHHHHHHH
Confidence              3569999999999999998888866

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-40  Score=331.87  Aligned_cols=361  Identities=15%  Similarity=0.166  Sum_probs=269.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+.+|+++..+...    .+..++...+|+++|++.+
T Consensus        24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~   98 (445)
T PRK08593         24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGH-APPRVVEAIKAQADKFIHYTP----AYMYHEPLVRLAKKLCELA   98 (445)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence            37889999999999 599999999764   24566 489999999999998644321    1125788899999999987


Q ss_pred             CC---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC----
Q psy15447        139 GL---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN----  195 (457)
Q Consensus       139 g~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d----  195 (457)
                      +.   ++++|++||++|++.|++.   ++++.++|..+..||+.+..++.+++..             +..++.+|    
T Consensus        99 p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~  178 (445)
T PRK08593         99 PGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRG  178 (445)
T ss_pred             CCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence            52   4778889999999999985   4567778889999999998887766521             22233222    


Q ss_pred             ------H-------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccc
Q psy15447        196 ------M-------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSF  258 (457)
Q Consensus       196 ------~-------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~  258 (457)
                            .       +++++.+.+..      ..+.+++|++||+++++|.+.|    +++|+++|++||++||+||+++.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg  252 (445)
T PRK08593        179 MYEEPDANFVEEYLAPLKEMFEKYL------PADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQG  252 (445)
T ss_pred             cccCCcHHHHHHHHHHHHHHHHhhc------CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence                  2       22333332210      1256899999999999998876    99999999999999999999842


Q ss_pred             ccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447        259 GTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       259 g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~  335 (457)
                        +|++|.+ ..+++|+.|   ||+  |++|++|.  ++|++++++++++.+....  +.++.+.+|+.|++++++|+.+
T Consensus       253 --~GrtG~~~a~~~~gv~p---Di~--t~gK~l~~G~p~gav~~~~~i~~~~~~~~--~~~T~~~~pl~~aaa~a~l~~l  323 (445)
T PRK08593        253 --LGRTGKWSSISHFNITP---DLM--SFGKSLAGGMPMSAIVGRKEIMESLEAPA--HLFTTGANPVSCAAALATIDMI  323 (445)
T ss_pred             --CCcCchHHHHHhcCCCC---CEe--eecccccCCcccEEEEEcHHHHhhhccCC--CCCCCCCCHHHHHHHHHHHHHH
Confidence              3455554 457889987   676  89999963  4688999999998875332  3455567999999999999999


Q ss_pred             hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCc
Q psy15447        336 KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLD  414 (457)
Q Consensus       336 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~  414 (457)
                      ++. ++.+++++++++|++.|+++....++....+..+.++.+.+..+... ..+......+++.|+++||++.+..   
T Consensus       324 ~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~---  399 (445)
T PRK08593        324 EDE-SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA---  399 (445)
T ss_pred             Hhc-cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---
Confidence            765 58899999999999999874321222112235567777776532111 1112245679999999999986532   


Q ss_pred             cccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        415 QEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       415 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                            .+.+|++|++.+|++||++++++++++++++..
T Consensus       400 ------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~  432 (445)
T PRK08593        400 ------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA  432 (445)
T ss_pred             ------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence                  378999999999999999999999999987643

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2e-40  Score=331.88  Aligned_cols=363  Identities=14%  Similarity=0.146  Sum_probs=266.5

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++   ..+|+. ||+|.+|+.+|+.+..+..    .....++...+|+++|++.+
T Consensus        38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~----~~~~~~~~~~~la~~l~~~~  112 (443)
T PRK06058         38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNS-APRVVEAVREQVARFTHTC----FMVTPYEGYVAVAEQLNRLT  112 (443)
T ss_pred             CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCC-CHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999875   345654 8999999999999854221    11235788899999999987


Q ss_pred             CC---CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEE----ecCCC
Q psy15447        139 GL---EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRC-------------KVQY----FKHNN  195 (457)
Q Consensus       139 g~---~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~----~~~~d  195 (457)
                      +.   ++++|++||++|++.|++   .++++..+|.....+|+.+..++.+++.             .+..    ++.++
T Consensus       113 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (443)
T PRK06058        113 PGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRD  192 (443)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccccc
Confidence            52   578899999999999998   4567777888899999999888776541             1111    12222


Q ss_pred             H--------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        196 M--------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       196 ~--------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      +        +.+++.++.....   ..++++++|++||+++.+|.+.|    +++|+++|++||++||+||+++.  +|+
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~---~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG--fgR  267 (443)
T PRK06058        193 PKGLATDGEEAAARAITVIEKQ---VGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTG--FAR  267 (443)
T ss_pred             ccccccchHHHHHHHHHHHHHh---hCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCc
Confidence            1        2223333211100   00256899999999998888875    89999999999999999999852  345


Q ss_pred             CCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcH
Q psy15447        264 TGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPS  340 (457)
Q Consensus       264 ~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~  340 (457)
                      +|.+ ..+++|+.|   ||+  +++|++|+  +.|++++++++++.+....+..+|  +.+|++|++++++|+.+++. +
T Consensus       268 tG~~fa~~~~gv~P---Div--~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~L~~~~~~-~  339 (443)
T PRK06058        268 TGAWFACEHEGIVP---DLI--TTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTY--GGNPVACAAALAAIETIEED-D  339 (443)
T ss_pred             ChhhhHHHhcCCCC---CEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCC--CCCHHHHHHHHHHHHHHHHc-C
Confidence            5544 457889988   777  78999963  347889999998887644433344  46999999999999998765 4


Q ss_pred             HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447        341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ  420 (457)
Q Consensus       341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~  420 (457)
                      +.+++++++++|.+.|+++....++.....+.+.++.+.+..+.....+......+.+.|+++||++.+...       .
T Consensus       340 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~-------~  412 (443)
T PRK06058        340 LVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT-------Y  412 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC-------C
Confidence            889999999999999987432223222224567888887754311111122456788999999999976431       1


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        421 KPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+++|+.|++.+|++||+++++++++++++
T Consensus       413 ~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~  442 (443)
T PRK06058        413 GNVIRLLPPLVIGDELLREGLDVLEAALAD  442 (443)
T ss_pred             CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence            379999999999999999999999999865

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=100.00  E-value=1.9e-40  Score=331.15  Aligned_cols=382  Identities=14%  Similarity=0.155  Sum_probs=283.7

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccc-cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~  109 (457)
                      .++++.+..++..|.+..++.....+ ...|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+++.+|+++
T Consensus        52 ~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~-~p~v~~av~~ql~~  130 (474)
T PLN02482         52 KSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHA-DDEVLAALAETMKK  130 (474)
T ss_pred             HHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCC-CHHHHHHHHHHHhh
Confidence            36788899999999998877664432 2468899999999999 599999999764   335554 89999999999997


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHH--HHHh
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQT--GLIA  183 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~--~~~~  183 (457)
                      ... .      ...++...+|+++|++.++ .+.+.|++||++|++.|++.   ++++.++|.....||+.+..  ....
T Consensus       131 ~~~-~------~~~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~  203 (474)
T PLN02482        131 GTS-F------GAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAG  203 (474)
T ss_pred             CCC-C------CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcC
Confidence            421 1      1256788899999999774 67889999999999999975   45677788888899996422  1111


Q ss_pred             c-----------C------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        184 S-----------R------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       184 ~-----------g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                      +           +      ..+..+++||++++++.+++..        +.+++||+||+++++|.+.|    +++|+++
T Consensus       204 ~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~--------~~iAavI~Epv~g~~G~i~p~~~fl~~lr~l  275 (474)
T PLN02482        204 SGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANK--------GEIAAVILEPVVGNSGFIVPKKEFLEGLREI  275 (474)
T ss_pred             CCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCC--------CceEEEEECCCCCCCCCcCCCHHHHHHHHHH
Confidence            1           1      1356688999999999997532        57899999999999999887    6799999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSAS  319 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~  319 (457)
                      |++||++||+||++...+.|.  .+..+++|+.|   |++  +|+|++|+  +.|.+++++++++.+...... +..+.+
T Consensus       276 c~~~g~lLI~DEV~tGfR~g~--~ga~~~~gv~P---Di~--t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~  348 (474)
T PLN02482        276 TKENGALLVFDEVMTGFRIAY--GGAQEYFGITP---DLT--TLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLS  348 (474)
T ss_pred             HHHcCCEEEEeccccCeecCc--chHhHHhCCCC---CEE--EecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcc
Confidence            999999999999985324442  35567899987   675  89999963  346679999999988532211 122334


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLL  393 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~  393 (457)
                      .+|+.|++++++|+++++. ++.++++++.++|++.|+++....++++.......++.+.+..+..     . ..+....
T Consensus       349 gnpl~~aAala~L~~l~~~-~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~  427 (474)
T PLN02482        349 GNPLAMTAGIHTLKRLQQP-GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKF  427 (474)
T ss_pred             hhHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHH
Confidence            6999999999999999754 5899999999999999987432233333212223466666643210     0 1122245


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+.+.|+++||++.+..++        .  + .|++.||++|||+++++++++++++
T Consensus       428 ~~~~~~l~~~Gv~~~~~~~~--------~--~-~psl~ht~~dId~~l~al~~~l~~~  474 (474)
T PLN02482        428 ARFHRGMLEEGVYLAPSQFE--------A--G-FTSLAHTEEDIDFTIAAAERVLARI  474 (474)
T ss_pred             HHHHHHHHHCCeEEeccCCC--------C--C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence            67899999999999876532        1  1 3889999999999999999998753

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=100.00  E-value=2.5e-40  Score=328.98  Aligned_cols=347  Identities=19%  Similarity=0.221  Sum_probs=268.6

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCCccCCC---CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSFV---ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~---~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++.+++|.++|+ ||++||||+|+ |+++.   .||+|.+|+.++++++++.+   +.+  .++.+.+|+++|++++
T Consensus        19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l~~~l~~~~   92 (401)
T TIGR01885        19 LPVVFSKAEGVHVWDVEGKRYLDFLSA-YSAVNQGHCHPKIVKALTEQAQKLTLSS---RAF--YNDVFGEFAEYVTKLF   92 (401)
T ss_pred             CCceEEeeecCEEEeCCCCEEEEcccC-HhhccCCCCCHHHHHHHHHHHHhccccc---ccc--CCHHHHHHHHHHHhhc
Confidence            367788999999995 99999999984 54443   48999999999999876432   211  5788999999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc----------CCCCEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV----------KRNDAVFV-DENINFAIQTGLIASR------------CKVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~----------~~gd~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d  195 (457)
                      |.+.+++++||++|++.|++..+          ..++.|+. ...+|+++..++.+++            ..+..++++|
T Consensus        93 ~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  172 (401)
T TIGR01885        93 GYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNN  172 (401)
T ss_pred             CCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCC
Confidence            99999999999999999998742          12345554 4556888888888764            2356788999


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~  270 (457)
                      ++++++.+++..        +.+++|++||+++++|.+.|    +++|+++|++||+++|+||+|. | +|++|.++. +
T Consensus       173 ~~~le~~l~~~~--------~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g-~g~~G~~~~~~  242 (401)
T TIGR01885       173 LEALEEALEDHG--------PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G-LGRTGKLLCVD  242 (401)
T ss_pred             HHHHHHHHHhcC--------CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccchhhHHh
Confidence            999999997532        46789999999999999987    9999999999999999999984 3 566776643 4


Q ss_pred             ccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      ++++.|   |++  +++|++++.   .|++++++++++.++......+|+  .+|+.++++.++|+.+++. .+.+++++
T Consensus       243 ~~~~~~---di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a~L~~i~~~-~l~~~~~~  314 (401)
T TIGR01885       243 HENVKP---DIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVAALEVLEEE-KLAENAEK  314 (401)
T ss_pred             hcCCCC---CEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHH
Confidence            566655   666  688999642   367889999988876533333443  4899999999999998764 47789999


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +++++++.|+++.  .++....++.+.++.+.++.+..    .....+++++|.++||++.+..         .+.+||+
T Consensus       315 ~~~~~~~~L~~l~--~~~~~~~~g~g~~~~i~~~~~~~----~~~~~~l~~~l~~~Gv~v~~~~---------~~~lRi~  379 (401)
T TIGR01885       315 LGEIFRDQLKKLP--KPIITEVRGRGLLNAIVIDESKT----GRTAWDLCLKLKEKGLLAKPTH---------GNIIRLA  379 (401)
T ss_pred             HHHHHHHHHHhcc--CCceeEEeecCeeEEEEeccCcc----hhHHHHHHHHHHhCCEEEEecC---------CCEEEEe
Confidence            9999999999842  12211113467777777754320    0145689999999999987543         4789999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~  448 (457)
                      |++.+|++||++++++|++++
T Consensus       380 p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       380 PPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             CCccCCHHHHHHHHHHHHHHh
Confidence            999999999999999998875

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=4e-40  Score=328.82  Aligned_cols=353  Identities=14%  Similarity=0.119  Sum_probs=268.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .||++||||.++   ..+|++ ||+|.+|+++|+++......    ...+++...+|+++|++.+
T Consensus        24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~----~~~~~~~~~~la~~l~~~~   98 (423)
T PRK05964         24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHN-HPYIDQAIREQLDRLDHVIF----AGFTHEPAERLAQRLVALT   98 (423)
T ss_pred             CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCC-CHHHHHHHHHHHhhCCCccc----cccCCHHHHHHHHHHHHhC
Confidence            57899999999999 599999999764   345664 89999999999998643221    0125678899999999988


Q ss_pred             C--CCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRC--------------KVQYFKH  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~--------------~~~~~~~  193 (457)
                      +  .++++|++||++|++.|++..         .++.++|.....+|+.+...+.+++.              ....+++
T Consensus        99 p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~  178 (423)
T PRK05964         99 PGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPP  178 (423)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCc
Confidence            5  568899999999999999864         23556788899999988777665432              2334555


Q ss_pred             CC-----HHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 NN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 ~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      +|     ++++++.+++..        +.+++|++|| +++.+|...|    +++|+++|++||++||+||+|+.  +|+
T Consensus       179 ~d~~~~~~~~l~~~l~~~~--------~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr  248 (423)
T PRK05964        179 DGYEQATLDALEALLEKHA--------GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATG--FGR  248 (423)
T ss_pred             chhHHHHHHHHHHHHHhCC--------CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCc
Confidence            66     778888886432        5688999999 6888887765    89999999999999999999842  355


Q ss_pred             CCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh--CCccee--cCCCcHHHHHHHHHHHHHH
Q psy15447        264 TGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS--GSGYCF--SASLPPFLAVAANKALHLL  335 (457)
Q Consensus       264 ~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~aaa~a~l~~~  335 (457)
                      +|.++ .+++++.|   |++  +++|++++   +.|++++++++++.+...  ...+.+  +.+.+|+.|++++++++.+
T Consensus       249 ~G~~~a~~~~~v~p---Di~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l  323 (423)
T PRK05964        249 TGTLFACEQAGVSP---DIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLF  323 (423)
T ss_pred             CcchhHHHhcCCCC---Cee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHH
Confidence            66553 47788877   676  79999953   357789999999887532  111122  2246999999999999998


Q ss_pred             hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc
Q psy15447        336 KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ  415 (457)
Q Consensus       336 ~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~  415 (457)
                      ++. ++.++++++.+++++.|+++...+.+.- .+..+.++.+.+.++..    ......+.+.|.++||++.+..    
T Consensus       324 ~~~-~~~~~~~~~g~~l~~~l~~l~~~~~i~~-vrg~Gl~~~i~l~~~~~----~~~~~~l~~~l~~~Gv~v~~~~----  393 (423)
T PRK05964        324 EDE-PVLERVAALSAGLAEGLEPFRDLPGVAD-VRVLGAIGAVELDRPVL----ERDGPALRAFALERGVLLRPLG----  393 (423)
T ss_pred             Hhc-CHHHHHHHHHHHHHHHHHhhccCCCeEE-eecccEEEEEEeccCcc----hhHHHHHHHHHHHCCeEEEecC----
Confidence            765 4789999999999999987433333321 13457777887765320    0135678999999999987532    


Q ss_pred             ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        416 EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       416 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                            +.+||+|++.+|++|||+++++++++++++
T Consensus       394 ------~~lR~~p~l~~t~edId~~v~~l~~al~~~  423 (423)
T PRK05964        394 ------NTIYLMPPYIITAEELDRITDAIVEVADEL  423 (423)
T ss_pred             ------CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence                  689999999999999999999999998764

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=4.3e-40  Score=329.76  Aligned_cols=359  Identities=16%  Similarity=0.146  Sum_probs=267.5

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++.   .+|++ ||+|.+|+.+|++++.+...    ....++...+|+++|++++
T Consensus        38 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~~~~~----~~~~~~~~~~lae~L~~~~  112 (460)
T PRK06916         38 DPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQ-VPELDEAIREQLNKIAHSTL----LGLANVPSILLAEKLIEVV  112 (460)
T ss_pred             CCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCC-CHHHHHHHHHHHHhCCCccc----cccCCHHHHHHHHHHHHhC
Confidence            58899999999999 4999999998752   34654 89999999999998654322    1125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN-  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~-  194 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....||+.+..++.+++..            +..++.+ 
T Consensus       113 p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~  192 (460)
T PRK06916        113 PEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPY  192 (460)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCc
Confidence            6  3688999999999999998643         24457888999999998888776522            1112211 


Q ss_pred             ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                      +++++++.+++.        ++++++|++|| +++.+|.+.|    +++|+++|++||++||+|
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~--------~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D  264 (460)
T PRK06916        193 TYRSPYGNDKAEIVKKHLEELEELLKEK--------HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITD  264 (460)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHHhC--------CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee
Confidence                            234556666532        25789999999 6988888765    899999999999999999


Q ss_pred             cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447        254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  324 (457)
                      |++..  +|++|.+ ..+++|+.|   ||+  +++|++|+   +-|++++++++++.+...     ...+..+.+.+|+.
T Consensus       265 EV~TG--~GRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~  337 (460)
T PRK06916        265 EVATG--FGRTGKMFACEHENVTP---DIM--TAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLG  337 (460)
T ss_pred             chhhC--CCcCchhhHHHhcCCCC---Cee--eeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHH
Confidence            99742  3455554 457899988   777  79999962   346788899988876421     11122233459999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC  400 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l  400 (457)
                      |++++++|+.+++. ++.++++++++++++.|+++...+.+. .....+.++.+.+..+...    .........+.+.|
T Consensus       338 ~aaa~a~l~~l~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~  415 (460)
T PRK06916        338 CAVALANLELYEKT-NLIEQVARKTEYVATQLEDLFALKHVG-DIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS  415 (460)
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhhcCCCeE-EeecCCceeeEEeecccccccCCCchhhHHHHHHHHH
Confidence            99999999999765 488999999999999998854322221 1245678888877643211    01111245788999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +++||++.+.          .+.+|+.|++.+|++||++++++++++++++..
T Consensus       416 ~~~Gvl~~~~----------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06916        416 RELGMLTRPL----------GNTIVFMPPLASTIDELDEMLRILYKAISDVTE  458 (460)
T ss_pred             HHCCeEEEec----------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence            9999998653          268999999999999999999999999987653

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=6.2e-40  Score=328.41  Aligned_cols=356  Identities=13%  Similarity=0.108  Sum_probs=267.2

Q ss_pred             ceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|+|+|+ |||+||||.++   ..+|+. ||+|.+|+++|+++..+....    ...++...+|+++|+++.+
T Consensus        30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~l~~~~~~----~~~~~~~~~lae~L~~~~p  104 (466)
T PRK07030         30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHA-NPRINQRIKDQVDQLEHVILA----GFSHEPVIELSERLVKITP  104 (466)
T ss_pred             CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHHhCC
Confidence            46799999999995 99999999875   234554 899999999999986543221    1257888999999999874


Q ss_pred             --CCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC--
Q psy15447        140 --LEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN--  194 (457)
Q Consensus       140 --~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~--  194 (457)
                        .++++|++||++|++.|++..         .++..+|.....+|+.+..++.+++..            +..++.+  
T Consensus       105 ~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~  184 (466)
T PRK07030        105 PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDC  184 (466)
T ss_pred             CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCc
Confidence              468899999999999999865         234557888999999998888776532            1122221  


Q ss_pred             ---------------CHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        195 ---------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       195 ---------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                                     +++++++.+.+.        ++.+++|++|| +++.+|.+.|    +++|+++|++||++||+||
T Consensus       185 ~~~~~~~~~~~~~~~~l~~le~~~~~~--------~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE  256 (466)
T PRK07030        185 YLRPEGMSWEEHSRRMFAHMEQTLAEH--------HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDE  256 (466)
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEee
Confidence                           245566666532        26789999999 6988888765    8999999999999999999


Q ss_pred             Cc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHHH
Q psy15447        255 SV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFLA  325 (457)
Q Consensus       255 a~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  325 (457)
                      ++ ++|++|.  .+..+++|+.|   ||+  +++|++|+   +.|++++++++++.+...     ...+..+.+.+|++|
T Consensus       257 V~TGfGRtG~--~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~  329 (466)
T PRK07030        257 IAVGFGRTGT--MFACEQAGIRP---DFL--CLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLAC  329 (466)
T ss_pred             hhhCcCcccc--chHHHhcCCCC---CEE--eeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHH
Confidence            96 4655543  34458899988   787  79999962   457788999998877421     111223334599999


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI  401 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~  401 (457)
                      ++++++|+++++++ +.++.++++++|++.|+++...+.+.-+ ...+.++.+.+..+...    ........++.+.|+
T Consensus       330 aaa~a~L~~i~~~~-l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~  407 (466)
T PRK07030        330 AAALATLDIFEQDN-VIENNRALARRMAEATAHLADHPHVAEV-RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHAL  407 (466)
T ss_pred             HHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhcCCCEEEe-EeceeEEEEEeccCccccccCcchhHHHHHHHHHHH
Confidence            99999999998764 8899999999999999885433332222 45678888887543211    001113457889999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++|+++.+.          .+.+|+.|++.+|++||++++++++++++++
T Consensus       408 ~~Gvl~~~~----------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        408 ERGALLRPL----------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             HCCeEEEec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence            999998653          2689999999999999999999999999887

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=100.00  E-value=5.3e-40  Score=327.75  Aligned_cols=354  Identities=15%  Similarity=0.190  Sum_probs=264.2

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+.+|++++.+.+.    +...++...+|+++|++++
T Consensus        31 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~L~~~~  105 (445)
T PRK09221         31 APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGH-GRPEIVEAVARQAATLDYAPA----FQMGHPLAFELAERLAELA  105 (445)
T ss_pred             CCceEEeccccEEEeCCCCEEEEccccHhhccCCC-CCHHHHHHHHHHHHhccCccc----cccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999765   34565 489999999999998654322    1125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN  195 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d  195 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....||+.+..++.+++..            +..++.+.
T Consensus       106 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~  185 (445)
T PRK09221        106 PGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTL  185 (445)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCc
Confidence            5  4688999999999999998643         23457778899999988777665421            12222211


Q ss_pred             ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                        .+++++.++...       .+++++|++||+++.+|.+.|    +++|+++|++||++||+|
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D  258 (445)
T PRK09221        186 DLPENAFSKGQPEHGAELADDLERLVALHD-------ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD  258 (445)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence                              246666665432       257899999999999999988    999999999999999999


Q ss_pred             cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-------CCcceecCCCcH
Q psy15447        254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-------GSGYCFSASLPP  322 (457)
Q Consensus       254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-------~~~~~~~~~~~~  322 (457)
                      |+++.  +|++|.+ ..+++++.|   ||+  +++|+++.   +.|++++++++++.+...       .++++|  +.+|
T Consensus       259 EV~tG--~GRtG~~~~~~~~gv~P---Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~--~~~p  329 (445)
T PRK09221        259 EVITG--FGRLGAAFAAERFGVTP---DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTY--SAHP  329 (445)
T ss_pred             ehhhC--CCcCchhhHHHhcCCCC---CEE--EeccccccCcccceeeEEcHHHHHhhccCcccccccccccCC--CcCH
Confidence            99842  4555555 458899987   676  89999953   357788899988877531       123333  4699


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ  402 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~  402 (457)
                      +.|++++++|+++++. .+.+++++++++|++.|+++...+.+.- .+..+.+..+.+.......  ...+..+.+.|++
T Consensus       330 l~~aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~l~~l~~~~~v~~-vrg~Gl~~~v~~~~~~~~~--~~~~~~~~~~~~~  405 (445)
T PRK09221        330 VACAAGLATLDIYREE-DLFERAAELAPYFEDAVHSLKGLPHVID-IRNIGLVAGIELAPRPGAP--GARGYEAFMKCFE  405 (445)
T ss_pred             HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHhhccCCCEEE-EecCceEEEEEEecccccc--cchHHHHHHHHHH
Confidence            9999999999999766 4889999999999999988432222211 1344566666665321000  0134578899999


Q ss_pred             cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +||++.+.          .+.+||+|++.+|++||++++++|+++++++
T Consensus       406 ~Gv~~~~~----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        406 KGLLVRYT----------GDTIALSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             CCeEEeec----------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            99998643          3689999999999999999999999998764

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=5.8e-40  Score=327.10  Aligned_cols=380  Identities=14%  Similarity=0.165  Sum_probs=284.0

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccc--cCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHH
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKD--VSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCID  108 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~  108 (457)
                      ++.+..+.+.++.|.+..++......  ...|+++++++|+|+| .||++||||.++   ..+|+ +||+|.+|+.+|+.
T Consensus         5 ~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~   83 (428)
T PRK12389          5 KSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGH-AHPHITKAITEAAE   83 (428)
T ss_pred             hhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHH
Confidence            46688888999999988765443321  1357899999999999 499999999764   23555 48999999999998


Q ss_pred             hcCCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhc
Q psy15447        109 KNGVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIAS  184 (457)
Q Consensus       109 ~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~  184 (457)
                      +....       ...++...+|+++|++.++ .++++|++||++|++.|++..   +++..+|.....+|+.+...+..+
T Consensus        84 ~~~~~-------~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~  156 (428)
T PRK12389         84 NGVLY-------GTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAA  156 (428)
T ss_pred             hCCcc-------CCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhc
Confidence            74321       1257888999999998764 578899999999999999854   456678888999999887766654


Q ss_pred             C-------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447        185 R-------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS  241 (457)
Q Consensus       185 g-------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~  241 (457)
                      +                   ..+..++++|++.+++.+++..        +++++|++||+++++|.+.|    +++|++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~vaavi~EPv~g~~G~~~p~~~yl~~l~~  228 (428)
T PRK12389        157 GSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWG--------DEVAAVLVEPIVGNFGIVEPKPGFLEAVNE  228 (428)
T ss_pred             CCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcC--------CcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence            3                   1345677889999999987543        46899999999999999888    999999


Q ss_pred             HHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecC
Q psy15447        242 LRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSA  318 (457)
Q Consensus       242 l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~  318 (457)
                      +|++||++||+||+++.++++.  .+..+++|+.|   ||+  |++|++|+  +.|++++++++++.+...... +..+.
T Consensus       229 lc~~~g~llI~DEV~tG~Rt~~--~~a~~~~gv~P---Div--t~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~  301 (428)
T PRK12389        229 LAHEAGALVIYDEVITAFRFMY--GGAQDLLGVEP---DLT--ALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTM  301 (428)
T ss_pred             HHHHcCCEEEEEccccccccCc--chhhHHhCCCC---Cee--eechhhcCCCceeEEeEHHHHHhhhccCCCcccccCC
Confidence            9999999999999986435432  24567789988   676  89999963  346678999999887532211 22233


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcch------HHHHH
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDE------VASKK  391 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~------~~~~~  391 (457)
                      +.||++||+++++|++++++ ++.+++++++++|++.|+++....++.... ...+ ++.+.+..+...      ..+..
T Consensus       302 ~gnpl~~Aaala~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~  379 (428)
T PRK12389        302 AGNPASMAAGIACLEVLQQE-GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGE  379 (428)
T ss_pred             ccCHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHH
Confidence            56999999999999999765 488999999999999998743212321211 2233 666666432110      00112


Q ss_pred             HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ....+.+.|+++||++.+..+         +.  +.|++.+|++|++++++++++++++
T Consensus       380 ~~~~~~~~l~~~Gv~~~~~~~---------~~--~~~~l~~t~e~id~~~~~l~~~l~~  427 (428)
T PRK12389        380 AFGKFFKLMLNQGINLAPSKY---------EA--WFLTTAHTEEDIEETLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHHHCCcEeecCCC---------CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence            456789999999999976532         22  3578999999999999999999865

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=3e-40  Score=328.57  Aligned_cols=343  Identities=15%  Similarity=0.194  Sum_probs=270.9

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |.++++++|.++| .||++||||.+   ++++|+ +||++.+++.+++++++....    .| .++...+|+++|++++|
T Consensus        26 ~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~~----~~-~~~~~~~la~~l~~~~~   99 (398)
T PRK03244         26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHVSN----LF-ATEPQIALAERLVELLG   99 (398)
T ss_pred             CceEEEeeecEEEECCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccCccC----cc-CCHHHHHHHHHHHHhCC
Confidence            6789999999999 59999999987   467787 489999999999998764321    12 35667899999999987


Q ss_pred             C---CcEEEecccHHHHHHHHHhhcCCC--CEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q psy15447        140 L---EETALYSFGFSTSASAIAAYVKRN--DAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQHLEEL  202 (457)
Q Consensus       140 ~---~~~i~~~sG~~a~~~ai~a~~~~g--d~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~le~~  202 (457)
                      .   +++++++||++|+..+++....+|  ++|..+..+|+....++.+.+            .++..++++|++++++.
T Consensus       100 ~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~  179 (398)
T PRK03244        100 APEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAA  179 (398)
T ss_pred             CCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHh
Confidence            4   477888999999999998765454  677777889988777765554            23456778899999987


Q ss_pred             HHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCC
Q psy15447        203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTE  277 (457)
Q Consensus       203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~  277 (457)
                      +.           +++++|++||++|++|.+.|    +++|+++|++||++||+||+|+ | +|++|.++ .+++++.| 
T Consensus       180 ~~-----------~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g-~gr~g~~~~~~~~~~~p-  245 (398)
T PRK03244        180 VD-----------DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT-G-IGRTGAWFAHQHDGVTP-  245 (398)
T ss_pred             hc-----------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CcccchHHhhhhhCCCC-
Confidence            73           25689999999999999987    8899999999999999999986 2 56666543 35677766 


Q ss_pred             CccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                        |++  ||||++|+  +.|++++++++++.+....+..+|  +.+|+.++++.++|+.+++. ++.+++++++++|++.
T Consensus       246 --Di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~  318 (398)
T PRK03244        246 --DVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTF--GGNPVACAAALAVLDTIASE-GLLENAERLGEQLRAG  318 (398)
T ss_pred             --CEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCcCCC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHH
Confidence              665  89999973  348888888888887644344444  46999999999999988654 5789999999999999


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      |+++. .+.+.. .+..+.++++.++.+        ...++.+.|+++||++.+..         .+.+|++|+..+|++
T Consensus       319 L~~~~-~~~~~~-v~g~g~~~~i~~~~~--------~~~~~~~~l~~~Gv~~~~~~---------~~~iR~~p~~~~t~~  379 (398)
T PRK03244        319 IEALG-HPLVDH-VRGRGLLLGIVLTAP--------VAKAVEAAAREAGFLVNAVA---------PDVIRLAPPLIITDA  379 (398)
T ss_pred             HHhcC-CCceee-EeeccEEEEEEEecc--------HHHHHHHHHHHCCeEEeecC---------CCEEEEECCCcCCHH
Confidence            98832 111111 134678888888543        45679999999999997643         378999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy15447        436 DMNSLIETLCKSHDIAV  452 (457)
Q Consensus       436 di~~~~~~l~~~~~~~~  452 (457)
                      ||++++++|+++++++.
T Consensus       380 ~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        380 QVDAFVAALPAILDAAA  396 (398)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999998764

>PRK07480 putative aminotransferase; Validated

Probab=100.00  E-value=8e-40  Score=327.08  Aligned_cols=359  Identities=15%  Similarity=0.159  Sum_probs=262.9

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+. ||+|.+|+++|+++..+...   .+...++...+|+++|++.+
T Consensus        32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~  107 (456)
T PRK07480         32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYG-RKELADAAARQMRELPYYNT---FFKTTHPPAIELAAKLAEVA  107 (456)
T ss_pred             CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcCCccc---ccccCCHHHHHHHHHHHHhC
Confidence            46889999999999 599999999875   345554 89999999999998654221   11236789999999999988


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCC-
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHN-  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~-  194 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....||+.+..++++++..            +..++++ 
T Consensus       108 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~  187 (456)
T PRK07480        108 PPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPY  187 (456)
T ss_pred             CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCc
Confidence            5  4688999999999999998642         23346777888999988777765422            1112211 


Q ss_pred             --------C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        195 --------N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       195 --------d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                              +        .+++++.+.+..       ++++++||+||+++.+|.+.|    +++|+++|++||++||+||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DE  260 (456)
T PRK07480        188 WFGEGGDMTPEEFGLAAARQLEAKILELG-------ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADE  260 (456)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHHhcC-------CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence                    1        244444443221       257899999999999898876    8999999999999999999


Q ss_pred             Ccc-cccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh--hCCcceecCCCcHHHHHH
Q psy15447        255 SVS-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL--SGSGYCFSASLPPFLAVA  327 (457)
Q Consensus       255 a~~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~aa  327 (457)
                      +++ +|+   +|.+ ..+++|+.|   ||+  +++|++|+   +.|.+++++++++.+..  ....+.++.+.+|++||+
T Consensus       261 V~tGfGR---tG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aa  332 (456)
T PRK07480        261 VICGFGR---TGEWFGSQHFGIKP---DLM--TIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAV  332 (456)
T ss_pred             hhhCCCc---CcchhhhhhcCCCC---Cee--eeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHH
Confidence            984 544   4554 457899988   676  89999963   35777888888887732  111122333459999999


Q ss_pred             HHHHHHHHhhCcHHHHHH-HHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch--H--HHHHHHHHHHHHHHH
Q psy15447        328 ANKALHLLKANPSLLTKL-REKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE--V--ASKKLLQTICDMCIQ  402 (457)
Q Consensus       328 a~a~l~~~~~~~~~~~~l-~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~--~~~~~~~~~~~~l~~  402 (457)
                      ++++|+++++. ++.+++ ++++++|++.|+++... ++.......+.++.+.+..+...  .  ........+.+.|++
T Consensus       333 a~a~L~~l~~~-~l~~~~~~~~g~~l~~~l~~l~~~-~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (456)
T PRK07480        333 ALANLRILRDE-GIVERVRDDTGPYLQKRLRELADH-PLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA  410 (456)
T ss_pred             HHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHhhcC-CCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHH
Confidence            99999999765 488899 58999999999874322 21111235678888888543210  0  001123567888999


Q ss_pred             cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +|+++.+.          .+.+||+|++.+|++|||+++++++++++++.
T Consensus       411 ~Gll~~~~----------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~  450 (456)
T PRK07480        411 NGLIMRAV----------GDRMIISPPLVITHAEIDELVEKARKALDATA  450 (456)
T ss_pred             CCcEEeec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99998642          26899999999999999999999999998764

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=100.00  E-value=1.3e-39  Score=318.85  Aligned_cols=348  Identities=33%  Similarity=0.552  Sum_probs=282.5

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      ++|++|+|++|||..+||+|.+++.+++++++....+++...|..+...++++.+++++|.+..+++++|++++..++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~   80 (349)
T cd06454           1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLST   80 (349)
T ss_pred             CCceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHH
Confidence            57999999999999999999999999999887655555566678899999999999999998889999999999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      ++++||.|+++.++|.+...+++..|.++..++..|++++++.+++...      +.++++++++++++++|.+.|+++|
T Consensus        81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~------~~~~~~v~~~~~~~~tG~~~~~~~i  154 (349)
T cd06454          81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARR------PYGKKLIVTEGVYSMDGDIAPLPEL  154 (349)
T ss_pred             hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhhc------cCCCeEEEEeccccCCCCccCHHHH
Confidence            9999999999999999999888999999988888899999999876320      1356789999999999999999999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCC
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSAS  319 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~  319 (457)
                      .++|++||+++|+||+|++|.++..+.+. ..+.....+.|++++|++|++|+.||++++++++++.++.....+.++++
T Consensus       155 ~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~~~~  233 (349)
T cd06454         155 VDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTS  233 (349)
T ss_pred             HHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhccCC
Confidence            99999999999999999887776544332 12333345678999999999998899999999988887665545555556


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDM  399 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  399 (457)
                      .++..++++.++++.+.+.+..+++++++.+++.+.|++    .++++..++.+.+.++.+.++.       ...++.+.
T Consensus       234 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  302 (349)
T cd06454         234 LPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKE----LGFPVGGSPSHIIPPLIGDDPA-------KAVAFSDA  302 (349)
T ss_pred             CCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh----cCCcccCCCCCcEEEEeCCChH-------HHHHHHHH
Confidence            788888888899988765456788999999999999988    4666554434444444333222       45689999


Q ss_pred             HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      |.++||.+.+..++..  ....+++|++++..+|++|+++++++|+++
T Consensus       303 L~~~gI~~~~~~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         303 LLERGIYVQAIRYPTV--PRGTARLRISLSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             HHhCCceEEEecCCcc--CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence            9999999987544211  122479999999989999999999999864

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=3.9e-40  Score=326.49  Aligned_cols=383  Identities=15%  Similarity=0.149  Sum_probs=286.3

Q ss_pred             ChhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~  109 (457)
                      ++.+..+.+.++.|.+..++..... +...|+++++++|++|| .|||+||||.++   ..+|++ ||+|.+|+.+|+++
T Consensus         6 ~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~-~p~v~~ai~~q~~~   84 (433)
T PRK00615          6 EMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHS-HPKICDAIQQGAER   84 (433)
T ss_pred             HHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCC-CHHHHHHHHHHHHh
Confidence            3667788889999999877655432 22468899999999999 599999999775   234554 89999999999987


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHH---HHHH
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAI---QTGL  181 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~---~~~~  181 (457)
                      .. ..      ...++...+|.++|.+.++.  ++++|++||++|++.|++..   +++..+|.....+|+.+   ..++
T Consensus        85 ~~-~~------~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~  157 (433)
T PRK00615         85 GT-SY------GLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGI  157 (433)
T ss_pred             CC-CC------CCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCccc
Confidence            32 11      12567889999999998864  58899999999999999854   45666778888999965   4443


Q ss_pred             HhcC----------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447        182 IASR----------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS  241 (457)
Q Consensus       182 ~~~g----------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~  241 (457)
                      ..++                .....++++|++++++.+++..        +++++||+||++++.|.+.|    +++|++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavI~Epv~~~~G~~~p~~~yl~~l~~  229 (433)
T PRK00615        158 SFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG--------HRVAGVIFEPICANMGVVLPKPGFIEGIIQ  229 (433)
T ss_pred             ccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC--------CceEEEEECCCCCCCCcccCCHHHHHHHHH
Confidence            3322                1224567889999999997543        46789999999999999887    569999


Q ss_pred             HHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc-eecC
Q psy15447        242 LRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY-CFSA  318 (457)
Q Consensus       242 l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~-~~~~  318 (457)
                      +|++||++||+||++...++|.  .+..+++|+.|   ||+  +++|++|+  ++|++++++++++.+......+ ..+.
T Consensus       230 lc~~~g~llI~DEv~tG~R~G~--~ga~~~~gv~P---Di~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~  302 (433)
T PRK00615        230 TCRRTGSLSIMDEVVTGFRVAQ--GGAAAIYHVKP---DIT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTL  302 (433)
T ss_pred             HHHHcCCEEEEEcccccccccH--hHHHHhcCCCC---CeE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCC
Confidence            9999999999999984214442  45668899987   676  69999963  5789999999999885432212 1233


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch---H---HHHHH
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE---V---ASKKL  392 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~---~~~~~  392 (457)
                      +.+|+.|++++++|+++++++ ++++++++.++|++.|+++....++++.....+.++.+.+..+...   +   .+...
T Consensus       303 ~g~p~~~aa~la~L~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~  381 (433)
T PRK00615        303 SGNPLAMAAGKASINLCREQG-FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEA  381 (433)
T ss_pred             cccHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHH
Confidence            469999999999999997654 7999999999998888763222333322122577788877643211   0   12234


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ...+.+.|.++||++.+..++.           ..++..||++|||+++++++++++.+-
T Consensus       382 ~~~~~~~l~~~Gv~~~~~~~~~-----------~~ls~~ht~~did~~~~a~~~~~~~~~  430 (433)
T PRK00615        382 FQTFYQSAFSKGVYLSPSPFEA-----------SFLSSAHSMENLDYAQNVLIDSLEKVF  430 (433)
T ss_pred             HHHHHHHHHHCCeeecCccccc-----------cceecCCCHHHHHHHHHHHHHHHHHHh
Confidence            5689999999999998765421           256788999999999999999988764

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.2e-39  Score=326.10  Aligned_cols=359  Identities=13%  Similarity=0.091  Sum_probs=264.9

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+.+++++|+||| .|||+||||.++   ..+|+. ||+|.+|+.+|++++.+....    ...++...+|+++|++.++
T Consensus        47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~q~~~l~~~~~~----~~~~~~~~~lae~L~~~~p  121 (472)
T PRK08742         47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHA-EPRIGAAIAAQAGELEQVMLA----GFTHEPAVQLAEQLLAIAP  121 (472)
T ss_pred             CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCC-CHHHHHHHHHHHHhCCCcccc----ccCCHHHHHHHHHHHHhCC
Confidence            4578999999999 599999999875   345664 899999999999986543221    1246788999999999875


Q ss_pred             -------CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEe
Q psy15447        140 -------LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYF  191 (457)
Q Consensus       140 -------~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~  191 (457)
                             .++++|.+||++|++.|++...         ++..+|.....||+.+..++.+++..            +..+
T Consensus       122 ~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~  201 (472)
T PRK08742        122 RQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA  201 (472)
T ss_pred             CcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe
Confidence                   3578999999999999998652         24567888999999998887776532            1222


Q ss_pred             cCCC-----------------HHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcE
Q psy15447        192 KHNN-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQAR  249 (457)
Q Consensus       192 ~~~d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~  249 (457)
                      +.++                 ++.+++.+...        ++++++||+|| +++.+|.+.|    +++++++|++||++
T Consensus       202 ~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gil  273 (472)
T PRK08742        202 PSPDAYLAEPGQSAEDYALQAADALQALFEQS--------PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAF  273 (472)
T ss_pred             CCCCccccccCCCHHHHHHHHHHHHHHHHHhC--------CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCE
Confidence            2221                 34555665432        25789999999 6888887665    89999999999999


Q ss_pred             EEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCc
Q psy15447        250 IFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLP  321 (457)
Q Consensus       250 li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~  321 (457)
                      ||+||+++ +|++|.  .+..+++|+.|   ||+  +++|++|+   +-|++++++++++.+....    ..+..+.+.+
T Consensus       274 lI~DEV~TGfGRtG~--~~a~e~~gv~P---Div--~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gn  346 (472)
T PRK08742        274 LIADEIATGFGRTGT--LFACEQAGVMP---DLL--CLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGN  346 (472)
T ss_pred             EEEechhhCCCCCcc--chHHHhcCCCC---CEE--EEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCcc
Confidence            99999974 655543  33468899988   787  79999952   3577888999888764211    0122233459


Q ss_pred             HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHH
Q psy15447        322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTIC  397 (457)
Q Consensus       322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~  397 (457)
                      |++|++++++|++++++ ++.++.++++++|++.++.+...+.+.- .+..+.++.+.+..+...    .........+.
T Consensus       347 pl~~Aaa~a~L~~i~~~-~l~~~~~~~g~~l~~~~~~~~~~~~i~d-vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~  424 (472)
T PRK08742        347 PLACAAALATLDIFADD-DVIARNQPTAARMTQLAAQIGEHPHVAD-VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAY  424 (472)
T ss_pred             HHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHhcCCCeee-EeccceEEEEEeccCccccccCCchhHHHHHHH
Confidence            99999999999999876 4789999999999877766332222211 245688888888543211    01111346788


Q ss_pred             HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      +.|+++|+++.+.          .+.+||.||+.+|++|||+++++|+++++++..+
T Consensus       425 ~~~~~~Gll~~~~----------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~~~  471 (472)
T PRK08742        425 RAALARGVVLRPL----------GDVLYWMPPYCVDEAQLALLADTTRHAIDEAVAC  471 (472)
T ss_pred             HHHHHCCeEEEec----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhcc
Confidence            8999999998653          2789999999999999999999999999887654

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=100.00  E-value=6.1e-40  Score=326.27  Aligned_cols=348  Identities=15%  Similarity=0.174  Sum_probs=271.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|+++| .||++||||+++   +++|+ +||+|.+++.++++++....    . ..+++.+.+++++|+++.
T Consensus        22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~----~-~~~~~~~~~l~~~l~~~~   95 (403)
T PRK05093         22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHIS----N-VFTNEPALRLAKKLIDAT   95 (403)
T ss_pred             CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCccc----C-ccCCHHHHHHHHHHHhhC
Confidence            46789999999999 599999999885   78898 69999999999998854221    1 124677889999999998


Q ss_pred             CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~  197 (457)
                      +.+++++++||++|++.|++..         .++.++|..+..+|+++..++++.+            .++..++++|++
T Consensus        96 ~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  175 (403)
T PRK05093         96 FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLA  175 (403)
T ss_pred             CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHH
Confidence            8889999999999999999865         2456788889999999876655432            345678899999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      ++++.+.           +++++|++||+++++|.+.|    +++|+++|++||+++|+||+|+ | +|++|.+. .+++
T Consensus       176 ~l~~~l~-----------~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~  242 (403)
T PRK05093        176 AVKAVID-----------DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-G-MGRTGDLFAYMHY  242 (403)
T ss_pred             HHHHHhc-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCccchhhhhc
Confidence            9998874           25689999999988887754    8999999999999999999987 3 45556543 3567


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.|   |+.  ||||++++  +.|++++++++++.+.......++  +.+|+.++++.++|+.+.+ +++.++++++.+
T Consensus       243 ~~~p---di~--s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~--~~~~~~~~aa~a~L~~~~~-~~~~~~~~~~~~  314 (403)
T PRK05093        243 GVTP---DIL--TSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINT-PEVLEGVKARRQ  314 (403)
T ss_pred             CCCC---CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Confidence            7766   554  89999963  358899999998887643333333  4589999999999988854 457899999999


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      ++.+.|+++....++....+..+.++++.+.....     ....++++.|+++||++.+.+         .+++|++|+.
T Consensus       315 ~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~-----~~~~~~~~~l~~~Gv~v~~~g---------~~~lRl~~~~  380 (403)
T PRK05093        315 RFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK-----GRARDFLNAAAEEGVMVLVAG---------PDVLRFAPSL  380 (403)
T ss_pred             HHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch-----hHHHHHHHHHHHCCeEEecCC---------CCEEEEeCCC
Confidence            99999987321112212223457778887754210     135679999999999987532         4789999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHh
Q psy15447        431 SHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+|++++++++++|+++++.+
T Consensus       381 ~~~~~~i~~~~~~l~~~l~~~  401 (403)
T PRK05093        381 VIEEADIDEGLARFEKAVAKV  401 (403)
T ss_pred             CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999988764

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=8.7e-40  Score=324.01  Aligned_cols=353  Identities=13%  Similarity=0.101  Sum_probs=262.0

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+|+ ||++||||.++   ..+|++ ||+|.+|+.+|++++.+....    ..+++...+|+++|++..
T Consensus        22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~~~~~~~----~~~~~~~~~lae~L~~~~   96 (422)
T PRK05630         22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHG-HPRLKAAAHKQIDTMSHVMFG----GLTHEPAIKLTRKLLNLT   96 (422)
T ss_pred             CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCC-CHHHHHHHHHHHHhCCCcccC----CcCCHHHHHHHHHHHhhC
Confidence            578999999999995 99999999774   345554 899999999999986532211    125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHN  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~  194 (457)
                      +  .++++|++||++|++.|++...         ++..+|.....+|+.+..++.+++..             ...++.+
T Consensus        97 p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~  176 (422)
T PRK05630         97 DNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAP  176 (422)
T ss_pred             CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCC
Confidence            5  5688999999999999998643         23457788899999988877765421             1122211


Q ss_pred             -----CHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447        195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGST  264 (457)
Q Consensus       195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~  264 (457)
                           +.++++..++......    .+++++|++||+ ++.+|.+.|    +++|+++|++||++||+||++. | +|++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~----~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G-~Grt  250 (422)
T PRK05630        177 PVRGSSPQEISEYLRSLELLI----DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-G-FGRT  250 (422)
T ss_pred             cccCCChHHHHHHHHHHHHHH----hhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-C-CCcC
Confidence                 1222222222111000    136889999996 888887655    8999999999999999999984 3 3666


Q ss_pred             CCcc-ccccCCCCCCccEEEecCccccc---CcccEEEecHHHHHHHHhhC--C--cceecCCCcHHHHHHHHHHHHHHh
Q psy15447        265 GHGV-TEYFGVSTEEVDMIIGSLEHALG---SVGGFCVGSSYIIEHHRLSG--S--GYCFSASLPPFLAVAANKALHLLK  336 (457)
Q Consensus       265 g~~~-~~~~~~~~~~~Di~~~s~sK~lg---~~gG~v~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~aaa~a~l~~~~  336 (457)
                      |.++ .+++|+.|   ||+  +++|++|   .++|++++++++++.+....  .  .+..+.+.+|+.|++++++|++++
T Consensus       251 G~~~a~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~  325 (422)
T PRK05630        251 GELFATLAAGVTP---DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIE  325 (422)
T ss_pred             chhhHHHhcCCCC---Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHH
Confidence            6664 47889988   787  8999994   25788999999998875320  0  112233469999999999999998


Q ss_pred             hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447        337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE  416 (457)
Q Consensus       337 ~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~  416 (457)
                      ++ .+.++++++.++|++.|+++...+.+.-+ +..+.++.+.+.++.       .+..+.+.|+++|+++.+.      
T Consensus       326 ~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-Rg~Gl~~~ie~~~~~-------~~~~~~~~~~~~Gl~~~~~------  390 (422)
T PRK05630        326 TG-MWRKQVKRIEAELIAGLSPLAHLPGVADV-RVLGAIGVVEMEQPV-------DMEEATQAAVDHGVWLRPF------  390 (422)
T ss_pred             hC-cHHHHHHHHHHHHHHHHHHhhcCCCeeee-eccccEEEEEECCcc-------cHHHHHHHHHHCCeEEEec------
Confidence            76 47789999999999988764322333222 456889999887543       3457889999999998653      


Q ss_pred             cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                          .+.+||.|++.+|++|+|+++++|+++++.
T Consensus       391 ----g~~l~~~PpL~it~~~i~~~~~~l~~al~~  420 (422)
T PRK05630        391 ----GRLVYVMPPYITTSEQIAQICAALAAAVKA  420 (422)
T ss_pred             ----CCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence                268999999999999999999999998854

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1e-39  Score=326.02  Aligned_cols=361  Identities=15%  Similarity=0.161  Sum_probs=268.6

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|||+ ||++||||.++   ..+|+. ||+|.+|+.+|+++..+...    .+.+++...+|+++|++..
T Consensus        35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~Ai~~ql~~~~~~~~----~~~~~~~~~~lae~L~~~~  109 (457)
T PRK05639         35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYS-HPKLVKAVQEQVALIQHSMI----GYTHSERAIRVAEKLAEIS  109 (457)
T ss_pred             CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCC-CHHHHHHHHHHHHhcccccc----CccCCHHHHHHHHHHHhhC
Confidence            378899999999995 99999999875   345654 89999999999998543221    1224678889999999987


Q ss_pred             CC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCCC-----
Q psy15447        139 GL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHNN-----  195 (457)
Q Consensus       139 g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~d-----  195 (457)
                      +.  ++++|++||++|++.|++..   +++.++|.....+|+.+..++.+++.             .+.++++++     
T Consensus       110 p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  189 (457)
T PRK05639        110 PIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNP  189 (457)
T ss_pred             CCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccc
Confidence            63  57899999999999999864   46667788899999998877766541             133344332     


Q ss_pred             --------HHH--------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447        196 --------MQH--------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       196 --------~~~--------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa  255 (457)
                              .++        +++.+....     ..++++++||+||+++.+|.+.|    +++|+++|++||++||+||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~le~~l~~~~-----~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv  264 (457)
T PRK05639        190 WGINGYEEPDELINRFLDYLENYVFSHV-----VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV  264 (457)
T ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHhh-----cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence                    222        233322110     01367899999999999898766    89999999999999999999


Q ss_pred             cccccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        256 VSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       256 ~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      ++ | +|++|.+ ..+++|+.|   ||+  +++|++|.  +.|++++++++++. ...  .+.++.+.+|+.|++++++|
T Consensus       265 ~t-G-~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~pi~av~~~~~i~~~-~~~--~~~~T~~g~p~~~aaa~a~l  334 (457)
T PRK05639        265 QT-G-IGRTGKWFASEWFEVKP---DLI--IFGKGVASGMGLSGVIGRKELMDL-TSG--SALLTPAANPVISAAAEATL  334 (457)
T ss_pred             hh-c-cCcCchHHHHHhcCCCC---CEE--EechhhcCCCcceeEEehHHHHhh-cCC--CcccCCCcCHHHHHHHHHHH
Confidence            86 4 6777776 457899987   787  69999963  34788999998883 222  23355567999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH  412 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~  412 (457)
                      +.++++ ++.++.++++++|++.|+++....++....+..+.++.+.+..+... .+......+.+.|+++|+++.+.. 
T Consensus       335 ~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~-~~~~~~~~~~~~~~~~Gv~~~~~g-  411 (457)
T PRK05639        335 EIIEEE-NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK-PDPELTGKICWRAFELGLILPSYG-  411 (457)
T ss_pred             HHHHHc-cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC-CCHHHHHHHHHHHHhCCeEEeecC-
Confidence            999765 47889999999999999874321222222245677888877543211 111245678999999999987542 


Q ss_pred             CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                            ...+.+||.|++.+|++|+|+++++++++++.+.
T Consensus       412 ------~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        412 ------MFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             ------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence                  1247999999999999999999999999988764

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=4.3e-40  Score=326.31  Aligned_cols=343  Identities=15%  Similarity=0.160  Sum_probs=264.4

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|..+++++|+++| .||++||||.+   ++++|+ +||+|.+|+.+|+++......   .  ..++.+.+++++|+++.
T Consensus        13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~---~--~~~~~~~~la~~l~~~~   86 (389)
T PRK01278         13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWHVSN---L--YRIPEQERLAERLVENS   86 (389)
T ss_pred             CCceEEeeecCEEEECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCcccc---c--cCChHHHHHHHHHHhhC
Confidence            47889999999999 59999999987   467888 599999999999987433211   1  25788899999999998


Q ss_pred             CCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~  197 (457)
                      +.+++++++||++|++.++++.         .++.++|..+..+|+.+..+...++..            +..++++|++
T Consensus        87 ~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  166 (389)
T PRK01278         87 FADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIE  166 (389)
T ss_pred             CCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHH
Confidence            8889999999999999999876         223357777888998887776665432            2245678999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      ++++.++           +++++|++||+++++|... |   +++|+++|++||++||+||+|+ | +|++|.++ .+++
T Consensus       167 ~l~~~l~-----------~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g-~g~~g~~~~~~~~  233 (389)
T PRK01278        167 ALKAAIT-----------PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-G-MGRTGKLFAHEWA  233 (389)
T ss_pred             HHHHhhC-----------CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCCcceeeccc
Confidence            9998884           2568999999999988544 3   8999999999999999999997 2 45555543 3567


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.|   |++  |+||++++  +.|++++++++++.+....+..+|  +.+|+.+++++++++.+++. +..++++++.+
T Consensus       234 ~~~p---di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~aaa~a~l~~l~~~-~~~~~~~~~~~  305 (389)
T PRK01278        234 GVTP---DIM--AVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTY--GGNPLAMAVGNAVLDVILAP-GFLDNVQRMGL  305 (389)
T ss_pred             CCCC---CEE--EEehhccCCcceEEEEEcHHHHhccCCCCCCCCC--CccHHHHHHHHHHHHHHhhh-HHHHHHHHHHH
Confidence            7766   554  89999963  458899999888877654444444  45899999999999988643 47788889999


Q ss_pred             HHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        351 TMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       351 ~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      ++++.|+++.. .+++.....+.+.++++.+..         ...+++++|+++||++.+..         .+++||+|+
T Consensus       306 ~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~---------~~~~~~~~l~~~GV~~~p~~---------~~~lR~~p~  367 (389)
T PRK01278        306 YLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV---------PNRDLVQALRDEGLLTVGAG---------DNVVRLLPP  367 (389)
T ss_pred             HHHHHHHHHHhhCCCceeeEecccEEEEEEEec---------CHHHHHHHHHHCCeEEeecC---------CCEEEEeCC
Confidence            99888876321 121211113456677776643         24579999999999987653         478999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.+|++++++++++|+++++.
T Consensus       368 ~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        368 LIITEEEIDEALERLERAAES  388 (389)
T ss_pred             cccCHHHHHHHHHHHHHHHHh
Confidence            999999999999999998764

>PRK07036 hypothetical protein; Provisional

Probab=100.00  E-value=2.7e-39  Score=324.10  Aligned_cols=360  Identities=16%  Similarity=0.144  Sum_probs=264.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+.+..+...   .....++...+|+++|++..
T Consensus        33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~~~~~---~~~~~~~~~~~lae~L~~~~  108 (466)
T PRK07036         33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYG-REEMADAIADQARRLPYYTP---FGDMTNAPAAELAAKLAELA  108 (466)
T ss_pred             CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCC-CHHHHHHHHHHHHhCccccc---ccccCCHHHHHHHHHHHHhC
Confidence            47899999999999 599999999765   345664 89999999999998543221   11125788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN  195 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d  195 (457)
                      +  .+.++|++||++|++.|++...         ++..+|.....||+.+..++.+++..            +..++.++
T Consensus       109 p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~  188 (466)
T PRK07036        109 PGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPN  188 (466)
T ss_pred             CCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCc
Confidence            5  4678899999999999998642         24457778889999988777665522            12222111


Q ss_pred             -----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        196 -----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       196 -----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                                       .+.+++.+....       ++.+++|++||+++.+|.+.|    +++|+++|++||+++|+||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DE  261 (466)
T PRK07036        189 PYRRPAGMSEAAFCDFLVDEFEDKILSLG-------ADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDE  261 (466)
T ss_pred             ccccccCCChHHHHHHHHHHHHHHHHHcC-------CCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEee
Confidence                             123444443211       367899999999999999877    8999999999999999999


Q ss_pred             Cc-ccccccCCCCcccc-ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh---C--CcceecCCCcHHH
Q psy15447        255 SV-SFGTLGSTGHGVTE-YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS---G--SGYCFSASLPPFL  324 (457)
Q Consensus       255 a~-~~g~~g~~g~~~~~-~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~---~--~~~~~~~~~~~~~  324 (457)
                      ++ ++|++|.  .+..+ ++|+.|   ||+  +++|++|+   +.|++++++++++.+...   .  ..+.++.+.+|++
T Consensus       262 V~tGfGRtG~--~~~~~~~~gv~P---Div--t~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~  334 (466)
T PRK07036        262 VVTGFGRLGH--FFASEAVFGIQP---DII--TFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVA  334 (466)
T ss_pred             chhCCCcCch--hhhhhhhcCCCC---CEE--EEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHH
Confidence            97 4555542  23344 789988   777  89999963   357788999999887532   1  0112233469999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC  400 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l  400 (457)
                      |++++++|+++++. ++.+++++++++|++.|+++...+-+ ......+.++.+.+..+...    ..+......+.+.|
T Consensus       335 ~aaa~a~Le~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~v-~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~  412 (466)
T PRK07036        335 CAAALKNIEIMERE-GLCEHVREVGPYFEERLASLRELPLV-GDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC  412 (466)
T ss_pred             HHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHhccCCCE-EEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH
Confidence            99999999999765 58999999999999999874322211 11245678888887543211    11122456788999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++|+++.+.          .+.+|++|++.+|++|||+++++++++++.+.
T Consensus       413 ~~~Gvl~~~~----------~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~  454 (466)
T PRK07036        413 QERGLLVRPL----------EHLCVLSPPLIITRAQIDEIVAILRAAIEETA  454 (466)
T ss_pred             HHCCcEEeec----------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence            9999998653          25799999999999999999999999987763

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-39  Score=322.36  Aligned_cols=361  Identities=14%  Similarity=0.132  Sum_probs=268.8

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|+||| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+...    ....++...+|.++|++.++
T Consensus        23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~l~~~~~----~~~~~~~~~~la~~l~~~~p   97 (425)
T PRK07495         23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHR-HPRVIAAVKAQLDRFTHTCH----QVVPYENYVRLAERLNALVP   97 (425)
T ss_pred             CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCC-CHHHHHHHHHHHhhccCccc----CccCCHHHHHHHHHHHHhCC
Confidence            7889999999999 499999999875   345664 89999999999998643211    12357788999999999876


Q ss_pred             C---CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCCC-----
Q psy15447        140 L---EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHNN-----  195 (457)
Q Consensus       140 ~---~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~d-----  195 (457)
                      .   ++++|++||++|++.|++..   .++..+|.....+|+.+..++.+++.             .+..++.++     
T Consensus        98 ~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  177 (425)
T PRK07495         98 GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGV  177 (425)
T ss_pred             CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccc
Confidence            3   57899999999999999854   45667888899999998877665442             122333332     


Q ss_pred             -----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447        196 -----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       196 -----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~  266 (457)
                           .+++++.+++..      .++++++|++||+++++|.+.+    +++|+++|++||+++|+||+++ | +|++|.
T Consensus       178 ~~~~~~~~l~~~~~~~~------~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~  249 (425)
T PRK07495        178 SVEQSLAALDKLFKADV------DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-G-FARTGK  249 (425)
T ss_pred             cHHHHHHHHHHHHHhcc------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-c-CCcCCC
Confidence                 344566554211      1256899999999999886643    8899999999999999999986 2 456665


Q ss_pred             c-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447        267 G-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLT  343 (457)
Q Consensus       267 ~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~  343 (457)
                      + ..+++++.|   ||+  ||||++|+  +.|++++++++++.+....+.  ++.+.+|+.|++++++++++++. ++.+
T Consensus       250 ~~a~~~~gv~p---Di~--tlsK~l~~G~pigav~~~~~i~~~~~~~~~~--~T~~~~pl~~aaa~a~l~~l~~~-~l~~  321 (425)
T PRK07495        250 LFAMEHHEVAA---DLT--TMAKGLAGGFPLAAVTGRAEIMDAPGPGGLG--GTYGGNPLGIAAAHAVLDVIEEE-DLCE  321 (425)
T ss_pred             ceeecccCCCC---CEE--eehhhhcCCccceEEEEcHHHHhccCCCCcC--CCCCCCHHHHHHHHHHHHHHHhc-hHHH
Confidence            4 356788877   665  89999963  468899999998877543333  34456999999999999999765 5889


Q ss_pred             HHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447        344 KLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP  422 (457)
Q Consensus       344 ~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~  422 (457)
                      ++++++++|++.|+++.. .+.+. .....+.++++.+.++...+........+.+.|+++|+++...+       ..++
T Consensus       322 ~~~~~g~~l~~~L~~l~~~~~~i~-~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-------~~~~  393 (425)
T PRK07495        322 RANQLGNRLKQRLASLRETVPEIA-DIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG-------VHGN  393 (425)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCee-eeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC-------CCCC
Confidence            999999999999987432 12221 11345888888886432111112245678899999999986532       1248


Q ss_pred             eEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        423 SIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       423 ~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .+||.||+.+|++|+|+++++|+++++++..
T Consensus       394 ~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~  424 (425)
T PRK07495        394 VIRFLAPITIQDDVFAEALDILEASILEASA  424 (425)
T ss_pred             EEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999987653

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=100.00  E-value=1.7e-39  Score=323.72  Aligned_cols=359  Identities=14%  Similarity=0.167  Sum_probs=266.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++   ..+|+. ||+|.+|+.+|+.+.++.+..    ...++...+|+++|++.+
T Consensus        21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~~----~~~~~~~~~lae~l~~~~   95 (425)
T PRK09264         21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHN-NPVLKQALIDYLQRDGITHGL----DMHTTAKREFLETFEETI   95 (425)
T ss_pred             CCccEEeeecCEEEeCCCCEeeecccchhhccCCCC-CHHHHHHHHHHHHhccccccc----ccCcHHHHHHHHHHHHhh
Confidence            47889999999999 599999999775   345664 899999999999986543221    124678889999999864


Q ss_pred             C----CC-cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecC----
Q psy15447        139 G----LE-ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKH----  193 (457)
Q Consensus       139 g----~~-~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~----  193 (457)
                      .    .+ +++|+ +||++|++.|++..   .++.++|.....+|+.+..++.+++.            .+..+++    
T Consensus        96 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~  175 (425)
T PRK09264         96 LKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYF  175 (425)
T ss_pred             cCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcc
Confidence            2    33 45565 79999999999864   46667888899999998887776531            2333444    


Q ss_pred             ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                          +|++++++.+++...     +++.+++|++||+++++|.+.|    |++|+++|++||++||+||+|+.  +|++|
T Consensus       176 ~~~~~~~~~l~~~l~~~~~-----~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG--~GrtG  248 (425)
T PRK09264        176 GGDVDTLAYLEKLLEDSSS-----GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG--CGRTG  248 (425)
T ss_pred             ccchhHHHHHHHHHHhccC-----CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC--Ccccc
Confidence                467888888865321     1246889999999999887653    89999999999999999999862  56666


Q ss_pred             Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447        266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL  341 (457)
Q Consensus       266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~  341 (457)
                      .++ .+++++.|   ||+  |++|++|+.|   |++++++++ ..+....+..+|  +.+|++|++++++++.+.+.+++
T Consensus       249 ~~~~~~~~~v~P---Di~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~--~gnp~~~aaa~a~l~~~~~~~~l  320 (425)
T PRK09264        249 TFFSFERAGITP---DIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEEYWSDDAF  320 (425)
T ss_pred             HHHHHhhcCCCC---CEE--EeccccCCCccceEEEEEchhh-hccCCCccCCCC--CCCHHHHHHHHHHHHHHHhhhHH
Confidence            653 47788887   665  8899997534   888888876 333322223333  45899999999999433344468


Q ss_pred             HHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447        342 LTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ  420 (457)
Q Consensus       342 ~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~  420 (457)
                      .++++++.+++++.|+++.. .+.+....+..+.++++.+.+..       ....+++.|.++||++.+...       .
T Consensus       321 ~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-------~~~~l~~~~~~~Gv~~~~~~~-------~  386 (425)
T PRK09264        321 EKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-------LAGKIAAEAFENGLIIETSGP-------E  386 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH-------HHHHHHHHHHHCCCEEeccCC-------C
Confidence            89999999999998876431 12221112345788888886543       567899999999999976432       2


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447        421 KPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL  455 (457)
Q Consensus       421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~  455 (457)
                      .+++|++|++.+|++|+++++++|+++++++.+.+
T Consensus       387 ~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~~  421 (425)
T PRK09264        387 DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAEE  421 (425)
T ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            47999999999999999999999999998876543

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=3.3e-39  Score=318.77  Aligned_cols=351  Identities=17%  Similarity=0.158  Sum_probs=267.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.||| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+.+  . .  ..++...+|.++|++..
T Consensus        22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~--~-~--~~~~~~~~la~~L~~~~   95 (408)
T PRK04612         22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHN-DPDLVAALTEQAGKLWHTS--N-V--FYSAPPLKLAEELVTAS   95 (408)
T ss_pred             CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCC-CHHHHHHHHHHHHhccccc--c-c--cCCHHHHHHHHHHHhhC
Confidence            46789999999999 599999999765   345554 8999999999999854321  1 1  14677889999999987


Q ss_pred             C-CCcEEEecccHHHHHHHHHhhc------C----CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447        139 G-LEETALYSFGFSTSASAIAAYV------K----RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN  195 (457)
Q Consensus       139 g-~~~~i~~~sG~~a~~~ai~a~~------~----~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d  195 (457)
                      + .++++|++||++|++.|++...      +    +.++|.....+|+.+..++..++.            .+..++++|
T Consensus        96 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d  175 (408)
T PRK04612         96 RFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND  175 (408)
T ss_pred             CCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC
Confidence            5 4678999999999999998643      1    224677788899998887766542            234567789


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~  270 (457)
                      ++.+++.++.          +++++|++||+++.+|.+.|    +++|+++|++||++||+||+|+.  +|++|..+. .
T Consensus       176 ~~~l~~~~~~----------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg--~gr~G~~~a~~  243 (408)
T PRK04612        176 VEALEAAMAG----------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCG--MGRTGTLFAHW  243 (408)
T ss_pred             HHHHHHhhCC----------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCCchhhhh
Confidence            9999988742          46789999999987777764    89999999999999999999862  455565432 3


Q ss_pred             ccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK  348 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~  348 (457)
                      ++++.|   |++  |++|++|+  +.|++++++++++.+....+..+|+  .+|+.|+++.++|+.+++. ++.++++++
T Consensus       244 ~~~~~p---di~--t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~--~~p~~~aaa~a~L~~~~~~-~l~~~~~~~  315 (408)
T PRK04612        244 QEQVTP---DIV--TLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG--GNPLAAAVARVALRKLASP-QIAANVARQ  315 (408)
T ss_pred             hcCCCC---CEE--EEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC--CCHHHHHHHHHHHHHHHhc-cHHHHHHHH
Confidence            455555   555  89999963  3477888888888776544444444  5899999999999999764 689999999


Q ss_pred             HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++++++.|+++....++....++.+.++.+.+..+..     ..+..+++.|.++|+++.+.+         .+.+|+.|
T Consensus       316 g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~-----~~a~~i~~~l~~~Gvlv~~~g---------~~~lRl~P  381 (408)
T PRK04612        316 SAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA-----GQAGAILDLAAEHGLLLLQAG---------PDVLRFVP  381 (408)
T ss_pred             HHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh-----hHHHHHHHHHHHCCeEEeeCC---------CCEEEEcC
Confidence            9999999987542222221224567888888753210     145678899999999986532         47999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++.+|++|+++++++++++++++..
T Consensus       382 pl~it~eeid~~l~~l~~~l~~~~~  406 (408)
T PRK04612        382 ALNLTDAELADGLARLRLALADYVA  406 (408)
T ss_pred             CccCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999987643

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=100.00  E-value=3.4e-39  Score=321.31  Aligned_cols=343  Identities=16%  Similarity=0.172  Sum_probs=263.8

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|..+.+++|.|+|+ ||++||||.++   ..+|+ +||+|.+++.++++++++.+.   .+  .++...+|+++|++++
T Consensus        23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh-~~~~i~~a~~~~~~~~~~~~~---~~--~~~~~~~l~~~l~~~~   96 (401)
T PRK00854         23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGH-CHPKILAAMVEQAGRLTLTSR---AF--RNDQLAPLYEELAALT   96 (401)
T ss_pred             CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccccc---cc--CCHHHHHHHHHHHhhC
Confidence            367889999999994 99999998774   22333 489999999999999765432   11  3578899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d  195 (457)
                      |.+.+++++||++|++.|++++.           ++.++|..+..+|+++...+.+++            ..+..++++|
T Consensus        97 ~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  176 (401)
T PRK00854         97 GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGD  176 (401)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCC
Confidence            99999999999999999998874           234677888889998766554322            2456788899


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-c
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-E  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~  270 (457)
                      ++++++.+.           +++++|++|+++|++|.+.|    +++|+++|++||++||+||+|+ | +|++|.++. +
T Consensus       177 ~~~le~~i~-----------~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g-~g~~g~~~~~~  243 (401)
T PRK00854        177 AEALEAAIT-----------PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-G-LGRTGKLLAEE  243 (401)
T ss_pred             HHHHHHHhC-----------CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCCCchHhHHh
Confidence            999998874           25689999999999999987    9999999999999999999997 3 455554432 4


Q ss_pred             ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      ++++.|   |++  +++|+++.   ++|++++++++++.++......+++  .+|+.+++++++|+.+++. ++.+++++
T Consensus       244 ~~g~~~---D~~--~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aa~~a~L~~l~~~-~~~~~~~~  315 (401)
T PRK00854        244 HEGIEA---DVT--LIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFG--GNPLACAVARAALKVLTEE-GMIENAAE  315 (401)
T ss_pred             hcCCCC---CEE--EecccccCCccCeEEEEEcHHHHhcccCCCCCCCCC--cCHHHHHHHHHHHHHHHHc-CHHHHHHH
Confidence            567665   666  46899952   3578999999988876443333443  4999999999999988754 47899999


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +++++.+.|+++.. ..+.. ..+.+.++.+.+..+.      ....++++.|.++||++.+..         .+++|++
T Consensus       316 ~~~~l~~~L~~~~~-~~~~~-~~g~g~~~~i~~~~~~------~~~~~~~~~L~~~GV~v~~~~---------~~~lR~~  378 (401)
T PRK00854        316 MGAYFLEGLRSIRS-NIVRE-VRGRGLMLAVELEPEA------GGARQYCEALKERGLLAKDTH---------DHTIRLA  378 (401)
T ss_pred             HHHHHHHHHHhhcc-CceEE-EeccceEEEEEEecCc------hhHHHHHHHHHHCCeEEecCC---------CCEEEEe
Confidence            99999999988321 11111 1345666766554321      045679999999999986432         4799999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      |++.+|++||++++++|++++.
T Consensus       379 p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        379 PPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             CCcccCHHHHHHHHHHHHHHhh
Confidence            9999999999999999998763

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-39  Score=324.18  Aligned_cols=362  Identities=17%  Similarity=0.181  Sum_probs=263.2

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+++|+.+......  .  ...++...+|+++|++.+
T Consensus        45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~ql~~~~~~~~--~--~~~~~~~~~la~~L~~~~  119 (464)
T PRK06938         45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHT--L--DLTTPVKDQFVQDLFASL  119 (464)
T ss_pred             CCceEEeccccEEEeCCCCEEEEccCCccccccCC-CCHHHHHHHHHHHHhhhcccc--c--ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999765   33455 489999999999975221111  1  125788889999999977


Q ss_pred             CC-----CcEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEec--CC-
Q psy15447        139 GL-----EETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFK--HN-  194 (457)
Q Consensus       139 g~-----~~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~--~~-  194 (457)
                      +.     ++++|+ +||++|++.|++..   .++..+|.....+|+.+..++.+++.            .+..++  ++ 
T Consensus       120 p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~  199 (464)
T PRK06938        120 PEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDY  199 (464)
T ss_pred             cccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccc
Confidence            53     246666 69999999999864   46667888899999998887776542            122222  21 


Q ss_pred             --------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447        195 --------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV  256 (457)
Q Consensus       195 --------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~  256 (457)
                                    +.+.+++.+++...     +.+.+++||+||+++.+|.+.|    +++++++|++||++||+||++
T Consensus       200 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~-----~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~  274 (464)
T PRK06938        200 RCPFGLGGEAGVRANLHYLENLLDDPES-----GVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ  274 (464)
T ss_pred             cccccCchhhHHHHHHHHHHHHHHhhcc-----CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence                          14566777754210     1146899999999999898766    899999999999999999997


Q ss_pred             c-cccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        257 S-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       257 ~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      + +|+   +|.+ ..+++|+.|   ||+  +++|++|+  +-|++++++++ +.+....++.+|  +.+|++|++++++|
T Consensus       275 tGfGR---tG~~~a~e~~gv~P---Div--~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~--~gnpla~Aaa~a~L  343 (464)
T PRK06938        275 SGFGR---TGKMFAFEHAGIIP---DVV--VLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTF--RGNQMAMAAGSATL  343 (464)
T ss_pred             cCCCc---CcHHHHHHhcCCCC---CEE--EeeccccCCCceEEEeehhHh-hccCCCCCCCCC--CcCHHHHHHHHHHH
Confidence            5 544   4544 458899988   787  79999963  33667777774 544322333333  45999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCe
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGF  405 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi  405 (457)
                      ++++++ ++.+++++++++|++.|+++....++....+..+.++.+.+..+...       .........+.+.|+++|+
T Consensus       344 ~~l~~~-~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl  422 (464)
T PRK06938        344 RYIKEH-RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGL  422 (464)
T ss_pred             HHHHHh-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCe
Confidence            999765 58899999999999999875321222222245688888888543210       0011245678899999999


Q ss_pred             eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++.+..       ...+.+||.|++.+|++|+++++++++++++++..
T Consensus       423 l~~~~g-------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~  463 (464)
T PRK06938        423 ILELGG-------RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA  463 (464)
T ss_pred             EEeecC-------CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence            986532       12478999999999999999999999999987643

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=6.5e-39  Score=319.74  Aligned_cols=360  Identities=18%  Similarity=0.159  Sum_probs=269.5

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++   ..+|++ ||+|.+|+.+|+.+..+.+.    .+..++...+|+++|++.+
T Consensus        23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~----~~~~~~~~~~la~~L~~~~   97 (443)
T PRK08360         23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHN-NPRVVKAIKEQTDKLIHYTP----IYGFPVEPLLLAEKLIEIA   97 (443)
T ss_pred             CCceEEecceeEEEECCCCEEEEccccHhhcccCCC-CHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence            37889999999999 599999999775   345654 89999999999998644322    1235788899999999987


Q ss_pred             CC--CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCC------
Q psy15447        139 GL--EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNN------  195 (457)
Q Consensus       139 g~--~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d------  195 (457)
                      +.  ++++|++||++|++.|++..   +++..++.....+|+.+..++.+++..            +..+++++      
T Consensus        98 p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (443)
T PRK08360         98 PGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPF  177 (443)
T ss_pred             CCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccc
Confidence            64  57889999999999999854   566777888889999887776655521            22222222      


Q ss_pred             -----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccccc
Q psy15447        196 -----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       196 -----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                                 .+.+++.++...      .++++++|++||+++++|.+.|    +++|+++|++||++||+||+|+.  
T Consensus       178 ~~~~~~~~~~~~~~~~~~l~~~~------~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g--  249 (443)
T PRK08360        178 GKEPGSCKMECVEYIKEKFEGEV------YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSG--  249 (443)
T ss_pred             cCchhhhHHHHHHHHHHHHHhcc------CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--
Confidence                       234455554311      1257899999999999998876    88999999999999999999863  


Q ss_pred             ccCCCCcc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447        261 LGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA  337 (457)
Q Consensus       261 ~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~  337 (457)
                      +|++|.++ .+++++.|   |++  |+||++|.  +.|++++++++++.+....  +.++.+.+|+.+++++++|+.+++
T Consensus       250 ~gr~G~~~a~~~~~~~p---Dii--tlsK~l~~G~pigav~~~~~i~~~~~~~~--~~~T~~~~p~~~aaa~a~l~~l~~  322 (443)
T PRK08360        250 LGRTGKWFAIEHFGVEP---DII--TLGKPLGGGLPISATIGRAEIMDSLPPLA--HAFTLSGNPVASAAALAVIEEIEE  322 (443)
T ss_pred             CCcCccchhhhhcCCCC---CEE--EecccccCCceeEEEEEcHHHHhhhcCCC--CCCCCCcCHHHHHHHHHHHHHHHH
Confidence            45556543 46678877   666  79999973  3588999999998886433  344555699999999999999976


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQE  416 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~  416 (457)
                      . ++.++++++++++++.|+++....++....+..+.++.+.+.++... ......+..+.+.|+++|+++.+..     
T Consensus       323 ~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----  396 (443)
T PRK08360        323 K-NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS-----  396 (443)
T ss_pred             c-CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC-----
Confidence            5 48899999999999999874311122112245678888877543211 1112245678899999999986532     


Q ss_pred             cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                          .+.+|++|++.+|++|+++++++++++++.+.
T Consensus       397 ----~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~  428 (443)
T PRK08360        397 ----GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE  428 (443)
T ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                47899999999999999999999999998764

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=100.00  E-value=2.9e-39  Score=320.53  Aligned_cols=353  Identities=15%  Similarity=0.191  Sum_probs=262.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .||++||||.++   ..+|++ ||+|.+|+.+|+.+.+..+.    ....++...+|.++|++..
T Consensus        17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~lae~l~~~~   91 (412)
T TIGR02407        17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHN-NPKLKQALIDYLADDGIIHS----LDMATEAKREFLETFNEII   91 (412)
T ss_pred             CCceEEecccCEEEeCCCCEEEEcccchhhccCCCC-CHHHHHHHHHHHhhccceec----cccCcHHHHHHHHHHHHhc
Confidence            47889999999999 599999999775   334554 89999999999987554322    1124688899999999974


Q ss_pred             --C--CC-cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecC----
Q psy15447        139 --G--LE-ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKH----  193 (457)
Q Consensus       139 --g--~~-~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~----  193 (457)
                        +  .. +++|+ +||++|++.|++..   .++..+|.....+|+.+..++.+++.            .+..+|.    
T Consensus        92 ~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~  171 (412)
T TIGR02407        92 LKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL  171 (412)
T ss_pred             cCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcc
Confidence              2  22 45565 89999999999865   35666788899999999888776542            2233343    


Q ss_pred             ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                          ++++.+++.+++...     +.+.+++|++||+++++|.+.|    +++|+++|++||++||+||+++ | +|++|
T Consensus       172 ~~~~~~~~~l~~~~~~~~~-----~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G-~GRtG  244 (412)
T TIGR02407       172 GGDVDTIAYFEKLLEDSSS-----GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-G-CGRTG  244 (412)
T ss_pred             ccchhHHHHHHHHHHhccC-----CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCccc
Confidence                346778888864321     1246789999999999998654    8999999999999999999986 2 45556


Q ss_pred             Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcH
Q psy15447        266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPS  340 (457)
Q Consensus       266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~  340 (457)
                      .++ .+++++.|   ||+  +++|++|+.|   |++++++++ +.+....+..+|  +.+|+.|+++.++++. ++ +++
T Consensus       245 ~~~a~~~~~v~P---Di~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~--~gnpl~~aaa~a~l~~~i~-~~~  315 (412)
T TIGR02407       245 TFFSFEPAGIEP---DIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTF--RGNNLAFVTATAALEYYWS-DDA  315 (412)
T ss_pred             hhHHhcccCCCC---CEE--EechhccCCccceeEEEEchhh-hccCCCccCCCC--CccHHHHHHHHHHHHHHhc-ccH
Confidence            553 47788887   666  7999997523   788888775 444322233333  4599999999999996 54 456


Q ss_pred             HHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447        341 LLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK  419 (457)
Q Consensus       341 ~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~  419 (457)
                      +.++++++++++++.|+++.. .+++....+..+.++++.+.+..       ....+.+.|+++||++.+..       .
T Consensus       316 l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-------~~~~~~~~~~~~Gv~v~~~~-------~  381 (412)
T TIGR02407       316 FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD-------LAGKIAKAAFENGLIIETSG-------P  381 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH-------HHHHHHHHHHHCCCEEeccC-------C
Confidence            889999999999998876332 22222333456888899987653       56689999999999997643       1


Q ss_pred             CCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        420 QKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..+.+||+|++.+|++|++++++++++++++
T Consensus       382 ~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~  412 (412)
T TIGR02407       382 NDEVIKLLPPLTIDEETLQQGLDILEQAVEE  412 (412)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence            2478999999999999999999999998753

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=5.5e-39  Score=320.42  Aligned_cols=382  Identities=18%  Similarity=0.238  Sum_probs=287.0

Q ss_pred             ChhhHHHHHcccCCCCCCCcccccccc-CCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDV-SSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~  109 (457)
                      +++++-|...+..|.+...|....... ..|.++++++|.++| .||++||||.++   .++|+ +||+|.+++.+++++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh-~~p~i~~a~~~~~~~   81 (426)
T PRK00062          3 KSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGH-AHPEVVEAVIEAAEK   81 (426)
T ss_pred             hhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCC-CCHHHHHHHHHHHHh
Confidence            466888888999988886655433222 346789999999999 599999999886   45677 599999999999988


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                       +..      .+..++...+|+++|++.+ +.+++++++||++|++.|++..   .++.++|..+..+|+.+......++
T Consensus        82 -~~~------~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~  154 (426)
T PRK00062         82 -GLS------FGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAG  154 (426)
T ss_pred             -CCc------CCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccC
Confidence             332      1235677889999999876 4678899999999999999874   4566778888889997644333311


Q ss_pred             -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                         .....++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--------~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l  226 (426)
T PRK00062        155 SGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYG--------DEIAAVIVEPVAGNMGVVPPKPGFLEGLREL  226 (426)
T ss_pred             ccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCC--------CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHH
Confidence                               1245678899999999886532        46789999999999999988    9999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceec-CC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFS-AS  319 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~-~~  319 (457)
                      |++||+++|+||+|+..++|.  .+..+++++.|   |++  +++|++|.  +.|++++++++++.+......+.++ .+
T Consensus       227 ~~~~~~llI~DEv~~G~r~g~--~~~~~~~~~~p---Di~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~  299 (426)
T PRK00062        227 CDEHGALLIFDEVMTGFRVAL--GGAQGYYGVTP---DLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLS  299 (426)
T ss_pred             HHHcCCEEEEeechhccccCC--ccHHHHhCCCc---chH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCc
Confidence            999999999999997434442  45567788877   554  89999963  3578899999999886433333333 35


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL  393 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~  393 (457)
                      .+|+.|++++++|+.+++. ++.++++++.+++++.|+++....++....++.+.++.+.+..+...      ..+...+
T Consensus       300 ~~p~~~aaa~a~L~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~  378 (426)
T PRK00062        300 GNPLAMAAGLATLKLLKEP-GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERF  378 (426)
T ss_pred             CCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHH
Confidence            7999999999999998765 58899999999999988763211243332245688888877643110      0111245


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+.+.|+++||++.+..+         +.+++  ++.+|++|+++++++++++++.+
T Consensus       379 ~~i~~~l~~~Gv~v~~~~~---------~~~~~--~~~~t~~ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        379 ARFFHAMLDEGVYLAPSQF---------EAGFV--SAAHTDEDIEKTLEAARKAFAAL  425 (426)
T ss_pred             HHHHHHHHHCCeEeecCCc---------Cceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence            6799999999999877543         34555  47899999999999999998754

>PLN00144 acetylornithine transaminase

Probab=100.00  E-value=2.6e-39  Score=317.92  Aligned_cols=340  Identities=17%  Similarity=0.191  Sum_probs=263.7

Q ss_pred             eecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447         67 VDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE  142 (457)
Q Consensus        67 i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  142 (457)
                      +++++|+|+| .||++||||.++   ..+|+. ||+|.+|+.+|+.+..+...     ...++...+|+++|++..+.++
T Consensus         1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~   74 (382)
T PLN00144          1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHG-DPDWVKAVAEQAGTLAHVSN-----VYHTIPQVELAKRLVASSFADR   74 (382)
T ss_pred             CeeeeccEEEeCCCCEEEECCcCHHhccCCCC-CHHHHHHHHHHHHhcCCccc-----cccCHHHHHHHHHHHhcCCCCe
Confidence            4689999999 599999999875   245664 89999999999998543211     1236788999999999888888


Q ss_pred             EEEecccHHHHHHHHHhhc---C-------------CCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCC
Q psy15447        143 TALYSFGFSTSASAIAAYV---K-------------RNDAVFVDENINFAIQTGLIASRC------------KVQYFKHN  194 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~---~-------------~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~  194 (457)
                      +++++||++|++.|++...   +             +.++|.....+|+.+...+.+++.            .+..++++
T Consensus        75 v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  154 (382)
T PLN00144         75 VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG  154 (382)
T ss_pred             EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC
Confidence            9999999999999998642   2             245778888999998887776542            23567788


Q ss_pred             CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-c
Q psy15447        195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-T  269 (457)
Q Consensus       195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~  269 (457)
                      |++++++.++.          .++++|++||+++++|.+.+    +++|+++|++||+++|+||+++.  +|++|.++ .
T Consensus       155 d~~~l~~~~~~----------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg--~gr~g~~~~~  222 (382)
T PLN00144        155 NLEAARKLIQK----------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCG--LGRTGYLWAH  222 (382)
T ss_pred             CHHHHHHhcCC----------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchHhhh
Confidence            99999988742          46789999999999666543    78999999999999999999863  45555443 3


Q ss_pred             cccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        270 EYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       270 ~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      +++++.|   ||+  ||||+++  .+.|++++++++++.+....+..+|  +.+|+.|+++.++|+++++ +++.+++++
T Consensus       223 ~~~~~~P---Di~--t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~i~~-~~~~~~~~~  294 (382)
T PLN00144        223 EAYGVEP---DIM--TLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTF--AGGPLVCNAALAVLDKISK-PGFLASVAK  294 (382)
T ss_pred             hhcCCCC---CEE--EecccccCCcceEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhh-chHHHHHHH
Confidence            5788887   554  8999995  4568999999999887644433334  4699999999999999975 458889999


Q ss_pred             HHHHHHHHhhccc-ccCCe-EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEE
Q psy15447        348 KCNTMHSLLSQHK-VTQRF-LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIR  425 (457)
Q Consensus       348 ~~~~l~~~L~~~~-~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lR  425 (457)
                      +++++++.|+++. ..+.+ .+  ...+.++++.+..         ....+++.++++||++.+...        .+.+|
T Consensus       295 ~g~~l~~~l~~~~~~~~~~~~v--rg~G~~~~l~l~~---------~~~~~~~~~~~~Gv~i~~~~~--------~~~lr  355 (382)
T PLN00144        295 KGEYLRELLRRKLGGNPHVKEV--RGVGLLVGIQLDV---------PAGPLVDACRDSGLLVLTAGK--------GDVVR  355 (382)
T ss_pred             HHHHHHHHHHHHHhhCCCceee--ecCceEEEEEecC---------ccHHHHHHHHHCCeEEeecCC--------CCEEE
Confidence            9999888776531 12222 22  2478889998832         235788999999999976531        37999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        426 ITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       426 i~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++|+..+|++|+++++++|++++..+
T Consensus       356 l~p~~~~~~~~i~~~~~~l~~~l~~~  381 (382)
T PLN00144        356 LVPPLVISEAELEQAVEILADCLPAL  381 (382)
T ss_pred             EeCCCccCHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999998653

>PRK07483 hypothetical protein; Provisional

Probab=100.00  E-value=4.7e-39  Score=320.73  Aligned_cols=369  Identities=15%  Similarity=0.120  Sum_probs=266.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .||++||||.++   ..+|++ ||+|.+++.+|+++..+....    ...++...+|+++|++++
T Consensus        12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~av~~ql~~~~~~~~~----~~~~~~~~~lae~L~~~~   86 (443)
T PRK07483         12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHS-HPRVIAAIHAQIDRLAYAHTS----FFTTEPAEALADRLVAAA   86 (443)
T ss_pred             CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCC-CHHHHHHHHHHHHhccCcccc----ccCCHHHHHHHHHHHHhC
Confidence            47899999999999 599999999874   345554 899999999999985432211    124788899999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCeE------------EEec---
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCKV------------QYFK---  192 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~~---  192 (457)
                      +  .++++|++||++|++.|++...         ++.++|.....||+.+..++.+++...            ..++   
T Consensus        87 p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~  166 (443)
T PRK07483         87 PAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY  166 (443)
T ss_pred             CCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc
Confidence            4  5688999999999999998543         234567778999999888877664211            1111   


Q ss_pred             -CCCH--------------HHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----hHHHHHHHHHcCcEEEE
Q psy15447        193 -HNNM--------------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----LKDILSLRSKYQARIFV  252 (457)
Q Consensus       193 -~~d~--------------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l~~i~~l~~~~g~~li~  252 (457)
                       +++.              +++++.+....       ++.+++|++||+++. +|.+.|    +++|+++|++||++||+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~  239 (443)
T PRK07483        167 AYREQRAGESDEAYGQRLADELEAKILELG-------PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLIL  239 (443)
T ss_pred             cccccccCCCHHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEE
Confidence             2221              45555554321       257899999999974 676665    89999999999999999


Q ss_pred             EcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC--cceecCCCcHHHHH
Q psy15447        253 DESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS--GYCFSASLPPFLAV  326 (457)
Q Consensus       253 DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a  326 (457)
                      ||+++.  +|++|.+ ..+++|+.|   ||+  +++|++|+   +.|++++++++++.+.....  .+..+.+.+|++|+
T Consensus       240 DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~a  312 (443)
T PRK07483        240 DEVMCG--MGRTGTLFACEEDGVAP---DLV--TIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACA  312 (443)
T ss_pred             ecceeC--cccCcHHHHHhhcCCCC---Cee--eehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHH
Confidence            999752  3455554 457899988   787  89999962   45778899999887753211  12223345999999


Q ss_pred             HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHH
Q psy15447        327 AANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQ  402 (457)
Q Consensus       327 aa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~  402 (457)
                      +++++|++++++ .+.+++++++++|++.|+++....++....+..+.++.+.+..+...    .........+.+.+++
T Consensus       313 aa~a~l~~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (443)
T PRK07483        313 AALAVQRVIAED-GLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMA  391 (443)
T ss_pred             HHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHH
Confidence            999999999865 48899999999999999763211222112245688888887543210    0111235678899999


Q ss_pred             cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +|+++.+......  ...++.+||.|++++|++|+|+++++|+++++++..
T Consensus       392 ~Gll~~~~~~~~~--~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~  440 (443)
T PRK07483        392 RGLMVYPMGGTID--GVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA  440 (443)
T ss_pred             CCcEEEecCcccc--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999976431000  011478999999999999999999999999987653

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.3e-38  Score=317.78  Aligned_cols=356  Identities=19%  Similarity=0.201  Sum_probs=263.9

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .||++||||.++   ..+|++ ||+|.+|+.+|+++..+... .   ...++...+|+++|++.+
T Consensus        36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~ql~~~~~~~~-~---~~~~~~~~~lAe~L~~~~  110 (441)
T PRK05769         36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHA-HPKVVKAVKEQAEKFLHYSL-T---DFYYEPAVELAERLVEIA  110 (441)
T ss_pred             CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCC-CHHHHHHHHHHHHhccCccC-c---ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 599999999875   234554 89999999999998543221 1   114678899999999987


Q ss_pred             C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCC-----
Q psy15447        139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHN-----  194 (457)
Q Consensus       139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~-----  194 (457)
                      +   .++++|++||++|++.|++..   +++.++|.....||+.+...+.+++.             .+..++++     
T Consensus       111 p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (441)
T PRK05769        111 PGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN  190 (441)
T ss_pred             CCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccc
Confidence            5   468889999999999999754   56777888899999998887776532             12222221     


Q ss_pred             -----CH--------HHHHH-HHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447        195 -----NM--------QHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV  256 (457)
Q Consensus       195 -----d~--------~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~  256 (457)
                           ++        +.+++ ++++..      .++.+++|++||+++++|.+.|    +++|+++|++||+++|+||++
T Consensus       191 ~~~~~~~~~~~~~~~~~le~~~~~~~~------~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~  264 (441)
T PRK05769        191 PWGIENPEECGNAVLDFIEDYLFKKLV------PPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQ  264 (441)
T ss_pred             cccCCchHHHHHHHHHHHHHHHHhhcc------CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence                 22        22444 222100      1257899999999999999988    999999999999999999998


Q ss_pred             ccccccCCCCcc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447        257 SFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       257 ~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~  333 (457)
                      + | +|++|.++ .+++|+.|   |++  +++|++|.  +.|++++++++++.. ...+..+|  +.+|+.|++++++|+
T Consensus       265 t-G-~gr~G~~~a~~~~gv~p---Div--t~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~--~g~p~~~aaa~a~L~  334 (441)
T PRK05769        265 T-G-MGRTGKMFAIEHFGVEP---DII--TLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTF--GGNPVAAAAALATLE  334 (441)
T ss_pred             h-C-CCcccceehhhccCCCC---CEE--EEcccccCCcccEEEEEehhhhhcC-CCCCCCCC--CcCHHHHHHHHHHHH
Confidence            7 3 56666653 57788877   776  79999963  358889998887543 22334444  359999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447        334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL  413 (457)
Q Consensus       334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~  413 (457)
                      ++++  ++.+++++++++|++.|+++....++.......+.++.+.+.++. .+........+.+.|+++||++.+..  
T Consensus       335 ~l~~--~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~Gil~~~~~--  409 (441)
T PRK05769        335 ELEE--GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR-KEPDPKLRDKVLYEAFKRGLLLLGAG--  409 (441)
T ss_pred             HHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC-ccccHHHHHHHHHHHHhCCcEEecCC--
Confidence            9987  689999999999999998743111221112345778888775431 01111245678899999999986533  


Q ss_pred             ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                             .+.+|++|++.+|++|||++++++++++..+
T Consensus       410 -------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        410 -------KSAIRIIPPLIITEEEADIGLEILEEAIKEL  440 (441)
T ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence                   3789999999999999999999999998754

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=6.2e-39  Score=316.95  Aligned_cols=339  Identities=17%  Similarity=0.205  Sum_probs=265.8

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+.+++++|.++| .||++||||+|+.   ++|+ +||+|.+|+.++++++...   +.  ....+...+|++.+++..
T Consensus        11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~--~~~~~~~~~la~~l~~~~   84 (377)
T PRK02936         11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHV---SN--LFTNSLQEEVASLLAENS   84 (377)
T ss_pred             CCceEEEeecCEEEeCCCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcccc---cc--ccCCHHHHHHHHHHHhcC
Confidence            46789999999999 5999999999875   8887 6999999999999985432   11  134678888999999888


Q ss_pred             CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHHHHHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHLEELL  203 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~le~~l  203 (457)
                      +.+.+++++||++|++.|++..   .+++++|..+..+|+++..++..++.            .+..++++|++++++.+
T Consensus        85 ~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  164 (377)
T PRK02936         85 AGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVM  164 (377)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhc
Confidence            7788999999999999999864   45566788889999998888776653            23567888999999877


Q ss_pred             HhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCC
Q psy15447        204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEE  278 (457)
Q Consensus       204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~  278 (457)
                      .           +++++|++|++++++|...+    +++|+++|++||+++|+||+|+ | +|++|.++ .+++++.|  
T Consensus       165 ~-----------~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g-~g~~g~~~~~~~~~~~~--  229 (377)
T PRK02936        165 N-----------EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT-G-IGRTGTLFAYEQFGLDP--  229 (377)
T ss_pred             c-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhhCCCC--
Confidence            4           24689999999998887754    8999999999999999999985 3 46666553 35667766  


Q ss_pred             ccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Q psy15447        279 VDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       279 ~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L  356 (457)
                       |++  |+||+++.  ++|++++++++++.+.......  +.+.+|+.++++.++++.+... +.+++++++.+++++.|
T Consensus       230 -di~--t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~--t~~~~~~~~aaa~a~l~~~~~~-~~~~~~~~~~~~l~~~L  303 (377)
T PRK02936        230 -DIV--TVAKGLGNGIPVGAMIGKKELGTAFGPGSHGS--TFGGNPLAMAAAKEVLQVIKQP-SFLEEVQEKGEYFLQKL  303 (377)
T ss_pred             -cEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCC--CCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHH
Confidence             555  89999973  4689999999988875433333  3346999999999999988543 47789999999999998


Q ss_pred             hccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        357 SQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       357 ~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      ++.. ..+.+... .+.+.++++.+..+         ...+.+.|.++||++.+..         .+++||+|+..+|++
T Consensus       304 ~~~~~~~~~~~~v-~~~g~~~~i~~~~~---------~~~~~~~l~~~gv~v~~~g---------~~~lRi~p~~~~~~~  364 (377)
T PRK02936        304 QEELEHLECVKNI-RGKGLMIGIECTEE---------VAPVIEQLREEGLLVLSAG---------PNVIRLLPPLVVTKE  364 (377)
T ss_pred             HHHHhhCCcEEeE-eecceEEEEEecch---------HHHHHHHHHHCCeEEecCC---------CCEEEEECCcccCHH
Confidence            7721 12232222 24567888887642         3568889999999987643         478999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        436 DMNSLIETLCKS  447 (457)
Q Consensus       436 di~~~~~~l~~~  447 (457)
                      ++++++++|+++
T Consensus       365 ~i~~~i~~l~~~  376 (377)
T PRK02936        365 ELDQAVYLLKKV  376 (377)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>PRK06149 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=345.34  Aligned_cols=362  Identities=16%  Similarity=0.154  Sum_probs=272.2

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCCccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHNYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-  139 (457)
                      .|+.+++++|.|+| .|||+||||.++ +.+++ +||+|.+|+.+|+.+....   ++.   .++.+.+|+++|+++++ 
T Consensus       567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~-~~~lGh~hp~v~~Ai~~q~~~l~~~---~~~---~~~~~~elae~L~~~~p~  639 (972)
T PRK06149        567 DPPQIERGWRHHLFDMAGRSYLDMVNN-VTVLGHGHPRLAAAAARQWSLLNTN---SRF---HYAAVAEFSERLAALAPD  639 (972)
T ss_pred             CCCeEEEeeeeEEEeCCCCEEEECCCC-ccccCCCCHHHHHHHHHHHHhcccc---ccc---cCHHHHHHHHHHHHhCCC
Confidence            47789999999999 599999999865 44455 5999999999999885432   222   46788999999999884 


Q ss_pred             -CCcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEE----------ec
Q psy15447        140 -LEETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRCK-------------VQY----------FK  192 (457)
Q Consensus       140 -~~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~----------~~  192 (457)
                       .+.++|++||++|++.|++   +++++.++|..+..+|+.+..+..+++..             +..          ++
T Consensus       640 ~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~  719 (972)
T PRK06149        640 GLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFR  719 (972)
T ss_pred             CcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCC
Confidence             6789999999999999998   56788889999999999887665543210             111          11


Q ss_pred             CCC-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-cccccc
Q psy15447        193 HNN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFGTLG  262 (457)
Q Consensus       193 ~~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g~~g  262 (457)
                      +++     .+++++.++....     .++++++||+||+++++|.+.|    +++|+++|++||+++|+||++ ++|++|
T Consensus       720 ~~~~~~~~~~~~~~~l~~~~~-----~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG  794 (972)
T PRK06149        720 GADSAADYVRDVVAQLEELDA-----SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLG  794 (972)
T ss_pred             CcccHHHHHHHHHHHHHHHhh-----cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccC
Confidence            222     2445555543211     1257899999999999999888    999999999999999999998 676665


Q ss_pred             CCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcH
Q psy15447        263 STGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPS  340 (457)
Q Consensus       263 ~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~  340 (457)
                      ..+. ..+++|+.|   ||+  |++|++|.  +.|++++++++++.+.... .+..+.+.+|++|++++++|++++++ .
T Consensus       795 ~~~~-a~e~~gv~P---Div--t~gK~lg~G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gnP~~~aaala~L~~i~~e-~  866 (972)
T PRK06149        795 HYFW-GFEQQGVVP---DII--TMAKGMGNGHPLGAVITRREIAEALEAEG-YFFSSTGGSPVSCRIGMAVLDVLREE-K  866 (972)
T ss_pred             ccch-hhhhcCCCC---CEE--EecccccCCeeeEEEEEcHHHHhhhccCC-cccCCCCCCHHHHHHHHHHHHHHHhc-C
Confidence            4222 457889987   787  89999963  4588999999998876422 12223457999999999999999765 4


Q ss_pred             HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447        341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKK  419 (457)
Q Consensus       341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~  419 (457)
                      +.+++++++++|++.|+++....++.......+.++.+.+..+... +........+++.|+++||++.+.+       .
T Consensus       867 l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g-------~  939 (972)
T PRK06149        867 LQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG-------D  939 (972)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecC-------C
Confidence            8899999999999999875321222212245688888887532111 1122246789999999999997643       1


Q ss_pred             CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        420 QKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+++||.|++++|++|+|++++++++++++.
T Consensus       940 ~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~~  971 (972)
T PRK06149        940 HLNILKIKPPLCLDRESADFFVDMLDRVLTEG  971 (972)
T ss_pred             CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence            24789999999999999999999999998753

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-38  Score=317.94  Aligned_cols=367  Identities=14%  Similarity=0.131  Sum_probs=261.8

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+.+|+.+.-...  +.  ..+++...+|+++|++.+
T Consensus        40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~~~~~~~--~~--~~~~~~~~~lAe~L~~~~  114 (459)
T PRK06931         40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGH-NHPDVLQSIQDVLTSGLPLH--TL--DLTTPLKDAFSEYLLSLL  114 (459)
T ss_pred             CCceEEeccccEEEeCCCCEEEEcccchhhccCCC-CCHHHHHHHHHHHhhhcccc--cc--ccCCHHHHHHHHHHHHhC
Confidence            47889999999999 499999999875   33455 48999999999998621111  11  125788899999999987


Q ss_pred             CCC----cEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC---
Q psy15447        139 GLE----ETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN---  195 (457)
Q Consensus       139 g~~----~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d---  195 (457)
                      +..    ..+|+ +||++|++.|++..   +++..+|.....||+.+..++.+++.            .+..++.++   
T Consensus       115 p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (459)
T PRK06931        115 PGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYR  194 (459)
T ss_pred             CCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccc
Confidence            522    34455 89999999999854   56777888899999999888766542            122233222   


Q ss_pred             ----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-ccc
Q psy15447        196 ----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGT  260 (457)
Q Consensus       196 ----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~  260 (457)
                                .+.+++.+++..+.... ..+++++||+||+++.+|.+.|    +++++++|++||++||+||+++ +|+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR  273 (459)
T PRK06931        195 CPLGIGGEAGVKALTYYFENFIEDVES-GVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR  273 (459)
T ss_pred             ccccCCchhHHHHHHHHHHHHHHhhhc-CCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc
Confidence                      23343333322111001 1256899999999999888765    8999999999999999999975 555


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN  338 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~  338 (457)
                      +|.  .+..+++|+.|   ||+  +++|++|+  +-|++++++++ +.+....+..+|  +.+|++|++++++|+++++.
T Consensus       274 tG~--~~a~~~~gv~P---Div--t~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~--~gnpla~aaala~L~~l~~~  343 (459)
T PRK06931        274 TGK--MFAFEHAGIEP---DII--VMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTF--RGNQLAMATGLTTLKILKEE  343 (459)
T ss_pred             Cch--HHHhhhcCCCC---CEE--EecccccCCcceeeeeeHHHH-hhccCCCCCCCC--CCCHHHHHHHHHHHHHHHhC
Confidence            443  23568899988   787  89999963  23567777664 555333333333  46999999999999999765


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFAITCPS  411 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~v~~~~  411 (457)
                       ++.+++++++++|++.|+++....++.......+.++.+.+..+...       ..+......+.+.|+++|+++.+..
T Consensus       344 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~  422 (459)
T PRK06931        344 -NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG  422 (459)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC
Confidence             48899999999999999875321222222245688888887543110       1112245678899999999987542


Q ss_pred             cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                             ...+.+|+.|++.+|++|+|+++++++++++++.+
T Consensus       423 -------~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~  457 (459)
T PRK06931        423 -------RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK  457 (459)
T ss_pred             -------CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence                   12478999999999999999999999999987654

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.4e-38  Score=314.87  Aligned_cols=357  Identities=13%  Similarity=0.164  Sum_probs=264.3

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      |+++++++|.|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+...    ....++...+|+++|+++.+
T Consensus        23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~p   97 (421)
T PRK06777         23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHR-HPKVVAAVRQQLDQFTHTAY----QIVPYASYVTLAERINALAP   97 (421)
T ss_pred             CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCC-CHHHHHHHHHHHhhcccccc----cccCChHHHHHHHHHHHhCC
Confidence            6889999999999 599999999775   345664 89999999999998643211    11256778899999999875


Q ss_pred             ---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecCCC-----
Q psy15447        140 ---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKHNN-----  195 (457)
Q Consensus       140 ---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~~d-----  195 (457)
                         .++++|++||++|++.|++..   +++..+|.....+|+.+..++.+++..             +..+++++     
T Consensus        98 ~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  177 (421)
T PRK06777         98 IDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGV  177 (421)
T ss_pred             CCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCc
Confidence               468899999999999999854   466678888999999998887765521             11122222     


Q ss_pred             -----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447        196 -----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       196 -----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~  266 (457)
                           ++++++.+++..      .++.+++|++||+++++|.. .|   +++|+++|++||++||+||+|+.  +|++|.
T Consensus       178 ~~~~~~~~l~~~~~~~~------~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~g~  249 (421)
T PRK06777        178 SVEEALSSVERLFKADI------APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTG--FARTGK  249 (421)
T ss_pred             CHHHHHHHHHHHHHhcc------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC--CccCCc
Confidence                 556777775311      02568999999999998864 44   89999999999999999999862  455555


Q ss_pred             c-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447        267 G-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLT  343 (457)
Q Consensus       267 ~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~  343 (457)
                      + ..+++++.|   |++  |+||++|+  +.|++++++++++.+....+..+|  +.+|+.|++++++|+.+++ +++.+
T Consensus       250 ~~~~~~~~~~p---Div--~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~~~p~~~aaa~a~L~~~~~-~~l~~  321 (421)
T PRK06777        250 LFAMEYYDVKP---DLI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTY--AGNPLAVAAALAVLDVIAE-EKLCQ  321 (421)
T ss_pred             hhhhhhcCCCC---CEE--eeehhhcCCCceEEEEEcHHHHhccCCCCCCCCC--CcCHHHHHHHHHHHHHHHh-ccHHH
Confidence            4 457788877   666  89999962  348899999998887644333333  4699999999999998876 45889


Q ss_pred             HHHHHHHHHHHHhhccccc-CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447        344 KLREKCNTMHSLLSQHKVT-QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP  422 (457)
Q Consensus       344 ~l~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~  422 (457)
                      +++++++++++.|+++... +.+..+ .+.+.++.+.+..+............+.+.++++||++.+...       ..+
T Consensus       322 ~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~-------~g~  393 (421)
T PRK06777        322 RALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGV-------HGN  393 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCC-------CCC
Confidence            9999999999999874321 222222 4567777776643211111112456677888999999977532       137


Q ss_pred             eEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        423 SIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       423 ~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ++||+|++.+|++++++++++|++++.
T Consensus       394 ~lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        394 VIRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998763

>PRK06917 hypothetical protein; Provisional

Probab=100.00  E-value=8.1e-39  Score=319.40  Aligned_cols=366  Identities=16%  Similarity=0.133  Sum_probs=267.0

Q ss_pred             eeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-
Q psy15447         66 VVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-  140 (457)
Q Consensus        66 ~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-  140 (457)
                      ++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+... +   ...++...+|+++|++.++. 
T Consensus        16 ~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-hp~v~~Ai~~ql~~~~~~~~-~---~~~~~~~~~lae~L~~~~p~~   90 (447)
T PRK06917         16 VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHG-VKEIADAIKEQAEEVSFVYR-S---QFTSEPAEKLAKKLSDLSPGD   90 (447)
T ss_pred             eEEeeeeeEEEeCCCCEEEECchhHHhccCCCC-CHHHHHHHHHHHhhCcCccc-c---ccCCHHHHHHHHHHHHhCCCC
Confidence            68999999999 599999999875   235554 89999999999998543221 1   11468889999999998763 


Q ss_pred             -CcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCeE------------EEe--cC---
Q psy15447        141 -EETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCKV------------QYF--KH---  193 (457)
Q Consensus       141 -~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~~------------~~~--~~---  193 (457)
                       +.++|++||++|++.|++..         .++..+|.....+|+.+...+.+++...            ..+  +.   
T Consensus        91 ~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~  170 (447)
T PRK06917         91 LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYR  170 (447)
T ss_pred             CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccc
Confidence             57888999999999999876         2344577778889999888777665211            111  10   


Q ss_pred             ------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC----hHHHHHHHHHcCcEEEEEcCc
Q psy15447        194 ------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP----LKDILSLRSKYQARIFVDESV  256 (457)
Q Consensus       194 ------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~----l~~i~~l~~~~g~~li~DEa~  256 (457)
                                  ++.+.+++.+++..       ++++++|++||+++. +|.+.|    +++|+++|++||++||+||++
T Consensus       171 ~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~  243 (447)
T PRK06917        171 CPVQKVYPTCQLACATELETAIERIG-------AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVM  243 (447)
T ss_pred             cccCCChHHHHHHHHHHHHHHHHhcC-------CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechh
Confidence                        12345666665432       247899999999985 455554    899999999999999999998


Q ss_pred             ccccccCCCCcc-ccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcc--eecCCCcHHHHHHHHH
Q psy15447        257 SFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGY--CFSASLPPFLAVAANK  330 (457)
Q Consensus       257 ~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~a  330 (457)
                      + | +|++|.++ .+++++.|   ||+  +++|++|.   +.|++++++++++.+......+  ..+.+.+|+.|+++++
T Consensus       244 t-G-fGRtG~~~a~~~~gv~P---Di~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a  316 (447)
T PRK06917        244 T-G-LGRTGAMFAMEHWGVEP---DIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALA  316 (447)
T ss_pred             h-C-cCcccchhhHHhcCCCC---CEE--EeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHH
Confidence            5 3 45666654 57899988   676  89999963   4688889999988875432211  1233469999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHHHcCee
Q psy15447        331 ALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       331 ~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      +|+++++. ++.++++++.++|++.|+++....++.......+.++.+.+..+...    .........+.+.|+++||+
T Consensus       317 ~l~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl  395 (447)
T PRK06917        317 VLEYMEKH-NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLL  395 (447)
T ss_pred             HHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcE
Confidence            99999765 48899999999999999885422232222245678888877532110    11122466789999999999


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +.+...-..  ....+.+|++|++.+|++|||+++++++++++++.+
T Consensus       396 ~~~~~~~~~--g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  440 (447)
T PRK06917        396 LYPAVAGQD--GKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ  440 (447)
T ss_pred             EEecccccC--CCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence            976421000  112479999999999999999999999999987643

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=100.00  E-value=1.6e-38  Score=316.54  Aligned_cols=350  Identities=20%  Similarity=0.220  Sum_probs=269.2

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCCccCC--C-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSF--V-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~--~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++.+++|.|+|+ ||++||||+++ |.+.  + +||+|.+++.++++++++.+   +.+  .++...++++.+++++
T Consensus        13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~-~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~~~~~l~~~~   86 (400)
T PTZ00125         13 LPVVLKRGKGVFVWDVEGKKYYDFLSA-YSAVNQGHCHPKILAALINQAQKLTLTS---RAF--YNDVLGLAEKYITDLF   86 (400)
T ss_pred             CCccEEeeecCEEEeCCCCEEEEcccC-HhhccCCcCCHHHHHHHHHHHHhccccc---ccc--cCHHHHHHHHHHHhCC
Confidence            367889999999995 99999999884 3222  2 48999999999999876532   222  3568899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d  195 (457)
                      +.+.+++++||++|++.+++...           .+.++|..+..+|+.+...+...+.            .+..++++|
T Consensus        87 ~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  166 (400)
T PTZ00125         87 GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYND  166 (400)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCC
Confidence            99999999999999999998764           2345778888999998888776542            234677889


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~  270 (457)
                      ++++++.++.          +++++|++||++|++|.+.|    +++|+++|++||++||+||+|+.  +|++|.++ .+
T Consensus       167 ~~~le~~l~~----------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g--~g~~G~~~~~~  234 (400)
T PTZ00125        167 VEALEKLLQD----------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHD  234 (400)
T ss_pred             HHHHHHHhCC----------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhHHH
Confidence            9999998852          35789999999999999988    99999999999999999999852  45555543 34


Q ss_pred             ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      ++++.|   |++  +++|++++   +.|++++++++++.+.......++  +.+|+.++++.++++.+++. ++.+++++
T Consensus       235 ~~~~~p---d~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~i~~~-~~~~~~~~  306 (400)
T PTZ00125        235 HEGVKP---DIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTY--GGNPLACAVAVEALEVLKEE-KLAENAQR  306 (400)
T ss_pred             hcCCCC---CEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCC--CcCHHHHHHHHHHHHHHHhc-CHHHHHHH
Confidence            567665   666  68899964   347899999998887643333333  35889999999999988754 46788888


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +.+++++.|+++....+......+.+.++++.+..+..     ....++++.|+++||++.+..         .+++||+
T Consensus       307 ~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~-----~~~~~~~~~l~~~Gv~v~~~~---------~~~lRi~  372 (400)
T PTZ00125        307 LGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG-----VNAWDLCLKLKENGLLAKPTH---------DNIIRFA  372 (400)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc-----hHHHHHHHHHHHCCeEEeecC---------CCEEEEE
Confidence            89999888877311122211113457777777764211     145678999999999987643         4789999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        428 CNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++..+|++++++++++|+++++++.
T Consensus       373 ~~~~~~~~~i~~~l~~l~~~l~~~~  397 (400)
T PTZ00125        373 PPLVITKEQLDQALEIIKKVLKSFD  397 (400)
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999988764

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=2.7e-38  Score=314.43  Aligned_cols=348  Identities=15%  Similarity=0.111  Sum_probs=262.7

Q ss_pred             ceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         64 KYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        64 ~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      ++.+++++|+++| .||++||||.++.   ++|++ ||++.+++.+++++++.....    +-+++...++.++|++.++
T Consensus        28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~  102 (427)
T TIGR00508        28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYN-HPRLNAAAQKQIDKMSHVMFG----GFTHKPAIELCQKLVKMTP  102 (427)
T ss_pred             CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCC-CHHHHHHHHHHHHhcCCcccc----ccCCHHHHHHHHHHHhhCC
Confidence            4678999999999 4999999998763   77764 899999999999986543221    1146778999999999875


Q ss_pred             C--CcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEe--c-
Q psy15447        140 L--EETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-------------VQYF--K-  192 (457)
Q Consensus       140 ~--~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~--~-  192 (457)
                      .  +++++++||++|++.|++...         ++.++|.....+|+.+...+.+++..             ....  + 
T Consensus       103 ~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~  182 (427)
T TIGR00508       103 NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ  182 (427)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC
Confidence            3  588999999999999998643         24567888999999877666654421             0011  1 


Q ss_pred             --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447        193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVSFG  259 (457)
Q Consensus       193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g  259 (457)
                              ++|++++++.+++..        +++++|++||+ ++.+|.+.|    +++|+++|++||++||+||+| .|
T Consensus       183 ~~~~~~~~~~~~~~l~~~l~~~~--------~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG  253 (427)
T TIGR00508       183 NRFDEEWNEEAITPLAKLMELHS--------DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TG  253 (427)
T ss_pred             ccccchhHHHHHHHHHHHHHhcC--------CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cC
Confidence                    124567777776432        46789999998 666665443    899999999999999999998 34


Q ss_pred             cccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-c--ceecCCCcHHHHHHHHHHH
Q psy15447        260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-G--YCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~aaa~a~l  332 (457)
                       +|++|.+ ..+++++.|   ||+  +++|++++   +.+.+++++++++.+..... .  +..+...+|+.+++++++|
T Consensus       254 -~Gr~G~~~~~~~~~v~p---Di~--~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l  327 (427)
T TIGR00508       254 -FGRTGKLFACEHAGVVP---DIL--CVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASL  327 (427)
T ss_pred             -CCcCCccchhhhcCCCC---CEE--EechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHH
Confidence             5777776 457889877   777  69999952   24567888899888864321 1  1122235999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH  412 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~  412 (457)
                      +++++.+ +.++++++.++|++.|+++...+.+. ..+..++++.+.+.++.       ....+.+.|+++||++.+.. 
T Consensus       328 ~~l~~~~-~~~~~~~~~~~l~~~L~~l~~~~~i~-~vrg~G~~~~i~~~~~~-------~~~~~~~~l~~~Gv~~~~~~-  397 (427)
T TIGR00508       328 AILLEGE-WQKQVSAIENQLKRELSPLRKNPVVK-DVRVLGAIGVVEMYKPV-------NVEELQKKFVEQGVWIRPFG-  397 (427)
T ss_pred             HHHHhCC-HHHHHHHHHHHHHHHHHHhhcCCCEE-eEeccccEEEEEECCcc-------CHHHHHHHHHHCCeEEEecC-
Confidence            9997764 68999999999999998854222232 12356888888887543       45678999999999986532 


Q ss_pred             CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                               +.+|++|++.+|++|||++++++++++++
T Consensus       398 ---------~~l~~~ppl~~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       398 ---------KLIYVMPPYIITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             ---------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence                     57999999999999999999999998854

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK08297 L-lysine aminotransferase; Provisional

Probab=100.00  E-value=1.4e-38  Score=317.44  Aligned_cols=350  Identities=12%  Similarity=0.102  Sum_probs=254.6

Q ss_pred             eeeecCCCcEEEE--CCeeeEEeecC---CccCCCCChhhHH--HHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         65 YVVDQKSGYIVNI--NGIPCINFATH---NYLSFVENPDIEK--CAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        65 ~~i~~~~g~~~~~--~G~~~id~~s~---~~l~~~~~p~i~~--a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      +.+++++|+|+|+  ||++||||.++   ..+|++ ||+|.+  ++.+|+.+..+....+  ....++...++.++|+++
T Consensus        28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~-~p~v~~~~ai~~ql~~l~~~~~~~--~~~~~~~~~~la~~l~~~  104 (443)
T PRK08297         28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMN-HPALADDPEFRAELGRAALNKPSN--SDVYTVEMARFVDTFARV  104 (443)
T ss_pred             eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCC-ChHHhhHHHHHHHHHHhhhhcccc--CCcCCHHHHHHHHHHHhh
Confidence            3478999999995  89999999775   345654 899999  9999998854211111  112567888999999998


Q ss_pred             c---CCCcEEEecccHHHHHHHHHhhc----------C-----CCCEEEEeCcccHHHHHHHHhcCCeEE----------
Q psy15447        138 M---GLEETALYSFGFSTSASAIAAYV----------K-----RNDAVFVDENINFAIQTGLIASRCKVQ----------  189 (457)
Q Consensus       138 ~---g~~~~i~~~sG~~a~~~ai~a~~----------~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~----------  189 (457)
                      .   +.++++|++||++|++.|++...          +     +.++|.....+|+.+..++.+++....          
T Consensus       105 ~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~  184 (443)
T PRK08297        105 LGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDW  184 (443)
T ss_pred             cCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCc
Confidence            6   24688999999999999998752          1     234777888999999888877652110          


Q ss_pred             --------EecC-------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHH
Q psy15447        190 --------YFKH-------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRS  244 (457)
Q Consensus       190 --------~~~~-------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~  244 (457)
                              .++.             ++++++++.+.+.        ++++++||+||+++++|.+.|    +++|+++|+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~  256 (443)
T PRK08297        185 PRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH--------PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCD  256 (443)
T ss_pred             cccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC--------CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence                    0010             0123344555432        267899999999999998755    899999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHh-h--CCcceecCCC
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRL-S--GSGYCFSASL  320 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~-~--~~~~~~~~~~  320 (457)
                      +||++||+||+++.  +|++|.+ ..+++|+.|   ||+  +++|+++ .||++.+++ +.+.... .  ...+..+.+.
T Consensus       257 ~~g~llI~DEV~tG--fGRtG~~~a~~~~gv~P---Div--~~gK~l~-~~a~l~~~~-i~~~~~~~~~~~~~~~~T~~g  327 (443)
T PRK08297        257 EHDALLIFDEVQTG--VGLTGTAWAYQQLGVRP---DIV--AFGKKTQ-VCGIMAGRR-VDEVEDNVFAVSSRINSTWGG  327 (443)
T ss_pred             HcCCEEEEechhhc--cCccchHHHHHhcCCCC---CEE--Eeccccc-ccceecchH-HHHhhhhhccCccccCCCCCc
Confidence            99999999999852  3555655 457889887   787  7999985 456666654 3222111 0  1112233346


Q ss_pred             cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHH
Q psy15447        321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDM  399 (457)
Q Consensus       321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  399 (457)
                      +|+.|++++++|+++++. ++.++++++++++++.|+++.. .+.+....++.+.++.+.+.+..       ....+++.
T Consensus       328 npl~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~  399 (443)
T PRK08297        328 NLVDMVRARRILEVIEED-GLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA-------DRDEVIRR  399 (443)
T ss_pred             cHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH-------HHHHHHHH
Confidence            999999999999999765 5889999999999999987431 12221112356888888886532       45679999


Q ss_pred             HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |+++||++.+..         .+.+||+|++.+|++|+|+++++|+++++++
T Consensus       400 l~~~Gvl~~~~~---------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        400 LWEEGVLVLPCG---------ERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             HHHCCEEEecCC---------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            999999987543         3689999999999999999999999998764

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=100.00  E-value=2.4e-38  Score=314.87  Aligned_cols=359  Identities=14%  Similarity=0.159  Sum_probs=265.9

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.+|| .|||+||||.++   ..+|++ ||+|.+|+.+|+.++.+...    ....++...+|+++|++..
T Consensus        22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~   96 (421)
T PRK09792         22 CNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHR-HPDLVAAVEQQLQQFTHTAY----QIVPYESYVTLAEKINALA   96 (421)
T ss_pred             CCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCC-CHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHHhC
Confidence            36789999999999 599999999764   345664 89999999999998643211    1125788899999999986


Q ss_pred             C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC------
Q psy15447        139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH------  193 (457)
Q Consensus       139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~------  193 (457)
                      +   .++++|++||++|++.|++..   +++.++|.....+|+.+...+.+++..             +..++.      
T Consensus        97 p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~  176 (421)
T PRK09792         97 PVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHG  176 (421)
T ss_pred             CCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccc
Confidence            5   257899999999999999864   456667888899999988777765421             122222      


Q ss_pred             ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                          ++++.+++.+++...      .+++++|++||+++++|... |   +++|+++|++||++||+||+++.  +|++|
T Consensus       177 ~~~~~~~~~l~~~~~~~~~------~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg--~gr~G  248 (421)
T PRK09792        177 ISTQDSLDAIERLFKSDIE------AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSG--FARTG  248 (421)
T ss_pred             ccHHHHHHHHHHHHHhccC------CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCC
Confidence                234677777764210      25688999999999999765 5   89999999999999999999863  34455


Q ss_pred             Ccc-ccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHH
Q psy15447        266 HGV-TEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL  342 (457)
Q Consensus       266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~  342 (457)
                      .++ .+++++.|   ||+  |++|++|+  +.|++++++++++.+....+..+|  +.+|+.|++++++++++++. ++.
T Consensus       249 ~~~a~~~~~~~p---Di~--t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~gnpl~~aaa~a~l~~l~~~-~~~  320 (421)
T PRK09792        249 KLFAMDHYADKP---DLM--TMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTY--AGNPLAVAAAHAVLNIIDKE-SLC  320 (421)
T ss_pred             chhHHHhcCCCC---cEE--EeehhhcCCCceEEEEEcHHHHhccCCCCcCCCC--CCCHHHHHHHHHHHHHHHhh-hHH
Confidence            443 46777766   664  89999963  458899999998887544333334  46999999999999999765 478


Q ss_pred             HHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCC
Q psy15447        343 TKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKP  422 (457)
Q Consensus       343 ~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~  422 (457)
                      ++++++.+++++.|+++....+........+.++++.+.++............+++.|+++||++.+..       ...+
T Consensus       321 ~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-------~~~~  393 (421)
T PRK09792        321 ERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-------AYGN  393 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-------CCCC
Confidence            889999999999887743212221122344889999886542111111246789999999999985321       1258


Q ss_pred             eEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        423 SIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       423 ~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .+||.|++.+|++|+++++++++++++
T Consensus       394 ~irl~P~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        394 VIRFLYPLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             EEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998874

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=100.00  E-value=4.3e-38  Score=315.11  Aligned_cols=356  Identities=18%  Similarity=0.197  Sum_probs=269.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .|+++.+++|.++| .||++||||+++ ++.+++ +||+|.+++.+++.+....+.    ..+.++.+.+++++|++++|
T Consensus        18 ~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~   93 (413)
T cd00610          18 YPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL----GFFYNEPAVELAELLLALTP   93 (413)
T ss_pred             CCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC----cccCCHHHHHHHHHHHHhCC
Confidence            57889999999999 499999999884 444444 699999999999976432211    11468899999999999998


Q ss_pred             --CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCC--------
Q psy15447        140 --LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHN--------  194 (457)
Q Consensus       140 --~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~--------  194 (457)
                        .+.+++++||++|+..+++++   .++.++|+.+..+|+....++..++.            ++..++++        
T Consensus        94 ~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (413)
T cd00610          94 EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAE  173 (413)
T ss_pred             CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhh
Confidence              778899999999999999876   34445566677889988877776643            35677887        


Q ss_pred             ---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc
Q psy15447        195 ---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG  267 (457)
Q Consensus       195 ---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~  267 (457)
                         |++++++.+++..        +++++++++|+++++|.+.|    +++|+++|++||+++|+||+|+.  +|+.|.+
T Consensus       174 ~~~d~~~l~~~l~~~~--------~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g--~g~~g~~  243 (413)
T cd00610         174 LADDLEALEEALEEHP--------EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTG--FGRTGKM  243 (413)
T ss_pred             HHHHHHHHHHHHhcCC--------CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCcch
Confidence               7888888886532        46789999999999999887    99999999999999999999973  3444444


Q ss_pred             -cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHH
Q psy15447        268 -VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTK  344 (457)
Q Consensus       268 -~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~  344 (457)
                       ..+++++.|   |++  |+||++++  +.|++++++++++.+......+..+.+.+|+.++++.++++.+++ +++.++
T Consensus       244 ~~~~~~~~~~---d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~-~~~~~~  317 (413)
T cd00610         244 FAFEHFGVEP---DIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE-EGLLEN  317 (413)
T ss_pred             hhHhhcCCCC---CeE--EEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh-ccHHHH
Confidence             345677665   554  89999974  347888999988886211222233445689999999999998876 457899


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCe
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPS  423 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~  423 (457)
                      ++++.+++++.|+++....+........++++++.+...... ..+......+++.|.++||++.+..         .+.
T Consensus       318 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~---------~~~  388 (413)
T cd00610         318 AAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG---------GNV  388 (413)
T ss_pred             HHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC---------CCE
Confidence            999999999999874321122222235678888887654100 0011256679999999999998753         368


Q ss_pred             EEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        424 IRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       424 lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +|++++..+|++|+++++++|+++
T Consensus       389 lR~~~~~~~t~~~i~~~~~~l~~~  412 (413)
T cd00610         389 IRLLPPLIITEEEIDEGLDALDEA  412 (413)
T ss_pred             EEEECCCcCCHHHHHHHHHHHHHh
Confidence            999999999999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=100.00  E-value=4.9e-38  Score=314.27  Aligned_cols=363  Identities=13%  Similarity=0.186  Sum_probs=260.7

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+.+..+.+.    .+..++...+|+++|++++
T Consensus        21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~i~~ai~~q~~~~~~~~~----~~~~~~~~~~lae~L~~~~   95 (442)
T TIGR00709        21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHN-HPNMKQKILDYLQSGLPLHT----LDLTTPLKDAFIEALLNII   95 (442)
T ss_pred             CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCC-CHHHHHHHHHHHHhccCccc----cccCcHHHHHHHHHHHHhC
Confidence            36789999999999 599999999875   345554 89999999999987432221    1225788899999999987


Q ss_pred             CC----CcEEEe-cccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCC---
Q psy15447        139 GL----EETALY-SFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNN---  195 (457)
Q Consensus       139 g~----~~~i~~-~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d---  195 (457)
                      +.    ...+|+ +||++|++.|++..   +++..+|.....+|+.+...+.+++.            .+..+++++   
T Consensus        96 p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (442)
T TIGR00709        96 PKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYR  175 (442)
T ss_pred             CCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcccc
Confidence            53    244554 89999999999854   46667888899999999888877641            122233222   


Q ss_pred             ----------HHH----HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc
Q psy15447        196 ----------MQH----LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS  257 (457)
Q Consensus       196 ----------~~~----le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~  257 (457)
                                .+.    +++.+....    . ..+++++|++||+++++|.+.|    +++|+++|++||++||+||+++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t  250 (442)
T TIGR00709       176 CPFGIGGEAGSNASIEYFENFIEDVE----S-GVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA  250 (442)
T ss_pred             ccccCCchhHHHHHHHHHHHHHHhhc----c-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence                      122    223332110    0 1256899999999999887754    8999999999999999999975


Q ss_pred             -cccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447        258 -FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       258 -~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~  333 (457)
                       +|+.   |.+ ..+++|+.|   ||+  +++|++|+  +-|+++++++ ++.+....+.  .+.+.+|++|++++++|+
T Consensus       251 GfGRt---G~~~a~~~~gv~P---Div--~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~--~T~~gnpla~aaa~a~L~  319 (442)
T TIGR00709       251 GFGRS---GTMFAFEHAGIEP---DFV--VMSKAVGGGLPLAVLLIAPE-FDAWQPAGHT--GTFRGNQLAMVTGTEALN  319 (442)
T ss_pred             CCCCC---CchhHHHHcCCCC---cEE--EEcccccCCcccEEEEEchH-HhccCCCcCC--CCCCcCHHHHHHHHHHHH
Confidence             5544   443 457789887   787  69999964  3477788877 4444322222  333469999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-------HHHHHHHHHHHHHHHHcCee
Q psy15447        334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-------VASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      .+++. ++.+++++++++|++.|+++....++....+..+.++.+.+.++...       ..+......+...|+++|++
T Consensus       320 ~i~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl  398 (442)
T TIGR00709       320 YWKDD-NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLL  398 (442)
T ss_pred             HHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeE
Confidence            98765 48899999999999999874311222122245688888887543210       11112456788899999999


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      +.+..       ...+.+|+.|++.+|++|+++++++++++++++..+
T Consensus       399 ~~~~~-------~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~  439 (442)
T TIGR00709       399 LETGG-------REGEVFRLLCPITIDQEECEEGISRFKQAVEEALAE  439 (442)
T ss_pred             EeecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            87543       124799999999999999999999999999876443

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=100.00  E-value=4.8e-38  Score=304.66  Aligned_cols=332  Identities=14%  Similarity=0.159  Sum_probs=252.1

Q ss_pred             CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      ..|..+++++|.|+|+ |||+||||.++   ..+|+ +||+|.+|+.+|+++..+..  +.   ..++...+++++|+++
T Consensus         5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~ql~~~~~~~--~~---~~~~~~~~la~~l~~~   78 (364)
T PRK04013          5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLEKLVVAG--PM---FEHEEKEEMLEELSKW   78 (364)
T ss_pred             CCCccEEEeecCEEEECCCCEEEEcccChhhccCCC-CCHHHHHHHHHHHHhcCCcc--CC---cCCHHHHHHHHHHHhh
Confidence            3578899999999995 99999999775   34565 48999999999999854322  11   1478889999999999


Q ss_pred             cCCCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHHHHHH
Q psy15447        138 MGLEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQHLEEL  202 (457)
Q Consensus       138 ~g~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~le~~  202 (457)
                      .+.+.+++++||++|++.|++...   ++..+|..+..+|+.+...+.+++            ..+..++.+|++.+++.
T Consensus        79 ~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~  158 (364)
T PRK04013         79 VNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEA  158 (364)
T ss_pred             cCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHH
Confidence            988899999999999999998653   445677778889998877666433            22456677899888887


Q ss_pred             HHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCC
Q psy15447        203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTE  277 (457)
Q Consensus       203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~  277 (457)
                      +.           +++++|++||+++.+|...|    +++|+++|++||++||+||+++..   ++|.+ ..+++++.| 
T Consensus       159 i~-----------~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~---RtG~~~a~~~~gv~P-  223 (364)
T PRK04013        159 IT-----------KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL---RTGKFLAIEHYKVEP-  223 (364)
T ss_pred             hc-----------CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC---CCCchhHHHhcCCCC-
Confidence            74           35789999999998887764    899999999999999999998632   44544 457889988 


Q ss_pred             CccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                        ||+  +++|++|.  +.|+++.++++.    ...+.  ++.+.+|++|++++++|+.+++++ +.++.++.   + ..
T Consensus       224 --Div--~~gK~lggG~P~~a~~~~~~~~----~~~~~--~T~~gnp~~~aaa~a~l~~i~~~~-l~~~~~~~---l-~~  288 (364)
T PRK04013        224 --DIV--TMGKGIGNGVPVSLTLTNFDVE----RGKHG--STFGGNPLACKAVAVTLRILRRER-LVEKAGEK---F-IE  288 (364)
T ss_pred             --CEE--EecccccCCceeEEEEeccccc----CCCcC--CCCCcCHHHHHHHHHHHHHHHhcc-HHHHHHHH---H-HH
Confidence              677  79999963  335566665541    12233  344569999999999999998764 66666654   2 22


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      +..    +.+.- .+..+.++.+.+..+         ...+.+.++++|+++.+..         .+.+||.||+.+|++
T Consensus       289 l~~----~~v~~-vRG~Gl~~gve~~~~---------~~~i~~~~~~~Gll~~~~g---------~~vlr~~Ppl~it~~  345 (364)
T PRK04013        289 IKG----ERVVT-TRGRGLMIGIVLKKP---------VGKYVEELQNRGYLVHTAG---------QRVIRLLPPLIISKD  345 (364)
T ss_pred             hcc----Cccee-eeeCcEEEEEEeCCc---------HHHHHHHHHhCCcEEeeCC---------CCEEEEeCCcccCHH
Confidence            322    21111 145678888888643         3468899999999986532         478999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy15447        436 DMNSLIETLCKSHDIAV  452 (457)
Q Consensus       436 di~~~~~~l~~~~~~~~  452 (457)
                      |+++++++|+++++++.
T Consensus       346 ~i~~~~~~l~~~l~~~~  362 (364)
T PRK04013        346 TMEEAKSAIEGVINDIL  362 (364)
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999998653

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=100.00  E-value=1.3e-37  Score=310.25  Aligned_cols=358  Identities=14%  Similarity=0.141  Sum_probs=263.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .||++||||.++   ..+|+. ||+|.+|+.+|+.+..+...    ....++...+++++|+++.
T Consensus        15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~a~~~ql~~~~~~~~----~~~~~~~~~~la~~l~~~~   89 (420)
T TIGR00700        15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHS-HPRVVDAVRTQVAEFTHTCF----MVTPYEGYVALAEKLNRIA   89 (420)
T ss_pred             CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCC-CHHHHHHHHHHHHhccCccc----cccCChHHHHHHHHHHHhC
Confidence            47889999999999 599999999775   345554 89999999999998643211    1124677889999999987


Q ss_pred             C---CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC-------------eEEEecCC-----
Q psy15447        139 G---LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC-------------KVQYFKHN-----  194 (457)
Q Consensus       139 g---~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~-------------~~~~~~~~-----  194 (457)
                      +   .++++|++||++|++.|++..   +++..+|.....+|+.+...+.+++.             .+..++.+     
T Consensus        90 p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (420)
T TIGR00700        90 PGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRD  169 (420)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence            5   357899999999999999854   46667888899999998887766542             11112221     


Q ss_pred             -----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccc
Q psy15447        195 -----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFG  259 (457)
Q Consensus       195 -----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g  259 (457)
                                 +++.+++.+....      .++.+++|++||+++.+|.+.|    +++|+++|++||++||+||+++. 
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg-  242 (420)
T TIGR00700       170 GLLDKQLSTDGELAAARAIFVIDV------GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTG-  242 (420)
T ss_pred             cccccchhHHHHHHHHHHHHHhhc------CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccC-
Confidence                       1345555553111      1267899999999999998877    89999999999999999999863 


Q ss_pred             cccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh
Q psy15447        260 TLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK  336 (457)
Q Consensus       260 ~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~  336 (457)
                       +|++|.+ ..+++++.|   ||+  ++||++++  +.|++++++++++.+....+..+|  +.+|+.|++++++++.++
T Consensus       243 -~gr~g~~~a~~~~~~~p---Di~--~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~--~~~pl~~aaa~a~l~~l~  314 (420)
T TIGR00700       243 -FARTGAMFACEHEGPEP---DLI--TTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTY--AGNPLACAAALAVLAIIE  314 (420)
T ss_pred             -CcccchhHHHhhcCCCC---CEE--EeeccccCCcceEEEEecHHHHhhcCCCCcCCCC--CcCHHHHHHHHHHHHHHH
Confidence             3444433 446678777   665  79999962  448899999998887544333344  458999999999999887


Q ss_pred             hCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc
Q psy15447        337 ANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ  415 (457)
Q Consensus       337 ~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~  415 (457)
                      +. .+.+++++..+++++.|+++.. .+.+..+ .+.+.++++.+.++.....+......+.+.|.++||++.+...   
T Consensus       315 ~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~---  389 (420)
T TIGR00700       315 SE-GLIERARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGM---  389 (420)
T ss_pred             hc-cHHHHHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCC---
Confidence            65 4788888999999988877432 2223222 3558888887743211111122456788888999999987542   


Q ss_pred             ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        416 EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       416 ~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          ..+++||+|++.+|++++++++++|+++++
T Consensus       390 ----f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       390 ----FGNIIRFLPPLTIGDELLSEGLDILCAILA  419 (420)
T ss_pred             ----CCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence                137999999999999999999999998874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=100.00  E-value=1.5e-37  Score=311.24  Aligned_cols=381  Identities=19%  Similarity=0.230  Sum_probs=276.0

Q ss_pred             hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhc
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      ++++.+..+++.|.+...+..... ....|+++++++|+||| .||++||||.++.   .+|+ +||+|.+|+++|+.+.
T Consensus         2 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~   80 (423)
T TIGR00713         2 SENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGH-AHPRVVEAVKEALERG   80 (423)
T ss_pred             cHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhC
Confidence            457778888999988875443321 22358899999999999 5999999998753   3455 4899999999999873


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhc--
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIAS--  184 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~--  184 (457)
                      . .+      +..++...+|+++|+++++ .+++++++||++|++.|++.   ++++..+|..+..+|+.......++  
T Consensus        81 ~-~~------~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~  153 (423)
T TIGR00713        81 T-SY------GAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGS  153 (423)
T ss_pred             C-cC------CCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccC
Confidence            2 11      2256778999999999875 46788999999999999985   3456667777888888644332211  


Q ss_pred             -----------------CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447        185 -----------------RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR  243 (457)
Q Consensus       185 -----------------g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~  243 (457)
                                       +.....++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++|
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~--------~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~  225 (423)
T TIGR00713       154 GAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG--------EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALT  225 (423)
T ss_pred             cccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcC--------CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHH
Confidence                             01245677889999999987532        46789999999999998877    78999999


Q ss_pred             HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCC
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASL  320 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~  320 (457)
                      ++||++||+||+|+..++|.  .+..+++++.|   |++  ||||++|.  +.|++++++++++.+......+. .+.+.
T Consensus       226 ~~~~~llI~DEv~~g~r~g~--~~~~~~~~~~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~  298 (423)
T TIGR00713       226 EEYGSLLIFDEVMTGFRVAL--GGAQEYFGVEP---DLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSG  298 (423)
T ss_pred             HHhCCEEEEEccccccccCc--chhHHHhCCCc---chh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCC
Confidence            99999999999996445543  33456788877   665  89999973  46999999999988864221112 23356


Q ss_pred             cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHH
Q psy15447        321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQ  394 (457)
Q Consensus       321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~  394 (457)
                      +|+.|++++++|+.+++.+ +.++++++.+++++.|.++....++.......+.++.+.+..+...      ..+.....
T Consensus       299 ~~~~~aaa~a~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~  377 (423)
T TIGR00713       299 NPLAMAAGLATLKLLDEEG-VYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFA  377 (423)
T ss_pred             CHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHH
Confidence            9999999999999987653 6778888888887777542111343332234577777766532100      00112345


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+++.|+++||++.+..+         +.+|++++  +|++|+++++++|+++++++
T Consensus       378 ~~~~~l~~~Gv~v~~~~~---------~~~~l~~~--~t~~~i~~~~~~l~~~l~~~  423 (423)
T TIGR00713       378 KFFHEMLDKGVFLPPSQF---------EACFLSAA--HTEEDIENTIEAAEEVFAEL  423 (423)
T ss_pred             HHHHHHHHCCeEEecCCc---------cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence            788899999999875432         45788876  79999999999999988653

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=100.00  E-value=4e-37  Score=308.98  Aligned_cols=385  Identities=14%  Similarity=0.159  Sum_probs=271.4

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      ++++..+...++.+.+..+        ..|+++++++|+||| .|||+||||.++   ..+|+ +||+|.+|+.+|+++.
T Consensus        16 ~s~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~   86 (451)
T PRK06918         16 KAASLLERRQNIVPKGVSN--------GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGH-SHPKVKEALHKQVDQY   86 (451)
T ss_pred             CHHHHHHHHHHhhcccccc--------CCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCC-CCHHHHHHHHHHHHhc
Confidence            3445555555554433321        136789999999999 599999999775   33455 4899999999999985


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhc
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIAS  184 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~  184 (457)
                      .+...  .  ...++...+|+++|+++++.   ++++|++||++|++.|++..   .++.++|.....||+.+..++.++
T Consensus        87 ~~~~~--~--~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~  162 (451)
T PRK06918         87 IHTGF--N--VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMT  162 (451)
T ss_pred             cCccc--c--ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhc
Confidence            43221  1  12468889999999998862   57899999999999999854   567788889999999988887765


Q ss_pred             CCe-------------EEEecCCC-----------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        185 RCK-------------VQYFKHNN-----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       185 g~~-------------~~~~~~~d-----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      +..             +..+++++                 .+.+++.+....      .++++++|++||+++.+|.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~iAavi~EPi~g~gG~~~  236 (451)
T PRK06918        163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV------APETIAAVVMEPVQGEGGFIV  236 (451)
T ss_pred             CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc------CCCceEEEEECcccCCCCCcc
Confidence            421             12222221                 112333332110      125789999999999888866


Q ss_pred             C----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHH
Q psy15447        235 P----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHH  307 (457)
Q Consensus       235 ~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~  307 (457)
                      |    +++|+++|++||++||+||+++ +|+.|.  .+..+++++.|   |++  |+||++++  +-|++++++++++.+
T Consensus       237 ~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~--~~a~~~~~v~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~  309 (451)
T PRK06918        237 PSKKFVQEVRNICSEHGILFVADEIQTGFARTGK--YFAIEHFDVVP---DLI--TVSKSLGAGVPISGVIGRKEIMDES  309 (451)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc--eehhHhcCCCC---CEE--eeehhhcCCCccEEEEEcHHHHhcc
Confidence            5    8899999999999999999975 444432  22346677766   655  89999962  348899999988877


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      ....+..  +.+.+|+.++++.++++.+++. .+.+++++.++++.+.|+++.. .+.+.-+ .+.+.++.+.+..+...
T Consensus       310 ~~~~~~~--T~~g~~l~~aaa~a~l~~i~~~-~~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~  385 (451)
T PRK06918        310 APGELGG--TYAGSPLGCAAALAVLDIIEKE-NLNDRAIELGKVVMNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKT  385 (451)
T ss_pred             CCCCcCc--CCCcCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhCCCceee-ccceeEEEEEEccCCCc
Confidence            5433333  3346999999999999988654 4778888999999998877421 1111112 34466666655321100


Q ss_pred             -HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q psy15447        387 -VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLN  456 (457)
Q Consensus       387 -~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~~  456 (457)
                       ..+......+.+.|.++||++.+...       ..+.+||+|++.+|+++|++++++|+++++++..+.|
T Consensus       386 ~~~~~~~~~~l~~~~~~~Gvlv~~~~~-------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~~~  449 (451)
T PRK06918        386 KEPDKTLTANICKEANKRGLLLLSAGT-------YGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKAN  449 (451)
T ss_pred             CCCcHHHHHHHHHHHHHCCeEEeecCC-------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHhhc
Confidence             11122456788899999999977531       1378999999999999999999999999988766544

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=100.00  E-value=3e-38  Score=313.34  Aligned_cols=345  Identities=13%  Similarity=0.121  Sum_probs=248.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHH--HHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDC--IDKNGVGSCGPRGFYGTNVVHLDLENDIAS  136 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~--l~~~~~~~~~~~~~~g~~~~~~~l~~~la~  136 (457)
                      .|..+++++|+||| .||++||||.++   ..+|+ +||+|.+|+.+|  ...+.+.+   .   ..++...+++++|++
T Consensus        40 ~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~q~~~~~l~~~~---~---~~~~~~~~la~~l~~  112 (464)
T TIGR00699        40 FLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGY-NNPALLKAAQSPEMATTLINRP---A---LGNFPSKDWAKILKE  112 (464)
T ss_pred             cceEEEecccCEEEeCCCCEEEEccCCHhhhcCCC-CCHHHHHHHHHHHHHHhhcccc---c---CCcHHHHHHHHHHHH
Confidence            47889999999999 599999999875   34455 489999999985  33332211   1   135567778888754


Q ss_pred             ----hcC--CCcEEEecccHHHHHHHHHhhcC------------------------------CCCEEEEeCcccHHHHHH
Q psy15447        137 ----FMG--LEETALYSFGFSTSASAIAAYVK------------------------------RNDAVFVDENINFAIQTG  180 (457)
Q Consensus       137 ----~~g--~~~~i~~~sG~~a~~~ai~a~~~------------------------------~gd~v~~~~~~h~~~~~~  180 (457)
                          +.+  .++++|++||++|++.|++....                              +.++|.....+|+.+..+
T Consensus       113 ~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~a  192 (464)
T TIGR00699       113 GILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGS  192 (464)
T ss_pred             hHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHH
Confidence                543  46889999999999999986521                              125778899999999888


Q ss_pred             HHhcCCeE-----------EEecC-------------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        181 LIASRCKV-----------QYFKH-------------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       181 ~~~~g~~~-----------~~~~~-------------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      +.+++...           ..++.                   ++++++++++++..        +.+++||+||+++.+
T Consensus       193 ls~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--------~~iAAvI~EPv~g~~  264 (464)
T TIGR00699       193 LSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWH--------KPVAAIIVEPIQSEG  264 (464)
T ss_pred             HHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcC--------CcEEEEEEeCCCCCC
Confidence            87765211           11111                   12455666665432        468999999999999


Q ss_pred             CCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHH
Q psy15447        231 ADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE  305 (457)
Q Consensus       231 G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~  305 (457)
                      |.+.|    +++|+++|++||++||+||++. | +|++|.+ ..+++|+. +.+||+  +++|++|. ||++++++.+ .
T Consensus       265 G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-G-fGrtG~~fa~e~~gv~-~~PDi~--t~gK~lg~-gG~~~~~~~~-~  337 (464)
T TIGR00699       265 GDNHASPDFFRKLRDITKKHNVAFIVDEVQT-G-VGATGKFWAHEHWNLD-DPPDMV--TFSKKFQT-AGYFFHDPAF-R  337 (464)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-C-CCCCcchhHHHhcCCC-CCCCEE--Eehhhhcc-CCccccchhc-c
Confidence            99987    9999999999999999999984 2 3666665 45888986 233786  89999963 3555444321 1


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cC-CeEEe-ccCCCCeEEEEecC
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQ-RFLVQ-GHRDTPLKYLYLQK  382 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~-~~~~~-~~~~~~~~~i~~~~  382 (457)
                      ......+.  .+.+.+|++|++++++|+.+++. .+.+++++++++|++.|+++.. .+ -+..+ +...+.++.+.+.+
T Consensus       338 ~~~~~~~~--~T~~gnp~~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~  414 (464)
T TIGR00699       338 PNKPYRQF--NTWMGDPSRALILREIIQEIKRK-DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD  414 (464)
T ss_pred             CCCCcccc--cCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC
Confidence            10111122  23346999999999999999765 4889999999999999987431 22 12111 12568888888754


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ..       .+..+.+.|+++|+++...+         .+.+||.|++.+|++||++++++|++++
T Consensus       415 ~~-------~~~~i~~~~~~~Gvl~~~~g---------~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       415 EA-------KRDKLLKKARNNGVNIGGCG---------VKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             HH-------HHHHHHHHHHHCCcEEecCC---------CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            32       46789999999999986532         4789999999999999999999998763

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06148 hypothetical protein; Provisional

Probab=100.00  E-value=7.3e-38  Score=338.96  Aligned_cols=363  Identities=14%  Similarity=0.125  Sum_probs=271.1

Q ss_pred             CCceeeecCCCcEEE-ECCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         62 SSKYVVDQKSGYIVN-INGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      ..|+++++++|+||| .|||+||||.++ ..+|+ +||+|.+|+.+|+.+.....   +   ..++...+++++|++.++
T Consensus       605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~~~lGH-~hp~v~~Ai~~q~~~l~~~~---~---~~~~~~~~lAe~L~~~~p  677 (1013)
T PRK06148        605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNVCHVGH-AHPRVVAAAARQAARLNTNT---R---YLHDAIVAYAERLTATLP  677 (1013)
T ss_pred             CCCceEEEeeecEEEECCCCEEEEcccChhhcCC-CCHHHHHHHHHHHhhcCCcC---C---cCCHHHHHHHHHHHHhCC
Confidence            357899999999999 599999999876 23454 48999999999999853221   1   247888999999999875


Q ss_pred             --CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCC------------eE--------EEecCC
Q psy15447        140 --LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRC------------KV--------QYFKHN  194 (457)
Q Consensus       140 --~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~--------~~~~~~  194 (457)
                        .+.++|++||++|++.|++..   +++.++|..+..+|+.+...+.+++.            .+        ...+.+
T Consensus       678 ~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  757 (1013)
T PRK06148        678 DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER  757 (1013)
T ss_pred             CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence              467899999999999999754   56778889999999998776655431            11        111222


Q ss_pred             --CH-------HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-cccc
Q psy15447        195 --NM-------QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFGT  260 (457)
Q Consensus       195 --d~-------~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g~  260 (457)
                        +.       +++++.++....     .++.+++||+||+++.+|.+.|    +++++++|++||+++|+||++ ++|+
T Consensus       758 ~~~~~~~~~~~~~l~~~i~~~~~-----~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGR  832 (1013)
T PRK06148        758 WPDAEHGRRFAESVAEQIAAMAA-----KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGR  832 (1013)
T ss_pred             CChhhhHHHHHHHHHHHHHhhhc-----cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCC
Confidence              21       345555543211     1256899999999999998877    899999999999999999997 5655


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN  338 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~  338 (457)
                      +|.. .+..+++|+.|   ||+  +++|++|.  +-|++++++++++.+.... .+..|.+.+|++|++++++|++++++
T Consensus       833 tG~~-~~a~e~~gv~P---Div--t~gK~lggG~Plgav~~~~ei~~~~~~g~-~~~~Tf~gnpla~aaa~a~L~~i~~e  905 (1013)
T PRK06148        833 VGSH-WWAFETQGVVP---DIV--TMGKPIGNGHPMGAVVTTREIADSFDNGM-EYFNTFGGNPVSCAIGLAVLDIIEDE  905 (1013)
T ss_pred             CCCc-chhhhhcCCCc---cee--eecccccCCcceEEEEEcHHHHhhccCCC-ccccCCCCCHHHHHHHHHHHHHHhhc
Confidence            5431 23568899988   787  89999963  4477889999998875432 23344456999999999999999765


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                       ++.+++++++++|++.|+++....++.......+.++.+.+..+... +.+......+++.|+++||++.+.+      
T Consensus       906 -~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g------  978 (1013)
T PRK06148        906 -DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG------  978 (1013)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC------
Confidence             58899999999999999875321222111245678888887643211 1222245679999999999997643      


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       ...+.+||.|++.+|++|+|+++++|+++++++
T Consensus       979 -~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148        979 -PHDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred             -CCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence             124899999999999999999999999999765

>KOG1401|consensus

Probab=100.00  E-value=2.1e-37  Score=286.29  Aligned_cols=380  Identities=19%  Similarity=0.185  Sum_probs=275.3

Q ss_pred             ChhhHHHHHcccCCCCCCCccccc-cccCCceeeecCCCcEEEE-CCeeeEEeecCCc---cCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKF-KDVSSKYVVDQKSGYIVNI-NGIPCINFATHNY---LSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~  109 (457)
                      .+++.........+..+.++.... .....|.++++++|+++++ +|++||||++..+   +|++ ||++.+++.+|+.+
T Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k   87 (433)
T KOG1401|consen    9 KSEDASNAASVSMPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAKK   87 (433)
T ss_pred             cCcccccchhhccccccccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCC-CHHHHHHHHHHHhh
Confidence            344555555555555555554443 3445788899999999995 9999999998644   4544 89999999999999


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhc---CCCcEEEecccHHHHHHHHHhhcC----C-----CCEEEEeCcccHHH
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFM---GLEETALYSFGFSTSASAIAAYVK----R-----NDAVFVDENINFAI  177 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~~~~i~~~sG~~a~~~ai~a~~~----~-----gd~v~~~~~~h~~~  177 (457)
                      .++...++    .+.+ ..++++.|.+..   ..++++|.+||++||+.|++...+    +     -.+|.....+|+.+
T Consensus        88 ~~hs~~~~----~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~t  162 (433)
T KOG1401|consen   88 LGHSSNGY----FTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRT  162 (433)
T ss_pred             heeccCcc----ccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcc
Confidence            88754433    3555 888999999998   577899999999999999976432    1     14788899999999


Q ss_pred             HHHHHhcC------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHH
Q psy15447        178 QTGLIASR------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILS  241 (457)
Q Consensus       178 ~~~~~~~g------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~  241 (457)
                      ..++...+            ..+....+||+.++++.++.+.        +.+++||+||+++.+|.+++    +..|+.
T Consensus       163 lgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~--------~~IaAVIvEPiqGaGG~~p~~peFl~~L~k  234 (433)
T KOG1401|consen  163 LGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHK--------GEIAAVIVEPIQGAGGIIPADPEFLIGLRK  234 (433)
T ss_pred             hhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCC--------CceEEEEEecccCCCCcccCCHHHHHHHHH
Confidence            98888654            2345567889999999999865        56899999999998888765    789999


Q ss_pred             HHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCC---cce
Q psy15447        242 LRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGS---GYC  315 (457)
Q Consensus       242 l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~---~~~  315 (457)
                      +|+++|++||+||++. +|++|.  .|..+++++.|   ||.  |++|.+|  .+-|++.+++++++.+....+   +.+
T Consensus       235 ~C~~~~vl~I~DEV~tG~gR~g~--~~a~e~~~~~P---DI~--t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~T  307 (433)
T KOG1401|consen  235 ECDDNGVLLIFDEVQTGLGRLGY--GWAQEYFGVTP---DIT--TVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGT  307 (433)
T ss_pred             HHhhcCceEEeehhhhCccccch--HHHHHHhCcCC---cce--eehhhccCCceeEEEeehHHHHhhcCCCCccccCcc
Confidence            9999999999999874 566654  45679999988   677  8999995  345888999999999977665   445


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcchHHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDEVASKKLLQ  394 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~  394 (457)
                      |+  .+|++|.++..+++.+.. ++..+++.+..+.|++.|.+...-..-.+.+ ...+.++.+....+.         .
T Consensus       308 f~--gnpLacsa~~~~l~~l~~-~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~---------~  375 (433)
T KOG1401|consen  308 FS--GNPLACSAGIKVLDELKD-PETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV---------Y  375 (433)
T ss_pred             cC--CChhhhhHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech---------h
Confidence            54  499999999999998864 5688999999999988886621111222222 233445555444332         2


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEe----cCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC----NISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~----~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+.+..+++|.++.+...     ......+||.|    +..+|+|.++++++++.+.++++.
T Consensus       376 ~~~d~~~~~~ll~~~~~~-----~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~  432 (433)
T KOG1401|consen  376 KFADAAREQGLLILTLGK-----GLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN  432 (433)
T ss_pred             hhhhhhhhhhHHHHHHhc-----ccccceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence            233333333333322221     01123455555    334569999999999999988764

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=3.7e-36  Score=299.37  Aligned_cols=343  Identities=14%  Similarity=0.176  Sum_probs=260.8

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++| .||++||||.++   +++|+ +||++.+++.+++++.....   .  .+..+...+++++|+++.
T Consensus        21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~-~~p~v~~a~~~~~~~~~~~~---~--~~~~~~~~~la~~l~~~~   94 (396)
T PRK02627         21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGH-CHPKLVEAIQEQAAKLIHTS---N--LYYIEPQEELAEKLVELS   94 (396)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCC-CCHHHHHHHHHHHhhccccc---c--ccCCHHHHHHHHHHHhhc
Confidence            47889999999999 599999999874   56676 48999999999998753221   1  124788999999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhcC---C-----CCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYVK---R-----NDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQH  198 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~~---~-----gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~  198 (457)
                      +.+++++++||++|+..+++++..   +     .+++..+..+|+....+....+..            +..++++|+++
T Consensus        95 ~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  174 (396)
T PRK02627         95 GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEA  174 (396)
T ss_pred             CCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHH
Confidence            999999999999999999986542   2     345667777888877766655422            34567789999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFG  273 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~  273 (457)
                      +++.+.           +++++|++||+++++|.. .+   +++|+++|++||++||+||+|+.  +|++|.+ ..+.++
T Consensus       175 l~~~i~-----------~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g--~g~~g~~~~~~~~~  241 (396)
T PRK02627        175 LKAAIT-----------DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTG--MGRTGKLFAYQHYG  241 (396)
T ss_pred             HHHhcC-----------CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcC--CCccCceeeehhcC
Confidence            998873           356899999999998854 33   89999999999999999999872  3444443 334567


Q ss_pred             CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      +.|   |++  ||||++|+  +.|++++++++++.+.......++  +.+++.++++.++++.+++. +..++++++.++
T Consensus       242 ~~p---di~--t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~~~l~~~~~~-~~~~~~~~~~~~  313 (396)
T PRK02627        242 IEP---DIM--TLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTF--GGNPLACAAALAVIEIIEEE-GLLENAAEVGEY  313 (396)
T ss_pred             CCC---CEE--EEcchhhCCcccEEEEEcHHHHhccCCCCCCCCC--CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHH
Confidence            765   555  79999973  348899999988877543333333  45999999999999988654 477888888888


Q ss_pred             HHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        352 MHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       352 l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      +++.|.++.. .+.+... ++.+.++++.+..         ...++++.|+++||++.+..         .+++|++|++
T Consensus       314 ~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~---------~~~~~~~~l~~~Gv~v~~~~---------~~~lRi~~~~  374 (396)
T PRK02627        314 LRAKLRELLEKYPGIKEV-RGLGLMIGIELDR---------PAAEIVKKALEKGLLINVTG---------DNVLRLLPPL  374 (396)
T ss_pred             HHHHHHHHHHhCCCeeee-ccCcEEEEEEecC---------cHHHHHHHHHHCCeEEeecC---------CCEEEEECCc
Confidence            8888876321 1122221 3456778887732         34679999999999998753         3689999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHh
Q psy15447        431 SHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+|++++++++++|+++++++
T Consensus       375 ~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        375 IISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             ccCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999988754

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=100.00  E-value=5.2e-37  Score=305.88  Aligned_cols=345  Identities=13%  Similarity=0.138  Sum_probs=245.8

Q ss_pred             eeecCCCcEEEE--CCeeeEEeecC---CccCCCCChhhH--HHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         66 VVDQKSGYIVNI--NGIPCINFATH---NYLSFVENPDIE--KCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        66 ~i~~~~g~~~~~--~G~~~id~~s~---~~l~~~~~p~i~--~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .+++++|.|+|+  |||+||||.++   ..+|+ +||+|.  +|+.+|+.+..+....+.  ....+...++.++|++..
T Consensus        22 ~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh-~~p~v~~~~ai~~q~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~   98 (431)
T TIGR03251        22 DLDRSRGSVLVDARDGRRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNS--DVYTVAMARFVDTFARVL   98 (431)
T ss_pred             EEEeccCCEEEECCCCCChhhcccChhhcCCCC-CChhhhHHHHHHHHHHHhhhcccccC--CCCCHHHHHHHHHHHHhc
Confidence            369999999995  89999999775   23455 489999  999999987532111111  124677788888888875


Q ss_pred             ---CCCcEEEecccHHHHHHHHHhhc----------C-----CCCEEEEeCcccHHHHHHHHhcCCeEEE----------
Q psy15447        139 ---GLEETALYSFGFSTSASAIAAYV----------K-----RNDAVFVDENINFAIQTGLIASRCKVQY----------  190 (457)
Q Consensus       139 ---g~~~~i~~~sG~~a~~~ai~a~~----------~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~~----------  190 (457)
                         +.++++|++||++|++.|++...          +     +.++|.....+|+.+..++.+++.....          
T Consensus        99 ~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~  178 (431)
T TIGR03251        99 GDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP  178 (431)
T ss_pred             CCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCc
Confidence               24678999999999999998653          1     2347778889999998887776521000          


Q ss_pred             ---e-----cC-------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHH
Q psy15447        191 ---F-----KH-------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSK  245 (457)
Q Consensus       191 ---~-----~~-------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~  245 (457)
                         .     +.             ++++++++.+...        ++++++|++||+++.+|.+.|    +++|+++|++
T Consensus       179 ~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~  250 (431)
T TIGR03251       179 RIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAER--------PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDE  250 (431)
T ss_pred             cCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhC--------CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHH
Confidence               1     10             1123334444432        267899999999999998864    8999999999


Q ss_pred             cCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecH--HHHHHHHhhCCcceecCCCcH
Q psy15447        246 YQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSS--YIIEHHRLSGSGYCFSASLPP  322 (457)
Q Consensus       246 ~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~--~~~~~~~~~~~~~~~~~~~~~  322 (457)
                      ||++||+||+++ | +|++|.+ ..+++|+.|   ||+  +++|++ ..+|++.+++  ++.+........+..+.+.+|
T Consensus       251 ~g~llI~DEV~t-G-~GrtG~~~a~~~~gv~P---Di~--~~gK~~-~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnp  322 (431)
T TIGR03251       251 HDALLIFDEVQT-G-VGLTGTAWAYQQLGVQP---DIV--AFGKKT-QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNL  322 (431)
T ss_pred             cCCEEEEecchh-c-cCccchHHHHHhcCCCC---CEE--EecccC-ccceEEecchHHHhhhhcccCccccCCCCCCCH
Confidence            999999999987 2 3556655 457889887   787  699987 3456666654  222211110111122234699


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      +.|++++++|+++++. .+.++++++.+++++.|+++.. .+++....+..+.++.+.+....       ....+.+.|+
T Consensus       323 l~~aaa~a~L~~l~~~-~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-------~~~~~~~~l~  394 (431)
T TIGR03251       323 VDMVRATRILEIIEEE-RLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-------DRDEVIRQLY  394 (431)
T ss_pred             HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-------HHHHHHHHHH
Confidence            9999999999999765 4788999999999999877421 12132222345788888886432       4567999999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ++||++.+..         .+.+||+|++.+|++|+|+++++|++
T Consensus       395 ~~Gvl~~~~g---------~~~lr~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       395 REGVLLLGCG---------ERSIRFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             hCCeEEecCC---------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence            9999986543         36899999999999999999999976

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=3.2e-36  Score=297.08  Aligned_cols=338  Identities=14%  Similarity=0.161  Sum_probs=253.0

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL  140 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~  140 (457)
                      .|.++++++|+|+| .||++||||.|+ ++++++.||++.+|+.+++.+++..+.  .   ...+...++++.+...  .
T Consensus        11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~--~---~~~~~~~~la~~l~~~--~   83 (375)
T PRK04260         11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPN--L---YLNSLQEEVAQKLIGD--K   83 (375)
T ss_pred             CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccC--c---cCCHHHHHHHHHHhcC--c
Confidence            36789999999999 599999999886 577888899999999999988643221  1   1233344444433321  2


Q ss_pred             C-cEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHHHHHHHHH
Q psy15447        141 E-ETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQHLEELLR  204 (457)
Q Consensus       141 ~-~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~le~~l~  204 (457)
                      + .+++++||++|+..|++..   .++.++|..+..+|+++..++..++.+            +...+++|++++++.+.
T Consensus        84 ~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~  163 (375)
T PRK04260         84 DYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN  163 (375)
T ss_pred             CCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC
Confidence            2 3578899999999998875   456667778899999988887665432            22335789999988774


Q ss_pred             hhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCc
Q psy15447        205 QQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEV  279 (457)
Q Consensus       205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~  279 (457)
                                 +.+++|++|++++++|.+.|    +++++++|++||+++|+||+|+ | +|++|.++ .+.+++.|   
T Consensus       164 -----------~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g-~g~~g~~~~~~~~~~~p---  227 (375)
T PRK04260        164 -----------KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT-G-MGRTGKLYAFEHYGIEP---  227 (375)
T ss_pred             -----------CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-C-CCcccchhhhHhhCCCC---
Confidence                       24589999999999998866    8999999999999999999985 3 56666553 35678877   


Q ss_pred             cEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        280 DMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       280 Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                      |++  ||||++++  +.|++++++++++.+.......+|  +.+|+.++++.++++.++.. +++++++++.+++++.|.
T Consensus       228 di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~--~~~~~~~~aa~a~l~~~~~~-~~~~~~~~~~~~~~~~l~  302 (375)
T PRK04260        228 DIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTF--GGNKLSMAAASATLDIMLTA-GFLEQALENGNYLQEQLQ  302 (375)
T ss_pred             CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCC--CcCHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHH
Confidence            555  89999963  569999999988877543333333  45899999999999988654 577888888888888776


Q ss_pred             cccccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        358 QHKVTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       358 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                      +.....+ +... +..+.++++.+..         ...++.++|.++||++.+..         .+.+|++++..+|++|
T Consensus       303 ~~~~~~~~~~~~-~~~g~~~~~~~~~---------~~~~~~~~l~~~Gi~v~~~~---------~~~lR~~~~~~~t~~~  363 (375)
T PRK04260        303 KALQDKETVTTV-RGLGYMIGIETTA---------DLSQLVEAARDKGLIVLTAG---------TNVIRLLPPLTLTKEE  363 (375)
T ss_pred             HHHhhCCCeeEE-eccceEEEEEecC---------cHHHHHHHHHhCCCEEecCC---------CCEEEEcCCCccCHHH
Confidence            5321122 2222 3467888888743         34578999999999987542         3789999999999999


Q ss_pred             HHHHHHHHHHH
Q psy15447        437 MNSLIETLCKS  447 (457)
Q Consensus       437 i~~~~~~l~~~  447 (457)
                      +++++++|+++
T Consensus       364 i~~~l~~l~~~  374 (375)
T PRK04260        364 IEQGIAILSEV  374 (375)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=100.00  E-value=3.5e-36  Score=299.98  Aligned_cols=376  Identities=13%  Similarity=0.163  Sum_probs=258.0

Q ss_pred             hhHHHHHcccCCCCCCCcccccc--ccCCceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         37 INVDALINNWTPEPIVSKAEKFK--DVSSKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      .++.+.+.+..|.+..++.....  +...|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++.
T Consensus         2 ~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~   80 (431)
T PRK06209          2 QLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHA-YPPVVEAVREALQDG   80 (431)
T ss_pred             HHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCC-CHHHHHHHHHHHHhC
Confidence            35666777778888876555433  22468899999999999 599999999765   345554 899999999999974


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHhh---cCCCCEEEE-eCcccHH---HHHHHH
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAAY---VKRNDAVFV-DENINFA---IQTGLI  182 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~-~~~~h~~---~~~~~~  182 (457)
                      ..       +........+|+++|+++++ .++++|++||++|++.|++..   +++..++.. ...+|+.   +.....
T Consensus        81 ~~-------~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~  153 (431)
T PRK06209         81 CN-------FTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTP  153 (431)
T ss_pred             cC-------CCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCC
Confidence            31       11234455678999999874 578899999999999999854   355444444 3344431   110000


Q ss_pred             hc-C------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447        183 AS-R------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       183 ~~-g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa  255 (457)
                      .+ +      ..+..++++|++++++.+++..        +++++|++||++++.+...++++|+++|++||++||+||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv  225 (431)
T PRK06209        154 MSAGIPASVSALTVTFRYNDIASLEALFEDHP--------GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEM  225 (431)
T ss_pred             CCCCCChhHhccccccCCCCHHHHHHHHHhCC--------CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence            11 1      1245678999999999997532        4678999999997644444499999999999999999999


Q ss_pred             cccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHH--HHh--hCCcceecC--CCcHHHHHH
Q psy15447        256 VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEH--HRL--SGSGYCFSA--SLPPFLAVA  327 (457)
Q Consensus       256 ~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~--~~~--~~~~~~~~~--~~~~~~~aa  327 (457)
                      +. |. +.++.++.+++++.|   ||+  +++|++|+  ++|++++++++++.  +..  ....+.+++  +.+|+.|++
T Consensus       226 ~t-G~-~~~~~g~~~~~gv~P---Di~--t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aa  298 (431)
T PRK06209        226 IT-GF-RWHMRGAQKLYGIVP---DLS--CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAA  298 (431)
T ss_pred             cc-cC-CcCcchhhHHhCCCc---cee--eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHH
Confidence            84 32 334455666789877   675  89999974  67889999999886  311  122333333  358899999


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec-CCcchHHHHHHHHHHHHHHHHcCee
Q psy15447        328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ-KSDDEVASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      ++++|++++++ .+.++++++.+++++.|+++....++....+..+..+.+.+. ..............+.+.|+++|++
T Consensus       299 a~a~l~~i~~~-~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~  377 (431)
T PRK06209        299 AIATMAIYRDE-DVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVL  377 (431)
T ss_pred             HHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcc
Confidence            99999999766 488999999999999987632112222111112223333221 1110000111234688889999997


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.+                ++++..||++||++++++++++++++.
T Consensus       378 ~p~----------------l~is~~ht~~dId~~l~~l~~~l~~~~  407 (431)
T PRK06209        378 MPS----------------LVVSYAHGDADIERTIDAVHGALGVYR  407 (431)
T ss_pred             ccc----------------ccccccCCHHHHHHHHHHHHHHHHHHH
Confidence            521                244568999999999999999998773

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=7.4e-36  Score=312.12  Aligned_cols=386  Identities=11%  Similarity=0.041  Sum_probs=264.1

Q ss_pred             hHHHHHcccCCCCCCCccccccc-cCCceeeecCCCc----EEE-ECCe----eeEEeecCC-ccCCC--CChhhHHHHH
Q psy15447         38 NVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGY----IVN-INGI----PCINFATHN-YLSFV--ENPDIEKCAI  104 (457)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~----~~~-~~G~----~~id~~s~~-~l~~~--~~p~i~~a~~  104 (457)
                      ..+++.++-...-|||..+.... ...+.+|++++|.    |++ .||+    +|+|+.++. ..+++  +||+|.+|+.
T Consensus       313 ~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~  392 (817)
T PLN02974        313 RLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVA  392 (817)
T ss_pred             HHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHH
Confidence            33444444434444443333222 2357889999998    888 4898    999998763 23333  4899999999


Q ss_pred             HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc--------------------
Q psy15447        105 DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV--------------------  161 (457)
Q Consensus       105 ~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~--------------------  161 (457)
                      +|+.++++...    ...++++..+|+++|++..+   .++++|++||++|++.||+...                    
T Consensus       393 ~Qa~rl~hv~~----~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~  468 (817)
T PLN02974        393 YAAGRYGHVMF----PENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGG  468 (817)
T ss_pred             HHHhhCCcccc----CccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence            99999875432    12368999999999999775   3578899999999999998542                    


Q ss_pred             --CCCCEEEEeCcccHHHHHHHHhcCCe--------E------EEecC----------------C--C------------
Q psy15447        162 --KRNDAVFVDENINFAIQTGLIASRCK--------V------QYFKH----------------N--N------------  195 (457)
Q Consensus       162 --~~gd~v~~~~~~h~~~~~~~~~~g~~--------~------~~~~~----------------~--d------------  195 (457)
                        ++.++|.....||+.+..++.+++..        .      .+++.                .  +            
T Consensus       469 ~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  548 (817)
T PLN02974        469 DLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESR  548 (817)
T ss_pred             cCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccc
Confidence              13347888999999999888877521        0      01100                0  0            


Q ss_pred             -----------------HHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        196 -----------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       196 -----------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                       .+.+++.|++...   ...++++++||+||+ ++.+|.+.|    +++|+++|++||++||+|
T Consensus       549 ~~~f~~~r~~~~~~~~~~~~le~~l~~~~~---~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~D  625 (817)
T PLN02974        549 DEVFDKTRDSTPLAKAYRSYIEQQLDEYEA---SAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFD  625 (817)
T ss_pred             cccccccccchhhhHHHHHHHHHHHHhhcc---ccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Confidence                             1234444442110   011257899999996 788888765    899999999999999999


Q ss_pred             cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh----CCcceecCCCcHHHH
Q psy15447        254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS----GSGYCFSASLPPFLA  325 (457)
Q Consensus       254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  325 (457)
                      |+++ ||++|.  .+..+++|+.|   ||+  +++|++++   +-|++++++++.+.+...    ...+.+|.+.||++|
T Consensus       626 EV~TGfGRtG~--~fa~e~~gv~P---DIi--~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~c  698 (817)
T PLN02974        626 EVFTGLWRLGV--ESAWELLGCKP---DIA--CYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGC  698 (817)
T ss_pred             ecccCCCcccc--hhhHHhcCCCC---CEE--eecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHH
Confidence            9874 555543  33468899988   787  89999952   357788999999887421    111233445699999


Q ss_pred             HHHHHHHHHHhhCc---HHHHHHHHHHHHHHHHh-hcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKANP---SLLTKLREKCNTMHSLL-SQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMC  400 (457)
Q Consensus       326 aaa~a~l~~~~~~~---~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l  400 (457)
                      |+++++|+++++.+   .+.++.+++.+++.+.| +.+...+.+.-+ ...+.++.+.+.++... ......+..+.+.+
T Consensus       699 Aaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~  777 (817)
T PLN02974        699 AAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRL  777 (817)
T ss_pred             HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHH
Confidence            99999999998753   34444455555555555 222112322222 34578888888654211 11112456788889


Q ss_pred             H-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        401 I-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       401 ~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      + ++|+++++.          .+.+++++|+.+++++++++++++++.+
T Consensus       778 ~~~~Gl~~r~~----------Gnvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        778 RREDGIYARPL----------GNVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             HHhCCEEEEec----------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            9 999999764          2789999999999999999999998765

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=100.00  E-value=2.1e-34  Score=287.78  Aligned_cols=360  Identities=15%  Similarity=0.135  Sum_probs=262.9

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+++| .||++||||.++   ..+|++ ||++.+++.++++++.+...  .  ...++...+|+++|++..
T Consensus        23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~-~~~i~~a~~~~~~~~~~~~~--~--~~~~~~~~~la~~l~~~~   97 (425)
T PRK08088         23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHL-HPKVVAAVEAQLKKLSHTCF--Q--VLAYEPYLELCEKMNQKV   97 (425)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCC-CHHHHHHHHHHHhhCCCccc--c--ccCCHHHHHHHHHHHHhC
Confidence            37889999999999 599999999774   345664 89999999999998653211  1  113566779999999987


Q ss_pred             CC---CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCeE-------------EE--ec--CCC
Q psy15447        139 GL---EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCKV-------------QY--FK--HNN  195 (457)
Q Consensus       139 g~---~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~~-------------~~--~~--~~d  195 (457)
                      +.   +++++.+||++|++.|++.   +++++++|.+...+|+.+.....+++...             ..  ++  .++
T Consensus        98 ~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  177 (425)
T PRK08088         98 PGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG  177 (425)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC
Confidence            63   5788999999999999875   45678888899999999887776654210             11  11  111


Q ss_pred             ------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        196 ------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       196 ------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                            ++++++.++....      ++.+++|++||++++.|.+.+    +++|+++|++||+++|+||+|+.  +|++|
T Consensus       178 ~~~~~~~~~l~~~l~~~~~------~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g--~g~~g  249 (425)
T PRK08088        178 VSEDDAIASIERIFKNDAA------PEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTG--AGRTG  249 (425)
T ss_pred             ccHHHHHHHHHHHHHhccC------CCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--CCcCc
Confidence                  4567777752110      256889999999999888776    89999999999999999999873  45555


Q ss_pred             Cc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHH
Q psy15447        266 HG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLL  342 (457)
Q Consensus       266 ~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~  342 (457)
                      .+ ..+++++.|   ||  .||||++++  +.|++++++++++.+......  ++.+.+|+.++++.+.|+..+.. +..
T Consensus       250 ~~~~~~~~~~~p---di--~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~--~t~~~~~~~~~a~~~~l~~~~~~-~~~  321 (425)
T PRK08088        250 TLFAMEQMGVAA---DL--TTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLG--GTYAGNPIACAAALAVLKVFEQE-NLL  321 (425)
T ss_pred             chhHHhhcCCCC---CE--EEEeccccCCCcceeeEecHHHHhhcCCCCCC--CCCCcCHHHHHHHHHHHHHHHhc-CHH
Confidence            44 234566655   54  599999963  348899999999888654433  34446999999999999988654 478


Q ss_pred             HHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCC
Q psy15447        343 TKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ  420 (457)
Q Consensus       343 ~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~  420 (457)
                      +++++..+++++.|.++.. .+.+..+ .+.+.++++.+..+.+. .+......++.+.|.++||++.+...       .
T Consensus       322 ~~~~~~~~~~~~~l~~l~~~~~~~~~v-~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~-------~  393 (425)
T PRK08088        322 QKANALGEKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGP-------Y  393 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEEE-eccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCC-------C
Confidence            8888888888888876421 1222222 34488899988432110 11122567899999999988765321       1


Q ss_pred             CCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        421 KPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       421 ~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+.+|++|+..+|++||++.+++|++++...
T Consensus       394 ~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~  424 (425)
T PRK08088        394 YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA  424 (425)
T ss_pred             CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence            4789999999999999999999999988754

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=100.00  E-value=1.6e-34  Score=285.89  Aligned_cols=339  Identities=17%  Similarity=0.222  Sum_probs=253.3

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeec---CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFAT---HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s---~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|.++| .||++||||++   ++++|+ ++|.+.+++.+++.++...   ++.  ...+.+.+|++++++++
T Consensus         9 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~---~~~--~~~~~~~~l~~~la~~~   82 (379)
T TIGR00707         9 LPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGH-AHPKLVEALKEQLEKLVHV---SNL--YYTEPQEELAEKLVEHS   82 (379)
T ss_pred             CCccEEEeecCEEEeCCCCEEEEcCcchhhccCCC-CCHHHHHHHHHHHhhcccc---ccc--cCCHHHHHHHHHHHhhC
Confidence            57889999999999 59999999998   578887 5899999999999986432   111  24678999999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhh---cC----CCCEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAY---VK----RNDAVFV-DENINFAIQTGLIASR------------CKVQYFKHNNMQH  198 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~---~~----~gd~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~  198 (457)
                      |.+++++++||++|+..+++++   +.    ++|.|++ +..+|+....+....+            .....++++|+++
T Consensus        83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  162 (379)
T TIGR00707        83 GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIES  162 (379)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHH
Confidence            9999999999999999998865   23    2566555 4456665544433322            1234566789999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG  273 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~  273 (457)
                      +++.+.+           ++++|+++|+++++|... +   +++|.++|++||+++|+||+|+.  +|..|.+. ....+
T Consensus       163 l~~~~~~-----------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~--~~~~g~~~~~~~~~  229 (379)
T TIGR00707       163 LKKAIDD-----------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTG--IGRTGKFFAYEHYG  229 (379)
T ss_pred             HHHHhhh-----------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCccchhhhHHhcC
Confidence            9988753           346888899988888653 3   88999999999999999999962  34444433 23456


Q ss_pred             CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      +.|   |++  |+||+++.  +.|++++++++++.+........+  +.+++.++++.++|+.++. .+..+++++++++
T Consensus       230 ~~~---d~~--t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~aaL~~~~~-~~~~~~~~~~~~~  301 (379)
T TIGR00707       230 IEP---DII--TLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTF--GGNPLACAAALAVLEVIEK-ERLLENVKEKGDY  301 (379)
T ss_pred             CCC---CEE--EEcccccCCcccEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHH
Confidence            554   554  79999972  348999999999888654333344  3588999999999988764 3578899999999


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS  431 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~  431 (457)
                      +++.|++.....++.. .+..+.++++.++.+         ..++.+.|.++||.+.+..         .+++|++++..
T Consensus       302 ~~~~l~~~~~~~~~~~-~~~~g~~~~~~~~~~---------~~~~~~~l~~~Gv~v~~~~---------~~~lRi~~~~~  362 (379)
T TIGR00707       302 FKERLEELGKNYPNKE-VRGKGLMLGIELEAP---------CKDIVKKALEKGLLVNCAG---------PKVLRFLPPLI  362 (379)
T ss_pred             HHHHHHHHHhhCCCCc-cccCceEEEEEecCc---------HHHHHHHHHHCCcEEeeCC---------CCEEEEECCCc
Confidence            9998876321112211 123466777776542         3578889999999998643         37899999999


Q ss_pred             CCHHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCKS  447 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~  447 (457)
                      +|++++++++++|+++
T Consensus       363 ~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       363 ITKEEIDEAVSALEEA  378 (379)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999999999999875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=100.00  E-value=1.7e-33  Score=272.42  Aligned_cols=309  Identities=13%  Similarity=0.185  Sum_probs=234.8

Q ss_pred             CCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHHHHhhcCCCC
Q psy15447         88 HNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        88 ~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~ai~a~~~~gd  165 (457)
                      ++|||+.+||.++++..+.+++|+          |+.+.+.+|++++|+++|.  +.++++++|++|+..++.+++++||
T Consensus        27 ~~ylgl~~~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd   96 (346)
T TIGR03576        27 YDLTGLAGGFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGR   96 (346)
T ss_pred             cccccCCCChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCC
Confidence            589999999999999999999984          4579999999999999998  7899999999999999999999999


Q ss_pred             EEEE---eCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC---CChHHH
Q psy15447        166 AVFV---DENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI---CPLKDI  239 (457)
Q Consensus       166 ~v~~---~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i---~~l~~i  239 (457)
                      .|++   +.++|.++..++++.|+++.  .++++++++    ..         +++++|++++ .+++|.+   .+|++|
T Consensus        97 ~Vli~~~d~p~~~s~~~~~~l~ga~~~--~~~~l~~l~----~~---------~~~~lIiitg-~s~~G~v~~~~~L~~i  160 (346)
T TIGR03576        97 KVVHYLPEKPAHPSIPRSCKLAGAEYF--ESDELSELK----KI---------DGTSLVVITG-STMDLKVVSEEDLKRV  160 (346)
T ss_pred             EEEECCCCCCCchhHHHHHHHcCCEEe--ccCCHHHHh----hC---------cCceEEEEEC-CCCCCcccCHHHHHHH
Confidence            9885   46799999999999998763  345666532    11         2345666665 5789998   569999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecC
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSA  318 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~  318 (457)
                      .++|++||+++++||+|+.|..+..+.+....++     .|++++||||++ |..|||+++++++++.++....++.++ 
T Consensus       161 ~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~~s-  234 (346)
T TIGR03576       161 IKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFGLE-  234 (346)
T ss_pred             HHHHHHcCCEEEEECCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcccC-
Confidence            9999999999999999998876644444333333     378899999999 778999999999999998877777665 


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHH
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICD  398 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  398 (457)
                       .+++.++++.++|+.+.. +.+++.++++.+.+.+.+++    .+  +. ++...++++.+....       ......+
T Consensus       235 -~~~~~~~aa~~aL~~~~~-~~~~~~l~~r~~~~~~~l~~----~~--~~-~~~~~f~~~~~~~~~-------~~~~~~~  298 (346)
T TIGR03576       235 -AQAPLLAAVVRALEEFEL-SRIRDAFKRKEEVYLRLFDK----LN--VE-RTPTGFVIKGVEEEK-------LIEIGLD  298 (346)
T ss_pred             -ccHHHHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHh----CC--CC-cCCCeEEEEeCCCCC-------HHHHHHH
Confidence             467788888899876543 35678888888888887765    22  22 223446666664321       1233455


Q ss_pred             HHHHcCeeEeccccCccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHHHH
Q psy15447        399 MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH-TEQDMNSLIETLCKSH  448 (457)
Q Consensus       399 ~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~  448 (457)
                      .|.++||.+++...+    +..++++||++.... ++.++++++++|++.+
T Consensus       299 ll~~~gV~v~~~~~f----~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       299 LLRNYGIITITAVGM----PGASKTLRFDLAAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             HHHhCCEEEeCCccc----CCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence            666789999986431    123679999997311 1227999999998754

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=100.00  E-value=1.3e-32  Score=270.60  Aligned_cols=328  Identities=11%  Similarity=0.080  Sum_probs=244.0

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccCh-----HHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTN-----VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~-----~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      -.+.+++.+++++||.++++++...|+.     +...++++.+|+++|.+.++++++|++++..++.+++++||.|+++.
T Consensus        18 g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~   97 (370)
T TIGR02539        18 GVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDG   97 (370)
T ss_pred             CCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECC
Confidence            4588999999999999887776655543     46778888899999999999999999999999999999999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +.|.+.+.+++..|+++..++++       |++++++.+++....   . ..++++|+++++++++|.+.|+++|.++|+
T Consensus        98 ~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~lv~~~~p~~~~G~~~~l~~i~~la~  173 (370)
T TIGR02539        98 LAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDE---S-GKPPVLALLTHVDGEYGNLPDAGKVAKVCR  173 (370)
T ss_pred             cccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhc---c-CCCcEEEEEECCCCCCccccCHHHHHHHHH
Confidence            99999988899999999999886       899999988642210   0 024568889999999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCCcceecC----
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGSGYCFSA----  318 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~~~~~~~----  318 (457)
                      +||+++|+||+|++|.++..+.         ..++|++++|++|++|+.|  ||+++++++++.++....++.++.    
T Consensus       174 ~~~~~livDea~~~g~~~~~~~---------~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~  244 (370)
T TIGR02539       174 EKGVPLLLNCAYTVGRMPVSAK---------EIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELL  244 (370)
T ss_pred             HcCCeEEEECccccCCcCCCHH---------HcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeee
Confidence            9999999999999875443221         1235899999999998666  999999999998876554443321    


Q ss_pred             --CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe--ccCCCCeEEEEecCCcch-HHHHHHH
Q psy15447        319 --SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ--GHRDTPLKYLYLQKSDDE-VASKKLL  393 (457)
Q Consensus       319 --~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~-~~~~~~~  393 (457)
                        +.....++++.++++...+.-+...+..++.+++++.|++    .|+++.  .++.++++.+.++..... ..+....
T Consensus       245 ~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~  320 (370)
T TIGR02539       245 GCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELED----IGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRG  320 (370)
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCcEEEccCCCcCceEEEECCchhHHhhhhcccc
Confidence              1122234455556654322212233445556789999998    677753  245677777765421000 0001134


Q ss_pred             HHHHHHHHHcCee-EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        394 QTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       394 ~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+.+.|.++||. +++.         ..+++|+++. .+|++|+++++++|+++++++
T Consensus       321 ~~~~~~L~e~GI~~ir~~---------~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~~  369 (370)
T TIGR02539       321 YFLYEELKKRGIHGIRSG---------QTKYFKLSVY-GLTKEQVEYVVDSFEEIVEEY  369 (370)
T ss_pred             HHHHHHHHhCCCccccCC---------cceEEEEEec-CCCHHHHHHHHHHHHHHHHhc
Confidence            5689999999997 4421         1468999984 689999999999999987753

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=100.00  E-value=4.2e-33  Score=269.35  Aligned_cols=294  Identities=19%  Similarity=0.226  Sum_probs=219.6

Q ss_pred             eeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc--C
Q psy15447         66 VVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM--G  139 (457)
Q Consensus        66 ~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g  139 (457)
                      +|++++|.|+|+ ||++|+||.++   ..+|++ ||++.+++.+++.+....+.    ....++...+|.++|.+.+  +
T Consensus         1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~-~p~i~~ai~~~~~~~~~~~~----~~~~~~~~~~la~~L~~~~p~~   75 (339)
T PF00202_consen    1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHN-HPEIAEAIAEQANKLNYVSF----SGFTHPEAAELAEKLAELFPGG   75 (339)
T ss_dssp             EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT--HHHHHHHHHHHHHCSSCST----TTSEEHHHHHHHHHHHHHSSTT
T ss_pred             CeEEeecCEEEECCCCEEEECCCCccceecCCC-ccccchhHHHHhhhcccccc----cceeccchhhhhhhhhhccccc
Confidence            478999999995 99999999763   455664 89999999999998654321    1236788999999999999  5


Q ss_pred             CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447        140 LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQH  198 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~  198 (457)
                      .+++++.+||++|++.|++...         ++..++.....+|+.+...+.+++            ..+..+|.+++..
T Consensus        76 ~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~  155 (339)
T PF00202_consen   76 LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA  155 (339)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH
T ss_pred             cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch
Confidence            6688999999999999998655         566677788899998887777654            2346677777666


Q ss_pred             ----------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccC
Q psy15447        199 ----------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGS  263 (457)
Q Consensus       199 ----------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~  263 (457)
                                +++.+.+..       .+.+++||+||+++.+|.+.|    +++|+++|++||+++|+||+++ +|++|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~-------~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~  228 (339)
T PF00202_consen  156 DEEEQACLNALEELIAALN-------ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK  228 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-------GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS
T ss_pred             hhhHHHHHHHHHHHHHhhc-------CCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC
Confidence                      444443332       257899999999998887754    8999999999999999999985 545543


Q ss_pred             CCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447        264 TGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL  341 (457)
Q Consensus       264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~  341 (457)
                        .+..+++|+.|   ||+  +++|+++  .+.|++++++++.+.+....++.+|  +.+|+.|++++++|+.+++.+ +
T Consensus       229 --~~a~~~~gv~P---Div--~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~--~g~p~~~aaa~~~l~~~~~~~-~  298 (339)
T PF00202_consen  229 --FFASEHYGVDP---DIV--TFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTF--GGNPLSCAAALATLEILEEED-L  298 (339)
T ss_dssp             --SSGHHHHTSSS---SEE--EEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTT--TT-HHHHHHHHHHHHHHHHTT-H
T ss_pred             --ccceecccccC---ccc--ccccchhhhhhcccccccchhhcccccccccccc--ccchHhhhhhhhHHHhhccHH-H
Confidence              23458899988   787  7899995  3447789999998877554444444  459999999999999998764 7


Q ss_pred             HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        342 LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       342 ~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      .++++++.++|++.|+++....++....+..+.++.+.+.
T Consensus       299 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~  338 (339)
T PF00202_consen  299 LERVRELGERLREGLRELAARYPLIGEVRGIGLMIGIELV  338 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence            8999999999999998755331222222455777777654

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=100.00  E-value=7.4e-32  Score=267.93  Aligned_cols=336  Identities=14%  Similarity=0.137  Sum_probs=246.5

Q ss_pred             eeEE-eecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCCcEEE-ecccHHHH
Q psy15447         81 PCIN-FATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLEETAL-YSFGFSTS  153 (457)
Q Consensus        81 ~~id-~~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~i~-~~sG~~a~  153 (457)
                      +.|+ ++|+||+    ||++++++...+ .+|+.+++++|.+.| .+.+.+||+    ++++++|.+.+++ ++||+.|+
T Consensus        29 ~~~~l~~sen~~----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~  103 (416)
T PRK13034         29 DHLELIASENFT----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQAN  103 (416)
T ss_pred             cCeeecccccCC----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHH
Confidence            4455 5677885    899999999995 999999999999888 688999999    9999999999965 58999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHH-HHHHHHhc--CCeE--EEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFA-IQTGLIAS--RCKV--QYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~-~~~~~~~~--g~~~--~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ..++.+++++||.|+++...|++ ...+++..  +...  ..+++      .|++++++.++..          ++++|+
T Consensus       104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----------~~klVi  173 (416)
T PRK13034        104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH----------KPKLII  173 (416)
T ss_pred             HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc----------CCeEEE
Confidence            99999999999999999999987 34444432  2221  34544      6899999988642          236777


Q ss_pred             Ee-cCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec
Q psy15447        223 VE-GVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS  300 (457)
Q Consensus       223 ~e-~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~  300 (457)
                      ++ ++   .|...|+++|.++|++||++||+|++|++|.++. |.    ..+. ...+|++++|++|++ |+.||+++++
T Consensus       174 ~~~~~---~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~-g~----~~~~-~~~~Di~~~s~~K~l~g~~GG~v~~~  244 (416)
T PRK13034        174 AGFSA---YPRELDFARFREIADEVGALLMVDMAHIAGLVAA-GE----HPNP-FPHAHVVTTTTHKTLRGPRGGMILTN  244 (416)
T ss_pred             ECCCc---cccccCHHHHHHHHHHcCCEEEEeCcccccCccc-CC----CCCC-CCCceEEEEeCcccCCCCCCeEEEEC
Confidence            74 43   3677799999999999999999999999988763 21    1121 135799999999999 5678888776


Q ss_pred             HHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEE
Q psy15447        301 SYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKY  377 (457)
Q Consensus       301 ~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~  377 (457)
                      ++.+ +.++........+...++..++++++.++.++. .++++++++++.++|++.|++    .|+++..+ +.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~----~G~~~~~~~~~t~i~~  320 (416)
T PRK13034        245 DEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKE----RGYDLVSGGTDNHLLL  320 (416)
T ss_pred             cHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHH----cCCEeccCCCCCcEEE
Confidence            5443 434332111112223455555555555655533 245689999999999999998    58877532 5688988


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.+++...      ....+.+.|.++||++.....|.. ..+..+..+|++++.    .+|++|+++++++|++++..
T Consensus       321 v~~~~~~~------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~  392 (416)
T PRK13034        321 VDLRPKGL------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD  392 (416)
T ss_pred             EEcCCCCC------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            88876420      234566788889999986433321 112335789999888    88899999999999988764

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=100.00  E-value=3.2e-30  Score=255.00  Aligned_cols=351  Identities=13%  Similarity=0.115  Sum_probs=247.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      .++||+.--.-+|.. .+++.+|+.+....++..+. ..+...+..+.+.++++.+|+++|.+.++++++|++++..++.
T Consensus        18 ~~~~~~~~~~~~~p~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~   96 (387)
T PRK09331         18 EEFINLDPIQRGGIL-TPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMH   96 (387)
T ss_pred             ccccccChhhcCCCC-CHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHH
Confidence            345555433333332 56677777776644332111 2244455677899999999999999999999999999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +++++||.|+++...|.+.+.++...|.++..++.       .|++++++.+++....    ..+++++|+++++++++|
T Consensus        97 ~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~----~~~~~~lV~l~~~~~~tG  172 (387)
T PRK09331         97 SLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEE----TGKPPALALLTHVDGNYG  172 (387)
T ss_pred             HhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhc----cCCCCEEEEEECCCCCCc
Confidence            99999999999999999999889999999988876       4789999988753100    013567899999999999


Q ss_pred             CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHh
Q psy15447        232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRL  309 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~  309 (457)
                      .+.|+++|.++|++||+++|+|++|+.|.++..+.    .     .++|++++|++|+++++  +|++++++++++.++.
T Consensus       173 ~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~----~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~  243 (387)
T PRK09331        173 NLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK----K-----LGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR  243 (387)
T ss_pred             ccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH----H-----cCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence            99999999999999999999999999876543221    1     24589999999999753  4899999998888755


Q ss_pred             hCCcce------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEec
Q psy15447        310 SGSGYC------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQ  381 (457)
Q Consensus       310 ~~~~~~------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~  381 (457)
                      ...++.      ++++.++...++++++++.+.+..+.+++..++.+++++.|++   ++|+++...  ..++++.+..+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~---l~g~~~~~~~~~~~~i~~~~~~  320 (387)
T PRK09331        244 TSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEK---IEGFKQLGEKPRNHDLMKFETP  320 (387)
T ss_pred             ccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeccCcCcCCeEEEeCC
Confidence            433221      3334444445555666766554434566777888999999998   458887632  23555555433


Q ss_pred             CCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCCC
Q psy15447        382 KSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPLN  456 (457)
Q Consensus       382 ~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~~  456 (457)
                      .-... .........+.+.|.++||...+..         ...+|...+..+|++|+++++++|++++++...+.|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~---------~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~~~~~  387 (387)
T PRK09331        321 SFDEIAKKHKRRGFFLYEELKKRGIHGIKPG---------ATKEFKLSTYGLTWEQVEYVADAFKEIAEKYGLEVN  387 (387)
T ss_pred             chhHHhhhccccchhHHHHHHHcCceEEccC---------CceEEEEEeccCCHHHHHHHHHHHHHHHHhcCCCCC
Confidence            11000 0001123568999999999843221         234444444558999999999999999888766543

>KOG1403|consensus

Probab=99.98  E-value=2.9e-31  Score=235.13  Aligned_cols=363  Identities=12%  Similarity=0.133  Sum_probs=272.4

Q ss_pred             CCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh-hcC
Q psy15447         62 SSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS-FMG  139 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~-~~g  139 (457)
                      ..|+.|++++|.|+.+ +|++|+|..+|...+-..||++.+|..+|+....   +-.|+   .++...+.++.|.. +.+
T Consensus        28 sDP~kivRaq~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat~~---tN~RF---lhd~lv~cA~~l~stlPe  101 (452)
T KOG1403|consen   28 SDPLKIVRAQGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMATIS---TNNRF---LHDELVQCARTLTSTLPE  101 (452)
T ss_pred             CCchhhehhccceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhHhc---ccchh---hHHHHHHHHHHHhhcCCC
Confidence            3688999999999995 8999999998854444469999999999998743   33444   34555555555554 556


Q ss_pred             CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCC-----------e-EEEecCC----------
Q psy15447        140 LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRC-----------K-VQYFKHN----------  194 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~-----------~-~~~~~~~----------  194 (457)
                      .+-++|++||++||..|++.   +++..|.|..+..||+.....+.++.-           . +...|.+          
T Consensus       102 Lsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~  181 (452)
T KOG1403|consen  102 LSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDK  181 (452)
T ss_pred             ceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccc
Confidence            77889999999999999875   578899999999999876655444420           1 1111111          


Q ss_pred             -----C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCc-ccc
Q psy15447        195 -----N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESV-SFG  259 (457)
Q Consensus       195 -----d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~-~~g  259 (457)
                           |     .+.+++++++...     ....+++++.|+.++-+|.+.|    ++++.+..+.+|-+.|.||++ +||
T Consensus       182 ~~~~a~~~~~Yad~vk~I~~d~~~-----~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFG  256 (452)
T KOG1403|consen  182 MYPDADMGALYADPVKEICQDQLA-----KGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFG  256 (452)
T ss_pred             cCCcccchhhhhhHHHHHHHHHHh-----cCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccc
Confidence                 1     2456666655432     1356778999999999998876    789999999999999999997 788


Q ss_pred             cccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447        260 TLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA  337 (457)
Q Consensus       260 ~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~  337 (457)
                      +.|+.. |..+.++.-|   ||+  |++|.+|  .+-+.|+..+++.+.+...+-.|..+.+.+|++||++++.++..+.
T Consensus       257 RvG~hy-Wafq~y~fiP---DIV--tmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~  330 (452)
T KOG1403|consen  257 RVGSHY-WAFQTYNFIP---DIV--TMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED  330 (452)
T ss_pred             ccchhh-hhhhhhcccc---chh--eecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh
Confidence            887643 3456677767   777  8999996  3457899999999988765555555556799999999999998875


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHc-CeeEeccccC
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQA-GFAITCPSHL  413 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~-Gi~v~~~~~~  413 (457)
                      + .+.++.++.+++|...|++++  ...++.++  +.+.++.+.+..+... .++.+.+..+..+|.+. ||+++.-+  
T Consensus       331 E-~Lq~ha~~vG~~L~~lL~~~k--~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG--  405 (452)
T KOG1403|consen  331 E-NLQEHAQQVGEKLEVLLRRLK--QKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG--  405 (452)
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHh--hhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCC--
Confidence            4 488888888888888887644  34455554  3466777776655433 55566777888888886 79887543  


Q ss_pred             ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                           +..|.+.|-||.+.++++.++++..|++++...
T Consensus       406 -----Ph~NilKiKPPmCFneena~e~v~~ld~iLT~m  438 (452)
T KOG1403|consen  406 -----PHRNILKIKPPMCFNEENADEFVLGLDEILTVM  438 (452)
T ss_pred             -----CCCceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence                 457999999999999999999999999988644

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.97  E-value=5e-29  Score=244.48  Aligned_cols=339  Identities=17%  Similarity=0.171  Sum_probs=255.6

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~~  154 (457)
                      ..+||++.+++ ++..++.+++++.+++..-+..+  + ...|..++++.+++.+.+..|    .+. +++++++++|+.
T Consensus        28 ~~vi~l~iG~P-d~~~p~~i~~a~~~a~~~~~~~Y--~-~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~  103 (393)
T COG0436          28 EDVIDLSIGEP-DFPTPEHIIEAAIEALEEGGTHY--T-PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF  103 (393)
T ss_pred             CCEEEeCCCCC-CCCCCHHHHHHHHHHHhcccCCC--C-CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence            46899988776 66667789999999998733211  1 345777888888888887776    224 667777779999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C----CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      .++.++..+||.|++..++|..+...+.+.|++++.++.    +    |++.+++.+.+           ++++|+++++
T Consensus       104 ~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-----------ktk~i~ln~P  172 (393)
T COG0436         104 LAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-----------KTKAIILNSP  172 (393)
T ss_pred             HHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-----------cceEEEEeCC
Confidence            999999999999999999999999999999999888763    1    57888887753           5689999999


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||||.+.+   +++|+++|++||++||.||+|....+... ...+.+..+.  .+..|.+.||||.++++|   ||+++
T Consensus       173 ~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~--~~~~i~i~s~SK~~~mtGwRvG~~v~  250 (393)
T COG0436         173 NNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGA--RDRTITINSFSKTYGMTGWRIGWVVG  250 (393)
T ss_pred             CCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCC--cceEEEEecccccccccccceeEeec
Confidence            999999988   78999999999999999999986666431 2222222221  234588999999998776   99999


Q ss_pred             c-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCC
Q psy15447        300 S-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTP  374 (457)
Q Consensus       300 ~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~  374 (457)
                      + +++++.+.... .+... +.+.+...++.++|+.-+.   ....++.++++++.+.+.|.+   ..|+.+.. +.+++
T Consensus       251 ~~~~l~~~~~~~~-~~~~~-~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~---~~g~~~~~~p~Ga~  325 (393)
T COG0436         251 PPEELIAALRKLK-SYLTS-CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNE---IGGLSVVKPPEGAF  325 (393)
T ss_pred             ChHHHHHHHHHHH-Hhccc-CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHh---cCCeeeccCCCeeE
Confidence            8 87887776332 12222 3477777888888764422   123456788999999999998   56788876 34566


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .++..+....       +..+++++|+++ ||.+.|+..+..  ..+.+++|+++..  ++++++++++.+.+.++..
T Consensus       326 Y~~~~i~~~~-------d~~~f~~~Ll~~~gV~v~PG~~Fg~--~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~  392 (393)
T COG0436         326 YLFPKIPELL-------DSEEFAKKLLEEAGVAVVPGSGFGE--PPGEGYVRLSLAT--SEETLEEALRRLARFLAEY  392 (393)
T ss_pred             EEEeecCCCC-------CHHHHHHHHHHhCCEEEecccccCC--CCCCCeEEEEEec--CHHHHHHHHHHHHHHHHhc
Confidence            7777776533       456899988876 899999887532  2356899999875  5699999999999887653

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.97  E-value=1.1e-29  Score=250.07  Aligned_cols=333  Identities=20%  Similarity=0.225  Sum_probs=243.3

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecccHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFGFST  152 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a  152 (457)
                      ++|||++|++....++|.+.+++.+..+  +.........|+......+|++.++++++        .+..+++++|+.+
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~   79 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA   79 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence            5799999999888777766666666554  11111223345556667899999999887        3436777777755


Q ss_pred             -HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCC-ccEEEE
Q psy15447        153 -SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKV-TKKFII  222 (457)
Q Consensus       153 -~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~-~~~~vi  222 (457)
                       +..+...+ .++||.|+++.++|..+...++..|.+++.++       +.|+++|++.+++...+      . ++.+|+
T Consensus        80 ~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~------~~~~~~v~  153 (363)
T PF00155_consen   80 ALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSK------GPRPKAVL  153 (363)
T ss_dssp             HHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTT------TETEEEEE
T ss_pred             chhhhhhcccccccccceecCCccccccccccccCceeeecccccccccccccccccccccccccc------ccccceee
Confidence             44445556 57999999999999999999999999999888       66999999999875421      2 457888


Q ss_pred             EecCCCCCCCCCChHHHH---HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        223 VEGVYMNSADICPLKDIL---SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~---~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      +++++||+|...+.+++.   ++|++||+++|+||+|+...++..+.... ...+......|++.|+||++|.+|   ||
T Consensus       154 ~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRvG~  232 (363)
T PF00155_consen  154 ICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGLRVGY  232 (363)
T ss_dssp             EESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGGTEEE
T ss_pred             ecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccccccccccc
Confidence            999999999999865554   55999999999999999887765422110 111211111589999999999888   99


Q ss_pred             EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh----hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC
Q psy15447        297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK----ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD  372 (457)
Q Consensus       297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~  372 (457)
                      +++++++++.++.....+..    +.+..+++.+.+....    ...+++++++++.+++.+.|++    .++.+..+..
T Consensus       233 i~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~----~~~~~~~~~~  304 (363)
T PF00155_consen  233 IVAPPELIERLRRFQRSGLS----SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE----IGITVLPPEA  304 (363)
T ss_dssp             EEEEHHHHHHHHHHHHHTTS----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTSEEEHHSB
T ss_pred             ccchhhhhhhhhhccccccc----cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH----hhhheeeccC
Confidence            99999999988765433222    4444444444443322    2345788899999999999988    5888876666


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      +.++++.+...        +..++++.|+++ ||.+.++.++.     .++++|+++ ..++++++++++++|
T Consensus       305 ~~~~~~~~~~~--------~~~~l~~~L~~~~gi~v~pg~~~~-----~~~~iRi~~-a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  305 GFFLWVRLDPN--------DAEELAQELLEEYGILVRPGSYFG-----VPGYIRISL-ASHSEEDLEEALERL  363 (363)
T ss_dssp             SSEEEEEESHH--------HHHHHHHHHHHHHTEEEEEGGGGT-----STTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred             ccEEEEEcccc--------hHHHHHHHHHHhCCEEEEecCCCC-----CCCEEEEEe-ccCCHHHHHHHHhhC
Confidence            66666655532        456899999998 99999987753     278999999 778999999999876

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.97  E-value=5.6e-28  Score=239.46  Aligned_cols=336  Identities=13%  Similarity=0.115  Sum_probs=240.0

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~a  156 (457)
                      .+++|..+.+ .+...+.+.+++.+.+.....   .+....|..++...+++.+.+.+|    .+++++++++++++..+
T Consensus        25 ~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~  100 (382)
T PRK06108         25 GVLPLWFGES-DLPTPDFIRDAAAAALADGET---FYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA  100 (382)
T ss_pred             CeEEecCCCC-CCCCCHHHHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence            5788887654 354568899999888765211   122334566777777777776666    34567777788999999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      +.+++++||.|++..++|..+...++..|.++..++.+        |++++++.+.           .+++++++++++|
T Consensus       101 ~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~l~~p~N  169 (382)
T PRK06108        101 AQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-----------PRTRALFINSPNN  169 (382)
T ss_pred             HHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-----------ccceEEEEECCCC
Confidence            99999999999999999998888888889988877653        5677776663           2356777788999


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEecH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      |+|.+.+   +++|.++|++||+++|+||+|+...++..+. ......+. +.+..++++||||.+|.+|   ||+++++
T Consensus       170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~  248 (382)
T PRK06108        170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGR-APSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP  248 (382)
T ss_pred             CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCC-CCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH
Confidence            9999887   6789999999999999999998765541111 11111221 2234588999999998666   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.+.... .+. +.+.+++.+.++.++++.-.+ .++.+++++++.+++.+.|++   .+++.+..+..+.++++.+
T Consensus       249 ~~~~~~~~~~-~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~~g~~~~~~l  323 (382)
T PRK06108        249 ALGQVLEKLI-EYN-TSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRA---LPGVEVAKPDGAMYAFFRI  323 (382)
T ss_pred             HHHHHHHHHH-Hhc-ccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh---CCCCcccCCCeeEEEEEeC
Confidence            9988876432 111 223466666666666643211 134677888888999999987   4577765444566677777


Q ss_pred             cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +...       ...+++++|+ ++||.+.++..+.   +...+++|++++.  ++++++++++.|+++++
T Consensus       324 ~~~~-------~~~~~~~~ll~~~gV~v~pg~~f~---~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        324 PGVT-------DSLALAKRLVDEAGLGLAPGTAFG---PGGEGFLRWCFAR--DPARLDEAVERLRRFLA  381 (382)
T ss_pred             CCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence            6543       3457888886 4699998865421   1235799999987  89999999999988764

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.97  E-value=4e-28  Score=243.03  Aligned_cols=336  Identities=14%  Similarity=0.107  Sum_probs=244.3

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCC-cEEEe----cc
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLE-ETALY----SF  148 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~-~~i~~----~s  148 (457)
                      ++.|++. |-|+    -+|.+.++....+ .+|+.++.+.|...|+. .+.++|+    +..+.++.+ ..+.+    +|
T Consensus        34 ~~~l~liasen~----~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~S  108 (475)
T PLN03226         34 WKGLELIASENF----TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPLS  108 (475)
T ss_pred             HcCeeEecCCcc----CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcCc
Confidence            3455653 4344    2588999999999 89999999999887775 7788876    344445544 44444    89


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeC------cccHHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHhhchhccc
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDE------NINFAIQTGLIASRCKVQ----YFKHN------NMQHLEELLRQQDERDTL  212 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~------~~h~~~~~~~~~~g~~~~----~~~~~------d~~~le~~l~~~~~~~~~  212 (457)
                      |+.||..++.+++++||.|+.++      ..|++...+.+++.....    .|+++      |++++++.+++.      
T Consensus       109 G~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~------  182 (475)
T PLN03226        109 GSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF------  182 (475)
T ss_pred             hHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc------
Confidence            99999999999999999999854      446666666665555433    66667      999999998752      


Q ss_pred             CCCCccEEEEE-ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-
Q psy15447        213 NSKVTKKFIIV-EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-  290 (457)
Q Consensus       213 ~~~~~~~~vi~-e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-  290 (457)
                          ++++|++ ++++   |...|+++|+++|++||++|++|++|++|.++..+..  ..    .+.+|++++|++|+| 
T Consensus       183 ----~pklIv~~~S~~---s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p----~~~~Div~~t~hK~L~  249 (475)
T PLN03226        183 ----RPKLIIAGASAY---PRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA--SP----FEYCDVVTTTTHKSLR  249 (475)
T ss_pred             ----CCeEEEEecCcC---CCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CC----CCCCeEEEecCccccc
Confidence                2344444 5544   5677899999999999999999999999988764422  11    135799999999999 


Q ss_pred             cCcccEEEecHHHH-----------HH--HHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHH
Q psy15447        291 GSVGGFCVGSSYII-----------EH--HRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSL  355 (457)
Q Consensus       291 g~~gG~v~~~~~~~-----------~~--~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~  355 (457)
                      |+.||++++++...           +.  ..+......+++++++..+++..++++.+.+.  ++.++++.+++++|++.
T Consensus       250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~  329 (475)
T PLN03226        250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANR  329 (475)
T ss_pred             CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence            78899999887544           33  22223334566677777778888889988654  34789999999999999


Q ss_pred             hhcccccCCeEEecc-CCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE----Eec
Q psy15447        356 LSQHKVTQRFLVQGH-RDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI----TCN  429 (457)
Q Consensus       356 L~~~~~~~~~~~~~~-~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi----~~~  429 (457)
                      |++    .|+.+... ..++++.+.+.. ..       ...++.+.|.+.||.+....-|....+..++.+|+    ..+
T Consensus       330 L~~----~G~~l~~~~t~~hi~lv~~~~~gi-------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~  398 (475)
T PLN03226        330 LMS----KGYKLVTGGTDNHLVLWDLRPLGL-------TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTS  398 (475)
T ss_pred             HHh----CCCEEEcCCCCCCEEEEEccCCCC-------CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHH
Confidence            998    78888653 336777776632 22       33467778888999987654332211223467998    567


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..++++|++++.+.|.++++.
T Consensus       399 ~g~~~~d~~~ia~~i~~~~~~  419 (475)
T PLN03226        399 RGLVEKDFEKVAEFLHRAVTI  419 (475)
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            788999999999999999874

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.97  E-value=2.3e-27  Score=235.99  Aligned_cols=342  Identities=15%  Similarity=0.131  Sum_probs=239.5

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~  154 (457)
                      ++.+||..+++--+..+|.+.+++.+.+.+.+.  .++....|..++...+++.++++.|.     +++++++++++++.
T Consensus        39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~  116 (405)
T PRK06207         39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGV--QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF  116 (405)
T ss_pred             CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCC--ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence            567788765442234467888888888765322  12333456777888888888887773     45666667778999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      .++.+++++||.|++..++|......+...|.++..++.          .|++++++.+++           ++++|++.
T Consensus       117 ~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-----------~~k~v~l~  185 (405)
T PRK06207        117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-----------GVRVFLFS  185 (405)
T ss_pred             HHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-----------cCeEEEEC
Confidence            999999999999999999999988888888988876653          267888877753           34677788


Q ss_pred             cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +++||+|.+.+   +++|.++|++||+++|+||+|+...+..........+...+++ .|+++||||++|.+|   ||++
T Consensus       186 ~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~lpGlRiG~ii  264 (405)
T PRK06207        186 NPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPEN-VITIMGPSKTESLSGYRLGVAF  264 (405)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCc-EEEEecchhhccCcccceEEEE
Confidence            88999999998   6788899999999999999998654421111111111222333 489999999997555   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++++.+......+..  +.+.+..+++.+.++.- ....+.+++++++.+.+.+.|++   ..++.+..+..+.++|
T Consensus       265 ~~~~l~~~~~~~~~~~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~~p~gg~fl~  339 (405)
T PRK06207        265 GSPAIIDRMEKLQAIVSL--RAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG---VEGVFVRAPQAGSYLF  339 (405)
T ss_pred             cCHHHHHHHHHHHhHhcc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCeeEEEE
Confidence            999998888654332222  23444555555554321 00123456667777888888877   4567765455678888


Q ss_pred             EEecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        378 LYLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       378 i~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.++. ..       ...++++.|+ ++||.+.++..+.   ....+++||++..  +++++++.++.|.+++++.+
T Consensus       340 ~~l~~~~~-------~~~~~~~~l~~~~gV~v~pG~~F~---~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~~  404 (405)
T PRK06207        340 PRLPRLAV-------SLHDFVKILRLQAGVIVTPGTEFS---PHTADSIRLNFSQ--DHAAAVAAAERIAQLIERYR  404 (405)
T ss_pred             EeCcccCC-------CHHHHHHHHHHhcCEEEeCchHhC---CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence            88864 22       3456888887 6799999876432   1235799999974  78999999999999887653

>PLN00175 aminotransferase family protein; Provisional

Probab=99.97  E-value=1.6e-27  Score=237.46  Aligned_cols=340  Identities=17%  Similarity=0.148  Sum_probs=237.8

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~  153 (457)
                      +..++||..+.+ ++...+.+.+++.+.+++ +.  ..+....|..++...+++.+.+..|.    + .+++++++++|+
T Consensus        53 ~~~~i~l~~G~P-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al  128 (413)
T PLN00175         53 KHGAINLGQGFP-NFDGPDFVKEAAIQAIRD-GK--NQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI  128 (413)
T ss_pred             cCCeEecCCCCC-CCCCCHHHHHHHHHHHhc-CC--CCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence            346899988765 455567889999888875 21  11222345556666666666555452    2 345555667899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++.+++++||.|++..+.|..+...++..|.++..++.      .|++++++.+..           ++++|++++++
T Consensus       129 ~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~-----------~~k~i~i~~p~  197 (413)
T PLN00175        129 AATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS-----------KTRAILINTPH  197 (413)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc-----------CceEEEecCCC
Confidence            9999999999999999999999998889999998887753      256777776632           45778888999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|....++.....+....+.  .+..|+++||||.+|.+|   ||+++++
T Consensus       198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~RiG~~v~~~  275 (413)
T PLN00175        198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWKIGWAIAPP  275 (413)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC--cCcEEEEecchhhccCcchheeeeEeCH
Confidence            99999987   678899999999999999999876554322222222222  233689999999998777   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.+........++  .+++...++.++|+..+. .++.++.++++.+.+.+.|++    .|+.+..+.++.++|+.+
T Consensus       276 ~l~~~l~~~~~~~~~~--~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g~~f~~~~~  349 (413)
T PLN00175        276 HLTWGVRQAHSFLTFA--TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE----VGFKVYPSSGTYFVMVDH  349 (413)
T ss_pred             HHHHHHHHHHhhccCC--CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeEEEEEec
Confidence            9988886543222233  355555666566642211 134677888899999999988    577776555566677776


Q ss_pred             cC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        381 QK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       381 ~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .. ...      ...+++++|+ ++||.+.|+..+........+++||+++.  +++++++.++.|+++++
T Consensus       350 ~~~~~~------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        350 TPFGFE------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAVERMKTKLK  412 (413)
T ss_pred             cccCCC------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence            32 110      2357888887 46999988754321111235799999973  79999999999988765

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.97  E-value=1.3e-27  Score=235.49  Aligned_cols=325  Identities=13%  Similarity=0.097  Sum_probs=234.5

Q ss_pred             CCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHH
Q psy15447         78 NGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSA  154 (457)
Q Consensus        78 ~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~  154 (457)
                      ++++++||+++ ++++  .+|.+.+++.+.+..+.. +       +. ....+|++.+|++++.+ +.+++++|+ +++.
T Consensus        30 ~~~~~i~l~~~~~~~~--~~~~~~~a~~~~~~~~~~-y-------~~-~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~   98 (367)
T PRK02731         30 GIADIIKLASNENPLG--PSPKAIEAIRAAADELHR-Y-------PD-GSGFELKAALAEKFGVDPERIILGNGSDEILE   98 (367)
T ss_pred             CCCceEEecCCCCCCC--CCHHHHHHHHHHHHhhcC-C-------CC-CcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence            57889999987 4555  468899999888765321 1       11 11368999999999865 345555555 6677


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      .++.+++++||.|+++.+.|..+.......|.++..++.+    |++++++.+..           ++++|++++++||+
T Consensus        99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~npt  167 (367)
T PRK02731         99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP-----------RTRLVFIANPNNPT  167 (367)
T ss_pred             HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCC-----------CCcEEEEeCCCCCC
Confidence            7778888999999999999887776677889888887643    67888777642           34677788999999


Q ss_pred             CCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        231 ADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      |.+.|.+++.++|+.+  |+++|+||+|....++..........+..  +..++++|+||.+|.+|   ||+++++++++
T Consensus       168 G~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~  245 (367)
T PRK02731        168 GTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKF--PNVVVTRTFSKAYGLAGLRVGYGIAPPEIID  245 (367)
T ss_pred             CcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhc--CCEEEEeeehHhhcCcccceeeeeCCHHHHH
Confidence            9999999999999875  99999999987654432111111222221  22588999999998666   99999999998


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .+......  +  ..+++...++.+.++..+..++.++.++++.+.+.+.|++    .|+.+. ++.++++++.++... 
T Consensus       246 ~l~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~g~~~~i~~~~~~-  315 (367)
T PRK02731        246 ALNRVRQP--F--NVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE----LGLEYI-PSVGNFILVDFDDGK-  315 (367)
T ss_pred             HHHHccCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCCceEEEEECCCCC-
Confidence            88754332  2  2356666666666542221234566777788888888888    466654 456888898885443 


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                            ...++++.|.++||.+++...+     ..++++|++++   +.+|+++++++|+++++.
T Consensus       316 ------~~~~~~~~L~~~gI~v~~~~~~-----~~~~~iRis~~---~~~e~~~l~~aL~~~~~~  366 (367)
T PRK02731        316 ------DAAEAYQALLKRGVIVRPVAGY-----GLPNALRITIG---TEEENRRFLAALKEFLAA  366 (367)
T ss_pred             ------CHHHHHHHHHHCCEEEEeCCCC-----CCCCeEEEecC---CHHHHHHHHHHHHHHHhc
Confidence                  4568899999999999886542     22478999985   789999999999988653

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.97  E-value=7.2e-28  Score=236.60  Aligned_cols=339  Identities=14%  Similarity=0.132  Sum_probs=238.6

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcE-EEecccHHH
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEET-ALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~a  152 (457)
                      +..|++. |-|+    -+|.+.++....+. +|..++.+.|.+.|. +...++    .++..++||.+.+ +-..||+.|
T Consensus        49 ~~~l~LiasEN~----~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~-~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~A  123 (493)
T PRK13580         49 RSSLKLIASENY----SSLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDTVEWEAAEHAKELFGAEHAYVQPHSGADA  123 (493)
T ss_pred             hcCceEeccccc----CCHHHHHHhcccccccCcCCCCCccccCCC-chHHHHHHHHHHHHHHHhCCCcccccCCCcHHH
Confidence            3455553 3333    25778777766664 576677666665443 333333    3344457888866 556799999


Q ss_pred             HHHHHHhhcCC-------------------------------CCEEEEeCcccHHHH---HHHHhcC--CeEEEecC---
Q psy15447        153 SASAIAAYVKR-------------------------------NDAVFVDENINFAIQ---TGLIASR--CKVQYFKH---  193 (457)
Q Consensus       153 ~~~ai~a~~~~-------------------------------gd~v~~~~~~h~~~~---~~~~~~g--~~~~~~~~---  193 (457)
                      |..++.++.++                               ||.|+.-...|+...   ......+  .....++.   
T Consensus       124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~  203 (493)
T PRK13580        124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD  203 (493)
T ss_pred             HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence            99999999876                               788887544432211   1112222  22222322   


Q ss_pred             ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                         .|++++++.+.+.           +..|++.+..+. +...|+++|+++|++||++|++|++|++|.+|  +.+..+
T Consensus       204 ~g~iD~d~l~~~~~~~-----------~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~~~~  269 (493)
T PRK13580        204 TGLLDYDEIAALAREF-----------KPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKVFTG  269 (493)
T ss_pred             cCccCHHHHHHHHhhc-----------CCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--cccchh
Confidence               3788999888652           235555566655 55779999999999999999999999999987  233222


Q ss_pred             ccCCCCCCccEEEecCcccc-cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREK  348 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~  348 (457)
                      .++.. .++|++++|+||++ |+.||++++++++++.+. .+.++.+++..+|..++++.+..+..... .+.++++++|
T Consensus       270 ~~~~~-~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~-~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~N  347 (493)
T PRK13580        270 DEDPV-PHADIVTTTTHKTLRGPRGGLVLAKKEYADAVD-KGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDN  347 (493)
T ss_pred             hcCCC-CCCcEEEeCChhhccCCCeEEEEecHHHHHHHh-hCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence            22222 36799999999999 778999999999999885 44578899888886666666544433222 4578999999


Q ss_pred             HHHHHHHhhcccccCCeEEec-cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCC---CCeE
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQG-HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ---KPSI  424 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~---~~~l  424 (457)
                      +++|++.|.+    .|+++.. ...++++++.+++..      .....+.+.|.++||++....+|.+  +.+   ...|
T Consensus       348 a~~La~~L~~----~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~Ptv--p~g~~~~srL  415 (493)
T PRK13580        348 ARALAEGFLK----RGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIPSD--PNGAWYTSGI  415 (493)
T ss_pred             HHHHHHHHHh----cCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCCCC--CCCCCCCceE
Confidence            9999999998    7887753 356899999987643      1233677789999999999888876  433   6789


Q ss_pred             EEEecC----CCCHHHHHHHHHHHHHHHHHh
Q psy15447        425 RITCNI----SHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       425 Ri~~~~----~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ||+++.    .++++||+++++.|.++++..
T Consensus       416 RIg~~A~ttrg~teedi~~iad~l~~~l~~~  446 (493)
T PRK13580        416 RLGTPALTTLGMGSDEMDEVAELIVKVLSNT  446 (493)
T ss_pred             EeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence            999988    667999999999999888754

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.97  E-value=1.7e-27  Score=233.92  Aligned_cols=327  Identities=12%  Similarity=0.111  Sum_probs=229.2

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcc-----cChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFY-----GTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~-----g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      ..+.+++.+++.+||.++++++...     ...+...++++++++++|.+.++++++|++++..++.+++++||.|+++.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~   90 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDG   90 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Confidence            4577788888888887666665422     23467899999999999998888888888999999999999999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +.|.+....+...|.++..++.       .|++++++.+++....   . ..++++|++++++|++|.+.|+++|.++|+
T Consensus        91 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~  166 (361)
T cd06452          91 LAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDE---F-GKPPALALLTHVDGNYGNLHDAKKIAKVCH  166 (361)
T ss_pred             CcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhc---c-CCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence            9999988888888988887653       3688898888642210   0 024678888899999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc------ee
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY------CF  316 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~------~~  316 (457)
                      +||+++|+||+|++|.+...+    ..     .++|++++|++|++++  ++|++++++++++.++.....+      ..
T Consensus       167 ~~~~~vivD~a~~~g~~~~~~----~~-----~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~  237 (361)
T cd06452         167 EYGVPLLLNGAYTVGRMPVSG----KE-----LGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELL  237 (361)
T ss_pred             HcCCeEEEECCcccCCcCCCH----HH-----cCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeee
Confidence            999999999999876442211    11     2358999999999964  3489999999888875433221      11


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCcchH-HHHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSDDEV-ASKKLL  393 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~-~~~~~~  393 (457)
                      +++.++..++++.++++.+.+.-+...+..++.+++.+.|++   ++|+.+..  +...+++.+....-.... ......
T Consensus       238 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~---l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~  314 (361)
T cd06452         238 GCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEK---IEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRG  314 (361)
T ss_pred             ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEECCCCCCCceEEEEcCCcchhhhhccccc
Confidence            222233334444555654433222334445566899999988   45887753  234556655543110000 000023


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++.++|+++||++...        ....++|++. ..+|++|++.++++|+++.
T Consensus       315 ~~~~~~L~~~gI~~~~~--------~~~~~~ri~~-~g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         315 YFLYSELKKRGIHGIKP--------GLTRYFKLST-YGLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             hhHHHHHHHcCceEEcC--------CCceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence            36899999999985321        2245789988 3379999999999998754

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.97  E-value=2.6e-27  Score=235.58  Aligned_cols=334  Identities=14%  Similarity=0.126  Sum_probs=233.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C-CcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L-EETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~-~~~i~~~sG~~a~  153 (457)
                      |.+++||+.+++ .+...+.+.+++.+.+.+...  .++. ..|..++.+.+++.+.+..|    . +.+++++++++++
T Consensus        31 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~--~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al  106 (399)
T PRK07681         31 GHKMIDLSIGNP-DMPPADFVREEMVHTANQKES--YGYT-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL  106 (399)
T ss_pred             CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcccc--CCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence            567899988764 345568888888887764221  1111 13555555555555554434    2 3455556666899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..+...+...|.++..++.+       |++++++.+.           .++++|++.++
T Consensus       107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~v~l~~P  175 (399)
T PRK07681        107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-----------DKAKMMILNFP  175 (399)
T ss_pred             HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-----------ccceEEEEeCC
Confidence            99999999999999999999999988889999998887643       5666666553           24567777788


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||+|.+.+   +++|.++|++||+++|+||+|+...+..  ........+.. .+..|+++||||.+|.+|   ||+++
T Consensus       176 ~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~  253 (399)
T PRK07681        176 GNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG  253 (399)
T ss_pred             CCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCC--CCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence            999999999   7788999999999999999998655432  11111112211 133588999999998766   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.+........++  .+.+...++.+.++.- +..++.++.++++.+.+.+.|++    .|+.+..+.++.++|+
T Consensus       254 ~~~l~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~~g~f~~~  327 (399)
T PRK07681        254 NEEIVRALTQFKSNTDYG--VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGWNVDKPAGSMFVWA  327 (399)
T ss_pred             CHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeeEEEE
Confidence            999998886543222232  3455555555555321 11134566778888899999988    4776654566888888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      .++...       ...+++++|++ +||.+.++..+.   ....+++|+++.  .+++++++++++|+++
T Consensus       328 ~l~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~--~~~~~~~~~l~~l~~~  385 (399)
T PRK07681        328 EIPKGW-------TSLSFAYALMDRANVVVTPGHAFG---PHGEGFVRIALV--QDEEVLQQAVENIRNS  385 (399)
T ss_pred             ECCCCC-------CHHHHHHHHHHhCCEEEeCChhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence            887543       34578888887 799999875431   122478999997  4789999999999884

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.97  E-value=2.8e-27  Score=235.13  Aligned_cols=345  Identities=11%  Similarity=0.100  Sum_probs=233.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEeccc-HH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFG-FS  151 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG-~~  151 (457)
                      .|++++|++++.+ .+...|.+.+++.+.+.....  .++.. .|..++...+++.+.+..|.     +..+++++| .+
T Consensus        42 ~~~~~i~L~~g~p-~~~~~~~~~~~l~~~~~~~~~--~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~  117 (410)
T PRK06290         42 PDMELIDMGVGEP-DEMADESVVEVLCEEAKKPEN--RGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP  117 (410)
T ss_pred             CCCCeEEcCCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence            3677899998764 444567788888776643211  11221 35555555555555544453     224555555 48


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      ++..++.+++++||.|++..+.|..+...++..|.++..++..       |++++++.+..           ++++|++.
T Consensus       118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~-----------~~k~i~l~  186 (410)
T PRK06290        118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE-----------KAKLLYLN  186 (410)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc-----------cceEEEEE
Confidence            8888999999999999999999988888888899988877642       56667666532           45677777


Q ss_pred             cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +++||||.+.+   +++|.++|++||++||+||+|+...++.....+....+.  .+.+|+++||||.+|.+|   ||++
T Consensus       187 nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~--~~~~I~i~SfSK~~g~~GlRiG~ii  264 (410)
T PRK06290        187 YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA--KEVGVEIHSLSKAYNMTGWRLAFVV  264 (410)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCc--cccEEEEeechhhcCCchhheEeEE
Confidence            88999999999   678888999999999999999865553211122221111  234699999999998777   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      +++++++.+......+..  +.+.+...++.++++..+..+..+++++++.+++.+.|++    .|+.+..+..+.++|+
T Consensus       265 ~~~~l~~~l~~~~~~~~~--~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g~f~l~v  338 (410)
T PRK06290        265 GNELIVKAFATVKDNNDS--GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFKAEMPGGTFYLYV  338 (410)
T ss_pred             eCHHHHHHHHHHHhcccc--CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCeeeEEEE
Confidence            999999888654433222  2233444555555532111234677888899999999988    4777654455666677


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCe-eEeccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGF-AITCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi-~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++.............+++++|+++|+ .+.++..       .++++||+++ ...++++.++++++|++.+..+.
T Consensus       339 ~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~-------~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~  407 (410)
T PRK06290        339 KAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDD-------AGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE  407 (410)
T ss_pred             ECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcc-------ccCeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence            776431000000034579999998864 4444331       1368999985 45688999999999999988765

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.97  E-value=4.9e-27  Score=233.80  Aligned_cols=338  Identities=14%  Similarity=0.123  Sum_probs=239.0

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~  153 (457)
                      +.-|+|.++..   . ..+.+.+++.+.+..+...+.  .+....-..+..+++++.+++++|.+   .+++++++++++
T Consensus        16 ~~iyld~a~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l   91 (398)
T TIGR03392        16 GTVYLDSAATA---L-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESI   91 (398)
T ss_pred             CeEEeeCcccc---C-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHH
Confidence            35677777653   2 247789999888865422111  11010112345678999999999963   456667777898


Q ss_pred             HHHHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        154 ASAIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       154 ~~ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ..++.++    .++||.|++..+.|.+..    ..++..|.+++.++.+     |++++++.+.+           ++++
T Consensus        92 ~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-----------~t~l  160 (398)
T TIGR03392        92 NLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP-----------RTRI  160 (398)
T ss_pred             HHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc-----------CceE
Confidence            8888877    478999999999987742    2346678888877643     67888877743           4578


Q ss_pred             EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEe
Q psy15447        221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVG  299 (457)
Q Consensus       221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~  299 (457)
                      |++.+++|++|.+.|+++|.++|++||+++++|++|+.|...         ..+...++|+++.|.+|.+|+.| |+++.
T Consensus       161 v~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~  231 (398)
T TIGR03392       161 LALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGVLYG  231 (398)
T ss_pred             EEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEEEEE
Confidence            889999999999999999999999999999999999865431         11222346899899999888765 89999


Q ss_pred             cHHHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447        300 SSYIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       300 ~~~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~  358 (457)
                      ++++++.+.....+                  ..| .++.+....++..++++.+.+.  ....++..++.+++.+.|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~  311 (398)
T TIGR03392       232 KTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ  311 (398)
T ss_pred             cHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence            98887765321100                  111 1234555666667778776543  24567788889999998887


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCCCHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~e  435 (457)
                         ++++.+...+.++++.+.+...        ...++.+.|.++||.++.+..+...   .....+++|++++..+|++
T Consensus       312 ---l~g~~~~~~~~~~i~~~~~~~~--------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~  380 (398)
T TIGR03392       312 ---LPGFRSFRCPGSSLLAFDFAGV--------HHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQ  380 (398)
T ss_pred             ---CCCeEEeCCCCCcEEEEEeCCc--------CHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHH
Confidence               5688776555667777766532        3457888899999999877654310   0012468999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy15447        436 DMNSLIETLCKSHDIA  451 (457)
Q Consensus       436 di~~~~~~l~~~~~~~  451 (457)
                      |+++++++|+++++.+
T Consensus       381 ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       381 DVDALVDAVGAALELL  396 (398)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999987653

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK07682 hypothetical protein; Validated

Probab=99.97  E-value=3.9e-27  Score=232.87  Aligned_cols=336  Identities=12%  Similarity=0.111  Sum_probs=233.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~~  155 (457)
                      ..++|..+.+ .+...+.+.+++.+.+... ..  .+....|..++..++++.+.+.+|.    + ++++++++++|+..
T Consensus        21 ~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~   96 (378)
T PRK07682         21 GVISLGVGEP-DFVTPWNVREASIRSLEQG-YT--SYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV   96 (378)
T ss_pred             CeEEeCCCCC-CCCCCHHHHHHHHHHHhcC-CC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence            4788887654 3334567888888877641 11  1111235556666666666554443    2 45666677899999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      ++.+++++||.|++..++|..+...+...|.++..++.       .|++++++.+.+           +++++++++++|
T Consensus        97 ~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~~~p~N  165 (378)
T PRK07682         97 AMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA-----------KTKAILLCSPNN  165 (378)
T ss_pred             HHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc-----------ccEEEEEECCCC
Confidence            99999999999999999999888888888888776653       267778776642           356777778899


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      |+|.+.+   +++|.++|++|++++|+||+|+...++.....+....+..  +.+++++||||.+|.+|   ||++++++
T Consensus       166 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~i~~~S~SK~~~~~GlR~G~~~~~~~  243 (378)
T PRK07682        166 PTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMR--ERTILISGFSKGFAMTGWRLGFIAAPVY  243 (378)
T ss_pred             CcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhccccc--CCEEEEecCcccccChhhhhhhhhcCHH
Confidence            9999987   7899999999999999999998665543212222222221  23689999999998767   99999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +++.+..... +. ..+.+++..+++.+.|+.-. ...++++.++++.+++.+.|++    .++.+..+..+.++|+.+.
T Consensus       244 ~i~~l~~~~~-~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~g~~~~~~~~~  317 (378)
T PRK07682        244 FSEAMLKIHQ-YS-MMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE----IGLTCHVPGGAFYAFPSIS  317 (378)
T ss_pred             HHHHHHHHHH-hh-ccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----CCCccCCCCeeEEEEEecc
Confidence            9998865432 11 12236666666666664211 1134567788899999999988    4666654445556666653


Q ss_pred             C-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        382 K-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       382 ~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      . ..       ...++++.|+ ++||.+.++..+.   ...++++||++..  ++++++++++.|+++++.+
T Consensus       318 ~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~---~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        318 STGL-------SSEEFAEQLLLEEKVAVVPGSVFG---ESGEGFIRCSYAT--SLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             CCCC-------CHHHHHHHHHHhCCEEEcCchhhC---cCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhhc
Confidence            2 22       3457888876 6799999875432   1235799999974  7899999999999988654

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.96  E-value=3.1e-27  Score=232.06  Aligned_cols=319  Identities=12%  Similarity=0.133  Sum_probs=231.0

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      .+++||++|.+. ++.+|.+.+++.+.++.....         ......++++.++++++.+  .+++++++++++..++
T Consensus        29 ~~~i~l~~n~~~-~~~~~~v~~a~~~~~~~~~~~---------p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~   98 (359)
T PRK03158         29 EKIVKLASNENP-YGPSPKVKEAIAAHLDELALY---------PDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMIS   98 (359)
T ss_pred             CceEEecCCCCC-CCCCHHHHHHHHHHHHHhhcC---------CCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHH
Confidence            478999987653 556889999999888753321         1123577889999998854  4555566668888888


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI  233 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i  233 (457)
                      .+++++||.|++..++|..+.......|.++..++..    |++++++.+.           ++++++++++++||+|.+
T Consensus        99 ~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~i~~p~NPtG~~  167 (359)
T PRK03158         99 RALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAID-----------EQTKIVWICNPNNPTGTY  167 (359)
T ss_pred             HHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcC-----------CCCCEEEEeCCCCCCCCC
Confidence            8899999999999999988888888889888877643    5677766553           244677778899999999


Q ss_pred             CChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447        234 CPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR  308 (457)
Q Consensus       234 ~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~  308 (457)
                      .|.+++.++++.  +|+++|+||+|....++..........+  ..+.+++++||||++|.+|   ||+++++++++.+.
T Consensus       168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~  245 (359)
T PRK03158        168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE--KYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLN  245 (359)
T ss_pred             CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH--hcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHH
Confidence            999999999887  5999999999976544321111111111  1223688999999998766   99999999998886


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .....  +  +.++++.+++.++++.-+..+..++.++++.+++.+.|++    .++.+. ++.+.++++.+..      
T Consensus       246 ~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~-~~~g~~i~~~~~~------  310 (359)
T PRK03158        246 IARPP--F--NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE----YGLFYY-PSQTNFIFVDTGR------  310 (359)
T ss_pred             HhcCC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeeC-CCcCcEEEEECCC------
Confidence            54432  2  3477777777777642211223455666777788888877    366654 5567788877642      


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                         ...++++.|.++||.+.++..+     ..++++||+++   +++|+++++++|+++
T Consensus       311 ---~~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~---~~~~~~~l~~al~~~  358 (359)
T PRK03158        311 ---DANELFEALLKKGYIVRSGAAL-----GFPTGVRITIG---LKEQNDKIIELLKEL  358 (359)
T ss_pred             ---CHHHHHHHHHHCCeEEeeCCCC-----CCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence               2357889999999999987543     23579999986   899999999999875

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.96  E-value=2.4e-28  Score=238.03  Aligned_cols=324  Identities=18%  Similarity=0.166  Sum_probs=227.3

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCC
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKR  163 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~  163 (457)
                      ||+|.++++.  +|.+.+++.+.+....        .|+..+...++++.+++++|.+..+++++|++++..++.+++++
T Consensus         1 ~~~~~~~~~~--~~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~   70 (338)
T cd06502           1 DFRSDTVTGP--TPEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQP   70 (338)
T ss_pred             CcccccCCCC--CHHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCC
Confidence            6889888774  6899999887653211        23456778999999999999778889999999999999999999


Q ss_pred             CCEEEEeCcccHHHHH---HHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC--C
Q psy15447        164 NDAVFVDENINFAIQT---GLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI--C  234 (457)
Q Consensus       164 gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i--~  234 (457)
                      ||.|+++.++|.+...   ...+.|.++..++.    .|++++++.+.+....   . .+++++|++++++|++|..  .
T Consensus        71 gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~---~-~~~~~~v~l~~p~n~g~~~~~~  146 (338)
T cd06502          71 GGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDI---H-FPPPSLVSLENTTEGGTVYPLD  146 (338)
T ss_pred             CCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCC---c-CCcceEEEEEeecCCccccCHH
Confidence            9999999999876543   23457888887765    4788898888642100   0 0245788888888874432  3


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccE-EEecHHHHHHHHhhCCc
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGF-CVGSSYIIEHHRLSGSG  313 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~-v~~~~~~~~~~~~~~~~  313 (457)
                      ++++|+++|++||+++|+||+|..+..+..|.... ...   .++|+++.|+||++|++||+ +++++++++.++.....
T Consensus       147 ~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~-~~~---~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~  222 (338)
T cd06502         147 ELKAISALAKENGLPLHLDGARLANAAAALGVALK-TYK---SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ  222 (338)
T ss_pred             HHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHH-HHH---hcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHH
Confidence            37789999999999999999986543322222111 111   24578899999999876665 56788888887654322


Q ss_pred             ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447        314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL  393 (457)
Q Consensus       314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  393 (457)
                      +..+.+.+++.++++.++|+.- ...+..+++.++.+++.+.|++    .++.+. ++.++++.+......      ...
T Consensus       223 ~~~~~~~~~~~~~a~~~~L~~~-~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~v~~~~~~------~~~  290 (338)
T cd06502         223 AGGGMRQSGFLAAAGLAALEND-LWLRRLRHDHEMARRLAEALEE----LGGLES-EVQTNIVLLDPVEAN------AVF  290 (338)
T ss_pred             hCCChhhHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHHHh----cCCCcc-cccCCeEEEecCCcc------HHH
Confidence            2222334666667776666431 1223567888889999999988    344332 456777777664322      023


Q ss_pred             HHHHHHHH---HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        394 QTICDMCI---QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       394 ~~~~~~l~---~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++.+.+.   ++|+.+.+..         .+++|++++..+|++|++++++++++
T Consensus       291 ~~l~~~l~~~~~~gi~~~~~~---------~~~lRi~~~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         291 VELSKEAIERRGEGVLFYAWG---------EGGVRFVTHWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHHHHHHhhhCCEEEEecC---------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence            34444443   6799987643         27899999999999999999999865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK09082 methionine aminotransferase; Validated

Probab=99.96  E-value=3.7e-27  Score=233.48  Aligned_cols=335  Identities=14%  Similarity=0.147  Sum_probs=236.4

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-----cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-----ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sG~~a~  153 (457)
                      ++.++||..+.+ .+..++.+.+++.+.+.....   .+....|..+++..+++.+.+++|.+     ..++++++++|+
T Consensus        29 ~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al  104 (386)
T PRK09082         29 EHGAINLSQGFP-DFDGPPYLVEALAYAMAAGHN---QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL  104 (386)
T ss_pred             hCCEEEecCCCC-CCCCCHHHHHHHHHHHHcCCC---CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence            345789887643 444568888888887764211   22223467778888888888887752     355556678999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++.+++++||.|++..++|..+...++..|.++..++.+      |++++++.++.           +++++++++++
T Consensus       105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~  173 (386)
T PRK09082        105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP-----------RTRLIILNTPH  173 (386)
T ss_pred             HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc-----------cceEEEEeCCC
Confidence            99999999999999999999999999999999998887753      56777776642           35677788889


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|+...++.. +..+....+.  .+..++++||||.+|.+|   ||++++
T Consensus       174 NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~iv~~  251 (386)
T PRK09082        174 NPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGYCVAP  251 (386)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhhhhCC
Confidence            99998865   78899999999999999999986655421 2222232222  133699999999998777   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +++++.++.......++  .+.+...++.+.++. -+...++++.++++.+.+.+.|++    .++++..+..+.++|+.
T Consensus       252 ~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~~~~~~~  325 (386)
T PRK09082        252 AALSAEFRKVHQYNTFT--VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGTYFQLVD  325 (386)
T ss_pred             HHHHHHHHHHHhhhcCC--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCeeEEEEEe
Confidence            99998886643222333  345444444444431 111123566778899999999988    56776544556677777


Q ss_pred             ecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        380 LQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       380 ~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ++.  +.       ...+++++|. ++||.+.++..+.. .+...+++|++++.  +++++++.++.|++
T Consensus       326 ~~~~~~~-------~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~~--~~~~l~~~~~rl~~  385 (386)
T PRK09082        326 YSAISDL-------DDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFAK--QEETLDAAAERLCQ  385 (386)
T ss_pred             ccccCCC-------CHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence            753  22       3457888864 66999998763211 01235789999974  78899999988864

>PLN02721 threonine aldolase

Probab=99.96  E-value=1.7e-27  Score=233.44  Aligned_cols=330  Identities=15%  Similarity=0.169  Sum_probs=226.3

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY  160 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~  160 (457)
                      +++||++|.+. . .+|.+.+++.+.  ..+..    .  ++..+...+|++.+++++|.+..+++++|++++..++.++
T Consensus         6 ~~~~~~~~~~~-~-~~~~~~~a~~~~--~~~~~----~--~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~   75 (353)
T PLN02721          6 RVVDLRSDTVT-K-PTDAMRAAMANA--EVDDD----V--LGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVH   75 (353)
T ss_pred             hhhhhhccccc-C-CCHHHHHHHHhc--cCCCc----c--cCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHH
Confidence            67899987664 3 478888887653  11111    1  1234557899999999999988999999999988888888


Q ss_pred             cC-CCCEEEEeCcccHHHHH---HHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCC
Q psy15447        161 VK-RNDAVFVDENINFAIQT---GLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNS  230 (457)
Q Consensus       161 ~~-~gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~  230 (457)
                      ++ +||.|+++.++|.+...   .....|.++..++.     .|++++++.+++....    ..+++++|++++++ +++
T Consensus        76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~----~~~~~~~v~l~~~~~np~  151 (353)
T PLN02721         76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDD----HFPTTRLICLENTHANCG  151 (353)
T ss_pred             ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCC----CCCcceEEEEeccccccC
Confidence            87 99999999999876655   35566888877764     3789999988743210    01245788887765 568


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCccc-EEEecHHHHHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG-FCVGSSYIIEH  306 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG-~v~~~~~~~~~  306 (457)
                      |.+.|   +++|.++|++||+++|+||+|.++.....+...   .+. ...+|.++.|+||+++++.| ++++++++++.
T Consensus       152 G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~---~~~-~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~  227 (353)
T PLN02721        152 GRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPV---HRL-VKAADSVSVCLSKGLGAPVGSVIVGSKSFIRK  227 (353)
T ss_pred             CccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCH---HHH-hhhCCEEEEecccccCCceeeEEecCHHHHHh
Confidence            88877   789999999999999999998765322111111   111 12457878899999986544 57788888877


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEEecCC--
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLYLQKS--  383 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~~~~~--  383 (457)
                      +......+..+....+..+++++.+++..   .+..++..++.+++.+.|++   ..++.+ ...+.++++++.+...  
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~  301 (353)
T PLN02721        228 AKRLRKTLGGGMRQVGVLAAAALVALQEN---VPKLEDDHKKAKLLAEGLNQ---IKGLRVNVAAVETNIVYFDITDGSR  301 (353)
T ss_pred             HHHHHHhcCCCeehhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEecCCccceEEEEEccCCcc
Confidence            54322111111111223334444444322   12344456778899999988   456644 3344566777777542  


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .       ....++++|.++||.+.+..         .+++|++++..++++|+++++++|++++..
T Consensus       302 ~-------~~~~~~~~L~~~gi~v~~~~---------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~  352 (353)
T PLN02721        302 I-------TAEKLCKSLEEHGVLLMPGN---------SSRIRVVTHHQISDSDVQYTLSCFQQAALT  352 (353)
T ss_pred             c-------cHHHHHHHHHhCCcEEecCC---------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence            2       35679999999999998753         468999999899999999999999987654

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.96  E-value=4.2e-27  Score=231.76  Aligned_cols=319  Identities=12%  Similarity=0.116  Sum_probs=226.3

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC----CcEEEecccHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL----EETALYSFGFST  152 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG~~a  152 (457)
                      ..+|++.|.+ .++..|.+.+++.+.+.........++. .|    ..+|++.+++++    |.    ++++++++++++
T Consensus        27 ~~i~l~~~~~-~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g----~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~  100 (368)
T PRK03317         27 VPVRLNTNEN-PYPPSPALVADIAEAVAEAAAGLNRYPD-RD----AVALRADLAAYLTAQTGVGLTVENVWAANGSNEI  100 (368)
T ss_pred             ceeEecCCCC-CCCCCHHHHHHHHHHHhhhhhhhccCCC-Cc----hHHHHHHHHHHhhhhccCCCChhhEEECCCHHHH
Confidence            4688887754 3455788999999887642111111111 12    355666666665    42    344555555689


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      +..++.+++++||.|++..++|..+....+..|.++..++.     .|++++++.+++          .+.+++++++++
T Consensus       101 l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~----------~~~~~i~l~~p~  170 (368)
T PRK03317        101 LQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAE----------HRPDVVFLTSPN  170 (368)
T ss_pred             HHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhc----------cCCCEEEEeCCC
Confidence            99999999999999999999999888888888888776652     268888888764          233566777899


Q ss_pred             CCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        228 MNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       228 ~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      ||+|.+.+.+++.++|+.++++||+||+|+....  .|. ......+..+  ..|+++||||++|.+|   ||+++++++
T Consensus       171 NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~--~~i~~~SfSK~~g~~GlRiG~~~~~~~~  246 (368)
T PRK03317        171 NPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRR--SGTPSALTLLPEYP--RLVVSRTMSKAFAFAGGRLGYLAAAPAV  246 (368)
T ss_pred             CCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcc--cCCcCHHHHHHhCC--CEEEEEechhhhccchhhhhhhhCCHHH
Confidence            9999999999999999999999999999975322  222 2223323222  2478899999998777   999999999


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE-EecC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL-YLQK  382 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i-~~~~  382 (457)
                      ++.++.....  +  +.+++.++++.++++..+...+.+++++++.+.+.+.|++    .|+.+. .+.++++.+ .+. 
T Consensus       247 ~~~l~~~~~~--~--~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~-  316 (368)
T PRK03317        247 VDALRLVRLP--Y--HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE----LGLRVA-PSDANFVLFGRFA-  316 (368)
T ss_pred             HHHHHhcCCC--C--CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEeC-CCCCcEEEEeccC-
Confidence            9988754422  2  3477888888788765433334456677888888888887    577665 344554433 222 


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                               ....+.+.|+++||++++...        ++++||+++   +++++++++++++++++
T Consensus       317 ---------~~~~~~~~l~~~Gv~v~~~~~--------~~~iRi~~~---~~~~~~~~~~~l~~~~~  363 (368)
T PRK03317        317 ---------DRHAVWQGLLDRGVLIRDVGI--------PGWLRVTIG---TPEENDAFLAALAEVLA  363 (368)
T ss_pred             ---------CHHHHHHHHHHCCEEEEeCCC--------CCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence                     235788899999999986432        479999975   78999999999998865

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.96  E-value=8e-27  Score=232.49  Aligned_cols=338  Identities=13%  Similarity=0.105  Sum_probs=239.4

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCC-C--cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGL-E--ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~~sG~~a~  153 (457)
                      +.-|+|-++..   . ..+.+.+++.+.+..+...+.  .........+..+++++.+++++|. +  .+++++|+++++
T Consensus        19 ~~~yld~a~~~---~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i   94 (401)
T PRK10874         19 AGVYLDSAATA---L-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESI   94 (401)
T ss_pred             ceEEEeCCccc---C-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHH
Confidence            34577766643   2 246788999888876432111  1111112356678899999999997 3  355666777888


Q ss_pred             HHHHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        154 ASAIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       154 ~~ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ..++.++    .++||.|++..+.|.+..    ...+..|.++..++.     .|++++++.+.           +++++
T Consensus        95 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----------~~t~l  163 (401)
T PRK10874         95 NLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-----------PRTRI  163 (401)
T ss_pred             HHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-----------cCcEE
Confidence            8888887    378999999999987643    234567888877764     26778887774           34578


Q ss_pred             EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEe
Q psy15447        221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVG  299 (457)
Q Consensus       221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~  299 (457)
                      |++.+++|++|.+.|+++|.++|+++|+++|+|++|+.|.+.         .++...++|+++.|++|.+|+.| |+++.
T Consensus       164 v~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~  234 (401)
T PRK10874        164 LALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGVLYG  234 (401)
T ss_pred             EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEEEEE
Confidence            889999999999999999999999999999999999865432         12222346899999999888765 89899


Q ss_pred             cHHHHHHHHhhC------------------Ccceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447        300 SSYIIEHHRLSG------------------SGYCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       300 ~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~  358 (457)
                      ++++++.+....                  .++.|. ++.+....++..++++.+.+.  ....++.+++.+++.+.|++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~  314 (401)
T PRK10874        235 KSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAK  314 (401)
T ss_pred             chHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence            988877653211                  011121 234545666666777776543  23567777888999999887


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCCCHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~e  435 (457)
                         ++|+.+..++.++++.+.+...        ...++.+.|.++||.++++..+...   .....+.+|++++..+|++
T Consensus       315 ---~~g~~~~~~~~~~i~~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~e  383 (401)
T PRK10874        315 ---LPGFRSFRCQDSSLLAFDFAGV--------HHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQS  383 (401)
T ss_pred             ---CCCEEEeCCCCCcEEEEEECCc--------CHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHH
Confidence               5688776556677777776542        2357888899999999887654210   0112478999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy15447        436 DMNSLIETLCKSHDIA  451 (457)
Q Consensus       436 di~~~~~~l~~~~~~~  451 (457)
                      |+++++++|+++++.+
T Consensus       384 did~ll~al~~~~~~~  399 (401)
T PRK10874        384 DVDALVNAVDRALELL  399 (401)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999987754

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.96  E-value=1.1e-26  Score=231.11  Aligned_cols=339  Identities=13%  Similarity=0.138  Sum_probs=234.9

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC----CcEEEecccH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL----EETALYSFGF  150 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG~  150 (457)
                      +.+++||..+++ .+..++++.+++.+.+.+....+   ....|    ..+|++.+++++    |.    ++.+++++++
T Consensus        30 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y---~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  101 (393)
T PRK05764         30 GRDVISLGAGEP-DFDTPEHIKEAAIEALDDGKTKY---TPAAG----IPELREAIAAKLKRDNGLDYDPSQVIVTTGAK  101 (393)
T ss_pred             cCCEEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCCc---CCCCC----hHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcH
Confidence            456889988765 44557889999888886522211   11123    345555555554    32    3466777778


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +|+..++.+++++||.|+++.++|..+...++..|.++..++.+       |++.+++.++.           .++++++
T Consensus       102 ~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~  170 (393)
T PRK05764        102 QALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP-----------KTKALIL  170 (393)
T ss_pred             HHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc-----------cceEEEE
Confidence            99999999999999999999999998888888889988877753       46777777632           3467778


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      .+++||+|.+.+   +++|.++|++||+++|+||+|+...++.. ....... ..+..+.+++++||||.+|.+|   ||
T Consensus       171 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~G~RiG~  249 (393)
T PRK05764        171 NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL-SPELRDRTITVNGFSKAYAMTGWRLGY  249 (393)
T ss_pred             ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc-CCCCcCCEEEEecCcccccCccceeEE
Confidence            888999999987   67899999999999999999976555321 1122111 0111234789999999998666   99


Q ss_pred             EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447        297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL  375 (457)
Q Consensus       297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  375 (457)
                      +++++++++.+......  ++.+.+++.+.++.+.++. .+..++++++++++.+.+.+.|++   .+++.+..+..+.+
T Consensus       250 i~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~g~~~  324 (393)
T PRK05764        250 AAGPKELIKAMSKLQSH--STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNE---IPGLECPKPEGAFY  324 (393)
T ss_pred             EecCHHHHHHHHHHHhh--cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhh---CCCCcccCCCcceE
Confidence            99999999888654322  2223467776666666641 111234667778888889999988   34777664445566


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +++.+.......  .....++.+.|++ +||.+.++..+     ...+++|+++.  ++++++++++++|.+++++.
T Consensus       325 ~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f-----~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~~  392 (393)
T PRK05764        325 VFPNVSKLLGKS--ITDSLEFAEALLEEAGVAVVPGIAF-----GAPGYVRLSYA--TSLEDLEEGLERIERFLESL  392 (393)
T ss_pred             EEEecccccccc--cCCHHHHHHHHHHhCCEEEcccccc-----CCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence            777665432000  0013577777764 69999887542     22689999986  48999999999999988754

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.96  E-value=1.1e-26  Score=231.38  Aligned_cols=330  Identities=14%  Similarity=0.089  Sum_probs=227.9

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP-RGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      .-|+|.++..   . .++.+.+++.+.+..++..+.+. ....+..+..+++++.+++++|.+  .+++.+++++++..+
T Consensus        18 ~~yl~~~~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~   93 (397)
T TIGR01976        18 RVFFDNPAGT---Q-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLL   93 (397)
T ss_pred             eEEecCCccC---C-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHH
Confidence            3566665532   2 35789999999988754332221 111233466789999999999964  355556666776655


Q ss_pred             HHhh---cCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        157 IAAY---VKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       157 i~a~---~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +.++   .++||.|++..+.|.+...    ..+..|.++..++.+      |++++++.+.           +++++|++
T Consensus        94 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-----------~~~~lv~i  162 (397)
T TIGR01976        94 SRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-----------PRTRLVAV  162 (397)
T ss_pred             HHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-----------CCceEEEE
Confidence            5554   6899999999998877643    345678888776542      5777777764           24579999


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHH
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI  303 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~  303 (457)
                      ++++|++|.+.|+++|.++|++||+++|+||+|+.|..      .   .++...++|++++|++|++|...|++++++++
T Consensus       163 ~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~------~---~~~~~~~~d~~~~s~~K~~g~~~G~l~~~~~~  233 (397)
T TIGR01976       163 TAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG------L---IDVQATGADFLTCSAYKFFGPHMGILWGRPEL  233 (397)
T ss_pred             eCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc------C---CCHHHcCCCEEEEechhhcCCceEEEEEcHHH
Confidence            99999999999999999999999999999999865421      1   12222356899999999999878999999988


Q ss_pred             HHHHHhhCCcce-------e-cCCCcHHHHHHHHHHHHHHhhC----------------cHHHHHHHHHHHHHHHHhhcc
Q psy15447        304 IEHHRLSGSGYC-------F-SASLPPFLAVAANKALHLLKAN----------------PSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       304 ~~~~~~~~~~~~-------~-~~~~~~~~~aaa~a~l~~~~~~----------------~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      ++.+......+.       | .++.+....++..++++.+.+.                +...++..++.+++++.|++ 
T Consensus       234 ~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~-  312 (397)
T TIGR01976       234 LMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSD-  312 (397)
T ss_pred             HhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            877653322221       1 1233444555556677766432                12345566778888888887 


Q ss_pred             cccCCeEEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------ccCCCCCeEEEEec
Q psy15447        360 KVTQRFLVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------EAKKQKPSIRITCN  429 (457)
Q Consensus       360 ~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------~~~~~~~~lRi~~~  429 (457)
                        +.++.+..+    ..++++.+.+...        ...++.++|.++||.++.+..+..      ..+...+++|++++
T Consensus       313 --~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~  382 (397)
T TIGR01976       313 --LPGVTLYGVARLAARVPTVSFTVHGL--------PPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA  382 (397)
T ss_pred             --CCCEEEeCCCCccCCCceEEEEeCCc--------CHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee
Confidence              445777543    2466777666532        345789999999999986543210      00112468999999


Q ss_pred             CCCCHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETL  444 (457)
Q Consensus       430 ~~~t~edi~~~~~~l  444 (457)
                      ..+|++|+++++++|
T Consensus       383 ~~~t~~di~~l~~~l  397 (397)
T TIGR01976       383 HYNTAEEVDRLLEAL  397 (397)
T ss_pred             ccCCHHHHHHHHHhC
Confidence            999999999999874

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.96  E-value=2e-26  Score=226.56  Aligned_cols=329  Identities=14%  Similarity=0.209  Sum_probs=228.0

Q ss_pred             Cee-eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHHH
Q psy15447         79 GIP-CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSAS  155 (457)
Q Consensus        79 G~~-~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~  155 (457)
                      |+. +++++.|.. +++.+|.+.+++.+.+... .+       |+.. ...+|++++|++++.+ +.+++++|+ +++..
T Consensus        30 g~~~~~~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~-------Y~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~   99 (369)
T PRK08153         30 GRPFRARIGANES-GFGPSPSVIAAMREAAAEI-WK-------YGDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGL   99 (369)
T ss_pred             CCcceeEecCCCC-CCCCCHHHHHHHHHHHHHh-hc-------CCCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence            444 569988754 6667789999988876541 11       1111 1578999999999864 345555555 67778


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      ++.+++++||.|+++.++|......+...|.++..++. ++..++++.++....       .+++++++.+++||+|.+.
T Consensus       100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~-------~~~~~i~l~~P~NPtG~~~  172 (369)
T PRK08153        100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARR-------ENAPLVYLANPDNPMGSWH  172 (369)
T ss_pred             HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcc-------cCCcEEEEeCCCCCCCCCC
Confidence            88888999999999999999888878888888887764 333333333332211       3456777778899999999


Q ss_pred             ChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHh
Q psy15447        235 PLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRL  309 (457)
Q Consensus       235 ~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~  309 (457)
                      +.+++.++++.+  +++||+||+|+....+  +.  ...+... ....++++||||++|.+|   ||+++++++++.+..
T Consensus       173 ~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~--~~--~~~~~~~-~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~  247 (369)
T PRK08153        173 PAADIVAFIEALPETTLLVLDEAYCETAPA--GA--APPIDTD-DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDK  247 (369)
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCchhhhcCc--cc--chhhhhc-CCCEEEEecchHhccCcchheeeeecCHHHHHHHHH
Confidence            988877777654  8999999998743222  21  1111111 122588999999998777   999999999988765


Q ss_pred             hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      ....  +  +.++++++++.++++.-+...+.++.++++.+++.+.|++    .|+.+. +..++++++.+..+.     
T Consensus       248 ~~~~--~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~~~~-p~~~~f~~~~~~~~~-----  313 (369)
T PRK08153        248 VRNH--F--GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARA----NGLTPL-PSATNFVAIDCGRDG-----  313 (369)
T ss_pred             hhcC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCcCcEEEEECCCCc-----
Confidence            4422  2  3577787888777742111123566677788888888877    566543 566778887764321     


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                       ..+.++.++|.++||.++....     ....+++|+++.   +++|+++++++|+++++..+
T Consensus       314 -~~a~~l~~~l~~~Gi~v~~p~~-----~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~  367 (369)
T PRK08153        314 -AFARAVLDGLIARDIFVRMPGV-----APLDRCIRVSCG---PDEELDLFAEALPEALEAAR  367 (369)
T ss_pred             -ccHHHHHHHHHHCCeEEeeCCC-----CCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence             0456899999999999953221     123469999986   79999999999999987554

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.96  E-value=2.2e-26  Score=227.90  Aligned_cols=334  Identities=13%  Similarity=0.141  Sum_probs=226.9

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----Cc-EEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EE-TALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~-~i~~~sG~~a~  153 (457)
                      |..++||..+++ .+...+.+.+++.+.+.....  ..+....|..++...+++.+.+.+|.    +. +++++++++++
T Consensus        28 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l  104 (383)
T TIGR03540        28 GVDVISLGIGDP-DLPTPKHIVEALCKAAENPEN--HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI  104 (383)
T ss_pred             CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence            567889988765 444567888888887754211  11222234445555555555544443    33 34445566899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..........|.++..++.+       |++++++.+.           .++++|++.++
T Consensus       105 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-----------~~~~~v~i~~P  173 (383)
T TIGR03540       105 AHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-----------KKAKLMFINYP  173 (383)
T ss_pred             HHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-----------ccceEEEEeCC
Confidence            99999999999999999999998888888889888877642       4566665553           24567777788


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||+|.+.+   +++|.++|++||+++|+||+|+...+..  ........+.. .+.+|+++||||.+|.+|   ||+++
T Consensus       174 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~  251 (383)
T TIGR03540       174 NNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDG--YKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG  251 (383)
T ss_pred             CCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCC--CCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence            999999999   6899999999999999999997654432  11111111111 234588999999998776   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.+.......  ..+.+.....++.++++...+ .+++++.++++.+.+.+.|++    .++.+..+..+.++++
T Consensus       252 ~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~~~  325 (383)
T TIGR03540       252 NADLIAGLGKVKTNV--DSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK----IGIDVEKPKATFYVWV  325 (383)
T ss_pred             CHHHHHHHHHHHHhc--ccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEecCCCcceEEEE
Confidence            999988876543221  122344444555555533111 134567788889999999988    4777664555667888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .+++..       ...+++++|+ ++||.+.++..+..   ...+++||+++  .+++++++.++.|++
T Consensus       326 ~l~~~~-------~~~~~~~~ll~~~gi~v~~g~~f~~---~~~~~~Ris~~--~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       326 PVPEGY-------TSAEFAARLLEETGVVVTPGVGFGE---YGEGYIRISLT--VPDERLEEAVARIKK  382 (383)
T ss_pred             ECCCCC-------CHHHHHHHHHHHCCEEEecchhhCc---cCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence            886543       4567888876 57999998764321   22478999996  467888888777653

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.96  E-value=2.7e-26  Score=228.90  Aligned_cols=335  Identities=13%  Similarity=0.119  Sum_probs=237.1

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC-CCCC-CcccChHHHHHHHHHHHhhcCC-C--cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS-CGPR-GFYGTNVVHLDLENDIASFMGL-E--ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~-~~~~-~~~g~~~~~~~l~~~la~~~g~-~--~~i~~~sG~~a~~  154 (457)
                      .-|+|.++..+    ..+.+.+++.+.+.++...+ .+.. ...-..+...++++.+++++|. +  .+++++++++++.
T Consensus        24 ~iYld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~   99 (406)
T PRK09295         24 LAYLDSAASAQ----KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGIN   99 (406)
T ss_pred             eEEEeCccccc----CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH
Confidence            46777776533    25678999988887543211 1111 0111345677899999999985 2  4566666678888


Q ss_pred             HHHHh----hcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        155 SAIAA----YVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       155 ~ai~a----~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++.+    ..++||.|++....|.+...    ..+..|.++..++.+     |++++++.+.           +++++|
T Consensus       100 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-----------~~t~lv  168 (406)
T PRK09295        100 LVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-----------ERTRLL  168 (406)
T ss_pred             HHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-----------CCcEEE
Confidence            77765    45889999999988876532    234568888777643     6788877764           245788


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~  300 (457)
                      ++.+++|++|.+.|+++|.++|+++|+++++|++|+.|...         .++...++|+++.|++|.+|+.| |+++.+
T Consensus       169 ~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~  239 (406)
T PRK09295        169 AITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGILYVK  239 (406)
T ss_pred             EEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccc---------cCchhcCCCEEEeehhhccCCCCcEEEEEc
Confidence            89999999999999999999999999999999999876431         22323456899999999888665 888888


Q ss_pred             HHHHHHHHhhCCc-------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhc
Q psy15447        301 SYIIEHHRLSGSG-------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       301 ~~~~~~~~~~~~~-------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~  358 (457)
                      +++++.+.....+                   ..| .++.+....++..++++++.+.  +...++.+++.+++++.|++
T Consensus       240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~  319 (406)
T PRK09295        240 EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES  319 (406)
T ss_pred             hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence            8877654311000                   111 2345666777777888887653  45667888899999999988


Q ss_pred             ccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCH
Q psy15447        359 HKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       359 ~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~  434 (457)
                         ++++.+.++. ..+++.+.++..        ...++.+.|.++||.++.+..+..   .....++.+|++++..+|+
T Consensus       320 ---~~~~~~~~~~~~~~iv~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~  388 (406)
T PRK09295        320 ---VPDLTLYGPQNRLGVIAFNLGKH--------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTH  388 (406)
T ss_pred             ---CCCEEEeCCCCCceEEEEEECCc--------CHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCH
Confidence               5688776542 356776666543        334677888889999987655432   0111235899999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        435 QDMNSLIETLCKSHD  449 (457)
Q Consensus       435 edi~~~~~~l~~~~~  449 (457)
                      +|||+++++|+++..
T Consensus       389 ~did~l~~~l~~i~~  403 (406)
T PRK09295        389 EEVDRLVAGLQRIHR  403 (406)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998754

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.96  E-value=1.6e-26  Score=226.04  Aligned_cols=328  Identities=13%  Similarity=0.124  Sum_probs=227.1

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~~  155 (457)
                      +++||+++++ .+...+++.+++.+......    .+....|..++...+++.+.+..|    .+ ++++++++++++..
T Consensus         1 ~~~~~~~g~p-~~~~~~~~~~~~~~~~~~~~----~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~   75 (350)
T TIGR03537         1 RLFDFGTGDP-KEPTPPFIRKALIDAVPEVS----QYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH   75 (350)
T ss_pred             CeEeccCCCC-CCCCCHHHHHHHHHHHhccC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            4678888765 45556788888887654311    122223444555555555554445    22 34545555688888


Q ss_pred             HHHhhcCCC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        156 AIAAYVKRN---DAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       156 ai~a~~~~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      ++.+++++|   |.|+++.++|..+...+...|.++..++.+       |++++++.+.+           +++++++.+
T Consensus        76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~~  144 (350)
T TIGR03537        76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE-----------ETKIVWINY  144 (350)
T ss_pred             HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh-----------ccEEEEEeC
Confidence            888888887   699999999999999999999998877642       67788777653           346777778


Q ss_pred             CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      ++||+|.+.+   +++|.++|++||+++|+||+|+...++.......   ...++ ..|+++|+||.+|.+|   ||+++
T Consensus       145 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~  220 (350)
T TIGR03537       145 PHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSAL---EVGIE-NVLAFHSLSKRSGMTGYRSGFVAG  220 (350)
T ss_pred             CCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchh---hcCcC-CEEEEeecccccCCccccceeeec
Confidence            9999999999   8899999999999999999987554443211111   11222 3588999999997665   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      ++++++.++.....+  +.+.+++..+++.+++.......+.+++++++.+.+.+.|++    .|+.+..+..+.++++.
T Consensus       221 ~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~----~g~~~~~~~g~~~~~~~  294 (350)
T TIGR03537       221 DEKLISFLRKLRANF--GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNK----VGLEYLYPDATFYLWVK  294 (350)
T ss_pred             CHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeEEEEEEE
Confidence            998888887543332  333355555555555432111134567788888899898888    56666544456667888


Q ss_pred             ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ++...       ...++++.|.++||.+.++..+.   ....+++|+++.  .++++++++++.+++
T Consensus       295 ~~~~~-------~~~~l~~~L~~~gv~v~~g~~f~---~~~~~~~Ri~~~--~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       295 VPSGI-------DAKDYALRLLENGIVVAPGENFG---SGEEGYVRVALV--PTLEECEEALRLWER  349 (350)
T ss_pred             CCCCC-------CHHHHHHHHHHCCEEEcCchhhC---CCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence            76543       35689999999999998865431   122578999985  578999999988865

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.96  E-value=2.5e-26  Score=227.21  Aligned_cols=335  Identities=10%  Similarity=0.072  Sum_probs=233.9

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      ++.++|+++.+.. .+..+|.+.+++.+++......      .|+......++++.+++++|.+  .+++++++++++..
T Consensus        26 ~~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~   98 (380)
T PRK06225         26 KDKEMIWMGQNTN-HLGPHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYL   98 (380)
T ss_pred             hcCCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHH
Confidence            3467899987643 3456799999999988752211      1222333578999999998854  56778888899999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ++.+++++||.|++..+.|......+...|.++++++.        .|++++++.+..           +++++++.+++
T Consensus        99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~  167 (380)
T PRK06225         99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE-----------NTRLIYLIDPL  167 (380)
T ss_pred             HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC-----------CceEEEEeCCC
Confidence            99999999999999999888777777788888877653        256777766532           34677666788


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|+....+   ....  ..+.+ +.++++.||||.+|.+|   ||+++++
T Consensus       168 NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~---~~~~--~~~~~-~~~i~~~s~SK~~g~~G~RiG~i~~~~  241 (380)
T PRK06225        168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE---HTLA--AEYAP-EHTVTSYSFSKIFGMAGLRIGAVVATP  241 (380)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc---CCch--hhcCC-CCEEEEeechhhcCCccceeEEEecCH
Confidence            99999887   789999999999999999998632221   1111  12223 33588899999998665   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLY  379 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~  379 (457)
                      ++++.++.... ..+  +.+.+.++++.++++...+. +..++.++++.+.+.+.|++   ++++.+ ..++.+.++++.
T Consensus       242 ~l~~~~~~~~~-~~~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~g~~~~~~  315 (380)
T PRK06225        242 DLIEVVKSIVI-NDL--GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDE---IEGVFLPVYPSHGNMMVID  315 (380)
T ss_pred             HHHHHHHHHHh-ccc--CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh---CcCCccccCCCCCeEEEEE
Confidence            99988765431 122  33666666666665432111 22344556667777788876   344322 124557788887


Q ss_pred             ecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        380 LQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       380 ~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +... .       ...+++++|.++||.++++.++..  ..+.+++|+++.  .+++++++++++|++++++++.
T Consensus       316 ~~~~~~-------~~~~l~~~l~~~gi~v~~g~~~~~--~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~  379 (380)
T PRK06225        316 ISEAGI-------DPEDLVEYLLERKIFVRQGTYTSK--RFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT  379 (380)
T ss_pred             cccccC-------CHHHHHHHHHHCCEEEcCCcccCc--CCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence            7542 2       345788999999999988654321  123568999986  4799999999999999998775

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.96  E-value=2.8e-26  Score=225.14  Aligned_cols=290  Identities=17%  Similarity=0.167  Sum_probs=214.3

Q ss_pred             hHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHH--HHHHHHhcCCeEEEec-----C
Q psy15447        124 NVVHLDLENDIASFMGLE--E-TALYSFGFSTSASAIAAYVKRNDAVFVDENINFA--IQTGLIASRCKVQYFK-----H  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~--~~~~~~~~g~~~~~~~-----~  193 (457)
                      .+...++++.+++++|.+  . ++++++|++|+..++.+++++||.|++....|.+  .....+..|.++..++     .
T Consensus        31 ~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~  110 (356)
T cd06451          31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEA  110 (356)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCC
Confidence            466889999999999973  3 4667788999999999999999999998877765  3455677788877765     3


Q ss_pred             CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      .|++++++.+.+          .++++|++.++++++|.+.|+++|.++|++||+++++|++|++|...         +.
T Consensus       111 ~~~~~l~~~i~~----------~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~---------~~  171 (356)
T cd06451         111 VSPEEIAEALEQ----------HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEP---------FR  171 (356)
T ss_pred             CCHHHHHHHHhc----------cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCcc---------cc
Confidence            478888888854          24467777788889999999999999999999999999999875421         11


Q ss_pred             CCCCCccEEEecCcccccCc-c-cEEEecHHHHHHHHh--hCCcc---------------eecCCCcHHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGSV-G-GFCVGSSYIIEHHRL--SGSGY---------------CFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~~~~~~--~~~~~---------------~~~~~~~~~~~aaa~a~l~~  334 (457)
                      +...++|++++|++|+++.+ | |+++.++++++.+..  ...++               ..+++.++...+++.++++.
T Consensus       172 ~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~  251 (356)
T cd06451         172 MDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDL  251 (356)
T ss_pred             ccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHH
Confidence            11234588999999999753 3 899999988877653  11111               12233455555666777777


Q ss_pred             HhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC--CC-eEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEe
Q psy15447        335 LKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD--TP-LKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAIT  408 (457)
Q Consensus       335 ~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~  408 (457)
                      +...  +...++.+++.+++.+.|++    .|+++..++.  ++ +.++.++...       ...++++.|.++ ||.++
T Consensus       252 l~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~gI~~~  320 (356)
T cd06451         252 ILEEGLENRWARHRRLAKALREGLEA----LGLKLLAKPELRSPTVTAVLVPEGV-------DGDEVVRRLMKRYNIEIA  320 (356)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCcccCCCceEEEECCCCC-------CHHHHHHHHHHhCCEEEe
Confidence            6543  35677888899999999988    4776653322  33 3345544333       456899999999 99998


Q ss_pred             ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ++..+     ..++++|++++..+|++|+++++++|++++
T Consensus       321 ~g~~~-----~~~~~iRis~~~~~~~e~v~~~~~~l~~~~  355 (356)
T cd06451         321 GGLGP-----TAGKVFRIGHMGEATREDVLGVLSALEEAL  355 (356)
T ss_pred             ccccc-----ccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            76532     224699999999999999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.96  E-value=2.4e-26  Score=227.94  Aligned_cols=339  Identities=13%  Similarity=0.089  Sum_probs=224.8

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE-ecccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL-YSFGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~-~~sG~~a  152 (457)
                      +|+.++||..+.. .+...+.+.+++.+.+.....  ..+....|..++.+.+++.+.+..|    .++.++ ++++.++
T Consensus        28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a  104 (388)
T PRK07366         28 AGKELIDLSLGSS-DLPAPAHALEAIAQSLHDPST--HGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG  104 (388)
T ss_pred             cCCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCccc--CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence            4678899988754 455568899999887754211  1122223444444445544444334    232344 4555689


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      +..++.+++++||.|++..++|..+...++..|.++..++..       |++++++.+.           .+++++++.+
T Consensus       105 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~i~l~~  173 (388)
T PRK07366        105 TAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-----------AQARLMVLSY  173 (388)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-----------ccceEEEEeC
Confidence            999999999999999999999999988889999998877643       2344444332           2346777888


Q ss_pred             CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC-CccEEEecCcccccCcc---cEEE
Q psy15447        226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE-EVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~-~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      ++||||.+.+   +++|.++|++||++||+||+|....+... ..........+. ...|+++||||++|.+|   ||++
T Consensus       174 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v  252 (388)
T PRK07366        174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI  252 (388)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence            9999999998   56778899999999999999986554321 001111222222 23478899999998665   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++++.+......+..+  .++....++.+++... +..++.++.++++.+++.+.|++    .++.+..+..+.++|
T Consensus       253 ~~~~li~~l~~~~~~~~~~--~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~  326 (388)
T PRK07366        253 GNAQLIQALRQVKAVVDFN--QYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPLPEATMYVW  326 (388)
T ss_pred             CCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEE
Confidence            9999998886544333222  2232333444444211 11134677788888999999988    466555466788888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +.++.....     ...++++.|+ ++||.+.++..+.   ....+++||+++  .++++++++++.|+++
T Consensus       327 ~~~~~~~~~-----~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~l~rl~~~  387 (388)
T PRK07366        327 AKLPEPWQG-----NSVEFCTQLVAQTGVAASPGSGFG---KSGEGYVRFALV--HDPDILEEAVERIAAF  387 (388)
T ss_pred             EECCcccCC-----CHHHHHHHHHHhCCEEEeCchHhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence            887653100     2346777774 6699999875421   122479999987  4799999999998765

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=3.9e-26  Score=223.70  Aligned_cols=334  Identities=16%  Similarity=0.151  Sum_probs=246.1

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC--CCCCCcccChHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS--CGPRGFYGTNVVHLDLENDIASFMGLE--E-TALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~  155 (457)
                      -|+|.+...   . .+..+.+++.+...+|.-..  ..+....-..+..++.++.+++++|.+  + ++|+.+.++++..
T Consensus        24 vylD~aa~~---~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~   99 (405)
T COG0520          24 VYLDNAATS---Q-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNL   99 (405)
T ss_pred             EEecCcccc---c-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHH
Confidence            355555432   1 25679999999887664322  222222223567888999999999965  3 4555566688887


Q ss_pred             HHHhh---cCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        156 AIAAY---VKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       156 ai~a~---~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +..++   .++||.|++....|.+....    .+..|+++.+++.+     ++++++..+.           +++++|.+
T Consensus       100 va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-----------~~Tklvai  168 (405)
T COG0520         100 VARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-----------PKTKLVAL  168 (405)
T ss_pred             HHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-----------CCceEEEE
Confidence            77777   68999999999998875433    33447888888754     4677777543           57899999


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecH
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSS  301 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~  301 (457)
                      .++.|.+|.+.|+++|.++||++|+++++|.+|+.|.+.         .++...++|+++.|.+|++ |+.| |++.+++
T Consensus       169 s~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~---------idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~  239 (405)
T COG0520         169 SHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLP---------IDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK  239 (405)
T ss_pred             ECccccccccchHHHHHHHHHHcCCEEEEECccccCccC---------CCchhcCCCEEEEcccccccCCCceEEEEEch
Confidence            999999999999999999999999999999999987542         3444457799999999966 5545 8999999


Q ss_pred             HHHHHHHhhC-------------------Ccceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcc
Q psy15447        302 YIIEHHRLSG-------------------SGYCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       302 ~~~~~~~~~~-------------------~~~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      ++.+.+.+..                   .++.|- ++.+.....+..++++++++.  .+..++.+++.+++.+.|++ 
T Consensus       240 ~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~-  318 (405)
T COG0520         240 ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSE-  318 (405)
T ss_pred             HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc-
Confidence            9998873211                   111121 233444444445778877664  45778888999999999998 


Q ss_pred             cccCCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCC
Q psy15447        360 KVTQRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHT  433 (457)
Q Consensus       360 ~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t  433 (457)
                        ++++.+.+++   ..+++.+.++..        ...++...|.++||.++.+.+|..   ........+|++++.++|
T Consensus       319 --~~~v~i~g~~~~~r~~~vsF~v~~~--------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt  388 (405)
T COG0520         319 --LPGVEIYGPPDADRGGIVSFNVKGI--------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT  388 (405)
T ss_pred             --CCCeEEecCCcccCceEEEEEeCCC--------CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC
Confidence              7889988765   578888888765        356899999999999998877653   111223459999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCKSHD  449 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~  449 (457)
                      ++|||+++++|+++.+
T Consensus       389 ~edid~l~~aL~~~~~  404 (405)
T COG0520         389 EEDVDRLLEALKKALA  404 (405)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998764

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.96  E-value=9.8e-27  Score=228.05  Aligned_cols=320  Identities=14%  Similarity=0.134  Sum_probs=226.9

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      +++.++|++.|.. .++.+|.+++++.+.+.....    +     ...-..+|++.++++++.+  .+++++++++++..
T Consensus        27 ~~~~~i~l~~nen-~~~~~~~v~~a~~~~~~~~~~----Y-----p~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~   96 (366)
T PRK01533         27 GDHSFVKLASNEN-PFGCSPRVLDELQKSWLDHAL----Y-----PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQI   96 (366)
T ss_pred             CCCceEEeCCCCC-CCCCCHHHHHHHHHHHHhcCc----C-----CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence            3567899988754 455578999999887655221    1     1122467889999988854  34555555688899


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      ++.+++++||.|++..++|..+...+...|.++..++.+    |++++++.+++           +++++++++++||||
T Consensus        97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~-----------~~~~v~i~~P~NPTG  165 (366)
T PRK01533         97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN-----------DTKIVWICNPNNPTG  165 (366)
T ss_pred             HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCc-----------CCcEEEEeCCCCCCC
Confidence            999999999999999999999998899999998887653    67888776642           345777778999999


Q ss_pred             CCCChHHHHHH---HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        232 DICPLKDILSL---RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       232 ~i~~l~~i~~l---~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      .+.+.+++.++   |++++ ++|+||+|...............  +...+..|+++||||.+|.+|   ||+++++++++
T Consensus       166 ~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~--~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~  242 (366)
T PRK01533        166 TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPL--LEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIE  242 (366)
T ss_pred             CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHH--hccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHH
Confidence            99996655555   55555 67789998643322100111111  111223589999999998766   99999999999


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .++.....    .+.+.++..++.++|+.-+..++.++..+++.+++.+.++.    .|+.+. ++.++++++.+.+   
T Consensus       243 ~l~~~~~~----~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~----~g~~~~-~~~~nf~~~~~~~---  310 (366)
T PRK01533        243 KLNVVRLP----FNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE----NEIPFY-QSQTNFIFLPVEN---  310 (366)
T ss_pred             HHHHhcCC----CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCccC-CCcCcEEEEeCCC---
Confidence            88754322    24577777777777642111123455666677777777777    466654 5578888887742   


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                             ..++.+.|+++||.+++.          ++++||++.   +.+|+++++++|+++++..+.
T Consensus       311 -------~~~~~~~l~~~GI~Vr~~----------~~~iRis~~---~~~~~~~l~~al~~~~~~~~~  358 (366)
T PRK01533        311 -------GGEIYEACAHAGFIIRPF----------PNGVRITVG---TREQNEGVISVLQQHFENKKR  358 (366)
T ss_pred             -------HHHHHHHHHHCCcEEccC----------CCceEEeCC---CHHHHHHHHHHHHHHHHhccc
Confidence                   236889999999999862          268999986   799999999999998876654

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.96  E-value=3.4e-26  Score=226.76  Aligned_cols=334  Identities=14%  Similarity=0.156  Sum_probs=224.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEe-cccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALY-SFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~-~sG~~a~  153 (457)
                      |.+++|++.+++ .+...+.+.+++.+.+.....  ..+....|..++...+++.+.+..|.    ++.+++ +++++++
T Consensus        30 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i  106 (385)
T PRK09276         30 GVDVISLGIGDP-DLPTPDHIIEAMCKAVEDPEN--HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI  106 (385)
T ss_pred             CCCEEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence            566889988764 344567888888888764211  11222234444555555555444352    233444 5556899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..++|..+...++..|.++..++..       |++++++.+.           .++++|+++++
T Consensus       107 ~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~-----------~~~~~v~l~~p  175 (385)
T PRK09276        107 AHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA-----------KKAKLMFINYP  175 (385)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc-----------ccceEEEEeCC
Confidence            99999999999999999999988888888889888876542       4556655443           24567777788


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||||.+.+   +++|.++|++||+++|+||+|....++.  .........+. .+.+|+++||||.+|.+|   ||+++
T Consensus       176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~  253 (385)
T PRK09276        176 NNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDG--YKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG  253 (385)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCC--CCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC
Confidence            999999998   5788889999999999999997654431  11111111211 234588999999998776   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.+.......  ..+.++....++.+.+...+. .++.+++++++.+++.+.|++    .++.+..+..+.++++
T Consensus       254 ~~~l~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~v  327 (385)
T PRK09276        254 NADLIAGLGKVKSNV--DSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGLEVEPPKATFYVWA  327 (385)
T ss_pred             CHHHHHHHHHHHhhc--cCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEE
Confidence            999998886543221  222344455555555532111 134567788888999999988    4676654455666788


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++...       ...+++++|++ +||.+.++..+.   ....+++||+++  .+++++.++++.|.+
T Consensus       328 ~~~~~~-------~~~~l~~~ll~~~gi~v~~g~~f~---~~~~~~~Ris~~--~~~~~l~~~l~~l~~  384 (385)
T PRK09276        328 PVPKGY-------TSAEFATLLLDKAGVVVTPGNGFG---EYGEGYFRIALT--VPDERIEEAVERIKK  384 (385)
T ss_pred             ECCCCC-------CHHHHHHHHHHhCCEEECCchhhC---CCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence            876543       34578888874 799999875432   122469999996  477888888777653

>PRK08068 transaminase; Reviewed

Probab=99.96  E-value=3.3e-26  Score=226.96  Aligned_cols=334  Identities=14%  Similarity=0.153  Sum_probs=224.2

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~  153 (457)
                      |..++||+.+++ ++..+|.+.+++.+.+.....  ..+....|..++..++++.+.+..|.    + ++++++++++++
T Consensus        31 ~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l  107 (389)
T PRK08068         31 GHDVINLGQGNP-DQPTPEHIVEALQEAAENPAN--HKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGL  107 (389)
T ss_pred             CCCeEEecCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHH
Confidence            457899988765 444467888988888764211  11111234444444444444333352    3 355666777888


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..+...+...|.++..++.+       |++++++.+.           .++++|++.++
T Consensus       108 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~l~~P  176 (389)
T PRK08068        108 VELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-----------EKAKLMYLNYP  176 (389)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-----------ccceEEEEECC
Confidence            88899999999999999999999888889999988877653       3556665553           23467777778


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||||.+.+   +++|.++|++||+++|+||+|+...+.... ..+....+.  .+..|+++||||.+|.+|   ||+++
T Consensus       177 ~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~  254 (389)
T PRK08068        177 NNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA--KDVGIELYTLSKTFNMAGWRVAFAVG  254 (389)
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc--cCCEEEEecchhccCCccceeEeEec
Confidence            999999999   468888999999999999998643332111 111122221  223588999999998777   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.+......+  ..+.++....++.+++.. -+..+.++++++++.+.+.+.|++    .|+.+..+.++.++++
T Consensus       255 ~~~l~~~l~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~g~~~~~~~g~~~~~v  328 (389)
T PRK08068        255 NESVIEAINLLQDHL--FVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACRE----IGWEVDAPKGSFFAWM  328 (389)
T ss_pred             CHHHHHHHHHHHhhc--cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCeeEEEEE
Confidence            999998886554332  223344444444444421 111134677888889999999988    4666553444566788


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++...       ...++++.|++ +||.+.++..+.   ..+.+++||++.  ..++.+.+.++.|++
T Consensus       329 ~~~~~~-------~~~~~~~~l~~~~gi~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~al~~l~~  385 (389)
T PRK08068        329 PVPKGY-------TSEQFADLLLEKAHVAVAPGNGFG---EHGEGYVRVGLL--TDEERLREAVERIGK  385 (389)
T ss_pred             ECCCCC-------CHHHHHHHHHHhCCEEEecchHhC---ccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence            876543       34679999986 599998875431   123579999996  366777777777664

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.96  E-value=2.3e-26  Score=226.09  Aligned_cols=317  Identities=14%  Similarity=0.146  Sum_probs=220.3

Q ss_pred             CCeeeEEeecCC-ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHH
Q psy15447         78 NGIPCINFATHN-YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STS  153 (457)
Q Consensus        78 ~G~~~id~~s~~-~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~  153 (457)
                      ++++++||++|. +++  ..|.+.+++.+.+..+.. +.        .....++++.+++++|.+  ..+++++|+ +++
T Consensus        32 ~~~~~i~l~~~~~~~~--~~~~~~~~~~~~~~~~~~-y~--------~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i  100 (361)
T PRK00950         32 DPESIIKLGSNENPLG--PSPKAVEAIEKELSKIHR-YP--------EPDAPELREALSKYTGVPVENIIVGGDGMDEVI  100 (361)
T ss_pred             CccceEEccCCCCCCC--CCHHHHHHHHHHHHhhcC-CC--------CCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHH
Confidence            567899999874 444  468899998887765321 11        112488999999999864  345546665 667


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      ..++.+++++||.|+++.+.|..+...++..|.++..++.     .|++++++.+..           +++++++++++|
T Consensus       101 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~p~n  169 (361)
T PRK00950        101 DTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITE-----------KTKVIFLCTPNN  169 (361)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc-----------CCCEEEEeCCCC
Confidence            7888888899999999999888877778888988887752     257777776632           345777778899


Q ss_pred             CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      |+|.+.|.+++.++|+++|+++|+||+|+... +.....+...    .+. .++++||||++|.+|   ||+++++++++
T Consensus       170 ptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~----~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~~~~  243 (361)
T PRK00950        170 PTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALE----YDN-LIIGRTFSKVFGLAGLRIGYGFVPEWLID  243 (361)
T ss_pred             CCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHh----cCC-EEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence            99999999999999999999999999996432 2111111111    122 488899999998776   99999999988


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .++.....+    +.+++..+++.++++..+..++.+++++++.+++.+.|.       +.+. ++.++++++.+.. . 
T Consensus       244 ~~~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~-------~~~~-~~~~~~i~~~~~~-~-  309 (361)
T PRK00950        244 YYMRAKTPF----SLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP-------FKVY-PSEANFVLVDVTP-M-  309 (361)
T ss_pred             HHHHhcCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC-------eeEC-CCcceEEEEECCC-C-
Confidence            887554332    245666666666653211112233444444444444432       3343 4567788887733 2 


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                            ...++++.|.++||.++++..+.   ...++++|++++   +.+|+++++++|++++
T Consensus       310 ------~~~~~~~~l~~~gv~v~~~~~f~---~~~~~~lRis~~---~~~~~~~l~~~L~~il  360 (361)
T PRK00950        310 ------TAKEFCEELLKRGVIVRDCTSFR---GLGDYYIRVSIG---TFEENERFLEILKEIV  360 (361)
T ss_pred             ------CHHHHHHHHHHCCEEEeeCCccC---CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence                  45679999999999998754211   123568999986   7899999999998875

>PRK07324 transaminase; Validated

Probab=99.96  E-value=3.2e-26  Score=225.40  Aligned_cols=330  Identities=12%  Similarity=0.104  Sum_probs=231.1

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSA  154 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~  154 (457)
                      .|..+++++-+.+. +...+.+ +++.+++.+....++.   ..|    ..+|++.++++++   .+++++++++++|+.
T Consensus        24 ~~~~~~~~~~~e~~-~~~~~~~-~~~~~~~~~~~~~Y~~---~~G----~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~   94 (373)
T PRK07324         24 AESCIDSLTLEELL-ALAGKNP-EAFYQELGQKKLTYGW---IEG----SPEFKEAVASLYQNVKPENILQTNGATGANF   94 (373)
T ss_pred             ccCCCCCCcHHHHH-hccCcch-HHHHHHHhcCCccCCC---CCC----CHHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence            45667777655543 2234556 8888887763333221   123    3577888888764   345677777789999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|+++.++|......++..|.++..++.       .|++++++.+.           ++++++++++++
T Consensus        95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-----------~~~kli~i~~p~  163 (373)
T PRK07324         95 LVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-----------PNTKLICINNAN  163 (373)
T ss_pred             HHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-----------CCCcEEEEeCCC
Confidence            999999999999999999999988888889988887764       25677766553           245688888999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|+...++.  . ........  +..|+++||||.+|.+|   ||+++++
T Consensus       164 NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~--~-~~s~~~~~--~~~I~~~s~SK~~~~~G~RiG~i~~~~  238 (373)
T PRK07324        164 NPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG--S-TPSIADLY--EKGISTNSMSKTYSLPGIRVGWIAANE  238 (373)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--C-CCChhhcc--CCEEEEecchhhcCCccceeEEEecCH
Confidence            99999998   8899999999999999999987543332  1 11111221  12488999999998766   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.++........+  .+++...++..+++..+. .+..++.++++.+.+.+.|++   .+++.+..+..+...++.+
T Consensus       239 ~li~~~~~~~~~~~~~--~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~---~~~~~~~~p~gg~~~~i~~  313 (373)
T PRK07324        239 EVIDILRKYRDYTMIC--AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAK---EPRVSYVKPKAVSTSFVKL  313 (373)
T ss_pred             HHHHHHHHHhCcEEec--CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceEECCCceEEEEEEe
Confidence            9998887654333333  355555555555542211 123456667778888888877   3566665555556667776


Q ss_pred             cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +...       ...+++++|+ ++||.+.++..+     ..++++||++..  +++.+++.++.|++++++.
T Consensus       314 ~~~~-------~~~~~~~~ll~~~gv~v~pg~~F-----~~~~~iRis~~~--~~~~l~~~l~rl~~~l~~~  371 (373)
T PRK07324        314 DVDM-------PSEDFCLKLLKETGVLLVPGNRF-----DLEGHVRIGYCC--DTETLKKGLKKLSEFLREF  371 (373)
T ss_pred             CCCC-------CHHHHHHHHHHhcCEEEECcccc-----CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence            6443       3457888876 569999987643     235799999864  6899999999999988753

>PRK12414 putative aminotransferase; Provisional

Probab=99.96  E-value=4.3e-26  Score=225.58  Aligned_cols=337  Identities=16%  Similarity=0.157  Sum_probs=230.7

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~  153 (457)
                      +..++||..+.+ .+...+.+.+++.+.+.+ +.  ..+....|..++++++++.+++++|.     ++++++++|++++
T Consensus        28 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al  103 (384)
T PRK12414         28 QHDALNLSQGAP-NFAPDPALVEGVARAMRD-GH--NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL  103 (384)
T ss_pred             hCCeEEcCCCCC-CCCCCHHHHHHHHHHHHh-CC--CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence            346789988754 455578899998887764 21  12222346678888888888888775     2477777888999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++.+++.+||.|++..++|..+...++..|.++..++..      |++.+++.++           +++++|++++++
T Consensus       104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v~i~~p~  172 (384)
T PRK12414        104 YAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-----------PRTRMIIVNTPH  172 (384)
T ss_pred             HHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-----------cccEEEEEcCCC
Confidence            99999999999999999999988888888888888776642      5677776663           245677778899


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|+...+.. ....+..+.+.  .+..|+++||||.+|.+|   ||++++
T Consensus       173 NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~pGlRiG~~v~~  250 (384)
T PRK12414        173 NPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL--AERSVIVSSFGKSYHVTGWRVGYCLAP  250 (384)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc--cCcEEEEecccccccCccceEEEEecC
Confidence            99999976   6788889999999999999998655432 11112221122  122489999999998766   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +++++.+........++.  +.+...++.+.++.-....+.++.++++.+.+.+.|++    .|+.+..+.++.++|+.+
T Consensus       251 ~~l~~~l~~~~~~~~~~~--s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~~~~gg~~~~~~~  324 (384)
T PRK12414        251 AELMDEIRKVHQFMVFSA--DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAG----SRFELLPSEGSFFMLARF  324 (384)
T ss_pred             HHHHHHHHHHHhheecCC--CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCcceEEEEcc
Confidence            999888765432222332  44444444444421111123567788899999999988    467665444556666666


Q ss_pred             cCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ......     ...+++ +.|.++||.+.++..+.. .....+++||+++.  +++++++.++.|.+
T Consensus       325 ~~~~~~-----~~~~~~~~~l~~~gV~v~pg~~f~~-~~~~~~~iRis~~~--~~~~~~~~~~rl~~  383 (384)
T PRK12414        325 RHFSDE-----SDSDFVLRLIRDARVATIPLSAFYT-DGTDTGLIRLSFSK--DDATLVEGARRLCS  383 (384)
T ss_pred             cccCCC-----CHHHHHHHHHHhCCEEEecchhhcC-CCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence            431000     123455 455678999998764321 01124789999984  68999999888764

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.96  E-value=5.3e-26  Score=226.86  Aligned_cols=336  Identities=15%  Similarity=0.170  Sum_probs=233.8

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhc-CCCCCCCCC-cccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKN-GVGSCGPRG-FYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~-~~~~~~~~~-~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~  155 (457)
                      -|+|.++..   . ..+.+.+++.+.++.. +....+... ..-..+..+++++.+++++|.+   .+++++++++++..
T Consensus        20 ~yld~~~~~---~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~   95 (403)
T TIGR01979        20 VYLDSAATS---Q-KPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINL   95 (403)
T ss_pred             EEEeCcccc---C-CCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHH
Confidence            466666542   2 2467888888877653 111111110 0112345678999999999965   45666667788777


Q ss_pred             HHHhh----cCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        156 AIAAY----VKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       156 ai~a~----~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ++.++    .++||.|++..+.|.+..    ......|.++..++.     .|++++++.+.           +++++|+
T Consensus        96 ~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-----------~~~~lv~  164 (403)
T TIGR01979        96 VAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-----------EKTKLVA  164 (403)
T ss_pred             HHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-----------cCCeEEE
Confidence            77654    578999999999888754    234466888777754     26778877774           3467888


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS  301 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~  301 (457)
                      +.++++++|.+.|+++|.++|++||+++|+|++|+.|...         .++...++|+++.|++|.+|+.| |+++.++
T Consensus       165 ~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~  235 (403)
T TIGR01979       165 ITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---------VDVQALDCDFYVFSGHKMYGPTGIGVLYGKE  235 (403)
T ss_pred             EEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc---------cCccccCCCEEEEecccccCCCCceEEEEch
Confidence            9999999999999999999999999999999999876431         12222356899999999988766 8888888


Q ss_pred             HHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhccc
Q psy15447        302 YIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       302 ~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      ++++.+.....+                  +.| .++.+....+++.++++.+.+.  +...++..++.+++++.|++  
T Consensus       236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~--  313 (403)
T TIGR01979       236 ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE--  313 (403)
T ss_pred             HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc--
Confidence            877665321100                  112 1234555566667778777553  45678888899999999987  


Q ss_pred             ccCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCC
Q psy15447        361 VTQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHT  433 (457)
Q Consensus       361 ~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t  433 (457)
                       ++++++..+.    .++++.+.+...        ...++.+.|.++||.++.+.++..   ......+++|++++..+|
T Consensus       314 -~~g~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t  384 (403)
T TIGR01979       314 -IPGLRIYGPRDAEDRGGIISFNVEGV--------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT  384 (403)
T ss_pred             -CCCEEEeCCCCccccCceEEEEeCCc--------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC
Confidence             5688876443    256777776542        234688889999999986543221   001224689999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q psy15447        434 EQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~~~  451 (457)
                      ++|+++++++|+++++.+
T Consensus       385 ~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       385 EEDIDALVEALKKVRKFF  402 (403)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999988765

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.96  E-value=5.7e-26  Score=219.00  Aligned_cols=319  Identities=14%  Similarity=0.179  Sum_probs=242.3

Q ss_pred             eeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-CC-cEEEecccH-HHHHHH
Q psy15447         81 PCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-LE-ETALYSFGF-STSASA  156 (457)
Q Consensus        81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~-~~i~~~sG~-~a~~~a  156 (457)
                      ..+|+++| |+++.  .|.+.+++.+.+..+...+         .+...++++.+++++| .+ ..++.+.|+ +.+...
T Consensus        23 ~~i~LssNenP~gp--~~~~~~~~~~~~~~~~rYP---------d~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l   91 (356)
T COG0079          23 GIIKLSSNENPYGP--PPKVIEAIRAALDKLNRYP---------DPDYRELRAALAEYYGVVDPENVLVGNGSDELIELL   91 (356)
T ss_pred             cceeecCCCCCCCC--CHHHHHHHHHHHHhhccCC---------CCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHH
Confidence            68999998 55554  4889999988877543221         2246889999999999 55 345555555 788888


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      +.+++.+||.|++..++|..+...++..|.+++.++..    |++.+.+.+.+           +.++|++++++||||.
T Consensus        92 ~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-----------~~~lv~i~nPNNPTG~  160 (356)
T COG0079          92 VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-----------KTKLVFLCNPNNPTGT  160 (356)
T ss_pred             HHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc-----------CCCEEEEeCCCCCCCC
Confidence            99999999999999999999999999999999988873    55555555543           4579999999999999


Q ss_pred             CCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        233 ICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       233 i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      ..+.++|.++++..  +.++|+||||.-.. +.   ....... .+.++ +++.||||++|.+|   ||+++++++++.+
T Consensus       161 ~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~---~~~~l~~-~~~nl-ivlRTfSKa~gLAGlRlGy~ia~~~~i~~l  234 (356)
T COG0079         161 LLPREELRALLEALPEGGLVVIDEAYIEFS-PE---SSLELLK-YPPNL-IVLRTFSKAFGLAGLRVGYAIANPELIAAL  234 (356)
T ss_pred             CCCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cc---hhhhhcc-CCCCE-EEEEecHHhhhcchhceeeccCCHHHHHHH
Confidence            99988888887754  88999999986421 11   1122222 23333 88999999998766   9999999999999


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      +....+|    +.+.++.+++.++++..+...+.++++.+.++++.+.|+.    .++.-+.++..+++.+.+++ .   
T Consensus       235 ~~vr~p~----~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~----~~~~~v~pS~aNFvlv~~~~-~---  302 (356)
T COG0079         235 NKVRPPF----NVSSPALAAAIAALRDADYLEESVERIREERERLYAALKA----LGLFGVFPSQANFVLVRVPD-A---  302 (356)
T ss_pred             HHhcCCC----CCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh----CCCCeecCCCCcEEEEECCC-c---
Confidence            8877666    5677788888888765544456778888999999999998    34331235668888888765 2   


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                          .+..+.+.|+++||+++.....    +...+++||++.   |++|.++++++|+++++.
T Consensus       303 ----~~~~l~~~L~~~giivR~~~~~----~~~~~~lRitvg---t~een~~ll~AL~~~~~~  354 (356)
T COG0079         303 ----EAAALAEALLKKGILVRDCSSV----GLLPGYLRITVG---TPEENDRLLAALREVLKG  354 (356)
T ss_pred             ----cHHHHHHHHHHCCEEEEeCCCC----CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence                2346899999999999976421    234679999997   799999999999988754

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.96  E-value=6.9e-26  Score=224.51  Aligned_cols=340  Identities=14%  Similarity=0.121  Sum_probs=236.3

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEE-ecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETAL-YSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~-~~sG~~a~~~  155 (457)
                      .++++..+.+ .+..++.+.+|+.+.+.....  ..+....|..+....+++.+++++|.    +..++ ++++++++..
T Consensus        28 ~~~~l~~g~~-~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~  104 (389)
T PRK05957         28 GTISLGQGVV-SYPPPPEAIEALNNFLANPEN--HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN  104 (389)
T ss_pred             CeEEccCCCC-CCCCCHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence            4577776543 344567888998887764322  22333467788899999999998884    33444 4555588888


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++.+++++||.|++..++|......+...|.++..++.+     |++++++.+++           ++++|++.+++||+
T Consensus       105 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~klv~~~~p~NPt  173 (389)
T PRK05957        105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP-----------KTRAIVTISPNNPT  173 (389)
T ss_pred             HHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc-----------CceEEEEeCCCCCC
Confidence            888889999999999998877777777888888776543     67888777642           45677788899999


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      |.+.|   +++|.++|++||+++|+||+|+...++.... ......+.  ....|++.||||.+|.+|   ||+++++++
T Consensus       174 G~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~  251 (389)
T PRK05957        174 GVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGS--GNHTISLYSLSKAYGFASWRIGYMVIPIHL  251 (389)
T ss_pred             CcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCc--cCcEEEEecchhhccCccceeEEEecCHHH
Confidence            99998   8889999999999999999997655442111 11111111  223588999999998776   999999999


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCe-EEeccCCCCeEEEEec
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~  381 (457)
                      ++.+......+  ..+.+.+...++..+++.-. ...+.+++++++.+.+.+.|++   ..++ .+..+..+.++|+.+.
T Consensus       252 ~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~~~~~gg~~~~~~~~  326 (389)
T PRK05957        252 LEAIKKIQDTI--LICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ---LQDRCTLHPANGAFYCFLKVN  326 (389)
T ss_pred             HHHHHHHHhhc--ccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh---cCCCccccCCCeeEEEEEeCC
Confidence            98887543222  22234445555555553200 0123556788888889898887   3443 4433444667788776


Q ss_pred             CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ...       ...+++++|. ++||.+.++..+.   ...++++|++++. .+++++++.++.|.+.++.+-
T Consensus       327 ~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~~~  387 (389)
T PRK05957        327 TDL-------NDFELVKQLIREYRVAVIPGTTFG---MKNGCYLRIAYGA-LQKATAKEGIERLVQGLKTIV  387 (389)
T ss_pred             CCC-------ChHHHHHHHHHHCCEEEccchhhC---CCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHhhh
Confidence            543       4567889987 5799999876432   1224689999965 478999999999988877654

>PRK09148 aminotransferase; Validated

Probab=99.96  E-value=5.1e-26  Score=226.44  Aligned_cols=349  Identities=13%  Similarity=0.081  Sum_probs=234.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a  152 (457)
                      .|+.++||..+++ .+...+.+.+++.+.+..-.  ...+....|..++...+++.+.+..|.    + .++++++++++
T Consensus        28 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a  104 (405)
T PRK09148         28 AGADIIDLGMGNP-DLPTPQHIVDKLCETAQDPR--THRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG  104 (405)
T ss_pred             cCCCeEEcCCCCC-CCCCCHHHHHHHHHHHcCcc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence            3677899987654 34445778888777664311  111222334555555555555444353    3 45555666789


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      +..++.+++++||.|++..++|..+...+...|.++..++..    +++++++.++...        ++++++++.+++|
T Consensus       105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~--------~~~~~v~l~~P~N  176 (405)
T PRK09148        105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI--------PKPIALIVNYPSN  176 (405)
T ss_pred             HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc--------ccceEEEEeCCCC
Confidence            999999999999999999999988887788889888877642    3456666665432        3557888888899


Q ss_pred             CCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447        229 NSADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       229 ~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      |+|.+.+.   ++|.++|++||+++|+||+|+...++...........-. .+..|+++||||.+|.+|   ||++++++
T Consensus       177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~-~~~~i~~~SfSK~~~~pGlR~G~~v~~~~  255 (405)
T PRK09148        177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGA-KDVTVEFTSMSKTFSMAGWRMGFAVGNER  255 (405)
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCc-cCcEEEEeccccccCCcchheeeeeCCHH
Confidence            99999994   688899999999999999998654432111111111111 233577899999998766   99999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +++.+........++  .+.+...++.+.++.-+. .+.+++.++++.+++.+.|++    .++.+..+..+.++|+.++
T Consensus       256 ~i~~l~~~~~~~~~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~f~~~~l~  329 (405)
T PRK09148        256 LIAALTRVKSYLDYG--AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGWDIPPPAASMFAWAPIP  329 (405)
T ss_pred             HHHHHHHHHHHhccC--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCccCCCCeeEEEEEECC
Confidence            998886543221222  244555555555532111 134567788889999999988    4666544556778888876


Q ss_pred             CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .....    ....++++.|+ ++||.+.++..+.   ....+++||++.  .++++++++++.|.+++.....
T Consensus       330 ~~~~~----~~~~~~~~~ll~~~gV~v~pg~~f~---~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~  393 (405)
T PRK09148        330 EAFRH----LGSLEFSKLLVEKADVAVAPGVGFG---EHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE  393 (405)
T ss_pred             CccCC----CCHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence            43100    02346777776 6799999876432   122578999986  5789999999999888876543

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.96  E-value=2.9e-26  Score=224.12  Aligned_cols=316  Identities=14%  Similarity=0.153  Sum_probs=229.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      .++|||+++++ .+..+|++++++.+++.... .++       ... ..++++.++++++.+  ++++++++++++..++
T Consensus        19 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~-~y~-------~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~   88 (346)
T TIGR01141        19 KEVIKLNSNEN-PFGPPPKAKEALRAEADKLH-RYP-------DPD-PAELKQALADYYGVDPEQILLGNGSDEIIELLI   88 (346)
T ss_pred             CceEEccCCCC-CCCCCHHHHHHHHHhHHHhh-cCC-------CCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHH
Confidence            47999998776 56667899999998875421 111       111 268999999999853  4555566668888888


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      .+++++||.|++..++|..........|.++..++.     .|++++++.+.           +++++|++++++||+|.
T Consensus        89 ~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~v~l~~p~NptG~  157 (346)
T TIGR01141        89 RAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-----------DKPKLVFLCSPNNPTGN  157 (346)
T ss_pred             HHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-----------CCCCEEEEeCCCCCCCC
Confidence            888999999999999988777677788888887764     36777777542           34577888899999999


Q ss_pred             CCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        233 ICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       233 i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      +.|++++.++|+.+  |+++|+||+|+.....  +. ........+  .+++++|+||++|.+|   ||+++++++++.+
T Consensus       158 ~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~--~~-~~~~~~~~~--~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~  232 (346)
T TIGR01141       158 LLSRSDIEAVLERTPEDALVVVDEAYGEFSGE--PS-TLPLLAEYP--NLIVLRTLSKAFGLAGLRIGYAIANAEIIDAL  232 (346)
T ss_pred             CCCHHHHHHHHHhCCCCcEEEEECchhhhcCC--cc-HHHHHhhCC--CEEEEehhhHhhhchhhhceeeecCHHHHHHH
Confidence            99999999999887  9999999998732211  11 111111111  2588999999997666   9999999999888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      +.....  +  +.+++.+.++.+.++......+.+++++++.+++++.|++   .+|+.+. +..+.++++.++.     
T Consensus       233 ~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~-~~~g~~~~~~~~~-----  299 (346)
T TIGR01141       233 NKVRAP--F--NLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKK---LPGLEVY-PSDANFVLIRFPR-----  299 (346)
T ss_pred             HhccCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEC-CCcCCEEEEecCC-----
Confidence            754322  2  3466666666666544322234677888899999999987   4577654 4567888887764     


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                          ...++.+.|.++||.+.++..+.    ...+++|++++   +++|+++++++|+
T Consensus       300 ----~~~~~~~~L~~~gI~v~~g~~f~----~~~~~iRls~~---~~~~i~~~~~~l~  346 (346)
T TIGR01141       300 ----DADALFEALLEKGIIVRDLNSYP----GLPNCLRITVG---TREENDRFLAALR  346 (346)
T ss_pred             ----CHHHHHHHHHHCCeEEEeCCCcC----CCCCeEEEecC---CHHHHHHHHHHhC
Confidence                13478899999999998876421    11578999975   8999999998874

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK08912 hypothetical protein; Provisional

Probab=99.96  E-value=7.3e-26  Score=224.44  Aligned_cols=337  Identities=17%  Similarity=0.160  Sum_probs=232.6

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~  154 (457)
                      ...+||..+.+ ....++.+.+++.+.+... .  ..+....|..++.+.+++.+.+..|.    + ++++++++++++.
T Consensus        26 ~~~i~l~~g~p-~~~~p~~~~~~~~~~~~~~-~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~  101 (387)
T PRK08912         26 HGAINLGQGFP-DDPGPEDVRRAAADALLDG-S--NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA  101 (387)
T ss_pred             CCeEEccCCCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH
Confidence            35788887654 3334577888877776541 1  12223345556666666666554452    3 5666777789999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      .++.+++++||.|+++.++|..+...+...|.++..++.+      |++++++.+..           +++++++.+++|
T Consensus       102 ~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~N  170 (387)
T PRK08912        102 AALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP-----------RTKAVLLNNPLN  170 (387)
T ss_pred             HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc-----------cceEEEEeCCCC
Confidence            9999999999999999999999988889999888766542      56777776632           346777778999


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      |+|.+.+   +++|.++|++||+++|+||+|+...++.. ...+....+.  .+.+++++||||.+|.+|   ||+++++
T Consensus       171 PtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~  248 (387)
T PRK08912        171 PAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGWKVGFVCAAP  248 (387)
T ss_pred             CcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCceeEEEecCH
Confidence            9999988   66789999999999999999976555321 1122222222  134699999999998766   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.+........++.  ++...+++.+.+....+ ..+.+++++++.+++.+.|++    .|+.+..+..+.++|+.+
T Consensus       249 ~~~~~l~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~g~~~l~~~l  322 (387)
T PRK08912        249 PLLRVLAKAHQFLTFTT--PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR----IGFPVLPSQGTYFLTVDL  322 (387)
T ss_pred             HHHHHHHHHHhhccccC--ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCcceEEEecc
Confidence            99988865443333333  44444444444421111 134678888999999999988    477665445566778777


Q ss_pred             cC---CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        381 QK---SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       381 ~~---~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +.   ..       ...++++.|+ ++||.+.++..+... ....+++|++++.  .++++++.++.|+++++
T Consensus       323 ~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~-~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l~  385 (387)
T PRK08912        323 APLGLAE-------DDVAFCRRLVEEAGVAAIPVSAFYEE-DPVTSVVRFCFAK--RDATLDEAVERLAAARR  385 (387)
T ss_pred             cccCCCC-------CHHHHHHHHHhcCCEEEecchhhCCC-CCCCCEEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            54   12       3457888876 469999987643210 1235799999985  58999999999988765

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.96  E-value=7.9e-26  Score=223.80  Aligned_cols=333  Identities=15%  Similarity=0.196  Sum_probs=225.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~a  156 (457)
                      .++||+.+++ .+...+.+.+++.+.+... .  ..+....|..++.+.+++.+.+..|    .+.+++++++++++..+
T Consensus        30 ~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~-~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~  105 (384)
T PRK06348         30 DIIDLSLGDP-DLITDESIINAAFEDAKKG-H--TRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA  105 (384)
T ss_pred             CcEEcCCCCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence            4688887654 3444567776665544331 1  1122233444444455554443323    34566677777899999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      +.+++++||.|+++.++|..+...+...|.++..++.       .|++++++.++.           ++++|++++++||
T Consensus       106 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p~NP  174 (384)
T PRK06348        106 LQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS-----------KTKAIILNSPNNP  174 (384)
T ss_pred             HHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc-----------CccEEEEeCCCCC
Confidence            9999999999999999999999888888988777652       367888777642           3456666789999


Q ss_pred             CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      +|.+.+   +++|.++|++||+++|+||+|+...++.....+....+. ++ ..|+++||||.+|.+|   ||+++++++
T Consensus       175 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~-~vi~~~SfSK~~~l~GlRiG~~v~~~~~  252 (384)
T PRK06348        175 TGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGM-PE-RTITFGSFSKDFAMTGWRIGYVIAPDYI  252 (384)
T ss_pred             CCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCC-cC-cEEEEecchhccCCccccceeeecCHHH
Confidence            999988   678888899999999999999865554321111121121 22 3589999999998655   999999998


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      ++.+........++  .+++...++..++...++ .+++++.++++.+++.+.|++   .+++.+..+.++.++|+.++.
T Consensus       253 ~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~---~~~~~~~~p~gg~~~~~~~~~  327 (384)
T PRK06348        253 IETAKIINEGICFS--APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES---IPNLSLHPPKGSIYAFINIKK  327 (384)
T ss_pred             HHHHHHHHHhccCC--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCceeccCCeeEEEEEeccc
Confidence            88876543322333  366666666666543221 124566778888889898887   456666544456677887763


Q ss_pred             -CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        383 -SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       383 -~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                       ..       ...++++.|++ +||.+.++..+.   ....+++|++++  .++++++++++.|+++
T Consensus       328 ~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~al~~l~~~  382 (384)
T PRK06348        328 TGL-------SSVEFCEKLLKEAHVLVIPGKAFG---ESGEGYIRLACT--VGIEVLEEAFNRIEKM  382 (384)
T ss_pred             CCC-------CHHHHHHHHHHhCCEEEcCchhhc---cCCCCeEEEEec--CCHHHHHHHHHHHHhh
Confidence             22       34578888864 699999876532   123579999986  4889999999888653

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.96  E-value=7.5e-26  Score=226.95  Aligned_cols=338  Identities=16%  Similarity=0.162  Sum_probs=235.0

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC-CCCc-ccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG-PRGF-YGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~-~~~~-~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~  154 (457)
                      .-|+|.++.   +. ..+.+.+++.+.+.++...+.. .... .-..+...++++.+++++|.+   .+++++++++++.
T Consensus        33 ~iyLd~a~~---~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~  108 (424)
T PLN02855         33 LVYLDNAAT---SQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAIN  108 (424)
T ss_pred             eEEeeCccc---cC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHH
Confidence            346666543   22 3467999998888765432211 1110 012345678999999999963   4566667778888


Q ss_pred             HHHHh----hcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        155 SAIAA----YVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       155 ~ai~a----~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++.+    ..++||.|++....|.+....    .+..|.++..++.+     |++++++.+.+           ++++|
T Consensus       109 ~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-----------~t~lv  177 (424)
T PLN02855        109 LVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-----------KTKLV  177 (424)
T ss_pred             HHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-----------CceEE
Confidence            77765    357899999999888765433    34567787776542     67788877742           45788


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~  300 (457)
                      ++.+++|++|.+.|+++|.++|+++|+++++|++|+.|...         .++...++|+++.|++|.+|+.| |+++.+
T Consensus       178 ~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~  248 (424)
T PLN02855        178 ATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMP---------VDVQTLGADFLVASSHKMCGPTGIGFLWGK  248 (424)
T ss_pred             EEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CCchhcCCCEEEeecccccCCCccEEEEEc
Confidence            99999999999999999999999999999999999765421         12222346899999999777665 899888


Q ss_pred             HHHHHHHHhhCCc------------------cee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcc
Q psy15447        301 SYIIEHHRLSGSG------------------YCF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       301 ~~~~~~~~~~~~~------------------~~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      +++++.+.....+                  ..| .++.+....++..++++.+.+.  +...++.+++.+++++.|++ 
T Consensus       249 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~-  327 (424)
T PLN02855        249 SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS-  327 (424)
T ss_pred             hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-
Confidence            8877665322100                  001 1234445555556778776553  45677888899999999987 


Q ss_pred             cccCCeEEeccC------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCcc---ccCCCCCeEEEEec
Q psy15447        360 KVTQRFLVQGHR------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQ---EAKKQKPSIRITCN  429 (457)
Q Consensus       360 ~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~---~~~~~~~~lRi~~~  429 (457)
                        ++++++.++.      .++++.+.+...        ...++.+.|.++ ||.++.+.++..   .....++.+|++++
T Consensus       328 --~~g~~i~~~~~~~~~~r~~~v~~~~~~~--------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~  397 (424)
T PLN02855        328 --VPGVRIYGPKPSEGVGRAALCAFNVEGI--------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLY  397 (424)
T ss_pred             --CCCEEEeCCCcccccCcccEEEEEECCc--------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEec
Confidence              5688876532      245777776542        345788899887 999987654321   00112468999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        430 ISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..+|++|+++++++|+++++.++
T Consensus       398 ~ynt~~di~~l~~~l~~~~~~~~  420 (424)
T PLN02855        398 FYNTKEEVDAFIHALKDTIAFFS  420 (424)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987653

>PRK02948 cysteine desulfurase; Provisional

Probab=99.96  E-value=3.5e-26  Score=226.40  Aligned_cols=325  Identities=14%  Similarity=0.080  Sum_probs=224.3

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCC-c-EEEecccHHHHHHHHHhhc----CCCCEEE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLE-E-TALYSFGFSTSASAIAAYV----KRNDAVF  168 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~-~-~i~~~sG~~a~~~ai~a~~----~~gd~v~  168 (457)
                      ++.+.+++.+.++.+...+.+.. ......+..+++++.+++++|.+ . +++++++++++..++.++.    ++|+.|+
T Consensus        13 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv   92 (381)
T PRK02948         13 SKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHII   92 (381)
T ss_pred             CHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEE
Confidence            57899999988876543322111 11122467788999999999843 3 4455566789888887764    5789999


Q ss_pred             EeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447        169 VDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL  240 (457)
Q Consensus       169 ~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~  240 (457)
                      ++...|++....   ++..|.++..++.     .|++++++.+++           ++++|++++++|++|.+.|+++|.
T Consensus        93 ~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----------~~~lv~~~~~~n~tG~~~~~~~I~  161 (381)
T PRK02948         93 TTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP-----------DTVLASIQHANSEIGTIQPIAEIG  161 (381)
T ss_pred             ECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC-----------CCEEEEEECCcCCcEeehhHHHHH
Confidence            999888876554   4556777776653     378888877742           457999999999999999999999


Q ss_pred             HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHH-HHHHHhh---CCcce
Q psy15447        241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYI-IEHHRLS---GSGYC  315 (457)
Q Consensus       241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~-~~~~~~~---~~~~~  315 (457)
                      ++|+++|+++++|+++++|..+.         ++...++|+++.|++|.+|+.| |+++.++++ .......   ..++.
T Consensus       162 ~l~~~~~~~vivD~~~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~  232 (381)
T PRK02948        162 ALLKKYNVLFHSDCVQTFGKLPI---------DVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPGTTHEKGFR  232 (381)
T ss_pred             HHHHHcCCEEEEEChhhcccccc---------CcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccCCCCCCCcC
Confidence            99999999999999998765421         1222356899999999998765 777776653 1111100   11112


Q ss_pred             ecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEEEEecCCcchHHH
Q psy15447        316 FSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~i~~~~~~~~~~~  389 (457)
                       .++.+..+.+++.++++.+ +..++.+++++++.+++++.|++    .++++.... .    ..++.+.+..-      
T Consensus       233 -~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~v~~~~~~~~~~~~i~~~~~~~~------  301 (381)
T PRK02948        233 -PGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQT----LPLPIEVEGHSTSCLPHIIGVTIKGI------  301 (381)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCEEEeCCCccCcCCEEEEEeCCC------
Confidence             2345677777777777765 33356778999999999999988    344332111 1    22333443321      


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                        ...++...|.++||.++.+..|....              +...+++|++++..+|++|+++++++|+++++.+..
T Consensus       302 --~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~  377 (381)
T PRK02948        302 --EGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR  377 (381)
T ss_pred             --CHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence              23457778888999999765432100              112478999999999999999999999998877654

>PRK07777 aminotransferase; Validated

Probab=99.96  E-value=8.7e-26  Score=223.89  Aligned_cols=337  Identities=16%  Similarity=0.141  Sum_probs=226.5

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-----cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-----ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sG~~a~~  154 (457)
                      .+++||..+.+ .....+.+.+++.+.+.. ..  ..+....|..++.+.+++.+.+.+|.+     +++++++|++|+.
T Consensus        24 ~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~-~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~   99 (387)
T PRK07777         24 TGAVNLGQGFP-DEDGPPEMLEAAQEAIAG-GV--NQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIA   99 (387)
T ss_pred             CCeEEccCCCC-CCCCCHHHHHHHHHHHhc-CC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            35788887654 333456677777776654 11  112222345555555555555555642     4677777889999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      .++.+++++||.|++..++|..+...+...|.++..++.        .|++++++.+.+           ++++|+++++
T Consensus       100 ~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l~~p  168 (387)
T PRK07777        100 AAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP-----------RTRALIVNSP  168 (387)
T ss_pred             HHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc-----------ccEEEEEcCC
Confidence            999999999999999999999888888888888776653        356777776632           3467778889


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||+|.+.+   +++|.++|++||+++|+||+|+...+.. ....+....+.  .+.+|+++||||.+|.+|   ||+++
T Consensus       169 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~  246 (387)
T PRK07777        169 HNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGM--RERTVTISSAAKTFNVTGWKIGWACG  246 (387)
T ss_pred             CCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCC--cCcEEEEeechhhccCcCceeEEEec
Confidence            999999987   7799999999999999999997655422 11122221111  234799999999998666   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.+........++.+ ++. ..++...+...+ ..+.+++.++++.+.+.+.|++    .++.+..+..+.++|+
T Consensus       247 ~~~l~~~~~~~~~~~~~~~~-~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~g~~~~~~  320 (387)
T PRK07777        247 PAPLIAAVRAAKQYLTYVGG-APF-QPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE----AGFEVHDSAGTYFLCA  320 (387)
T ss_pred             CHHHHHHHHHHHhhcccCCC-CHH-HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh----CCCCccCCCcceEEEe
Confidence            99988877654322223222 332 233333332111 1134667888999999999988    4666554445666776


Q ss_pred             EecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        379 YLQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       379 ~~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++.  ..       ...+++++|+ ++||.+.++..+....+...+++||++..  +++++++.++.|+++.
T Consensus       321 ~~~~~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        321 DPRPLGYD-------DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALR  384 (387)
T ss_pred             cccccCCC-------CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence            6542  11       3457899997 56999998764321112235689999964  7999999999998764

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.96  E-value=1.9e-25  Score=221.60  Aligned_cols=341  Identities=12%  Similarity=0.097  Sum_probs=232.4

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~  154 (457)
                      ..+|||..+.+ .+...+.+.+++.+.+... ..  .+....|..++.+.+++.+....|.     +++++++++++++.
T Consensus        30 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~  105 (391)
T PRK07309         30 PGILKLTLGEP-DFTTPDHVKEAAKRAIDAN-QS--HYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALS  105 (391)
T ss_pred             CCeEEcCCCCC-CCCCCHHHHHHHHHHHhcC-CC--CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence            45889987654 3444677888888777542 11  1212234444444444444433342     35666777789999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      .++.+++++||.|++..+.|......++..|.++..++.      .|++.+++.+++..        ++++++++.+++|
T Consensus       106 ~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~--------~~~~~i~l~~P~N  177 (391)
T PRK07309        106 ASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQG--------DKLKAVILNYPAN  177 (391)
T ss_pred             HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccC--------CCeEEEEEECCCC
Confidence            999999999999999999999888888888988877753      26788888876432        3456777788899


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      |+|.+.+   +++|.++|++||+++|+||+|+...+ +.....+..   ..+++ .|+++||||.+|.+|   ||+++++
T Consensus       178 PtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~---~~~~~-~i~~~S~SK~~g~~GlRvG~~v~~~  253 (391)
T PRK07309        178 PTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAE---YLPDQ-TILINGLSKSHAMTGWRIGLIFAPA  253 (391)
T ss_pred             CCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHH---hccCC-EEEEecChhhccCccceeEEEEeCH
Confidence            9999887   78899999999999999999986554 221111111   12233 488999999998766   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.+.... .+... +.+++...++.+.++.-.. ....+++++++.+++.+.|++    .++.+..+..+.++|+.+
T Consensus       254 ~~~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg~~~~~~l  327 (391)
T PRK07309        254 EFTAQLIKSH-QYLVT-AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKPDGAFYIFAKI  327 (391)
T ss_pred             HHHHHHHHHH-hhccc-CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeEEEEEEC
Confidence            9988886542 22222 2355555555555532111 123467778888899999988    467665444566677776


Q ss_pred             cCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        381 QKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.....     ...++++.+ .++||.+.++..+.   ....+++|++++.  +.+++++++++|++++++..
T Consensus       328 ~~~~~~-----~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~~  390 (391)
T PRK07309        328 PAGYNQ-----DSFKFLQDFARKKAVAFIPGAAFG---PYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEHA  390 (391)
T ss_pred             CCCCCC-----CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhhc
Confidence            542100     234677665 46799998876432   2235799999874  68999999999999887654

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.96  E-value=5.8e-26  Score=224.17  Aligned_cols=316  Identities=13%  Similarity=0.120  Sum_probs=227.3

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcC----CCCEEE
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVK----RNDAVF  168 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~----~gd~v~  168 (457)
                      .+|.+.+++.+++.... +  .+..+.+..+...++++.+++++|.+  ..+++++|++++..++.++..    +++.|+
T Consensus        32 ~~~~~~~a~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl  108 (371)
T PRK13520         32 PHPIARKAHEMFLETNL-G--DPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIV  108 (371)
T ss_pred             chHHHHHHHHHHHhcCC-C--CcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEE
Confidence            57999999999887631 1  12223456677789999999999975  357888999999999877654    578999


Q ss_pred             EeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHH
Q psy15447        169 VDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR  243 (457)
Q Consensus       169 ~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~  243 (457)
                      +....|.+....++..|.++..++.     .|++++++.+++           ++++|++..+.+++|.+.|+++|.++|
T Consensus       109 ~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~vi~~~~~~~tG~~~~l~~I~~l~  177 (371)
T PRK13520        109 VPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD-----------NTIGIVGIAGTTELGQVDPIPELSKIA  177 (371)
T ss_pred             ecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh-----------CCEEEEEEcCCcCCcccCCHHHHHHHH
Confidence            9999999988888888888887764     378999988864           234555555667899999999999999


Q ss_pred             HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cc-cEEEecHHHHHHHHhhCCccee----
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VG-GFCVGSSYIIEHHRLSGSGYCF----  316 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~g-G~v~~~~~~~~~~~~~~~~~~~----  316 (457)
                      ++||+++++|++|+.+.++....+  ..++....++|.+..|.+|+.+.  ++ ++++.++++++.+.. ..++.+    
T Consensus       178 ~~~g~~livD~a~~~~~~~~~~~~--~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~  254 (371)
T PRK13520        178 LENGIFLHVDAAFGGFVIPFLDDP--PNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAV-DTPYLTSKKQ  254 (371)
T ss_pred             HHcCCCEEEEecchhHHHHhhcCC--CCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcc-cCccccCCCC
Confidence            999999999999986653211111  01222224568888889997532  33 455567767776542 122211    


Q ss_pred             ---cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447        317 ---SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK  391 (457)
Q Consensus       317 ---~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  391 (457)
                         .++.++..++++.++++.+.+.  ++++++..++++++.+.|++    .|+++...+..+++.+.+++         
T Consensus       255 ~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~v~~~~~~---------  321 (371)
T PRK13520        255 ATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKE----RGFEPVIEPVLNIVAFDDPN---------  321 (371)
T ss_pred             cceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHh----CCCEEecCCCceEEEEecCC---------
Confidence               2223445567777788766443  34778889999999999988    47763334456676665542         


Q ss_pred             HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                       ..++.++|.++||.++....        .+++|++++..+|++|+++++++|+++++
T Consensus       322 -~~~v~~~L~~~gi~v~~~~~--------~~~iRis~~~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        322 -PDEVREKLRERGWRVSVTRC--------PEALRIVCMPHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             -HHHHHHHHHHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence             34788999999999876432        36899999888999999999999998764

>PRK10534 L-threonine aldolase; Provisional

Probab=99.96  E-value=1.1e-26  Score=225.84  Aligned_cols=320  Identities=13%  Similarity=0.167  Sum_probs=218.1

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhc
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYV  161 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~  161 (457)
                      +|||+||...+  .+|.+.+++.+.....        ..|+..+...+|+++|++++|.+.++++++|++++..++.+++
T Consensus         1 ~~~~~~~~~~~--p~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~   70 (333)
T PRK10534          1 MIDLRSDTVTR--PSRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC   70 (333)
T ss_pred             CcccccccCCC--CCHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc
Confidence            47999986555  4789999887644321        1244567889999999999999999999999999998888889


Q ss_pred             CCCCEEEEeCcccHHHHH--HHHhcC-CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447        162 KRNDAVFVDENINFAIQT--GLIASR-CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI  233 (457)
Q Consensus       162 ~~gd~v~~~~~~h~~~~~--~~~~~g-~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i  233 (457)
                      .+||.|+++.++|.....  +....+ .+...++.     .|++++++.+.+...     +..++++|+++++.  +|.+
T Consensus        71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-----~~~~~~lv~l~np~--~G~v  143 (333)
T PRK10534         71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI-----HFARTRLLSLENTH--NGKV  143 (333)
T ss_pred             CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc-----CcccceEEEEecCC--CCee
Confidence            999999988887754332  123333 45555532     268888777743110     00135677777544  5999


Q ss_pred             CChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-ccEEEecHHHHHHHHh
Q psy15447        234 CPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEHHRL  309 (457)
Q Consensus       234 ~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-gG~v~~~~~~~~~~~~  309 (457)
                      .|.+   +|.++|++||++|++||+|.++..+..+....   .+. ...|.++.||||++|.+ |||+++++++++.++.
T Consensus       144 ~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~---~~~-~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~~~  219 (333)
T PRK10534        144 LPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELK---EIT-QYCDSFTICLSKGLGTPVGSLLVGNRDYIKRARR  219 (333)
T ss_pred             cCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHH---HHH-hcCCEEEEEeEcCCCCcccceEEcCHHHHHHHHH
Confidence            8855   55678999999999999976542211111111   110 11244456899999864 5578899999988865


Q ss_pred             hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      ....+.+..+.+..+++++.++++..   .+.+++.+++++++.+.|++    .|+++. ++.++++++.++..      
T Consensus       220 ~~~~~~~~~~~~~~~~a~~~~~l~~~---~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~~nfv~~~~~~~------  285 (333)
T PRK10534        220 WRKMTGGGMRQAGILAAAGLYALKHN---VARLQEDHDNAAWLAEQLRE----AGADVM-RQDTNMLFVRVGEE------  285 (333)
T ss_pred             HHHHhCCchhhHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHh----CCCccC-CCCceEEEEECCch------
Confidence            43222212223445556666666432   23445556677899999998    577765 45688888877632      


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                        ...++.+.|+++||.+++.           ..+|++.+..+|++++++++++|++++.
T Consensus       286 --~~~~~~~~l~~~gi~v~~~-----------~~~rl~~~~r~t~e~~~~~~~~l~~~~~  332 (333)
T PRK10534        286 --QAAALGEYMRERNVLINAS-----------PIVRLVTHLDVSREQLAEVVAHWRAFLA  332 (333)
T ss_pred             --hHHHHHHHHHHcCeeecCC-----------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence              3457788999999999754           2589988877899999999999987653

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.96  E-value=3.6e-26  Score=227.98  Aligned_cols=339  Identities=15%  Similarity=0.138  Sum_probs=227.1

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHH----HHHHHHhhcCCCcE-EEecccHHH
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLD----LENDIASFMGLEET-ALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~~-i~~~sG~~a  152 (457)
                      +++|++. +.+++    +|++++++.+.+ .+|+.+..+++.+.| .+...+    .++.+++++|.+.. +++++|++|
T Consensus        19 ~~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a   93 (402)
T cd00378          19 RETLELIASENFT----SPAVMEAMGSDLTNKYAEGYPGKRYYGG-CEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA   93 (402)
T ss_pred             HhCeeeeccCCcC----CHHHHHHhcccccccccCCCCCCcccCC-chHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence            4567764 44553    689999998776 577766666665444 333333    34457789998765 555789999


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHH-----HHhcCCeEEE--ecCC------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTG-----LIASRCKVQY--FKHN------NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~-----~~~~g~~~~~--~~~~------d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      +..++.+++++||.|+++.+.|.+....     +...|.++..  ++.+      |++++++.+.+          .+++
T Consensus        94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~----------~~~~  163 (402)
T cd00378          94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALE----------FKPK  163 (402)
T ss_pred             HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHh----------CCCC
Confidence            9999999999999999999888654322     4445654433  3333      78999988864          2334


Q ss_pred             EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEE
Q psy15447        220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCV  298 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~  298 (457)
                      ++++.++.  .|...++++|.++|++||+++|+||+|..|..+. |. ...  .+  ..+|++++|++|++ |..||+++
T Consensus       164 ~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~-g~-~~~--~~--~~~dv~~~s~sK~l~G~~gg~i~  235 (402)
T cd00378         164 LIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAG-GV-FPN--PL--PGADVVTTTTHKTLRGPRGGLIL  235 (402)
T ss_pred             EEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhc-cc-CCC--cc--cCCcEEEeccccCCCCCCceEEE
Confidence            55554443  3567799999999999999999999986665432 11 110  11  13488999999999 66789888


Q ss_pred             ecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHH-HHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCC
Q psy15447        299 GSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALH-LLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTP  374 (457)
Q Consensus       299 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~  374 (457)
                      +++ ++++.++.....+.+++...+.. +++..++. ... ..++++++++++.+++.+.|++    .|+.+.. +..++
T Consensus       236 ~~~~~~~~~l~~~~~~~~~~~~~~~~~-~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~  310 (402)
T cd00378         236 TRKGELAKKINSAVFPGLQGGPHLHVI-AAKAVALKEALEPEFKAYAKQVVENAKALAEALKE----RGFKVVSGGTDNH  310 (402)
T ss_pred             eccHHHHHHHHHHhCccccCCchHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh----CCCeEeecCCCCe
Confidence            876 88888765443333333222233 33223333 332 2245778899999999999988    4776642 34678


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-CCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHH
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-KKQKPSIRITCNI----SHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~  449 (457)
                      ++++.+.....      ....+.+.|.++||.+.+..+|.... +...+.+|++++.    .++++|++++++.|++++.
T Consensus       311 ~v~v~~~~~~~------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~  384 (402)
T cd00378         311 LVLVDLRPKGI------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             EEEEeCCccCC------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            88888763210      23456677888899998765554311 1134689998876    3579999999999999876


Q ss_pred             Hhc
Q psy15447        450 IAV  452 (457)
Q Consensus       450 ~~~  452 (457)
                      +-.
T Consensus       385 ~~~  387 (402)
T cd00378         385 DAE  387 (402)
T ss_pred             ccc
Confidence            543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.96  E-value=9.9e-26  Score=223.73  Aligned_cols=336  Identities=13%  Similarity=0.160  Sum_probs=228.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSAS  155 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~  155 (457)
                      ..++||..+.+ .+..++.+.+++.+.+......   +....|..++.+.+++.+.+.+|    .+.+++++++++++..
T Consensus        33 ~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~  108 (391)
T PRK08361         33 ENVISLGIGEP-DFDTPKNIKEAAKRALDEGWTH---YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYL  108 (391)
T ss_pred             cCeEEcCCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHH
Confidence            45788887654 3434678888888877642111   11122343444444444333334    2456777777899999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      ++.+++++||.|+++.++|..+...+...|.++..++.       .|++++++.+..           +++++++++++|
T Consensus       109 ~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~i~~p~N  177 (391)
T PRK08361        109 AFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK-----------RTRMIVINYPNN  177 (391)
T ss_pred             HHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----------ccEEEEEeCCCC
Confidence            99999999999999999999988888888988887764       367788777643           346777778899


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      |+|.+.|   +++|.++|+++++++|+||+|+...+... . ........+ +.+++++|+||.+|.+|   ||++++++
T Consensus       178 PtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~-~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG~~~~~~~  254 (391)
T PRK08361        178 PTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA-K-HYPMIKYAP-DNTILANSFSKTFAMTGWRLGFVIAPEQ  254 (391)
T ss_pred             CCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC-C-CCCHhhcCC-CCEEEEecCchhcCCcHhhhhhhccCHH
Confidence            9999999   78899999999999999999976544221 1 111112222 24689999999998766   99999998


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +++.+........  .+.+.+...++.+.++.-.   ..+..++.++++.+.+.+.|++   .+++.+..+.++.++|+.
T Consensus       255 ~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~~~~~~~p~g~~~~~~~  329 (391)
T PRK08361        255 VIKDMIKLHAYII--GNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE---MPHIKVFEPKGAFYVFAN  329 (391)
T ss_pred             HHHHHHHHHhhhc--cCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCEEEEEEEE
Confidence            8887754322111  2335555555555553211   1124567778888888898887   457776545556677777


Q ss_pred             ecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        380 LQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       380 ~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.. ..       ...++++.|++ +||.+.++..+.   ...++++|+++..  +++++++.++.|+++++.
T Consensus       330 l~~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        330 IDETGM-------SSEDFAEWLLEKARVVVIPGTAFG---KAGEGYIRISYAT--SKEKLIEAMERMEKALEE  390 (391)
T ss_pred             CCCCCC-------CHHHHHHHHHHhCCEEEcCchhhC---CCCCCEEEEEecC--CHHHHHHHHHHHHHHHhc
Confidence            763 22       34567888865 799999876431   1235799999874  788999999999887754

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.96  E-value=7.7e-26  Score=223.44  Aligned_cols=318  Identities=17%  Similarity=0.165  Sum_probs=226.0

Q ss_pred             ChhhHHHHHHHHHhcCCCCCC-C-CCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcC---CCCEE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCG-P-RGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVK---RNDAV  167 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~-~-~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~---~gd~v  167 (457)
                      .+.+.+++.+.+..+...+.. . .......+...++++.+++++|.+   .+++++++++++..++.++..   +||.|
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~v   91 (373)
T cd06453          12 PQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEI   91 (373)
T ss_pred             CHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEE
Confidence            477888888888665332211 1 111223466778999999999966   566777888999989888876   89999


Q ss_pred             EEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHH
Q psy15447        168 FVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKD  238 (457)
Q Consensus       168 ~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~  238 (457)
                      ++..+.|++...    ..+..|.++..++.+     |++++++.+.+           ++++|++.++++++|.+.|+++
T Consensus        92 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~~~tG~~~~~~~  160 (373)
T cd06453          92 VTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-----------RTKLVAVTHVSNVLGTINPVKE  160 (373)
T ss_pred             EECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-----------CceEEEEeCcccccCCcCCHHH
Confidence            999999987532    234568888777654     78888887753           4578889999999999999999


Q ss_pred             HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc----
Q psy15447        239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG----  313 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~----  313 (457)
                      |.++|++||++|++|++++.|....         .+...++|+++.|++|++++.| |++++++++++.++....+    
T Consensus       161 i~~~~~~~~~~li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~  231 (373)
T cd06453         161 IGEIAHEAGVPVLVDGAQSAGHMPV---------DVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMI  231 (373)
T ss_pred             HHHHHHHcCCEEEEEhhhhcCceee---------eccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcc
Confidence            9999999999999999988654321         1111245899899999998654 8898998887766432111    


Q ss_pred             --------------ceec-CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCC
Q psy15447        314 --------------YCFS-ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTP  374 (457)
Q Consensus       314 --------------~~~~-~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~  374 (457)
                                    ..|. ++.+.....+..++++.+.+.  +++.++.+++.+++.+.|++   .+++++..+  ..++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~  308 (373)
T cd06453         232 EEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSE---IPGVRVYGDAEDRAG  308 (373)
T ss_pred             ccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCccccCC
Confidence                          0121 223444444445567766643  45677788889999999988   457777532  2366


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      ++.+.++..        ...++.+.|.++||.+.++.++..   ......+.+|++++..+|++|+|+++++|
T Consensus       309 ~~~~~~~~~--------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         309 VVSFNLEGI--------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             eEEEEECCc--------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence            777776542        345788999999999876654321   00112468999999999999999999874

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.95  E-value=9.2e-26  Score=225.89  Aligned_cols=339  Identities=15%  Similarity=0.133  Sum_probs=227.2

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCCcE-EEecccHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLEET-ALYSFGFSTS  153 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~-i~~~sG~~a~  153 (457)
                      +.++++.+++..   -+|.+++++.+.+ .+|+.++.+++...| .+....+++    .+++++|.+.. ++++||++|+
T Consensus        25 ~~~~~l~~~~n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al  100 (416)
T PRK00011         25 EEHIELIASENF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQAN  100 (416)
T ss_pred             hcCeeeecccCc---CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCCCceeeecCCchHHH
Confidence            567887765322   3689999987775 356656655555444 334555555    88999998766 6667899999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHH---HH--HhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQT---GL--IASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~---~~--~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ..++.+++++||.|+++.+.|.+...   ..  ...|.++..++      ..|++++++.+++.          ++++|+
T Consensus       101 ~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~k~v~  170 (416)
T PRK00011        101 AAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH----------KPKLII  170 (416)
T ss_pred             HHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc----------CCCEEE
Confidence            99999999999999999998865321   11  12234555544      24789999888641          234555


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec-
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS-  300 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~-  300 (457)
                      +.+  +..|...|+++|.++|++||+++|+|++|+.|..+. |. ..  ..+  ..+|++++|++|++ |+.||+++++ 
T Consensus       171 ~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~-g~-~~--~~~--~~~di~~~S~~K~l~g~~gg~i~~~~  242 (416)
T PRK00011        171 AGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA-GV-HP--SPV--PHADVVTTTTHKTLRGPRGGLILTND  242 (416)
T ss_pred             ECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhccccc-Cc-cC--CCC--CCCcEEEecCCcCCCCCCceEEEeCC
Confidence            532  234667899999999999999999999998765542 11 00  111  14589999999999 5678999885 


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEec-cCCCCeEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HRDTPLKYL  378 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~i  378 (457)
                      +++++.++.....+.+++...+..++...+.++.+++. ++++++++++++++++.|++    .|+.+.. ...++++++
T Consensus       243 ~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~i  318 (416)
T PRK00011        243 EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAE----RGFRVVSGGTDNHLVLV  318 (416)
T ss_pred             HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCCeeeecCCCCeEEEE
Confidence            68888876554433333322333333334444444333 56788999999999999998    5776642 234577777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+.+..      ....++.+.|.++||.+.....|.. ..+..++.+|++..    ..+|++|+++++++|++++..
T Consensus       319 ~~~~~~------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        319 DLRSKG------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN  389 (416)
T ss_pred             eCcccC------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence            775321      0234688888899999875332211 11223457999653    257899999999999998764

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.95  E-value=1.8e-25  Score=221.96  Aligned_cols=334  Identities=15%  Similarity=0.151  Sum_probs=219.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~  153 (457)
                      |++++||..+++.. ..++++.+++.+.+.....  ..+....|..++..++++.+.+..|    .+. +++++++++++
T Consensus        34 g~~~i~l~~g~p~~-~~p~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al  110 (394)
T PRK05942         34 GLDLIDLGMGNPDG-AAPQPVIEAAIAALADPQN--HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL  110 (394)
T ss_pred             CCCeEEcCCCCCCC-CCCHHHHHHHHHHHhCCCC--ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence            56789998776533 3345677777776653211  1122223444445555555444334    233 44556667899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..++|......+...|.++..++.       .|++++++.+.           ++++++++.++
T Consensus       111 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k~i~l~~P  179 (394)
T PRK05942        111 THLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-----------QQAKILYFNYP  179 (394)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-----------ccceEEEEcCC
Confidence            9999999999999999999999888777888888877653       25677776663           24567777788


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      +||||.+.+   +++|.++|++||+++|+||+|+...+... ...+....+.  .+..|+++||||.+|.+|   ||+++
T Consensus       180 ~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~~GlRiG~i~~  257 (394)
T PRK05942        180 SNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGA--KDIGVEFHTLSKTYNMAGWRVGFVVG  257 (394)
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCc--cccEEEEecchhccCChhhheeeeec
Confidence            999999998   77899999999999999999976544211 1111111111  234588899999998766   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++++++.++.......+  +.+.....++.++++..++ .++.+++++++.+++.+.|++    .++.+..+..+.++|+
T Consensus       258 ~~~l~~~l~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~f~~~  331 (394)
T PRK05942        258 NRHIIQGLRTLKTNLDY--GIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGWNIPPTKATMYLWV  331 (394)
T ss_pred             CHHHHHHHHHHHhhccc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCeeeEEEE
Confidence            99999888754322222  2344555555556543222 134677888888899999987    4776654445557788


Q ss_pred             EecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++...       ...++..++ .++||.+.++..+.   ....+++|++++  ...+.+.+.++.|.+
T Consensus       332 ~~~~~~-------~~~~~~~~~l~~~gV~v~~g~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l~~  388 (394)
T PRK05942        332 PCPVGM-------GSTDFALNVLQKTGVVVTPGNAFG---EGGEGYVRISLI--ADCDRLGEALDRLKQ  388 (394)
T ss_pred             ECCCCC-------CHHHHHHHHHHHCCEEEeCChhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence            876533       234566554 46799998865431   123579999996  345555555555543

>PRK08960 hypothetical protein; Provisional

Probab=99.95  E-value=2e-25  Score=221.29  Aligned_cols=333  Identities=11%  Similarity=0.068  Sum_probs=223.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~  154 (457)
                      |.+++++..+.+ ++...+.+.+++.+.+......   +....|..+..+.+++.+.+..|    .+++++++++++++.
T Consensus        31 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~  106 (387)
T PRK08960         31 GHDVIHLEIGEP-DFTTAEPIVAAGQAALAAGHTR---YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL  106 (387)
T ss_pred             CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhcCCCc---cCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence            456788887655 4445688999998888642111   11123444444444444433223    345677777889999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|++..+.|......+...|.++..++.       .|++++++.+++           +++++++.+++
T Consensus       107 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~~p~  175 (387)
T PRK08960        107 LASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA-----------DTVGALVASPA  175 (387)
T ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc-----------cceEEEEECCC
Confidence            999999999999999999999988888888888776653       256777776643           34566777789


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +.+|+++|++||+++|+||+|....++....   ......+ + .++++||||.+|.+|   ||+++++
T Consensus       176 NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~---~~~~~~~-~-vi~~~S~SK~~g~~GlRiG~~~~~~  250 (387)
T PRK08960        176 NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA---SVLEVDD-D-AFVLNSFSKYFGMTGWRLGWLVAPP  250 (387)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC---ChhhccC-C-EEEEeecccccCCcccEEEEEEcCH
Confidence            99999998   4577778999999999999987544432111   1222322 2 488999999998665   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-H-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-L-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYL  378 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i  378 (457)
                      ++++.+......+..  +.+.+...++.+.+.. . +...+.++.++++.+.+.+.|++    .++.+. .+.++.++|+
T Consensus       251 ~~~~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~f~~~  324 (387)
T PRK08960        251 AAVPELEKLAQNLYI--SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE----LGFGIAVEPQGAFYLYA  324 (387)
T ss_pred             HHHHHHHHHHhhhcc--CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh----cCCcCCcCCCeeEEEEE
Confidence            998887654332222  2355555555555531 1 11124566778888889999987    455442 3455677788


Q ss_pred             EecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        379 YLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       379 ~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++. ..       ...+++++|+ ++||.+.++..+..  ....+++|+++..  +.++++++++.|.+++
T Consensus       325 ~~~~~~~-------~~~~~~~~ll~~~gi~v~pg~~f~~--~~~~~~iRi~~~~--~~~~l~~al~~l~~~~  385 (387)
T PRK08960        325 DISAFGG-------DAFAFCRHFLETEHVAFTPGLDFGR--HQAGQHVRFAYTQ--SLPRLQEAVERIARGL  385 (387)
T ss_pred             eccccCC-------CHHHHHHHHHHhCCEEEcCchHhCC--CCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence            7764 22       3457888876 57999998765421  1234699999985  6777887777777654

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.95  E-value=1.8e-25  Score=220.55  Aligned_cols=319  Identities=13%  Similarity=0.087  Sum_probs=225.0

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      +..+|||..|.. .++..|.+.+++.+. .... .       |.. ....+|++.++++++.+  .+++++++++++..+
T Consensus        51 ~~~~i~l~~n~~-p~~~~~~v~~a~~~~-~~~~-~-------Yp~-~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~  119 (380)
T PLN03026         51 PEDIVKLDANEN-PYGPPPEVLEALGNM-KFPY-V-------YPD-PESRRLRAALAEDSGLESENILVGCGADELIDLL  119 (380)
T ss_pred             ccceEEccCCCC-CCCCCHHHHHHHHhh-Hhhc-c-------CCC-CCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHH
Confidence            568899988743 233457788877542 1110 0       111 22578999999999854  344444555788888


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +.+++++||.|++..+.|..+....+..|.++..++.+     |++++++.+..          .++++|++++++||+|
T Consensus       120 ~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----------~~~~~v~l~~P~NPTG  189 (380)
T PLN03026        120 MRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVET----------HKPKLLFLTSPNNPDG  189 (380)
T ss_pred             HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhc----------cCCcEEEEeCCCCCCC
Confidence            88899999999999999887777778889888877542     57778777632          2456888888999999


Q ss_pred             CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447        232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR  308 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~  308 (457)
                      .+.|.+++.++++.. +++|+||+|......  +. ....  +...+..|+++||||.+|.+|   ||+++++++++.+.
T Consensus       190 ~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~--~~-~~~~--~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~  263 (380)
T PLN03026        190 SIISDDDLLKILELP-ILVVLDEAYIEFSTQ--ES-RMKW--VKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW  263 (380)
T ss_pred             CCCCHHHHHHHHhcC-CEEEEECcchhhcCC--cc-hHHH--HHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHH
Confidence            999999999999865 999999998643221  11 1111  111123588999999998777   99999999998886


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .....+    +.+.++..++.++|+..+..++.++.++++.+++.+.|++   +.++.+ .++.++++++.++...    
T Consensus       264 ~~~~~~----~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~-~p~~~~f~~~~~~~~~----  331 (380)
T PLN03026        264 RAKQPY----NVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKE---VPFLEP-YPSDANFILCRVTSGR----  331 (380)
T ss_pred             HhcCCC----CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeE-CCCCCeEEEEECCCCC----
Confidence            554332    3455666666666642221234667788888899999988   333444 3567888888876432    


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                         ...++++.|.++||.+++...     +..++++||++.   +++++++++++|+++
T Consensus       332 ---~~~~~~~~l~~~gI~v~~~~~-----~~~~~~lRis~~---~~~~~~~l~~al~~~  379 (380)
T PLN03026        332 ---DAKKLKEDLAKMGVMVRHYNS-----KELKGYIRVSVG---KPEHTDALMEALKQL  379 (380)
T ss_pred             ---CHHHHHHHHHHCCeEEEECCC-----CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence               345789999999999986532     223579999986   788999999999764

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.95  E-value=2.7e-25  Score=217.86  Aligned_cols=319  Identities=13%  Similarity=0.124  Sum_probs=226.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      ++.+|||+.+.. .++.+|.+.+++.+.+...-..       |... ...+|++.+|++++.+  ++++++++++++..+
T Consensus        23 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~~-------y~~~-~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~   93 (353)
T PRK05387         23 LAKLIKLNTNEN-PYPPSPKVLEAIRAALGDDLRL-------YPDP-NADALRQAIAAYYGLDPEQVFVGNGSDEVLAHA   93 (353)
T ss_pred             ccceeeccCCCC-CCCCCHHHHHHHHHHhhhhhhc-------CCCC-cHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence            457899988754 3444688999998877641111       1111 2368999999998754  456666677899999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +.+++++||.|+++.++|..+.......|.++..++..     |++++++               ..+++++.+++||+|
T Consensus        94 ~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---------------~~~~v~~~~P~NPtG  158 (353)
T PRK05387         94 FLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR---------------PNGGIIFPNPNAPTG  158 (353)
T ss_pred             HHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh---------------cCCEEEEeCCCCCCC
Confidence            99999999999999999988877788889888777643     4555431               124677888899999


Q ss_pred             CCCChHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        232 DICPLKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      .+.|.+++.++++++ ++++|+||+|..  ++.  .........  .+.+++++||||.+|.+|   ||+++++++++.+
T Consensus       159 ~~~~~~~~~~l~~~~~~~~livDe~y~~--~~~--~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l  232 (353)
T PRK05387        159 IALPLAEIERILAANPDSVVVIDEAYVD--FGG--ESAIPLIDR--YPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEAL  232 (353)
T ss_pred             CCCCHHHHHHHHHhCCCcEEEEeCcccc--cCC--cchHHHHhh--CCCEEEEEehhHhhcchhhhceeeecCHHHHHHH
Confidence            999999999999876 999999999863  221  111111111  123699999999998766   9999999998888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      +.....+ .+.+.+.+..+++.++++..+..++.+++++++.+++.+.|++    .|+.+. ++.++++++.++. .   
T Consensus       233 ~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~-~---  302 (353)
T PRK05387        233 NRVKNSF-NSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEA----LGFEVL-PSKANFVFARHPS-H---  302 (353)
T ss_pred             HHhhccC-CCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeEC-CCcCcEEEEECCC-C---
Confidence            6543221 1223466666666666642222234677888889999999988    466654 4567777777653 2   


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          ...++++.|.++||.++....     +...+++|++++   +++++++++++|++++.
T Consensus       303 ----~~~~~~~~l~~~gi~v~~~~~-----~~~~~~iRis~~---~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        303 ----DAAELAAKLRERGIIVRHFNK-----PRIDQFLRITIG---TDEEMEALVDALKEILA  352 (353)
T ss_pred             ----CHHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence                345788999999999975432     223579999986   78999999999988753

>PRK08175 aminotransferase; Validated

Probab=99.95  E-value=3.6e-25  Score=219.89  Aligned_cols=345  Identities=14%  Similarity=0.106  Sum_probs=230.7

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~  153 (457)
                      |++++||..+++... ..+.+.+++.+.+.....  ..+....|..++...+++.+.+..|.    + .+++++++++++
T Consensus        28 ~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l  104 (395)
T PRK08175         28 GEDIIDFSMGNPDGP-TPPHIVEKLCEVAQRPDT--HGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL  104 (395)
T ss_pred             CCCeEEcCCCCCCCC-CCHHHHHHHHHHHhCCCc--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence            567899987765433 346677777776643111  11222234555555555555544342    3 344444555788


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ..++.+++++||.|+++.++|......+...|.++..++.+    +++++++.+++..        ++++++++.+++||
T Consensus       105 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~--------~~~~~v~i~~p~NP  176 (395)
T PRK08175        105 AHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESY--------PKPKMMILGFPSNP  176 (395)
T ss_pred             HHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhcc--------CCceEEEEeCCCCC
Confidence            88888899999999999999988777778889888777543    4778888776532        34567778888999


Q ss_pred             CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEecHH
Q psy15447        230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      +|.+.+.   ++|.++|++||+++|+||+|+...++.  ........+.. .+..++++||||.+|.+|   ||++++++
T Consensus       177 tG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~  254 (395)
T PRK08175        177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDG--WKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPE  254 (395)
T ss_pred             CCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCC--CCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHH
Confidence            9999996   799999999999999999997554432  11111111211 133478899999998665   99999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +++.+........++.  +.....++.+.+...+. ...+++.++++.+++.+.|++    .++.+..+.+++++|+.++
T Consensus       255 l~~~~~~~~~~~~~~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p~~g~~i~i~l~  328 (395)
T PRK08175        255 LVSALARIKSYHDYGT--FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMPKASMYVWAKIP  328 (395)
T ss_pred             HHHHHHHHHhhcccCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCEEEEEEEECC
Confidence            9998765432222322  33344445555532111 134567788888999999988    4666654557889999887


Q ss_pred             CCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        382 KSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .....    ....+++++++ ++||.+.++..+.   ....+++||++.  .+++.++++++.|.+++++.
T Consensus       329 ~~~~~----~~~~~~~~~l~~~~gv~v~p~~~f~---~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~  390 (395)
T PRK08175        329 EPYAA----MGSLEFAKKLLNEAKVCVSPGIGFG---DYGDTHVRFALI--ENRDRIRQAIRGIKAMFRAD  390 (395)
T ss_pred             cccCC----CCHHHHHHHHHHhCCEEEeCchhhC---cCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhc
Confidence            54200    02457887776 5799998875421   123468999986  57899999999999888754

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.95  E-value=4.1e-25  Score=221.64  Aligned_cols=350  Identities=14%  Similarity=0.107  Sum_probs=246.3

Q ss_pred             eeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         80 IPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        80 ~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      ...++|+.+.. ..+.+...+.++..+.++.+... ...+....|..++...+.+.+....|    .++++++++..+|+
T Consensus        89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al  168 (459)
T COG1167          89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL  168 (459)
T ss_pred             CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence            67788887642 12334567777877777765433 11222223445555555555553334    23345555555899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ..+.+.++++||.|+++.++|......++..|.++..++.+    |+++|++.++...         .+.++++.+.+||
T Consensus       169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~---------~k~~y~~P~~qNP  239 (459)
T COG1167         169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWK---------PKAVYVTPTFQNP  239 (459)
T ss_pred             HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcC---------CcEEEECCCCCCC
Confidence            99999999999999999999999999999999999988754    7999999998632         3456667778899


Q ss_pred             CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHH
Q psy15447        230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYII  304 (457)
Q Consensus       230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~  304 (457)
                      +|..+++   ++|.++|++||+++|.||.++...+..  .........+..+..|+++||||.+.  ...||+++++.++
T Consensus       240 tG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~--~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~  317 (459)
T COG1167         240 TGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDG--PPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELI  317 (459)
T ss_pred             CCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCC--CCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHH
Confidence            9999996   499999999999999999998766543  22212233333445699999999995  4669999999999


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHH---HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALH---LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~---~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +.+.........++  +.+...+...-+.   +.+....+++.++++.+.+.+.|++... ..+.+..+.++.++|+.++
T Consensus       318 ~~~~~~k~~~~~~~--s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l~  394 (459)
T COG1167         318 EKLLRLKQAADLGP--SSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLELP  394 (459)
T ss_pred             HHHHHHHHHhcCCC--ChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEcC
Confidence            88865443333332  4443333322222   1112245677888888899898887321 2466666677899999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ...       +..++.+.+.++|+.+.+ +..+... ....+.+|++++. .+++++++.+..|.+++.+..
T Consensus       395 ~~~-------~~~~l~~~a~~~gv~i~~~g~~f~~~-~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~  457 (459)
T COG1167         395 EGI-------DARELLAAALEKGVVVTPLGSAFSAD-GDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA  457 (459)
T ss_pred             CCC-------CHHHHHHHHHHCCCEEEcCCccccCC-CCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence            876       667899999999999988 5443221 1145699999976 579999999999998887654

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.95  E-value=3.8e-26  Score=227.59  Aligned_cols=326  Identities=15%  Similarity=0.103  Sum_probs=213.7

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC--CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC--GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      .+++++.+++ ++. +|.+.+++.+++ ..-..++  .+....|..+...++++++++++|.+  .++++++|+.+...+
T Consensus        21 ~~~~l~~g~~-~~~-~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~   97 (398)
T cd00613          21 SMSFLGSGTY-KHN-PPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAA   97 (398)
T ss_pred             Cccccccccc-CCc-CcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHH
Confidence            3455554443 554 677766666555 2111111  11114567788999999999999976  666777666554444


Q ss_pred             -HHhhcCC--CCEEEEeCcccHHHHHHHHhcC----CeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        157 -IAAYVKR--NDAVFVDENINFAIQTGLIASR----CKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       157 -i~a~~~~--gd~v~~~~~~h~~~~~~~~~~g----~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                       +.+...+  ||.|++..++|+++...+...+    .+++.++.+     |++++++.+.           +++++|+++
T Consensus        98 ~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----------~~t~~viv~  166 (398)
T cd00613          98 GLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-----------EEVAALMVQ  166 (398)
T ss_pred             HHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-----------CCeEEEEEE
Confidence             4444555  9999999999999988888777    777777654     5677777663           346788888


Q ss_pred             cCCCCCCCCCCh-HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc------CcccEE
Q psy15447        225 GVYMNSADICPL-KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG------SVGGFC  297 (457)
Q Consensus       225 ~v~~~~G~i~~l-~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg------~~gG~v  297 (457)
                      +++ ++|.+.++ ++|+++|++||+++|+|++|+.+. +.   .....     .++|++++|++|+++      ..+|++
T Consensus       167 ~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~---~~~~~-----~~~d~~~~s~~K~~~p~g~Ggp~~g~l  236 (398)
T cd00613         167 YPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GL---KPPGE-----YGADIVVGNLQKTGVPHGGGGPGAGFF  236 (398)
T ss_pred             CCC-CCceecchHHHHHHHHHhcCCEEEEEecccccc-CC---CChHH-----cCCCEEEeeccccCCCCCCCCCceeEE
Confidence            875 78999885 999999999999999999986543 11   11111     245899999999982      235788


Q ss_pred             EecHHHHHHHHhhC---------------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHH
Q psy15447        298 VGSSYIIEHHRLSG---------------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREK  348 (457)
Q Consensus       298 ~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~  348 (457)
                      +.++++++.+....                           .+..+..+.++..++++.++++.+...  ++.+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~  316 (398)
T cd00613         237 AVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLN  316 (398)
T ss_pred             EEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            88888777542110                           000011122455555555555554332  3467889999


Q ss_pred             HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++++++.|++   +.+.........+.+++.+....     .....++++.|+++||++....      +...+.+|++|
T Consensus       317 ~~~l~~~L~~---~~~~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~L~~~gi~~~~~~------~~~~~~lRis~  382 (398)
T cd00613         317 ANYLAKRLKE---VGGVLPFNGPFFHEFVLRLPPLY-----GIRAEDLAKALIDGGFHAPTMY------LPVDGTLMIEP  382 (398)
T ss_pred             HHHHHHHHHh---cCCcccCCCCeeEEEEEEcCCcc-----hHHHHHHHHhhhhcCccccccc------cCCCCeEEEEc
Confidence            9999999988   22222111112233445544310     0146689999999999865432      12357899999


Q ss_pred             cCCCCHHHHHHHHHHH
Q psy15447        429 NISHTEQDMNSLIETL  444 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l  444 (457)
                      +..+|++|||+++++|
T Consensus       383 ~~~~t~edid~~~~~L  398 (398)
T cd00613         383 TETETKEELDALLEAL  398 (398)
T ss_pred             CCCCCHHHHHHHHHhC
Confidence            9999999999999864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.95  E-value=3.2e-25  Score=220.43  Aligned_cols=337  Identities=13%  Similarity=0.090  Sum_probs=227.7

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----C-cEEEecccHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----E-ETALYSFGFS  151 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~-~~i~~~sG~~  151 (457)
                      .|++++||..+.+ .+...+.+.+++.+.+... .   .+....|..++...+++.+.+..|.     + .+++++++++
T Consensus        27 ~~~~~i~l~~~~p-~~~~~~~~~~~~~~~~~~~-~---~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~  101 (396)
T PRK09147         27 ADLPPISLSIGEP-KHPTPAFIKDALAANLDGL-A---SYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSRE  101 (396)
T ss_pred             cCCCeEecCCCCC-CCCCCHHHHHHHHHHhhhh-c---CCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHH
Confidence            4789999988764 3444677888887766432 1   1222345556666666666555463     2 3444556668


Q ss_pred             HHHHHHHhhcCC---CCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        152 TSASAIAAYVKR---NDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       152 a~~~ai~a~~~~---gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      ++..++.+++++   ||.|+++.++|..+...++..|.++..++.       .|++++++.+.+           +++++
T Consensus       102 al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-----------~~k~i  170 (396)
T PRK09147        102 ALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA-----------RTQLL  170 (396)
T ss_pred             HHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh-----------ccEEE
Confidence            999999999999   899999999998888888888988887764       256777665532           34677


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc--ccc---ccCCCCCCccEEEecCcccccCc
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG--VTE---YFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~--~~~---~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      ++.+++||+|.+.+   +++|.++|++|+++||+||+|+...+......  ...   ..+....+..|+++||||.+|.+
T Consensus       171 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~  250 (396)
T PRK09147        171 FVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP  250 (396)
T ss_pred             EEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCc
Confidence            77789999999987   67888899999999999999986554321011  010   11111012249999999998776


Q ss_pred             c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447        294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH  370 (457)
Q Consensus       294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~  370 (457)
                      |   ||+++++++++.+......  .+.+.+++..+++.+.+...+...+.++.++++.+.+.+.|++    . +.+..+
T Consensus       251 GlRiG~~~~~~~l~~~~~~~~~~--~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~-~~~~~p  323 (396)
T PRK09147        251 GLRSGFVAGDAALLKKFLLYRTY--HGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAP----V-LDVQLP  323 (396)
T ss_pred             cceeeeecCCHHHHHHHHHHhhh--cccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH----h-cCCCCC
Confidence            6   9999999998887643321  2223456665665555532111123566777888888888876    2 334345


Q ss_pred             CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccc---cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++.++|+.++.         ...++++.|+ ++||.+.++..+...   .....+++||+++.  +++++++++++|++
T Consensus       324 ~~g~f~~~~~~~---------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~  392 (396)
T PRK09147        324 DAGFYLWAKVPG---------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVD  392 (396)
T ss_pred             CeeEEEEEECCC---------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence            678888888762         2346777776 579999987654220   11235789999874  68899999999987


Q ss_pred             HH
Q psy15447        447 SH  448 (457)
Q Consensus       447 ~~  448 (457)
                      ++
T Consensus       393 ~~  394 (396)
T PRK09147        393 FC  394 (396)
T ss_pred             Hh
Confidence            65

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.95  E-value=6.6e-25  Score=218.55  Aligned_cols=347  Identities=15%  Similarity=0.101  Sum_probs=227.8

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a  152 (457)
                      .|.+++||..+++... ..+.+.+++.+.+....  ..++....|..++...+++.+.+..|.    + ++++++++.++
T Consensus        31 ~~~~~~~l~~g~p~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a  107 (403)
T PRK08636         31 AGEDIIDFSMGNPDGP-TPQHIIDKLCESAQKPK--THGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG  107 (403)
T ss_pred             cCCCEEEcCCcCCCCC-CCHHHHHHHHHHhcCCc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence            3567899987655332 23456666665553311  112222345556666666666555452    3 34555555689


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHH----HHHHHHhhchhcccCCCCccEEE
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQH----LEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~----le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +..++.+++++||.|+++.++|..+...+...|.++..++.       .|+++    +++.+++..        .+++++
T Consensus       108 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~--------~~~~~i  179 (403)
T PRK08636        108 YVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS--------PKPKYV  179 (403)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc--------CCceEE
Confidence            99999999999999999999999998889999999877653       24554    344444321        356788


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---  294 (457)
                      ++.+++||+|.+.+   +++|.++|++|++++|+||+|+...+..  ........++. .+..++++||||.+|.+|   
T Consensus       180 ~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi  257 (403)
T PRK08636        180 VVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDG--YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRV  257 (403)
T ss_pred             EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCC--CCCCChhcCCCccccEEEEEecccccCCcccee
Confidence            88888999999998   5788899999999999999998654432  11111112211 123467899999997655   


Q ss_pred             cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447        295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT  373 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~  373 (457)
                      ||+++++++++.+........++.  +.+...++..+++...+ ..++++.++++.+.+.+.|++    .++.+..+..+
T Consensus       258 G~iv~~~~li~~~~~~~~~~~~~~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~p~~g  331 (403)
T PRK08636        258 GFVVGNKKLVGALKKIKSWLDYGM--FTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFAN----AGWELQKPRAS  331 (403)
T ss_pred             eeeeCCHHHHHHHHHHHHHhcccC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCcc
Confidence            999999999888765432212222  23333333333321111 123566777888888888888    46666555678


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++|+.++.....    ....++++.++ ++||.+.++..+.   ....+++||++.  .+++++++.++.|+++++..+
T Consensus       332 ~~~~~~l~~~~~~----~~~~~l~~~ll~~~gV~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~~  402 (403)
T PRK08636        332 MFVWAKIPEPARH----LGSLEFSKQLLTEAKVAVSPGIGFG---EYGDEYVRIALI--ENENRIRQAARNIKKFLKELE  402 (403)
T ss_pred             eEEEEECCCccCC----CCHHHHHHHHHHhCCEEEecchhhC---cCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhhc
Confidence            8889988643200    02356777755 5799999876432   123579999996  589999999999999887643

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.95  E-value=5e-25  Score=215.40  Aligned_cols=317  Identities=14%  Similarity=0.167  Sum_probs=224.3

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEeccc-HHHHHHHHHh
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFG-FSTSASAIAA  159 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-~~a~~~ai~a  159 (457)
                      .++|..|.. .+...+.+.+++.+.+......      .|. .+...+|++.+|++++.+ +.+++++| ++++..++.+
T Consensus        24 ~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~~~------~y~-~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~   95 (351)
T PRK14807         24 KYKMDANET-PFELPEEVIKNIQEIVKSSQVN------IYP-DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLA   95 (351)
T ss_pred             eeEccCCCC-CCCCCHHHHHHHHHHhhcCccc------CCC-CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHH
Confidence            467777654 4555688999988877532111      111 122478999999999864 34445545 5778888889


Q ss_pred             hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      ++++||.|++..++|..+...++..|.++..++.     .|++++++.++.          .+++++++++++||+|.+.
T Consensus        96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~----------~~~k~v~l~~p~NPtG~~~  165 (351)
T PRK14807         96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK----------YQPKLVFLCNPNNPTGSVI  165 (351)
T ss_pred             hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc----------cCCCEEEEeCCCCCCCCCC
Confidence            9999999999999988877777888988887753     267888877753          2456777778999999999


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhC
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSG  311 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~  311 (457)
                      +.+++.++|++++.++|+||+|... .+.   .......  ..+..|+++||||.+|.+|   ||+++++++++.++...
T Consensus       166 ~~~~l~~l~~~~~~~~ivDe~y~~~-~~~---~~~~~~~--~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~  239 (351)
T PRK14807        166 EREDIIKIIEKSRGIVVVDEAYFEF-YGN---TIVDVIN--EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVK  239 (351)
T ss_pred             CHHHHHHHHHhCCCEEEEeCcchhh-ccc---chHHHhh--hCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHcc
Confidence            9999999999999999999998632 232   1111111  1123599999999998766   99999999999887543


Q ss_pred             CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHH
Q psy15447        312 SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKK  391 (457)
Q Consensus       312 ~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  391 (457)
                      ..  +  +.+++...++.+.++. ....+..+.++++.+++.+.|++   .+|+.+. +++++++++.+.+         
T Consensus       240 ~~--~--~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~---~~g~~~~-~~~~~~~~i~~~~---------  301 (351)
T PRK14807        240 SP--Y--NINSLSQVIALKVLRT-GVLKERVNYILNERERLIKELSK---IPGIKVY-PSKTNFILVKFKD---------  301 (351)
T ss_pred             CC--C--CcCHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-cCCccEEEEEcCC---------
Confidence            22  2  2355555555555542 11233456677788888888876   4677664 5567788877753         


Q ss_pred             HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                       ..++++.|+++||.+++....    +...+++||++.   +.++.++++++|++++
T Consensus       302 -~~~~~~~l~~~gV~v~~~~~~----~~~~~~iRis~~---~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        302 -ADYVYQGLLERGILVRDFSKV----EGLEGALRITVS---SCEANDYLINGLKELL  350 (351)
T ss_pred             -HHHHHHHHHHCCEEEEECCCC----CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence             246888899999999764311    223578999986   6889999999998753

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.95  E-value=3.2e-25  Score=216.87  Aligned_cols=333  Identities=14%  Similarity=0.119  Sum_probs=222.7

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHh
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a  159 (457)
                      |++.+++ .+..+|.+.++..+  ..++.....+....|..+....+++.+....+    .+..+++++|++++..++.+
T Consensus         2 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~   78 (350)
T cd00609           2 DLSIGEP-DFPPPPEVLEALAA--AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRA   78 (350)
T ss_pred             CCCCCCC-CCCCCHHHHHHHHH--HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHH
Confidence            5555555 44556777766655  23332222222223344444444444444333    34567788889999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHH---HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHL---EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~l---e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      +.++||.|+++.+.|.++...++..+.++..++.++....   ++.++...       .+++++|+++++++++|.+.|+
T Consensus        79 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~~~~~~v~i~~~~~~tG~~~~~  151 (350)
T cd00609          79 LLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAK-------TPKTKLLYLNNPNNPTGAVLSE  151 (350)
T ss_pred             hCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhc-------CccceEEEEECCCCCCCcccCH
Confidence            9999999999999999999999999988887776532111   11222111       1456788888999999999985


Q ss_pred             H---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc---ccEEEecH-HHHHHHHh
Q psy15447        237 K---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSS-YIIEHHRL  309 (457)
Q Consensus       237 ~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~-~~~~~~~~  309 (457)
                      +   +|+++|+++|+++|+||+|+.+.++.....  ........+.|++++|++|.++..   .|++++++ ++.+.++.
T Consensus       152 ~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~  229 (350)
T cd00609         152 EELEELAELAKKHGILIISDEAYAELVYDGEPPP--ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK  229 (350)
T ss_pred             HHHHHHHHHHHhCCeEEEEecchhhceeCCcccc--cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH
Confidence            5   555899999999999999987655433221  111222234589999999999743   38998988 78888865


Q ss_pred             hCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        310 SGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       310 ~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .....  +.+.++..+.++...++.. +..+...++++++.+++.+.|++.   .......+..+.++++.+....    
T Consensus       230 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~g~~~~~~~~~~~----  300 (350)
T cd00609         230 LLPYT--TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL---GPLVVVKPSGGFFLWLDLPEGD----  300 (350)
T ss_pred             HHHhc--ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc---CCccccCCCccEEEEEecCCCC----
Confidence            54322  2334666666666666655 233456778889999999999882   2222122445667777766542    


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                         ....+.+.|.++||.+.+...+.   ....+++|++++..  ++|+++++++|+
T Consensus       301 ---~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~iRi~~~~~--~~~i~~~~~al~  349 (350)
T cd00609         301 ---DEEFLERLLLEAGVVVRPGSAFG---EGGEGFVRLSFATP--EEELEEALERLA  349 (350)
T ss_pred             ---hHHHHHHHHHhCCEEEecccccc---cCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence               34456677777799998765432   12467999999886  999999999986

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.95  E-value=2.2e-25  Score=210.35  Aligned_cols=335  Identities=16%  Similarity=0.139  Sum_probs=243.3

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhc-CCCCCCCCCccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKN-GVGSCGPRGFYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~-~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      |+|.+...+    -.|++.+++...+... |..+  +...+|  .....++.++.+|+++|.+  +++|+++|++++..+
T Consensus         4 YlD~~ATTp----~~~~v~~~m~~~~~~~fgNPs--S~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNla   77 (386)
T COG1104           4 YLDNAATTP----VDPEVLEAMLPYLTEVFGNPS--SLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLA   77 (386)
T ss_pred             cccccccCC----CCHHHHHHHHHHHHhhcCCcc--chhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHH
Confidence            556555332    3689999999999875 4322  222334  3566777889999999954  567778889999999


Q ss_pred             HHh--hc----CCCCEEEEeCcccHHHHHHHHhc---CCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        157 IAA--YV----KRNDAVFVDENINFAIQTGLIAS---RCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       157 i~a--~~----~~gd~v~~~~~~h~~~~~~~~~~---g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      |+.  ..    +++.+|++..-.|.++...++..   |.++.+.+.+     |+++|+++|+.           ++.+|.
T Consensus        78 I~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~-----------~T~LVS  146 (386)
T COG1104          78 IKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP-----------DTILVS  146 (386)
T ss_pred             HHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC-----------CceEEE
Confidence            886  22    26789999999999999887766   7888877765     79999999863           578999


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS  301 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~  301 (457)
                      +-.++|.+|.+.|+++|.++|+++|+++++|.+|++|.+.         .++....+|++..|-||..|+.| |++..++
T Consensus       147 im~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkip---------i~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~  217 (386)
T COG1104         147 IMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIP---------IDLEELGVDLLSFSAHKFGGPKGIGALYVRP  217 (386)
T ss_pred             EEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCcee---------ccccccCcceEEeehhhccCCCceEEEEECC
Confidence            9999999999999999999999999999999999987653         22322347999999999998766 7766554


Q ss_pred             HHH-HHHHhhCCcc---eecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CC
Q psy15447        302 YII-EHHRLSGSGY---CFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DT  373 (457)
Q Consensus       302 ~~~-~~~~~~~~~~---~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~  373 (457)
                      .+. +.+... .++   .-+++.|....++.-+++++..+ .+....++..+.++|.+.|.+.  .+.+.+.+..   -.
T Consensus       218 ~~~~~p~i~G-GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~--~p~~~~~g~~~~rlP  294 (386)
T COG1104         218 GVRLEPLIHG-GGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEI--IPDVYLNGDDEPRLP  294 (386)
T ss_pred             CCccCceecc-CcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcEEEcCCcccCCC
Confidence            332 212111 111   12334455555555555554433 3556788999999999999872  2667766543   24


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHH
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~  439 (457)
                      +++.+.++.-        ....+...|..+||+++.+..|....              ......+||+++..+|++|+|+
T Consensus       295 ~~~~~~f~gv--------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~  366 (386)
T COG1104         295 NILNFSFPGV--------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDA  366 (386)
T ss_pred             CeEEEEeCCC--------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHH
Confidence            4566666654        34567777778899999888776511              1125689999999999999999


Q ss_pred             HHHHHHHHHHHhcC
Q psy15447        440 LIETLCKSHDIAVQ  453 (457)
Q Consensus       440 ~~~~l~~~~~~~~~  453 (457)
                      ++++++++++.++.
T Consensus       367 ~~~~l~~~i~~lr~  380 (386)
T COG1104         367 AAEALKEIIKRLRE  380 (386)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999988764

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.95  E-value=3e-25  Score=221.03  Aligned_cols=338  Identities=14%  Similarity=0.086  Sum_probs=228.6

Q ss_pred             CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-------CCcEEEecc
Q psy15447         79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-------LEETALYSF  148 (457)
Q Consensus        79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~s  148 (457)
                      |+.+++|..+.+-   .+...+.+.+++.+.+......  ++....|.    .+|++.++++++       .+.++++++
T Consensus        30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~g~----~~lr~aia~~~~~~~~~~~~~~i~~t~G  103 (401)
T TIGR01264        30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYN--GYAPTVGA----LSAREAIASYYHNPDGPIEADDVVLCSG  103 (401)
T ss_pred             CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCC--CCCCCCCC----HHHHHHHHHHHhhcCCCCCHHHEEECcC
Confidence            4678899887653   3556788999988887652111  11111233    456666666654       345667777


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +++++..++.+++++||.|++..++|..+...+...|.++..++.       .|++.+++.+++           +++++
T Consensus       104 ~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v  172 (401)
T TIGR01264       104 CSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE-----------KTAAL  172 (401)
T ss_pred             hHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc-----------CceEE
Confidence            789999999999999999999999998888888888988877643       257778776643           34677


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---c
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---G  295 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G  295 (457)
                      ++++++||+|.+.+   +++|.++|+++|+++|+||+|....+..  ..........+....|+++||||+++.+|   |
T Consensus       173 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG  250 (401)
T TIGR01264       173 IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG--ATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG  250 (401)
T ss_pred             EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC--cccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence            88888999999987   7789999999999999999987544422  11111122222222488999999987665   9


Q ss_pred             EEEecH------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        296 FCVGSS------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       296 ~v~~~~------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                      |+++++      ++++.++.... ..+  +.+++...++.+.++..  +...+.+++++++.+++.+.|++   .+++.+
T Consensus       251 ~iv~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~---~~~~~~  324 (401)
T TIGR01264       251 WIIIHDRRGILRDIRDGLVKLSQ-RIL--GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAA---VPGLRP  324 (401)
T ss_pred             EEEecCcchhHHHHHHHHHHHhh-ccC--CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHh---CCCCcc
Confidence            998863      34444443221 112  23455555555555321  11134567788888899999988   346665


Q ss_pred             eccCCCCeEEEEecCCc-chHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        368 QGHRDTPLKYLYLQKSD-DEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       368 ~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      ..+.++.++|+.+.... ..   .....++++.|+ ++||++.++..+     ...+++|++++.  +++++++.+++|.
T Consensus       325 ~~p~~g~f~~~~~~~~~~~~---~~~~~~~~~~l~~~~gI~v~pg~~f-----~~~~~iRis~~~--~~~~l~~~l~rl~  394 (401)
T TIGR01264       325 VMPSGAMYMMVGIEMEHFPE---FKNDVEFTERLVAEQSVFCLPGSCF-----EYPGFFRVVLTV--PVVMMEEACSRIQ  394 (401)
T ss_pred             cCCCeeeEEEEEecccccCC---CCCHHHHHHHHHHhCCEEEeCchhc-----CCCCeEEEEEcC--CHHHHHHHHHHHH
Confidence            55667888888875310 00   002346777876 689999887642     235799999974  6899999999999


Q ss_pred             HHHHHh
Q psy15447        446 KSHDIA  451 (457)
Q Consensus       446 ~~~~~~  451 (457)
                      ++++++
T Consensus       395 ~~~~~~  400 (401)
T TIGR01264       395 EFCERH  400 (401)
T ss_pred             HHHhcc
Confidence            887653

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.95  E-value=2.3e-25  Score=220.31  Aligned_cols=320  Identities=13%  Similarity=0.144  Sum_probs=225.5

Q ss_pred             CChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447         95 ENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFV  169 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~  169 (457)
                      .++.+.+++.+.+++++.  +...++...+..+...++++.+++++|.+   .+++++++++++..++.+++++||.|++
T Consensus        12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~   91 (376)
T TIGR01977        12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVIT   91 (376)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEE
Confidence            346899999999887642  11112111123467789999999999964   3566678889999999998899999999


Q ss_pred             eCcccHHHHHH----HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447        170 DENINFAIQTG----LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL  240 (457)
Q Consensus       170 ~~~~h~~~~~~----~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~  240 (457)
                      ....|.++...    ....|.++..++.     .|++++++.+.           ++++++++++++|++|.+.|+++|.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----------~~~~~v~~~~~~n~tG~~~~~~~i~  160 (376)
T TIGR01977        92 TPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-----------TNTKLIVVSHASNVTGTILPIEEIG  160 (376)
T ss_pred             CcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-----------CCCeEEEEECCCCCccccCCHHHHH
Confidence            99888876543    2344777776653     36888888774           2457888889999999999999999


Q ss_pred             HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEE-EecHHHHHHHHhhCC-----
Q psy15447        241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFC-VGSSYIIEHHRLSGS-----  312 (457)
Q Consensus       241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v-~~~~~~~~~~~~~~~-----  312 (457)
                      ++|++||+++|+|++|++|...         +++...++|+++.|++|+++++ | |++ +.++..+..+.....     
T Consensus       161 ~l~~~~~~~livD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~  231 (376)
T TIGR01977       161 ELAQENGIFFILDAAQTAGVIP---------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSA  231 (376)
T ss_pred             HHHHHcCCEEEEEhhhccCccC---------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccc
Confidence            9999999999999999987642         2233346799999999998542 3 444 444432221111100     


Q ss_pred             ----------cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCCeE
Q psy15447        313 ----------GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTPLK  376 (457)
Q Consensus       313 ----------~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~~~  376 (457)
                                .+. .++.+....++..++++.+.+.  +.++++.+++.+++.+.|++   .+++.+..+.    ..+++
T Consensus       232 ~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~---~~~~~~~~~~~~~~~~~~v  307 (376)
T TIGR01977       232 LIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLRE---INKVKIYGPADPANRVGVV  307 (376)
T ss_pred             cccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCCCccccCCeE
Confidence                      011 1234555566666788877654  45678889999999999987   5777775431    35677


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccc-----cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQE-----AKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~-----~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .+.+...        ...++.+.|.++ ||.++.+.++...     .....+.+|++++..+|++|+++++++|++
T Consensus       308 ~~~~~~~--------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       308 SFTVEGI--------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EEEECCC--------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence            7776532        345788999988 9999876543210     011346899999999999999999999975

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.95  E-value=1e-24  Score=221.49  Aligned_cols=342  Identities=13%  Similarity=0.115  Sum_probs=220.7

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEEeC
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFVDE  171 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~  171 (457)
                      ..+.+++.+.++..+.....+....|..++.+.+++.+.+..|    .+++++++++++++..++.+++ ++||.|++..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~  170 (481)
T PTZ00377         91 ADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPI  170 (481)
T ss_pred             HHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECC
Confidence            3567777776665432222233334555555555555554333    3355666677789999999998 7999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILS  241 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~  241 (457)
                      ++|..+...++..|.+++.++.       .|++++++.+.....+     ..+++++++.+++||||.+.+   +++|.+
T Consensus       171 P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~  245 (481)
T PTZ00377        171 PQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRN-----GITPRALVVINPGNPTGQVLTRDVMEEIIK  245 (481)
T ss_pred             CCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhc-----CCCeeEEEEECCCCCCCcCCCHHHHHHHHH
Confidence            9999999999999988877653       2678998888643210     124566666688999999999   789999


Q ss_pred             HHHHcCcEEEEEcCcccccccC-CC-Cccccc-cCCCCC----CccEEEecCcccc-cCc---ccEEEe---cHHHHHHH
Q psy15447        242 LRSKYQARIFVDESVSFGTLGS-TG-HGVTEY-FGVSTE----EVDMIIGSLEHAL-GSV---GGFCVG---SSYIIEHH  307 (457)
Q Consensus       242 l~~~~g~~li~DEa~~~g~~g~-~g-~~~~~~-~~~~~~----~~Di~~~s~sK~l-g~~---gG~v~~---~~~~~~~~  307 (457)
                      +|++||+++|+||+|+...+.. .. ..+... .++.++    ...|+++||||++ +.+   .||+++   ++++++.+
T Consensus       246 ~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l  325 (481)
T PTZ00377        246 FCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQI  325 (481)
T ss_pred             HHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHH
Confidence            9999999999999998655521 11 111110 112221    1237889999984 544   499885   88888888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHH-----------HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHL-----------LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~-----------~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      ..... ...  +.++++..++.++++.           .++....++.++++.+.+.+.|++   ++|+.+..+.++.++
T Consensus       326 ~~~~~-~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~---~~g~~~~~p~gg~fl  399 (481)
T PTZ00377        326 YKLAS-INL--CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK---IEGVSCQPVEGAMYA  399 (481)
T ss_pred             HHHhh-eec--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEeecCCeeEEE
Confidence            65432 212  2355565666555531           111122334567888889999988   468887755556777


Q ss_pred             EEEecCCcch-HHHH----HHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDE-VASK----KLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       377 ~i~~~~~~~~-~~~~----~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      |+.+..+... ....    .....++ ..|.++||.+.++..+..  ..+.+++|+++.  .++++++++++.|+++++.
T Consensus       400 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~--~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~  475 (481)
T PTZ00377        400 FPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQ--KPGTYHFRITIL--PPEEQIEEMVKKIKEFHES  475 (481)
T ss_pred             EeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
Confidence            7655422100 0000    0012344 445567999998875421  123468999997  6789999999999999887


Q ss_pred             hcC
Q psy15447        451 AVQ  453 (457)
Q Consensus       451 ~~~  453 (457)
                      ..+
T Consensus       476 ~~~  478 (481)
T PTZ00377        476 FMK  478 (481)
T ss_pred             HHH
Confidence            644

>PRK07550 hypothetical protein; Provisional

Probab=99.95  E-value=7.8e-25  Score=217.03  Aligned_cols=336  Identities=13%  Similarity=0.111  Sum_probs=227.9

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~  154 (457)
                      |+..+||.+++. .+...+.+.+++.+.+... . ...+....|..++...+++.+.+..|.    +.+++++++++++.
T Consensus        28 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~  104 (386)
T PRK07550         28 DGPLIDLSQAVP-GYPPPPELLRALAEAAADP-A-AHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW  104 (386)
T ss_pred             CCCeEEeCCCCC-CCCCCHHHHHHHHHHHhCc-C-CcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence            566899988764 3444677888888776431 1 111222345666666677776665552    34455555568999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|+++.+.|......++..|.++..++..       |++++++.++.           +++++++.+++
T Consensus       105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~P~  173 (386)
T PRK07550        105 AAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP-----------RTRAIALVTPN  173 (386)
T ss_pred             HHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc-----------cCcEEEEeCCC
Confidence            9999999999999999999988887888889888777642       57778887753           23455566788


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCC-CCCCccEEEecCcccccCcc---cEEEec
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGV-STEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~-~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|+....+. +.. ...+.. ......+++.||||.+|.+|   ||++++
T Consensus       174 NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~-~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~  251 (386)
T PRK07550        174 NPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGG-GAP-HDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS  251 (386)
T ss_pred             CCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCC-CCC-cchhhCCCccccEEEEecchhhccCcccceEeeecC
Confidence            99999988   6799999999999999999987543321 111 011111 11222578999999997554   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +++++.+.........  +.+.+...++...++.+++. .+.++.++++.+.+.+.|++   ..++.+. +.++.++|+.
T Consensus       252 ~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~g~~~~~~~  325 (386)
T PRK07550        252 PARIAEIEKFMDTVAI--CAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR---LPGWELL-ASGAYFAYVR  325 (386)
T ss_pred             HHHHHHHHHHHhhccc--CCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh---CCCceeC-CCceEEEEec
Confidence            9888877654332222  23555555555555433222 24567788888999999987   3455543 4456777887


Q ss_pred             ecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        380 LQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       380 ~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +.. ..       ...++++.|. ++||.+.++..+.   ....+++||+++. .++++++++++.|.++
T Consensus       326 ~~~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~~-~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        326 HPFPDR-------PSREVARRLAKEAGILCLPGTMFG---PGQEGYLRLAFAN-ADVAGIGELVERLRAF  384 (386)
T ss_pred             CCCCCC-------CHHHHHHHHHHhcCEEEeCchhhC---CCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence            764 33       4567888875 5799999876532   1235789999964 5799999999998764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.95  E-value=9.1e-25  Score=218.47  Aligned_cols=346  Identities=12%  Similarity=0.068  Sum_probs=228.9

Q ss_pred             CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHH
Q psy15447         79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFS  151 (457)
Q Consensus        79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~  151 (457)
                      |+++|++..+++-   .+...+++.+++.+.++.-...  ++....|..+..+.+++.+.+..|    .+++++++++++
T Consensus        51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~  128 (430)
T PLN00145         51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYN--SYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQ  128 (430)
T ss_pred             CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCC--CCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHH
Confidence            7899999887553   3445678999999888752111  111122344444444444433222    245677777889


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      |+..++.++.++||.|++..++|..+.......|.++..++.       .|++++++.+..           +++++++.
T Consensus       129 al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~i~  197 (430)
T PLN00145        129 AIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE-----------NTVAMVII  197 (430)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc-----------CceEEEEe
Confidence            999999999999999999999998877778888888877653       267888776643           45677777


Q ss_pred             cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +++||+|.+.+   +++|.++|++||+++|+||+|....++..  .+.....+......|+++||||.++.+|   ||++
T Consensus       198 ~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv  275 (430)
T PLN00145        198 NPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIA  275 (430)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--CccchhhhcccCcEEEEeccccccCCCCeeEEEEE
Confidence            78999999998   78889999999999999999976555321  1111111111223599999999987766   9988


Q ss_pred             e--cHHHHH------HHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        299 G--SSYIIE------HHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       299 ~--~~~~~~------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      +  ++.+++      .+....   ..+...+.+..+++...|+.-  ....+.++.++++.+.+.+.|++   ++++.+.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~g~~~~  349 (430)
T PLN00145        276 TCDPNGILKETKVVDSIRNYL---NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE---IKCITCP  349 (430)
T ss_pred             EecchhhhhhhHHHHHHHHHh---cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCC
Confidence            6  343332      232221   112223555556665555421  11134667888888899999987   4576543


Q ss_pred             -ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        369 -GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       369 -~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                       .+.+++++++.++...-..  .....+++.+|+ ++||.+.++..+     ...+++||++.  .+++++++.++.|.+
T Consensus       350 ~~P~ga~y~~v~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pG~~f-----g~~~~lRis~~--~~~~~l~~al~rl~~  420 (430)
T PLN00145        350 HKPEGSMFVMVKLDLSCLSG--IKDDMDFCCKLAKEESVVVLPGSAL-----GMKNWLRITFA--IDPPSLEDGLERLKS  420 (430)
T ss_pred             cCCCeeeEEEeccChhhcCC--CCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEeC--CCHHHHHHHHHHHHH
Confidence             3566778888775310000  002345666555 569999987653     33689999997  378999999999999


Q ss_pred             HHHHhcCC
Q psy15447        447 SHDIAVQP  454 (457)
Q Consensus       447 ~~~~~~~~  454 (457)
                      ++......
T Consensus       421 ~~~~~~~~  428 (430)
T PLN00145        421 FCLRHAKL  428 (430)
T ss_pred             HHHHhccc
Confidence            98776544

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.95  E-value=3.3e-25  Score=217.92  Aligned_cols=325  Identities=12%  Similarity=0.064  Sum_probs=216.9

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEec-ccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYS-FGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~-sG~~a  152 (457)
                      ++..++||..+++. ....+.+.+++.+.....     .+....|..++...+++.+.+..|.    ++.++++ +++++
T Consensus        25 ~~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~   98 (364)
T PRK07865         25 HPDGIVDLSVGTPV-DPVPPVIQEALAAAADAP-----GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL   98 (364)
T ss_pred             cCCCEEEcCCCCCC-CCCCHHHHHHHHHHHhhC-----CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence            34568899887653 233577888877654321     1222345556666677766665442    2334455 55577


Q ss_pred             HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        153 SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +..+..++ +++||.|+++.++|..+...+...|.++..++  ++++++.              .+++++++++++||+|
T Consensus        99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--~~~~l~~--------------~~~~~v~~~~p~NPtG  162 (364)
T PRK07865         99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--SLTELGP--------------QRPALIWLNSPSNPTG  162 (364)
T ss_pred             HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--ChhhCCc--------------ccceEEEEcCCCCCCC
Confidence            77776777 79999999999999999888898999887764  3333221              2446777778999999


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc--cCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY--FGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~--~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      .+.+   +++|.++|++||+++|+||+|+...+..........  .+.. .+..|+++||||.+|.+|   ||+++++++
T Consensus       163 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~  241 (364)
T PRK07865        163 RVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD-HTGLLAVHSLSKQSNLAGYRAGFVAGDPAL  241 (364)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc-cceEEEEeechhccCCCceeeEEEecCHHH
Confidence            9988   578889999999999999999754332111111110  0111 123599999999997655   999999999


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      ++.++.......+  +.+++..+++.+.++..+..++.++.++++.+.+.+.|++    .|+.+..+..+.++|+.+.. 
T Consensus       242 ~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~-  314 (364)
T PRK07865        242 VAELLEVRKHAGM--MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEA----AGFRVDHSEAGLYLWATRGE-  314 (364)
T ss_pred             HHHHHHHHHhcCC--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCccEEEEEeCCC-
Confidence            8887654322222  2355555655555543222234567778888899999988    47666544445566666532 


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                              ...++.+.|.++||.+.++.++.   ...++++||+++.  ++++++++++.|+
T Consensus       315 --------~~~~~~~~l~~~gv~v~pg~~f~---~~~~~~iRi~~~~--~~~~~~~~~~~l~  363 (364)
T PRK07865        315 --------DCWDTVAWLAERGILVAPGDFYG---PAGAQHVRVALTA--TDERIAAAVERLA  363 (364)
T ss_pred             --------CHHHHHHHHHHCCEEEeCccccC---cCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence                    23467788899999998876432   1235799999975  6899999998874

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.95  E-value=4.3e-25  Score=216.36  Aligned_cols=324  Identities=12%  Similarity=0.067  Sum_probs=217.6

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a  152 (457)
                      ++.+++|+.++++. ....+.+.+++.+.....     .+....|..+++.++++.+.+..|.     ++++++++++++
T Consensus        19 ~~~~~i~l~~~~p~-~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~   92 (357)
T TIGR03539        19 HPDGIVDLSVGTPV-DPVPPLIRAALAAAADAP-----GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKEL   92 (357)
T ss_pred             CCCCeEEccCCCCC-CCCCHHHHHHHHHHHhhC-----CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHH
Confidence            35678999987642 333577888877655432     1222345666677777777665453     344555555688


Q ss_pred             HHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        153 SASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +..++.++ +++||.|+++.++|..+...+...|.++..++  +++.++    .          .++++|++++++||+|
T Consensus        93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~l~----~----------~~~~~v~~~~p~NPtG  156 (357)
T TIGR03539        93 VAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTELD----P----------VGPDLIWLNSPGNPTG  156 (357)
T ss_pred             HHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--ChhhcC----c----------cCccEEEEeCCCCCcC
Confidence            88777777 79999999999999998888888898887763  433322    1          3457888889999999


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc--cCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY--FGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~--~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      .+.+   +++|.++|++||+++|+||+|....++.........  .+...+. .|+++||||.+|.+|   ||+++++++
T Consensus       157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~~~~G~R~G~~i~~~~~  235 (357)
T TIGR03539       157 RVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTG-LLAVHSLSKRSNLAGYRAGFVAGDPAL  235 (357)
T ss_pred             ccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCcccc-EEEEeccccccCCCceeEEEEecCHHH
Confidence            9987   668899999999999999998643332211111110  1111122 488999999986554   999999998


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      ++.++......  +.+.+.+...++.++++........++.++++.+++.+.|++    .|+.+..+..+.++++.++. 
T Consensus       236 ~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~p~~~~~~~~~~~~-  308 (357)
T TIGR03539       236 VAELLTVRKHA--GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFRIDHSEAGLYLWATRGE-  308 (357)
T ss_pred             HHHHHHHHhhc--ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCCcCCCccEEEEEECCC-
Confidence            88876443221  123355555666666532222234567778888899999988    46665544445566666543 


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                              ...++.+.|.++||.+.++.++.   ...++++||+++.  ++++++++++.|
T Consensus       309 --------~~~~~~~~l~~~gV~v~pg~~f~---~~~~~~iRis~~~--~~~~i~~~~~~l  356 (357)
T TIGR03539       309 --------DAWDTVDRLAELGILVAPGDFYG---PAGSQHVRVALTA--TDERIAAAVARL  356 (357)
T ss_pred             --------CHHHHHHHHHhCCEEECCccccC---CCCCCeEEEEecC--CHHHHHHHHHhh
Confidence                    23468888989999999876532   2235799999975  689999988765

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK07683 aminotransferase A; Validated

Probab=99.95  E-value=1e-24  Score=215.93  Aligned_cols=336  Identities=13%  Similarity=0.093  Sum_probs=226.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~  154 (457)
                      ..++||..+.+ .+..++.+.+++.+.+......+   ....|..++..++++.+.+..|    .+ ..++++++++|+.
T Consensus        28 ~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~  103 (387)
T PRK07683         28 DNLISLTIGQP-DFPTPSHVKEAAKRAITENYTSY---THNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID  103 (387)
T ss_pred             CCeEEecCCCC-CCCCCHHHHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH
Confidence            46788887654 34446788899998887532211   1112344444444444433324    23 4566667789999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      .++.+++++||.|+++.+.|..+...+...|.++..++.+      |.+++++.+..           +++++++.+++|
T Consensus       104 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~i~i~~p~N  172 (387)
T PRK07683        104 IAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE-----------KTRCVVLPYPSN  172 (387)
T ss_pred             HHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc-----------CceEEEEeCCCC
Confidence            9999999999999999999888888888889998887643      45667666532           346778889999


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      |+|.+.+   +++|.++|+++|+++|+||+|+...++.....+....+. ++ .+|+++||||.+|.+|   ||++++++
T Consensus       173 PtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~-~vi~~~s~SK~~~~pGlRiG~i~~~~~  250 (387)
T PRK07683        173 PTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEM-RE-KTIVINGLSKSHSMTGWRIGFLFAPSY  250 (387)
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCC-cC-CeEEEeeccccccCccceeEEEEcCHH
Confidence            9999987   778899999999999999999865554322222222122 22 2588999999998777   99999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +++.+.... .+.+. ..+.+...++.+.++.-.. .+..+++++++.+.+.+.|++    .++.+..+..+.++++.+.
T Consensus       251 l~~~~~~~~-~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~  324 (387)
T PRK07683        251 LAKHILKVH-QYNVT-CASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGLDVEKPTGAFYLFPSIG  324 (387)
T ss_pred             HHHHHHHHH-HhccC-CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCeeEEEEEecc
Confidence            888876542 23222 2344555555555532111 124566778888899999987    4666553444555665554


Q ss_pred             C-CcchHHHHHHHHHHHHH-HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        382 K-SDDEVASKKLLQTICDM-CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       382 ~-~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      . ..       ...++++. +.++||.+.++..+.   ....+++||++..  ++++++++++.|.+++.+
T Consensus       325 ~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~---~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~~  383 (387)
T PRK07683        325 HFTM-------SSFDFALDLVEEAGLAVVPGSAFS---EYGEGYVRLSYAY--SIETLKEGLDRLEAFLQQ  383 (387)
T ss_pred             cCCC-------CHHHHHHHHHHhCCEEEcCchhhC---CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence            3 22       23456655 456799998876432   1235799999974  789999999999887754

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.95  E-value=5.9e-25  Score=217.14  Aligned_cols=325  Identities=15%  Similarity=0.159  Sum_probs=228.1

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      |+.+++++.+      ++|.+.+++.+.+++. .+.  +..+.+..+...++++.+++++|.+  ..+++++|++++..+
T Consensus        22 ~~~~~~~~~~------~~~~~~~a~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~   92 (373)
T TIGR03812        22 GRILGSMCTN------PHPIAVKAYDMFIETN-LGD--PGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQA   92 (373)
T ss_pred             CcEEEEEeCC------chHHHHHHHHHHhhcC-CCC--cccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHH
Confidence            4556666653      4677888887776653 121  2223456677899999999999975  457888889998888


Q ss_pred             HHhhc------CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        157 IAAYV------KRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       157 i~a~~------~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      +.++.      ++||.|+++.+.|.++...++..|.++..++.+     |++++++.+.+          .+..++++. 
T Consensus        93 ~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~----------~~~~vv~~~-  161 (373)
T TIGR03812        93 VRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDD----------NTIGIVGIA-  161 (373)
T ss_pred             HHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhh----------CcEEEEEEC-
Confidence            76654      467899999999999888888889988887753     78888888754          223455555 


Q ss_pred             CCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCCCCCCccEEEecCcccc-cC--cccEEEecH
Q psy15447        226 VYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGVSTEEVDMIIGSLEHAL-GS--VGGFCVGSS  301 (457)
Q Consensus       226 v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~~~~~~Di~~~s~sK~l-g~--~gG~v~~~~  301 (457)
                      +.+++|.+.|+++|.++|++||+++|+|++|+.+..+-...+.. ....+....+|.+..|.+|+. ++  .||+++.++
T Consensus       162 ~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~  241 (373)
T TIGR03812       162 GTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK  241 (373)
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH
Confidence            46789999999999999999999999999998654321000000 011111125578778899953 22  345667788


Q ss_pred             HHHHHHHhhCCcceec-------CCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC
Q psy15447        302 YIIEHHRLSGSGYCFS-------ASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD  372 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~-------~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~  372 (457)
                      ++++.++.. .++.+.       ++.++..++++.++++.+.+.  ++..+++.++++++++.|++    .++....++.
T Consensus       242 ~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~  316 (373)
T TIGR03812       242 SYLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK----IGFEPVIEPV  316 (373)
T ss_pred             HHHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEcCCC
Confidence            887766422 233222       234556667777888876543  35678999999999999998    3554332345


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .+++.+.+++          ..++.+.|.++||.++....        +.++|++++..+|++|+++++++|++
T Consensus       317 ~~~v~~~~~~----------~~~v~~~L~~~gi~v~~~~~--------~~~iRis~~~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       317 LNIVAFEVDD----------PEEVRKKLRDRGWYVSVTRC--------PKALRIVVMPHVTREHIEEFLEDLKE  372 (373)
T ss_pred             ceEEEEEeCC----------HHHHHHHHHHCCceeccCCC--------CCEEEEEEECCCCHHHHHHHHHHHhh
Confidence            6666665542          23688999999999876432        46899999999999999999999975

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.95  E-value=2.9e-25  Score=223.08  Aligned_cols=327  Identities=17%  Similarity=0.150  Sum_probs=224.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~  154 (457)
                      ...+||+++++ .....|.+.+++.+.+....        .|+......+|++.++++++    .+ ++++++++.+++.
T Consensus        85 ~~~i~L~~g~p-~~~~~p~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~  155 (431)
T PRK15481         85 TPLHDLAGGNP-DPQRLPDLSRYFARLSRTPR--------LYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE  155 (431)
T ss_pred             chhhhhhcCCC-ChhHhHHHHHHHHHhhhhhh--------hcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence            34567766543 22223556666665543211        12222223456666666654    33 4555666668999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      .++.+++++||.|+++.++|..+...++..|.++..++.+    |+++++++++.          ..+.++++.+++|||
T Consensus       156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~----------~~k~i~~~p~p~NPT  225 (431)
T PRK15481        156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ----------GARAVILTPRAHNPT  225 (431)
T ss_pred             HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc----------CCCEEEECCCCCCCC
Confidence            9999999999999999999999999999999998887643    67888887753          223344445899999


Q ss_pred             CCCCChH---HHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        231 ADICPLK---DILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       231 G~i~~l~---~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      |.+.+.+   +|.++|++| ++++|+||+|+....... ...   .....+ ..|+++||||.+| +|   ||+++++++
T Consensus       226 G~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~---~~~~~~-~vi~~~SfSK~~~-~GlRiG~~i~~~~~  299 (431)
T PRK15481        226 GCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSV---IPQTTQ-RWALIRSVSKALG-PDLRLAFVASDSAT  299 (431)
T ss_pred             CccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCC---CcCCCC-CEEEEeeeccccC-CCceeEEEeCCHHH
Confidence            9999964   999999999 999999999875432210 111   111112 3589999999998 55   999999998


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++.+........+  +.+.+...++.++|+.-.   ...+.++.++++.+.+.+.|++    .++.+..+.++.++|+.+
T Consensus       300 ~~~~~~~~~~~~~--~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~----~~~~~~~p~gg~f~~~~l  373 (431)
T PRK15481        300 SARLRLRLNSGTQ--WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ----YGIAIPSPGDGLNLWLPL  373 (431)
T ss_pred             HHHHHHHHhcccc--CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH----cCCccccCCCeEEEEEEC
Confidence            8888643322222  246666666666664211   1124677888889999999988    466654466788888887


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +.+         ..++++.|.++||.+.++..+..  ....+++||+++. .++++++++++.|++++.
T Consensus       374 ~~~---------~~~~~~~l~~~gV~v~pg~~f~~--~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        374 DTD---------SQATALTLAKSGWLVREGEAFGV--SAPSHGLRITLST-LNDAEINRLAADLHQALN  430 (431)
T ss_pred             CCC---------HHHHHHHHHHCCcEEecCCcccc--CCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence            642         24688888899999998764321  1224689999975 579999999999988764

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.95  E-value=1.4e-24  Score=216.71  Aligned_cols=345  Identities=12%  Similarity=0.083  Sum_probs=229.9

Q ss_pred             CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----------CCCcEE
Q psy15447         78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----------GLEETA  144 (457)
Q Consensus        78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----------g~~~~i  144 (457)
                      +|+.++||..+++-   .+...+.+.+++.+.++....  ..+....|..++.+.+++.+.+.+          ..+.++
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~  108 (412)
T PTZ00433         31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQEC--NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVV  108 (412)
T ss_pred             CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCC--CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEE
Confidence            67889999987652   134567889998887765111  112222344444444444444321          123556


Q ss_pred             EecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCc
Q psy15447        145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       145 ~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      +++++++++..++.+++++||.|++..++|..+...++..|.++..++.       .|++++++.+..           +
T Consensus       109 it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----------~  177 (412)
T PTZ00433        109 LCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-----------R  177 (412)
T ss_pred             EeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc-----------C
Confidence            6667779999999999999999999999999988888999988877653       256777766642           3


Q ss_pred             cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447        218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      +++|++.+++||+|.+.+   +++|.++|++||+++|+||+|....++.  ..........+....|+++||||.+|.+|
T Consensus       178 ~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~pG  255 (412)
T PTZ00433        178 TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFDTTVPRVILGGTAKNLVVPG  255 (412)
T ss_pred             ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhccCCCceEEEccchhhcCCCC
Confidence            467778889999999887   6788999999999999999997544432  11111111221212488999999997666


Q ss_pred             ---cEEEe------cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447        295 ---GFCVG------SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQ  363 (457)
Q Consensus       295 ---G~v~~------~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~  363 (457)
                         ||+++      .+++++.+..... ..+  +.+++..+++.+.+..  -....+.+++++++.+.+.+.|++   ..
T Consensus       256 lRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~  329 (412)
T PTZ00433        256 WRLGWLLLVDPHGNGGDFLDGMKRLGM-LVC--GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGE---CI  329 (412)
T ss_pred             eeEEEEEEeCCcccHHHHHHHHHHHhh-ccC--CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhc---CC
Confidence               99886      2456666654321 112  3466666666555532  111134567788888889898887   34


Q ss_pred             CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447        364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       364 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                      ++.+..+.++.++|+.++...-.  ......++++.|++ +||.+.++..+     ...+++|+++..  .++++++.++
T Consensus       330 ~~~~~~p~gg~f~~~~l~~~~~~--~~~~~~~~~~~ll~~~gV~v~pg~~f-----~~~~~iRis~~~--~~e~l~~al~  400 (412)
T PTZ00433        330 GLSPTMPRGSMFLMSRLDLEKFR--DIKSDVEFYEKLLEEENVQVLPGEIF-----HMPGFTRLTISR--PVEVLREAVE  400 (412)
T ss_pred             CCcccCCCeeEEEEEEechhhcC--CCCCHHHHHHHHHHhcCEEEeCcccc-----CCCCeEEEEecC--CHHHHHHHHH
Confidence            66655455677888887531000  00023578888875 79999987643     235799999974  5889999999


Q ss_pred             HHHHHHHHhc
Q psy15447        443 TLCKSHDIAV  452 (457)
Q Consensus       443 ~l~~~~~~~~  452 (457)
                      .|.++++...
T Consensus       401 ~l~~~~~~~~  410 (412)
T PTZ00433        401 RIKAFCERHK  410 (412)
T ss_pred             HHHHHHHHhc
Confidence            9999887543

>PRK03321 putative aminotransferase; Provisional

Probab=99.95  E-value=4.3e-25  Score=216.23  Aligned_cols=316  Identities=12%  Similarity=0.128  Sum_probs=222.6

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-cEEEecccH-HHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-ETALYSFGF-STSASAIA  158 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~  158 (457)
                      .++||..+.. .++..+.+.+++.+.+..+..    +    + .....++++.+|++++.+ ..+++++|+ +++..++.
T Consensus        23 ~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~----y----~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~   92 (352)
T PRK03321         23 GAIKLSSNET-PFGPLPSVRAAIARAAAGVNR----Y----P-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQ   92 (352)
T ss_pred             cceeccCCCC-CCCCCHHHHHHHHHHHHhcCc----C----C-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHH
Confidence            4788887643 344467899998887754321    1    1 123578999999999865 345556665 56677778


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI  233 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i  233 (457)
                      +++++||.|+++.+.+..+....+..|.++..++.+     |++++++.++.           +++++++++++||+|.+
T Consensus        93 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~NPtG~~  161 (352)
T PRK03321         93 ATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-----------RTRLIFVCNPNNPTGTV  161 (352)
T ss_pred             HhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-----------CCCEEEEeCCCCCcCCC
Confidence            888999999999888877766778888888877654     57777776642           34677777899999999


Q ss_pred             CChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447        234 CPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR  308 (457)
Q Consensus       234 ~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~  308 (457)
                      .|.+++.++|++  +++++|+||+|....++...........  ..+..++++||||.+|.+|   ||+++++++++.+.
T Consensus       162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~  239 (352)
T PRK03321        162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR--DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALR  239 (352)
T ss_pred             cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh--hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHH
Confidence            999999999987  5999999999975444321111111111  1122488999999998666   99999999999887


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .....    .+.+++..+++.+++...+...+..+++.++.+++.+.|++    .++.+. ++.++++++.++.      
T Consensus       240 ~~~~~----~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~-~~~g~~i~i~l~~------  304 (352)
T PRK03321        240 KVAVP----FSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRA----AGWTVP-PSQANFVWLPLGE------  304 (352)
T ss_pred             HhcCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCccC-CCCCCEEEEeCCC------
Confidence            54322    23466776666666643322233444555566778888887    465543 4467888887743      


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                         ...++++.|.++||.+.+..         .+.+||+++   +.+++++++++|++++.
T Consensus       305 ---~~~~~~~~l~~~gI~v~~~~---------~~~iRi~~~---~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        305 ---RTADFAAAAAEAGVVVRPFA---------GEGVRVTIG---APEENDAFLRAARAWRA  350 (352)
T ss_pred             ---CHHHHHHHHHHCCEEEEccC---------CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence               23578899999999998632         356999984   89999999999998754

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.95  E-value=1.2e-24  Score=216.58  Aligned_cols=344  Identities=12%  Similarity=0.126  Sum_probs=230.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~  154 (457)
                      |.+++|+..+.+ .+..++.+.+++.+.+.+...   .+....|..++.+++++.+++.+|.+    ++++++++++|+.
T Consensus        32 ~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~  107 (402)
T PRK06107         32 GRSIVDLTVGEP-DFDTPDHIKQAAVAAIERGET---KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF  107 (402)
T ss_pred             cCCEEEcCCCCC-CCCCCHHHHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence            456788887654 344468899999888865221   23333567788888888888877752    3455555678999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|+++.++|..+...+...+..+..++.       .|++++++.+.           ++++++++.+++
T Consensus       108 ~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~l~~p~  176 (402)
T PRK06107        108 LALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-----------PRTRWLILNAPS  176 (402)
T ss_pred             HHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-----------cCceEEEEECCC
Confidence            999889999999999999877776666777766655543       24567776653           244677777889


Q ss_pred             CCCCCCCC---hHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCC--CccEEEecCcccccCcc---cEEE
Q psy15447        228 MNSADICP---LKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTE--EVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~--~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      ||+|.+.+   +++|+++|++| |+++|+||+|+...+....  ......+.++  +..|+++||||.+|.+|   ||++
T Consensus       177 NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~  254 (402)
T PRK06107        177 NPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP--TPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAA  254 (402)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC--CCCHHHhCcCccCCEEEEeccchhhcCcccceeeee
Confidence            99999988   56778889998 9999999999754442211  1111111111  23588999999998665   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++++.+.......  +.+.+.+..+++...|+.-. ..++.++.++++.+.+.+.|++   ..|+.+..+..+.++|
T Consensus       255 ~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~g~~~~~p~gg~~~~  329 (402)
T PRK06107        255 GPADLIAAINKLQSQS--SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA---IPGLSCLVPDGAFYLY  329 (402)
T ss_pred             cCHHHHHHHHHHHHhc--ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc---CCCCcccCCCcceEEe
Confidence            9999998886543222  22345566666655553101 1124566788888889898887   4577665555677777


Q ss_pred             EEecCCcc--hHHHH--HHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        378 LYLQKSDD--EVASK--KLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       378 i~~~~~~~--~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+..-.+  .....  ....+++.++. ++||.+.++..+     ...+++|+++..  ++++++++++.|.++++.+
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F-----g~~~~iRis~~~--~~e~l~~~l~~l~~~l~~~  401 (402)
T PRK06107        330 VNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY-----GLSPYFRLSIAT--SLETLEEACARIERAVAAL  401 (402)
T ss_pred             eecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEeCC--CHHHHHHHHHHHHHHHHhc
Confidence            76631000  00000  02245665554 679999988653     235799999984  7999999999999988664

>PRK08363 alanine aminotransferase; Validated

Probab=99.95  E-value=1.4e-24  Score=216.08  Aligned_cols=340  Identities=11%  Similarity=0.068  Sum_probs=223.7

Q ss_pred             CCeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEec
Q psy15447         78 NGIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYS  147 (457)
Q Consensus        78 ~G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~  147 (457)
                      +|+.++|++.+.+.  .+..++.+.+++.+.+......       |+...-..+|++.+++++    |    .+++++++
T Consensus        28 ~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~-------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~  100 (398)
T PRK08363         28 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNY-------YGPSEGLPELREAIVKREKRKNGVDITPDDVRVTA  100 (398)
T ss_pred             cCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCC-------CCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence            36789999987763  5666788999998887642111       111222355666666654    3    23456666


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec-C------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFK-H------NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~-~------~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ++++|+..++.+++++||.|++..++|..+...+...|..+..++ .      .|++++++.+.           +++++
T Consensus       101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~  169 (398)
T PRK08363        101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-----------EKTKA  169 (398)
T ss_pred             CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-----------cceEE
Confidence            777899999999999999999999999998888888887766652 1      25666666553           23467


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      +++.+++||+|.+.+   +++|.++|++||+++|+||+|+...+........   .+......++++||||.++.+|   
T Consensus       170 v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~---~~~~~~~vi~~~SfSK~~~~~GlRi  246 (398)
T PRK08363        170 IAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPG---SLTKDVPVIVMNGLSKVYFATGWRL  246 (398)
T ss_pred             EEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHH---HcCcCCcEEEEecchhccCCccceE
Confidence            777789999999988   8899999999999999999987544422111111   1212222488899999987666   


Q ss_pred             cEEEe--cHHHHHHHHhhCCcc-eecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447        295 GFCVG--SSYIIEHHRLSGSGY-CFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH  370 (457)
Q Consensus       295 G~v~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~  370 (457)
                      ||+++  ++++++.+....... ....+.+.+...++.+++... +...+.+++++++.+++.+.|++   .+++.+..+
T Consensus       247 G~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p  323 (398)
T PRK08363        247 GYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE---IPGISTTKP  323 (398)
T ss_pred             EEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc---CCCCEecCC
Confidence            99886  666666554321110 011123455545554554311 11124567788888999999987   456666544


Q ss_pred             CCCCeEEEEecCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..+.+.|+.+......     ...+++ +.|.++||.+.++..+.   ...++++|+++.  .++++++++++.|+++++
T Consensus       324 ~g~~~~~~~l~~~~~~-----~~~~~~~~~l~~~gV~v~~g~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~  393 (398)
T PRK08363        324 QGAFYIFPRIEEGPWK-----DDKEFVLDVLHEAHVLFVHGSGFG---EYGAGHFRLVFL--PPVEILEEAMDRFEEFMR  393 (398)
T ss_pred             CeEEEEEEEeccCCCC-----CHHHHHHHHHHhCCEEEeCchhhC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence            4555566566541000     122444 45578899998876432   123579999985  578999999999998876


Q ss_pred             Hh
Q psy15447        450 IA  451 (457)
Q Consensus       450 ~~  451 (457)
                      ..
T Consensus       394 ~~  395 (398)
T PRK08363        394 ER  395 (398)
T ss_pred             Hh
Confidence            53

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.95  E-value=4.3e-25  Score=216.52  Aligned_cols=320  Identities=11%  Similarity=0.093  Sum_probs=228.2

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STSAS  155 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~~~  155 (457)
                      ++.++|+..+.. .++..|.+++++.+.+.......  +    .. ....+|++.+|++++.+  ..+++++|+ +++..
T Consensus        25 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--Y----~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~   96 (356)
T PRK04870         25 ATGMVKLDAMEN-PYRLPAELRAELGERLAEVALNR--Y----PD-PRAAALKAALRAAMGVPAGADVLLGNGSDELIQL   96 (356)
T ss_pred             CCCceeCcCCCC-CCCCCHHHHHHHHHHhhcccccc--C----CC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHH
Confidence            467899987654 45557899999998886422211  1    11 12478899999999854  245566555 67888


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++.+++++||.|++..++|..+...++..|.+++.++.+     |++++++.+..          .++++|++.+++||+
T Consensus        97 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~----------~~~~~v~l~~p~NPt  166 (356)
T PRK04870         97 LALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE----------HRPALVFLAYPNNPT  166 (356)
T ss_pred             HHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc----------CCCCEEEEcCCCCCC
Confidence            888889999999999999999888889999998887643     67888887754          245677777889999


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      |.+.+.+++.++++..++++|+||+|.... +.   ......  ...+..+++.|||| +|.+|   ||+++++++++.+
T Consensus       167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~-~~---~~~~~~--~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~  239 (356)
T PRK04870        167 GNLFDDADVERIIEAAPGLVVVDEAYQPFA-GD---SWLPRL--ARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAEL  239 (356)
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEECCchhhc-Cc---chHHHH--hhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHH
Confidence            999998888888887789999999986321 11   111111  11122588999999 76655   9999999999888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      +.....+    +.+.+..+++..+++..+..++.+++++++.+++.+.|++   .+++.+. +..+.++++.+++     
T Consensus       240 ~~~~~~~----~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~~~~~~~~~~~-----  306 (356)
T PRK04870        240 DKVRPPY----NVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAA---LPGVTVF-PSAANFILVRVPD-----  306 (356)
T ss_pred             HHccCCC----cCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCeEEEEECCC-----
Confidence            6543222    2355555555555543222234567788888899998987   4577654 5567788887652     


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                           ..++.+.|.++||.+++...+.   ....+++|++++   +.+++++++++|+++
T Consensus       307 -----~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRis~~---~~~~~~~l~~al~~~  355 (356)
T PRK04870        307 -----AAAVFDGLKTRGVLVKNLSGMH---PLLANCLRVTVG---TPEENAQFLAALKAA  355 (356)
T ss_pred             -----HHHHHHHHHHCCEEEEECCCCC---CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence                 2367888999999998765321   123579999996   799999999999875

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.95  E-value=5.3e-25  Score=217.79  Aligned_cols=333  Identities=15%  Similarity=0.113  Sum_probs=225.5

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      |+|.++..+    .++.+.+++.+.+..+. ++.+....  .-..+...++++.+++++|.+  .++++++|++++..++
T Consensus         2 yld~aa~~~----~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al   76 (379)
T TIGR03402         2 YLDNNATTR----VDPEVLEAMLPYFTEYF-GNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAI   76 (379)
T ss_pred             cCCCcCCCC----CCHHHHHHHHHHHHhcC-CCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHH
Confidence            455554322    25789999988886532 21111110  112456778889999999965  4677778889998888


Q ss_pred             Hhhc---CCCCEEEEeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        158 AAYV---KRNDAVFVDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       158 ~a~~---~~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      .++.   .+++.|++....|++....   +...|.++..++.     .|++++++.+++           ++++++++++
T Consensus        77 ~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~-----------~~~lv~i~~~  145 (379)
T TIGR03402        77 KSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD-----------DTALVSVMWA  145 (379)
T ss_pred             HHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CcEEEEEEcc
Confidence            7653   4568899998888876543   3335788777753     367888887742           4578889999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE  305 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~  305 (457)
                      +|++|.+.|+++|.++|++||+++++|++|++|...         .++...++|+++.|.+|.+|+.| |++..++... 
T Consensus       146 ~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~-  215 (379)
T TIGR03402       146 NNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIP---------IDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR-  215 (379)
T ss_pred             cCCeeecccHHHHHHHHHHcCCEEEEECcccccccc---------cCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC-
Confidence            999999999999999999999999999999876431         22222456899999999666555 7776665431 


Q ss_pred             HHHhhC------CcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCe
Q psy15447        306 HHRLSG------SGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPL  375 (457)
Q Consensus       306 ~~~~~~------~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~  375 (457)
                       +.+..      ... ..++.+.....+..++++++.+. ++..++.+++.+++++.|++  .++++.+.++..   +.+
T Consensus       216 -~~p~~~g~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~--~~~~~~~~~~~~~~~~~~  291 (379)
T TIGR03402       216 -FRPLLRGGHQERGR-RAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA--RIPDARLNGDPTKRLPNT  291 (379)
T ss_pred             -CCCcccCCccCCCc-CCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--hCCCEEEeCCCccCCCCE
Confidence             11111      001 12344555556666777766543 34456777888888888863  136777765322   235


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------------CCCCeEEEEecCCCCHHHHHHHH
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------------KQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------------~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      +.+.+...        ...++...|.++||.++.+..|.....              ...+.+|++++..+|++|||+++
T Consensus       292 ~~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~  363 (379)
T TIGR03402       292 VNISFEYI--------EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVL  363 (379)
T ss_pred             EEEEecCC--------CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHH
Confidence            55555433        235788888889999988765543110              01368999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy15447        442 ETLCKSHDIAV  452 (457)
Q Consensus       442 ~~l~~~~~~~~  452 (457)
                      ++|+++++.+.
T Consensus       364 ~~l~~~~~~~~  374 (379)
T TIGR03402       364 EVLPPIIARLR  374 (379)
T ss_pred             HHHHHHHHHHH
Confidence            99999887654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PLN02187 rooty/superroot1

Probab=99.95  E-value=8.7e-25  Score=220.07  Aligned_cols=345  Identities=12%  Similarity=0.094  Sum_probs=225.5

Q ss_pred             CCeeeEEeecCCcc--C-CCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEe
Q psy15447         78 NGIPCINFATHNYL--S-FVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALY  146 (457)
Q Consensus        78 ~G~~~id~~s~~~l--~-~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~  146 (457)
                      +++.+|++..+++-  . +...+++.+++.+.++. +...     .|+...-..+|++.+|++++        .++++++
T Consensus        64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-~~~~-----~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it  137 (462)
T PLN02187         64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-GKGN-----SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLT  137 (462)
T ss_pred             CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-CCCC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEe
Confidence            36889999876432  1 33456788888888764 2111     12222223456666666552        3455666


Q ss_pred             cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      +++++++..++.+++++||.|++..++|..+...+...|.++..++.       .|++++++.++.           +++
T Consensus       138 ~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~-----------~~~  206 (462)
T PLN02187        138 AGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE-----------NTV  206 (462)
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC-----------CcE
Confidence            67779999999999999999999999999888788888988877653       257788776532           346


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCcc-
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      ++++.+++||+|.+.+   +++|.++|++||+++|+||+|....++... ..+..   +......|+++||||.++.+| 
T Consensus       207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~---~~~~~~vi~l~SfSK~f~~pGl  283 (462)
T PLN02187        207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGK---FASIVPVLTLAGISKGWVVPGW  283 (462)
T ss_pred             EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHH---hccCCcEEEEecchhhcCCccc
Confidence            7777778899999998   789999999999999999999865553211 11111   111112488999999997666 


Q ss_pred             --cEEEec-H-HH---HHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 --GFCVGS-S-YI---IEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 --G~v~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                        ||++++ + .+   ++.+......+..+.+.+.+..+++.+.++.-  +...+.++.++++.+.+.+.|++   +++.
T Consensus       284 RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~---~~~~  360 (462)
T PLN02187        284 KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD---IPCV  360 (462)
T ss_pred             eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh---CCCC
Confidence              999873 3 22   23333322223333334666666666666421  11134667788889999999988   3333


Q ss_pred             EE-eccCCCCeEEEEecCCcchHHHHHHHHHHHH-HHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        366 LV-QGHRDTPLKYLYLQKSDDEVASKKLLQTICD-MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       366 ~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      .. ..+.++.++++.+.......  .....+++. .+.++||.+.++..+     ...+++||++..  .++.+++.++.
T Consensus       361 ~~~~~P~gg~fl~~~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pG~~f-----g~~~~iRis~~~--~~e~l~~al~r  431 (462)
T PLN02187        361 VCPKKPESCTYLLTKLELSLMDN--IKDDIDFCVKLAREENLVFLPGDAL-----GLKNWMRITIGV--EAHMLEDALER  431 (462)
T ss_pred             cCCCCCCEeEEEEeecChhhCCC--CCCHHHHHHHHHhhCCEEEECcccc-----CCCCeEEEEeCC--CHHHHHHHHHH
Confidence            22 22445677777664210000  001224444 456789999987642     236899999974  68999999999


Q ss_pred             HHHHHHHhcCC
Q psy15447        444 LCKSHDIAVQP  454 (457)
Q Consensus       444 l~~~~~~~~~~  454 (457)
                      |.++++....+
T Consensus       432 L~~~l~~~~~~  442 (462)
T PLN02187        432 LKGFCTRHAKK  442 (462)
T ss_pred             HHHHHHHhhhc
Confidence            99998766544

>KOG0257|consensus

Probab=99.95  E-value=4.8e-26  Score=212.49  Aligned_cols=332  Identities=17%  Similarity=0.195  Sum_probs=234.7

Q ss_pred             cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHHHHHHhhcCCCC
Q psy15447         91 LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        91 l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~~ai~a~~~~gd  165 (457)
                      ..+.....+.+++++.+.....  .-+...||..++...|++++++++|.     +++++++++.+++..++.+++.+||
T Consensus        41 p~~~~P~fv~ea~~~~~~~~~~--~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GD  118 (420)
T KOG0257|consen   41 PDFPPPKFVTEAAKNAAKEPST--NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGD  118 (420)
T ss_pred             CCCCCcHHHHHHHHHHhccchh--ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCC
Confidence            3444456788888888876322  11223467888999999999998873     3456666777999999999999999


Q ss_pred             EEEEeCcccHHHHHHHHhcCCeEEEecCC-------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        166 AVFVDENINFAIQTGLIASRCKVQYFKHN-------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       166 ~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      .|++-++++.++....++.|.+.+.++..             |++++|..+.+           ++++|++++++||+|.
T Consensus       119 eVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-----------kTk~Ii~ntPhNPtGk  187 (420)
T KOG0257|consen  119 EVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-----------KTKAIILNTPHNPTGK  187 (420)
T ss_pred             EEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC-----------CccEEEEeCCCCCcCc
Confidence            99999999999999999999887766533             78999998854           6789999999999999


Q ss_pred             CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      +.+   |++|++||++||+++|.||+|.+.++...-+ .++..-|.  .+..|-++|+||++|..|   ||+++++.++.
T Consensus       188 vfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm--~ertitvgS~gKtf~~TGWrlGW~igp~~L~~  265 (420)
T KOG0257|consen  188 VFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGM--YERTITVGSFGKTFGVTGWRLGWAIGPKHLYS  265 (420)
T ss_pred             ccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCch--hheEEEeccccceeeeeeeeeeeeechHHhhh
Confidence            988   8999999999999999999998766643211 12222232  345688999999999887   99999998888


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHh--h-------CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLK--A-------NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~-------~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      ..+......+|..+ .|.. .|..+++..-.  .       ..++.+.++++++.+.+.|.+    .|+.+..+.+++++
T Consensus       266 ~~~~vh~~~~~~~~-Tp~q-~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~----lg~~v~~p~gayyl  339 (420)
T KOG0257|consen  266 ALFPVHQNFVFTCP-TPIQ-EASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEE----LGLKVTGPEGAYYL  339 (420)
T ss_pred             hHHHHhhccccccC-cHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCceEE
Confidence            87766555566543 3332 22222222111  0       123678899999999999999    68888878888888


Q ss_pred             EEEecCCcch---HHH--HHHHHHHHHHHHHc-CeeEeccccCcc--ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDE---VAS--KKLLQTICDMCIQA-GFAITCPSHLDQ--EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       377 ~i~~~~~~~~---~~~--~~~~~~~~~~l~~~-Gi~v~~~~~~~~--~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      +..+......   +..  .-...+++.++.++ |+.+.|...+..  +.....+.+|++..  -+++-++..++.++
T Consensus       340 ~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~--k~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  340 WADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC--KADETLRKAIERLK  414 (420)
T ss_pred             EEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH--hhHHHHHHHHHHHh
Confidence            8877722111   000  00234577888765 887766554322  11111445676664  35666777776666

>TIGR01814 kynureninase kynureninase

Probab=99.95  E-value=9e-25  Score=217.78  Aligned_cols=329  Identities=12%  Similarity=0.060  Sum_probs=221.2

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      .++.|.++. .+.. ++.+.+++.+.++.++.........  .+......++++ + +++|.+  .+++++|+++++..+
T Consensus        27 ~~iyld~~a-~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~  102 (406)
T TIGR01814        27 AVIYLDGNS-LGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL  102 (406)
T ss_pred             CcEEecCCC-cCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH
Confidence            344444433 3544 6789999998888775433222111  122334444444 4 788854  567777888888888


Q ss_pred             HHhhcCCC---CEEEEeCcccHHHHHH----HHhcCCeE----EEecC-----CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        157 IAAYVKRN---DAVFVDENINFAIQTG----LIASRCKV----QYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       157 i~a~~~~g---d~v~~~~~~h~~~~~~----~~~~g~~~----~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +.++.+++   +.|+++...|.+....    .+..|.++    ..++.     .|++++++.++...        +++++
T Consensus       103 ~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--------~~t~l  174 (406)
T TIGR01814       103 LASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNG--------DDIAV  174 (406)
T ss_pred             HHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcC--------CCeEE
Confidence            88776553   3788888888885443    34556665    33332     17788888886532        46789


Q ss_pred             EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEe
Q psy15447        221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVG  299 (457)
Q Consensus       221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~  299 (457)
                      |+++++++.+|.+.|+++|.++|++||+++++|++|++|...         +++...++|++++|.+|++ |++||++..
T Consensus       175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~---------id~~~~gvD~~~~s~hK~l~g~pG~~l~v  245 (406)
T TIGR01814       175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP---------LDLHDWGVDFACWCTYKYLNAGPGAGAFV  245 (406)
T ss_pred             EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc---------cccccCCCCEEEEcCccccCCCCCeEEEE
Confidence            999999999999999999999999999999999999987642         2333356799999999998 455655444


Q ss_pred             cHHHHHHHHhhCCcc--------------------e-ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHh
Q psy15447        300 SSYIIEHHRLSGSGY--------------------C-FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L  356 (457)
                      .++..+.+.....++                    . ..++.+...+++..++++++.+.  +...++.+++.+++++.|
T Consensus       246 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l  325 (406)
T TIGR01814       246 HEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI  325 (406)
T ss_pred             ehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            333232222110010                    0 12345666777777889988654  456788889999999988


Q ss_pred             hccc-ccCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cC
Q psy15447        357 SQHK-VTQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NI  430 (457)
Q Consensus       357 ~~~~-~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~  430 (457)
                      ++.. ..+++++.++.    .++++.+.++  .       ...++.+.|.++||.+...         ..+.+|+++ +.
T Consensus       326 ~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~-------~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~  387 (406)
T TIGR01814       326 KARCGGPPVLTIITPRDHAQRGCQLSLTHP--V-------PGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPL  387 (406)
T ss_pred             HhhcCCCCceEEeCCCChhhcCCeEEEEec--C-------CHHHHHHHHHHCCEEEecc---------CCCeEEEechhc
Confidence            7721 01357766432    2456666665  1       2357888999999987532         136899999 68


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q psy15447        431 SHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~  448 (457)
                      .+|++||++++++|++++
T Consensus       388 ~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       388 YNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             cCCHHHHHHHHHHHHHHh
Confidence            999999999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.95  E-value=9.7e-25  Score=217.28  Aligned_cols=336  Identities=14%  Similarity=0.134  Sum_probs=224.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      +-|+|.++..+    .++.+.+++.+.+......+. ... ......+..+++++.+++++|.+  .++++++|++++..
T Consensus         4 ~~yld~aa~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~   79 (402)
T TIGR02006         4 PIYLDYAATTP----VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNL   79 (402)
T ss_pred             cEEeeCCcCCC----CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHH
Confidence            35677766432    368899999888865422111 010 11112356778899999999965  56777788889888


Q ss_pred             HHHhh----cCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        156 AIAAY----VKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       156 ai~a~----~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      ++.++    .++||.|+++...|.+.....   ...|.++..++.+     |++++++.+.+           +++++++
T Consensus        80 ~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----------~~~lv~v  148 (402)
T TIGR02006        80 AIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD-----------DTILVSI  148 (402)
T ss_pred             HHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CCEEEEE
Confidence            77664    368999999999999866553   3457888777643     68888877642           4578999


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY  302 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~  302 (457)
                      ++++|++|.+.|+++|.++|++||+++++|++|++|...         .++...++|+++.|.+|.+|+.| |+++.+++
T Consensus       149 ~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~  219 (402)
T TIGR02006       149 MHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGALYVRRK  219 (402)
T ss_pred             ECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEEEEccC
Confidence            999999999999999999999999999999999876542         12222356899999999888644 66666654


Q ss_pred             HHHHHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCC
Q psy15447        303 IIEHHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTP  374 (457)
Q Consensus       303 ~~~~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~  374 (457)
                      ....+.....+     ....++.+...+++..++++.+++. +...++.+++.+++++.|++   ++++.+.++.  ..+
T Consensus       220 ~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~---~~~v~~~~~~~~~~p  296 (402)
T TIGR02006       220 PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS---IEEVYLNGDLEHRVP  296 (402)
T ss_pred             CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCccccCC
Confidence            33222111110     0122345565666666788877543 34567788889999999887   5677665432  122


Q ss_pred             -eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--------------CCCCCeEEEEecCCCCHHHHHH
Q psy15447        375 -LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--------------KKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       375 -~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------~~~~~~lRi~~~~~~t~edi~~  439 (457)
                       +..+.+...        ....+...+  +|+.++.+.++....              ....+.+|++++..+|++|+|+
T Consensus       297 ~~~~v~f~~~--------~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~  366 (402)
T TIGR02006       297 GNLNVSFNYV--------EGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDY  366 (402)
T ss_pred             CeEEEEEeCc--------CHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHH
Confidence             223333321        122444444  488777665543200              0113689999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q psy15447        440 LIETLCKSHDIAV  452 (457)
Q Consensus       440 ~~~~l~~~~~~~~  452 (457)
                      ++++|+++++.++
T Consensus       367 l~~~l~~~~~~~~  379 (402)
T TIGR02006       367 AVKLVKSAIDKLR  379 (402)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999887663

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.95  E-value=8.2e-25  Score=224.05  Aligned_cols=339  Identities=11%  Similarity=0.087  Sum_probs=220.7

Q ss_pred             CCeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc------C--CCcEEEec
Q psy15447         78 NGIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM------G--LEETALYS  147 (457)
Q Consensus        78 ~G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g--~~~~i~~~  147 (457)
                      .|+.+++|+.++.  +++...+++.+++.+.+... ..   +....|.    .+|++.+++++      +  .+++++++
T Consensus       144 ~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~-~~---Y~~~~G~----~~lReaia~~~~~~~~~~~~~~~I~it~  215 (517)
T PRK13355        144 AGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT-EG---YSDSKGL----FSARKAIMQYAQLKGLPNVDVDDIYTGN  215 (517)
T ss_pred             cCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC-CC---CCCCcCh----HHHHHHHHHHHHhcCCCCCChhHEEEeC
Confidence            4788999988554  45655688999988887642 22   2222344    45555555554      2  23455555


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ++++++..++.+++++||.|++..++|..+...+...|.+++.++.       .|++++++.+.           +++++
T Consensus       216 G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~k~  284 (517)
T PRK13355        216 GVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT-----------SRTKA  284 (517)
T ss_pred             cHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC-----------cCceE
Confidence            6668999999999999999999999999888888888988776643       26778877664           24567


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      |++.+++||||.+.+   +++|.++|++||+++|+||+|....+..  ..........++...++++||||.++.+|   
T Consensus       285 i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~--~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~Ri  362 (517)
T PRK13355        285 IVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDG--LEHTSIASLAPDLFCVTFSGLSKSHMIAGYRI  362 (517)
T ss_pred             EEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCC--CCcccHHHhCCCCeEEEEecchhhccCcccce
Confidence            777788999999998   7899999999999999999997544432  11111111223333466799999997665   


Q ss_pred             cEEE--ecHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH---HHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 GFCV--GSSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL---LTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 G~v~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~---~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      ||++  +++++    ++.+..... ..+  ..+.++..++.++|+......+.   ..++.++.+++.+.|++   ++|+
T Consensus       363 G~~i~~~~~~~~~~~~~~l~~~~~-~~~--~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---~~g~  436 (517)
T PRK13355        363 GWMILSGNKRIAKDYIEGLNMLAN-MRL--CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA---IPGI  436 (517)
T ss_pred             EEEEeeCchhhHHHHHHHHHHHhc-CcC--CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence            9988  44443    333322211 112  23455556666665321000111   12445567888888887   4588


Q ss_pred             EEeccCCCCeEEEEecCCc-chHHHHHHHHHH-HHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSD-DEVASKKLLQTI-CDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      .+..+.++.++++.+.... ...    ...++ .+.|.++||.+.++..+.   ....+++|+++.  .+++++++.++.
T Consensus       437 ~~~~p~g~fy~~~~l~~~~~~~~----~~~~~~~~ll~~~gV~v~pg~~F~---~~~~~~~Ris~~--~~~~~l~~a~~r  507 (517)
T PRK13355        437 SAVKPKAAFYIFPKIDVKKFNIH----DDEQFALDLLHDKKVLIVQGTGFN---WDKPDHFRVVYL--PRLEDLEDAMDR  507 (517)
T ss_pred             ccCCCCeeeEEEeecCcccCCCC----CHHHHHHHHHHhCCEEEeCcchhC---CCCcCEEEEEeC--CCHHHHHHHHHH
Confidence            7765555666666665310 000    12234 455667899999876532   124679999994  689999999999


Q ss_pred             HHHHHHHhc
Q psy15447        444 LCKSHDIAV  452 (457)
Q Consensus       444 l~~~~~~~~  452 (457)
                      |.++++..+
T Consensus       508 l~~~~~~~~  516 (517)
T PRK13355        508 LADFFSYYR  516 (517)
T ss_pred             HHHHHHHhh
Confidence            999887543

>PLN02656 tyrosine transaminase

Probab=99.95  E-value=3.3e-24  Score=213.74  Aligned_cols=344  Identities=13%  Similarity=0.086  Sum_probs=226.4

Q ss_pred             CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccH
Q psy15447         78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGF  150 (457)
Q Consensus        78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~  150 (457)
                      .|+.+++|..+++-   .+..++.+.+++.+.+......  ++....|..++.+.+++.+.+..|    .+.++++++++
T Consensus        29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~  106 (409)
T PLN02656         29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFN--GYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCT  106 (409)
T ss_pred             cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChH
Confidence            57889999877652   2445688999988888752211  111122344444444444443323    24567777778


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +++..++.+++++||.|++..++|..+.......|.++..++.       .|++++++.++.           +++++++
T Consensus       107 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~l  175 (409)
T PLN02656        107 QAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ-----------NTVALVI  175 (409)
T ss_pred             HHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc-----------CceEEEE
Confidence            9999999999999999999999998877777778888877653       267777776642           3456677


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      .+++||+|.+.+   +++|.++|++||+++|+||+|+...+..  ........+......|+++||||.++.+|   ||+
T Consensus       176 ~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~  253 (409)
T PLN02656        176 INPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGS--NPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF  253 (409)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence            778999999976   7789999999999999999997544432  11111111112223588999999987665   999


Q ss_pred             Eec--------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        298 VGS--------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       298 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                      +++        +++++.+......  . .+.+.+..+++.+.++..  ....+.++.++++.+.+.+.|++   .+++..
T Consensus       254 i~~~~~~~~~~~~~~~~~~~~~~~--~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~---~~~~~~  327 (409)
T PLN02656        254 VTTDPSGSFRDPKIVERIKKYFDI--L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE---IPCITC  327 (409)
T ss_pred             EEeCcccccccHHHHHHHHHHHhh--h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh---CCCCcC
Confidence            883        5677777543221  1 123566666666666421  11134567788888889998887   333322


Q ss_pred             -eccCCCCeEEEEecCCcchHHHHHHHHH-HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        368 -QGHRDTPLKYLYLQKSDDEVASKKLLQT-ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       368 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                       ..+.++.++|+.++.......  ....+ +.+.|.++||.+.++..+     ...+++||++..  +++++++.++.|+
T Consensus       328 ~~~p~gg~~~w~~l~~~~~~~~--~~~~~~~~~~l~~~gV~v~pg~~f-----g~~~~iRi~~~~--~~e~l~eal~rl~  398 (409)
T PLN02656        328 PHKPEGSMAVMVKLNLSLLEDI--SDDIDFCFKLAREESVIILPGTAV-----GLKNWLRITFAA--DPSSLEEALGRIK  398 (409)
T ss_pred             CcCCCeEEEEEEecchhhcCCC--CCHHHHHHHHHHhCCEEEecchhc-----CCCCeEEEEeCC--CHHHHHHHHHHHH
Confidence             234556778887742100000  01223 445667789999988653     235799999984  7999999999999


Q ss_pred             HHHHHh
Q psy15447        446 KSHDIA  451 (457)
Q Consensus       446 ~~~~~~  451 (457)
                      +++...
T Consensus       399 ~~~~~~  404 (409)
T PLN02656        399 SFYLRH  404 (409)
T ss_pred             HHHHHh
Confidence            887644

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.95  E-value=2e-24  Score=214.48  Aligned_cols=336  Identities=12%  Similarity=0.069  Sum_probs=224.2

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C--cEEE-ecccH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E--ETAL-YSFGF  150 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~--~~i~-~~sG~  150 (457)
                      .|++++||..+.+ .+...+.+.+++.+.+... .   .+....|..++...+++.+.+..|.    +  +.++ +++++
T Consensus        26 ~~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~---~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~  100 (393)
T TIGR03538        26 ASKPPIALSIGEP-KHPTPAFVLEALRENLHGL-S---TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTR  100 (393)
T ss_pred             cCCCeEEecCCCC-CCCCCHHHHHHHHHHhhcc-C---CCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence            4688999988765 4445678888888776431 1   1222334455555555555444332    2  3344 55566


Q ss_pred             HHHHHHHHhhcCCCCE--EEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        151 STSASAIAAYVKRNDA--VFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~--v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +++..++.+++++||.  |+++.++|..+...++..|.++..++..       |++++++.+.+           +++++
T Consensus       101 ~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~-----------~~k~i  169 (393)
T TIGR03538       101 EALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR-----------RCQLL  169 (393)
T ss_pred             HHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh-----------cceEE
Confidence            8999999999999985  8899999988887788889888877642       56777776643           34677


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccc---cccCCCCCCccEEEecCcccccCc
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVT---EYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~---~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      ++.+++||+|.+.+   +++|.++|++||+++|+||+|....+...  .....   ...+....+..|+++||||.++.+
T Consensus       170 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~  249 (393)
T TIGR03538       170 FVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLP  249 (393)
T ss_pred             EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCc
Confidence            77789999999998   67899999999999999999875443311  11111   111111112248899999998766


Q ss_pred             c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447        294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH  370 (457)
Q Consensus       294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~  370 (457)
                      |   ||+++++++++.+......  .+.+.+++...++.+++..-+.....++.++++.+.+.+.|++   .  +.+..+
T Consensus       250 GlRvG~~i~~~~l~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~---~--~~~~~p  322 (393)
T TIGR03538       250 GLRSGFVAGDAEILKAFLRYRTY--HGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQ---V--LDLELP  322 (393)
T ss_pred             ccceEEEecCHHHHHHHHHHHHh--hccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh---h--CcccCC
Confidence            6   9999999998887643321  2223456666666555532111234566778888888888876   2  233345


Q ss_pred             CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccc---cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .++.++|+.++.         ...+++++|+ ++||.+.++..+...   ...+.+++||++..  +++++++++++|++
T Consensus       323 ~gg~f~~~~~~~---------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~  391 (393)
T TIGR03538       323 DAGFYLWPKVPG---------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS  391 (393)
T ss_pred             CeeEEEEEECCC---------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence            678888888762         2346888876 579999988754210   12235799999874  68999999998876


Q ss_pred             H
Q psy15447        447 S  447 (457)
Q Consensus       447 ~  447 (457)
                      .
T Consensus       392 ~  392 (393)
T TIGR03538       392 F  392 (393)
T ss_pred             h
Confidence            4

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.95  E-value=3e-24  Score=210.64  Aligned_cols=291  Identities=17%  Similarity=0.200  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcCCCCE-EEEeCcccHH-HHHHHHhcCCeEEEecC----
Q psy15447        124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVKRNDA-VFVDENINFA-IQTGLIASRCKVQYFKH----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~~gd~-v~~~~~~h~~-~~~~~~~~g~~~~~~~~----  193 (457)
                      .+...++++.+++++|.+    .++++++|++++..++.++..++|. |+.+.++|+. ........|.++..++.    
T Consensus        30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~~  109 (355)
T TIGR03301        30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYE  109 (355)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCCCC
Confidence            477889999999999965    2446789999999999998877765 5556666655 33445667877776653    


Q ss_pred             -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447        194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                       .|++++++.+++.         ++.+++++.++.+++|.+.|+++|.++|++||+++|+|+++++|...         +
T Consensus       110 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~---------~  171 (355)
T TIGR03301       110 PPDLNRIEEALAAD---------PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIP---------I  171 (355)
T ss_pred             CCCHHHHHHHHHhC---------CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcc---------c
Confidence             3788999888652         24456777778888999999999999999999999999998876431         1


Q ss_pred             CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCcce---------------ecCCCcHHHHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSGYC---------------FSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~aaa~a~l~~~  335 (457)
                      .+...++|++++|++|++ |+.| |++++++++++.+.....++.               +..+.+.....++.++++.+
T Consensus       172 ~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~  251 (355)
T TIGR03301       172 DIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEEL  251 (355)
T ss_pred             chhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHH
Confidence            222235689999999998 5555 899999998887652111111               11134666667767778766


Q ss_pred             hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447        336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC  409 (457)
Q Consensus       336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~  409 (457)
                      .+.   ++..++++++.+++.+.|++    .|+.+..+.  .++ ++++.++.....     ...++.++|.++||.+.+
T Consensus       252 ~~~g~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~i~~  322 (355)
T TIGR03301       252 EAEGGVPARIARYRRNRELLVDGLRA----LGFQPLLPERWQSPIIVSFLYPDDPDF-----DFDDFYQELKERGFVIYP  322 (355)
T ss_pred             HHcccHHHHHHHHHHHHHHHHHHHHH----cCCeeecCCCCCCCcEEEEECCCCCcc-----hHHHHHHHHHHCCEEEEC
Confidence            432   45678889999999999988    466654332  233 456666532100     345789999999999987


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +..+      ..+++||+++..+|++|+++++++|+++
T Consensus       323 ~~~~------~~~~iRis~~~~~~~~~i~~~~~~l~~~  354 (355)
T TIGR03301       323 GKLT------LADTFRIGTIGEIDAADIERLLEAIKDA  354 (355)
T ss_pred             Cccc------cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence            6421      1378999998889999999999999875

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.94  E-value=2.7e-24  Score=214.11  Aligned_cols=336  Identities=13%  Similarity=0.108  Sum_probs=218.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-------CCCcEEEecccHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-------GLEETALYSFGFS  151 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-------g~~~~i~~~sG~~  151 (457)
                      |..++||..+.. .+...+.+.+++.+..... ..   +....|.    .++++.+++++       ..+.++++++|++
T Consensus        29 ~~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~-~~---Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~   99 (397)
T PRK07568         29 GIKVYHLNIGQP-DIKTPEVFFEAIKNYDEEV-LA---YSHSQGI----PELREAFAKYYKKWGIDVEPDEILITNGGSE   99 (397)
T ss_pred             CCCEEEecCCCC-CCCCCHHHHHHHHHHhcCC-cC---cCCCCCC----HHHHHHHHHHHHHhCCCCCcceEEEcCChHH
Confidence            345788877653 3333567777776654321 11   1112233    45556666654       2345677778889


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      ++..++.+++++||.|++..++|..+....+..|.++..++..        +++++++.+.           .++++|++
T Consensus       100 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-----------~~~~~v~i  168 (397)
T PRK07568        100 AILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-----------PKTKAILI  168 (397)
T ss_pred             HHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-----------ccceEEEE
Confidence            9999999999999999999888877766677888887776531        3466666653           24567777


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      .+++||+|.+.+   +++|.++|+++|+++|+||+|+...+... ...+....+. +++ .+++.||||.+|.+|   ||
T Consensus       169 ~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~-~~~-~i~~~S~SK~~~~~G~R~G~  246 (397)
T PRK07568        169 SNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL-EDR-VIIIDSVSKRYSACGARIGC  246 (397)
T ss_pred             ECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC-cCC-EEEEecchhhccCCCcceEE
Confidence            788999999987   67899999999999999999875433211 1111111111 222 488999999997554   88


Q ss_pred             EEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC
Q psy15447        297 CVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP  374 (457)
Q Consensus       297 v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  374 (457)
                      ++++ +++++.+...... .+  +.+.+...++.+.++..+. .+++++.++++.+.+.+.|++   ..++.+..+.++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~-~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~g~~  320 (397)
T PRK07568        247 LISKNKELIAAAMKLCQA-RL--SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK---IPGVVCEKPKGAF  320 (397)
T ss_pred             EecCCHHHHHHHHHHhhc-cC--CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCcce
Confidence            8874 6777766433221 12  2344555555455532111 134566788888999999987   4566655445556


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHH------cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQ------AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ++|+.++..        ...+++++|.+      +||.+.++..+........+++|+++.  .++++++++++.|++++
T Consensus       321 ~~~~~l~~~--------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l  390 (397)
T PRK07568        321 YIIAKLPVD--------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEAL  390 (397)
T ss_pred             EEEEecCCC--------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHH
Confidence            677777643        23467777765      599999875432100112469999986  46899999999999988


Q ss_pred             HHhc
Q psy15447        449 DIAV  452 (457)
Q Consensus       449 ~~~~  452 (457)
                      +...
T Consensus       391 ~~~~  394 (397)
T PRK07568        391 EKYN  394 (397)
T ss_pred             HHhh
Confidence            7654

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.94  E-value=5e-25  Score=221.74  Aligned_cols=338  Identities=13%  Similarity=0.120  Sum_probs=229.7

Q ss_pred             eeeEEeec-CCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCcE-E-Ee---cc
Q psy15447         80 IPCINFAT-HNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEET-A-LY---SF  148 (457)
Q Consensus        80 ~~~id~~s-~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i-~~---~s  148 (457)
                      ++.|++.. -|+    -+|.+++++...+. +|+.++.+++...|. ....+++    +++++++|.+.. + +.   +|
T Consensus        34 ~~~l~l~~sen~----~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~-~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~s  108 (452)
T PTZ00094         34 IEGLELIASENF----TSRAVLECLGSCFTNKYAEGLPGNRYYGGN-EVVDKIENLCQKRALEAFGLDPEEWGVNVQPYS  108 (452)
T ss_pred             HcCeeEeccccc----CCHHHHHHhcchhhccccCCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCcccceeecCCCc
Confidence            45677643 333    25889999998884 565566666655554 3334444    588889996532 2 33   68


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh--------cC--CeEEEecCC-----CHHHHHHHHHhhchhcccC
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA--------SR--CKVQYFKHN-----NMQHLEELLRQQDERDTLN  213 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~--------~g--~~~~~~~~~-----d~~~le~~l~~~~~~~~~~  213 (457)
                      |++||..++.++.++||.|+++...|++.......        .+  .++..++++     |++++++.+++.+      
T Consensus       109 gt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~------  182 (452)
T PTZ00094        109 GSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFR------  182 (452)
T ss_pred             hHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhC------
Confidence            99999999999999999999998888776543211        11  223344444     8999999996522      


Q ss_pred             CCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cC
Q psy15447        214 SKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GS  292 (457)
Q Consensus       214 ~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~  292 (457)
                          ++++++.  .+.+|...|+++|.++|+++|+++++|++|++|.++..+.      ....+++|++++|.+|++ |+
T Consensus       183 ----~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~------~~~~~~~D~l~~S~hK~l~GP  250 (452)
T PTZ00094        183 ----PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVL------PSPFPYADVVTTTTHKSLRGP  250 (452)
T ss_pred             ----CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCC------CCCCCCCcEEEcCCccCCCCC
Confidence                2344442  3457899999999999999999999999999988753211      111135799999999988 67


Q ss_pred             cccEEEecHHHHHHHHhhCCcc---eecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        293 VGGFCVGSSYIIEHHRLSGSGY---CFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       293 ~gG~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                      .||++..++.+.+.+.......   .+.++.++...++..++++.+...  ++..+++.++.++|.+.|++    .|+++
T Consensus       251 ~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~----~g~~v  326 (452)
T PTZ00094        251 RSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK----RGYDL  326 (452)
T ss_pred             CceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh----CCcEE
Confidence            7888887766544332221111   233456777778888889888543  35778999999999999988    57777


Q ss_pred             eccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCC----HHHHHHHHH
Q psy15447        368 QGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHT----EQDMNSLIE  442 (457)
Q Consensus       368 ~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t----~edi~~~~~  442 (457)
                      ..+. ..++..+.+....      .....+.+.|.++||++.....|.......++.+|++++..+|    ++|++++++
T Consensus       327 ~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~  400 (452)
T PTZ00094        327 VTGGTDNHLVLVDLRPFG------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVAD  400 (452)
T ss_pred             ecCCCCCceEeecCCcCC------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHH
Confidence            5432 2445555444321      0344677777778999964333321111224789999966665    999999999


Q ss_pred             HHHHHHHH
Q psy15447        443 TLCKSHDI  450 (457)
Q Consensus       443 ~l~~~~~~  450 (457)
                      +|++++..
T Consensus       401 ~l~~~~~~  408 (452)
T PTZ00094        401 FLDRAVKL  408 (452)
T ss_pred             HHHHHHHH
Confidence            99998875

>PRK09105 putative aminotransferase; Provisional

Probab=99.94  E-value=2.3e-24  Score=211.73  Aligned_cols=314  Identities=14%  Similarity=0.149  Sum_probs=221.1

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      +.++++..|.. .++.+|.+.+++.+.+...+.        |+.. ...+|++.+++++|.+  ++++++++++++..++
T Consensus        43 ~~~i~l~~~~~-~~~~~~~~~~a~~~~~~~~~~--------Y~~~-~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~  112 (370)
T PRK09105         43 EGAVFLNANEC-PLGPSPAARDAAARSAALSGR--------YDLE-LEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAV  112 (370)
T ss_pred             CCcEEecCCCC-CCCCCHHHHHHHHHHHHHhcC--------CCCc-hHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHH
Confidence            45677777643 445578999999887764221        2222 2678999999998843  4566666778999999


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      .+++++||.|++..++|..+...++..|.++..++..     |++++++.    .        ++++++++.+++||+|.
T Consensus       113 ~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~----~--------~~~~~v~l~nP~NPTG~  180 (370)
T PRK09105        113 LAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA----D--------PNAGLIYICNPNNPTGT  180 (370)
T ss_pred             HHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc----C--------CCCCEEEEeCCCCCCCc
Confidence            9999999999999999999999999999998887643     45555432    1        23467777888999999


Q ss_pred             CCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        233 ICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       233 i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      +.+.+++.++++.  +++++|+||+|..  ++. +.......+. .++ .+++.||||++|.+|   ||+++++++++.+
T Consensus       181 ~~~~~~l~~l~~~~~~~~~lIvDEaY~~--f~~-~~s~~~~~~~-~~~-vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l  255 (370)
T PRK09105        181 VTPRADIEWLLANKPAGSVLLVDEAYIH--FSD-APSVVDLVAQ-RKD-LIVLRTFSKLYGMAGMRLGLAAARPDLLAKL  255 (370)
T ss_pred             CcCHHHHHHHHHhCCCCcEEEEECchHH--hcc-CcchHHHHhh-CCC-EEEEecccHhhcCCccceeeeecCHHHHHHH
Confidence            9998888887754  4899999999853  221 1111111111 122 378899999998777   9999999999888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      ... .    ..+.+.....++.++++..+..++.+++++++.+++.+.|++    .|+.+. ++.+.++++.++.     
T Consensus       256 ~~~-~----~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~~~f~~~~~~~-----  320 (370)
T PRK09105        256 ARF-G----HNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGYKCT-PSQANCFMVDVKR-----  320 (370)
T ss_pred             Hhc-C----CCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCCcC-CCCCcEEEEeCCC-----
Confidence            654 1    122455555666666643221234567788888999999988    466664 4556666655542     


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                          ...++++.|.++||.+... +     ...++++|+++.   +++++++++++|++++
T Consensus       321 ----~~~~l~~~L~~~gI~v~~~-~-----~~~~~~~Ris~~---~~~~~~~l~~al~~~~  368 (370)
T PRK09105        321 ----PAKAVADAMAKQGVFIGRS-W-----PIWPNWVRVTVG---SEEEMAAFRSAFAKVM  368 (370)
T ss_pred             ----CHHHHHHHHHHCCcEEecC-C-----CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence                3357899999999998432 2     123579999986   6899999999998875

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.94  E-value=3.4e-24  Score=213.46  Aligned_cols=338  Identities=13%  Similarity=0.093  Sum_probs=227.1

Q ss_pred             CeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--------CcEEEec
Q psy15447         79 GIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--------EETALYS  147 (457)
Q Consensus        79 G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~  147 (457)
                      |.++++|..+++-   .+...+++.+++.+.+......      .|+...-..++++.++++++.        +++++++
T Consensus        30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~  103 (403)
T TIGR01265        30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTS  103 (403)
T ss_pred             CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEec
Confidence            6788999877652   3455788999888887642111      122223345677777777652        3567777


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ++++|+..++.+++.+||.|+++.+.|......+...|.++..++.       .|++++++.+..           ++++
T Consensus       104 G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~  172 (403)
T TIGR01265       104 GCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE-----------KTVA  172 (403)
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-----------CccE
Confidence            7889999999999999999999999998877777888888776643       257777776632           3467


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      +++.+++||+|.+.+   +++|.++|+++|+++|+||+|+...++.  ........+.++..-|+++||||.++.+|   
T Consensus       173 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi  250 (403)
T TIGR01265       173 IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFASIVPVLSLGGISKRWVVPGWRL  250 (403)
T ss_pred             EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhccCCcEEEEeecccccCCCcceE
Confidence            777788999999987   7899999999999999999998654432  11111111222222488999999987665   


Q ss_pred             cEEEec--HH-----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 GFCVGS--SY-----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 G~v~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      ||++++  +.     +++.+..... .  ..+.+.+...++.+.++.-  ...++.+++++++.+++.+.|+.   .+++
T Consensus       251 G~~v~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~  324 (403)
T TIGR01265       251 GWIIIHDPHGIFRDTVLQGLKNLLQ-R--ILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKD---IPGL  324 (403)
T ss_pred             EEEEEeCchhhhHHHHHHHHHHHhh-h--hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence            998873  22     3333332211 1  1123556656665555421  11134567788888899999987   4577


Q ss_pred             EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      .+..+.+++++|+.++.....  ......++++.+ .++||.+.++..+     ...+++||++..  .++.+++.++.|
T Consensus       325 ~~~~p~~g~f~~~~~~~~~~~--~~~~~~~~~~~l~~~~gv~v~pg~~f-----~~~~~iRis~~~--~~~~l~~~l~~l  395 (403)
T TIGR01265       325 VCPKPEGAMYLMVKLELELFP--EIKDDVDFCEKLVREESVICLPGSAF-----GLPNWVRITITV--PESMLEEACSRI  395 (403)
T ss_pred             eecCCCceeEEEEeccccccC--CCCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEecC--CHHHHHHHHHHH
Confidence            655566788889887642100  000234677775 4679999987653     236799999974  588899999999


Q ss_pred             HHHHHH
Q psy15447        445 CKSHDI  450 (457)
Q Consensus       445 ~~~~~~  450 (457)
                      .+++++
T Consensus       396 ~~~~~~  401 (403)
T TIGR01265       396 KEFCER  401 (403)
T ss_pred             HHHHHh
Confidence            887754

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.94  E-value=3.4e-25  Score=217.51  Aligned_cols=290  Identities=19%  Similarity=0.255  Sum_probs=209.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+||++++++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+...    ....|.++..++.+|+++
T Consensus        38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~  117 (369)
T cd00614          38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA  117 (369)
T ss_pred             CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence            5788999999999999999999999999999999999999999999999888776543    446688899999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+....         .+ ..+
T Consensus       118 l~~~i~~-----------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~~---------~~-~~g  176 (369)
T cd00614         118 LEAAIKP-----------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQR---------PL-ELG  176 (369)
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcCC---------hh-hhC
Confidence            9888743           45799999999999999999999999999999999999987654311         11 124


Q ss_pred             ccEEEecCcccccC----cccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+|+    .||++++++ ++++.++....  .++..++|..+++++..++.+   +.++++..+++.++.
T Consensus       177 ~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl---~~r~~~~~~na~~la  251 (369)
T cd00614         177 ADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL--ALGTILSPFDAWLLLRGLKTL---PLRMERHSENALKVA  251 (369)
T ss_pred             CcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHH--hhCCCCCHHHHHHHHcCCCCH---HHHHHHHHHHHHHHH
Confidence            58999999999974    368999977 78887765432  245567888888777666543   346788899999999


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~  413 (457)
                      +.|+++..+..+..++              ...+.++.+.++.+.      ..+.++.+.|.--.+..+.+.      +|
T Consensus       252 ~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~  325 (369)
T cd00614         252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGL------EAAKKFLNALKLFSLAVSLGGVESLVEHP  325 (369)
T ss_pred             HHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCH------HHHHHHHHcCCcceEcccCCCCceeeeCC
Confidence            9998843222222211              124778888886322      144555555542111111111      11


Q ss_pred             cc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        414 DQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       414 ~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ..    .        ....++.+|+++.+    ||.+.+++-|++++
T Consensus       326 ~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al  368 (369)
T cd00614         326 ASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL  368 (369)
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence            10    0        01125689999987    56666777766654

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.94  E-value=3.5e-24  Score=210.07  Aligned_cols=318  Identities=12%  Similarity=0.117  Sum_probs=214.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      +|.+++||..|.. .+...|.+.+++.+.+... ..+.        .....+|++.++++++.+  .+++++++++++..
T Consensus        28 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~-~~Y~--------~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~   97 (357)
T PRK14809         28 DPDDLVKLSSNEN-PHGPSPAAVEAIREAAERV-HSYP--------KASHADLTAALADRWDVSPEQVWLANGGDGALDY   97 (357)
T ss_pred             CccceeEecCCCC-CCCCCHHHHHHHHHHHhhh-hcCC--------CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence            4678999998743 3344688888888776542 1111        112467888999988744  34555556689999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---CHH-HHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---NMQ-HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~-~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      ++.+++++||.|++..++|..........|..+..++..   +.+ ++++..+..         .+++++++.+++||||
T Consensus        98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~---------~~~k~i~l~~p~NPTG  168 (357)
T PRK14809         98 LARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY---------DGERIVYLTSPHNPTG  168 (357)
T ss_pred             HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh---------cCCcEEEEeCCCCCCC
Confidence            999999999999999998877666677778777765532   111 122222221         1235677779999999


Q ss_pred             CCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447        232 DICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH  306 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~  306 (457)
                      .+.+.+++.++++..  ++++|+||+|+.....  +. .....  ...+..++++||||.+|.+|   ||+++++++++.
T Consensus       169 ~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~--~~-~~~~~--~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~  243 (357)
T PRK14809        169 SEIPLDEVEALAERTDEETLVVVDEAYGEFAER--PS-AVALV--EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA  243 (357)
T ss_pred             cCCCHHHHHHHHHhCccCcEEEEechhhhccCC--ch-hHHHH--hhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence            999988777777654  7899999999754322  11 11111  11222488999999998766   999999999988


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      +......  +  +.+++.+.++.+++..-+..++.++.++++.+.+.+.|+.    ..    .++.+.++++.+.+    
T Consensus       244 ~~~~~~~--~--~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~g~f~~~~~~~----  307 (357)
T PRK14809        244 YARVNTP--F--AASELACRAGLAALDDDEHVERTVETARWAREYIREELDA----PT----WESAGNFVLAEVGD----  307 (357)
T ss_pred             HHHhCCC--C--CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcC----cc----CCCCCCEEEEECCC----
Confidence            8754322  2  3466766777666632111123455666677777777755    22    14567888887642    


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                            ..++++.|.++||.+.++..+     ...+++|+++.   +++++++++++|+++++
T Consensus       308 ------~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRls~~---~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        308 ------ASAVAEAAQERGVIVRDCTSF-----GLPECIRITCG---TREETERAVEVLNEVLA  356 (357)
T ss_pred             ------HHHHHHHHHHCCEEEEECccC-----CCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence                  236888888999999987643     23579999975   58999999999988764

>PRK09265 aminotransferase AlaT; Validated

Probab=99.94  E-value=3.4e-24  Score=213.62  Aligned_cols=341  Identities=14%  Similarity=0.100  Sum_probs=219.1

Q ss_pred             CCeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc------C--CCcEEEec
Q psy15447         78 NGIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM------G--LEETALYS  147 (457)
Q Consensus        78 ~G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g--~~~~i~~~  147 (457)
                      .|+.++||..++.  +++...+++.+++.+.+... ..   +....|.    .+|++.+|+++      +  .+.+++++
T Consensus        31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-~~---Y~~~~G~----~~lr~~ia~~~~~~~~~~~~~~~i~~t~  102 (404)
T PRK09265         31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-QG---YSDSKGL----FSARKAIMQYYQQKGIPDVDVDDIYIGN  102 (404)
T ss_pred             cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-CC---CCCCCCc----HHHHHHHHHHHhccCCCCCCcccEEEeC
Confidence            4678899987544  34445677888887766431 11   1122233    45666666655      3  23445555


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ++++++..++.+++++||.|++..++|..+...+...|..+..++.       .|++++++.+.           .++++
T Consensus       103 G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~  171 (404)
T PRK09265        103 GVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-----------PRTKA  171 (404)
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-----------ccceE
Confidence            5567888899999999999999999999888888888877765532       25677777663           23567


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      +++.+++||+|.+.+   +++|.++|++||+++|+||+|+...+...  .........++...|+++||||.+|.+|   
T Consensus       172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi  249 (404)
T PRK09265        172 IVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLAPDLLCVTFNGLSKAYRVAGFRV  249 (404)
T ss_pred             EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcCCCceEEEEecchhhccCcccce
Confidence            777788999999999   88999999999999999999875443221  1111111222223478899999997665   


Q ss_pred             cEEEe--cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH---HHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 GFCVG--SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL---LTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 G~v~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~---~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      ||++.  ++.    +++.+..... ..+  +.+.+...++.+++...+...+.   .+++.++.+.+.+.|++   .+++
T Consensus       250 G~~v~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~---~~~~  323 (404)
T PRK09265        250 GWMVLSGPKKHAKGYIEGLDMLAS-MRL--CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNA---IPGV  323 (404)
T ss_pred             EEEEEeCchHHHHHHHHHHHHHhc-ccc--CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhc---CCCC
Confidence            99885  443    3333322111 111  23445555555555311111111   23566778888888877   4577


Q ss_pred             EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .+..+..+.++|+.++......  ......+.+.|.++||.+.++..+.   ....+++|+++.  .++++++++++.|+
T Consensus       324 ~~~~p~~g~~l~~~~~~~~~~~--~~~~~~~~~~l~~~gv~v~pg~~F~---~~~~~~~Ri~~~--~~~e~l~~~l~rl~  396 (404)
T PRK09265        324 SCVKPKGALYAFPKLDPKVYPI--HDDEQFVLDLLLQEKVLLVQGTGFN---WPEPDHFRIVTL--PRVDDLEEAIGRIG  396 (404)
T ss_pred             cccCCCcceEEEEEecccccCC--CCHHHHHHHHHHhCCEEEECchhhC---CCCCCeEEEEeC--CCHHHHHHHHHHHH
Confidence            7665666788888776421000  0023346677888999998876431   123579999994  58999999999999


Q ss_pred             HHHHHhc
Q psy15447        446 KSHDIAV  452 (457)
Q Consensus       446 ~~~~~~~  452 (457)
                      ++++...
T Consensus       397 ~~l~~~~  403 (404)
T PRK09265        397 RFLSGYR  403 (404)
T ss_pred             HHHHHhc
Confidence            9887544

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.94  E-value=2.2e-24  Score=208.95  Aligned_cols=303  Identities=13%  Similarity=0.082  Sum_probs=210.7

Q ss_pred             eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      .+++|+++| ++++... +.+.+   ..+.+|..         +    ..+|++.+++++|.+.+++++++.+++..+. 
T Consensus        20 ~~~i~l~~ne~p~~~~~-~~~~~---~~~~~yp~---------~----~~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~-   81 (330)
T PRK05664         20 ADWLDLSTGIAPWPWPV-PAIPA---DAWARLPE---------T----DDGLEAAARAYYGAPQLLPVAGSQAAIQALP-   81 (330)
T ss_pred             HHheeecCCcCCCCCCC-cccCH---HHHHhCCC---------C----hHHHHHHHHHHhCCCCEEECcCHHHHHHHHH-
Confidence            467999998 6666652 23322   23344321         1    1688999999999987776776678877664 


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---  235 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---  235 (457)
                       .+.+||.|++..++|..+...++..|.++..++.   +++++.++            +.+++++.+++||||.+.+   
T Consensus        82 -~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---~~~~~~~~------------~~~~v~l~nP~NPTG~~~s~~~  145 (330)
T PRK05664         82 -RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---AEVEAALD------------SLDVLVVVNPNNPTGRRFDPAR  145 (330)
T ss_pred             -HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech---hhHhhhhc------------CCCEEEEeCCcCCCCCccCHHH
Confidence             3579999999999999999999999999988864   34554442            1235555567899999998   


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~  312 (457)
                      +.+|.++|+++|+++|+||+|....  + ...+..   ..+.+..++++||||++|.+|   ||+++++++++.+.....
T Consensus       146 l~~l~~~~~~~~~~iI~DE~y~~~~--~-~~s~~~---~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~  219 (330)
T PRK05664        146 LLAWHARLAARGGWLVVDEAFMDNT--P-QHSLAA---CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLG  219 (330)
T ss_pred             HHHHHHHHHhcCCEEEEECCcccCC--C-cccccc---cccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcC
Confidence            5566677789999999999986332  1 111211   212222488999999999777   999999999998875533


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      .+    +.+....+++.++|+........+++++++.+++.+.|++    .++... .+.+.++++.++          .
T Consensus       220 ~~----~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~-~~~~~f~~~~~~----------~  280 (330)
T PRK05664        220 PW----TVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRR----HGLTPA-GGCALFQWVRTE----------D  280 (330)
T ss_pred             CC----CCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH----CCCccc-CCcceEEEEecC----------C
Confidence            22    2355555666666643322234677888889999999988    454321 122245555543          2


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..++.+.|.++||.++...        ..+++||+++.  ++++++++.++|+++.+++
T Consensus       281 ~~~~~~~l~~~gi~v~~f~--------~~~~iRis~~~--~~~~~~~l~~al~~~~~~~  329 (330)
T PRK05664        281 AAALHEFLARRGILTRLFE--------QPASLRFGLPA--DEADWARLDQALLAYRKEA  329 (330)
T ss_pred             HHHHHHHHHHCCeEEEECC--------CCCeEEEECCC--CHHHHHHHHHHHHHHHhhc
Confidence            3578889999999997532        24799999874  6889999999999887654

>PRK06855 aminotransferase; Validated

Probab=99.94  E-value=5.3e-24  Score=213.47  Aligned_cols=348  Identities=10%  Similarity=0.039  Sum_probs=219.2

Q ss_pred             CeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHH
Q psy15447         79 GIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFST  152 (457)
Q Consensus        79 G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a  152 (457)
                      |++++++..+++.  ++..++.+.+++.+.+.+-.  ..++....|..++.+.+++.+.+..|    .+++++++++.++
T Consensus        31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~--~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a  108 (433)
T PRK06855         31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDK--SYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA  108 (433)
T ss_pred             cccccccccCCCcccCCCCCHHHHHHHHHHhhcCC--CCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence            5667777554442  45556778888888775421  11222234555666666666655444    2345666666788


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHH-HhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGL-IASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~-~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      +..++. ++.+||.|++..++|..+.... ...|.+++.++.       .|++++++.+++.         ++++++++.
T Consensus       109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~---------~~~~~i~l~  178 (433)
T PRK06855        109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN---------PSIAGILLI  178 (433)
T ss_pred             HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC---------CCceEEEEE
Confidence            887774 7899999999999988755432 334666655432       2789998888642         234666666


Q ss_pred             cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +++||||.+.+   +++|.++|++||+++|+||+|+...+..  ........+.++...|+++||||.++.+|   ||++
T Consensus       179 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii  256 (433)
T PRK06855        179 NPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIE  256 (433)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEE
Confidence            78999999998   6688888999999999999997654422  11111122223323489999999997655   9998


Q ss_pred             ec-----H---HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        299 GS-----S---YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       299 ~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                      ++     +   .+++.+..... ...  +.+.+...++.+.++.-  + ..++.++.++++.+.+.+.|++   .+++.+
T Consensus       257 ~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~---~~~~~~  330 (433)
T PRK06855        257 VYNADKDEVFKKYINSILNAKM-IEV--CSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKD---VPGLKV  330 (433)
T ss_pred             EeCCchhhHHHHHHHHHHHhhc-ccc--CCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeec
Confidence            62     2   23333322211 111  23555556555555311  1 1124567788888889898877   457766


Q ss_pred             eccCCCCeEEEEecCCc---------ch-HHHH----------HHHHHHHHH-HHHcCeeEeccccCccccCCCCCeEEE
Q psy15447        368 QGHRDTPLKYLYLQKSD---------DE-VASK----------KLLQTICDM-CIQAGFAITCPSHLDQEAKKQKPSIRI  426 (457)
Q Consensus       368 ~~~~~~~~~~i~~~~~~---------~~-~~~~----------~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~~~lRi  426 (457)
                      ..+.++.++|+.++...         .. +...          ....+++.. +.++||.+.|+..+.    ...+.+||
T Consensus       331 ~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~----~~~~~~Rl  406 (433)
T PRK06855        331 NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFC----TELNGFRV  406 (433)
T ss_pred             cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCC----CCCCceEE
Confidence            54556778888876421         00 0000          012345544 556799999886532    22356999


Q ss_pred             EecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        427 TCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +++. .++++|++.++.|.+++++.
T Consensus       407 s~~~-~~~~~i~~~~~~l~~~~~~~  430 (433)
T PRK06855        407 TLLE-RDEEKFEWIYQTLAEKIEEY  430 (433)
T ss_pred             EECC-CcHHHHHHHHHHHHHHHHHH
Confidence            9976 58999999999999988754

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.94  E-value=5.2e-24  Score=209.85  Aligned_cols=322  Identities=11%  Similarity=0.073  Sum_probs=221.1

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      +..++||+.|... +...+.+.+++.+...... .       |+.... .+|++.+++++|.+  +.++++++++++..+
T Consensus        35 ~~~~i~l~~~~~~-~~~~~~~~~al~~~~~~~~-~-------Y~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~  104 (371)
T PRK05166         35 VPRIAKLGSNENP-LGPSPAVRRAFADIAELLR-L-------YPDPQG-RALREAIAARTGVPADRIILGNGSEDLIAVI  104 (371)
T ss_pred             CcceEEcCCCCCC-CCCCHHHHHHHHHHHHHhh-c-------CCCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHH
Confidence            4578999987432 3456788888876544321 1       111111 37889999998854  344455556788888


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +.+++++||.|++..+.|......++..|.++..++..     |++++++.+.+           .++++++.+++||+|
T Consensus       105 ~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-----------~~~~v~l~~p~NPtG  173 (371)
T PRK05166        105 CRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR-----------APRMLMFSNPSNPVG  173 (371)
T ss_pred             HHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc-----------CCCEEEEeCCCCCCC
Confidence            88899999999999999998888888889888877653     57888777643           335777899999999


Q ss_pred             CCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHH
Q psy15447        232 DICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIE  305 (457)
Q Consensus       232 ~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~  305 (457)
                      .+.+.+++.++++.  +++++|+||+|.....+...........- .....|+++||||.+|.+|   ||++ .++++++
T Consensus       174 ~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~  252 (371)
T PRK05166        174 SWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKA-RGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVG  252 (371)
T ss_pred             CCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhh-cCCCEEEEeechHhhhcchhheeeeecCCHHHHH
Confidence            99998777776653  48899999998755433211111111110 1112488999999998666   9966 4788888


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .+......  +  +.+.+...++.+++..-...++.++.++++.+++.+.|++    .|+.+. ++.+.++|+.+..   
T Consensus       253 ~~~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-p~~g~fl~~~~~~---  320 (371)
T PRK05166        253 LLDRVRTP--F--NVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAE----MGYRIA-PSRANFLFFDARR---  320 (371)
T ss_pred             HHHHhccC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CcCeeC-CCcCCEEEEeCCC---
Confidence            77643321  2  2356665566665532211233556777788889999988    466653 5567788777543   


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                            ...++++.|.++||.+.++..     +...+++||+++   +.++.+++.++|++++
T Consensus       321 ------~~~~l~~~l~~~gi~v~p~~~-----~~~~~~iRi~~~---~~~~~~~l~~~l~~i~  369 (371)
T PRK05166        321 ------PASAVAEALLRQGVIVKPWKQ-----PGFETFIRVSIG---SPEENDHFVAALDKVL  369 (371)
T ss_pred             ------CHHHHHHHHHHCCeEEecCCC-----CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence                  235788999999999988653     233689999996   6888999999998764

>PRK07337 aminotransferase; Validated

Probab=99.94  E-value=6.1e-24  Score=210.77  Aligned_cols=338  Identities=12%  Similarity=0.097  Sum_probs=221.1

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~  154 (457)
                      |..+++|..+.. .+...|.+.+++.+.+......   +....|..++...+++.+.+..|.    +++++++++++|+.
T Consensus        29 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~---Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~  104 (388)
T PRK07337         29 GRDIIHMGIGEP-DFTAPEPVVEAAARALRRGVTQ---YTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL  104 (388)
T ss_pred             CCCEEEeCCcCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH
Confidence            345788877654 3434578888888877642111   111223334444444444333342    45667777789999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|++..++|......+...|.++..++.+       |++++++.+.           +++++|++.+++
T Consensus       105 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~l~~p~  173 (388)
T PRK07337        105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-----------ERTRGVLLASPS  173 (388)
T ss_pred             HHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-----------ccceEEEEECCC
Confidence            8999999999999999999999888888888888777642       4666766553           245677778889


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +++|.++|++||+++|+||+|....+.......   .... ++ .|+++||||.+|.+|   ||+++++
T Consensus       174 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~---~~~~-~~-vi~~~S~SK~~~~~G~RiG~~~~~~  248 (388)
T PRK07337        174 NPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA---LSLG-DD-VITINSFSKYFNMTGWRLGWLVVPE  248 (388)
T ss_pred             CCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh---hhcc-CC-EEEEEechhhcCCchhheeeeecCH
Confidence            99999988   678889999999999999998643332211111   1121 22 367899999997655   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYL  378 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i  378 (457)
                      ++++.+......+..  +.+.+...++.+.++.  +....+.++.++++.+++.+.|++    .++.+ ..+.++.++|+
T Consensus       249 ~l~~~l~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~~~~p~~g~f~~~  322 (388)
T PRK07337        249 ALVGTFEKLAQNLFI--CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES----LGFKVPVMPDGAFYVYA  322 (388)
T ss_pred             HHHHHHHHHHHHhcc--CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh----cCCccccCCCeeEEEEE
Confidence            888887654322222  2345555555555431  111234567788888899999988    45543 23456788888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++.....  ......+++++++ ++||.+.++..+..  ....+++|++++.  +++++++.++.|.+++
T Consensus       323 ~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~pg~~f~~--~~~~~~~Ri~~~~--~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        323 DCRGVAHP--AAGDSAALTQAMLHDAGVVLVPGRDFGP--HAPRDYIRLSYAT--SMSRLEEAVARLGKLF  387 (388)
T ss_pred             ecccccCC--CCCCHHHHHHHHHHhCCEEEeCchhhCC--CCCCCEEEEEecC--CHHHHHHHHHHHHHHh
Confidence            87631000  0002356777754 67999988764321  1235799999985  6889999998887754

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.94  E-value=1e-23  Score=195.09  Aligned_cols=329  Identities=15%  Similarity=0.144  Sum_probs=240.8

Q ss_pred             CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEec-ccHHHHHHHHHhhcCCCCEE
Q psy15447         92 SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYS-FGFSTSASAIAAYVKRNDAV  167 (457)
Q Consensus        92 ~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~-sG~~a~~~ai~a~~~~gd~v  167 (457)
                      .+...|+|++|+.+.++. |+  .|++  +++.++..++.....+-.+.   +..++++ +---++..+|++++++||.|
T Consensus        36 Df~~pp~i~~Al~~rvdh-Gv--fGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~V  110 (388)
T COG1168          36 DFPTPPEIIEALRERVDH-GV--FGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGV  110 (388)
T ss_pred             cCCCCHHHHHHHHHHHhc-CC--CCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCee
Confidence            445579999999999976 32  2232  44566777777777776552   2445555 55589999999999999999


Q ss_pred             EEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---h
Q psy15447        168 FVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---L  236 (457)
Q Consensus       168 ~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l  236 (457)
                      ++..|.|......+...|.++...|..        |+++||+.+.+          ++++++++++++||+|.+-.   |
T Consensus       111 vi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~----------~~vkl~iLCnPHNP~Grvwt~eeL  180 (388)
T COG1168         111 VIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD----------ERVKLFILCNPHNPTGRVWTKEEL  180 (388)
T ss_pred             EecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc----------CCccEEEEeCCCCCCCccccHHHH
Confidence            999999999999999999888876532        89999999976          45679999999999999976   8


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC--CccEEEecCcccccCcc---cE-EEecHHHHHHHHhh
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE--EVDMIIGSLEHALGSVG---GF-CVGSSYIIEHHRLS  310 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~--~~Di~~~s~sK~lg~~g---G~-v~~~~~~~~~~~~~  310 (457)
                      .+|.+||.+||+++|.||+|+-.+++.+-  ......+++.  +..|.+.|-||+|..+|   ++ ++.++++.+++...
T Consensus       181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~--h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~  258 (388)
T COG1168         181 RKIAELCLRHGVRVISDEIHADLVLGGHK--HIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR  258 (388)
T ss_pred             HHHHHHHHHcCCEEEeecccccccccCCC--ccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH
Confidence            89999999999999999999876665321  2222223332  34477788899997654   44 56667664444222


Q ss_pred             CCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        311 GSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      .. .......+.++.-|..++.+.=+.. +++.+.++.|.+++.+.|.+.  ++++.+..+.++.+.|+.+..-.-    
T Consensus       259 l~-~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~--~P~v~v~~p~gTYL~WLD~r~l~l----  331 (388)
T COG1168         259 LK-RNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH--LPGVKVTEPQGTYLAWLDCRELGL----  331 (388)
T ss_pred             HH-HhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh--CCCcEEecCCCceeeeeeccccCC----
Confidence            11 1233346888877777776543322 467889999999999999873  479999878888899998764320    


Q ss_pred             HHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        390 KKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       390 ~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                        ...++.+.|+++ +|.+.++..+.   ..+.+.+|+.+.  .+++-++++++.|+.+++..
T Consensus       332 --~d~~l~~~ll~~akVal~~G~~FG---~~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~  387 (388)
T COG1168         332 --DDSELAEFLLEEAKVALSPGSTFG---EEGSGFVRLNFA--CPRAILEEALERLKRALKKR  387 (388)
T ss_pred             --ChHHHHHHHHHhhcEeccCCCccC---cCCCceEEEecC--CCHHHHHHHHHHHHHHHhcc
Confidence              224677888876 89888776543   244678998764  68999999999998877653

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.94  E-value=2.2e-24  Score=209.12  Aligned_cols=283  Identities=13%  Similarity=0.080  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHH
Q psy15447        126 VHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELL  203 (457)
Q Consensus       126 ~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l  203 (457)
                      ...+|++.+|+++|.+  .+++++++++++..++. +.+++++|+. .++|..+...++..|.++..++.++.+...+.+
T Consensus        41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~vv~~-~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l  118 (332)
T PRK06425         41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGNIIIV-EPNFNEYKGYAFTHGIRISALPFNLINNNPEIL  118 (332)
T ss_pred             CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCcEEEe-CCChHHHHHHHHHcCCeEEEEeCCcccCcHHHH
Confidence            4689999999999965  33444555578887776 4677765555 789999999999999999988764321112333


Q ss_pred             HhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCcc
Q psy15447        204 RQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVD  280 (457)
Q Consensus       204 ~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~D  280 (457)
                      ++          .+++++++.+++||||.+.+   +.+|.++|++||+++|+||+|....... ........+-  .+..
T Consensus       119 ~~----------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~-~~~~~~~~~~--~~~v  185 (332)
T PRK06425        119 NN----------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR-AEEDVLLNRS--YGNV  185 (332)
T ss_pred             hh----------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-chhHHHHhcc--CCCE
Confidence            32          13456667799999999998   5677888899999999999987543321 0111111111  1225


Q ss_pred             EEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        281 MIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       281 i~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                      |+++||||++|.+|   ||+++++++++.+......+    +.+..++++ +.........+..++.++++.+++.+.|+
T Consensus       186 i~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~----~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~  260 (332)
T PRK06425        186 IIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW----SVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLE  260 (332)
T ss_pred             EEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC----ccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999776   99999999999887543322    123333222 22222111112457788889999999998


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      +    .|+.+..++.+.++++.+++          ..++++.|+++||.++++..+.   ..+.+++||++.   +++++
T Consensus       261 ~----~g~~~~~~~~g~f~~~~~~~----------~~~~~~~l~~~gi~v~~~~~f~---~~~~~~iRis~~---~~~~~  320 (332)
T PRK06425        261 A----MGFRAAGDPSANFITFMIPD----------AHDFYSYLLKNGILVRLLDDYE---CLGEQYIRIAIR---RRSFN  320 (332)
T ss_pred             H----CCCEECCCCCceEEEEEcCC----------HHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC---CHHHH
Confidence            8    47766545567788887652          2468899999999998875421   122479999996   79999


Q ss_pred             HHHHHHHHHHH
Q psy15447        438 NSLIETLCKSH  448 (457)
Q Consensus       438 ~~~~~~l~~~~  448 (457)
                      ++++++|++++
T Consensus       321 ~~l~~al~~~~  331 (332)
T PRK06425        321 IKLVNALRNFL  331 (332)
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.94  E-value=6.3e-24  Score=208.09  Aligned_cols=322  Identities=12%  Similarity=0.079  Sum_probs=218.1

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      ++++++||+.|.. .++.++.+.+++.+.+.... .       |.. ....+|++.+|++++.+  ++++++++++++..
T Consensus        18 ~~~~~i~l~~~~~-~~~~p~~~~~a~~~~~~~~~-~-------y~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~   87 (356)
T PRK08056         18 SPDQLLDFSANIN-PLGMPVSLKRAIIDNLDCAE-R-------YPD-VEYRHLHQALARHHQVPASWILAGNGETESIFA   87 (356)
T ss_pred             ChhhEEEeccccC-CCCCCHHHHHHHHHHHHhcc-c-------CcC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence            5678999998743 24456889999988776532 1       111 12578999999998854  44555555678877


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHH-HHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQ-HLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~-~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ++.++ .+|+. ++..+.+..+...++..|.++..++..     +++ ++.+.+.           +++++|++.+++||
T Consensus        88 ~~~~l-~~g~v-iv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-----------~~~k~v~l~~p~NP  154 (356)
T PRK08056         88 VVSGL-KPRRA-MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALT-----------PDLDCLFLCTPNNP  154 (356)
T ss_pred             HHHHh-CCCCE-EEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhcc-----------CCCCEEEEeCCcCC
Confidence            77776 56775 445677777777788889988887642     122 2222221           34567778899999


Q ss_pred             CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe-cHH
Q psy15447        230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG-SSY  302 (457)
Q Consensus       230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~  302 (457)
                      ||.+.+   +++|.++|++||+++|+||+|....+.  +.........  .+.+++++||||++|.+|   ||+++ ++.
T Consensus       155 TG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~  230 (356)
T PRK08056        155 TGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD--ETGFIPQLAD--NPHLWVLRSLTKFYAIPGLRLGYLVNSDDA  230 (356)
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc--chHHHHHhcc--CCCEEEEEechhhccCcchhheeeecCCHH
Confidence            999998   788999999999999999998643322  1111111111  123688999999998665   99887 467


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +++.+......    .+.+.+...++.+.++.-....+.++.++++.+++.+.|++   ++++.+. ++.++++++.+..
T Consensus       231 ~~~~l~~~~~~----~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~~~~~~~~~~~  302 (356)
T PRK08056        231 AVARMRRQQMP----WSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCA---LPLLTVW-PGRANYLFLRCER  302 (356)
T ss_pred             HHHHHHHhCCC----CchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEc-CCCCcEEEEEcCC
Confidence            77777643322    23355555555555531111124567788889999999987   4566654 5567888887753


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +         ..++++.|+++||.++++..+.   ....+++||++.   ++++.++++++|+++++
T Consensus       303 ~---------~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~~  354 (356)
T PRK08056        303 P---------DIDLQRALLTQRILIRSCANYP---GLDSRYYRVAIR---SAAENERLLAALRNVLT  354 (356)
T ss_pred             C---------hHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEEc---CHHHHHHHHHHHHHHHc
Confidence            2         2468899999999998775421   123469999986   78999999999988753

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.94  E-value=8.3e-24  Score=208.02  Aligned_cols=290  Identities=16%  Similarity=0.188  Sum_probs=209.2

Q ss_pred             hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcCCCCE-EEEeCcccHHH-HHHHHhcCCeEEEecC----
Q psy15447        124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVKRNDA-VFVDENINFAI-QTGLIASRCKVQYFKH----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~~gd~-v~~~~~~h~~~-~~~~~~~g~~~~~~~~----  193 (457)
                      .+..+++++.+++++|.+    .+++++||++++..++.++..++|. |+....+|+.. ...++..|.++..++.    
T Consensus        34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~  113 (363)
T TIGR02326        34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEVE  113 (363)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCCC
Confidence            556788899999999975    2566788899999999888777765 55566666664 3445667877776654    


Q ss_pred             -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447        194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                       .|++++++.+++.         ...+++.+.++.+++|.+.|+++|.++|++||+++|+|+++++|...         .
T Consensus       114 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~---------~  175 (363)
T TIGR02326       114 PPDVVEVEAILAAD---------PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIP---------I  175 (363)
T ss_pred             CCCHHHHHHHHhhC---------CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcc---------c
Confidence             2788999888752         23456777788889999999999999999999999999999876432         1


Q ss_pred             CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCc------------------ceecCCCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSG------------------YCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~aaa~a~l  332 (457)
                      ++...++|++++|++|++ |+.| |+++.+++.++.+.....+                  +.|+  .++....+..+++
T Consensus       176 ~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft--~~~~~~~al~~al  253 (363)
T TIGR02326       176 DIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFT--SPTHVVHAFAQAL  253 (363)
T ss_pred             chhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCC--CcHHHHHHHHHHH
Confidence            222235689999999998 5556 9999998877765321111                  1233  3555666666777


Q ss_pred             HHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCee
Q psy15447        333 HLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       333 ~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      +.+.+.   +++.++++++.+++++.|++    .|+.+..+.  .+++ .++.+......     ...++.+.|.++||.
T Consensus       254 ~~l~~~g~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~L~~~gi~  324 (363)
T TIGR02326       254 LELEKEGGVAARHQRYQQNQKTLVAGMRA----LGFEPLLDDEIQSPIITSFYSPEDPDY-----RFADFYQRLKEQGFV  324 (363)
T ss_pred             HHHHHhhCHHHHHHHHHHHHHHHHHHHHH----cCCeeccCcccCCceEEEEECCCCCCC-----CHHHHHHHHHHCCEE
Confidence            665432   35778999999999999988    466654322  3443 45555542100     345788999999999


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ++++..+      ..+.+|+++...+|.+|+++++++|++++
T Consensus       325 v~~g~~~------~~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       325 IYPGKVS------QVDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             EECCcCC------CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            9876531      24789999877789999999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.94  E-value=8.8e-24  Score=208.35  Aligned_cols=324  Identities=15%  Similarity=0.150  Sum_probs=216.1

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------C--CcEEEeccc
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------L--EETALYSFG  149 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~--~~~i~~~sG  149 (457)
                      ..++++.+|.+ .+...|.+.+++.+.+.. +.....+.. .|    ..+|++.++++++        .  +.+++++++
T Consensus        28 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~Y~~-~G----~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga  100 (374)
T PRK02610         28 IQLDRLDTNEF-PYDLPPDLKQKLAWLYQQ-GIESNRYPD-GG----HEALKQAIAEYVNESAAGSSQITPANISVGNGS  100 (374)
T ss_pred             cceeEecCCCC-CCCCCHHHHHHHHHHHhh-cccccCCCC-Cc----hHHHHHHHHHHhCccccccCCCCHHHEEEcCCh
Confidence            45889988765 455568899999887765 110011111 23    3566677777665        2  234444555


Q ss_pred             HHHHHHHHHhhcCCCC-EEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        150 FSTSASAIAAYVKRND-AVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd-~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      .+++..++.+++.+|| .|++..++|..+...++..|.++..++.      .|++++++.+++..       ..++++|+
T Consensus       101 ~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~-------~~~~k~i~  173 (374)
T PRK02610        101 DELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQ-------NPPVRVVF  173 (374)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhc-------CCCceEEE
Confidence            5788777777777775 8999999999999999999999887763      26788888876421       12456777


Q ss_pred             EecCCCCCCCCCChHHHHHHHH-HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        223 VEGVYMNSADICPLKDILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +.+++||||.+.+.+++.++.+ .+++++|+||+|..... .   .......-. ++ .|+++||||++|.+|   ||++
T Consensus       174 l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~-~---~~~~~~~~~-~~-~ivi~SfSK~~g~~GlRiG~~v  247 (374)
T PRK02610        174 VVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQ-T---TLVGELAQH-PN-WVILRTFSKAFRLAAHRVGYAI  247 (374)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCc-c---chHHHHhcC-CC-EEEEEecchhccCcccceeeee
Confidence            7788999999999766655543 24899999999864321 1   111111111 12 378999999998766   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      +++++++.+......  +  +.+.+...++.++++..+...+.+.+..+..+.+.+.|++   ++++.+. ++.+.++|+
T Consensus       248 ~~~~l~~~l~~~~~~--~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-p~~g~f~~~  319 (374)
T PRK02610        248 GHPELIAVLEKVRLP--Y--NLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQE---LPQLRVW-PSAANFLYL  319 (374)
T ss_pred             cCHHHHHHHHHhcCC--C--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEeC-CCcceEEEE
Confidence            999999888654422  2  2355555555555543222112223334445667777766   4566653 567888888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .++...       ...++++.|.++||.+++.          .+++||++.   +.+++++++++|+++++.+
T Consensus       320 ~l~~~~-------~~~~~~~~l~~~gi~v~~~----------~~~lRls~~---~~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        320 RLSQDA-------ALAALHQALKAQGTLVRHT----------GGGLRITIG---TPEENQRTLERLQAALTQL  372 (374)
T ss_pred             eCCCCC-------CHHHHHHHHHHCCEEEEeC----------CCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence            876543       4567888899999998642          368999986   4678999999999887654

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.94  E-value=7.3e-24  Score=209.83  Aligned_cols=323  Identities=15%  Similarity=0.136  Sum_probs=216.1

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHH---HHhhcCC---CcEEEecccHHHHHHHHHhhc-----CC-
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLEND---IASFMGL---EETALYSFGFSTSASAIAAYV-----KR-  163 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~---la~~~g~---~~~i~~~sG~~a~~~ai~a~~-----~~-  163 (457)
                      ++.+.+++.+.++.+...+. +...++ ......+++.   +++.++.   +.+++++++++++..++.++.     ++ 
T Consensus        12 ~~~v~~~~~~~~~~~~~n~~-~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~   89 (382)
T TIGR03403        12 DPKVKELMDPFFCDIYGNPN-SLHQFG-TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGG   89 (382)
T ss_pred             CHHHHHHHHHHHHhcCcCCc-cccHHH-HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCC
Confidence            57899999998876433322 222222 1223334444   4444442   456677777889888887652     44 


Q ss_pred             CCEEEEeCcccHHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        164 NDAVFVDENINFAIQTG---LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       164 gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      ++.|++....|++....   +...|.++..++.+     |++++++.+..           +++++++++++|++|.+.|
T Consensus        90 ~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-----------~t~lv~~~~~~n~tG~~~~  158 (382)
T TIGR03403        90 KNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE-----------KTALVSVMWANNETGMIFP  158 (382)
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc-----------CCeEEEEEcccCCCccccC
Confidence            46899888888776544   34568888877653     67778777642           4578889999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHH-HHHHh-h--
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYII-EHHRL-S--  310 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~-~~~~~-~--  310 (457)
                      +++|.++|++||+++++|++++.|...         .++...++|+++.|++|.+|+.| |++..++... ..... .  
T Consensus       159 ~~~I~~la~~~g~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g~~~  229 (382)
T TIGR03403       159 IKEIGEICKERGVLFHTDAVQAIGKIP---------VDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHGGEH  229 (382)
T ss_pred             HHHHHHHHHHcCCEEEEechhhcCCCc---------cCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccCCCC
Confidence            999999999999999999998865331         12222456899999999888665 6665554321 00000 0  


Q ss_pred             CCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeEEEEecCCcch
Q psy15447        311 GSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLKYLYLQKSDDE  386 (457)
Q Consensus       311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~  386 (457)
                      ...+ ..++.+.....++.++++...+. +...++++++.+++.+.|++   ++++.+..+..   .+++.+.+...   
T Consensus       230 ~~~~-~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~---  302 (382)
T TIGR03403       230 MGGR-RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLE---LPDVFVVGDREHRVPNTILISIKGV---  302 (382)
T ss_pred             CCCc-ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc---CCCEEEECCCCCCcCCEEEEEeCCC---
Confidence            0001 12345666665666677665442 34567888899999999987   57888875432   34556666542   


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccc----------cC----CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQE----------AK----KQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~----~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                           ....+.+.|.++||.++.+..|...          ..    ...+.+|++++..+|++|||+++++|+++++.++
T Consensus       303 -----~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       303 -----EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             -----CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                 3446777788999999976544310          00    0135799999999999999999999999887764

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.94  E-value=3.9e-24  Score=213.39  Aligned_cols=338  Identities=12%  Similarity=0.087  Sum_probs=212.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFST  152 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a  152 (457)
                      |..++|+..++. .+..+|.+.+++.+.+++...  ...++....|..++.+.+++.+.+..|    .+.+++++++.++
T Consensus        33 ~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~a  111 (409)
T PRK07590         33 EAKIIRLGIGDV-TQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCD  111 (409)
T ss_pred             CCceEEecCcCC-CCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHH
Confidence            556889988754 344568889999988876321  111121223444444444444333223    2234444444567


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe-----------EEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK-----------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +... ..++.+||.|++..++|..+...++..|.+           +..++.+.-+.+..-+.+          .++++|
T Consensus       112 l~~l-~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~----------~~~k~i  180 (409)
T PRK07590        112 TGNI-LDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE----------EKVDII  180 (409)
T ss_pred             HHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc----------cCceEE
Confidence            6654 456689999999999999988888888875           666654211111111111          245677


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---  294 (457)
                      ++.+++||||.+.+   +++|.++|++||++||+||+|+...+... . ......++. .+..|+++||||++|.+|   
T Consensus       181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~-~-~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRi  258 (409)
T PRK07590        181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS-L-PHSIYEIEGARECAIEFRSFSKTAGFTGTRC  258 (409)
T ss_pred             EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC-C-CcchhhCCCcccceEEEecCccccCCcCcee
Confidence            67788999999998   56888889999999999999975443221 1 011111211 123488999999998666   


Q ss_pred             cEEEecHHHHHHH-----------HhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447        295 GFCVGSSYIIEHH-----------RLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       295 G~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      ||+++++++++.+           ........+. +.+.+...++.+++..  .....++++.++++.+.+.+.|++   
T Consensus       259 G~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~---  334 (409)
T PRK07590        259 AYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFN-GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLES---  334 (409)
T ss_pred             EEEEcCHHHhhhccccchhhhHHHHHHHHhhccc-CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence            9999999888621           1111111121 2355555555555431  111124567788888999999988   


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                       .++.+..+..+.++|+.++...       ...++++.|++ +||.+.++..+.   ....+++||++.  .++++++++
T Consensus       335 -~~~~~~~~~g~~f~wi~~~~~~-------~~~~~~~~l~~~~gv~v~pg~~f~---~~~~~~iRi~~~--~~~~~l~~~  401 (409)
T PRK07590        335 -AGFEVYGGVNAPYIWVKTPDGM-------SSWDFFDKLLQEANVVGTPGSGFG---PSGEGYFRLSAF--GSRENVLEA  401 (409)
T ss_pred             -cCCceecCCcceEEEEECCCCC-------CHHHHHHHHHHHCCEEEeChhHhC---CCCCCEEEEEcc--CCHHHHHHH
Confidence             4666654456788899887643       34567777775 699998876431   123579999953  479999999


Q ss_pred             HHHHHHH
Q psy15447        441 IETLCKS  447 (457)
Q Consensus       441 ~~~l~~~  447 (457)
                      ++.|.++
T Consensus       402 l~rl~~~  408 (409)
T PRK07590        402 MERIKKA  408 (409)
T ss_pred             HHHHHhh
Confidence            9998765

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.94  E-value=8.1e-24  Score=206.94  Aligned_cols=319  Identities=14%  Similarity=0.132  Sum_probs=219.4

Q ss_pred             eeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         80 IPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      +++||.++. ..+|.+ .++++++++.+.++.|          .+..+...++++++++++|.+.++++++|++|+..++
T Consensus         8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al   77 (363)
T TIGR01437         8 KKVINASGKMTILGVSTVSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQSV   77 (363)
T ss_pred             ceEEECCcEeecCCCCCCCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHH
Confidence            567776653 334444 4688999999887653          1356888999999999999999999999999999999


Q ss_pred             HhhcCCCC---------------EEEEeCcccHHH----HHHHHhcCCeEEEecC---CCHHHHHHHHHhhchhcccCCC
Q psy15447        158 AAYVKRND---------------AVFVDENINFAI----QTGLIASRCKVQYFKH---NNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       158 ~a~~~~gd---------------~v~~~~~~h~~~----~~~~~~~g~~~~~~~~---~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      .+++++||               .|+++.+.+..+    ...+.+.|+++++++.   .|++++++.+.+          
T Consensus        78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~----------  147 (363)
T TIGR01437        78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITE----------  147 (363)
T ss_pred             HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcCh----------
Confidence            99999987               777776443322    3566778888877653   478999988853          


Q ss_pred             CccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc
Q psy15447        216 VTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG  294 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g  294 (457)
                      .+.++++++++.+++|.+.|+++|.++|++||+++|+|++|+...     .... .+     +.|+++.|++|++ |..+
T Consensus       148 ~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~-~~-----g~D~~~~S~~K~l~gp~~  216 (363)
T TIGR01437       148 KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-----QKYY-RL-----GADLVIYSGAKAIEGPTS  216 (363)
T ss_pred             hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-----HHHH-Hc-----CCCEEEEeCCcccCCCce
Confidence            233345467767789999999999999999999999999987311     0000 11     3489999999988 4568


Q ss_pred             cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447        295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT  373 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~  373 (457)
                      |+++++++.++.++....+............++..++++.+.+ ..+..+...++.+++.+.|++   ++|+.+..+...
T Consensus       217 G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~---i~g~~~~~~~~~  293 (363)
T TIGR01437       217 GLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT---LKGVSASIVQDE  293 (363)
T ss_pred             EEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc---CCCeEEEEecCC
Confidence            9999998888776432221100001111223444456665543 334555666677889999988   578776532111


Q ss_pred             -----CeEEEEecC---CcchHHHHHHHHHHHHHHHHcC--eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        374 -----PLKYLYLQK---SDDEVASKKLLQTICDMCIQAG--FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       374 -----~~~~i~~~~---~~~~~~~~~~~~~~~~~l~~~G--i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                           ....+.+..   ..       ...++.+.|.++|  |.+++.       +...+.+|+.+.. .+++|++.++++
T Consensus       294 ~~~~~~~~~v~~~~~~~g~-------~~~~l~~~L~~~~~~I~~r~~-------~~~~~~~~l~~~~-~~~~e~~~~~~~  358 (363)
T TIGR01437       294 AGRDIARAEIRFDESELGM-------TAADVVQALRQGEPAIYTRGY-------KANEGIIEIDPRS-VTGGQLDIIVER  358 (363)
T ss_pred             CCCcCceEEEEEeccCCCC-------CHHHHHHHHhcCCCCEEEeee-------eecCCeEEEEeec-CCHHHHHHHHHH
Confidence                 122233332   22       4568999998877  666542       2335789999875 679999999999


Q ss_pred             HHHH
Q psy15447        444 LCKS  447 (457)
Q Consensus       444 l~~~  447 (457)
                      |+++
T Consensus       359 l~~~  362 (363)
T TIGR01437       359 IREI  362 (363)
T ss_pred             HHHh
Confidence            9875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.94  E-value=2.6e-24  Score=208.60  Aligned_cols=310  Identities=12%  Similarity=0.088  Sum_probs=217.3

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-----CCcEEEecccHH
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-----LEETALYSFGFS  151 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~~~i~~~sG~~  151 (457)
                      ..|+..+|+..|.. .++.+|.+.+++.+.+..-..+.  +.     .....+|++.++++++     .+++++++++.+
T Consensus        16 ~~~~~~i~l~~~~~-~~~~p~~~~~~~~~~~~~~~~~~--Y~-----~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~   87 (335)
T PRK14808         16 TEKRDRTYLALNEN-PFPFPEDLVDEVFRRLNSDTLRI--YY-----DSPDEELIEKILSYLDTDFLSKNNVSVGNGADE   87 (335)
T ss_pred             CCCCceeEecCCCC-CCCCCHHHHHHHHHHhhhhhhhc--CC-----CCChHHHHHHHHHHhCCCCCCcceEEEcCCHHH
Confidence            36789999988754 45557889999888765311110  10     1125678888888877     234455555568


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHH-HHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHL-EELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~l-e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++..++.++    |.|++..++|..+...++..|.++..++..+--.+ +..+            ..++++++.+++|||
T Consensus        88 ~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~------------~~~~~i~i~nP~NPT  151 (335)
T PRK14808         88 IIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV------------GEGDVVFIPNPNNPT  151 (335)
T ss_pred             HHHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHc------------cCCCEEEEeCCCCCC
Confidence            888888877    56888999999999999999999988875321001 0111            124688899999999


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      |.+.+.+++.+++ ++++++|+||+|.... +.   .......- .++ .++++||||++|.+|   ||+++++++++.+
T Consensus       152 G~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~-~~---~~~~~~~~-~~~-vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l  224 (335)
T PRK14808        152 GHVFEREEIERIL-KTGAFVALDEAYYEFH-GE---SYVDLLKK-YEN-LAVIRTFSKAFSLAAQRIGYVVSSEKFIDAY  224 (335)
T ss_pred             CCCcCHHHHHHHH-hcCCEEEEECchhhhc-CC---chHHHHHh-CCC-EEEEEechhhccCcccceEEEEeCHHHHHHH
Confidence            9999999999999 5899999999987421 21   11111111 122 488999999999777   9999999999988


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      ......  +  +.+.+...++.++++..+...+..+.++++.+++.+.|++    .|+.+. ++.++++++.++..    
T Consensus       225 ~~~~~~--~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~g~f~~~~l~~~----  291 (335)
T PRK14808        225 NRVRLP--F--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYRIT-DSRGNFVFIFMEKE----  291 (335)
T ss_pred             HHhcCC--C--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEEC-CCCCeEEEEeCCCc----
Confidence            654422  2  2355555666666653322233456777778888888988    577664 45788888888743    


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                          ...++.+.|.++||.++..          .+++||++.   +.++.++++++|++.
T Consensus       292 ----~~~~~~~~l~~~Gi~V~~~----------~~~~Risi~---~~~~~~~~~~~l~~~  334 (335)
T PRK14808        292 ----EKERLLEHLRAKNIAVRSF----------REGVRITIG---KREENDMILKELEVF  334 (335)
T ss_pred             ----cHHHHHHHHHHCCeEEEEC----------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence                2357889999999999842          258999986   689999999998753

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.94  E-value=1.6e-23  Score=208.65  Aligned_cols=346  Identities=12%  Similarity=0.057  Sum_probs=222.0

Q ss_pred             ECCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEeccc
Q psy15447         77 INGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFG  149 (457)
Q Consensus        77 ~~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG  149 (457)
                      .+|+.+|+|+-+++-   .+...|.+.+++.+.++.-...  .+....|..++.+.+++.+.+..|    .+++++++++
T Consensus        29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~  106 (409)
T PLN00143         29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN--SYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGC  106 (409)
T ss_pred             CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC--CCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecCh
Confidence            367899999877662   2555678889998888752111  111123455555555554444333    2355666666


Q ss_pred             HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ++++..++.+++++||.|++..++|..+...+...|.++..++.       .|+++++++++.           +++.++
T Consensus       107 ~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~~~  175 (409)
T PLN00143        107 KHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE-----------NTIAMV  175 (409)
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc-----------CCEEEE
Confidence            78999999999999999999999998888888888988877653       267888776642           345566


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      +.+++||+|.+.+   +++|.++|++|++++|+||+|....++.  ........+......|+++||||.++.+|   ||
T Consensus       176 ~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~  253 (409)
T PLN00143        176 IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS--KPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW  253 (409)
T ss_pred             EECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC--CCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence            6667999999998   6788899999999999999997654431  11110011111222488999999987665   99


Q ss_pred             EEec--HHH------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447        297 CVGS--SYI------IEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRFL  366 (457)
Q Consensus       297 v~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~  366 (457)
                      ++++  +.+      ++.+........+   .+.+..+++.+.++.  ....++.+++++++.+++.+.|++   +.+..
T Consensus       254 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~~~~  327 (409)
T PLN00143        254 LVTCDPSGLLQICEIADSIKKALNPAPF---PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE---IPCIM  327 (409)
T ss_pred             EEeeCchhhhhhHHHHHHHHHHHhccCC---CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc---CCCCC
Confidence            9883  333      2333222211111   244454555555531  011134567777788888888877   33332


Q ss_pred             Ee-ccCCCCeEEEEecCCcchHHHHHHHHHHHH-HHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        367 VQ-GHRDTPLKYLYLQKSDDEVASKKLLQTICD-MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       367 ~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      +. .+.++.++|+.++......  .....+++. .+.++||.+.++..+     ...+++||+++  .+++++++.++.|
T Consensus       328 ~~~~p~gg~f~w~~l~~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~f-----~~~~~iRi~~~--~~~~~l~~al~rl  398 (409)
T PLN00143        328 CPQKAEGAFFALVKLNLLLLED--IEDDMEFCLKLAKEESLIILPGVTV-----GLKNWLRITFA--VEQSSLEDGLGRL  398 (409)
T ss_pred             CCCCCCeeEEEEEecchhhcCC--CCCHHHHHHHHHHhCCEEEeCcccc-----CCCCeEEEEEc--CCHHHHHHHHHHH
Confidence            22 2345778888875310000  001234554 446789999987643     33679999997  4689999999999


Q ss_pred             HHHHHHhc
Q psy15447        445 CKSHDIAV  452 (457)
Q Consensus       445 ~~~~~~~~  452 (457)
                      +++++...
T Consensus       399 ~~~l~~~~  406 (409)
T PLN00143        399 KSFCGRHA  406 (409)
T ss_pred             HHHHHHhc
Confidence            99887554

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.94  E-value=3e-24  Score=212.38  Aligned_cols=293  Identities=17%  Similarity=0.234  Sum_probs=214.0

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++|++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+..    .+...|.++..++..|++++
T Consensus        63 ~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l  142 (400)
T PRK06234         63 NPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEV  142 (400)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence            45678999999999999999999999999999999999999999999988876554    34678999999999999999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++.+.+           ++++|++|+++||+|.+.|+++|.++|+++  |+++|+||+|+.+.++.   .    .+   .
T Consensus       143 ~~~i~~-----------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~---~----l~---~  201 (400)
T PRK06234        143 RNALKA-----------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR---P----LQ---L  201 (400)
T ss_pred             HHHhcc-----------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC---c----hh---h
Confidence            988853           457999999999999999999999999997  99999999998664431   1    11   2


Q ss_pred             CccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      ++||++.|++|.+++.    ||++++++++++.++.......++..++|..++.++..++.+.   .++++.++++.++.
T Consensus       202 g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~---~r~~~~~~na~~~a  278 (400)
T PRK06234        202 GADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQ---IRMEKHCKNAMKVA  278 (400)
T ss_pred             CCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHH
Confidence            4589999999999753    5999999998888765432334566789998888877765443   47788889999999


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------C
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------L  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~  413 (457)
                      +.|++.+.+..+..++              ...+.++.+.++...      ....+|.+.|.--++....+..      |
T Consensus       279 ~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p  352 (400)
T PRK06234        279 KFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV------EEGKVVMNNVKLATLAVSLGDAETLIQHP  352 (400)
T ss_pred             HHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH------HHHHHHHHhCCcceEeccCCCCCceecCC
Confidence            9998844332222211              012567888876432      1456777777654544433221      1


Q ss_pred             cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ..            .....++.+|+++.+...++=++.+.++|+.
T Consensus       353 ~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~  397 (400)
T PRK06234        353 ASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDL  397 (400)
T ss_pred             ccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence            11            0112256899999876544444555555543

>PLN02672 methionine S-methyltransferase

Probab=99.94  E-value=1.4e-23  Score=223.03  Aligned_cols=344  Identities=12%  Similarity=0.105  Sum_probs=230.5

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccH-HH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGF-ST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~-~a  152 (457)
                      +|..+|++..|.. .+..+|.+++++.+.+.+...       .+|..+...++++.+++..|.+    +.+++++|+ ++
T Consensus       695 ~g~~vI~LsinE~-d~ppPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el  766 (1082)
T PLN02672        695 QESSLIHMDVDES-FLPVPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL  766 (1082)
T ss_pred             CCCCEEEEeCCCC-CCCCCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence            4778999988754 455678999999988765422       2245667889999999988753    246666666 56


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      +..++.+++++||.|++..++|+.+...++..|.++..++..       |++.+++.++..         .+..++++.|
T Consensus       767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~---------~~~~I~L~nP  837 (1082)
T PLN02672        767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV---------KKPWVYISGP  837 (1082)
T ss_pred             HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC---------CCCEEEEECc
Confidence            667889999999999999999999999999999998887643       467788777431         1223444444


Q ss_pred             CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC---ccc---cccC-CCCCCccEEEecCcccccCcc-
Q psy15447        226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH---GVT---EYFG-VSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~---~~~---~~~~-~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      .+||||.+.+   +++|.++|++||+++|+||+|+...+.....   .+.   ..+. ..+....|+++||||.++.+| 
T Consensus       838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGL  917 (1082)
T PLN02672        838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGH  917 (1082)
T ss_pred             CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHH
Confidence            4599999988   6788899999999999999997544432110   010   0111 001123488999999998766 


Q ss_pred             --cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH-----HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447        295 --GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALH-----LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFL  366 (457)
Q Consensus       295 --G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-----~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~  366 (457)
                        ||++++ +++++.+..... .....+.+..+++++++.+.     ..+...+.++.++++.+++.+.|++    .|+.
T Consensus       918 RIGylIap~~eLi~~l~~~~~-~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~----~Gi~  992 (1082)
T PLN02672        918 EFGFLALNDSVLIDAFHSAPG-LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA----CGWD  992 (1082)
T ss_pred             HheeEEeCCHHHHHHHHHhhh-hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCe
Confidence              999986 458887764321 11111112333333333221     1111224566788999999999998    5777


Q ss_pred             EeccCCCCeEEEEecCCc------chHH----HHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        367 VQGHRDTPLKYLYLQKSD------DEVA----SKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       367 ~~~~~~~~~~~i~~~~~~------~~~~----~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      +..+.++.++|+.+..-.      +...    ......+++++|+++ ||.+.++.++     ..++++||++.  .+++
T Consensus       993 v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~F-----G~~g~~RIsfa--~~~e 1065 (1082)
T PLN02672        993 VLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWT-----GIPGYCRFSFA--LEDS 1065 (1082)
T ss_pred             EecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCccc-----CCCCeEEEEec--CCHH
Confidence            765555666666542100      0000    001346799999876 9999987642     33679999997  3889


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        436 DMNSLIETLCKSHDI  450 (457)
Q Consensus       436 di~~~~~~l~~~~~~  450 (457)
                      +++++++.|+++.+.
T Consensus      1066 ~LeeALerL~kf~~~ 1080 (1082)
T PLN02672       1066 EFDRALKAIARFKEL 1080 (1082)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987654

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.94  E-value=2.7e-23  Score=203.31  Aligned_cols=320  Identities=15%  Similarity=0.154  Sum_probs=215.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      ..++||+.+.. .++.++.+.+++.+.+.... .       |... ...+|+++++++++.+  ++++++++++++..++
T Consensus        19 ~~~~~l~~~~~-~~~~p~~~~~a~~~~~~~~~-~-------Y~~~-~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~   88 (354)
T PRK06358         19 NMILDFSANIN-PLGVPESLKQAITENLDKLV-E-------YPDP-DYLELRKRIASFEQLDLENVILGNGATELIFNIV   88 (354)
T ss_pred             cceEEecCCCC-CCCCCHHHHHHHHHHHHhhh-c-------CCCc-cHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH
Confidence            45799987632 22336889998888765421 1       1111 2468999999998754  4555556668888888


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-----H-HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-----M-QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-----~-~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      .++ .+ +.|++..++|..+...++..|.++..++.++     + +++.+.+.           .+++++++.+++||+|
T Consensus        89 ~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~-----------~~~~~v~~~~P~NPtG  155 (354)
T PRK06358         89 KVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIK-----------EEIDLVFLCNPNNPTG  155 (354)
T ss_pred             HHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhc-----------cCCCEEEEeCCCCCCC
Confidence            876 44 5688899999888888888898888776431     2 22222221           2345666667799999


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe-cHHHH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG-SSYII  304 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~  304 (457)
                      .+.+   +.+|.++|++||+++|+||+|....+...........  +..+..|+++||||.+|.+|   ||+++ ++.++
T Consensus       156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~  233 (354)
T PRK06358        156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYL--ENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLA  233 (354)
T ss_pred             CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhc--cCCCCEEEEEechhhccCcchhheeeecCCHHHH
Confidence            9998   6788888999999999999997544432111111111  12223488999999998665   99987 46777


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD  384 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~  384 (457)
                      +.+......  +  +.+.+...++.++++.-+...+.++.++++.+.+.+.|++   .+++.+. ++.++++++.+++. 
T Consensus       234 ~~~~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~g~f~~~~~~~~-  304 (354)
T PRK06358        234 EKLLQMREP--W--SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE---FKGIKVY-KPSVNFIFFKLEKP-  304 (354)
T ss_pred             HHHHHhCCC--C--cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEc-CCcceEEEEEcCch-
Confidence            777654322  2  3355555556555532111134567778888899999987   4566665 44567788776532 


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                               .++++.|.++||.+.++..+.   ....+++|+++.   ++++.++++++|++++
T Consensus       305 ---------~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRls~~---~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        305 ---------IDLRKELLKKGILIRSCSNYR---GLDENYYRVAVK---SREDNKKLLKALEVIL  353 (354)
T ss_pred             ---------HHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence                     378899999999999876421   123478999985   7999999999998765

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.94  E-value=1.1e-23  Score=204.48  Aligned_cols=302  Identities=14%  Similarity=0.135  Sum_probs=206.4

Q ss_pred             eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccH-HHHHH
Q psy15447         80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGF-STSAS  155 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~-~a~~~  155 (457)
                      .+++||++| |+++.+. +.+..   ..+.+|.            .+. .+|++.+++++|..  +.+++++|+ +++..
T Consensus        24 ~~~i~ls~Nenp~~~~~-~~~~~---~~~~~Yp------------~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~   86 (339)
T PRK06959         24 DAWLDLSTGINPHGYPV-PPVPA---DAWRRLP------------EDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRA   86 (339)
T ss_pred             hhhceeccCCCCCCCCC-CCCCH---HHHHhCC------------Cch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHH
Confidence            468999998 5555542 22211   2344431            122 78999999999964  345566555 66654


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      . ..++++|+ |++..++|..+...++..|.++..++.++ +.    +.           ...+++++.+++||||.+.+
T Consensus        87 l-~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-~~----~~-----------~~~~~v~l~nPnNPTG~~~s  148 (339)
T PRK06959         87 L-PALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-DT----LP-----------AALTHLIVVNPNNPTAERLP  148 (339)
T ss_pred             H-HHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-hh----cc-----------ccCCEEEEeCCCCCCCCCCC
Confidence            4 45567887 77788999999999999999998886543 11    11           12246667777899999999


Q ss_pred             hHHHHHH---HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHh
Q psy15447        236 LKDILSL---RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRL  309 (457)
Q Consensus       236 l~~i~~l---~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~  309 (457)
                      .+++.++   |++++.++|+||+|......   ..+....  ..++ -|+++||||.+|.+|   ||+++++++++.+..
T Consensus       149 ~~~l~~l~~~~~~~~~~vI~DEay~~~~~~---~s~~~~~--~~~~-vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~  222 (339)
T PRK06959        149 AARLLRWHAQLAARGGTLIVDEAFADTLPA---ASLAAHT--DRPG-LVVLRSVGKFFGLAGVRAGFVLAAPALLAALRD  222 (339)
T ss_pred             HHHHHHHHHHHHHcCCEEEEECCCccCCCc---ccchhcc--CCCC-EEEEecChhhcCCcchheEEEecCHHHHHHHHH
Confidence            6655554   56789999999998753321   1111111  1223 388999999998777   999999999999876


Q ss_pred             hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      ....+    +.+.++.+++.++++.-....+.+++++++++++.+.|++    .|+.+.  +.+.++++.+.+       
T Consensus       223 ~~~~~----~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~--~~~~f~~~~~~~-------  285 (339)
T PRK06959        223 ALGAW----TVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRA----HGFAVH--ATPLFSWTDDPR-------  285 (339)
T ss_pred             hcCCC----CCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCCcc--CcceEEEEeCCC-------
Confidence            54332    2356666666666643222234678888899999999988    466553  234555665432       


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                         ..++.+.|.++||+++...        ..+++||+++  .+++|+++++++|+++.+.+.
T Consensus       286 ---~~~l~~~l~~~GI~vr~~~--------~~~~lRisi~--~~~~e~~~l~~al~~~~~~~~  335 (339)
T PRK06959        286 ---AAALHAALARRGIWTRYFA--------PPPSVRFGLP--ADEAEWQRLEDALAECVPTLA  335 (339)
T ss_pred             ---HHHHHHHHHhCCeEEEECC--------CCCeEEEECC--CCHHHHHHHHHHHHHHHHHHh
Confidence               3468899999999997532        2368999974  378899999999999887664

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.94  E-value=4e-24  Score=210.83  Aligned_cols=287  Identities=13%  Similarity=0.150  Sum_probs=208.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++|+++|.+.+++++||+.|+..++.+++++||.|+++.+.|+.....+..    .+.++..++..|++++
T Consensus        60 ~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l  139 (386)
T PRK06767         60 NPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADI  139 (386)
T ss_pred             CcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHH
Confidence            455789999999999999999999999999999999999999999999988877655432    3556666667788888


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+++           ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.+..+.   .      +. .++
T Consensus       140 ~~~i~~-----------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---p------l~-~g~  198 (386)
T PRK06767        140 ENKIRP-----------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR---P------LE-LGC  198 (386)
T ss_pred             HHhhCc-----------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC---c------hh-cCC
Confidence            887742           45799999999999999999999999999999999999987544321   1      11 245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |+++.|++|.+++.    ||+++++++.++.+..... ...++.++|+.+++++..++.+   +.++++.++++.++.+.
T Consensus       199 Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~-~~~g~~~~~~~a~l~~~~L~tl---~~r~~~~~~~a~~la~~  274 (386)
T PRK06767        199 DAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMR-KDIGGIMAPFDAWLLLRGLKTL---AVRMDRHCDNAEKIVSF  274 (386)
T ss_pred             cEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHH-HHhCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHHHH
Confidence            89999999999653    6899999887766532211 1234456888777776665544   34678889999999999


Q ss_pred             hhcccccCCeEEec-----------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Ccc---
Q psy15447        356 LSQHKVTQRFLVQG-----------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LDQ---  415 (457)
Q Consensus       356 L~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~---  415 (457)
                      |++   .+++..+.           +..+.++.+.+++..      ....++.+.|...++.++.++.      |..   
T Consensus       275 L~~---~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~  345 (386)
T PRK06767        275 LKN---HDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK------EETQAFINDLHFITIAVSLGDTETLIQHPATMTH  345 (386)
T ss_pred             HHc---CCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH------HHHHHHHHhCCccEEecCCCCcCccccCCCcccc
Confidence            998   45554322           123568888876432      1566788888777776654432      211   


Q ss_pred             -c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        416 -E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       416 -~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                       .        ....++.+|+++.+..    .+.+++-|++++
T Consensus       346 ~~~~~~~~~~~gi~~~l~R~svGlE~----~~dl~~dl~~al  383 (386)
T PRK06767        346 AAIPAELRQEMGIYDNLIRLSVGLES----WEDIVSDLEQAL  383 (386)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHH
Confidence             0        0112568999998754    444444444444

>PRK05839 hypothetical protein; Provisional

Probab=99.94  E-value=1.7e-23  Score=206.31  Aligned_cols=329  Identities=14%  Similarity=0.050  Sum_probs=211.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~  154 (457)
                      |+.++||+.+.+ .+...+.+.+++.+..... .   .+....|..++.+.+++.+++..|.    +.+++++++.+++.
T Consensus        23 ~~~~i~l~~~~p-~~~~~~~~~~a~~~~~~~~-~---~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~   97 (374)
T PRK05839         23 EYKGLDLTIGEP-QFETPKFIQDALKNNAHLL-N---KYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF   97 (374)
T ss_pred             CCCeEEcCCCCC-CCCCCHHHHHHHHHHhhcc-C---CCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence            789999998754 3444577777777665431 1   1222345566777777777776662    23444555557777


Q ss_pred             HHHHhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-----HHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++  ++||.|+++.++|..+...+...|.++..++...     ++..+..+            .+++++++.+++
T Consensus        98 ~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~------------~~~k~v~i~nP~  165 (374)
T PRK05839         98 NFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL------------QEVDLVILNSPN  165 (374)
T ss_pred             HHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhh------------ccccEEEEeCCC
Confidence            7777663  5899999999999999888899999988876531     11111111            134677777999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc---CC-CCCCccEEEecCcccccCcc---cEE
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF---GV-STEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~---~~-~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      ||||.+.+   +++|.++|++||+++|+||+|.....+.....+....   +. ..++ .|+++||||.+|.+|   ||+
T Consensus       166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~i  244 (374)
T PRK05839        166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKN-VLVINSISKRSSAPGLRSGFI  244 (374)
T ss_pred             CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCc-EEEEeccccccCCccceeEEE
Confidence            99999988   6688888999999999999987532221111111110   01 1123 488999999987655   999


Q ss_pred             EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      ++++++++.+........+  ..+.+...++.+++..-+..++.+++++++.+.+.+.|.       +.  .+.++.++|
T Consensus       245 i~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~-------~~--~p~gg~fi~  313 (374)
T PRK05839        245 AGDASILKKYKAYRTYLGC--ASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG-------IT--IPPATFYVW  313 (374)
T ss_pred             ecCHHHHHHHHHHHhhcCC--CCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC-------CC--CCCeeEEEE
Confidence            9999988887644321112  224444444444442111112345666666666665442       22  245677888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +.+++.          .+++++|++ +||.+.++.++.. .....+++||+++  .++++++++++.|+++++
T Consensus       314 ~~~~~~----------~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        314 LPVDND----------EEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALV--YDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             EeCCCh----------HHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence            877532          367888875 8999998754321 0112589999996  379999999999988764

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.93  E-value=3.4e-23  Score=204.24  Aligned_cols=314  Identities=19%  Similarity=0.219  Sum_probs=226.8

Q ss_pred             ChhhHHHHHHHHHhcCCCC-CC-CCCcccChHHHHHHHHHHHhhcCCCc---EEEecccHHHHHHHHHhh---cCCCCEE
Q psy15447         96 NPDIEKCAIDCIDKNGVGS-CG-PRGFYGTNVVHLDLENDIASFMGLEE---TALYSFGFSTSASAIAAY---VKRNDAV  167 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~-~~-~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG~~a~~~ai~a~---~~~gd~v  167 (457)
                      .+.+.+++.+.+.++...+ .+ +.......+...++++.+++++|.+.   ++++++++.++..++..+   .++|+.|
T Consensus        12 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~v   91 (371)
T PF00266_consen   12 PKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEV   91 (371)
T ss_dssp             BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEE
T ss_pred             CHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccccc
Confidence            4679999999987653221 11 11111236677889999999999665   567778888999888888   7899999


Q ss_pred             EEeCcccHHHHHH----HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHH
Q psy15447        168 FVDENINFAIQTG----LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKD  238 (457)
Q Consensus       168 ~~~~~~h~~~~~~----~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~  238 (457)
                      ++....|++....    .+..|.++..++.     .|++++++.+.           +++++|++.++.+.+|.+.|+++
T Consensus        92 l~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~-----------~~~~lv~~~~~~~~tG~~~pi~~  160 (371)
T PF00266_consen   92 LVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALN-----------PDTRLVSISHVENSTGVRNPIEE  160 (371)
T ss_dssp             EEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHH-----------TTESEEEEESBETTTTBBSSHHH
T ss_pred             ccccccccccccccccccccchhhhccccccccchhhhhhhhhhhc-----------cccceEEeecccccccEEeeece
Confidence            9998888886632    2355777766653     37888888885           35679999999999999999999


Q ss_pred             HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcce--
Q psy15447        239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGYC--  315 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~~--  315 (457)
                      |.++|+++|+++++|.++++|...         .+++..++|++++|.+|.+|+.| |+++.+++.++.+++...++.  
T Consensus       161 I~~~~~~~~~~~~vD~~~~~g~~~---------id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~  231 (371)
T PF00266_consen  161 IAKLAHEYGALLVVDAAQSAGCVP---------IDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYL  231 (371)
T ss_dssp             HHHHHHHTTSEEEEE-TTTTTTSS-----------TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTT
T ss_pred             ehhhhhccCCceeEechhcccccc---------ccccccccceeeecccccCCCCchhhheehhhhhhcccccccccccc
Confidence            999999999999999999987652         33444567999999999335555 889999988888854322211  


Q ss_pred             ----------------e-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc----CC
Q psy15447        316 ----------------F-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH----RD  372 (457)
Q Consensus       316 ----------------~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~----~~  372 (457)
                                      | .++.+.....+...+++.+.+.  +...++..++.+++++.|++   ++++.+.++    ..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~---~~~~~~~~~~~~~~~  308 (371)
T PF00266_consen  232 DFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEE---LPGIEVLGPDDEPRR  308 (371)
T ss_dssp             THHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTTEEESSSSCGGBG
T ss_pred             ccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhc---CCceeEeeecccccc
Confidence                            2 2245555566666778877433  45678888999999999988   677777442    33


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      +.++.+.+...        ....+.+.|.++||.++.+..+..   ......+.+|++++..+|++|||++
T Consensus       309 ~~i~~~~~~~~--------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  309 PSIVSFNLPGS--------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             TTEEEEEETTS--------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             cceEEEeecCC--------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence            67888877544        456899999999999988554320   0001137999999999999999985

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.93  E-value=4e-23  Score=206.70  Aligned_cols=351  Identities=12%  Similarity=0.086  Sum_probs=233.0

Q ss_pred             CCeeeEEeecCCc-cCCCCCh---hhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNY-LSFVENP---DIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~-l~~~~~p---~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~  153 (457)
                      .|..++++..+++ .++...+   .+.++..+++.. |..      .|+...-..+|+++++++++.+.++++++|++|+
T Consensus        34 ~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~-g~~------~Y~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~  106 (460)
T PRK13238         34 AGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMR-GDE------AYAGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAE  106 (460)
T ss_pred             cCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHh-CCc------ccCCCCCHHHHHHHHHHHhCCCcEEECCCHHHHH
Confidence            4777888877654 2554322   578888877764 221      1233445688999999999999999999999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCcc
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      ..++.+++++|| |++..+.+.++...+...|.+++.++.               .|+++|++.+.+..       ++++
T Consensus       107 ~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~-------~~~t  178 (460)
T PRK13238        107 QILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG-------AENV  178 (460)
T ss_pred             HHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC-------CCce
Confidence            999999999999 888888777777778888887775542               47889999887532       1467


Q ss_pred             EEEEEecCCCCCC-CCCC---hHHHHHHHHHcCcEEEEEcCcccc-c-ccC------CCCccccccCCCCCCccEEEecC
Q psy15447        219 KFIIVEGVYMNSA-DICP---LKDILSLRSKYQARIFVDESVSFG-T-LGS------TGHGVTEYFGVSTEEVDMIIGSL  286 (457)
Q Consensus       219 ~~vi~e~v~~~~G-~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~-~g~------~g~~~~~~~~~~~~~~Di~~~s~  286 (457)
                      ++|++++++|++| .+.+   +++|+++|++||++||.|+++..+ . +..      .+....+..-..-.-.|+++.|.
T Consensus       179 k~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg  258 (460)
T PRK13238        179 PFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSA  258 (460)
T ss_pred             eEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEec
Confidence            8999999999987 6666   679999999999999999987432 1 111      11111110000001247888888


Q ss_pred             cccc-cCcccEEEec-HHHHHHHHhhC---Ccc-eecCCCcHHHHHHHH-HHHHHHhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        287 EHAL-GSVGGFCVGS-SYIIEHHRLSG---SGY-CFSASLPPFLAVAAN-KALHLLKANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       287 sK~l-g~~gG~v~~~-~~~~~~~~~~~---~~~-~~~~~~~~~~~aaa~-a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      .|.+ +..||+++++ +++++.++...   +++ ++++  ++..+..|+ .+++...+. +..+...++.++|.+.|++ 
T Consensus       259 ~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g--~~~~~~~Ala~~l~e~~~~-~~~~~~~~~~~~l~~~L~~-  334 (460)
T PRK13238        259 KKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGG--LAGRDMEALAVGLYEGMDE-DYLAYRIGQVEYLGEGLEE-  334 (460)
T ss_pred             ccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccC--cHHHHHHHHHhhHHHhhCh-HHHHHHHHHHHHHHHHHHH-
Confidence            8865 4458898888 57887776543   233 2222  333333333 334322122 3445555678999999998 


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHH-cCeeEeccccCcc-c-c------CCCCCeEEEEec
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQ-AGFAITCPSHLDQ-E-A------KKQKPSIRITCN  429 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~-~-~------~~~~~~lRi~~~  429 (457)
                         .|+++..+.+++.+++.+..-... ...+....+++.+|.+ .||.+.+.+.+.. . .      ....+.+|++++
T Consensus       335 ---~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~  411 (460)
T PRK13238        335 ---AGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP  411 (460)
T ss_pred             ---CCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc
Confidence               789888777787777766431000 0000023568888775 5999987653322 1 0      112578999987


Q ss_pred             C-CCCHHHHHHHHHHHHHHHHH
Q psy15447        430 I-SHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~-~~t~edi~~~~~~l~~~~~~  450 (457)
                      - ..|++++|.+.++|+++.+.
T Consensus       412 rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        412 RRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             cccCCHHHHHHHHHHHHHHHHh
Confidence            4 45999999999999988754

>PLN02242 methionine gamma-lyase

Probab=99.93  E-value=9.2e-24  Score=209.21  Aligned_cols=244  Identities=11%  Similarity=0.143  Sum_probs=185.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH-----HhcCCeEEEecCCCHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL-----IASRCKVQYFKHNNMQ  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~-----~~~g~~~~~~~~~d~~  197 (457)
                      ..+...+||+++|+++|.+.+++++||++|+..++.+++++||.|+++.+.|+.+...+     +..|.++..++..|++
T Consensus        74 ~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e  153 (418)
T PLN02242         74 FNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLE  153 (418)
T ss_pred             CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHH
Confidence            46788999999999999999999999999999999999999999999999887765543     3467888888888999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.+++          .++++|++++++||+|.+.++++|+++|++||+++|+||+|+.+.+..     . .+     
T Consensus       154 ~l~~~i~~----------~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~-----~-~~-----  212 (418)
T PLN02242        154 AVKKAVVP----------GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP-----A-RL-----  212 (418)
T ss_pred             HHHHhcCc----------CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH-----H-Hc-----
Confidence            99888743          236899999999999999999999999999999999999987543321     0 11     


Q ss_pred             CccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      +.||++.|++|++++.    ||++++++++++.++.....  ...+..++|..++.....++.+   +.++++.++++.+
T Consensus       213 g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl---~~r~~~~~~~a~~  289 (418)
T PLN02242        213 GADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPHL---SLRMKEHCRRAME  289 (418)
T ss_pred             CCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHH
Confidence            3589999999999643    59999999988887754332  2234445666655554444322   3467888999999


Q ss_pred             HHHHhhcccccCCeEEecc-------------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        352 MHSLLSQHKVTQRFLVQGH-------------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~-------------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      +.+.|+++    ++.+..+                   ..+.++.+.+++..       .+.++++.+.
T Consensus       290 la~~L~~~----~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~-------~~~~f~~~l~  347 (418)
T PLN02242        290 YAKRMKEL----GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEE-------RANRLMRYLQ  347 (418)
T ss_pred             HHHHHHhC----CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHH-------HHHHHHHHhh
Confidence            99999983    3343322                   22457778776432       5567777765

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.93  E-value=6.4e-23  Score=203.67  Aligned_cols=329  Identities=12%  Similarity=0.101  Sum_probs=219.4

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecccHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFGFS  151 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~  151 (457)
                      ..++||+.+++ .+...+.+.+++.+.++........    |+......++++.++++++        .+++++++++++
T Consensus        33 ~~~~~l~~g~p-~~~~~~~v~~a~~~~~~~~~~~~~~----y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~  107 (394)
T PRK06836         33 DNVFDFSLGNP-SVPPPAAVKEALRELAEEEDPGLHG----YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAG  107 (394)
T ss_pred             CCeEEecCcCC-CCCCCHHHHHHHHHHHhcCCcCccc----CCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHH
Confidence            46789977653 3334577888887776542111111    2222233445555555542        345677777778


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      ++..++.+++++||.|++..++|......+...|.++..++.      .|++++++.+..           +++++++.+
T Consensus       108 al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~~~  176 (394)
T PRK06836        108 ALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP-----------KTKAVIINS  176 (394)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc-----------CceEEEEeC
Confidence            999999999999999999999988887777888888887754      257788777742           456777788


Q ss_pred             CCCCCCCCCC---hHHHHHHHHH------cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--
Q psy15447        226 VYMNSADICP---LKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--  294 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--  294 (457)
                      ++||+|.+.|   +++|.++|++      ||+++|+||+|....++.  ......... .+ ..++++||||.+|.+|  
T Consensus       177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~-~~i~~~S~SK~~~~pGlR  252 (394)
T PRK06836        177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG--AEVPYIFKY-YD-NSIVVYSFSKSLSLPGER  252 (394)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC--CCCCChHHc-cC-cEEEEecchhhccCccee
Confidence            9999999998   5677888898      899999999987544432  111111111 12 2589999999998655  


Q ss_pred             -cEEEecHHHHHHHH---hh--CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        295 -GFCVGSSYIIEHHR---LS--GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       295 -G~v~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                       ||+++++.+.+...   ..  ........+.+++...++...+.   + ...++.++++.+.+.+.|++    .|+.+.
T Consensus       253 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~-~~~~~~~~~~r~~l~~~L~~----~g~~~~  324 (394)
T PRK06836        253 IGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---A-TVDVSIYKRNRDLLYDGLTE----LGFECV  324 (394)
T ss_pred             eEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---C-hHHHHHHHHHHHHHHHHHHh----CCCEee
Confidence             99999877643211   10  01111011234444444433332   2 22456777888889999988    477765


Q ss_pred             ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .+.++.++|+.++..        ...++++.|.++||.+.++..+     ...+++||+++  .+++++++.++.|++++
T Consensus       325 ~~~gg~~~~~~~~~~--------~~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~--~~~~~~~~~i~~l~~~l  389 (394)
T PRK06836        325 KPQGAFYLFPKSPEE--------DDVAFCEKAKKHNLLLVPGSGF-----GCPGYFRLSYC--VDTETIERSLPAFEKLA  389 (394)
T ss_pred             cCCceEEEEEeCCCC--------CHHHHHHHHHhCCEEEECchhc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence            455567777766542        2356778888999999887542     22478999997  58999999999999988


Q ss_pred             HHh
Q psy15447        449 DIA  451 (457)
Q Consensus       449 ~~~  451 (457)
                      +.-
T Consensus       390 ~~~  392 (394)
T PRK06836        390 KEY  392 (394)
T ss_pred             HHh
Confidence            653

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.93  E-value=5.1e-24  Score=208.13  Aligned_cols=278  Identities=13%  Similarity=0.116  Sum_probs=197.9

Q ss_pred             HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447        127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH  198 (457)
Q Consensus       127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~  198 (457)
                      ..+|++.+++++|.+  .+++++++++++..++.+++++| |.|++..+.|..+...++..|.++..++.+     |+++
T Consensus        59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~  138 (351)
T PRK01688         59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPA  138 (351)
T ss_pred             hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHH
Confidence            478999999999854  45555566689999999999887 899999999998888888899988877643     5677


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++.+.            ++++|++.+++||||.+.+.+++.++++..  ++++|+||+|.......   ......... 
T Consensus       139 l~~~~~------------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~---s~~~~~~~~-  202 (351)
T PRK01688        139 IADNLD------------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQA---SLAGWLAEY-  202 (351)
T ss_pred             HHHhcc------------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCC---ChHHHHhhC-
Confidence            766541            346777889999999999977777766532  68999999986433111   111111111 


Q ss_pred             CCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNT  351 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~  351 (457)
                      .+ -|++.||||++|.+|   ||+++++++++.+......+    +.+.++.+++.++|+.  .+...+.++.+++++++
T Consensus       203 ~n-~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~----~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~  277 (351)
T PRK01688        203 PH-LVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY----PLSTPVADIAAQALSPQGIAAMRERVAEINANRQW  277 (351)
T ss_pred             CC-EEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC----CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            22 488999999998776   99999999998887654333    2344555555555542  11112345667778889


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS  431 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~  431 (457)
                      +.+.|++   +.++....++.++++++.+.+          ..++.+.|+++||.++....+    +...+++||++.  
T Consensus       278 l~~~L~~---~~~~~~~~ps~~nfi~~~~~~----------~~~l~~~L~~~gi~vr~~~~~----~~~~~~iRis~~--  338 (351)
T PRK01688        278 LIAALKE---IPCVEQVFDSETNYILARFTA----------SSAVFKSLWDQGIILRDQNKQ----PGLSNCLRITIG--  338 (351)
T ss_pred             HHHHHHh---CCCCCeECCCCCcEEEEEcCC----------HHHHHHHHHHCCeEEEECCCc----CCCCCeEEEeCC--
Confidence            9999987   446543346678888877642          247889999999999865321    223579999986  


Q ss_pred             CCHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLC  445 (457)
Q Consensus       432 ~t~edi~~~~~~l~  445 (457)
                       +++|+++++++|+
T Consensus       339 -~~~e~~~l~~al~  351 (351)
T PRK01688        339 -TREECQRVIDALR  351 (351)
T ss_pred             -CHHHHHHHHHhhC
Confidence             7899999999873

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.93  E-value=5e-23  Score=202.92  Aligned_cols=296  Identities=17%  Similarity=0.197  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHhhcCCC---c-EEEecccHHHHHHHHHhhcCCCCEEEEeCc-ccHHH-HHHHHhcCCeEEEecC----
Q psy15447        124 NVVHLDLENDIASFMGLE---E-TALYSFGFSTSASAIAAYVKRNDAVFVDEN-INFAI-QTGLIASRCKVQYFKH----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~-~h~~~-~~~~~~~g~~~~~~~~----  193 (457)
                      .+...++++.+++++|.+   . ++++++|+.++..++.++..++|.|++... +++.. ...+...|.++..++.    
T Consensus        36 ~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~  115 (368)
T PRK13479         36 NALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGEDE  115 (368)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCCC
Confidence            357889999999999964   2 456779999999999999888887666444 44433 3556677877776653    


Q ss_pred             -CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccccc
Q psy15447        194 -NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       194 -~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                       .|++++++.+++.         ++.++|.+.++.+++|.+.|+++|.++|+++|+++|+|+++++|...         .
T Consensus       116 ~~d~~~l~~~l~~~---------~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~---------~  177 (368)
T PRK13479        116 PPDAAEVEAALAAD---------PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIP---------I  177 (368)
T ss_pred             CCCHHHHHHHHHhC---------CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcc---------c
Confidence             3688888887642         24467778889999999999999999999999999999988775321         1


Q ss_pred             CCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhCCccee---------------cCCCcHHHHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSGSGYCF---------------SASLPPFLAVAANKALHLL  335 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~aaa~a~l~~~  335 (457)
                      ++...++|++++|++|++ |+.| ||++.++++++.+.....++.+               ..+.+....++..++++.+
T Consensus       178 ~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l  257 (368)
T PRK13479        178 DIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLEL  257 (368)
T ss_pred             cccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHH
Confidence            222235689999999987 5566 9999999888776543222110               0133555555666677765


Q ss_pred             hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447        336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC  409 (457)
Q Consensus       336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~  409 (457)
                      .+.   ++..++++++.+++++.|++    .|+.+..++  ..+. ..+.+......     ...++.++|.++||.+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L~~~gi~v~~  328 (368)
T PRK13479        258 EEEGGVPARGARYANNQRTLVAGMRA----LGFEPLLDAEIQSPIIVTFHAPADPAY-----DFKEFYERLKEQGFVIYP  328 (368)
T ss_pred             HHhhCHHHHHHHHHHHHHHHHHHHHH----cCCcccCCchhcCceEEEEECCCCCCc-----CHHHHHHHHHHCCEEEec
Confidence            332   45678889999999999988    466654221  2332 33443332100     345789999999999976


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +..      ...+.+|++....+|++|+++++++|+++++++.
T Consensus       329 g~~------~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~  365 (368)
T PRK13479        329 GKL------TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG  365 (368)
T ss_pred             CCC------CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            542      1246899998667899999999999999987653

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.93  E-value=4.6e-23  Score=204.73  Aligned_cols=298  Identities=14%  Similarity=0.106  Sum_probs=218.3

Q ss_pred             ChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecCC---
Q psy15447        123 TNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKHN---  194 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~~---  194 (457)
                      ..+...++++.+++++|.+   .+++.++|++++..++..+.++||.|++..+.|.+..  ..++..|.++..++.+   
T Consensus        40 ~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~  119 (401)
T PLN02409         40 FPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWGQ  119 (401)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCCC
Confidence            3677888999999999864   3577778889999999889999999999887776542  4456668887776543   


Q ss_pred             --CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH--HHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        195 --NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL--RSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       195 --d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l--~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                        |++++++.+++..       .+++++|++.++.+++|.+.|+++|.++  |+++|+++|+|+++++|...        
T Consensus       120 ~~~~~~l~~~l~~~~-------~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~--------  184 (401)
T PLN02409        120 GADLDILKSKLRQDT-------NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALD--------  184 (401)
T ss_pred             CCCHHHHHHHHhhCc-------CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcc--------
Confidence              6888888886421       0246788888899999999999999999  99999999999999865431        


Q ss_pred             ccCCCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCC-cce--------------e-cCCCcHHHHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGS-GYC--------------F-SASLPPFLAVAANKAL  332 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~-~~~--------------~-~~~~~~~~~aaa~a~l  332 (457)
                       .++...++|+++.|.+|++++ .| |+++.++++++.+..... ++.              + ..+.+.....+..+++
T Consensus       185 -id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al  263 (401)
T PLN02409        185 -FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAAL  263 (401)
T ss_pred             -ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHH
Confidence             222223568999999999954 44 889999888877653211 110              1 1133445556667788


Q ss_pred             HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C--C-CeEEEEecCCcchHHHHHHHHHHHHHHH-HcCe
Q psy15447        333 HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D--T-PLKYLYLQKSDDEVASKKLLQTICDMCI-QAGF  405 (457)
Q Consensus       333 ~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~--~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi  405 (457)
                      +++.+.  +.+.++.+++.+++++.|++    .|+++..+. .  + .+.++.++...       ...++.+.|. ++||
T Consensus       264 ~~~~~~G~e~i~~~~~~l~~~l~~~L~~----~g~~~~~~~~~~~s~~v~~~~~p~~~-------~~~~l~~~l~~~~~i  332 (401)
T PLN02409        264 DLIFEEGLENVIARHARLGEATRLAVEA----WGLKLCTKKPEWRSDTVTAVVVPEGI-------DSAEIVKNAWKKYNL  332 (401)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCChhhcccceEEEeCCCCC-------CHHHHHHHHHHhCCE
Confidence            876543  45778899999999999988    577765432 1  3 23445555443       3456777776 4599


Q ss_pred             eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+..+..+     ..+..+||+....+|++|+..++++|++++..+.
T Consensus       333 ~i~~G~~~-----~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g  374 (401)
T PLN02409        333 SLGLGLNK-----VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG  374 (401)
T ss_pred             EEEcCCCc-----ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            98876532     2357899999999999999999999999988765

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.93  E-value=2.2e-23  Score=204.51  Aligned_cols=284  Identities=13%  Similarity=0.103  Sum_probs=200.7

Q ss_pred             HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC--------C
Q psy15447        127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN--------N  195 (457)
Q Consensus       127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d  195 (457)
                      ..+|++.+|+++|.+  ++++++++++++..++.+++.+| |.|++..++|..+....+..|.++..++..        |
T Consensus        61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d  140 (364)
T PRK04781         61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD  140 (364)
T ss_pred             HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence            478999999999854  34555555689999999999998 789999999887777778889888887642        3


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccC
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      ++++.+.+..          .+++++++.+++||+|.+.+.+++.++++.  +++++|+||+|.......   ......+
T Consensus       141 ~~~l~~~~~~----------~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~---~~~~~~~  207 (364)
T PRK04781        141 VPAIVAAALA----------SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVP---SAVGLLA  207 (364)
T ss_pred             HHHHHHHHhc----------cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCc---chHHHHh
Confidence            4454433322          345677777999999999998888777764  478999999987543221   1111112


Q ss_pred             CCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREK  348 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~  348 (457)
                      .. ++ .|+++||||++|.+|   ||+++++++++.+......+    +.+.+...++.++++.-  ....+.+++++++
T Consensus       208 ~~-~~-vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~  281 (364)
T PRK04781        208 RY-DN-LAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY----PVPTPCAALAEQALSAPALAVTARRVAEVRAE  281 (364)
T ss_pred             hC-CC-EEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence            11 23 488999999998666   99999999999887654332    23555555555555321  1112344567788


Q ss_pred             HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++.+.+.|++   ++++....++.++++++.+++          ..++.+.|.++||.+++....    +...+++||++
T Consensus       282 r~~l~~~L~~---~~~~~~~~p~~g~f~~~~~~~----------~~~~~~~l~~~gI~v~~~~~~----~~~~~~~Ris~  344 (364)
T PRK04781        282 RERLHAALAQ---LPGVRRVYPSQGNFLLVRFDD----------AEAAFQALLAAGVVVRDQRAA----PRLSDALRITL  344 (364)
T ss_pred             HHHHHHHHHh---CCCCCeECCCCCcEEEEEcCC----------HHHHHHHHHHCCeEEeeCCCC----CCCCCeEEEeC
Confidence            8899999987   446533346778888888753          236788899999999886421    22357899999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHH
Q psy15447        429 NISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .   +++++++++++|+++..
T Consensus       345 ~---~~~~~~~l~~al~~~~~  362 (364)
T PRK04781        345 G---TPEQNDRVLAALQRTQA  362 (364)
T ss_pred             C---CHHHHHHHHHHHHHHHh
Confidence            6   79999999999988654

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.93  E-value=2e-23  Score=204.23  Aligned_cols=290  Identities=18%  Similarity=0.202  Sum_probs=208.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      ++....||++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+....-    ....|.++..++..+.+.+
T Consensus        49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l  128 (377)
T TIGR01324        49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDI  128 (377)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence            567889999999999999999999999999999999999999999888777655432    3445777777776665677


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++++|++|++.|++|.+.|+++|.++|++||+++|+|++|+.|...+   .      + ..++
T Consensus       129 ~~~i~-----------~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---p------l-~~ga  187 (377)
T TIGR01324       129 ATLIQ-----------PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---P------L-EHGV  187 (377)
T ss_pred             HHhcC-----------CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---c------c-ccCc
Confidence            77664           356899999999999999999999999999999999999998876532   1      1 1356


Q ss_pred             cEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |++++|++|++|+    .||+++++++.++.++..  ...++..++|..+...+..++.+.   .++++.++++..+.+.
T Consensus       188 Divv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl~---~R~~~~~~~a~~la~~  262 (377)
T TIGR01324       188 DISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTLG---VRLKQHQESSLAIAKW  262 (377)
T ss_pred             eEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHHH
Confidence            8999999999964    368899988877766532  345677789988888887776553   3688889999999999


Q ss_pred             hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------
Q psy15447        356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------  415 (457)
Q Consensus       356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------  415 (457)
                      |++++.+..+..++              ...+.++.+.+++..     .....++.+.|.--++.++.+..-+.      
T Consensus       263 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-----~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~  337 (377)
T TIGR01324       263 LSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-----QKQVHAFLDHLQLFGLGYSWGGYESLALCNQP  337 (377)
T ss_pred             HHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-----HHHHHHHHHhCCcceEeccCCCccceeecCCC
Confidence            98854332222211              123668888886421     11456788877655554433221100      


Q ss_pred             --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                              .....++.+|+++.+..    .+.+++-|++++
T Consensus       338 ~~~~~~~~~~~~~~~liR~svGlE~----~~dl~~dl~~al  374 (377)
T TIGR01324       338 ELGHRPNIKRNLEGPLIRVHIGLEN----VDDLKADLKAGF  374 (377)
T ss_pred             CCCHHHHHhccCCCCEEEEEeCCCC----HHHHHHHHHHHH
Confidence                    00112368999998754    444444444444

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.93  E-value=3.9e-23  Score=202.56  Aligned_cols=288  Identities=17%  Similarity=0.187  Sum_probs=210.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------C
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------N  195 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d  195 (457)
                      ..+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.++...+...|.++..++.+      |
T Consensus        16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d   95 (352)
T cd00616          16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNID   95 (352)
T ss_pred             CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcC
Confidence            35678999999999999999999999999999999988 5899999999999999998888889888876532      6


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      ++++++.++           +++++|++.+   ++|.+.|+++|+++|++||+++|+|++|++|.... +.    ..+. 
T Consensus        96 ~~~l~~~i~-----------~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~-~~----~~~~-  155 (352)
T cd00616          96 PELIEAAIT-----------PRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK-GR----KVGT-  155 (352)
T ss_pred             HHHHHHhcC-----------cCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC-CE----Eccc-
Confidence            778877663           2446666654   57889999999999999999999999999775421 11    1111 


Q ss_pred             CCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhh---CCc----------ceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447        276 TEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLS---GSG----------YCFSASLPPFLAVAANKALHLLKAN  338 (457)
Q Consensus       276 ~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~---~~~----------~~~~~~~~~~~~aaa~a~l~~~~~~  338 (457)
                        ..|+.+.|++  |+++ +.||+++.+ +++.+.++..   +..          ..+...++++.++.++..++.+   
T Consensus       156 --~~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~---  230 (352)
T cd00616         156 --FGDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL---  230 (352)
T ss_pred             --CcceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh---
Confidence              1266777876  9995 456777665 5666655421   110          1123346777777777666554   


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPS  411 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~  411 (457)
                      ++..++.+++.+++++.|++   ++|+++..+..     .+++.+.+++  ..       ...++.+.|.++||.+....
T Consensus       231 ~~~~~~~~~~~~~~~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~L~~~gI~~~~~~  300 (352)
T cd00616         231 DEIIARRREIAERYKELLAD---LPGIRLPDVPPGVKHSYHLYVIRLDPEAGE-------SRDELIEALKEAGIETRVHY  300 (352)
T ss_pred             HHHHHHHHHHHHHHHHHhcC---CCCccCCCCCCCCceeeEEEEEEECCcCCC-------CHHHHHHHHHHCCCCeeeec
Confidence            34678888999999999988   56777654322     3466666653  22       45689999999999877554


Q ss_pred             cCccccCC------------------CCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        412 HLDQEAKK------------------QKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       412 ~~~~~~~~------------------~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .|....+.                  ....+|++++..+|++||++++++|+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         301 PPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             CccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence            44321110                  02689999999999999999999874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.93  E-value=1e-22  Score=199.93  Aligned_cols=324  Identities=12%  Similarity=0.023  Sum_probs=217.8

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      ..++||+.+.. .+...+.+.+++.+.+... ..+       +... ..+|++.+|++++.+  .+++++++.+++..++
T Consensus        22 ~~~i~l~~~~n-~~~~~~~~~~a~~~~~~~~-~~Y-------~~~~-~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~   91 (360)
T PRK07392         22 DAILDFSASIN-PLGPPESVIAAIQSALSAL-RHY-------PDPD-YRELRLALAQHHQLPPEWILPGNGAAELLTWAG   91 (360)
T ss_pred             ccEEEeCCcCC-CCCCCHHHHHHHHHHHHHh-hcC-------CCcC-HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHH
Confidence            46799987632 2445688999988777642 111       1111 357888999988754  4555556668888888


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      .++. +||.|++..++|..+...++..|.++..++..+       ..++++..+..         .+++++++.+++|||
T Consensus        92 ~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~nP~NPT  161 (360)
T PRK07392         92 RELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL---------TPNDGLLLNNPHNPT  161 (360)
T ss_pred             HHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc---------cCCCEEEEeCCCCCC
Confidence            8765 678999999999999999999999988776431       12344443321         234677888899999


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      |.+.+.++|.++++++++ +|+||+|....+......+....+  .....|+++||||.+|.+|   ||+++++++++.+
T Consensus       162 G~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~--~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~  238 (360)
T PRK07392        162 GKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLA--EYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW  238 (360)
T ss_pred             CCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhh--cCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence            999999999999999985 666999875433211111111111  1222488999999998665   9999999988887


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      ......    .+.+.+...++.+.++.-.-....++.++++.+++.+.|++   ++++.+. ++.+.++++.+..     
T Consensus       239 ~~~~~~----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~---~~~~~~~-~~~~~fl~~~~~~-----  305 (360)
T PRK07392        239 QQWRDP----WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS---LPGLTPL-PSAANFLLVQSQG-----  305 (360)
T ss_pred             HhhCCC----CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCCEEEEEcCC-----
Confidence            643321    23466666666666542111123445677788888888887   4677664 4567777776643     


Q ss_pred             HHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       388 ~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          ...++++.++ ++||.+.++..+.   ....+++||++.   +.++.+++.++++++++
T Consensus       306 ----~~~~l~~~ll~~~gv~v~pg~~f~---~~~~~~iRi~~~---~~~~~~~l~~al~~~~~  358 (360)
T PRK07392        306 ----SALQLQEKLLQQHRILIRDCLSFP---ELGDRYFRVAVR---TEAENQRLLEALAAILA  358 (360)
T ss_pred             ----CHHHHHHHHHhhCCEEEEeCCCCC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHhh
Confidence                2346777764 5699999876431   123579999996   46677788888876653

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.93  E-value=2.7e-23  Score=204.81  Aligned_cols=292  Identities=17%  Similarity=0.208  Sum_probs=207.1

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+||+++|+++|.+.+++++||+.|+..++.+++++||.|+++.+.|+.+...    +...|.++..++.+|++++
T Consensus        58 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l  137 (391)
T TIGR01328        58 NPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEV  137 (391)
T ss_pred             CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence            456789999999999999999999999999999999999999999999888765433    4456888888988889988


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.+           ++++|++|+++||+|.+.|+++|.++|+++|+++|+|++++.+..+.   .    .+   ...
T Consensus       138 ~~~i~~-----------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---~----~~---~g~  196 (391)
T TIGR01328       138 KAHIKD-----------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---P----VA---LGV  196 (391)
T ss_pred             HHhhcc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---c----hh---cCC
Confidence            887742           46799999999999999999999999999999999999998665432   1    11   245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |+++.|++|.+|+.    ||++++++++++.++.......++..++|..++.++..++.+   +.++++..+++.++.+.
T Consensus       197 Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---~~r~~~~~~na~~la~~  273 (391)
T TIGR01328       197 DVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---NIRMKRHSENAMKVAEY  273 (391)
T ss_pred             CEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---HHHHHHHHHHHHHHHHH
Confidence            89999999999753    588999999888877533222345567888888887766544   34678888999999999


Q ss_pred             hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc
Q psy15447        356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ  415 (457)
Q Consensus       356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~  415 (457)
                      |++++.+..+..++              ...+.++.+.++.+.      ....++.+.|.=-.+..+.+      .+|..
T Consensus       274 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~  347 (391)
T TIGR01328       274 LKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGF------AGAKKLLNNLKLIRLAVSLGDAETLIQHPAS  347 (391)
T ss_pred             HHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCH------HHHHHHHHhCCcceEecCCCCCcccCcCCCc
Confidence            98843222111111              012557888886432      13455666554111111111      11111


Q ss_pred             ----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        416 ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       416 ----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          .        ....++.+|+++.+.    |.+.+++-|+++++
T Consensus       348 ~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~  389 (391)
T TIGR01328       348 MTHAVVPKEEREAAGITDGMIRLSVGLE----DADDLIADLKQALD  389 (391)
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence                0        011256899999864    45555666655554

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.93  E-value=3.8e-23  Score=202.42  Aligned_cols=276  Identities=15%  Similarity=0.129  Sum_probs=195.2

Q ss_pred             HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447        127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH  198 (457)
Q Consensus       127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~  198 (457)
                      ..+|++.+|+++|.+  .+++++++++++..++.+++++| |.|++..+.|..+...++..|.++..++.+     |++.
T Consensus        62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~  141 (354)
T PRK04635         62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDY  141 (354)
T ss_pred             HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHH
Confidence            478899999999854  44555566689999999999998 899999999988777778889988887653     3444


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc-CcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY-QARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~-g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++. +            +++++|++++++||||.+.+.+++.++++.. ++++|+||+|.......   ......... +
T Consensus       142 l~~-~------------~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~---s~~~~~~~~-~  204 (354)
T PRK04635        142 IEQ-L------------DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEY---SVADLLASY-P  204 (354)
T ss_pred             HHh-c------------cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCc---chHHHHhhC-C
Confidence            431 1            2456777889999999999999999998864 79999999986432111   111111111 2


Q ss_pred             CccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTM  352 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l  352 (457)
                      + -++++||||++|.+|   ||+++++++++.+......+    +.+.....++.+++..  .+...+.++.++++++++
T Consensus       205 ~-~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l  279 (354)
T PRK04635        205 N-LVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPY----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARL  279 (354)
T ss_pred             C-EEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            3 378999999998766   99999999998876433222    2344444555555532  111123456677788899


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      .+.|++   ..++.+. ++.+.++++.+.+          ..++.+.|.++||.++....     +..++++||+++   
T Consensus       280 ~~~L~~---~~~~~~~-~~~g~f~~~~~~~----------~~~~~~~l~~~gv~v~~~~~-----~~~~~~lRis~~---  337 (354)
T PRK04635        280 QAALSM---YGGAKVL-EGNGNYVLAKFDD----------VDAVFKALWDAGIVARAYKD-----PRLANCIRFSFS---  337 (354)
T ss_pred             HHHHHh---CCCceEC-CCCCcEEEEECCC----------HHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEeC---
Confidence            999988   3446654 4567777776652          23577888899999975432     223578999985   


Q ss_pred             CHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCK  446 (457)
Q Consensus       433 t~edi~~~~~~l~~  446 (457)
                      +++|+++++++|++
T Consensus       338 ~~e~~~~l~~al~~  351 (354)
T PRK04635        338 NRAETDKLIGLIRN  351 (354)
T ss_pred             CHHHHHHHHHHHHH
Confidence            79999999999975

>PRK05968 hypothetical protein; Provisional

Probab=99.93  E-value=1.6e-23  Score=206.47  Aligned_cols=289  Identities=17%  Similarity=0.195  Sum_probs=214.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+||+++|++.|.+.+++++||+.|+..++.+++++||.|++....|+.+.    ..+...|.++..++.+|+++
T Consensus        61 ~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~  140 (389)
T PRK05968         61 DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEA  140 (389)
T ss_pred             CChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHH
Confidence            45668999999999999999999999999999999999999999999988887754    34556788999998889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+.            ++++|++|++.|+.+.+.++++|.++|++||+++|+|++++.+....   .      +. .+
T Consensus       141 l~~~i~------------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p------~~-~g  198 (389)
T PRK05968        141 VAKALP------------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---P------IT-LG  198 (389)
T ss_pred             HHHhcc------------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---c------hh-cC
Confidence            988762            24688899999999999999999999999999999999987654321   1      11 24


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +|+++.|++|.+++    .||++++++++++.++.....+ .+..++|+.++.++..|+.+   +.++++-.++++++.+
T Consensus       199 ~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---~~r~~~~~~~a~~la~  274 (389)
T PRK05968        199 VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---PLRMKAHEASALEIAR  274 (389)
T ss_pred             CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---HHHHHHHHHHHHHHHH
Confidence            58999999999975    3688899998888776432222 33457888888887777655   3467778888999999


Q ss_pred             HhhcccccCCeEEeccC------------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-------
Q psy15447        355 LLSQHKVTQRFLVQGHR------------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-------  415 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-------  415 (457)
                      .|++   .+++..+..+            .+.++.+.+++..       ...++++.|...++.++.+...+.       
T Consensus       275 ~L~~---~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~-------~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~  344 (389)
T PRK05968        275 RLKA---HPVVERVCHPALANHPPAGLSGTSGLFSFIFREGI-------DVRAFADALKLFRLGVSWGGHESLVVPAEVV  344 (389)
T ss_pred             HHHh---CCCccEEECCCCCCChHHhCCCCceEEEEEECCHH-------HHHHHHHhCCccEEecCCCCCCceeeeCccc
Confidence            9988   4555333211            2447778776432       556888888776766655444330       


Q ss_pred             -----------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        416 -----------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       416 -----------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                                 .....++.+|+++.+..+++=++.+-.+|+++
T Consensus       345 ~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~  387 (389)
T PRK05968        345 LQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA  387 (389)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence                       01112578999999876665556666665543

>PRK07908 hypothetical protein; Provisional

Probab=99.93  E-value=5.7e-23  Score=200.88  Aligned_cols=317  Identities=12%  Similarity=0.102  Sum_probs=214.9

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      ++.++||+.|.. .+...+.+.+++.+.+..... +       ....-..++++.++++++.+  +.++++++++++..+
T Consensus        21 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-Y-------~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~   91 (349)
T PRK07908         21 GPGLLDFAVNVR-HDTPPEWLRERLAARLGDLAA-Y-------PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALL   91 (349)
T ss_pred             CCCeEEecCCCC-CCCCCHHHHHHHHHHhhHhhc-C-------CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHH
Confidence            578999998753 344467899999888765321 1       11223467888888888744  445555666888877


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH--HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ--HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~--~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      +.  +++++. ++..+++......++..|.++..++..+.-  +++ .+.           .+++++++.+++||||.+.
T Consensus        92 ~~--l~~~~v-iv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~-~l~-----------~~~~~i~l~np~NPTG~~~  156 (349)
T PRK07908         92 AR--LRPRRA-AVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPA-AVP-----------DDADLVVIGNPTNPTSVLH  156 (349)
T ss_pred             Hh--cCCCeE-EEeCCCChHHHHHHHHcCCEEEeeccCcccCcChh-Hhc-----------cCCCEEEEcCCCCCCCCCc
Confidence            76  466654 456788887778888889998887653200  111 121           2346888888999999999


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhC
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSG  311 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~  311 (457)
                      |.++|.++|++ +.++|+||+|+....+.. ..+..   ..+++ .++++||||.+|.+|   ||+++++++++.+....
T Consensus       157 ~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~-~~l~~---~~~~~-~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~  230 (349)
T PRK07908        157 PAEQLLALRRP-GRILVVDEAFADAVPGEP-ESLAG---DDLPG-VLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGR  230 (349)
T ss_pred             CHHHHHHHHhc-CCEEEEECcchhhccCCc-ccccc---ccCCC-EEEEeecccccCCccceeeeeecCHHHHHHHHhcC
Confidence            99999999975 778889999875332221 11111   12223 488899999998655   99999999998887543


Q ss_pred             CcceecCCCcHHHHHHHHHHHH--HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        312 SGYCFSASLPPFLAVAANKALH--LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       312 ~~~~~~~~~~~~~~aaa~a~l~--~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      ..+    +.++...+++.+.++  ..+..++.+++++++.+++.+.|++    .++++..++.+.++++.+++.      
T Consensus       231 ~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p~~g~~~~~~~~~~------  296 (349)
T PRK07908        231 AHW----PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA----VGARVVDPAAAPFVLVRVPDA------  296 (349)
T ss_pred             CCC----CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh----CCcEeccCCCceEEEEECCcH------
Confidence            322    223444343333332  1111234667788888999999988    377776557788888877642      


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          ..+.+.|.++||.+.++..+.   ....+++||++.   +++|+++++++|++++.
T Consensus       297 ----~~~~~~l~~~gI~v~~g~~f~---~~~~~~vRis~~---~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        297 ----ELLRKRLRERGIAVRRGDTFP---GLDPDYLRLAVR---PRAEVPVLVQALAEILK  346 (349)
T ss_pred             ----HHHHHHHHhCCEEEEECCCCC---CCCCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence                367788889999998875421   113579999994   78999999999998764

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.93  E-value=5.5e-23  Score=199.19  Aligned_cols=274  Identities=15%  Similarity=0.119  Sum_probs=192.3

Q ss_pred             HHHHHHHHHhhcCCC-cEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHH
Q psy15447        127 HLDLENDIASFMGLE-ETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLR  204 (457)
Q Consensus       127 ~~~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~  204 (457)
                      ..++++.+++++|.+ ..+++++|+ +++..+. .++.+| .|++..++|..+...+...|.++..++  |++++++.++
T Consensus        49 ~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~-~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~  124 (330)
T TIGR01140        49 YDELRAAAAAYYGLPAASVLPVNGAQEAIYLLP-RLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALE  124 (330)
T ss_pred             HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHH-HHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhcc
Confidence            488999999999964 456666666 5555544 445677 477778888888888888899988887  8888887763


Q ss_pred             hhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447        205 QQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM  281 (457)
Q Consensus       205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di  281 (457)
                      +            +++++++.++||+|.+.+   +++|+++|++||+++|+||+|+.....   ..+....+  ..+.+|
T Consensus       125 ~------------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~~~~~~~~--~~~~~i  187 (330)
T TIGR01140       125 E------------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---ASLAPQAA--RFPGLV  187 (330)
T ss_pred             c------------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---cchhhHhc--cCCCEE
Confidence            2            236666777999999999   667888899999999999998754332   11222111  123369


Q ss_pred             EEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        282 IIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       282 ~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                      +++|+||++|.+|   ||+++++++++.+......  +  +.+++..+++.+.++.-.-....+++++++.+++.+.|++
T Consensus       188 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~  263 (330)
T TIGR01140       188 VLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--W--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLAR  263 (330)
T ss_pred             EEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--C--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999998766   9999999998888754432  2  2355555555555542111134578888899999999988


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                         ...+.+. ++.+.++|+.+.+          ..+++++|+++||.+.++..+.   ....+++|++++.  ..++ +
T Consensus       264 ---~~~~~~~-~~~~~f~~~~~~~----------~~~l~~~l~~~gi~v~pg~~f~---~~~~~~iRi~~~~--~~~~-~  323 (330)
T TIGR01140       264 ---LGGLEVV-GGTALFLLVRTPD----------AAALHEALARRGILIRDFDNFP---GLDPRYLRFALPT--DEEN-D  323 (330)
T ss_pred             ---CCCceEC-CCCCeEEEEEcCC----------HHHHHHHHHHCCEEEEECCCCC---CCCCCEEEEEecC--HHHH-H
Confidence               3335553 4456777776543          2478999999999999887531   1234799999863  3344 8


Q ss_pred             HHHHHHH
Q psy15447        439 SLIETLC  445 (457)
Q Consensus       439 ~~~~~l~  445 (457)
                      +++++|+
T Consensus       324 ~~~~~l~  330 (330)
T TIGR01140       324 RLEEALA  330 (330)
T ss_pred             HHHHhhC
Confidence            8877763

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.93  E-value=3.2e-23  Score=204.44  Aligned_cols=212  Identities=17%  Similarity=0.212  Sum_probs=173.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+++..    .+...|.++..++..|+++
T Consensus        62 ~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~  141 (398)
T PRK08249         62 TNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQ  141 (398)
T ss_pred             CChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHH
Confidence            467789999999999999999999999999999999999999999999999987543    2456688888888889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.|+++|.++|++||+++|+|++|+.+....         .+ ..+
T Consensus       142 l~~~i~~-----------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---------~l-~~~  200 (398)
T PRK08249        142 IEAEIAK-----------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN---------PL-ALG  200 (398)
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC---------ch-hhC
Confidence            9888853           45799999999999999999999999999999999999987543221         01 134


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +|+++.|++|.+|+    .||++++++++++.++...  ...+..++|..++.++..++.+.   .++++..+++..+.+
T Consensus       201 ~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~--~~~g~~~s~~~a~l~l~~l~tL~---~R~~~~~~na~~la~  275 (398)
T PRK08249        201 ADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR--EINGATMDPMSAYLILRGMKTLK---LRVRQQQESAMALAK  275 (398)
T ss_pred             CCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhCcchHH---HHHHHHHHHHHHHHH
Confidence            58999999999974    3688899988888776433  23445678988888888877664   366888899999999


Q ss_pred             Hhhccc
Q psy15447        355 LLSQHK  360 (457)
Q Consensus       355 ~L~~~~  360 (457)
                      .|++++
T Consensus       276 ~L~~~p  281 (398)
T PRK08249        276 YLQTHP  281 (398)
T ss_pred             HHHcCC
Confidence            998844

>PRK14012 cysteine desulfurase; Provisional

Probab=99.93  E-value=6.6e-23  Score=204.35  Aligned_cols=334  Identities=15%  Similarity=0.150  Sum_probs=215.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHH---hcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCID---KNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~---~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      -|+|.++..+    .++.+.+++.+.+.   .++....... ......+...++++.+++++|.+  .++++++|++++.
T Consensus         5 iyld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~   80 (404)
T PRK14012          5 IYLDYSATTP----VDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDN   80 (404)
T ss_pred             EEecCcCCCC----CCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHH
Confidence            4666665321    35788899888876   2222111010 00112356778999999999975  3778888889988


Q ss_pred             HHHHhh----cCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        155 SAIAAY----VKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       155 ~ai~a~----~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      .++.++    .++||.|++....|.+.....   ...|.++..++.+     |++++++.+.+           ++++|+
T Consensus        81 ~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~-----------~t~lv~  149 (404)
T PRK14012         81 LAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD-----------DTILVS  149 (404)
T ss_pred             HHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC-----------CCEEEE
Confidence            887765    378999999999998775544   3358787776542     78888888753           457999


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSS  301 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~  301 (457)
                      +.+++|++|.+.|+++|.++|++||+++|+|++|++|...         .++...++|+++.|++|.+|+.| |+++.++
T Consensus       150 ~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~  220 (404)
T PRK14012        150 IMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGALYVRR  220 (404)
T ss_pred             EECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEEEEEec
Confidence            9999999999999999999999999999999999876542         11222346899999999887655 6666655


Q ss_pred             HHHHHHHhhCC------cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C
Q psy15447        302 YIIEHHRLSGS------GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D  372 (457)
Q Consensus       302 ~~~~~~~~~~~------~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~  372 (457)
                      +....+.....      .+. .++.+.....+..++++.++.. .+..++.+++.+++.+.|++   ++++.+.++.  .
T Consensus       221 ~~~~~~~~~~~g~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~---~~~i~~~~~~~~~  296 (404)
T PRK14012        221 KPRVRLEAQMHGGGHERGMR-SGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD---IEEVYLNGDLEQR  296 (404)
T ss_pred             CCCCCCCceecCCCccCCcc-CCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCcccc
Confidence            43222211000      011 1223333334444555554332 34567788889999998887   5666654321  1


Q ss_pred             -CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------c----CCCCCeEEEEecCCCCHHHH
Q psy15447        373 -TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------A----KKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       373 -~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~----~~~~~~lRi~~~~~~t~edi  437 (457)
                       .+...+.+....        ..++...|.  ++.+..+.++...          .    ....+.+|++++..+|++|+
T Consensus       297 ~~~~~~~~~~~~~--------~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv  366 (404)
T PRK14012        297 VPGNLNVSFNYVE--------GESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI  366 (404)
T ss_pred             CCCEEEEEEeCcC--------HHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence             222223222111        124555554  5555544332110          0    01247899999999999999


Q ss_pred             HHHHHHHHHHHHHhc
Q psy15447        438 NSLIETLCKSHDIAV  452 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~  452 (457)
                      |+++++|+++++.++
T Consensus       367 d~~~~~l~~~~~~~~  381 (404)
T PRK14012        367 DYAIELVRKSIGKLR  381 (404)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999887663

>PRK08354 putative aminotransferase; Provisional

Probab=99.93  E-value=1.9e-22  Score=193.72  Aligned_cols=295  Identities=13%  Similarity=0.091  Sum_probs=193.5

Q ss_pred             eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      ..++||+.| +++   ++|.+.+++.+.+.... .   +       +....|++.+++++|. ++++++++++++..++.
T Consensus         8 ~~~i~l~~~~np~---~p~~~~~a~~~~~~~~~-~---y-------p~~~~l~~~ia~~~~~-~I~vt~G~~~al~~~~~   72 (311)
T PRK08354          8 EGLIDFSASVNPY---PPEWLDEMFERAKEISG-R---Y-------TYYEWLEEEFSKLFGE-PIVITAGITEALYLIGI   72 (311)
T ss_pred             cceeEecCCCCCC---CCHHHHHHHHHHHHHhh-c---C-------CChHHHHHHHHHHHCC-CEEECCCHHHHHHHHHH
Confidence            468999987 443   24788888887765421 1   1       1236789999999885 45555566688776664


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---  235 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---  235 (457)
                       +..+||.|++..++|..+...++..|.++..++ .|++.+++.+++            .+++++.+++||+|.+.+   
T Consensus        73 -~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~------------~~~vi~~~P~NPTG~~~~~~~  138 (311)
T PRK08354         73 -LALRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVER------------NSVVFFCNPNNPDGKFYNFKE  138 (311)
T ss_pred             -hhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcC------------CCEEEEecCCCCCCCccCHHH
Confidence             445899999999999999999999999887764 478888776642            235666677899999998   


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~  312 (457)
                      +++|.++|++||+++|+||+|....++.  ..      ..+++ .|+++||||++|.+|   ||+++   ..+.++....
T Consensus       139 l~~l~~~a~~~~~~li~De~y~~f~~~~--~~------~~~~~-vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~  206 (311)
T PRK08354        139 LKPLLDAVEDRNALLILDEAFIDFVKKP--ES------PEGEN-IIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRM  206 (311)
T ss_pred             HHHHHHHhhhcCcEEEEeCcchhccccc--cc------cCCCc-EEEEeccHhhcCCccceeeeeee---hHHHHHHcCC
Confidence            5677888899999999999997544432  11      11223 589999999998766   99888   4455544332


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      .+    +.+....+++.+.++   ..   .++++++.+.+++..+.+   .+... .++.+.++++.+.+          
T Consensus       207 ~~----~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~l---~~~l~-~~~~~~~~~~~~~~----------  262 (311)
T PRK08354        207 PW----SIGSTGYAFLEFLIE---DD---FEHLRKTMPLIWREKERF---EKALY-VKSDANFFIKDVGD----------  262 (311)
T ss_pred             Cc----cCCHHHHHHHHHHHH---hH---HHHHHHHHHHHHHHHHHH---HHhcC-CCCCCcEEEEECCC----------
Confidence            22    223333333333222   11   122233333333332221   01111 13456666554432          


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ..++++.|.++||.++++..+     ..++++||++.   +.++.++++++++++
T Consensus       263 ~~~~~~~l~~~gv~v~~g~~f-----~~~~~iRi~~~---~~~~~~~l~~al~~~  309 (311)
T PRK08354        263 AEKFVEFLKRNGILVRDCTSF-----GLPGYIRFSVR---DREENEKLIRALREW  309 (311)
T ss_pred             HHHHHHHHHHCCeEEEecccC-----CCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence            246888899999999988753     22579999996   678888899988875

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.93  E-value=1e-22  Score=202.79  Aligned_cols=336  Identities=13%  Similarity=0.085  Sum_probs=211.7

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---C--CCcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM---G--LEETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g--~~~~i~~~sG~~a~  153 (457)
                      |..++|+..++. .+...|.+.+++.+.+++......  ...|+...-..+|++.+|+++   +  .+++++++++.+++
T Consensus        32 ~~~~i~l~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~--~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al  108 (402)
T TIGR03542        32 SADIIRLGIGDT-TQPLPASVIEAFHNAVDELASEET--FRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV  108 (402)
T ss_pred             CCCeEEcCCCCC-CCCCCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence            567899988754 334467889999888876321100  001222223355666666643   2  33455555555777


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCC-----------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRC-----------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~-----------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ... ..++.+||.|++..++|..+...++..|.           ++..++..+.+.+...+.+         ..++++|+
T Consensus       109 ~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~i~  178 (402)
T TIGR03542       109 FRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---------EPKIDIIY  178 (402)
T ss_pred             HHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---------cCCceEEE
Confidence            664 45668999999999999988888888888           7776654321111111111         02456777


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---c
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---G  295 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G  295 (457)
                      +.+++||||.+.+   +++|.++|++||+++|+||+|+...++..-.  .....++. .+..|+++||||.+|.+|   |
T Consensus       179 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG  256 (402)
T TIGR03542       179 LCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLP--HSIFEIPGAKECAIEFRSFSKTAGFTGVRLG  256 (402)
T ss_pred             EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCC--cchhhCCCCcccEEEEecCccccCCCCcceE
Confidence            7799999999999   7789999999999999999997544332111  11111211 123488999999998666   9


Q ss_pred             EEEecHHHH--------HHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        296 FCVGSSYII--------EHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       296 ~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      |++++++++        ..+.... ...+. +.+.+...++.+.+..  .....+.++.++++.+.+.+.|++    .++
T Consensus       257 ~~i~~~~l~~~~~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~  330 (402)
T TIGR03542       257 WTVVPKELTYADGHSVIQDWERRQ-CTKFN-GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA----AGF  330 (402)
T ss_pred             EEEecHHHhhcchhhHHHHHHHHh-hhccc-CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh----cCc
Confidence            999998876        2221111 11121 2355554444444421  111123456677888889899988    466


Q ss_pred             EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      .+..+.+++++|+.++...       ...++++.|++ +||.+.++..+.   ....+++||++.  .++++++++++.|
T Consensus       331 ~~~~~~~~~f~~v~l~~~~-------~~~~l~~~l~~~~gv~v~pg~~f~---~~~~~~iRis~~--~~~~~l~~~l~~l  398 (402)
T TIGR03542       331 KVYGGEHAPYLWVKTPEGI-------SSWDFFDFLLYQYHVVGTPGSGFG---PSGEGFVRFSAF--GKRENIVEACERI  398 (402)
T ss_pred             eecCCCceeEEEEECCCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec--CCHHHHHHHHHHH
Confidence            6654446778899887543       34578888774 699999875431   123579999964  3789999999988


Q ss_pred             HHH
Q psy15447        445 CKS  447 (457)
Q Consensus       445 ~~~  447 (457)
                      +++
T Consensus       399 ~~~  401 (402)
T TIGR03542       399 KEA  401 (402)
T ss_pred             Hhh
Confidence            765

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02651 cysteine desulfurase

Probab=99.92  E-value=5e-23  Score=202.40  Aligned_cols=311  Identities=15%  Similarity=0.110  Sum_probs=213.2

Q ss_pred             ChhhHHHHHHHHHhc-CCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhh----cCCCCEE
Q psy15447         96 NPDIEKCAIDCIDKN-GVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAY----VKRNDAV  167 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~-~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~----~~~gd~v  167 (457)
                      ++.+.+++.+.+... +.... .........+..+++++.+++++|.+  .++++++|++++..++.++    .++||.|
T Consensus        12 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~v   91 (364)
T PLN02651         12 DPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHV   91 (364)
T ss_pred             CHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEE
Confidence            578889988887653 22111 01001112456788999999999965  4566777888877776543    4789999


Q ss_pred             EEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        168 FVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       168 ~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      ++....|++.....   ...|.++..++.+     |++++++.+++           +++++++.++++++|.+.|+++|
T Consensus        92 l~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-----------~t~lv~v~~~~n~tG~~~~l~~I  160 (364)
T PLN02651         92 ITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP-----------DTALVSVMAVNNEIGVIQPVEEI  160 (364)
T ss_pred             EEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-----------CcEEEEEECCCCCceecccHHHH
Confidence            99998888765443   3457777766542     67888887743           46789999999999999999999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc-----
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG-----  313 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~-----  313 (457)
                      .++|++||+++++|++|+.|...         +++...++|+++.|.+|++|+.| |+++.+++..+.+.....+     
T Consensus       161 ~~~~~~~g~~~~vD~a~~~g~~~---------~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~  231 (364)
T PLN02651        161 GELCREKKVLFHTDAAQAVGKIP---------VDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQER  231 (364)
T ss_pred             HHHHHHcCCEEEEEcchhhCCcc---------cCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCccC
Confidence            99999999999999999876542         23333457999999999866555 7777776554433221110     


Q ss_pred             ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C---CCeEEEEecCCcchH
Q psy15447        314 YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D---TPLKYLYLQKSDDEV  387 (457)
Q Consensus       314 ~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~---~~~~~i~~~~~~~~~  387 (457)
                      ....++.+...+.+..++++++.+. +...++.+++.+++.+.|++.  ++++++.++.  .   ..++.+.+...    
T Consensus       232 ~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~--~~~~~i~~~~~~~~~~~~i~~~~~~~~----  305 (364)
T PLN02651        232 GRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAK--LGGVRVNGPRDPEKRYPGTLNLSFAYV----  305 (364)
T ss_pred             CccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh--CCCEEEECCCCcccCcCCEEEEEeCCC----
Confidence            0123345666667777888887654 345678888888998888741  3588887641  1   34777766543    


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCcccc----------CC----CCCeEEEEecCCCCHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEA----------KK----QKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~~----~~~~lRi~~~~~~t~edi~  438 (457)
                          ...++.+.|.+  |.++.+.+|....          ..    ..+.+|++++..+|++|||
T Consensus       306 ----~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        306 ----EGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             ----CHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence                34577777754  8887766553310          00    1368999999999999985

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.92  E-value=8.3e-23  Score=206.77  Aligned_cols=312  Identities=10%  Similarity=0.094  Sum_probs=204.9

Q ss_pred             ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447        121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~  193 (457)
                      .|..++..++++.+.+..|      .+++++++++++|+..++.+++++||.|++..++|..+...+. ..|.+++.++.
T Consensus        94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~  173 (496)
T PLN02376         94 HGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPC  173 (496)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeC
Confidence            4555555555555555434      2345566666689999999999999999999999999887777 47888888765


Q ss_pred             C-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 N-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 ~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      .       |++++++.++.....     ..+++++++.+++||+|.+.+   +++|.++|++||++||+||+|+...+..
T Consensus       174 ~~~~~~~~~~~~le~a~~~a~~~-----~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~  248 (496)
T PLN02376        174 SSSDNFKLTVDAADWAYKKAQES-----NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAG  248 (496)
T ss_pred             CCCccCcCCHHHHHHHHHHHHhc-----CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCC
Confidence            2       567777665432110     135567777889999999998   6688889999999999999998655432


Q ss_pred             C-CCcccccc---CC---CCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        264 T-GHGVTEYF---GV---STEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       264 ~-g~~~~~~~---~~---~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      . ...+.+..   +.   .+ +..+++.||||.||.+|   ||+++ ++.+.+.++... .  ++ ..+.+...++.+.+
T Consensus       249 ~~~~si~~l~~~~~~~~~~~-~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-~--~~-~vs~~~Q~a~~~~L  323 (496)
T PLN02376        249 GDFVSVAEVVNDVDISEVNV-DLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-S--FG-LVSSQTQLMLASML  323 (496)
T ss_pred             CCcccHHHhhccccccccCC-CeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHh
Confidence            1 11111111   11   11 12256799999998666   99998 466656554322 1  22 23444444444443


Q ss_pred             HH---Hhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeE
Q psy15447        333 HL---LKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAI  407 (457)
Q Consensus       333 ~~---~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v  407 (457)
                      +.   +++ ..+.+++++++.+.+.+.|++    .|+.+..+..+.++|+.++.............++++.+.++ ||.+
T Consensus       324 ~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v  399 (496)
T PLN02376        324 SDDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNV  399 (496)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEE
Confidence            21   111 123466777888888888887    56666555567888988854210000001234688888775 9999


Q ss_pred             eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .++..+..   ..++++|+++.. .++++++..++.|++++..
T Consensus       400 ~pGs~F~~---~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~  438 (496)
T PLN02376        400 SPGSSFRC---TEPGWFRICFAN-MDDDTLHVALGRIQDFVSK  438 (496)
T ss_pred             eCccccCC---CCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence            98765321   235799999974 5689999999999998864

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.92  E-value=8.3e-23  Score=206.10  Aligned_cols=314  Identities=12%  Similarity=0.071  Sum_probs=205.9

Q ss_pred             ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447        121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~  193 (457)
                      .|..++..++++.+.+.+|      .+++++++++++++..++.+++++||.|++..++|..+...+. ..|.+++.++.
T Consensus        86 ~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~  165 (468)
T PLN02450         86 HGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHC  165 (468)
T ss_pred             CChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEec
Confidence            3444555555555544333      2244555555688999999999999999999999988877777 47888887763


Q ss_pred             C-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 N-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 ~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      .       |++++++.+++....     ..+++++++.+++||+|.+.+   +++|.++|++||+++|+||+|+...+..
T Consensus       166 ~~~~~~~~~~~~le~~~~~~~~~-----~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~  240 (468)
T PLN02450        166 SSSNGFQITESALEEAYQQAQKL-----NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDS  240 (468)
T ss_pred             CCccCCcCCHHHHHHHHHHHHhc-----CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCC
Confidence            2       567888877653210     134567777789999999998   6688888999999999999998544432


Q ss_pred             C-CCcccccc------CCCCCCccEEEecCcccccCcc---cEEEecHH-HHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        264 T-GHGVTEYF------GVSTEEVDMIIGSLEHALGSVG---GFCVGSSY-IIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       264 ~-g~~~~~~~------~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      . ........      +..+.+..++++||||.+|.+|   ||+++++. +++.+.... .  ++ ..+.+...++.+.|
T Consensus       241 ~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~--~~-~~s~~~Q~a~~~~L  316 (468)
T PLN02450        241 PGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-S--FG-LVSSQTQYLLSALL  316 (468)
T ss_pred             CCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh-h--cC-CCCHHHHHHHHHHh
Confidence            1 11111111      1111223488999999998665   99999744 555544332 1  22 23555555555554


Q ss_pred             HHH---h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeE
Q psy15447        333 HLL---K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAI  407 (457)
Q Consensus       333 ~~~---~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v  407 (457)
                      +.-   + ...+.+++++++.+.+.+.|++    .|+.+..+..+.++|+.++...... ......++.+.|++ +||.+
T Consensus       317 ~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~----~gi~~~~~~~g~flwi~l~~~~~~~-~~~~~~~l~~~ll~~~gV~v  391 (468)
T PLN02450        317 SDKKFTKNYLEENQKRLKQRQKKLVSGLEA----AGIKCLKSNAGLFCWVDMRHLLKSN-TFEAEMELWKKIVYEVKLNI  391 (468)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCceEEEEEEchHhcCcC-CchHHHHHHHHHHHhCCEEE
Confidence            321   1 1123567888888899999988    4776654455668888875321100 00122456777765 69999


Q ss_pred             eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .|+..+..   ...+++|++++. .++++++++++.|++++....
T Consensus       392 ~PG~~f~~---~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~  432 (468)
T PLN02450        392 SPGSSCHC---TEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS  432 (468)
T ss_pred             eCccccCC---CCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence            98864321   235799999975 578999999999999887654

>PLN02231 alanine transaminase

Probab=99.92  E-value=5.3e-22  Score=202.08  Aligned_cols=342  Identities=12%  Similarity=0.112  Sum_probs=218.9

Q ss_pred             hhhHHHHHHHHHhc-CCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEEe
Q psy15447         97 PDIEKCAIDCIDKN-GVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFVD  170 (457)
Q Consensus        97 p~i~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~  170 (457)
                      .++++++.+.+... +.....+....|..++.+.+++.+.+..|    .+++++++++++|+..++.+++ .+||.|++.
T Consensus       143 ~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~  222 (534)
T PLN02231        143 ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCP  222 (534)
T ss_pred             HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEe
Confidence            45666666666543 21222233345566666666666655445    2455666667789999999987 479999999


Q ss_pred             CcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHH
Q psy15447        171 ENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDIL  240 (457)
Q Consensus       171 ~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~  240 (457)
                      .+.|..+...+...|.+++.++.       .|+++|++.+++....     ..+++++++.+++||||.+.+   +++|.
T Consensus       223 ~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~-----~~~~k~ivl~nP~NPTG~vls~e~l~~Iv  297 (534)
T PLN02231        223 IPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSK-----GITVRALVVINPGNPTGQVLAEENQRDIV  297 (534)
T ss_pred             CCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhc-----CCCeEEEEEeCCCCCCCcCCCHHHHHHHH
Confidence            99999999999999988877653       2688999888753310     124567667788999999988   67999


Q ss_pred             HHHHHcCcEEEEEcCcccccccCCCC--ccccc---cCCCCCC-ccEEEecCcccc-c---CcccEEEe---cHHHHHHH
Q psy15447        241 SLRSKYQARIFVDESVSFGTLGSTGH--GVTEY---FGVSTEE-VDMIIGSLEHAL-G---SVGGFCVG---SSYIIEHH  307 (457)
Q Consensus       241 ~l~~~~g~~li~DEa~~~g~~g~~g~--~~~~~---~~~~~~~-~Di~~~s~sK~l-g---~~gG~v~~---~~~~~~~~  307 (457)
                      ++|++||++||+||+|....+.....  .+...   .|....+ .-|+++|+||.+ |   .++||+++   ++++++.+
T Consensus       298 ~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l  377 (534)
T PLN02231        298 EFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQI  377 (534)
T ss_pred             HHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHH
Confidence            99999999999999998665521111  11111   1111111 247889999976 4   35599875   67888877


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      ..... ....  .+....+++...++           ++++.+.+++.++++.+.+.+.|++   .+|+.+..+.++.++
T Consensus       378 ~k~~~-~~~~--s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~---~~gi~~~~p~Ggfyl  451 (534)
T PLN02231        378 YKVAS-VNLC--SNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNS---LEGVTCNKAEGAMYL  451 (534)
T ss_pred             HHHHh-hhcC--CChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceecCCCeeeEE
Confidence            65432 1121  23333333333331           1112223567888999999999988   468888755566666


Q ss_pred             EEEecCCcc-hHHHH----HHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDD-EVASK----KLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       377 ~i~~~~~~~-~~~~~----~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      |..+..+.. .+...    .....++.+|++ .||.+.|+..+..  ..+..++|+++.  .+++++++.++.|.++++.
T Consensus       452 w~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~--~~g~~~~Rit~~--~~~e~l~eal~RL~~~~~~  527 (534)
T PLN02231        452 FPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ--VPGTWHFRCTIL--PQEDKIPAIVSRLTEFHKS  527 (534)
T ss_pred             eccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC--CCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence            644432210 00000    012235666664 5999999875421  123457999984  5899999999999998876


Q ss_pred             hcC
Q psy15447        451 AVQ  453 (457)
Q Consensus       451 ~~~  453 (457)
                      +-.
T Consensus       528 ~~~  530 (534)
T PLN02231        528 FMD  530 (534)
T ss_pred             HHH
Confidence            643

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.92  E-value=5.5e-23  Score=204.71  Aligned_cols=336  Identities=11%  Similarity=0.005  Sum_probs=210.2

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcC--CCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE--ecccH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNG--VGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL--YSFGF  150 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~--~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~--~~sG~  150 (457)
                      ++..+|++.+.+....+++...+++.+++.+..  .....+....|..++++++++.+.+..+    .+++++  +.+|+
T Consensus        28 ~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~  107 (404)
T PTZ00376         28 SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGT  107 (404)
T ss_pred             CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcc
Confidence            346788887764334444445555555553311  0111222234554444444444433221    223332  55666


Q ss_pred             HHHHHHH---HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        151 STSASAI---AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       151 ~a~~~ai---~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +|...++   .+++++||.|++..++|..+...++..|.+++.++.   +    |++.+++.+++..        +++++
T Consensus       108 ~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~--------~~~~~  179 (404)
T PTZ00376        108 GALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAP--------NGSVV  179 (404)
T ss_pred             hHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCC--------CCCEE
Confidence            7766655   467899999999999999999999999999988875   2    6888888886532        24568


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-Cc-cccccCCCCCCccEEEecCcccccCcc-
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HG-VTEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~-~~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      +++.+++||||.+.+   +++|.++|++||+++|+||+|....++... .. ....+.-..++ .|+++||||.+|.+| 
T Consensus       180 ~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~-vi~i~SfSK~~~~~Gl  258 (404)
T PTZ00376        180 LLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE-FLVAQSFSKNMGLYGE  258 (404)
T ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc-EEEEEeCCCccccccc
Confidence            888999999999988   668888999999999999998754442100 00 01111101123 488999999998655 


Q ss_pred             --cEE---EecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        295 --GFC---VGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       295 --G~v---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                        ||+   ++++++++.+....   ....++ +.+++...++.+.++.-       +...+.+++++++.+.+.+.|++.
T Consensus       259 RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  337 (404)
T PTZ00376        259 RIGALHIVCANKEEAANVLSQLKLIIRPMYS-SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL  337 (404)
T ss_pred             ccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence              997   57876555442211   111222 23555555555555321       111234567888899999999883


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      ....++.+..+.++.++|+.+.            .+++++|.++ ||++.++           +  |++++. .+.++++
T Consensus       338 ~~~~~~~~~~p~gg~f~~~~~~------------~~~~~~L~~~~~v~v~p~-----------~--Ris~~~-~~~~~~~  391 (404)
T PTZ00376        338 GSPGDWEHIINQIGMFSFTGLT------------KEQVERLIEKYHIYLLDN-----------G--RISVAG-LTSKNVD  391 (404)
T ss_pred             CCCCcccccccCceEEEecCCC------------HHHHHHHHHhCCEeecCC-----------C--eEEEec-cCHHhHH
Confidence            1111244433445566666542            2577788877 9988642           2  999854 7999999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        439 SLIETLCKSHDI  450 (457)
Q Consensus       439 ~~~~~l~~~~~~  450 (457)
                      +++++|++++..
T Consensus       392 ~~~~~l~~~~~~  403 (404)
T PTZ00376        392 YVAEAIHDVVRN  403 (404)
T ss_pred             HHHHHHHHHHhc
Confidence            999999988653

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.92  E-value=4.1e-23  Score=201.82  Aligned_cols=281  Identities=15%  Similarity=0.158  Sum_probs=197.6

Q ss_pred             cChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC------------C--CCEEEEeCcccHHHHHHHHh
Q psy15447        122 GTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK------------R--NDAVFVDENINFAIQTGLIA  183 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~------------~--gd~v~~~~~~h~~~~~~~~~  183 (457)
                      +..+..+++.+.+++++|.+    ..+++++|++|+..++.+++.            +  ++.|+.+..+|.+....+..
T Consensus        35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~  114 (345)
T cd06450          35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAY  114 (345)
T ss_pred             hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHH
Confidence            34566666777777888864    578889999999999887642            2  34788899999998888888


Q ss_pred             cCCeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccc
Q psy15447        184 SRCKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF  258 (457)
Q Consensus       184 ~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~  258 (457)
                      .|.+++.++     ..|++++++.+.+....     ..+++++++..+++++|.+.|+++|.++|++||+++++|++|+.
T Consensus       115 ~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~-----~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~  189 (345)
T cd06450         115 LDVKVRLVPVDEDGRMDPEALEAAIDEDKAE-----GLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG  189 (345)
T ss_pred             HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHC-----CCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH
Confidence            888877765     34799999988653211     12456777788888999999999999999999999999999987


Q ss_pred             ccccCC-CCccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447        259 GTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       259 g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~  335 (457)
                      +.+... ....  ..+.  .++|.++.|++|+++++  .|++..+                     .   .+..++++.+
T Consensus       190 ~~~~~~~~~~~--~~~~--~~~d~~~~s~~K~l~~p~g~g~~~~~---------------------~---~~~~~~l~~l  241 (345)
T cd06450         190 FLLPFPEPRHL--DFGI--ERVDSISVDPHKYGLVPLGCSAVLVR---------------------A---LKLWATLRRF  241 (345)
T ss_pred             HHhhChhhHHH--hcCc--cccCEEEEchhHhhCCCcchHHHHHH---------------------H---HHHHHHHHHH
Confidence            764211 1111  1111  35788888999988543  2444333                     2   2223334433


Q ss_pred             hh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447        336 KA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHL  413 (457)
Q Consensus       336 ~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~  413 (457)
                      ..  .++.+++..++.+++.+.|++   .+++.+..++..+++.+.+.....   ......++.++|.++|+++.+... 
T Consensus       242 ~~~g~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~iv~f~~~~~~~---~~~~~~~i~~~L~~~g~~~~~~~~-  314 (345)
T cd06450         242 GRDGYGEHIDRIVDLAKYLAELIRA---DPGFELLGEPNLSLVCFRLKPSVK---LDELNYDLSDRLNERGGWHVPATT-  314 (345)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceeEEEEEECCcch---hhHHHHHHHHHHHhcCCEEEEeeE-
Confidence            32  245778888999999999988   567777655667888887765200   001456799999999655443221 


Q ss_pred             ccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHH
Q psy15447        414 DQEAKKQKPSIRITCNISH-TEQDMNSLIETLCK  446 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~  446 (457)
                          ...+.++|++++..+ |++|+++++++|++
T Consensus       315 ----~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         315 ----LGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             ----ECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence                113568999998875 99999999999975

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.92  E-value=1.5e-22  Score=199.62  Aligned_cols=211  Identities=17%  Similarity=0.176  Sum_probs=167.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+.+++++||++|+..++.+++++||.|+++...|+++..    .+...|.++..++..|+++
T Consensus        59 ~~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~  138 (390)
T PRK08133         59 TNPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDA  138 (390)
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence            366789999999999999999999999999999999999999999999988877554    3456788999999889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+....   .      + ..+
T Consensus       139 l~~~i~-----------~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---p------l-~~g  197 (390)
T PRK08133        139 WRAAVR-----------PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---P------L-KLG  197 (390)
T ss_pred             HHHhcC-----------cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---c------h-hhC
Confidence            988874           356799999999999999999999999999999999999986554321   1      1 123


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +|+++.|++|.+++.    ||+++++++.++.+....  ...+..++|..++.++..++.+.   .++++..++...+.+
T Consensus       198 ~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~--~~~g~~~~~~~a~~~l~gl~tl~---~R~~~~~~~a~~la~  272 (390)
T PRK08133        198 ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFL--RTAGPTLSPFNAWVFLKGLETLS---LRMEAHSANALALAE  272 (390)
T ss_pred             CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHH--HHhCCCCCHHHHHHHHcccchHH---HHHHHHHHHHHHHHH
Confidence            489999999999753    588888887766554322  12334567877777666655443   366777788999999


Q ss_pred             Hhhcc
Q psy15447        355 LLSQH  359 (457)
Q Consensus       355 ~L~~~  359 (457)
                      .|++.
T Consensus       273 ~L~~~  277 (390)
T PRK08133        273 WLEAH  277 (390)
T ss_pred             HHHhC
Confidence            99884

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.92  E-value=2.1e-22  Score=201.58  Aligned_cols=313  Identities=14%  Similarity=0.120  Sum_probs=208.9

Q ss_pred             ccChHHHHHHHHHHHhhcCC------CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecC
Q psy15447        121 YGTNVVHLDLENDIASFMGL------EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKH  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g~------~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~  193 (457)
                      .|...+..++++.+.+++|.      +++++++++++|+..++.+++++||.|+++.++|+.....+. ..|.+++.++.
T Consensus        95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~  174 (447)
T PLN02607         95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHC  174 (447)
T ss_pred             cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeC
Confidence            35555555556555554441      244555566788998888999999999999999988777666 36777777653


Q ss_pred             -------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 -------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 -------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                             .|++++++++++....     +.+++++++.+++||+|.+.+   +++|.++|++||+.+|+||+|+...++.
T Consensus       175 ~~~~~f~~~~~~le~a~~~a~~~-----~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~  249 (447)
T PLN02607        175 DSSNNFQVTPQALEAAYQEAEAA-----NIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA  249 (447)
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHh-----CCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC
Confidence                   2678888888754321     245677888889999999998   7799999999999999999998665543


Q ss_pred             CC-Cccccc---cCC-C-CCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH
Q psy15447        264 TG-HGVTEY---FGV-S-TEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       264 ~g-~~~~~~---~~~-~-~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~  333 (457)
                      .. ..+.+.   .+. + ++.+ +++.||||.||.+|   |++++ ++.+++.++...   .++ ..+.+...++.+.|+
T Consensus       250 ~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---~~~-~~s~~~q~~~~~~L~  324 (447)
T PLN02607        250 SEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMS---SFT-LVSSQTQHLLASMLS  324 (447)
T ss_pred             CCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHh---hcC-CCCHHHHHHHHHHhC
Confidence            11 111111   111 1 2333 77899999998666   99887 667766665332   122 123333333333332


Q ss_pred             H---Hhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEe
Q psy15447        334 L---LKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAIT  408 (457)
Q Consensus       334 ~---~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~  408 (457)
                      .   .++ ..+.+++++++.+.+.+.|++    .|+++..+..+.++|+.+....... ......++.+++++ +||.+.
T Consensus       325 d~~~~~~~l~~~r~~l~~~~~~~~~~L~~----~gi~~~~~~ag~fvw~~L~~~~~~~-~~~~e~~l~~~ll~~~gV~v~  399 (447)
T PLN02607        325 DEEFTENYIRTNRERLRKRYEMIVQGLRR----AGIECLKGNAGLFCWMNLSPLLETP-TREGELALWDSILREVKLNIS  399 (447)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCCeeEEEEEEchHhhcCC-CchhHHHHHHHHHHhCCEEEc
Confidence            1   111 124567788888889999988    5776655556788888875321000 00123467777775 699999


Q ss_pred             ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++..+.   ...++++|++++. .++++++++++.|.++++.-+
T Consensus       400 pG~~f~---~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~  439 (447)
T PLN02607        400 PGSSCH---CSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK  439 (447)
T ss_pred             CccccC---CCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence            876432   1346899999975 578999999999999887654

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.92  E-value=1.2e-22  Score=200.00  Aligned_cols=245  Identities=16%  Similarity=0.172  Sum_probs=185.0

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++++++|.+.+++++||++|+..++.+++++||.|++....|+....    .+...|.++..++.+|++++
T Consensus        53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l  132 (380)
T TIGR01325        53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAW  132 (380)
T ss_pred             CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHH
Confidence            56689999999999999999999999999999999999999999998888866433    34556888888888889988


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++++|++|+++||+|.+.|+++|.++|+++|+++|+|++++.+....         .+ ..++
T Consensus       133 ~~~i~-----------~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~---------pl-~~g~  191 (380)
T TIGR01325       133 EAAVK-----------PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQ---------PL-KLGA  191 (380)
T ss_pred             HHhcC-----------CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hhCC
Confidence            87764           246799999999999999999999999999999999999987543211         11 1245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |+++.|++|.+++.    ||++++++++++.++....  .++..++|..++.++..++.+..   ++++..+++.++.+.
T Consensus       192 Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~--~~g~~~~p~~a~~~l~~l~tl~~---r~~~~~~~a~~la~~  266 (380)
T TIGR01325       192 DVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLR--HTGPAMSPFNAWVLLKGLETLSL---RMQKQFDSALAIAEW  266 (380)
T ss_pred             CEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHH--hhCCCCCHHHHHHHHhccCcHHH---HHHHHHHHHHHHHHH
Confidence            89999999999753    5889999888877764322  24555688887777777666643   678888899999999


Q ss_pred             hhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        356 LSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       356 L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      |++++.+..+..++              ...+.++.+.+++..       .+.++.+.|.
T Consensus       267 L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~-------~~~~f~~~l~  319 (380)
T TIGR01325       267 LQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRA-------AAWKVLDAVE  319 (380)
T ss_pred             HHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHH-------HHHHHHHcCC
Confidence            98843222222211              012568888887322       4556666654

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.92  E-value=4.8e-22  Score=193.09  Aligned_cols=309  Identities=13%  Similarity=0.141  Sum_probs=208.4

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      .|..++||..|.. .+...|.+.+++.+.+.+....  .++     ..-..+|++.++++++.+  .+++++++++++..
T Consensus        16 ~~~~~i~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~Y~-----~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~   87 (337)
T PRK03967         16 EGNYRIWLDKNEN-PFDLPEELKEEIFEELKRVPFN--RYP-----HITSDPLREAIAEFYGLDAENIAVGNGSDELISY   87 (337)
T ss_pred             CCCceEEecCCCC-CCCCCHHHHHHHHHHhhcCccc--cCC-----CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence            3456789988753 3345688999988887642221  111     112467888899988844  34445555577776


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++.++  +||.|++..+.|..+....+..|.++..++..     |++.+++.+            .+++++++.+++||+
T Consensus        88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~------------~~~~~v~~~~P~NPt  153 (337)
T PRK03967         88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA------------KNASAVFICSPNNPT  153 (337)
T ss_pred             HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc------------cCCCEEEEeCCCCCC
Confidence            66655  69999999999987777778888888777542     456665543            123466677889999


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHH  307 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~  307 (457)
                      |.+.+.++|.++++ +++++|+||+|.... +.   ......... ++ .|+++||||.+|.+|   ||+++++++++.+
T Consensus       154 G~~~~~~~l~~i~~-~~~~ii~De~y~~~~-~~---~~~~~~~~~-~~-vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~  226 (337)
T PRK03967        154 GNLQPEEEILKVLE-TGKPVVLDEAYAEFS-GK---SLIGLIDEY-PN-LILLRTFSKAFGLAGIRAGYAIANEEIIDAL  226 (337)
T ss_pred             CCCCCHHHHHHHHh-cCCEEEEECchhhhc-cc---chHHHHhhC-CC-EEEEecchHhhcchhhhheeeecCHHHHHHH
Confidence            99999999999995 799999999987422 21   111111111 23 488999999998665   9999999999888


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                      +.....  +  +.+.+..+++.+.++..+...+.++.+.++.+.+.+.|.+    ..    .+++++++++.+       
T Consensus       227 ~~~~~~--~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~~~~~~~~~-------  287 (337)
T PRK03967        227 YRIKPP--F--SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE----YA----YPSDANFLLLKL-------  287 (337)
T ss_pred             HhhcCC--C--CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc----Cc----CCCCCcEEEEhH-------
Confidence            764432  2  3356666666656542222223344555666777777766    21    245677776632       


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                             .+.+.|.++||.+++..      ....+++|+++.   +.++.++++++|+++.+.
T Consensus       288 -------~~~~~l~~~gi~v~~~~------~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        288 -------DAYDYLLENGIVVRKLS------GRLEGHIRVTVG---KREENDEFIKALKEIKEG  334 (337)
T ss_pred             -------HHHHHHHHCCEEEEeCC------CCCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence                   26688889999998643      123579999986   688999999999887653

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.92  E-value=7.6e-23  Score=201.07  Aligned_cols=212  Identities=17%  Similarity=0.187  Sum_probs=167.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH---HhcCCeEEEecCCCHHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL---IASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~d~~~l  199 (457)
                      .++...+||+++|+++|.+.+++++||++|+..++.+++++||.|+++.+.|+++...+   ...|.++..+. .|++++
T Consensus        51 ~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l  129 (385)
T PRK08574         51 ENPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDI  129 (385)
T ss_pred             CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHH
Confidence            45678899999999999999999999999999999999999999999999998876655   34466666654 468888


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+++          .++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+....   +      +. .++
T Consensus       130 ~~~i~~----------~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---~------l~-~Ga  189 (385)
T PRK08574        130 IEAIKE----------GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---P------LR-HGA  189 (385)
T ss_pred             HHhcCc----------cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------hh-hCC
Confidence            887743          256788899999999999999999999999999999999997664321   1      11 345


Q ss_pred             cEEEecCcccccC----ccc-EEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS----VGG-FCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~----~gG-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|++++    .|| ++++++++.+.++...  ..++..++|+.++.++..++.+.   .++++..+++.++.+
T Consensus       190 Divv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~--~~~g~~~~p~~a~l~l~~l~tL~---~R~~~~~~na~~la~  264 (385)
T PRK08574        190 DFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR--RRLGTIMQPFEAYLVLRGLKTLE---VRFERQCRNAMAIAE  264 (385)
T ss_pred             cEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH--HhcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHH
Confidence            8999999999964    267 4555777777765432  22566678988888887776654   367778889999999


Q ss_pred             Hhhccc
Q psy15447        355 LLSQHK  360 (457)
Q Consensus       355 ~L~~~~  360 (457)
                      .|++++
T Consensus       265 ~L~~~p  270 (385)
T PRK08574        265 FLSEHP  270 (385)
T ss_pred             HHHcCC
Confidence            998754

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.92  E-value=6.9e-23  Score=189.30  Aligned_cols=326  Identities=16%  Similarity=0.156  Sum_probs=222.4

Q ss_pred             EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447         83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK  162 (457)
Q Consensus        83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~  162 (457)
                      +||.|.++-+  .+|++.+++.++-.       +....||..+...++++++++++|.+.++|+.||+.||..+|.+.++
T Consensus         2 ~~f~SDn~~g--~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~   72 (342)
T COG2008           2 IDFRSDNVAG--PTPEMREALAAANA-------VGDDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQ   72 (342)
T ss_pred             CccccCccCC--CCHHHHHHHHhccc-------cCCCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcC
Confidence            5788876655  47999999876642       12335789999999999999999998899999999999999999999


Q ss_pred             CCCEEEEeCcccHHHHHH--HHhc--CCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        163 RNDAVFVDENINFAIQTG--LIAS--RCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       163 ~gd~v~~~~~~h~~~~~~--~~~~--g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      |++.|++....|......  +...  +.++...+.    .++++++..++..+  . +.  ..+..++.++..+..|.+.
T Consensus        73 ~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d--~-~~--~~~~~~~~e~~~te~GtVy  147 (342)
T COG2008          73 PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDD--I-HH--APTPLAVLENTATEGGTVY  147 (342)
T ss_pred             CCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCC--c-cc--CCCceEEEeeccCCCceec
Confidence            999999999998766532  2222  244444442    27999999887621  1 11  2344555555555889999


Q ss_pred             C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhh
Q psy15447        235 P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLS  310 (457)
Q Consensus       235 ~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~  310 (457)
                      |   |++|.++||+||+.|++|.+.-+-..-..|... ..+   ...+|++..+++|.+|.++ +.++++.+++..++..
T Consensus       148 ~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~-~~~---~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~  223 (342)
T COG2008         148 PLDELEAISAVCKEHGLPLHMDGARLANALVALGVAL-KTI---KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRW  223 (342)
T ss_pred             CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCH-HHH---HhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHH
Confidence            9   568888899999999999985322221111111 111   1456899999999998665 5678899888877543


Q ss_pred             CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH--HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        311 GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK--CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       311 ~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~--~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .+.+....+-.-+.++.++..|   +++-.+.....+|  +.+|.+.|.+   .+|+++..++.++++.+.++...    
T Consensus       224 rK~~Ggl~~k~r~laA~~~~~l---~~~~~~~~~~Han~mA~~La~~~~~---~~G~~~~~~~~tN~vf~~l~~~~----  293 (342)
T COG2008         224 RKRAGGLMRKARFLAAQGLYAL---EDDVWRLAADHANAMAARLAEGLEA---KPGVKLAFPVETNMVFVRLPESA----  293 (342)
T ss_pred             HHHhcccHhhhhHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHhhhh---cCCceeccCCcccEEEEECChHH----
Confidence            3322222222344445454443   3332333333344  8899999986   48999987788999999887642    


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                        ........++...|+++...          ...+||+.+..+|++|++++++.++++.
T Consensus       294 --i~~l~~~~~~~~~~~~~~~~----------~~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         294 --IEALRLAGALFYRGVLIGAH----------GEIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             --HHHHHhhchhheeeeeccCC----------CceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence              01222333344445554322          1479999999999999999999998764

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.92  E-value=1.6e-22  Score=200.18  Aligned_cols=212  Identities=18%  Similarity=0.240  Sum_probs=169.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++.++++.|.+.+++++||+.|+..++.+++++||.|++..+.|+.+..    .+...|.++..++..|++++
T Consensus        64 ~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l  143 (403)
T PRK07503         64 NPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAAL  143 (403)
T ss_pred             CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHH
Confidence            46688999999999999999999999999999999999999999999988866443    34567888988888899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+++           ++++|++|+++||+|.+.|+++|.++|++||+++|+|++|+.+..+.   .    .+   ..+
T Consensus       144 ~~~i~~-----------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~---~----l~---~g~  202 (403)
T PRK07503        144 KAAISD-----------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQR---P----LE---LGA  202 (403)
T ss_pred             HHhcCc-----------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---c----hh---hCC
Confidence            888753           45788899999999999999999999999999999999997653321   1    11   244


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |+++.|++|.+|+.    ||++++++++++.++........+..++|+.++.++..|+.+.   .++++..+++..+.+.
T Consensus       203 Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~---~r~~~~~~na~~~a~~  279 (403)
T PRK07503        203 DLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLA---LRMDRHCASAQAVAEW  279 (403)
T ss_pred             CEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHH
Confidence            89999999999753    6888888888887764322223455679998888877776554   3566777888888888


Q ss_pred             hhcc
Q psy15447        356 LSQH  359 (457)
Q Consensus       356 L~~~  359 (457)
                      |+++
T Consensus       280 L~~~  283 (403)
T PRK07503        280 LARH  283 (403)
T ss_pred             HHhC
Confidence            8874

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.92  E-value=2.3e-22  Score=198.70  Aligned_cols=211  Identities=16%  Similarity=0.171  Sum_probs=167.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++|++.|.+.++++++|+.|+..++.+++++||.|++..+.|+++...+    ...|.++..++..|++++
T Consensus        64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l  143 (398)
T PRK07504         64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNW  143 (398)
T ss_pred             CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHH
Confidence            5667899999999999999999999999999888888999999999998887654432    345888888888899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++++|++|+++||+|.+.|+++|.++|+++|+++|+|++|+.+....   . . .     .++
T Consensus       144 ~~ai~-----------~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~---~-~-~-----~ga  202 (398)
T PRK07504        144 EKAVR-----------PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK---P-L-E-----LGA  202 (398)
T ss_pred             HHhcC-----------cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC---c-h-h-----hCC
Confidence            88874           356899999999999999999999999999999999999998654321   1 1 1     245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHH-HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEH-HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|++++.    ||+++++++.+.. ++...  ...+..++|+.++.++..|+.+..   ++++..+++..+.+
T Consensus       203 Divv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~--~~~g~~~s~~~A~~~l~~L~tl~~---R~~~~~~na~~la~  277 (398)
T PRK07504        203 HIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYF--RHTGPSLSPFNAWTLLKGLETLPV---RVRQQTESAAAIAD  277 (398)
T ss_pred             CEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccchHHH---HHHHHHHHHHHHHH
Confidence            89999999999653    5788888776543 32211  123446799999999888877643   67788899999999


Q ss_pred             Hhhccc
Q psy15447        355 LLSQHK  360 (457)
Q Consensus       355 ~L~~~~  360 (457)
                      .|++++
T Consensus       278 ~L~~~p  283 (398)
T PRK07504        278 FLAGHP  283 (398)
T ss_pred             HHHcCC
Confidence            998843

>PRK06460 hypothetical protein; Provisional

Probab=99.91  E-value=4.9e-22  Score=195.01  Aligned_cols=292  Identities=15%  Similarity=0.176  Sum_probs=200.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCccc----HHHHHHHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENIN----FAIQTGLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h----~~~~~~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++++|++.|.+.++++++|++|+..++.+++++||.|++..+.+    ..+...++..|.++..++.++.+.
T Consensus        43 ~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~  122 (376)
T PRK06460         43 ANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNI  122 (376)
T ss_pred             CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHH
Confidence            4567899999999999998899999999999999999999999999886543    333455677788888888776555


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++++++||+|.+.|+++|.++|++||+++|+||+|+.+...   .      .+. .+
T Consensus       123 l~~~~~-----------~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~---~------~l~-~~  181 (376)
T PRK06460        123 IEKAKS-----------KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ---K------PLE-LG  181 (376)
T ss_pred             HHHhcC-----------CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC---C------hhh-cC
Confidence            544331           35679999999999999999999999999999999999998643211   1      111 23


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      .|+++.|++|++++    .+|++++++++++.++....  .++.+.+|..+..++..++.++   .+++++.++++++.+
T Consensus       182 ~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~--~~g~~~~~~~a~~~l~~~~~l~---~r~~~~~~n~~~l~~  256 (376)
T PRK06460        182 ADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRR--TLGTSLDPHAAYLTLRGIKTLK---IRMDVINRNAEQIAE  256 (376)
T ss_pred             CCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHH
Confidence            58999999999964    36899999998888865432  2444567776666666666554   477889999999999


Q ss_pred             HhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH--cCeeE----eccccCc
Q psy15447        355 LLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ--AGFAI----TCPSHLD  414 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~--~Gi~v----~~~~~~~  414 (457)
                      .|++++.+..+..++              ...+.++.+.++++.      ..+.++.+.|.=  .+.-+    +...+|.
T Consensus       257 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~------~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~  330 (376)
T PRK06460        257 FLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQ------ESALKVMKSLKLIIPAQTLGGVNSVISHPA  330 (376)
T ss_pred             HHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcH------HHHHHHHHhCCcceeccCCCCCceEEeCcc
Confidence            999854332222211              122567888886432      144556665531  11000    0001111


Q ss_pred             c------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        415 Q------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       415 ~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .            .....++.+|+++.+.    |.+.+++-|+++++.
T Consensus       331 ~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~  374 (376)
T PRK06460        331 TMSHRTLSLEERKIVGITDSLLRLSVGIE----DVNDLIEDLDRALST  374 (376)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence            1            0112357899999864    455555555555543

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.91  E-value=5.2e-22  Score=196.18  Aligned_cols=233  Identities=15%  Similarity=0.114  Sum_probs=180.0

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+||++||++.|.+.+++++||+.|+..++.++.++||.|++....|+.++    ..++..|.++..++.+|++++
T Consensus        69 ~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l  148 (403)
T PRK07810         69 NPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQW  148 (403)
T ss_pred             CchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence            4567899999999999999999999999999999999999999999886665443    345667899999999999999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++++++           ++++|++|++.||+|.+.++++|.++|+++|+++|+|++|+.+....   +      + ..++
T Consensus       149 ~~ai~~-----------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---~------~-~~ga  207 (403)
T PRK07810        149 EEALSV-----------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQR---G------L-PLGA  207 (403)
T ss_pred             HHhcCc-----------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCC---h------h-hcCC
Confidence            998853           46799999999999999999999999999999999999998664421   1      1 1245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHH-HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEH-HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|.+++.    ||+++++++.+.. ++...  ...+..++|..++.++..|+.+.   .++++..+++.++.+
T Consensus       208 Divv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~--~~~g~~~s~~~a~l~l~~L~tl~---~R~~~~~~~a~~~a~  282 (403)
T PRK07810        208 DVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM--RHTGPALSAFNAWVLLKGLETLA---LRVRHSNASALRIAE  282 (403)
T ss_pred             cEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHH--HHhCCCCCHHHHHHHHhccCcHH---HHHHHHHHHHHHHHH
Confidence            89999999999642    6889888775542 33211  12344679999898888877664   477888899999999


Q ss_pred             HhhcccccCCeEEecc--------------CCCCeEEEEecC
Q psy15447        355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQK  382 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~  382 (457)
                      .|++++.+..+..++-              ..+.++.+.++.
T Consensus       283 ~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~  324 (403)
T PRK07810        283 FLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA  324 (403)
T ss_pred             HHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence            9988443332322110              235678888864

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.91  E-value=3.9e-22  Score=195.41  Aligned_cols=230  Identities=17%  Similarity=0.179  Sum_probs=175.0

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++...+|++++|++.|.+.+++++||++|+..++ .+.++||.|++..+.|+.+..    .+...|.++..++..|+++
T Consensus        50 ~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~  128 (366)
T PRK08247         50 GNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKA  128 (366)
T ss_pred             CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHH
Confidence            45678999999999999999999999999998766 577899999999888776433    3455788999999889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.++++|.++|++||+++|+||+|+.+....         .+ ..+
T Consensus       129 l~~~i~~-----------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---------p~-~~g  187 (366)
T PRK08247        129 IEQAITP-----------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---------PL-EEG  187 (366)
T ss_pred             HHHhccc-----------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------ch-hcC
Confidence            9888753           45799999999999999999999999999999999999986543321         11 134


Q ss_pred             ccEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      .||+++|++|.+++    .+|+++++ +++.+.++...  ...+..++|+.++.++..++.+.   .++++.+++++.+.
T Consensus       188 ~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~l~tl~---~r~~~~~~~a~~l~  262 (366)
T PRK08247        188 ADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ--NAAGAVLSPFDSWLLIRGMKTLA---LRMRQHEENAKAIA  262 (366)
T ss_pred             CcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHH--HhcCCCCChHHHHHHHhccCcHH---HHHHHHHHHHHHHH
Confidence            58999999999975    46888886 66666654322  12233457777777767665443   35677789999999


Q ss_pred             HHhhcccccCCeEEe-ccCCCCeEEEEecC
Q psy15447        354 SLLSQHKVTQRFLVQ-GHRDTPLKYLYLQK  382 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~  382 (457)
                      +.|++   .+++..+ .++.+.++.+.++.
T Consensus       263 ~~L~~---~p~v~~v~~P~~gg~~sf~~~~  289 (366)
T PRK08247        263 AFLNE---QPGVTDVLYPGRGGMLSFRLQD  289 (366)
T ss_pred             HHHHh---CCCeeEEecCCcCcEEEEEECC
Confidence            99998   4666532 34357777777753

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.91  E-value=1.5e-21  Score=195.52  Aligned_cols=345  Identities=12%  Similarity=0.095  Sum_probs=207.0

Q ss_pred             eeEEeecCCccCCCC-ChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         81 PCINFATHNYLSFVE-NPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        81 ~~id~~s~~~l~~~~-~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      ..+||..+++..... .+.+.+++.+.+.+...  ....+....|..++.+.+++.+.+..|.    +.+++++++.+++
T Consensus        31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al  110 (416)
T PRK09440         31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAF  110 (416)
T ss_pred             CceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHH
Confidence            468888765432111 13456666655543111  0011222334445555555555544442    3445555556888


Q ss_pred             HHHHHhhcC-----CCCEEEE-eCcccHHHHHHHHhcC------CeEEEecC------CCHHHHHHHHHhhchhcccCCC
Q psy15447        154 ASAIAAYVK-----RNDAVFV-DENINFAIQTGLIASR------CKVQYFKH------NNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       154 ~~ai~a~~~-----~gd~v~~-~~~~h~~~~~~~~~~g------~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      ..++.++++     +||.|++ ..++|..+.......+      ..+...+.      .|+++++  +   .        
T Consensus       111 ~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~---~--------  177 (416)
T PRK09440        111 FYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--I---D--------  177 (416)
T ss_pred             HHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--c---C--------
Confidence            888888885     5889998 6888877655333222      12222211      2555654  1   1        


Q ss_pred             CccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC
Q psy15447        216 VTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      .+++++++.+++||||.+.+   +++|.++|++||+++|+||+|+.............  .. .++ .|+++||||. +.
T Consensus       178 ~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~--~~-~~~-vI~~~SfSK~-~~  252 (416)
T PRK09440        178 EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATP--LW-NPN-IILCMSLSKL-GL  252 (416)
T ss_pred             CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCc--cc-cCC-eEEEeccccc-CC
Confidence            34578888888999999998   67888899999999999999863211100000000  01 123 4889999996 55


Q ss_pred             cc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH---HhhCc-HHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        293 VG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL---LKANP-SLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       293 ~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~---~~~~~-~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      +|   ||+++++++++.+......+..  +.+.+...++.+.++.   .+... .++..++++.+.+++.|.+.....++
T Consensus       253 pGlRiG~~i~~~~l~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~  330 (416)
T PRK09440        253 PGVRCGIVIADEEIIEALSNMNGIISL--APGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPC  330 (416)
T ss_pred             CcceEEEEeCCHHHHHHHHHHHHHhcc--CCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCe
Confidence            54   9999999999888654433222  2355555555555431   11111 13445566666777776552101245


Q ss_pred             EEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC----CCCCeEEEEecCCCCHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK----KQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~----~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      .+..+.++.++|+.++. ..       ...++.+.|.++||.+.++..+.....    ...+++||+++.  ++++++++
T Consensus       331 ~~~~p~gg~fiw~~~~~~~~-------~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~  401 (416)
T PRK09440        331 LIHKPEGAIFLWLWFKDLPI-------TTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKG  401 (416)
T ss_pred             EEecCCCceEEEEECCCCCC-------CHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHH
Confidence            55445568888988865 22       345788888899999998764321000    013589999973  79999999


Q ss_pred             HHHHHHHHHHhcCC
Q psy15447        441 IETLCKSHDIAVQP  454 (457)
Q Consensus       441 ~~~l~~~~~~~~~~  454 (457)
                      +++|+++++...++
T Consensus       402 i~~l~~~~~~~~~~  415 (416)
T PRK09440        402 IAILAEEVEKAYAE  415 (416)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999998876653

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=7.4e-22  Score=194.58  Aligned_cols=211  Identities=17%  Similarity=0.185  Sum_probs=164.3

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++|++.|.+.++.++||++|+..++.+++++||.|++..+.|+++...+..    .|.++..++..|++++
T Consensus        60 ~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l  139 (388)
T PRK07811         60 NPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAV  139 (388)
T ss_pred             CccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHH
Confidence            456789999999999999999999999999999999999999999999998876544332    4677788888889999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.+           ++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+..+.   .    .+   ..+
T Consensus       140 ~~~i~~-----------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~---p----~~---~ga  198 (388)
T PRK07811        140 RAAITP-----------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ---P----LA---LGA  198 (388)
T ss_pred             HHhcCc-----------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hCC
Confidence            888743           46799999999999999999999999999999999999987654321   1    11   245


Q ss_pred             cEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|++++.    ||++++ ++++.+.++...  ...+...+|..++.++..|+.+   +.++++..+++..+.+
T Consensus       199 Divv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~--~~~g~~~s~~~a~l~~~~L~tl---~~R~~~~~~na~~la~  273 (388)
T PRK07811        199 DVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQ--NGAGAVPGPFDAYLTLRGLKTL---AVRMDRHSENAEAVAE  273 (388)
T ss_pred             cEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHHH
Confidence            89999999999753    587766 466666554321  1223345777766666665544   3467888889999999


Q ss_pred             Hhhccc
Q psy15447        355 LLSQHK  360 (457)
Q Consensus       355 ~L~~~~  360 (457)
                      .|++++
T Consensus       274 ~L~~~p  279 (388)
T PRK07811        274 FLAGHP  279 (388)
T ss_pred             HHHhCC
Confidence            998843

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=8.5e-22  Score=192.04  Aligned_cols=234  Identities=19%  Similarity=0.222  Sum_probs=182.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||++||++.|.+.+++++||+.|+.+++.++.++||.|++....|+.+...+    +..|.++.+++..|+++
T Consensus        60 ~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~  139 (395)
T PRK08114         60 GTLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGAD  139 (395)
T ss_pred             CChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence            46778999999999999999999999999999999999999999999888887766544    44688999999899999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++.++.           ++++|++|++.|++|.+.|+++|.++|+++|  +++++|.+++.+..          +....
T Consensus       140 l~~~l~~-----------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----------~~pl~  198 (395)
T PRK08114        140 IAKLIQP-----------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----------FKALD  198 (395)
T ss_pred             HHHhcCC-----------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----------cCHHH
Confidence            9988853           5689999999999999999999999999984  99999999876532          11222


Q ss_pred             CCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      .++|+++.|.+|.+++    .+|+++.+++..+.++..  ....+..++|..|...+..|+-+.   -++++..+++..+
T Consensus       199 ~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--~~~~G~~~~p~~a~l~~rgl~TL~---lR~~~~~~na~~v  273 (395)
T PRK08114        199 FGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN--SYLMGQMVDADTAYMTSRGLRTLG---VRLRQHEESSLKV  273 (395)
T ss_pred             cCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH--HHhccCCCCHHHHHHHHcCCCcHH---HHHHHHHHHHHHH
Confidence            4569999999999964    347778787765655422  123455689999888777765543   4778899999999


Q ss_pred             HHHhhcccccCCeEEec--------------cCCCCeEEEEecC
Q psy15447        353 HSLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQK  382 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~  382 (457)
                      .+.|++++.+..+..++              ...+.++.+.++.
T Consensus       274 a~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~  317 (395)
T PRK08114        274 AEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK  317 (395)
T ss_pred             HHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence            99999854333232221              1235688888864

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=1.3e-21  Score=191.60  Aligned_cols=247  Identities=14%  Similarity=0.136  Sum_probs=183.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++....|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.....+    ...|.++..++..|+++
T Consensus        51 ~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~  130 (388)
T PRK08861         51 GNPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA  130 (388)
T ss_pred             CCchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence            35667899999999999999999999999999999999999999999998888654432    23467788888788999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+.+           ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+.+..         .++ .+
T Consensus       131 l~~~i~~-----------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~---------pl~-~G  189 (388)
T PRK08861        131 LDAALAK-----------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK---------PLE-LG  189 (388)
T ss_pred             HHHhcCc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC---------Ccc-cC
Confidence            8887743           46799999999999999999999999999999999999997654321         111 24


Q ss_pred             ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+++.    ||+++++ +++.+.++...  ...+..++|..+...+..|+-+.   .++++..+++..+.
T Consensus       190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~--~~~G~~~~p~~a~l~~rgl~Tl~---lR~~~~~~~a~~~a  264 (388)
T PRK08861        190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG--NCIGATGTPFDSYMTLRGIRTLG---ARMRVHEESAQQIL  264 (388)
T ss_pred             CCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHH--hccCCCCChHHHHHHHhcCCCHH---HHHHHHHHHHHHHH
Confidence            689999999999642    6887764 55655554322  23455678998887777765543   47788899999999


Q ss_pred             HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      +.|++++.+..+..++-              ..+.++.+.++.+.      ..+.++++.|.
T Consensus       265 ~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~------~~~~~f~~~l~  320 (388)
T PRK08861        265 AYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSF------EQLKVFVKALA  320 (388)
T ss_pred             HHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCH------HHHHHHHhcCC
Confidence            99998543322222211              12567888886432      13445665554

>KOG1368|consensus

Probab=99.91  E-value=1.8e-22  Score=179.36  Aligned_cols=333  Identities=18%  Similarity=0.236  Sum_probs=231.5

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY  160 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~  160 (457)
                      +.+|+-|... -- +..+.++++.++.--        ...||..+...+||++.|+++|.|..+|++||+.+|..+|...
T Consensus        22 ~~vDLRSDTv-T~-PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~H   91 (384)
T KOG1368|consen   22 RSVDLRSDTV-TV-PTDEMRRAMAEASVG--------DDVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVH   91 (384)
T ss_pred             eccccccccc-cC-ChHHHHHHHhhcccC--------cccccCCccHHHHHHHHHHHhCccceeeecccccccHHHHHHH
Confidence            4566666322 11 346677777666432        2246677788999999999999999999999999999999987


Q ss_pred             cC-CCCEEEEeCcccHHHHHH---HHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        161 VK-RNDAVFVDENINFAIQTG---LIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       161 ~~-~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      |. ||..|++.+.+|...+..   ..+.|+.+.++..     .+++++|+.+.... .+.+.  +.+++|.+|.-++++|
T Consensus        92 c~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~-GD~H~--p~T~LIclENT~~~~G  168 (384)
T KOG1368|consen   92 CHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPK-GDCHM--PPTKLICLENTHNNCG  168 (384)
T ss_pred             hcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCC-CCccC--CCceEEEeeccccccC
Confidence            75 899999999998766543   3445655555432     26899999887432 12333  3678999998887755


Q ss_pred             -CCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHH
Q psy15447        232 -DICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEH  306 (457)
Q Consensus       232 -~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~  306 (457)
                       .+.|+   .++.+||++||+.|++|.+.-|-.--..|-+.-. +.   ..+|-+-.+|||++|. .|..++|++++++.
T Consensus       169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~-i~---~~fDSVsiCLSKglgAPVGSViVG~k~FI~k  244 (384)
T KOG1368|consen  169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKK-IC---SAFDSVSICLSKGLGAPVGSVIVGSKDFIDK  244 (384)
T ss_pred             ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHH-HH---HhhhhhhhhhhccCCCCcccEEEccHHHHHH
Confidence             78885   5888999999999999998544322222222111 11   2235555589999985 57889999999988


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcc
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDD  385 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~  385 (457)
                      .+.....+..+.....+.||+++-+|+.-  .+ ...+-.+++..+.+.+..   ..++++..+ .+++++.+.+..+. 
T Consensus       245 A~~~RKalGGGmRQsGvLaaaaLval~~~--~~-~L~~dHk~A~~lAe~~~~---~~~i~v~v~a~etNiv~~~l~q~~-  317 (384)
T KOG1368|consen  245 ARHFRKALGGGMRQSGVLAAAALVALDEN--VP-LLRADHKRAKELAEYINT---PEEIRVEVPAVETNIVNMVLCQAR-  317 (384)
T ss_pred             HHHHHHHhcCchhHHHHHHHHHHHHhhcc--hH-HHHHHHHHHHHHHHHhcc---ccceeeecchhhcceeeeeccccc-
Confidence            76554333223234777888888776432  22 445555666667777766   344766544 56788877765443 


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH-HHHHHHh
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL-CKSHDIA  451 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l-~~~~~~~  451 (457)
                           ..+..+++.+.++||.+-...         ..++|+.++..+|+++++.+++++ +.++...
T Consensus       318 -----~~~~~l~~~~~k~gi~lm~~~---------s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~  370 (384)
T KOG1368|consen  318 -----LTAEELCKFLEKNGILLMGGA---------SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL  370 (384)
T ss_pred             -----CCHHHHHHHHHHCCeEEeecc---------ccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence                 156789999999999887543         357999999999999999999999 4444443

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.91  E-value=1.9e-21  Score=196.77  Aligned_cols=339  Identities=12%  Similarity=0.088  Sum_probs=215.3

Q ss_pred             eecCCccCCCCChhhHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhcCCCcEEEe-cccHHHHHHH---HH-
Q psy15447         85 FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP-RGFYGTNVVHLDLENDIASFMGLEETALY-SFGFSTSASA---IA-  158 (457)
Q Consensus        85 ~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~a---i~-  158 (457)
                      |.+.++..+.-.|.+.+++.+.....+.++..+ ....|..+...++++.+++++|.+.+.++ ++|+.+...+   +. 
T Consensus        72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~  151 (481)
T PRK04366         72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRA  151 (481)
T ss_pred             eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHH
Confidence            443333333345778887776522223333322 24567889999999999999998766544 5666554432   22 


Q ss_pred             hhcCCCC----EEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        159 AYVKRND----AVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       159 a~~~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ...++||    .|++..+.|+++...+...|.+++.++.     .|++++++.+.+           ++++|++..++ +
T Consensus       152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~-----------~t~~V~v~~Pn-~  219 (481)
T PRK04366        152 YHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGE-----------DTAALMLTNPN-T  219 (481)
T ss_pred             HhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhccc-----------CCeEEEEeCCC-C
Confidence            2345555    8999999999999999999998887764     367888877742           45666677766 8


Q ss_pred             CCCC-CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-------ccEEEecH
Q psy15447        230 SADI-CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-------GGFCVGSS  301 (457)
Q Consensus       230 ~G~i-~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-------gG~v~~~~  301 (457)
                      +|.+ .|+++|.++|+++|+++++|+++..+.+|...        ....++|+++++.+|+||.+       +|+++.++
T Consensus       220 tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~--------~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~  291 (481)
T PRK04366        220 LGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKAR--------PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE  291 (481)
T ss_pred             ccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCC--------ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence            8877 58999999999999999999999765444211        11135699999999998632       26788888


Q ss_pred             HHHHHHHhh-----CCcceecC------------CCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhccccc
Q psy15447        302 YIIEHHRLS-----GSGYCFSA------------SLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       302 ~~~~~~~~~-----~~~~~~~~------------~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      ++.+.+...     ...+.++.            +.+...+.++...+..+..+  .+..++..++++++++.|++   +
T Consensus       292 ~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~---~  368 (481)
T PRK04366        292 ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD---I  368 (481)
T ss_pred             hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh---h
Confidence            777665210     11121111            11222223333333333221  23346677789999999988   2


Q ss_pred             CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                        +++... ...+..+.+.... .........++.++|.++||.+....+|.    ...+.+|++++..+|++|||++++
T Consensus       369 --~~~~~~-~~~~~~~~~~~~~-~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t~edid~l~~  440 (481)
T PRK04366        369 --YDLPYD-RPCMHEFVLSGKK-LKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETESKETLDAFIA  440 (481)
T ss_pred             --CcccCC-CCeeEEEEEECcc-ccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCCHHHHHHHHH
Confidence              222211 1111112221100 00000035679999999999876444331    125689999999999999999999


Q ss_pred             HHHHHHHHhcCC
Q psy15447        443 TLCKSHDIAVQP  454 (457)
Q Consensus       443 ~l~~~~~~~~~~  454 (457)
                      +|+++.+++.+.
T Consensus       441 ~l~~i~~~~~~~  452 (481)
T PRK04366        441 AMKQIAEEAKEN  452 (481)
T ss_pred             HHHHHHHHHHhC
Confidence            999998887654

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.91  E-value=1e-21  Score=192.48  Aligned_cols=299  Identities=16%  Similarity=0.188  Sum_probs=202.6

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCC-ccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc----CCC-C
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRG-FYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV----KRN-D  165 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~-~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~----~~g-d  165 (457)
                      ++.+.+++.+.+.... +..+.+. .++  ..+..+++++++++++|.+  .+++++++++++..++.++.    ++| +
T Consensus        11 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~   89 (353)
T TIGR03235        11 DPAVAEAMLPWLLEEF-GNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKK   89 (353)
T ss_pred             CHHHHHHHHHHHHhcC-CCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCC
Confidence            5789999998886522 1222211 111  2356788999999999965  45555666789888887765    355 7


Q ss_pred             EEEEeCcccHHHHHHH---HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        166 AVFVDENINFAIQTGL---IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       166 ~v~~~~~~h~~~~~~~---~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      .|++....|++.....   ...|.++..++.     .|++++++.++           +++++|++++++|++|.+.|++
T Consensus        90 ~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-----------~~~~lv~~~~~~n~tG~~~~~~  158 (353)
T TIGR03235        90 HIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIR-----------PDTLLVSIMHVNNETGSIQPIR  158 (353)
T ss_pred             eeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCC-----------CCCEEEEEEcccCCceeccCHH
Confidence            8999988888765543   345778877654     37788887764           2457899999999999999999


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhC--C--
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSG--S--  312 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~--~--  312 (457)
                      +|.++|++||+++|+|++|++|...         .++...++|+++.|.+|++|+.| |+++.+++..+..+...  .  
T Consensus       159 ~I~~l~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~  229 (353)
T TIGR03235       159 EIAEVLEAHEAFFHVDAAQVVGKIT---------VDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGG  229 (353)
T ss_pred             HHHHHHHHcCCEEEEEchhhcCCcc---------ccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCC
Confidence            9999999999999999999877542         23333467999999999988655 78877776432211000  0  


Q ss_pred             c---ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeEEEEecCCcc
Q psy15447        313 G---YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLKYLYLQKSDD  385 (457)
Q Consensus       313 ~---~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~  385 (457)
                      .   ....++.++...++..++++++.+. +...++++++.+++++.|++    .|+++..++.   ..++.+.++..  
T Consensus       230 ~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~----~g~~~~~~~~~~~~~i~~~~~~~~--  303 (353)
T TIGR03235       230 GQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT----LGVKLNGDPAETIPHILNFSIDGV--  303 (353)
T ss_pred             CCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc----CCeEEeCCcccccCCEEEEEeCCc--
Confidence            0   0112345666666677788876543 45778999999999999988    7888764322   33555554432  


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                            ...++.+.|. +||.++++..|..... .+..+|.++.
T Consensus       304 ------~~~~v~~~L~-~~i~v~~g~~~~~~~~-~~~~~l~~~g  339 (353)
T TIGR03235       304 ------NSEALIVNLR-ADAAVSTGSACSSSKY-EPSHVLQAMG  339 (353)
T ss_pred             ------CHHHHHHHHh-CCeEEEchhhcCCCCC-CCCHHHHHcC
Confidence                  3456778885 4899988876643111 1234555554

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.91  E-value=1e-21  Score=192.11  Aligned_cols=291  Identities=14%  Similarity=0.148  Sum_probs=202.9

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+|++++|++.+.+.+++++||++|+..++.+++++||.|++..+.|+.+..    .+...|.++..++..+.+.+
T Consensus        60 npt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l  139 (394)
T PRK09028         60 TPTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI  139 (394)
T ss_pred             CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence            45567999999999998889999999999999999999999999998888876653    23446778877877777888


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.           +++++|++|++.||+|.+.++++|.++|++||+++++|++|+.+..-.         .+ ..++
T Consensus       140 ~~~l~-----------~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~---------Pl-~~Ga  198 (394)
T PRK09028        140 RELIR-----------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSR---------PF-EMGV  198 (394)
T ss_pred             HHhcC-----------cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCC---------cc-ccCc
Confidence            77764           356899999999999999999999999999999999999997653210         11 1356


Q ss_pred             cEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      |+++.|.+|++++.    +|+++.++++.+.++...  ...+..++|..|...+..|+-+.   .++++..+++..+.+.
T Consensus       199 Divv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~--~~~G~~~~p~~a~l~~rgl~TL~---lR~~~~~~na~~la~~  273 (394)
T PRK09028        199 DISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS--YLMGQCTSPDDVYLAMRGLRTLG---VRLAQHEKNALKVANW  273 (394)
T ss_pred             eEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHH
Confidence            99999999999654    577777777666554321  23455689999888877776553   4788899999999999


Q ss_pred             hhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc
Q psy15447        356 LSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ  415 (457)
Q Consensus       356 L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~  415 (457)
                      |++++.+..+..++-              ..+.++.+.++...     .....++.+.|.=-.+.++.+      .+|..
T Consensus       274 L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-----~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~  348 (394)
T PRK09028        274 LATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-----PKAVTALVEGMQHFKMGFSWGGFESLILGVFG  348 (394)
T ss_pred             HhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-----HHHHHHHHHhCCcceEecccCCCcceeECCCC
Confidence            998543333222210              12568888886321     013456666654111111111      11110


Q ss_pred             --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                              .....++.+||++.+...++=++.+.++|+
T Consensus       349 ~~~~~~~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~  386 (394)
T PRK09028        349 INKLRTATNWDFSKPLIRLHIGLEDVDDLIADLEAGFE  386 (394)
T ss_pred             cCccCchhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence                    001223689999988654444444444444

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.91  E-value=5.4e-21  Score=182.48  Aligned_cols=309  Identities=17%  Similarity=0.192  Sum_probs=221.9

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      .+..+++.+.++.-...         ..+...++|+++++++|.+.++.++||+.|+..+++++ .++||.|+++..++.
T Consensus        15 ~~e~~~v~~vl~sg~i~---------~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tfv   85 (374)
T COG0399          15 EEELAAVQEVLKSGWLT---------GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFV   85 (374)
T ss_pred             hHHHHHHHHHHHcCCee---------cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchH
Confidence            45677777777752222         24567899999999999999999999999999999965 599999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++..++...|++++.++-+      |++.+|+.|..           ++++|+.-+.+   |..+++++|.+||++||++
T Consensus        86 ATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~-----------~tKAIipVhl~---G~~~dm~~i~~la~~~~l~  151 (374)
T COG0399          86 ATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP-----------RTKAIIPVHLA---GQPCDMDAIMALAKRHGLP  151 (374)
T ss_pred             HHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc-----------CCeEEEEehhc---cCCCCHHHHHHHHHHcCCe
Confidence            9999999999998887643      88999999864           46788877766   7799999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEec-HHHHHHHH---hhCCc------c--
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVGS-SYIIEHHR---LSGSG------Y--  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~~-~~~~~~~~---~~~~~------~--  314 (457)
                      +|.|.+|++|..-. |+.. ..+|      |+.+.||  .|.++. -||+++++ +++.+.++   ..+..      |  
T Consensus       152 vIEDaAqa~Ga~y~-gk~v-Gt~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~  223 (374)
T COG0399         152 VIEDAAQAHGATYK-GKKV-GSFG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLH  223 (374)
T ss_pred             EEEEcchhccCeec-Cccc-cccc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCcccccee
Confidence            99999999886532 2211 1233      5666677  788854 58887776 45555543   33322      1  


Q ss_pred             ---eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecCC-cc
Q psy15447        315 ---CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQKS-DD  385 (457)
Q Consensus       315 ---~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~~-~~  385 (457)
                         .+...++.+.+|.++..|+.+++   +.++-+++.+++.+.|++   .+++.+.....     ..+..+.+... . 
T Consensus       224 ~~~G~N~rm~~iqAAigl~QL~~l~~---~~~~R~~~a~~Y~~~l~~---~~~~~~p~~~~~~~~~~~~~~i~~~~~~~-  296 (374)
T COG0399         224 EELGYNYRLTEIQAAIGLAQLERLDE---INERRREIAQIYAEALKG---LPGITLPPEPDGAVHAWHLYTILVDEEGI-  296 (374)
T ss_pred             eecccccCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhc---CCCccccCCCCCceeeeeeeEEEecCCCC-
Confidence               22334788888888888887765   556666778888888887   33444332222     23344455543 2 


Q ss_pred             hHHHHHHHHHHHHHHHHcCee----EeccccCcc--cc--------CC----CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFA----ITCPSHLDQ--EA--------KK----QKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~----v~~~~~~~~--~~--------~~----~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                            ....+.+.|.++||.    .+|...+..  ..        +.    ....+++.....+|++|+++++++|+++
T Consensus       297 ------~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~  370 (374)
T COG0399         297 ------SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEV  370 (374)
T ss_pred             ------CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                  456789999999665    233211100  00        00    1456889888999999999999999988


Q ss_pred             HH
Q psy15447        448 HD  449 (457)
Q Consensus       448 ~~  449 (457)
                      +.
T Consensus       371 ~~  372 (374)
T COG0399         371 LG  372 (374)
T ss_pred             hc
Confidence            75

>PLN02397 aspartate transaminase

Probab=99.90  E-value=2.1e-21  Score=193.98  Aligned_cols=334  Identities=11%  Similarity=0.019  Sum_probs=205.2

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhc--CCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcE----EEecc
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKN--GVGSCGPRGFYGTNVVHLDLENDIASFMGL----EET----ALYSF  148 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~--~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~----i~~~s  148 (457)
                      +...+|++.+.+.....+|.+.+++.+.....  ......+....|..++++.+++.+.+..+.    +.+    ++.++
T Consensus        47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~  126 (423)
T PLN02397         47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT  126 (423)
T ss_pred             CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence            34568887766545545565566666654322  111112223345545444444444332221    112    22233


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      |+.++..++.+++.+||.|+++.++|..+...++..|.+++.++.       .|++.+++.+++..        ++++++
T Consensus       127 Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~--------~~~~~i  198 (423)
T PLN02397        127 GSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAP--------DGSFVL  198 (423)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCC--------CCCEEE
Confidence            444455555555679999999999999999999999999887753       26778877776432        356888


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc--cccccCCCCCCccEEEecCcccccCcc--
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG--VTEYFGVSTEEVDMIIGSLEHALGSVG--  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~--~~~~~~~~~~~~Di~~~s~sK~lg~~g--  294 (457)
                      ++.+++||||.+.+   +++|.++|++||+++|+||+|....++.....  ....+....++ .|+++||||+++++|  
T Consensus       199 ~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~-vI~~~SfSK~~~~~G~R  277 (423)
T PLN02397        199 LHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE-ILVAQSYAKNMGLYGER  277 (423)
T ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCc-EEEEEECcccCCCcccc
Confidence            89999999999988   66888899999999999999976554321000  11111111122 488999999998765  


Q ss_pred             -cEEE---ecHHHHHHHH----hhCCcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        295 -GFCV---GSSYIIEHHR----LSGSGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       295 -G~v~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                       ||++   +++++++.+.    .... ..+. +.+.+.++++.+.|+.-       +...+.+++++++.+.+.+.|+++
T Consensus       278 vG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~  355 (423)
T PLN02397        278 VGALSVVCKSADVAVRVKSQLKLIAR-PMYS-NPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR  355 (423)
T ss_pred             ceEEEEEeCCHHHHHHHHHHHHHHHh-cccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             9973   4555544332    2111 1121 22444445554444221       111345678889999999999882


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      ....++++..+.++.++|+.+.            .+++++|+++ ||++.+           .+  |+++.. .++++++
T Consensus       356 ~~~~~~~~~~p~gg~fl~~~l~------------~~~~~~Ll~~~~V~v~~-----------~~--Ri~~~~-~~~~~i~  409 (423)
T PLN02397        356 GSPGDWSHITKQIGMFSFTGLN------------KEQVDRMTKEYHIYMTR-----------DG--RISMAG-LSSKNVP  409 (423)
T ss_pred             CCCCCCCcccCCceEEEecCCC------------HHHHHHHHHhCCEEECC-----------CC--eEEEee-CCHHHHH
Confidence            1001255544556667776552            1477777654 999852           12  888853 6899999


Q ss_pred             HHHHHHHHHHH
Q psy15447        439 SLIETLCKSHD  449 (457)
Q Consensus       439 ~~~~~l~~~~~  449 (457)
                      +++++|++++.
T Consensus       410 ~~~~~i~~~~~  420 (423)
T PLN02397        410 YLADAIHAVVT  420 (423)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.90  E-value=6.3e-21  Score=188.31  Aligned_cols=344  Identities=13%  Similarity=0.093  Sum_probs=221.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      |..+|||-+-.     +...+.++..+++..-..+       |+...-..+|++.+++++|.+.++.+++|+.|+..++.
T Consensus        19 ~~v~iDlltds-----~t~ams~~~~~a~~~gd~~-------Y~~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~   86 (431)
T cd00617          19 EDVYIDLLTDS-----GTGAMSDYQWAAMMLGDEA-------YAGSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFS   86 (431)
T ss_pred             CCcCCCCCCCC-----CcHHHHHHHHHHHHhCCCc-------cCCCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHH
Confidence            45566665421     1245666656666531112       22333457999999999999999999999999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +++++||.| ...+.+.++...+...|++++.++.               .|+++|++.+.+..       ..++++|++
T Consensus        87 al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~-------~~~~~~I~v  158 (431)
T cd00617          87 ILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG-------AENIPYIVL  158 (431)
T ss_pred             HhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCccc-------CCCccEEEE
Confidence            999999987 4666666677778888877665432               37889999986531       134678888


Q ss_pred             ecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCcccc-cc-------cCCCCcccc----ccCCCCCCccEEEecCc
Q psy15447        224 EGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSFG-TL-------GSTGHGVTE----YFGVSTEEVDMIIGSLE  287 (457)
Q Consensus       224 e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~~-------g~~g~~~~~----~~~~~~~~~Di~~~s~s  287 (457)
                      +.++|++ |.+.+   +++|+++|++||++||.|+++..+ .+       |..+..+.+    .+.    -.|.+..|+.
T Consensus       159 ~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s----~sd~~~mS~~  234 (431)
T cd00617         159 TITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFS----YADGCTMSAK  234 (431)
T ss_pred             ECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhc----cCCEEEEEee
Confidence            8888886 88876   568899999999999999997543 11       111111111    111    1256666777


Q ss_pred             ccccC-cccEEEecH-HHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        288 HALGS-VGGFCVGSS-YIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       288 K~lg~-~gG~v~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      |..+. .||++++++ ++++.++...   .++...+++++-..++...+|+...+ .+..++..++.+++.+.|++    
T Consensus       235 K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l~~~~~~r~~l~~~L~~----  309 (431)
T cd00617         235 KDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYLRHRVEQVRYLGDRLDE----  309 (431)
T ss_pred             cCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHH----
Confidence            86643 488999986 5888876432   22222233455544443334433211 22334444466899999998    


Q ss_pred             CCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHH-cCeeEecccc------Ccc-c-cCCCCCeEEEEecC-C
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQ-AGFAITCPSH------LDQ-E-AKKQKPSIRITCNI-S  431 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~-~Gi~v~~~~~------~~~-~-~~~~~~~lRi~~~~-~  431 (457)
                      .|+++..+.+++.+++.+..-.+. ...+....+++.+|.+ .||.+...+-      |.. + ....-+.+|+.+|- .
T Consensus       310 ~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~  389 (431)
T cd00617         310 AGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV  389 (431)
T ss_pred             CCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence            688888777788888876531000 0001135678866665 4888653221      111 0 01124789999875 6


Q ss_pred             CCHHHHHHHHHHHHHHHHHh
Q psy15447        432 HTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~~~~~  451 (457)
                      .|.+++|.++++|..+.+..
T Consensus       390 ~t~~~~~~~~~~~~~~~~~~  409 (431)
T cd00617         390 YTQDHMDYVAAAVIALYERR  409 (431)
T ss_pred             cCHHHHHHHHHHHHHHHhhH
Confidence            79999999999999988754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PLN02509 cystathionine beta-lyase

Probab=99.90  E-value=1.7e-21  Score=193.91  Aligned_cols=288  Identities=14%  Similarity=0.171  Sum_probs=200.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+++++++++.|.+.++++++|..|+..++ .++++||.|++..+.|+.+.    ..+...|.++..++..|++++
T Consensus       132 npt~~aLE~~lA~leg~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l  210 (464)
T PLN02509        132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEV  210 (464)
T ss_pred             CHHHHHHHHHHHHHhCCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHH
Confidence            4678999999999999999999999998875444 67899999999999988765    334567888889988899888


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.           +++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+..+.   .    .+   .++
T Consensus       211 ~~ai~-----------~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---p----l~---~ga  269 (464)
T PLN02509        211 AAAIG-----------PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---P----LE---LGA  269 (464)
T ss_pred             HHhCC-----------cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC---h----hh---cCC
Confidence            88774           356899999999999999999999999999999999999987765432   1    11   245


Q ss_pred             cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|++++    .||+++++ +.+.+.++...  ...+..++|..|+.++..|+.+.   .++++.++++.++.+
T Consensus       270 Divv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~--~~~g~~l~p~~A~l~lr~L~tL~---~R~~r~~~nA~~la~  344 (464)
T PLN02509        270 DIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAM  344 (464)
T ss_pred             cEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH--HhcCCCcCHHHHHHHHhhhhhHH---HHHHHHHHHHHHHHH
Confidence            8999999999964    25777764 43433332111  11233478999999988888774   378899999999999


Q ss_pred             HhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccCc
Q psy15447        355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHLD  414 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~  414 (457)
                      .|++++.+..+..++-              ..+.++.+.+++..       .+.++.+.|.=-.+.+..+      .+|.
T Consensus       345 ~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~-------~~~~f~~~l~l~~~a~slG~~~SLi~~p~  417 (464)
T PLN02509        345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA-------LSKHLVETTKYFSIAVSFGSVKSLISMPC  417 (464)
T ss_pred             HHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHH-------HHHHHHHcCCcceEcccCCCCCceeeCCc
Confidence            9998543333322221              12557777774221       4455666554111111111      1111


Q ss_pred             c------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        415 Q------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       415 ~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .            .....++.+|+++.+.    +.|.+++-|+++++
T Consensus       418 ~~sh~~~~~~~~~~~Gi~~~liRlSvGlE----~~~DLi~Dl~~Al~  460 (464)
T PLN02509        418 FMSHASIPAEVREARGLTEDLVRISAGIE----DVDDLISDLDIAFR  460 (464)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHc
Confidence            1            0112357899999864    45555555555554

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.90  E-value=5.5e-21  Score=188.86  Aligned_cols=293  Identities=16%  Similarity=0.156  Sum_probs=201.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++++|++.|.+.+++++||++|+..++.+++++||.|++..+.|+.....    ....|.++..++..|+++
T Consensus        58 ~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~  137 (405)
T PRK08776         58 GNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS  137 (405)
T ss_pred             CChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence            4566788999999999998999999999999999999999999999998888764432    344577888888888999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++||+|.+.++++|.++|++||+++|+||+|..+..-   .      .+. .+
T Consensus       138 l~~~i~~-----------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~---~------pl~-~g  196 (405)
T PRK08776        138 LADALAQ-----------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ---K------PLE-FG  196 (405)
T ss_pred             HHHhcCc-----------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC---C------ccc-cc
Confidence            8887743           4578899999999999999999999999999999999998654211   1      111 24


Q ss_pred             ccEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|.+|.+++.    ||++++ ++++.+.++....  ..+..++|+.++..+..++.++   .++++..+|...+.
T Consensus       197 aDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~--~~g~~~s~~~a~l~~~gl~tl~---~r~~~~~~na~~la  271 (405)
T PRK08776        197 ADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWAN--ALGLTGSPFDAFLTLRGLRTLD---ARLRVHQENADAIA  271 (405)
T ss_pred             CCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhCcHH---HHHHHHHHHHHHHH
Confidence            589999999999643    476655 5677666643221  1233468888888877766553   47889999999999


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccC
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~  413 (457)
                      +.|++++.+..+..++              ...+.++.+.++.+.      ....++.+.|.=-.+..+.+      .+|
T Consensus       272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~l~~~~~s~G~~~sl~~~p  345 (405)
T PRK08776        272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGE------AAVRAFVDGLRYFTLAESLGGVESLIAHP  345 (405)
T ss_pred             HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCH------HHHHHHHHhCCcceEccCCCCCceEEECC
Confidence            9998844332222211              112557888886432      13455666554211111111      111


Q ss_pred             cc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        414 DQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       414 ~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ..    .        ....++.+|+++.+...++=++.+-++|+++
T Consensus       346 ~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~  391 (405)
T PRK08776        346 ASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA  391 (405)
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence            11    0        0122568999999876555445555555443

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=2.2e-21  Score=191.34  Aligned_cols=295  Identities=11%  Similarity=0.076  Sum_probs=203.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++...+|+++++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+..    .....|.++..++..+.++
T Consensus        63 ~~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~  142 (394)
T PRK07050         63 ATPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAG  142 (394)
T ss_pred             CCHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHH
Confidence            356678999999999999999999999999999999999999999999999887553    3456688888888767777


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++|++.|++|.+.++++|.++|+++|+++|+|++|+.|..-   +      +.. .+
T Consensus       143 l~~~i~-----------~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~---~------~l~-~G  201 (394)
T PRK07050        143 IADLIQ-----------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF---K------PFE-HG  201 (394)
T ss_pred             HHHhcC-----------CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc---C------HHH-cC
Confidence            877764           35689999999999999999999999999999999999999876432   1      111 24


Q ss_pred             ccEEEecCcccccC----cccEE-EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFC-VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+++    .||++ ++++++++.++...  ...+.+.+|..+..++..++.+   ..++++..+++.++.
T Consensus       202 aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~--~~~G~~~~~~~a~l~lr~l~tl---~~Rl~~~~~~a~~la  276 (394)
T PRK07050        202 VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR--MRLGIGVSADDCSLVLRGLPSL---QVRLAAHDRSALEVA  276 (394)
T ss_pred             CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcCCCcH---HHHHHHHHHHHHHHH
Confidence            58999999999953    25654 45677777775432  2234566777766555444333   346777778888888


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----  415 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----  415 (457)
                      +.|++.+.+..+..++              ...+.++.+.+.....    .....++.+.|...++.++.+..-+.    
T Consensus       277 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~  352 (394)
T PRK07050        277 EWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYS----PAQVDAFVEALELFAIGWSWGGACSLAMPY  352 (394)
T ss_pred             HHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCC----HHHHHHHHHcCCCCeeccccCCccceEeeC
Confidence            8888743222211111              0124567777754210    11456777777766654443322110    


Q ss_pred             --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                              +....++.+|+++.+...++=++.+.++|+.+
T Consensus       353 ~~~~~~~~~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~  392 (394)
T PRK07050        353 DVASMRTAKWPHRGTLVRLYIGLEDEADLIADLEQALEAA  392 (394)
T ss_pred             cccccchhhcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence                    11123468999998765444455555555543

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.90  E-value=1.4e-21  Score=194.27  Aligned_cols=327  Identities=11%  Similarity=0.037  Sum_probs=204.4

Q ss_pred             eeEEeecCCcc--CCC-C-ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcE--EEecccH
Q psy15447         81 PCINFATHNYL--SFV-E-NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEET--ALYSFGF  150 (457)
Q Consensus        81 ~~id~~s~~~l--~~~-~-~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~--i~~~sG~  150 (457)
                      ..|||+.+.+.  +.. . .+.+.+++.+.++....  ..+....|..++.+.+++.+.+..+    .++.  +++++++
T Consensus        27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~--~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~  104 (396)
T PRK09257         27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETT--KNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGT  104 (396)
T ss_pred             CcEecceeeEECCCCCEeccHHHHHHHHHhcccccC--CCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCcc
Confidence            46888876431  111 1 25677777766543211  1222334565555555555544332    2233  4555666


Q ss_pred             HHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        151 STSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       151 ~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +|+..++.++  +++||.|+++.++|..+...++..|.+++.++.       .|++++++.+++..        .+++++
T Consensus       105 ~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~--------~~~~~~  176 (396)
T PRK09257        105 GALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAP--------AGDVVL  176 (396)
T ss_pred             HHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCC--------CCCEEE
Confidence            8988888665  489999999999999999999999999887763       26788888876532        335788


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccccccCCCCCCccEEEecCcccccCcc--
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYFGVSTEEVDMIIGSLEHALGSVG--  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--  294 (457)
                      ++.+++||||.+.+   +++|.++|++||+++|+||+|+...++..  -..+....+. .++ .|+++||||.++.+|  
T Consensus       177 i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~~~-vi~i~SfSK~~~~~GlR  254 (396)
T PRK09257        177 LHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAA-GLE-LLVASSFSKNFGLYGER  254 (396)
T ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhc-CCc-EEEEEEcCCcCcccccc
Confidence            88999999999988   67889999999999999999875333200  0111111111 123 488999999998655  


Q ss_pred             -cEEEe---cHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        295 -GFCVG---SSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       295 -G~v~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                       ||+++   +++.    +..+..... ..+. +.+++...++.+.+..       .+..++.+++++++.+.+.+.|++.
T Consensus       255 iG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~  332 (396)
T PRK09257        255 VGALSVVAEDAEEADRVLSQLKATIR-TNYS-NPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAK  332 (396)
T ss_pred             ceeEEEEeCCHHHHHHHHHHHHHHhh-hhcC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence             99862   4333    333322111 1122 1244444444433321       1112346778888999999999883


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      ....++.+..+.++.++|+.+..            +++..+ .++||++.+           .+  ||+++. .++++|+
T Consensus       333 ~~~~~~~~~~p~gg~~~w~~l~~------------~~~~~l~~~~~V~~~p-----------~~--ri~~~~-~~~~~i~  386 (396)
T PRK09257        333 GPSRDFDFIARQRGMFSYSGLTP------------EQVDRLREEFGVYAVG-----------SG--RINVAG-LNESNID  386 (396)
T ss_pred             CCCCCcccccccceEEEecCCCH------------HHHHHHHHcCCEEEcC-----------CC--eEEEee-CCHHHHH
Confidence            10013555545567777776531            233444 566998753           12  888854 7899999


Q ss_pred             HHHHHHHHH
Q psy15447        439 SLIETLCKS  447 (457)
Q Consensus       439 ~~~~~l~~~  447 (457)
                      ++++.|+++
T Consensus       387 ~~~~~i~~~  395 (396)
T PRK09257        387 YVAEAIAAV  395 (396)
T ss_pred             HHHHHHHhh
Confidence            999999875

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.90  E-value=2.1e-21  Score=190.75  Aligned_cols=289  Identities=14%  Similarity=0.144  Sum_probs=201.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++++++|.+.++++++|+.|+..++. ++++||.|++..+.|+++...    +...|.++..++..|++++
T Consensus        46 ~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~l  124 (378)
T TIGR01329        46 NPTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKV  124 (378)
T ss_pred             ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHH
Confidence            45678999999999999999999999998887665 789999999998888776543    3456899999998899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++++|++|++.|++|.+.|+++|.++|++||+++|+|++++.+...   ..+    +   .++
T Consensus       125 e~~i~-----------~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~---~~l----~---~g~  183 (378)
T TIGR01329       125 KAALG-----------PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC---NPL----E---LGA  183 (378)
T ss_pred             HHhcC-----------cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---Chh----h---cCC
Confidence            88874           35689999999999999999999999999999999999998654321   111    1   245


Q ss_pred             cEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|.+++.    ||++++ ++.+.+.++...  ...+..++|..++.++..++.   .+.++++..+++..+.+
T Consensus       184 Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~--~~~G~~~~~~~a~l~~~~l~t---l~~R~e~~~~na~~la~  258 (378)
T TIGR01329       184 DIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQ--NSTGSGLAPFDCWLLLRGIKT---LAIRIEKQQENARAIAM  258 (378)
T ss_pred             cEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHH--HhcCCcCCHHHHHHHHccCCC---HHHHHHHHHHHHHHHHH
Confidence            89999999999642    688766 455555554322  113445677776655554433   34577888888888888


Q ss_pred             HhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447        355 LLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD  414 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~  414 (457)
                      .|+++..+..+...+              ...+.++.+.+++..       .+.++++.|...++.++.+..      |.
T Consensus       259 ~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~-------~~~~~~~~L~~~~i~~s~G~~~sl~~~p~  331 (378)
T TIGR01329       259 FLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVA-------LSKRLVEATKLFSITVSFGSVNSLISMPC  331 (378)
T ss_pred             HHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHH-------HHHHHHHhCcCcccccCCCCCCceeeCCC
Confidence            888743221111111              122568888884321       466888888655666655433      21


Q ss_pred             c----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        415 Q----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       415 ~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .    .        ....++.+|+++.+.    |.+.+++-|+++++.
T Consensus       332 ~~~~~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~~  375 (378)
T TIGR01329       332 FMSHASIPAEVREERGLPEDLVRLSVGIE----DVDDLISDLDIAFVT  375 (378)
T ss_pred             ccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence            1    0        011256899999864    455555555555543

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.90  E-value=3.6e-21  Score=191.45  Aligned_cols=295  Identities=15%  Similarity=0.180  Sum_probs=203.6

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEec-CCCHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFK-HNNMQH  198 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~-~~d~~~  198 (457)
                      ++....|++.||++.|.+.+++++||++|+..++.+++++||.|+++.+.|+.+...    +...|.+++.++ ..|+++
T Consensus        82 ~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~  161 (427)
T PRK07049         82 HPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA  161 (427)
T ss_pred             CcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence            455789999999999999999999999999999999999999999999988776544    345677755544 567888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH------cCcEEEEEcCcccccccCCCCcccccc
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                      +++.+.+...      .+++++|++|+++||+|.+.++++|.+++++      +++++|+||++..... .  .      
T Consensus       162 l~~~l~~~~~------~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~-~--~------  226 (427)
T PRK07049        162 IGAAAEAAAA------KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF-Q--K------  226 (427)
T ss_pred             HHHHHHhhcc------CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccccc-C--C------
Confidence            8887764321      1356899999999999999999999999988      8999999999643211 0  0      


Q ss_pred             CCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK  348 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~  348 (457)
                      .+. .+.||++.|+||.+|+    .+||+++++++++.++...  ..++..++|..+.+++..++.+.   .++++..++
T Consensus       227 pl~-~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~--~~~g~~ls~~~a~l~~r~L~tl~---~R~~~~~~~  300 (427)
T PRK07049        227 PLE-HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR--SAIGTQLDPHSCWMLGRSLETLV---LRMERANRN  300 (427)
T ss_pred             ccc-cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH--HhcCCCCCHHHHHHHHcCCChHH---HHHHHHHHH
Confidence            111 2348999999999974    3599999999888876533  23455678988888887776543   356777889


Q ss_pred             HHHHHHHhhcccccCCeEEecc----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc--
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGH----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP--  410 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~--  410 (457)
                      +..+.+.|++++.+..+..++-                ..+.++.+.++++.      ..+.++++.|.=-.+.++.+  
T Consensus       301 a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~l~~~~~slG~~  374 (427)
T PRK07049        301 ARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQ------AAAFRFLNALQIFKLAVSLGGT  374 (427)
T ss_pred             HHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCH------HHHHHHHHcCcccEEcccCCCC
Confidence            9999999998543332222210                12557888876432      13455666554212111111  


Q ss_pred             ----ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        411 ----SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       411 ----~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                          .+|..            .....++.+||++.+.    |.|.+++-|+++++
T Consensus       375 ~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE----~~~dl~~dl~~al~  425 (427)
T PRK07049        375 ESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIE----HPDDLIADLAQALD  425 (427)
T ss_pred             CceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHHHHHHHh
Confidence                11111            0112256899999864    45555555555543

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.90  E-value=1.2e-20  Score=185.10  Aligned_cols=308  Identities=16%  Similarity=0.179  Sum_probs=213.5

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      .+..+++.+.++.-..+        ...+...++|+++++++|.+.++.++||+.|+..++.++ .++||.|+++...+.
T Consensus         5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~   76 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFP   76 (363)
T ss_dssp             HHHHHHHHHHHHHTCCS--------SSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-T
T ss_pred             HHHHHHHHHHHHhCCcc--------CCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcch
Confidence            45567777777762211        115778999999999999999999999999999999987 479999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++..++...|.+++.++.+      |++++++.+.+           ++++|++.+.+   |..+++++|.++|++||++
T Consensus        77 ~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~-----------~t~ai~~~h~~---G~~~d~~~i~~~~~~~~i~  142 (363)
T PF01041_consen   77 ATASAILWAGAEPVFVDIDPETLNIDPEALEKAITP-----------KTKAILVVHLF---GNPADMDAIRAIARKHGIP  142 (363)
T ss_dssp             HHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT-----------TEEEEEEE-GG---GB---HHHHHHHHHHTT-E
T ss_pred             HHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc-----------CccEEEEecCC---CCcccHHHHHHHHHHcCCc
Confidence            9999999999999887643      79999999874           44788777766   6788999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEec-HHHHHHHHhh---CC------c---
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGS-SYIIEHHRLS---GS------G---  313 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~-~~~~~~~~~~---~~------~---  313 (457)
                      ||.|.+|++|..-. |+.. ..+|      |+.+.||  +|.+. +.||+++.+ +++.+.++..   +.      .   
T Consensus       143 lIeD~a~a~g~~~~-g~~~-G~~g------d~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  214 (363)
T PF01041_consen  143 LIEDAAQAFGARYK-GRPV-GSFG------DIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYRH  214 (363)
T ss_dssp             EEEE-TTTTT-EET-TEET-TSSS------SEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTEE
T ss_pred             EEEccccccCceeC-CEec-cCCC------CceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCccccccccc
Confidence            99999999876421 2211 1122      6888898  58884 457887775 5555555431   11      1   


Q ss_pred             ---ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC------CCeEEEEecCCc
Q psy15447        314 ---YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD------TPLKYLYLQKSD  384 (457)
Q Consensus       314 ---~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~------~~~~~i~~~~~~  384 (457)
                         ..+...++++.++.++..|+.+++   ..++-+++.+++.+.|++   .+++.......      ...+++.+++..
T Consensus       215 ~~~~g~n~rm~~~~AAigl~QL~~L~~---~~~~R~~~a~~y~~~L~~---~~~~~~~~~~~~~~~~~~~~f~i~~~~~~  288 (363)
T PF01041_consen  215 ELPPGYNFRMSELQAAIGLAQLKRLDE---IIARRRENAQRYREALAG---IPGIKPPPIPDGAERSSYYRFPIRLPDEA  288 (363)
T ss_dssp             SSSS--B-B-BHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHHHHTT---GTTEEEEGCGTTTEEBCESSEEEEETCCG
T ss_pred             cccCCcccccHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhc---CCCcccccccccccccccccccccccccc
Confidence               122334799998988888877754   567777889999999988   56664433222      234566666541


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEecccc-CccccC---------C-C--------CCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPSH-LDQEAK---------K-Q--------KPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~~---------~-~--------~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      ..     ...++.+.|.++||...+... |....+         . .        ...+.+..+...|++|+++++++|+
T Consensus       289 ~~-----~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  289 LA-----DRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             CS-----THHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             cc-----hHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence            00     346799999999999887552 221000         0 0        3358888889999999999999885

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.90  E-value=2.3e-20  Score=183.10  Aligned_cols=312  Identities=13%  Similarity=0.113  Sum_probs=210.6

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      ++..+++.+.+.. +.       .+|..+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus        11 ~~e~~a~~~~~~~-~~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~   82 (376)
T TIGR02379        11 GQELEYIAEAISE-GK-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV   82 (376)
T ss_pred             HHHHHHHHHHHHc-CC-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence            4557777777764 21       12345678999999999999999999999999999888887 799999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...+...|.+++.++.+      |++++++.+..           ++++|+.   .+++|...++++|.++|++||++
T Consensus        83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-----------~tk~Iip---~~~~G~~~d~~~I~~la~~~~i~  148 (376)
T TIGR02379        83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-----------RTKAIVP---VHYAGVACDMDTIMALANKHQLF  148 (376)
T ss_pred             HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-----------CceEEEE---eCCCCCccCHHHHHHHHHHCCCE
Confidence            9998888889998887643      67778777642           3456653   34679999999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc--CcccEEEec-HHHHHHHHhh---CCc--------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG--SVGGFCVGS-SYIIEHHRLS---GSG--------  313 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg--~~gG~v~~~-~~~~~~~~~~---~~~--------  313 (457)
                      +|+|++|++|.. ..|+.    .|.   -.|+.+.||+  |.+.  +.||+++.+ +++.+.++..   +..        
T Consensus       149 vIeDaa~~~g~~-~~~~~----~g~---~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~  220 (376)
T TIGR02379       149 VIEDAAQGVMST-YKGRA----LGS---IGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGE  220 (376)
T ss_pred             EEEECccccCCc-cCCcc----cCC---CCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccC
Confidence            999999998752 11211    111   1145555553  6563  367876665 7777776532   100        


Q ss_pred             --------ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCC---CCeEEEEe
Q psy15447        314 --------YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRD---TPLKYLYL  380 (457)
Q Consensus       314 --------~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~---~~~~~i~~  380 (457)
                              ..+...++.+.++.+++.|+.+++   ..++-+++.++..+.|+.+.......+..  +..   ..++++.+
T Consensus       221 ~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~---~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  297 (376)
T TIGR02379       221 VDKYTWRDIGSSYLPSELQAAYLWAQLEQADR---INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKL  297 (376)
T ss_pred             CCcceeeeecccCCccHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEE
Confidence                    112223567777777777777655   45566666777777776521001122211  111   12445555


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------C---------CCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------K---------QKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------~---------~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      ....       ...++.+.|.++||..+....|....+        .         ....+.+.++..+|++|+++++++
T Consensus       298 ~~~~-------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~  370 (376)
T TIGR02379       298 KDED-------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQT  370 (376)
T ss_pred             CCcC-------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHH
Confidence            4322       346899999999998764332322111        0         034688888888999999999999


Q ss_pred             HHHHH
Q psy15447        444 LCKSH  448 (457)
Q Consensus       444 l~~~~  448 (457)
                      |++++
T Consensus       371 i~~~~  375 (376)
T TIGR02379       371 ICDYL  375 (376)
T ss_pred             HHHHh
Confidence            98864

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.90  E-value=1.1e-20  Score=186.83  Aligned_cols=316  Identities=17%  Similarity=0.151  Sum_probs=216.6

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      ++-.+++.+.++....         ...+...++++.+++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus        10 ~~~~~~v~~~~~~~~~---------~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~   80 (380)
T TIGR03588        10 QDDIDAVVEVLKSDFL---------TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFV   80 (380)
T ss_pred             HHHHHHHHHHHhcCCc---------cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchH
Confidence            4456777777765211         123456889999999999999999999999999999988 789999999999999


Q ss_pred             HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...+...|.+++.++.      .|++++++.+++..       .+++++|+..   +++|...++++|.++|++||++
T Consensus        81 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~-------~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~  150 (380)
T TIGR03588        81 ATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAK-------GKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLK  150 (380)
T ss_pred             HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhccc-------CCCceEEEEe---CCCCccCCHHHHHHHHHHcCCE
Confidence            998888889998887754      37889998886421       1234566543   3568899999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEe-cHHHHHHHHhh---CCc---------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVG-SSYIIEHHRLS---GSG---------  313 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~-~~~~~~~~~~~---~~~---------  313 (457)
                      +|+|++|++|.. -.+.    ..|.. ...|+.+.|++  |.++ +.||+++. ++++.+.++..   +..         
T Consensus       151 lI~D~a~a~g~~-~~~~----~~g~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  224 (380)
T TIGR03588       151 IIEDASHALGAE-YGGK----PVGNC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQ  224 (380)
T ss_pred             EEEECCCcccCc-cCCE----eCCCc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCccccccc
Confidence            999999998743 1111    11210 12378888987  8885 45776665 46666655421   100         


Q ss_pred             ----c-------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEE
Q psy15447        314 ----Y-------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKY  377 (457)
Q Consensus       314 ----~-------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~  377 (457)
                          +       .+...++.+.++.+++.|+.+   ++..++-+++.+++.+.|+.   ++++.+..+. .    .....
T Consensus       225 ~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l---~~~~~~r~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~  298 (380)
T TIGR03588       225 DEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL---DRFVAKRREIAARYDRLLKD---LPYFTPLTIPLGSKSAWHLYP  298 (380)
T ss_pred             ccCcceeeeeccccccCccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcC---CCCccCCCCCCCCEeEEEEEE
Confidence                0       112235777777777766655   34678888899999999988   4444432221 1    12333


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-------CC---------CCCeEEEEecCCCCHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-------KK---------QKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-------~~---------~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      +.+.....     ....++.+.|.++||.++....|....       ..         ....+++.++...|++|+++++
T Consensus       299 i~~~~~~~-----~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~  373 (380)
T TIGR03588       299 ILLDQEFG-----CTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVV  373 (380)
T ss_pred             EEECCcCC-----CCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHH
Confidence            44432100     035678999999999887543332100       00         0256899899999999999999


Q ss_pred             HHHHHHH
Q psy15447        442 ETLCKSH  448 (457)
Q Consensus       442 ~~l~~~~  448 (457)
                      ++|++++
T Consensus       374 ~~l~~~~  380 (380)
T TIGR03588       374 ETLRKVL  380 (380)
T ss_pred             HHHHHhC
Confidence            9998763

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.90  E-value=2e-20  Score=184.32  Aligned_cols=312  Identities=11%  Similarity=0.088  Sum_probs=212.1

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      ++-.+++.+.+.. +.       .+|..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.++|.
T Consensus        11 ~~~~~~~~~~l~~-~~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~   82 (375)
T PRK11706         11 GTELDYIQQAMSS-GK-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV   82 (375)
T ss_pred             HHHHHHHHHHHHc-CC-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcH
Confidence            3446667766654 21       23456778999999999999999999999999998877655 689999999999999


Q ss_pred             HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...+...|.+++.++.      .|++++++.+.+           ++++|++.   +++|...++++|.++|++||++
T Consensus        83 ~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-----------~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~  148 (375)
T PRK11706         83 STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-----------KTRAIVPV---HYAGVACEMDTIMALAKKHNLF  148 (375)
T ss_pred             HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-----------CCeEEEEe---CCCCCccCHHHHHHHHHHcCCE
Confidence            999999999999888763      368888887743           34555543   3579899999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEecHHHHHHHHhh---CCc---------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGSSYIIEHHRLS---GSG---------  313 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~~~~~~~~~~~---~~~---------  313 (457)
                      +|+|++|++|... .|+... .+      .|+.+.||+  |.++.  +|++++.++++.+.++..   +..         
T Consensus       149 vIeD~a~a~g~~~-~~~~~g-~~------~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  220 (375)
T PRK11706        149 VVEDAAQGVMSTY-KGRALG-TI------GHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQV  220 (375)
T ss_pred             EEEECcccccccc-CCeeee-cC------cCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCC
Confidence            9999999987531 122111 11      155555665  99953  344566667777654321   100         


Q ss_pred             -------ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec-cC----CCCeEEEEec
Q psy15447        314 -------YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-HR----DTPLKYLYLQ  381 (457)
Q Consensus       314 -------~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~~----~~~~~~i~~~  381 (457)
                             ..++..++.+.++.+++.++.+++   ..++-+++.+++.+.|+.+....++.+.. +.    ..+++++.+.
T Consensus       221 ~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~---~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (375)
T PRK11706        221 DKYTWVDIGSSYLPSELQAAYLWAQLEAADR---INQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR  297 (375)
T ss_pred             CcceeeecccccCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence                   012222467777777787777654   55667777888888887621101233221 11    1335666665


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------cc--C-C--------CCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------EA--K-K--------QKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------~~--~-~--------~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      ...       ...++.+.|.++||.++....|..      ..  . .        ....+.+.++...|++|+++++++|
T Consensus       298 ~~~-------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i  370 (375)
T PRK11706        298 DLE-------DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTI  370 (375)
T ss_pred             CcC-------CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHH
Confidence            433       456899999999998764322211      00  0 0        1345777778889999999999999


Q ss_pred             HHHH
Q psy15447        445 CKSH  448 (457)
Q Consensus       445 ~~~~  448 (457)
                      ++++
T Consensus       371 ~~~~  374 (375)
T PRK11706        371 LEFF  374 (375)
T ss_pred             HHHh
Confidence            8864

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=3.2e-21  Score=191.52  Aligned_cols=293  Identities=18%  Similarity=0.212  Sum_probs=198.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+.    ..|.++.+++.+|++++
T Consensus        57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l  136 (425)
T PRK06084         57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL  136 (425)
T ss_pred             CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence            45678999999999999999999999999999999999999999998887765554432    24667777888899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+++           ++++|++|+++||+|.+.++++|.++|++||+++|+|++++.+....   .      + ..++
T Consensus       137 e~ai~~-----------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~---p------~-~~ga  195 (425)
T PRK06084        137 EALIDE-----------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCR---P------F-EHGA  195 (425)
T ss_pred             HHHhcc-----------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---h------h-hcCC
Confidence            998853           45788899999999999999999999999999999999998654321   1      1 1245


Q ss_pred             cEEEecCcccccCc----ccEEEecHHH--HHH----------------------------H-H-hhCCcceecCCCcHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSYI--IEH----------------------------H-R-LSGSGYCFSASLPPF  323 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~~--~~~----------------------------~-~-~~~~~~~~~~~~~~~  323 (457)
                      |+++.|++|.+|+.    ||+++.+...  .+.                            . . .......++..++|.
T Consensus       196 Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~  275 (425)
T PRK06084        196 DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPF  275 (425)
T ss_pred             CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHH
Confidence            89999999999753    5777654321  000                            0 0 000011345568999


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--------------cC-CCCeEEEEecCCcchHH
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--------------HR-DTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--------------~~-~~~~~~i~~~~~~~~~~  388 (457)
                      .|+.++..|+.+.   .++++..+++..+.+.|++++.+..+..++              .. .+.++.+.++++.    
T Consensus       276 ~a~l~lrgl~tl~---~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~----  348 (425)
T PRK06084        276 NAFLILQGLETLA---LRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQ----  348 (425)
T ss_pred             HHHHHHcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCH----
Confidence            8888877776554   478888999999999999854332222211              01 2557788876442    


Q ss_pred             HHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                        ....++.+.|.=-.+.++.+      .+|..            .....++.+||++.+.    |.+.+++-|+++++.
T Consensus       349 --~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE----d~~dLi~dl~~Al~~  422 (425)
T PRK06084        349 --AAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE----HIDDIIADLAQALDA  422 (425)
T ss_pred             --HHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence              13445666654111111111      11111            0112257899999864    455555555555544

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.90  E-value=9.6e-21  Score=186.10  Aligned_cols=292  Identities=14%  Similarity=0.129  Sum_probs=199.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.....+    ...+.++..++..|+++
T Consensus        50 ~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~  129 (386)
T PRK08045         50 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA  129 (386)
T ss_pred             CCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence            35667899999999999888999999999999999999999999999999887644322    22344666677678888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+....   .    ..   ..
T Consensus       130 l~~~l~~-----------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~---p----l~---~g  188 (386)
T PRK08045        130 LRAALAE-----------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQN---P----LA---LG  188 (386)
T ss_pred             HHHhccc-----------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---c----hh---hC
Confidence            8887743           45789999999999999999999999999999999999987553211   1    11   24


Q ss_pred             ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+++    .+|++++ ++++++.++...  ...+..++|+.+..++..|+.+.   .++++..+++..+.
T Consensus       189 aDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~--~~~g~~~~p~~~~l~~rgl~tl~---~R~~~~~~na~~la  263 (386)
T PRK08045        189 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA--NNIGVTGGAFDSYLLLRGLRTLV---PRMELAQRNAQAIV  263 (386)
T ss_pred             CCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHH--HhcCCCCCHHHHHHHHhhhccHH---HHHHHHHHHHHHHH
Confidence            58999999999963    2466655 577776665322  23344578888888888876553   37788999999999


Q ss_pred             HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447        354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~  413 (457)
                      +.|++++.+..+..++-              ..+.++.+.++++.      ....++.+.|.=-.+.++.+.      +|
T Consensus       264 ~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~~  337 (386)
T PRK08045        264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE------QTLRRFLGGLSLFTLAESLGGVESLISHA  337 (386)
T ss_pred             HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcH------HHHHHHHHhccceeEeccCCCCceeEeCC
Confidence            99998443222222111              12567888886432      134566666542121111111      11


Q ss_pred             cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ..            .....++.+|+++.+...++-++.+.++|++
T Consensus       338 ~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~  382 (386)
T PRK08045        338 ATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA  382 (386)
T ss_pred             CCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHH
Confidence            11            0112257899999875544444444444443

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=4.7e-21  Score=189.04  Aligned_cols=288  Identities=15%  Similarity=0.184  Sum_probs=200.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++++|++.|.+.+++++||+.|+..++. +.++||.|++..+.|+++..    .+...|.++..++..|+++
T Consensus        52 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~  130 (390)
T PRK08064         52 GNPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEE  130 (390)
T ss_pred             CChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence            356778999999999999889999999999988886 77899999999888875442    3455788999998888888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+.           +++++|+++++.||+|.+.|+++|.++|+++|+++|+|++|+.+....         .+. .+
T Consensus       131 l~~~l~-----------~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------~~~-~g  189 (390)
T PRK08064        131 VAQNIK-----------PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK---------PLD-LG  189 (390)
T ss_pred             HHHhcC-----------CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC---------chh-hC
Confidence            887774           346899999999999999999999999999999999999987543211         111 24


Q ss_pred             ccEEEecCcccccCc----ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+++.    +|+++. ++++++.++....  .++...+|..++..+..++.+   +.++++..++...+.
T Consensus       190 ~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--~~g~~~~~~~a~l~~~gl~tl---~~R~~~~~~~a~~la  264 (390)
T PRK08064        190 ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--SFGAVLGVQDCWLVLRGLKTL---HVRLEHSSETANKIA  264 (390)
T ss_pred             CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcH---HHHHHHHHHHHHHHH
Confidence            589999999999632    476555 4677777764432  244455777666655444333   347788888888898


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe---eEeccc-----
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AITCPS-----  411 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~v~~~~-----  411 (457)
                      +.|++++.+..+...+              ...+.++.+.+++..       ...++.+.   .++   .++.+.     
T Consensus       265 ~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~-------~~~~f~~~---l~l~~~~~s~G~~~sl~  334 (390)
T PRK08064        265 LYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEE-------AVRQFVSH---VKLPVFAVSLGAVESIL  334 (390)
T ss_pred             HHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHH-------HHHHHHHh---CCcceEcccCCCCccee
Confidence            8888754322111111              123567888875321       33334333   344   222221     


Q ss_pred             -cC------cc------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        412 -HL------DQ------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       412 -~~------~~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                       +|      ..      .....++.+|+++.+..+++.++.+.++|+++
T Consensus       335 ~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~  383 (390)
T PRK08064        335 SYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV  383 (390)
T ss_pred             ECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence             11      00      00122578999999988888888888888763

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.90  E-value=6.9e-21  Score=188.97  Aligned_cols=294  Identities=14%  Similarity=0.147  Sum_probs=197.0

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEec-CCCHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFK-HNNMQ  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~-~~d~~  197 (457)
                      .++...+|+++++++.|.+.+++++||+.|+..++.+++++||.|++....|+.+...    +...|.++..++ ..|++
T Consensus        67 ~~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e  146 (436)
T PRK07812         67 MNPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLD  146 (436)
T ss_pred             CCchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHH
Confidence            3567889999999999999999999999999999999999999999998888776543    233567777774 45677


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.++           +++++|++|++.||+|.+.|+++|.++|++||+++|+|++++.+....         .+ ..
T Consensus       147 ~l~~ai~-----------~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~---------pl-~~  205 (436)
T PRK07812        147 AWRAAVR-----------PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIR---------PL-EH  205 (436)
T ss_pred             HHHHhCC-----------CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hc
Confidence            7777664           356899999999999999999999999999999999999987653321         11 13


Q ss_pred             CccEEEecCcccccCcc----cEEEecHH------------------------------HHHHHHhhCCcceecCCCcHH
Q psy15447        278 EVDMIIGSLEHALGSVG----GFCVGSSY------------------------------IIEHHRLSGSGYCFSASLPPF  323 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~g----G~v~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~  323 (457)
                      ++|+++.|++|.+|+.|    |.++.+..                              ++...+... ....+..++|.
T Consensus       206 GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~l~p~  284 (436)
T PRK07812        206 GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQL-LRDLGSAISPF  284 (436)
T ss_pred             CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHH-HHhcCCCCCHH
Confidence            56899999999997654    44554321                              000111000 11234567888


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchHH
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~~  388 (457)
                      .|+..+..|+-+.   .++++..+++..+.+.|++++.+..+..++               ...+.++.+.++++.    
T Consensus       285 ~a~l~~rgl~tL~---~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~----  357 (436)
T PRK07812        285 NAFLIAQGLETLS---LRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGV----  357 (436)
T ss_pred             HHHHHhcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH----
Confidence            8887777765553   478889999999999999854333232211               112567888876432    


Q ss_pred             HHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                        ..+.++.+.|.=-.+....+      .+|..            .....++.+||++.+..    .+.+++-|+++++.
T Consensus       358 --~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGlEd----~~dli~dl~~Al~~  431 (436)
T PRK07812        358 --EAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGIEG----IDDILADLEAGFAA  431 (436)
T ss_pred             --HHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHHh
Confidence              13556666654212211111      11111            01123568999998743    44445555555544


Q ss_pred             h
Q psy15447        451 A  451 (457)
Q Consensus       451 ~  451 (457)
                      +
T Consensus       432 ~  432 (436)
T PRK07812        432 A  432 (436)
T ss_pred             h
Confidence            3

>PRK05939 hypothetical protein; Provisional

Probab=99.89  E-value=6.7e-21  Score=187.75  Aligned_cols=247  Identities=16%  Similarity=0.155  Sum_probs=178.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHH---HHHHHHhcCCeEEEecCCCHHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA---IQTGLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~---~~~~~~~~g~~~~~~~~~d~~~l  199 (457)
                      .++...+||++++++.|.+.++.++||+.|+..++.+++++||.|++....|++   .+..+...|.++..++..|++++
T Consensus        45 g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l  124 (397)
T PRK05939         45 GTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNV  124 (397)
T ss_pred             CCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHH
Confidence            357789999999999999999999999999999999999999999999887754   33456667899999998899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.           +++++|++++++|++|.+.|+++|.++|++||+++|+|++++.+..          ++....++
T Consensus       125 ~~~l~-----------~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----------~~~~~~ga  183 (397)
T PRK05939        125 AAAIR-----------PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----------FRPKDVGA  183 (397)
T ss_pred             HHhCC-----------CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----------cCccccCC
Confidence            98874           3567999999999999999999999999999999999999864321          11111356


Q ss_pred             cEEEecCcccccCcc----cEEEecHH--------H-------------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSVG----GFCVGSSY--------I-------------IEHHRLSGSGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       280 Di~~~s~sK~lg~~g----G~v~~~~~--------~-------------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      |+++.|++|.+++.|    |+++.+..        +             +..++... ...++..++|..+...+..++-
T Consensus       184 Divv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~p~~a~l~~rgl~t  262 (397)
T PRK05939        184 SLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKG-LRDMGATLSSEAAHRIAIGAET  262 (397)
T ss_pred             EEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHH-HHhcCCCCCHHHHHHHHcCcCc
Confidence            999999999997544    44442221        1             11111111 1134556788888777766655


Q ss_pred             HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447        335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMC  400 (457)
Q Consensus       335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  400 (457)
                      +.   .++++..+++..+.+.|++++.+..+..++              ...+.++.+.+++..       ...++.+.|
T Consensus       263 l~---~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~-------~~~~f~~~l  332 (397)
T PRK05939        263 LA---LRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGI-------DCFDFLNRL  332 (397)
T ss_pred             HH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHH-------HHHHHHHhC
Confidence            53   367888889999999998855433332222              122567778776432       344566555


Q ss_pred             H
Q psy15447        401 I  401 (457)
Q Consensus       401 ~  401 (457)
                      .
T Consensus       333 ~  333 (397)
T PRK05939        333 K  333 (397)
T ss_pred             C
Confidence            3

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=8.5e-21  Score=185.29  Aligned_cols=295  Identities=13%  Similarity=0.109  Sum_probs=203.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....|++.++.+.+.+.+++++||++|+..++.++.++||.|++..+.|+++..    .+...|.++..++..+.+.
T Consensus        62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~  141 (395)
T PRK05967         62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG  141 (395)
T ss_pred             CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence            467889999999999988889999999999999999999999999999998887653    3466788888887777777


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++|++.||++.+.|+++|+++|+++|+++|+|++++.+.+-+         .+ ..+
T Consensus       142 l~~al~-----------~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~~---------pl-~~G  200 (395)
T PRK05967        142 IAKLMR-----------PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYFR---------PL-DFG  200 (395)
T ss_pred             HHHhcC-----------cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceecC---------hh-HcC
Confidence            887774           356899999999999999999999999999999999999987543211         11 135


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +||++.|++|.+++    .+|+++++++..+.+....  ...+..++|..|...+..++-+.   .++++..+++..+.+
T Consensus       201 aDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~--~~~G~~~~p~da~l~~rgl~Tl~---lR~~~~~~na~~lA~  275 (395)
T PRK05967        201 VDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAH--GTLGLCAGPDDTYQILRGLRTMG---IRLEHHRKSALEIAR  275 (395)
T ss_pred             CCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHH--HHcCCCCCHHHHHHHHcCcccHH---HHHHHHHHHHHHHHH
Confidence            68999999999964    2477777877666554221  23456689998888877766553   377888899999999


Q ss_pred             HhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447        355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD  414 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~  414 (457)
                      .|++++.+..+..++-              ..+.++.+.++.+...  ....+.++.+.|.=-.+.++.+..      +.
T Consensus       276 ~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~--~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~  353 (395)
T PRK05967        276 WLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEK--GKAKAHAFLDALEIFGLGYSWGGYESLALHVK  353 (395)
T ss_pred             HHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcc--cHHHHHHHHHhCCcceEccCCCCcceeeeeCC
Confidence            9988544333322210              1256788888633000  001445666665421111111111      00


Q ss_pred             c------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        415 Q------EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       415 ~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .      .....++.+||++.+...++=++.+.++|+
T Consensus       354 ~~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~  390 (395)
T PRK05967        354 LGDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFA  390 (395)
T ss_pred             CChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence            0      001224689999987554444444444443

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.89  E-value=1.1e-20  Score=185.68  Aligned_cols=291  Identities=14%  Similarity=0.155  Sum_probs=199.7

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++.++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+    ...+.++..++..|+++
T Consensus        49 ~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~  128 (382)
T TIGR02080        49 GNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA  128 (382)
T ss_pred             CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence            35668899999999999888999999999999999999999999999999988654322    23346666666678888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++||+|.+.|+++|.++|+++|+++|+||+|..+....         .+. .+
T Consensus       129 l~~ai~~-----------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------pl~-~g  187 (382)
T TIGR02080       129 LRAALAQ-----------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN---------PLA-LG  187 (382)
T ss_pred             HHHhcCc-----------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC---------chh-hC
Confidence            8887743           45799999999999999999999999999999999999987553211         111 23


Q ss_pred             ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|++++|++|.+++    .+|+++. ++++.+.++...  ...+..++|+.++.++..++.+.   .++++..+++..+.
T Consensus       188 aDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~--~~~g~~~sp~~a~l~lr~l~tl~---~R~~~~~~na~~~a  262 (382)
T TIGR02080       188 ADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA--NNLGVTGGAFDSYLTLRGLRTLV---ARMRLQQRNAQAIV  262 (382)
T ss_pred             CCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH--HccCCCCCHHHHHHHHcccchHH---HHHHHHHHHHHHHH
Confidence            48999999999964    3577655 677777665332  23355679999888877776554   35778889999999


Q ss_pred             HHhhcccccCCeEEec--------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cC
Q psy15447        354 SLLSQHKVTQRFLVQG--------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~  413 (457)
                      +.|++++.+..+..++              ...+.++.+.++++.      ....++.+.|.=-++.++.++      +|
T Consensus       263 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~------~~~~~f~~~l~~~~~~~s~G~~~sl~~~p  336 (382)
T TIGR02080       263 EYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGE------QTVRRFLGGLSLFTLAESLGGVESLIAHP  336 (382)
T ss_pred             HHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcH------HHHHHHHHcCCcceEeccCCCCcceeECC
Confidence            9998744322222211              012568888886432      133456655542122222111      11


Q ss_pred             cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..            .....++.+||++.+.    |.+.+++-|+++++
T Consensus       337 ~~~~~~~~~~~~~~~~gi~~~liRlsvGlE----~~~dl~~dl~~al~  380 (382)
T TIGR02080       337 ATMTHAAMGPEARAEAGISDTLLRLSVGLE----DADDLIADLEQGLR  380 (382)
T ss_pred             CccCcccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHHHHHh
Confidence            11            0111256899999864    45555555555554

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.89  E-value=3.8e-20  Score=182.39  Aligned_cols=312  Identities=13%  Similarity=0.094  Sum_probs=209.1

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      ++-.+++.+.+.. +...        ..+...+||+++++++|.+.+++++||++|+..++.++ .++||.|++..+.|.
T Consensus        14 ~~e~~~~~~~l~~-~~~~--------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~   84 (379)
T PRK11658         14 DEELAAVKEVLRS-GWIT--------TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV   84 (379)
T ss_pred             HHHHHHHHHHHHc-CCcc--------CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence            4556777777754 2111        23457899999999999999999999999999999998 799999999999999


Q ss_pred             HHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...+...|.+++.++.      .|++++++.+.+           ++++|+..   +++|...++++|.++|++||++
T Consensus        85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-----------~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~  150 (379)
T PRK11658         85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-----------RTKAIIPV---HYAGAPADLDAIRAIGERYGIP  150 (379)
T ss_pred             HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-----------CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCe
Confidence            998888889999887763      267888887743           34566532   3579999999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-HHHHHHHHhhC-Ccc------------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-SYIIEHHRLSG-SGY------------  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~~~~~~~~~~~-~~~------------  314 (457)
                      +|+|++|++|..- .|...    +  ....++...+-+|.+. +.||+++++ +++.+.++... ++.            
T Consensus       151 vi~D~a~a~g~~~-~~~~~----g--~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  223 (379)
T PRK11658        151 VIEDAAHAVGTYY-KGRHI----G--ARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGR  223 (379)
T ss_pred             EEEECCCccCCeE-CCeec----C--CCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccC
Confidence            9999999977532 12111    1  1122444334457773 467877764 67766654311 010            


Q ss_pred             ---------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEe
Q psy15447        315 ---------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYL  380 (457)
Q Consensus       315 ---------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~  380 (457)
                               .+...++.+.+|.++..++.++   +..++-+++.+++.+.|++   ++...+..+..     ..++.+.+
T Consensus       224 ~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~---~~~~~r~~~a~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~  297 (379)
T PRK11658        224 APQAEVLTPGYKYNLADINAAIALVQLAKLE---ALNARRREIAARYLQALAD---LPFQPLSLPAWPHQHAWHLFIIRV  297 (379)
T ss_pred             CCcceeeccccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcC---CCCccCcCCCCCCceeEEEEEEEE
Confidence                     0112356677777777766554   3667788888889899887   22222211111     12344444


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc------------CC----CCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA------------KK----QKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~------------~~----~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      .....    .....++.+.|.++||.++....|....            +.    ....+.+..+...|++|+++++++|
T Consensus       298 ~~~~~----~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i  373 (379)
T PRK11658        298 DEERC----GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL  373 (379)
T ss_pred             CCccc----cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence            32100    0034579999999998866432222100            00    1345777778889999999999999


Q ss_pred             HHHH
Q psy15447        445 CKSH  448 (457)
Q Consensus       445 ~~~~  448 (457)
                      +++.
T Consensus       374 ~~~~  377 (379)
T PRK11658        374 QQIA  377 (379)
T ss_pred             HHHH
Confidence            9875

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.89  E-value=1.1e-20  Score=189.95  Aligned_cols=339  Identities=13%  Similarity=0.040  Sum_probs=204.4

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHh-hc-C---C--C-cEEEecccHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS-FM-G---L--E-ETALYSFGFS  151 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~-~~-g---~--~-~~i~~~sG~~  151 (457)
                      +.++|++-+.+ ++..++.+.+ +.+.+.  +..   +....|..+..+++.+.+.+ .. +   .  + ++++++++++
T Consensus       100 ~~~i~l~~g~p-~~~~~~~v~e-~~~~~~--~~~---Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~  172 (527)
T PRK09275        100 RDAVSYVRDQL-GFDADEFVYE-LVDGII--GDN---YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA  172 (527)
T ss_pred             HHHHhhcCCCC-CCCCCHHHHH-HHHHHh--cCC---CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence            45667766544 7766666777 445553  222   22334556666666553332 21 2   1  2 4555666678


Q ss_pred             HHHHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhcC--CeEEEecC-------CCHHHHHHHHHhhchhcccCCCCc
Q psy15447        152 TSASAIAA-----YVKRNDAVFVDENINFAIQTGLIASR--CKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       152 a~~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~g--~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      |+..++.+     ++++||.|++..++|..+...+.+.+  ..++.++.       .|++++++++.           ++
T Consensus       173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-----------~~  241 (527)
T PRK09275        173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-----------PS  241 (527)
T ss_pred             HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-----------CC
Confidence            88888775     68999999999999999888877765  44444431       25677776543           35


Q ss_pred             cEEEEEecCCCCCCCCCC---hHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC
Q psy15447        218 KKFIIVEGVYMNSADICP---LKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      +++|++.+++||+|.+.+   +++|+++|++  +++++|.||+|+.... . ...+..   ..|++ .|++.||||.+|+
T Consensus       242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~-~-~~s~~~---~~~~~-~I~v~SfSK~f~m  315 (527)
T PRK09275        242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD-D-FRSLFA---VLPYN-TILVYSFSKYFGA  315 (527)
T ss_pred             CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc-c-ccCHHH---hCCCC-EEEEeehhhhccC
Confidence            677777789999999998   7788889964  5999999999975332 1 111111   12333 4889999999987


Q ss_pred             cc---cEEEecHH-----HHHHH--------------------------------HhhCCcceecCCCcHHHHHHHHHH-
Q psy15447        293 VG---GFCVGSSY-----IIEHH--------------------------------RLSGSGYCFSASLPPFLAVAANKA-  331 (457)
Q Consensus       293 ~g---G~v~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~aaa~a~-  331 (457)
                      +|   ||++++++     +++.+                                +.... +...+...|...+.++.+ 
T Consensus       316 tG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~-~~t~~~s~p~Q~a~al~~~  394 (527)
T PRK09275        316 TGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVAL-NHTAGLSTPQQVQMALFSL  394 (527)
T ss_pred             cHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHH-hhccCCCCHHHHHHHHHHH
Confidence            76   99998875     33222                                11111 111222234433323211 


Q ss_pred             HHHHhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc----chHHH-----HHHHHHHHH
Q psy15447        332 LHLLKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD----DEVAS-----KKLLQTICD  398 (457)
Q Consensus       332 l~~~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~-----~~~~~~~~~  398 (457)
                      ...++..    ++.++.++++.+.+.+.|..     ++....+.++..+++.+..-.    ..+..     .....+++.
T Consensus       395 ~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg~-----~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~  469 (527)
T PRK09275        395 FALLDEEDAYKKAMKDIIRRRYKALYEGLGL-----PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLF  469 (527)
T ss_pred             HHHHhCchHHHHHHHHHHHHHHHHHHHHcCC-----CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHH
Confidence            1112222    23566777777777666621     222222334455555543210    00000     002456777


Q ss_pred             HHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        399 MCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       399 ~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +|+++ ||.+.|+..+.    ...+++|+++.. .+++++.++.+.|++++++...
T Consensus       470 ~Ll~e~gV~v~PG~~Fg----~~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~~  520 (527)
T PRK09275        470 RLAEETGVVLLPGGGFG----GPEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYYE  520 (527)
T ss_pred             HHHhcCCEEEeCchhhC----CCCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHHH
Confidence            87765 99999887542    235689999953 5889999999999999876643

>PRK08637 hypothetical protein; Provisional

Probab=99.89  E-value=4.6e-20  Score=182.85  Aligned_cols=328  Identities=11%  Similarity=0.024  Sum_probs=202.7

Q ss_pred             hhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcC---C---CcEEEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447         97 PDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMG---L---EETALYSFGFSTSASAIAAYVKRNDAVFV  169 (457)
Q Consensus        97 p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g---~---~~~i~~~sG~~a~~~ai~a~~~~gd~v~~  169 (457)
                      |-+.+++.+.+++.. ....++....|..++...+.+.+.+..+   .   +.+++++++++++..++.+++++||.|++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv   98 (388)
T PRK08637         19 PMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL   98 (388)
T ss_pred             cchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEE
Confidence            345555555555421 1111223345555566555555544322   1   23355556668999999999999999999


Q ss_pred             eCcccHHHHHHHH-hcCCeEEEecC--C----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHH
Q psy15447        170 DENINFAIQTGLI-ASRCKVQYFKH--N----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDI  239 (457)
Q Consensus       170 ~~~~h~~~~~~~~-~~g~~~~~~~~--~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i  239 (457)
                      +.++|..+...+. ..|.+++.++.  .    |++++++.++...       .+.++++++.+++||||.+.+   +++|
T Consensus        99 ~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~-------~~~~~~~~~~~P~NPTG~~~s~~~~~~l  171 (388)
T PRK08637         99 PDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAY-------NKGKVIVILNFPNNPTGYTPTEKEATAI  171 (388)
T ss_pred             cCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhc-------cCCCEEEEEeCCCCCCCCCCCHHHHHHH
Confidence            9999988877654 57888887654  2    5788888776211       134567888889999999988   5677


Q ss_pred             HHHHHH-----cCcEEEEEcCcccccccCCCC-ccc-cccCCCCCCc-cEEEecCcccccCcc---cEEEe------cHH
Q psy15447        240 LSLRSK-----YQARIFVDESVSFGTLGSTGH-GVT-EYFGVSTEEV-DMIIGSLEHALGSVG---GFCVG------SSY  302 (457)
Q Consensus       240 ~~l~~~-----~g~~li~DEa~~~g~~g~~g~-~~~-~~~~~~~~~~-Di~~~s~sK~lg~~g---G~v~~------~~~  302 (457)
                      +++|++     |++++|+||+|....+..... .+. ...+.. +++ -+.++|+||.++.+|   ||++.      +++
T Consensus       172 ~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~  250 (388)
T PRK08637        172 VEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLH-SNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQT  250 (388)
T ss_pred             HHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhccc-ccceEEEeccccccCCCcccceEEEEEccccCCcHH
Confidence            777765     999999999987544432111 111 111211 222 234569999987655   99874      367


Q ss_pred             HHHHHHhhC---CcceecCCCcHHHHHHHHHHHHH---HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        303 IIEHHRLSG---SGYCFSASLPPFLAVAANKALHL---LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       303 ~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~---~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      +++.+....   ..... .+.+.+..+++.+.++.   .+...+.+..++++.+.+.+.|+......++.+..+..+.++
T Consensus       251 l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~  329 (388)
T PRK08637        251 VKEALEKKVKGLIRSNI-SNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFM  329 (388)
T ss_pred             HHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEE
Confidence            776664321   00111 13356666666555521   111122344566666677777765211124555544556777


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |+.++. .       ...++++.|+ ++||.+...         ..+++|++++. .++++++++++.|.++++.+
T Consensus       330 ~~~l~~-~-------~~~~l~~~l~~~~gv~~~~~---------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        330 CLKLKG-V-------DAEELRVHLLEKYGIGTIAL---------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             EecCCh-H-------HHHHHHHHHhhhcceEEEec---------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence            877752 2       4567888886 569987632         24689999976 78999999999999888754

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.89  E-value=5.8e-20  Score=181.90  Aligned_cols=329  Identities=12%  Similarity=0.051  Sum_probs=222.2

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEE--ecccHHHHHHHHHhhcC------
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETAL--YSFGFSTSASAIAAYVK------  162 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~--~~sG~~a~~~ai~a~~~------  162 (457)
                      .+|++.+++.+.+.+....+...   ....+..++..+.+++++|.+    +..+  +++|++||..++.+...      
T Consensus        53 ~~p~~~~~~~~~l~~~~~np~s~---~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~  129 (431)
T TIGR01788        53 MEPEARKLMDETINKNMIDKDEY---PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRM  129 (431)
T ss_pred             CCHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHH
Confidence            47888898888887532222111   223477788889999999965    3444  58899999988865431      


Q ss_pred             --C-----CCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        163 --R-----NDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       163 --~-----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                        .     +..|+++...|.+..++++..|.++..++.+      |+++|++.|.+           .+.+|++..+++.
T Consensus       130 ~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-----------~t~lV~~t~g~t~  198 (431)
T TIGR01788       130 EAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE-----------NTIGVVCILGTTY  198 (431)
T ss_pred             HhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh-----------CCeEEEEEeCCCC
Confidence              1     2378999999999999998888777665532      68888888864           3578888899999


Q ss_pred             CCCCCChHHHHHHHHHc------CcEEEEEcCcccccc----cCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEE
Q psy15447        230 SADICPLKDILSLRSKY------QARIFVDESVSFGTL----GSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFC  297 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~----g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v  297 (457)
                      +|.+.|+++|.++|++|      |+++++|.+|+.+..    ++..      +.....++|.+..|.||.+ |+.| |++
T Consensus       199 tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~------~~~~~~~~DSis~s~HK~~~~P~g~G~l  272 (431)
T TIGR01788       199 TGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE------WDFRLPRVKSINVSGHKYGLVYPGVGWV  272 (431)
T ss_pred             CcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch------hhcCCCCceEEEECchhccCCCCCcEEE
Confidence            99999999999999999      999999999985442    2211      1112346789999999987 6655 776


Q ss_pred             EecHH--HHHHHHhh----C---CcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447        298 VGSSY--IIEHHRLS----G---SGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFL  366 (457)
Q Consensus       298 ~~~~~--~~~~~~~~----~---~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~  366 (457)
                      +.++.  +.+.+...    .   ..++...+-+...+...-..+..+..  ..+..++..++++++.+.|++   .++++
T Consensus       273 ~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~---~~~~e  349 (431)
T TIGR01788       273 IWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAK---LGPFE  349 (431)
T ss_pred             EEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHh---CCCEE
Confidence            65543  22322110    0   00111111111111222233333322  245678888999999999988   57788


Q ss_pred             Eecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        367 VQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       367 ~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      +..+ +..+++.+.+....+.   .....++.+.|.++|+.+....-|..  ..+.-.+|+++...++++.++++++.|+
T Consensus       350 l~~~~~~~~iV~Fr~~~~~~~---~~~~~~l~~~L~~~G~~~~~~~~p~~--~~~~~~lR~~~~~~~~~~~~~~~~~~~~  424 (431)
T TIGR01788       350 IISDGSGIPLVAFKLKDDADP---GYTLYDLSHRLRERGWIVPAYTLPKN--AEDIVVMRIVVREGFSRDLAELLIEDIE  424 (431)
T ss_pred             EeeCCCCceEEEEEeCCCCCC---CcCHHHHHHHHHHCCCcccCCCCCCc--cCCeEEEEEEecCCCCHHHHHHHHHHHH
Confidence            8765 5678888887642100   01456789999999987644332211  1223468999988899999999999999


Q ss_pred             HHHHHh
Q psy15447        446 KSHDIA  451 (457)
Q Consensus       446 ~~~~~~  451 (457)
                      +++..+
T Consensus       425 ~~~~~~  430 (431)
T TIGR01788       425 AALAYL  430 (431)
T ss_pred             HHHHhh
Confidence            988765

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.89  E-value=1e-20  Score=188.42  Aligned_cols=214  Identities=14%  Similarity=0.185  Sum_probs=164.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+|+++++++.|.+.+++++||++|+..++.+++++||.|++....|++....    +...|.++.+++.+|++++
T Consensus        62 ~p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l  141 (427)
T PRK05994         62 NPTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASF  141 (427)
T ss_pred             CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence            456788999999999999999999999999999999999999999998888765433    4567889999988899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.+.+           ++++|++|+++||+|.+.|+++|.++|++||+++|+|++++.+....         .+ ..++
T Consensus       142 ~~ai~~-----------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---------pl-~~ga  200 (427)
T PRK05994        142 ERAITP-----------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIR---------PI-EHGA  200 (427)
T ss_pred             HHhcCc-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCC---------cc-ccCC
Confidence            888742           46799999999999999999999999999999999999987543211         11 1356


Q ss_pred             cEEEecCcccccCc----ccEEEecHH-----------------------HHHHHH-------h-hCCcceecCCCcHHH
Q psy15447        280 DMIIGSLEHALGSV----GGFCVGSSY-----------------------IIEHHR-------L-SGSGYCFSASLPPFL  324 (457)
Q Consensus       280 Di~~~s~sK~lg~~----gG~v~~~~~-----------------------~~~~~~-------~-~~~~~~~~~~~~~~~  324 (457)
                      |+++.|++|.+|+.    ||+++....                       +.+.+.       . .......+..++|+.
T Consensus       201 Divv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~  280 (427)
T PRK05994        201 DIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFN  280 (427)
T ss_pred             cEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHH
Confidence            89999999999753    465553211                       111100       0 000113455689999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      |+.++..|+.+.   .++++.++++.++.+.|++++.
T Consensus       281 A~l~~~~l~tL~---~r~~~~~~~a~~la~~L~~~p~  314 (427)
T PRK05994        281 AFLILTGIETLP---LRMQRHSDNALAVAEWLKGHPK  314 (427)
T ss_pred             HHHHHcCcccHH---HHHHHHHHHHHHHHHHHHhCCC
Confidence            888888776664   3778888999999999988543

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.89  E-value=9.2e-21  Score=184.77  Aligned_cols=229  Identities=13%  Similarity=0.107  Sum_probs=169.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcC--CeEEEecCCCHHHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR--CKVQYFKHNNMQHLEE  201 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g--~~~~~~~~~d~~~le~  201 (457)
                      ++...+||+++|++.|.+.++.++||++|+..++. ++++||.|++....|+.....+....  ..+...-..|++++++
T Consensus        53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~  131 (364)
T PRK07269         53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIA  131 (364)
T ss_pred             CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHH
Confidence            45678999999999999999999999999998884 67999999998887776554332211  1121111257888888


Q ss_pred             HHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccE
Q psy15447        202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDM  281 (457)
Q Consensus       202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di  281 (457)
                      .++.           ++++|++|++.||+|.+.++++|+++|+++|+++|+|++++.+....         .+ ...+|+
T Consensus       132 ~i~~-----------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~---------pl-~~gaDi  190 (364)
T PRK07269        132 AIEE-----------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQR---------PI-ELGADI  190 (364)
T ss_pred             hcCc-----------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hhCCcE
Confidence            7753           56799999999999999999999999999999999999975433211         11 135689


Q ss_pred             EEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHh
Q psy15447        282 IIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       282 ~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L  356 (457)
                      ++.|++|.+++    .||++++ ++++.+.++...  ...+..++|+.++.++..|+.+.   .++++.++++..+.+.|
T Consensus       191 vv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~--~~~G~~~s~~~a~l~~~~L~tL~---~r~~~~~~na~~~a~~L  265 (364)
T PRK07269        191 VLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL--NTTGAVLSPFDSYLLMRGLKTLS---LRMERSTANAQEVVAFL  265 (364)
T ss_pred             EEecCceeccCCCcccceEEEeCcHHHHHHHHHHH--HHhCCCCCHHHHHHHHcCCCcHH---HHHHHHHHHHHHHHHHH
Confidence            99999999974    3688776 566766665321  12345579999998888876654   47788899999999999


Q ss_pred             hcccccCCeE-EeccCCCCeEEEEecC
Q psy15447        357 SQHKVTQRFL-VQGHRDTPLKYLYLQK  382 (457)
Q Consensus       357 ~~~~~~~~~~-~~~~~~~~~~~i~~~~  382 (457)
                      ++   .+++. +..++.+.++.+.+.+
T Consensus       266 ~~---~p~v~~v~ypg~gg~~sf~~~~  289 (364)
T PRK07269        266 KK---SPAVKEVLYTGKGGMISFKVAD  289 (364)
T ss_pred             Hh---CCCccEEeCCCcCcEEEEEECC
Confidence            88   34443 3325567788888763

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.89  E-value=2.5e-20  Score=188.36  Aligned_cols=290  Identities=16%  Similarity=0.155  Sum_probs=189.3

Q ss_pred             cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHHHHHHHh----cCCeEEEec
Q psy15447        120 FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAIQTGLIA----SRCKVQYFK  192 (457)
Q Consensus       120 ~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~  192 (457)
                      ..|..+...++.+.+++++|.+  .++++++|++++..++.++. .+||.|++.++.|+++...+..    .|.+++.++
T Consensus       107 ~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~  186 (447)
T PRK00451        107 SQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVP  186 (447)
T ss_pred             chHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEec
Confidence            4455566666778889999975  34567777778777777764 7899999999999988776654    578888877


Q ss_pred             CC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE--EcCcccccccCCCC
Q psy15447        193 HN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV--DESVSFGTLGSTGH  266 (457)
Q Consensus       193 ~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~--DEa~~~g~~g~~g~  266 (457)
                      .+    |++++++.+.           +++++|+++++ |++|.+.|+++|.++|+++|+++++  |.+ +.|.+..   
T Consensus       187 ~~~~~~d~~~l~~~i~-----------~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~---  250 (447)
T PRK00451        187 YEDGVTDLEALEAAVD-----------DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKP---  250 (447)
T ss_pred             CCCCCCCHHHHHHhcC-----------CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCC---
Confidence            64    6778877774           24577777777 7899999999999999999999998  433 3332211   


Q ss_pred             ccccccCCCCCCccEEEec---Ccccc--c-CcccEEEecHHHHHHHHhh----------CC-------------cceec
Q psy15447        267 GVTEYFGVSTEEVDMIIGS---LEHAL--G-SVGGFCVGSSYIIEHHRLS----------GS-------------GYCFS  317 (457)
Q Consensus       267 ~~~~~~~~~~~~~Di~~~s---~sK~l--g-~~gG~v~~~~~~~~~~~~~----------~~-------------~~~~~  317 (457)
                           .+  ..++|++++|   ++|.+  | ...|+++.++++++.+...          ..             .+...
T Consensus       251 -----~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (447)
T PRK00451        251 -----PG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKA  323 (447)
T ss_pred             -----cc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccc
Confidence                 11  1355888884   44443  3 3348888888887764110          00             00000


Q ss_pred             C-C--C-cHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe--EEEEecCCcchHHH
Q psy15447        318 A-S--L-PPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL--KYLYLQKSDDEVAS  389 (457)
Q Consensus       318 ~-~--~-~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~  389 (457)
                      + +  . .++...++..+++.+.+  .++..+++.++++++.+.|++   ++++++. . ...+  +.+.++  .     
T Consensus       324 ~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~---~~g~~~~-~-~~~~~~~~v~~~--~-----  391 (447)
T PRK00451        324 TSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAE---IGGVELF-D-GPFFNEFVVRLP--K-----  391 (447)
T ss_pred             cccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhh---cCCEEec-C-CCeEEEEEEecC--C-----
Confidence            0 1  1 11221222223443322  245678889999999999988   4677764 2 2212  223332  1     


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                        ...+++++|.++||.+.....+..  +...+.+|++++..+|++|+++++++|++++
T Consensus       392 --~~~~~~~~L~~~gi~~~~~~~~~~--~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        392 --PAEEVNEALLEKGILGGYDLGRYY--PELGNHLLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             --CHHHHHHHHHhcCCCCCccccccc--CCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence              235799999999887432111110  1224689999998899999999999998764

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=2.1e-20  Score=184.41  Aligned_cols=295  Identities=15%  Similarity=0.182  Sum_probs=202.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCC-CHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHN-NMQH  198 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~-d~~~  198 (457)
                      ++...+||+.++++.|.+.++.++||+.|+..++.++.++||.|++....|+++...    +...|.++.+++.+ |+++
T Consensus        60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~  139 (432)
T PRK06702         60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADE  139 (432)
T ss_pred             CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence            567899999999999999999999999999999999999999999999999877665    56679999988875 8999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++++++           ++++|++|++.||++.+.++++|+++|++||+++|+|++++...+       +.  .+ ..+
T Consensus       140 l~~~I~~-----------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-------~~--pl-~~G  198 (432)
T PRK06702        140 IVALAND-----------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-------CQ--AF-EHG  198 (432)
T ss_pred             HHHhCCc-----------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-------CC--hh-hcC
Confidence            9998853           567888999999999999999999999999999999999753211       11  11 135


Q ss_pred             ccEEEecCcccccC----cccEEEecH----------HHH---------------------HHHHhhCCcceecCCCcHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSS----------YII---------------------EHHRLSGSGYCFSASLPPF  323 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~----------~~~---------------------~~~~~~~~~~~~~~~~~~~  323 (457)
                      +||++.|++|.+|+    .||.++...          .+.                     ...+.. ....++..++|+
T Consensus       199 ADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~sp~  277 (432)
T PRK06702        199 ANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQ-LLRDYGNCMSPF  277 (432)
T ss_pred             CCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHH-HHHHccCCCCHH
Confidence            68999999998864    346555321          111                     111100 111345578999


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchHH
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~~  388 (457)
                      .++.++..|+.+.   .++++..+|+..+.+.|++++.+..+..++               ...+.++.+.++...    
T Consensus       278 ~a~l~~rgL~Tl~---lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~----  350 (432)
T PRK06702        278 NAYISNIGLETLH---LRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGL----  350 (432)
T ss_pred             HHHHHHhccCcHH---HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH----
Confidence            9988888876554   477888899999999999844322222111               012457788876432    


Q ss_pred             HHHHHHHHHHHHHHcCeeEecc------ccCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCP------SHLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~------~~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                        ..+.++++.|.=-.+.+..+      .+|..    .        ....++.+|+++.+    ||.|.+++-|+++++-
T Consensus       351 --~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~  424 (432)
T PRK06702        351 --EAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALVG  424 (432)
T ss_pred             --HHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence              13445666553212111111      11111    0        11225689999986    4566666666666654


Q ss_pred             hcC
Q psy15447        451 AVQ  453 (457)
Q Consensus       451 ~~~  453 (457)
                      -++
T Consensus       425 ~~~  427 (432)
T PRK06702        425 GKQ  427 (432)
T ss_pred             Ccc
Confidence            444

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.88  E-value=2.4e-19  Score=170.88  Aligned_cols=296  Identities=17%  Similarity=0.131  Sum_probs=217.4

Q ss_pred             hHHHHHHHHHHHhhcCCC--cE-EEecccHHHHHHHHHhhcCCCCEEEE-eCcccHHHH-HHHHhcCCeEEEecC-----
Q psy15447        124 NVVHLDLENDIASFMGLE--ET-ALYSFGFSTSASAIAAYVKRNDAVFV-DENINFAIQ-TGLIASRCKVQYFKH-----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~--~~-i~~~sG~~a~~~ai~a~~~~gd~v~~-~~~~h~~~~-~~~~~~g~~~~~~~~-----  193 (457)
                      .+...++.+.|...++.+  .+ ++.+||+.+.++++..+.+|||.|++ ..+.++.-+ .-+...|.++..+..     
T Consensus        37 ~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~  116 (383)
T COG0075          37 VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVEWGEA  116 (383)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCCCCCC
Confidence            466778888888999976  44 45578999999999999999997665 555565544 345667777765543     


Q ss_pred             CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      -|++++++.|++.         +...+|.+.+.-..||.+.|+++|.++|++||+++|+|.+.++|...         +.
T Consensus       117 v~p~~v~~~L~~~---------~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~---------~~  178 (383)
T COG0075         117 VDPEEVEEALDKD---------PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEP---------LK  178 (383)
T ss_pred             CCHHHHHHHHhcC---------CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcc---------cc
Confidence            3899999999853         35567777777778999999999999999999999999998876432         34


Q ss_pred             CCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCCc-ce---------------ecCCCcHHHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGSG-YC---------------FSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~aaa~a~l~~~  335 (457)
                      ++..++|+++++-.|+++. +| |++..+++..+.+....++ |.               +-.++|.....+..++|+.+
T Consensus       179 vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i  258 (383)
T COG0075         179 VDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI  258 (383)
T ss_pred             hhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            4445679999999999974 45 7888888887777543322 11               11234555556677888888


Q ss_pred             hhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeE-EEEecCCcchHHHHHHHHHHHHHHHHc-CeeEec
Q psy15447        336 KAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLK-YLYLQKSDDEVASKKLLQTICDMCIQA-GFAITC  409 (457)
Q Consensus       336 ~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~  409 (457)
                      .++  +.+.++.+++++++++.+++    .|+++..+.  .++.+ .+.++.+.       ...++...++++ |+.+..
T Consensus       259 ~~EGle~r~~RH~~~~~a~r~~~~a----lGl~~~~~~~~~s~tvta~~~P~g~-------~~~~~~~~~~~~~g~~i~g  327 (383)
T COG0075         259 LEEGLEARIARHRRLAEALRAGLEA----LGLELFADPERRSPTVTAIKVPEGV-------DDKKVRRALLKEYGVEIAG  327 (383)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHH----cCCccccCcccCCCceEEEECCCCC-------CcHHHHHHHHHhCCEEecc
Confidence            766  67889999999999999999    788776522  24333 34444433       222333355555 888877


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +..+     ..+..+||...-..+.+++...+++|+.++.++..
T Consensus       328 g~~~-----l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~  366 (383)
T COG0075         328 GQGP-----LKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV  366 (383)
T ss_pred             cccc-----cCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence            6542     33579999988889999999999999999988754

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.88  E-value=2.3e-20  Score=185.53  Aligned_cols=293  Identities=14%  Similarity=0.166  Sum_probs=199.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....|++.+|++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+..    .+...|.++..++..|+++
T Consensus        62 ~~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~  141 (431)
T PRK08248         62 MNPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN  141 (431)
T ss_pred             CCchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence            356678899999999999999999999999999999999999999999988876443    3456789999999889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|+++++.||+|.+.|+++|.++|+++|+++|+|++++.+...   .      .+ ..+
T Consensus       142 l~~ai~~-----------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~---~------pl-~~g  200 (431)
T PRK08248        142 FEAAITD-----------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL---R------PI-EHG  200 (431)
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC---C------hh-HcC
Confidence            9888753           4578889999999999999999999999999999999997643211   1      11 135


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHH-----------------------H---------HHHhhCCcceecCCCcH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYII-----------------------E---------HHRLSGSGYCFSASLPP  322 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~-----------------------~---------~~~~~~~~~~~~~~~~~  322 (457)
                      +|+++.|++|.+|+.    ||+++.+.+..                       +         ..+. ......+..++|
T Consensus       201 aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G~~l~p  279 (431)
T PRK08248        201 ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARV-QLLRDLGAALSP  279 (431)
T ss_pred             CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHH-HHHHhcCCCCCH
Confidence            689999999999754    46666433210                       0         0000 011234566889


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~  387 (457)
                      ..|+..+..|+-+.   .++++..+++..+.+.|++++.+..+..++               ...+.++.+.+++..   
T Consensus       280 ~~a~l~~rgl~tl~---~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~---  353 (431)
T PRK08248        280 FNSFLLLQGLETLH---LRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGV---  353 (431)
T ss_pred             HHHHHHhcCcCcHH---HHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCH---
Confidence            88888877765543   477888999999999999854332222211               012557888876432   


Q ss_pred             HHHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                         ..+.++.+.|.=-.+.++.+      .+|..            .....++.+||++.+.    |.+.+++-|+++++
T Consensus       354 ---~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE----d~~dL~~Dl~~Al~  426 (431)
T PRK08248        354 ---EAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGTE----AIDDILDDLRQAIR  426 (431)
T ss_pred             ---HHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHH
Confidence               13455666554111111111      11211            0112357899999864    34445555555554


Q ss_pred             H
Q psy15447        450 I  450 (457)
Q Consensus       450 ~  450 (457)
                      .
T Consensus       427 ~  427 (431)
T PRK08248        427 Q  427 (431)
T ss_pred             h
Confidence            3

>KOG0259|consensus

Probab=99.88  E-value=2e-19  Score=165.42  Aligned_cols=335  Identities=14%  Similarity=0.142  Sum_probs=226.0

Q ss_pred             eeeEEeecCCccCCC---CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEecc
Q psy15447         80 IPCINFATHNYLSFV---ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSF  148 (457)
Q Consensus        80 ~~~id~~s~~~l~~~---~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~s  148 (457)
                      |++|-+..+++.-++   ..++..+|+.++++. |.+.+     |+...-....++++|+++.        .++++++++
T Consensus        61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S-gk~N~-----Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsG  134 (447)
T KOG0259|consen   61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS-GKGNG-----YAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSG  134 (447)
T ss_pred             ceeccCCCCCCCccccccCCHHHHHHHHHHHhc-CCCCC-----cCCccccHHHHHHHHHHhhcCCCCccCcCceEEecc
Confidence            577777776554443   467888999988875 33221     2222333455566666632        456788888


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++|++.++.++.+||.-|+++++.+..+..-...++.+++.|+.-       |++.+|.++++           +++++
T Consensus       135 C~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE-----------NT~Ai  203 (447)
T KOG0259|consen  135 CSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE-----------NTVAI  203 (447)
T ss_pred             chHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc-----------CeeEE
Confidence            8999999999999999999999999888777778888888887632       78888888864           55777


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCc---c
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSV---G  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~---g  294 (457)
                      ++.++.||.|.+..   |++|+++|+++|+.+|.||+|+..++|..-.- ....-.+.|   .|.++++||.+=.+   -
T Consensus       204 vviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP---VitlggisKrW~VPGWRl  280 (447)
T KOG0259|consen  204 VVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP---VITLGGISKRWIVPGWRL  280 (447)
T ss_pred             EEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc---eEeecccccccccCCcee
Confidence            77778889999987   89999999999999999999998888753211 112222334   68899999988444   4


Q ss_pred             cEEEecH--------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCc-----HHHHHHHHHHHHHHHHhhcccc
Q psy15447        295 GFCVGSS--------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANP-----SLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       295 G~v~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~-----~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      ||++..+        .+++.+.+...   -. ..|+....+|+-  +++++.+     ....-++.+++.-.+.|++   
T Consensus       281 GWi~~hD~~gvf~~~~~~q~~~~~~~---~~-~~p~TiiQ~AlP--~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~---  351 (447)
T KOG0259|consen  281 GWIALHDPRGVFRDTKVVQGIKNFLD---II-PGPATIIQGALP--DILEKTPEEFFDKKLSFLKSNADLCYSRLKD---  351 (447)
T ss_pred             eeEEEecccccccchHHHHHHHHHHh---cc-CCccHhHHHHhH--HHHHhChHHHHHHHHHHHHhhHHHHHHHHhc---
Confidence            8876542        23333332211   11 123333333322  2233332     3456677888888999999   


Q ss_pred             cCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447        362 TQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       362 ~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~  439 (457)
                      ++++.+...+.+.+ .++.+....  -.+-.+-.+++++|. |+.+.+-|+..     +..+|++|+++.  ...+.+++
T Consensus       352 IP~l~cp~kPeg~mylmv~l~~s~--~~~~~dD~dFc~kL~~Eesv~~LPG~a-----f~~~nw~Ri~i~--~~~~~lee  422 (447)
T KOG0259|consen  352 IPCLTCPVKPEGCMYLMVKLNLSL--FPDIEDDVDFCQKLAREESVICLPGQA-----FGLKNWLRIVIT--VEEEMLEE  422 (447)
T ss_pred             CCCcccCcCCCcceEEEeccchhh--hccccccHHHHHHHhhhcceEEecccc-----ccCCCeEEEEEc--cChHHHHH
Confidence            78888654455444 344333210  000013346777775 56888888765     455899999986  47889999


Q ss_pred             HHHHHHHHHHHhc
Q psy15447        440 LIETLCKSHDIAV  452 (457)
Q Consensus       440 ~~~~l~~~~~~~~  452 (457)
                      +++.|+++..+-.
T Consensus       423 a~~Rik~Fc~RH~  435 (447)
T KOG0259|consen  423 AFSRIKEFCDRHS  435 (447)
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999887654

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.88  E-value=5.4e-20  Score=180.58  Aligned_cols=210  Identities=13%  Similarity=0.165  Sum_probs=156.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++...+|+++++++.|.+.+++++||+.|+..++ .++++||.|++..+.|+....    .+...|.++..++..|+++
T Consensus        48 ~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~  126 (380)
T PRK06176         48 GNPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQ  126 (380)
T ss_pred             CChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHH
Confidence            35668899999999999999999999999988666 567999999998887776543    2455678888888888999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++|++.||+|.+.|+++|.++|++||+++|+|++++.+..+.   .      +. .+
T Consensus       127 l~~ai~-----------~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~---p------~~-~g  185 (380)
T PRK06176        127 IKKAIK-----------PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN---P------LL-LG  185 (380)
T ss_pred             HHHhcC-----------cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC---c------cc-cC
Confidence            988774           346899999999999999999999999999999999999987553321   1      11 24


Q ss_pred             ccEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+++    .||+++++ +++.+.++...  ...+..++|..+......++.+   +.++++..++...+.
T Consensus       186 aDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~~~l~~~gl~tl---~~R~~~~~~~a~~la  260 (380)
T PRK06176        186 ADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ--NAIGGVLGPQDSWLLQRGIKTL---GLRMEAHQKNALCVA  260 (380)
T ss_pred             CCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHH--HHhcCCCCHHHHHHHHhccCcH---HHHHHHHHHHHHHHH
Confidence            58999999999964    36777764 55655554322  1123335666655554444333   336677778888888


Q ss_pred             HHhhcc
Q psy15447        354 SLLSQH  359 (457)
Q Consensus       354 ~~L~~~  359 (457)
                      +.|++.
T Consensus       261 ~~L~~~  266 (380)
T PRK06176        261 EFLEKH  266 (380)
T ss_pred             HHHHhC
Confidence            888874

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.88  E-value=4.8e-20  Score=180.86  Aligned_cols=211  Identities=18%  Similarity=0.193  Sum_probs=162.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|+++++++.|.+.+++++||+.++..++ .++++||.|++..+.|++...    .+...|.++..++..|+++
T Consensus        48 ~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~  126 (377)
T PRK07671         48 GNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEE  126 (377)
T ss_pred             CChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence            45678999999999999999999999998877665 577899999999998875543    2344688888888889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.++++|.++|+++|+++|+||+++.+..+.   .    ..   .+
T Consensus       127 l~~ai~~-----------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~---p----~~---~g  185 (377)
T PRK07671        127 VEEAIRP-----------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS---P----IS---LG  185 (377)
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC---h----hh---hC
Confidence            9888753           46799999999999999999999999999999999999986543321   1    11   24


Q ss_pred             ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|++|+    .+|+++. ++++++.++...  ...+..++|..+..++..++.+.   .++++..++...+.
T Consensus       186 ~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~--~~~g~~~~~~~a~l~~~~l~tl~---~R~~~~~~na~~la  260 (377)
T PRK07671        186 ADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ--NSTGGILGPQDSWLLLRGLKTLG---IRMEEHETNSRAIA  260 (377)
T ss_pred             CeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH--HhhcCCCCHHHHHHHHcCcChHH---HHHHHHHHHHHHHH
Confidence            58999999999974    3576555 566776665322  12244578888887776665554   36788889999999


Q ss_pred             HHhhccc
Q psy15447        354 SLLSQHK  360 (457)
Q Consensus       354 ~~L~~~~  360 (457)
                      +.|++.+
T Consensus       261 ~~L~~~~  267 (377)
T PRK07671        261 EFLNNHP  267 (377)
T ss_pred             HHHHcCC
Confidence            9998843

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.88  E-value=6.7e-20  Score=176.00  Aligned_cols=292  Identities=19%  Similarity=0.226  Sum_probs=207.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.++.+-|.+.++.++||..|+..++.++.++||+|+.....|+.+..-    ++..|.++..++..+.+.
T Consensus        61 ~nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~  140 (396)
T COG0626          61 GNPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEA  140 (396)
T ss_pred             CCccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHH
Confidence            3677899999999999999999999999999999999999999999988877765542    345688888888777777


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+.+          +++++|++|++.||+-.+.++++|+++|+++|+++|+|+.++.+.+-         ..+ +.+
T Consensus       141 ~~~~~~~----------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q---------~PL-~~G  200 (396)
T COG0626         141 LEAAIKE----------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ---------RPL-ELG  200 (396)
T ss_pred             HHHHhcc----------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc---------Chh-hcC
Confidence            7777653          36789999999999999999999999999999999999997755431         112 135


Q ss_pred             ccEEEecCcccccC----cccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +||++.|.+|.+|+    .||+++++. ++.+.+..... ...+..+.|.-+...+..++-+.   .++++..+|+..+.
T Consensus       201 aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~-~~~G~~l~p~dA~l~lRGlkTL~---~Rm~~~~~nA~~IA  276 (396)
T COG0626         201 ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQR-ANTGAVLSPFDAWLLLRGLRTLA---LRMERHNENALKIA  276 (396)
T ss_pred             CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHH-hhcCCCCCHHHHHHHHhccchHH---HHHHHHHHHHHHHH
Confidence            69999999999974    467777654 45444422221 13556689999888888876664   37888999999999


Q ss_pred             HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc------ccC
Q psy15447        354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP------SHL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~  413 (457)
                      +.|++++.+..+..++.              ..+.++.+.+.+..       .+.++.+.|.--.+..+.+      .+|
T Consensus       277 ~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~-------~~~~f~~~L~l~~~a~SlGgveSLi~~p  349 (396)
T COG0626         277 EFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEE-------AAKKFLDSLKLFKLAESLGGVESLISHP  349 (396)
T ss_pred             HHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChH-------HHHHHHHhCCccEEeccCCCcccccccc
Confidence            99988443322222210              14678888888742       4556666654322222211      222


Q ss_pred             cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..            .....++.+|+++....    ++.+++-|+++++
T Consensus       350 a~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd----~eDLi~Dl~~Al~  393 (396)
T COG0626         350 ATMTHASIPLEERAKAGITDGLVRLSVGLED----VEDLIADLEQALA  393 (396)
T ss_pred             cccCcccCCHhHHHhcCCCCCeEEEEecCCC----HHHHHHHHHHHHH
Confidence            11            12233678999998654    4444444444443

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.88  E-value=5.8e-20  Score=184.46  Aligned_cols=338  Identities=12%  Similarity=-0.009  Sum_probs=198.1

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHH-HHHHhhcC----CC---cEEEecccHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLE-NDIASFMG----LE---ETALYSFGFS  151 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~-~~la~~~g----~~---~~i~~~sG~~  151 (457)
                      +.+++++-+.+ ++.. |++..++.+.+.  +..+   ....|..+..+++. +.+.+..+    .+   ++++++++++
T Consensus        94 ~~~i~l~~g~p-~~~~-~~~~~~~~~~~~--~~~Y---~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~  166 (521)
T TIGR03801        94 RDIISYVIDQL-GFDP-DAFLYEMCDGII--GDNY---PVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA  166 (521)
T ss_pred             HHHHhhcCCCC-CCCC-CHHHHHHHHHhh--cCCC---CCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence            34566666544 5653 455566666653  2221   11223444444444 33333322    22   4556667778


Q ss_pred             HHHHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecC------------CCHHHHHHHHHhhchhccc
Q psy15447        152 TSASAIAA-----YVKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKH------------NNMQHLEELLRQQDERDTL  212 (457)
Q Consensus       152 a~~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~------------~d~~~le~~l~~~~~~~~~  212 (457)
                      |+..++.+     ++.+||.|++..++|..+...+.+.  +.+++.++.            .|++++++++.        
T Consensus       167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~--------  238 (521)
T TIGR03801       167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD--------  238 (521)
T ss_pred             HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC--------
Confidence            88887776     6899999999999999888877765  556555442            14566665432        


Q ss_pred             CCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE  287 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s  287 (457)
                         ++++++++.+++||+|.+.+   +++|.++|++|  ++++|.||+|+....  ....+..   ..+++ .|++.|||
T Consensus       239 ---~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~sl~~---~~~~~-vI~v~SfS  309 (521)
T TIGR03801       239 ---PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFRSLFA---ELPYN-TIGVYSFS  309 (521)
T ss_pred             ---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--cccchhh---hCCCC-EEEEEcch
Confidence               35677777788999999998   67888889987  999999999975332  1112212   22333 48899999


Q ss_pred             ccccCcc---cEEEecHH-----HHH--------HH------------------------HhhCCcceecCCCcHHHH--
Q psy15447        288 HALGSVG---GFCVGSSY-----IIE--------HH------------------------RLSGSGYCFSASLPPFLA--  325 (457)
Q Consensus       288 K~lg~~g---G~v~~~~~-----~~~--------~~------------------------~~~~~~~~~~~~~~~~~~--  325 (457)
                      |.+|++|   ||++++++     ++.        .+                        +.....++.+.+ .|...  
T Consensus       310 K~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s-~p~Q~q~  388 (521)
T TIGR03801       310 KYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLS-TPQQVQM  388 (521)
T ss_pred             hhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCC-cHHHHHH
Confidence            9998776   99988754     221        11                        111111122222 22222  


Q ss_pred             H--HHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc---h-HHH-----HHHH
Q psy15447        326 V--AANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD---E-VAS-----KKLL  393 (457)
Q Consensus       326 a--aa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~~-----~~~~  393 (457)
                      +  ++.+.++.-+. .++.++.++++.+.+.+.| .    ..+....+..+..+++.+..-..   . +..     ....
T Consensus       389 al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L-g----~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~  463 (521)
T TIGR03801       389 ALFSLFALMDKENAYKAETKDICRRREKLLFRGL-G----LPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSP  463 (521)
T ss_pred             HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc-C----CCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCH
Confidence            2  22223221111 1234566777777776665 2    11212223334555565542100   0 000     0023


Q ss_pred             HHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        394 QTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       394 ~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+++.+|.++ ||.+.|+..+.    ...+++|+++.. .++++++++.+.|++++++..
T Consensus       464 ~~~~~~L~~e~gV~v~PG~~Fg----~~~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~  518 (521)
T TIGR03801       464 VDVLFRLAEETGIVLLPGGGFG----GPEWSVRVSLAN-LNEYDYAEIGRAIRKILDEYY  518 (521)
T ss_pred             HHHHHHHHHhCCEEEeCchhcC----CCCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHH
Confidence            5677777765 99999887542    224689999953 689999999999999987654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PLN02368 alanine transaminase

Probab=99.88  E-value=3.8e-20  Score=183.03  Aligned_cols=252  Identities=11%  Similarity=0.090  Sum_probs=172.1

Q ss_pred             ccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--
Q psy15447        121 YGTNVVHLDLENDIASFMGL----EETALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAIQTGLIASRCKVQYFKH--  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--  193 (457)
                      .|..++.+.+++.+.+..|.    +++++++++++++..++.+++ ++||.|++..++|..+...+...|.+++.++.  
T Consensus       107 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~  186 (407)
T PLN02368        107 RGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEE  186 (407)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeccc
Confidence            34555555566555554452    344555556689998999887 79999999999999999999999988877653  


Q ss_pred             -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                           .|++++++.++.....     ..+++++++.+++||||.+.+   +++|.++|++||+++|.||+|+...++...
T Consensus       187 ~~~~~~d~~~le~~i~~~~~~-----~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~  261 (407)
T PLN02368        187 SENWGLDVNNLRQSVAQARSK-----GITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDER  261 (407)
T ss_pred             ccCCCCCHHHHHHHHHHHhhc-----CCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence                 3688898888642210     124677777778999999998   678888999999999999999876553211


Q ss_pred             C--cccccc-CCCC----CCccEEEecCcccc-cCcc---cEEE---ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHH
Q psy15447        266 H--GVTEYF-GVST----EEVDMIIGSLEHAL-GSVG---GFCV---GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKA  331 (457)
Q Consensus       266 ~--~~~~~~-~~~~----~~~Di~~~s~sK~l-g~~g---G~v~---~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~  331 (457)
                      .  .+.... ++.+    ....|+++||||++ |.+|   ||++   +++++++.+.... ...+  +.+.++..++.++
T Consensus       262 ~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~~~--~~~~~~Q~aa~~~  338 (407)
T PLN02368        262 PFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SIAL--SPNVSGQIFMGLM  338 (407)
T ss_pred             CcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cccC--CCCcHHHHHHHHH
Confidence            1  111110 1111    12358899999998 6555   9988   4888888876642 2222  3455666666666


Q ss_pred             HHH-----------HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        332 LHL-----------LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       332 l~~-----------~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      ++.           .++..++++.++++++.+.+.|++   ++|+.+..+.++..+|..+.-+
T Consensus       339 l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~---~~g~~~~~P~Gafy~~~~i~lp  398 (407)
T PLN02368        339 VNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNS---CKNVVCNFTEGAMYSFPQIKLP  398 (407)
T ss_pred             hCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCeEeCCCCeeeEeccCCCCC
Confidence            631           111123567888999999999998   5788887555566666555544

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.88  E-value=8.1e-20  Score=160.51  Aligned_cols=328  Identities=12%  Similarity=0.096  Sum_probs=224.2

Q ss_pred             hhHHHHHHHHHhcCCCCCC------CCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         98 DIEKCAIDCIDKNGVGSCG------PRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        98 ~i~~a~~~~l~~~~~~~~~------~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      -+.+++++++-.||-+++-      -++-.-+.++...+-+.|++|+|.+.+.++++.-+|-.+++.+++++||.|++|.
T Consensus        28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~  107 (382)
T COG1103          28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDS  107 (382)
T ss_pred             cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcC
Confidence            3556777777777755432      2222334667778888899999999999999988999999999999999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      .+|.++.-++...|.++..+|+.       +++...+.|++..++    ..+.+++.++.++-+.-|.+.+.+++.++|+
T Consensus       108 ~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~----~g~~~~lallTh~Dg~YGNl~Dakkva~ic~  183 (382)
T COG1103         108 LAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDE----GGDPPALALLTHVDGEYGNLADAKKVAKICR  183 (382)
T ss_pred             cchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhc----cCCCceEEEEeccCCCcCCchhhHHHHHHHH
Confidence            99999999999999999988854       577777777765432    1245678888889999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhC-Ccc------e
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSG-SGY------C  315 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~-~~~------~  315 (457)
                      +||+.+++..+|+.|++.-+++      .   -++|++++|-+|+++.  +.|.+..+.++.+.....+ ..+      .
T Consensus       184 e~gvPlllN~AYt~Grmpvs~k------e---~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvel  254 (382)
T COG1103         184 EYGVPLLLNCAYTVGRMPVSGK------E---IGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVEL  254 (382)
T ss_pred             HcCCceEeecceeecccccccc------c---cCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeee
Confidence            9999999999999888754332      1   2458999999999964  4599999998888764333 211      1


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCCcch-HHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKSDDE-VASKKL  392 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~  392 (457)
                      ++.+.-.......++++-...+.-.++..--+++++|.+.|++   +.|+...+.  ...-++.+..+.-.+. ......
T Consensus       255 lGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEk---igg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~  331 (382)
T COG1103         255 LGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVAELEK---IGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRK  331 (382)
T ss_pred             ecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHhCCCCcccceeeecCchHHHHHHhCcCC
Confidence            2222111112333444433333212333444678889888888   344443332  2222333322210000 000012


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..-+.+.|.++||.-..        +....++.+++ +..+.|+++..+++++++++.
T Consensus       332 gyFlY~ELK~RgI~GI~--------~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek  380 (382)
T COG1103         332 GYFLYEELKKRGIHGIQ--------PGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK  380 (382)
T ss_pred             ceeeHHHHHhcCccccc--------cCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence            23467888888875322        12245788887 558999999999999998764

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.88  E-value=6.9e-20  Score=179.32  Aligned_cols=283  Identities=17%  Similarity=0.203  Sum_probs=194.8

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...+|++++|++. .+.++++++|++|+..++.+++++||.|++..+.|+.+...    +...|.++..++.++... 
T Consensus        50 ~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~-  127 (366)
T PRK07582         50 NPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE-  127 (366)
T ss_pred             CccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH-
Confidence            456789999999999 67889999999999999999999999999988877665443    234688888888765432 


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                       ...            +++++|++|+++||+|.+.++++|.++|+++|+++++|++|..+ .|.   ..   ..   .++
T Consensus       128 -~~~------------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~-~~~---~p---~~---~g~  184 (366)
T PRK07582        128 -AAL------------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP-LGQ---RP---LE---LGA  184 (366)
T ss_pred             -Hhc------------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc-ccc---Cc---hh---cCC
Confidence             111            35678889999999999999999999999999999999998532 121   11   11   234


Q ss_pred             cEEEecCcccccC-c---ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS-V---GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~-~---gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |++++|++|++++ .   +||+++ ++++++.++....  ..+..++|+.++.++..++.+.   .++++..+++..+.+
T Consensus       185 Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~a~l~~r~l~tl~---~R~~~~~~na~~la~  259 (366)
T PRK07582        185 DLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRL--LAGAIPGPFEAWLAHRSLGTLG---LRFARQCANALAVAE  259 (366)
T ss_pred             cEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccccHH---HHHHHHHHHHHHHHH
Confidence            8999999999954 2   488876 4677776653221  2234568888887777766443   467888899999999


Q ss_pred             HhhcccccCCeEEec---cC-----------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc---Ccc--
Q psy15447        355 LLSQHKVTQRFLVQG---HR-----------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH---LDQ--  415 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~---~~-----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---~~~--  415 (457)
                      .|++++.+..+..++   .+           .+.++.+.+++..       .   +.+.+...++.......   -+.  
T Consensus       260 ~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~-------~---~~~~~~~l~~~~~~~s~G~~~sl~~  329 (366)
T PRK07582        260 LLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAA-------A---AERFVAASRLVVAATSFGGVHTSAD  329 (366)
T ss_pred             HHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHH-------H---HHHHHHhCCcceecccCCCccchhh
Confidence            999855444443322   11           3567888886321       2   33333344554321111   000  


Q ss_pred             -----ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        416 -----EAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       416 -----~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                           .....++.+|+++++...++.++.+.++|++
T Consensus       330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~~  365 (366)
T PRK07582        330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALDA  365 (366)
T ss_pred             hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence                 0012246899999998887778877777753

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.88  E-value=4.6e-20  Score=183.65  Aligned_cols=213  Identities=17%  Similarity=0.184  Sum_probs=154.7

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++...+|+++||++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+..    .+...|.++..++.+|+++
T Consensus        55 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~  134 (418)
T TIGR01326        55 MNPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE  134 (418)
T ss_pred             CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence            356678999999999999999999999999999999999999999998887765433    3456788999998889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.|+++|+++|++||+++|+|++++.+....       .  . ..+
T Consensus       135 l~~~l~~-----------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~~-------~--l-~~g  193 (418)
T TIGR01326       135 FEKAIDE-----------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLCR-------P--I-DHG  193 (418)
T ss_pred             HHHhcCc-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcCC-------c--h-hcC
Confidence            9888753           45788899999999999999999999999999999999987542211       1  1 124


Q ss_pred             ccEEEecCcccccCcc----cEEEecHHHHHH-------------------------------HHhhCCcceecCCCcHH
Q psy15447        279 VDMIIGSLEHALGSVG----GFCVGSSYIIEH-------------------------------HRLSGSGYCFSASLPPF  323 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~g----G~v~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~  323 (457)
                      +|+++.|++|++|+.|    |+++.++.+...                               .+.... ...+..++|.
T Consensus       194 ~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~p~  272 (418)
T TIGR01326       194 ADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLL-RDLGAALSPF  272 (418)
T ss_pred             CeEEEECccccccCCccceEEEEEecccccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHH-HhcCCCCCHH
Confidence            5999999999997643    444433221100                               000000 0112344666


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      .+..++..++-+   ..++++..+++..+.+.|.+.+
T Consensus       273 ~a~~~~~~l~tl---~~R~~~~~~~a~~la~~L~~~~  306 (418)
T TIGR01326       273 NAFLLLQGLETL---SLRMERHVENALKVAEFLEAHP  306 (418)
T ss_pred             HHHHHHCCcccH---HHHHHHHHHHHHHHHHHHHhCC
Confidence            666555444333   2355666678888888888743

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.87  E-value=9.2e-20  Score=177.50  Aligned_cols=290  Identities=20%  Similarity=0.249  Sum_probs=196.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.|+++.|.+.+++++||..|+..++.+++++||.|++....|+.+..-+    ...|.++..++..|+++
T Consensus        53 gnPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~  132 (386)
T PF01053_consen   53 GNPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEA  132 (386)
T ss_dssp             C-HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHH
T ss_pred             ccccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHH
Confidence            47888999999999999999999999999999999999999999999998888776544    44689999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      +++.+++           ++++|++|++.||+..+.++++|+++|+++| +++++|..++.+..-       .  .+. .
T Consensus       133 l~~~l~~-----------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-------~--pL~-~  191 (386)
T PF01053_consen  133 LEAALRP-----------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-------N--PLE-L  191 (386)
T ss_dssp             HHHHHCT-----------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC----------GGG-G
T ss_pred             HHhhccc-----------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-------c--cCc-C
Confidence            9999964           6789999999999999999999999999998 999999987543211       0  011 2


Q ss_pred             CccEEEecCcccccC----cccEEEec--HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGS----VGGFCVGS--SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~----~gG~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      ++||++.|++|.+++    .||+++.+  +++.+.++...  ..++..++|..|...+..++-+.   .++++..+++..
T Consensus       192 GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~~~G~~~~p~da~ll~rgl~Tl~---~R~~~~~~nA~~  266 (386)
T PF01053_consen  192 GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR--RLLGATLSPFDAWLLLRGLRTLP---LRMERQNENAEA  266 (386)
T ss_dssp             T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH--HHHT-B--HHHHHHHHHHHTTHH---HHHHHHHHHHHH
T ss_pred             CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh--hhcCccchHHHHHHHhcCCCcHH---HHHHHHHHHHHH
Confidence            459999999999964    35777755  46766665332  34556678888887777765553   478899999999


Q ss_pred             HHHHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------
Q psy15447        352 MHSLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------  411 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------  411 (457)
                      +.+.|++++.+..+..++-              ..+.++.+.+++..      ..+.++.+.|.=-++..+.+.      
T Consensus       267 lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~------~~~~~f~~~l~l~~~~~SlGg~~SLi~  340 (386)
T PF01053_consen  267 LAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGE------EAARRFLDALKLFSIAPSLGGVESLIS  340 (386)
T ss_dssp             HHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHH------HHHHHHHHH-SSSEESSS-SSSS-EEE
T ss_pred             HHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccch------hhhHhHHhhhhhHhhhhhcCCcccccc
Confidence            9999998543333333211              22468888888752      145566666641111111111      


Q ss_pred             cCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        412 HLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       412 ~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      +|..            .....++.+|+++.+.    |.+.+++-|++++
T Consensus       341 ~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlE----d~~dLi~Dl~~AL  385 (386)
T PF01053_consen  341 HPASTSHRSLSPEERAEAGISDGLIRLSVGLE----DPDDLIADLEQAL  385 (386)
T ss_dssp             ETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-----HHHHHHHHHHHH
T ss_pred             cccchhhccCChhhhhccCCCCCeeEEEeccC----CHHHHHHHHHHhc
Confidence            1111            0122357899999864    4555566665554

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.87  E-value=6.8e-20  Score=182.10  Aligned_cols=248  Identities=14%  Similarity=0.143  Sum_probs=179.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++...++|+++|++.|.+.+++++||++|+..++.++.++||.|++....|+++...+    ...|.++.+++.+|+++
T Consensus        62 ~~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~  141 (433)
T PRK08134         62 SNPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDG  141 (433)
T ss_pred             cChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence            45778999999999999999999999999999999988999999999999888765543    33688899998889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.|..           ++++|+++++.|++|.+.|+++|.++|++||+++|+|.+++.+....         .+ ..+
T Consensus       142 l~~~i~~-----------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~---------pl-~~G  200 (433)
T PRK08134        142 WRAAIRP-----------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR---------PF-EHG  200 (433)
T ss_pred             HHHhcCC-----------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hcC
Confidence            9988853           56889999999999999999999999999999999999987654311         11 135


Q ss_pred             ccEEEecCcccccCcc----cEEEecHH--------------------------------HHHHHHhhCCcceecCCCcH
Q psy15447        279 VDMIIGSLEHALGSVG----GFCVGSSY--------------------------------IIEHHRLSGSGYCFSASLPP  322 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~g----G~v~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~  322 (457)
                      +|+++.|.+|.+|+.|    |+++....                                .....+... ...++..++|
T Consensus       201 aD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~G~~ls~  279 (433)
T PRK08134        201 ADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREG-LRDFGACLSP  279 (433)
T ss_pred             CCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHH-HHhcCCCCCH
Confidence            6899999999997543    55543210                                000011000 1133455788


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec---------------cCCCCeEEEEecCCcchH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG---------------HRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~---------------~~~~~~~~i~~~~~~~~~  387 (457)
                      ..|+..+..|+.+.   .++++..+++..+.+.|++++.+..+..++               ...+.++.+.++.+.   
T Consensus       280 ~~A~l~~~gL~tl~---~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~---  353 (433)
T PRK08134        280 MNAWQLLQGIETLP---LRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGR---  353 (433)
T ss_pred             HHHHHHhcCCCcHH---HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCH---
Confidence            88887777765543   478888999999999998854332222111               123567788876432   


Q ss_pred             HHHHHHHHHHHHHH
Q psy15447        388 ASKKLLQTICDMCI  401 (457)
Q Consensus       388 ~~~~~~~~~~~~l~  401 (457)
                         ..+.+|.+.|.
T Consensus       354 ---~~~~~f~~~l~  364 (433)
T PRK08134        354 ---AAGRKFIESLK  364 (433)
T ss_pred             ---HHHHHHHHhCC
Confidence               14456666654

>PRK02769 histidine decarboxylase; Provisional

Probab=99.87  E-value=2.8e-19  Score=174.74  Aligned_cols=289  Identities=13%  Similarity=0.084  Sum_probs=206.6

Q ss_pred             cChHHHHHHHHHHHhhcCCC--c--EEEecccHHHHHHHHHhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--
Q psy15447        122 GTNVVHLDLENDIASFMGLE--E--TALYSFGFSTSASAIAAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKH--  193 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a~~~ai~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--  193 (457)
                      .+.+...++.+.+++++|.+  .  .+++++|+++|..++.+..  .+++.|+++...|.+..++++..|.+...++.  
T Consensus        62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~  141 (380)
T PRK02769         62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP  141 (380)
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence            35567778888999999864  3  3677888999988876543  56789999999999999998888866555443  


Q ss_pred             ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC---cEEEEEcCcccccccCCCCc
Q psy15447        194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ---ARIFVDESVSFGTLGSTGHG  267 (457)
Q Consensus       194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g---~~li~DEa~~~g~~g~~g~~  267 (457)
                         .|+++|++.+.+.+        .++.+|++..+++++|.+.|+++|.++|++||   +++++|.+++.+.+.... .
T Consensus       142 ~g~id~~~L~~~i~~~~--------~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~-~  212 (380)
T PRK02769        142 NGEIDYDDLISKIKENK--------NQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVN-N  212 (380)
T ss_pred             CCcCcHHHHHHHHHhCC--------CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccC-c
Confidence               38899999987632        35678889999999999999999999999998   699999999876653110 0


Q ss_pred             cccccCCCCCCccEEEecCccccc-Cc-ccEEEecHHHHHHHHhhC-----CcceecCCCcHHHHHHHHHHHHHHhhC--
Q psy15447        268 VTEYFGVSTEEVDMIIGSLEHALG-SV-GGFCVGSSYIIEHHRLSG-----SGYCFSASLPPFLAVAANKALHLLKAN--  338 (457)
Q Consensus       268 ~~~~~~~~~~~~Di~~~s~sK~lg-~~-gG~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aaa~a~l~~~~~~--  338 (457)
                      . ..++.. .++|.++.|.||.+| +. .|++..+++..+.+....     ...+..++.+...+++.-++|+.+...  
T Consensus       213 ~-~~~d~~-~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~  290 (380)
T PRK02769        213 P-PPFSFA-DGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGL  290 (380)
T ss_pred             c-ccCCcc-CCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHH
Confidence            0 013332 267999999999987 33 377777776655542211     112233444444555555666666443  


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK  418 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~  418 (457)
                      .+..++..++++++.+.|++    .|+++...+...++.+..+.+           .+.     +|..+.+.        
T Consensus       291 ~~~~~~~~~la~~l~~~L~~----~g~~~~~~p~~~~v~f~~~~~-----------~~~-----~~w~l~~~--------  342 (380)
T PRK02769        291 RQRVQHCLDMAQYAVDRLQA----NGIPAWRNPNSITVVFPCPSE-----------RIW-----KKWHLATS--------  342 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHh----CCCEEEcCCCceEEEEcCCCH-----------HHH-----hCeeEccc--------
Confidence            45678888999999999988    688887777777776643321           221     46544432        


Q ss_pred             CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        419 KQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       419 ~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                        .+.+|+++...+|++.+|++++-|.+.....
T Consensus       343 --~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~  373 (380)
T PRK02769        343 --GNQAHIITMPHHNKQQIDSLIDELIFDLKNP  373 (380)
T ss_pred             --CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence              2589999999999999999999998877633

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.87  E-value=4.9e-19  Score=176.62  Aligned_cols=292  Identities=14%  Similarity=0.121  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh---------cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-
Q psy15447        125 VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY---------VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-  194 (457)
Q Consensus       125 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~---------~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-  194 (457)
                      +...++++++++++|.+.+++++||++|+..++.++         .++||.|++..+.|.++...+...|.+++.++.+ 
T Consensus        63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~  142 (438)
T PRK15407         63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL  142 (438)
T ss_pred             hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence            447899999999999999999999999999998876         4789999999999999999999999888776532 


Q ss_pred             -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc
Q psy15447        195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT  269 (457)
Q Consensus       195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~  269 (457)
                           |++++++.+.           +++++|+++++   .|...++++|+++|++||+++|+|++|++|..-. |+.. 
T Consensus       143 ~~~~id~~~le~~i~-----------~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~-g~~~-  206 (438)
T PRK15407        143 PTYNIDASLLEAAVS-----------PKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD-GRMT-  206 (438)
T ss_pred             CcCCcCHHHHHHHcC-----------cCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC-Ceee-
Confidence                 6778887764           24577777765   4667899999999999999999999999876421 2211 


Q ss_pred             cccCCCCCCccEEEecCc--cccc-CcccEEEecH-HHHHHH---HhhCCc-----------------------------
Q psy15447        270 EYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGSS-YIIEHH---RLSGSG-----------------------------  313 (457)
Q Consensus       270 ~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~~-~~~~~~---~~~~~~-----------------------------  313 (457)
                      ..+|      |+.+.||+  |.+. +.||+++.++ ++.+.+   +..+..                             
T Consensus       207 G~~g------d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (438)
T PRK15407        207 GTFG------DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHK  280 (438)
T ss_pred             eccC------ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccc
Confidence            1122      56677774  6563 4578887764 343333   221110                             


Q ss_pred             -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCC-eEEecc-CC-C---CeEEEEecC
Q psy15447        314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGH-RD-T---PLKYLYLQK  382 (457)
Q Consensus       314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~-~~-~---~~~~i~~~~  382 (457)
                           ..+...++.+.+|.++..|+.+++   ..++-+++.+++.+.|+.   +++ +.+... .. .   ..+.+.+..
T Consensus       281 ~~~~~~G~n~rmsel~AAig~~qL~~l~~---~~~~R~~~a~~y~~~L~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~  354 (438)
T PRK15407        281 YTYSHLGYNLKITDMQAAIGLAQLEKLPG---FIEARKANFAYLKEGLAS---LEDFLILPEATPNSDPSWFGFPITVKE  354 (438)
T ss_pred             ccccccccccCccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc---CCCccccCcCCCCCeeEEEEEEEEECC
Confidence                 112234788888999888887754   667777888888888877   333 222111 11 1   234455543


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEecccc-Ccccc--------C-C---------CCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSH-LDQEA--------K-K---------QKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~--------~-~---------~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      ...     ....++.+.|.++||..+.... |....        . .         ....+-+.++..+|++|+++++++
T Consensus       355 ~~~-----~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~  429 (438)
T PRK15407        355 DAG-----FTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEK  429 (438)
T ss_pred             cCC-----CCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHH
Confidence            210     0346899999999997654321 11100        0 0         133477777777899999999999


Q ss_pred             HHHHHH
Q psy15447        444 LCKSHD  449 (457)
Q Consensus       444 l~~~~~  449 (457)
                      |+++++
T Consensus       430 i~~~~~  435 (438)
T PRK15407        430 IEEFFG  435 (438)
T ss_pred             HHHHHh
Confidence            998875

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.87  E-value=1.6e-19  Score=179.28  Aligned_cols=292  Identities=17%  Similarity=0.191  Sum_probs=199.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEec-CCCHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFK-HNNMQ  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~-~~d~~  197 (457)
                      .++...++|+.++++.|.+.+++++||++|+..++.++.++||.|++....|+++.    ..+...|.++.+++ .+|++
T Consensus        67 ~~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e  146 (437)
T PRK05613         67 TNPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPE  146 (437)
T ss_pred             cChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHH
Confidence            46778999999999999999999999999999999988999999999988888764    33456688888886 55788


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.+.+           ++++|++|++.|++|.+.|+++|.++|+++|+++|+|.+++.|..-   .      .+ ..
T Consensus       147 ~l~~~l~~-----------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~---~------p~-~~  205 (437)
T PRK05613        147 SWQAAVQP-----------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV---R------PL-EL  205 (437)
T ss_pred             HHHHhCCc-----------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc---C------hH-Hh
Confidence            88887753           4578889999999999999999999999999999999998765431   1      11 13


Q ss_pred             CccEEEecCcccccCc----ccEEEecHHH-----------------------------------HHHHHhhCCcceecC
Q psy15447        278 EVDMIIGSLEHALGSV----GGFCVGSSYI-----------------------------------IEHHRLSGSGYCFSA  318 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~----gG~v~~~~~~-----------------------------------~~~~~~~~~~~~~~~  318 (457)
                      ++|+++.|++|.+++.    ||+++.+...                                   ....+.. .....+.
T Consensus       206 GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~G~  284 (437)
T PRK05613        206 GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAG-LLRDTGA  284 (437)
T ss_pred             CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHH-HHHhcCC
Confidence            4599999999999753    5777653220                                   0000000 1113455


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc---------------CCCCeEEEEecCC
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---------------RDTPLKYLYLQKS  383 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~  383 (457)
                      .++|..|+..+..|+-+.   .++++..+++..+.+.|++++.+..+..++.               ..+.++.+.++.+
T Consensus       285 ~~~p~~a~l~~rgl~TL~---lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~  361 (437)
T PRK05613        285 TLSPFNAWVTAQGLDTLS---LRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGG  361 (437)
T ss_pred             CCCHHHHHHHHcccCcHH---HHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCC
Confidence            689999888877766553   4778889999999999998553332222111               1245778887643


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEecc------ccCcc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCP------SHLDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .      ..+.++++.|.=-.+....+      .+|..            .....++.+|+++.+.    +.+.+++-|+
T Consensus       362 ~------~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGlE----~~~dLi~Dl~  431 (437)
T PRK05613        362 K------DEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGIE----DIDDIIADLE  431 (437)
T ss_pred             H------HHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHH
Confidence            2      14556666654211111111      11211            0112256899999864    4555555555


Q ss_pred             HHHH
Q psy15447        446 KSHD  449 (457)
Q Consensus       446 ~~~~  449 (457)
                      ++++
T Consensus       432 ~Al~  435 (437)
T PRK05613        432 GGFA  435 (437)
T ss_pred             HHHh
Confidence            5544

>KOG1405|consensus

Probab=99.86  E-value=3e-20  Score=168.85  Aligned_cols=349  Identities=14%  Similarity=0.155  Sum_probs=225.4

Q ss_pred             eecCCCcEEE-ECCeeeEEee---cCCccCCCCChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc--C
Q psy15447         67 VDQKSGYIVN-INGIPCINFA---THNYLSFVENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM--G  139 (457)
Q Consensus        67 i~~~~g~~~~-~~G~~~id~~---s~~~l~~~~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~--g  139 (457)
                      -++.-|.|+. +|||.++|.-   |.-++|+. ||.+.+++.+ +..+.-+.-..-.. +-..+..+.+.+.|-.+.  |
T Consensus        62 YEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn-~P~LvK~a~~p~~~~~lvnRPALg~-fP~kd~~~~l~~~ll~~APKG  139 (484)
T KOG1405|consen   62 YEKSIGNYLVDVDGNRLLDVYSQISSVPLGYN-NPALVKAAQQPQNATMLVNRPALGN-FPPKDFAEKLRQSLLSIAPKG  139 (484)
T ss_pred             hhhhcCceEEecCCCeeehhhhhhcccccCCC-CHHHHHHhcChHHHHHHhccccccC-CChhhHHHHHHHHHHhhCcch
Confidence            3467899999 6999999963   45678886 8888777643 22221111100001 112455555666555554  3


Q ss_pred             CCcEEEecccHHHHHHHHHhhc------C-------------------CCC----EEEEeCcccHHHHHHHHhcCCeEE-
Q psy15447        140 LEETALYSFGFSTSASAIAAYV------K-------------------RND----AVFVDENINFAIQTGLIASRCKVQ-  189 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~------~-------------------~gd----~v~~~~~~h~~~~~~~~~~g~~~~-  189 (457)
                      .+.+...-+|+.||+.|+++..      +                   ||.    ++......|+.++..++....+.+ 
T Consensus       140 ~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIH  219 (484)
T KOG1405|consen  140 QKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIH  219 (484)
T ss_pred             HHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCcccc
Confidence            5566777899999999987531      1                   221    233455567777766554432211 


Q ss_pred             E-----------------ec------CC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----h
Q psy15447        190 Y-----------------FK------HN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----L  236 (457)
Q Consensus       190 ~-----------------~~------~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l  236 (457)
                      .                 +|      +|      .++++|++|.+....     ..+++++|+||+++.+|.-..    +
T Consensus       220 KldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k-----~~pVaaiIvEPIQsEGGDnhaSp~Ff  294 (484)
T KOG1405|consen  220 KLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKK-----KKPVAAIIVEPIQSEGGDNHASPDFF  294 (484)
T ss_pred             ccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhc-----CCCeEEEEeechhccCCCccCCHHHH
Confidence            1                 11      11      366788888776521     246889999999999887632    8


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      +.|+++|+|||+.+|+||+|..|  |.+|. |..++|+++ .-+|++  ||||-|-. |||.-..+     ++.......
T Consensus       295 ~kLrdi~~Kh~v~fivDEVQTGg--GaTGk~WaHehw~l~-~PpD~v--TFSKK~q~-gGffh~~~-----frpn~pYri  363 (484)
T KOG1405|consen  295 RKLRDITKKHGVAFIVDEVQTGG--GATGKFWAHEHWNLD-SPPDVV--TFSKKFQT-GGFFHDEE-----FRPNEPYRI  363 (484)
T ss_pred             HHHHHHHHhcCeEEEeeeeecCC--CccCceeeehhcCCC-CCccce--ehhhhhhc-CccccCcc-----cCCCchHHH
Confidence            99999999999999999998643  55565 456999986 456887  89998843 55654332     221111011


Q ss_pred             e-cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccccc-CCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447        316 F-SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT-QRFLVQGHRDTPLKYLYLQKSDDEVASKKLL  393 (457)
Q Consensus       316 ~-~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  393 (457)
                      | +....|.-.....+.++.++++ .+.++...-++.|.++|.+++.. ++.--..++.+.++.+.++++.       ..
T Consensus       364 fNTWmGdP~k~lll~~vv~~I~~~-~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~-------~R  435 (484)
T KOG1405|consen  364 FNTWMGDPSKNLLLEEVVQEIKRE-DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGS-------IR  435 (484)
T ss_pred             hhhhcCChHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChH-------HH
Confidence            1 1122454444444556666544 58899999999999998775422 2221112345667777777665       66


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..++..++-+|+-+...+         .-.+|+-|++..++...+-+++.++++++.
T Consensus       436 dk~i~~~~~nGv~~GGCg---------~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  436 DKLILIARLNGVNLGGCG---------DKSIRFRPSLVFRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             HHHHHHHHHcCceecccc---------cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence            788999999999775433         357999999999999999999999998764

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.86  E-value=1.4e-19  Score=192.38  Aligned_cols=306  Identities=12%  Similarity=0.094  Sum_probs=214.4

Q ss_pred             cccChHHHHHHHHHHHhhcCCCcEEEecccH----HHHHHHHHhhcCC-CC----EEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447        120 FYGTNVVHLDLENDIASFMGLEETALYSFGF----STSASAIAAYVKR-ND----AVFVDENINFAIQTGLIASRCKVQY  190 (457)
Q Consensus       120 ~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~----~a~~~ai~a~~~~-gd----~v~~~~~~h~~~~~~~~~~g~~~~~  190 (457)
                      ..|..+...++++.|++++|.+.+.|..+++    +|+..+++++.++ ||    +|+++...|++........|.++..
T Consensus       563 ~~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~  642 (993)
T PLN02414        563 AQGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV  642 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence            4566788899999999999998888776655    6888899988765 77    8999999999999888889999988


Q ss_pred             ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                      ++.+     |+++|++.++...        +++++|++..+++.+|...|+++|.++|+++|+++++|.++..+..+..-
T Consensus       643 v~~d~~G~vDle~L~~~i~~~~--------~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~  714 (993)
T PLN02414        643 VGTDAKGNINIEELRKAAEAHK--------DNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTS  714 (993)
T ss_pred             eccCCCCCcCHHHHHHHHhccC--------CCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCC
Confidence            8763     8999999997533        36789999999999999999999999999999999999999765433211


Q ss_pred             CccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhC----Ccc----eec--CCCc--HH-HH
Q psy15447        266 HGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSG----SGY----CFS--ASLP--PF-LA  325 (457)
Q Consensus       266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~----~~~----~~~--~~~~--~~-~~  325 (457)
                              ....++|++++|.+|+|++      +| |+++.++.+...+....    .++    ..+  ++.+  +. .+
T Consensus       715 --------p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~a  786 (993)
T PLN02414        715 --------PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSA  786 (993)
T ss_pred             --------ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhH
Confidence                    1113569999999998852      22 77888887666553110    000    000  1111  22 11


Q ss_pred             HHHHHHHHHHhh---C--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKA---N--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTIC  397 (457)
Q Consensus       326 aaa~a~l~~~~~---~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~  397 (457)
                      ..+..++.++..   +  .+..++...++.|+++.|++   ..++.+.++ .+++   +.+.+..-..  .......++.
T Consensus       787 l~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~---~~~~~~~~~-~~~~~hEfv~~~~~l~~--~~g~~~~di~  860 (993)
T PLN02414        787 LILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG---HYPVLFRGK-NGTCAHEFIIDLRPFKN--TAGIEPEDVA  860 (993)
T ss_pred             HHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh---hCCccccCC-CCCeeeeEEEecccccc--ccCCCHHHHH
Confidence            233344444332   1  23366777899999999977   344444322 2232   1222221000  0001346799


Q ss_pred             HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++|++.||......+      +..+.+|++|+...|++|||++++++..+.+++.+
T Consensus       861 krL~d~Gihapt~~~------pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        861 KRLMDYGFHAPTMSW------PVPGTLMIEPTESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             HHHHHcCcEEeeecc------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999998755443      23689999999999999999999999999988864

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.86  E-value=4.2e-19  Score=163.29  Aligned_cols=299  Identities=17%  Similarity=0.201  Sum_probs=200.9

Q ss_pred             CCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeE
Q psy15447        113 GSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKV  188 (457)
Q Consensus       113 ~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~  188 (457)
                      ++..+|.   .++....||+++|.+-|--.++.++||..|+..+|..+.+.||.|+....-|+.+..    .++..|.++
T Consensus        53 G~iYsRi---~NPT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v  129 (426)
T COG2873          53 GNIYTRI---MNPTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV  129 (426)
T ss_pred             Cceeeec---cCchHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence            3334454   467778999999999998888999999999999999999999999988877766543    356679999


Q ss_pred             EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447        189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV  268 (457)
Q Consensus       189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~  268 (457)
                      .+++.+|++.+++.+++           ++++|++|++-||.+.+.++++|.++|+++|+.||+|...+...+-+     
T Consensus       130 ~fvd~~d~~~~~~aI~~-----------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~r-----  193 (426)
T COG2873         130 RFVDPDDPENFEAAIDE-----------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLCR-----  193 (426)
T ss_pred             EEeCCCCHHHHHHHhCc-----------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceecc-----
Confidence            99999999999999964           67899999999999999999999999999999999999865443321     


Q ss_pred             ccccCCCCCCccEEEecCcccccC----cccEEEecH--HHH---------------------H---------HHHhhCC
Q psy15447        269 TEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSS--YII---------------------E---------HHRLSGS  312 (457)
Q Consensus       269 ~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~--~~~---------------------~---------~~~~~~~  312 (457)
                          .++ .++||++.|++|.+|+    .||.++-..  ++.                     +         +.|... 
T Consensus       194 ----P~~-hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~-  267 (426)
T COG2873         194 ----PIE-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQL-  267 (426)
T ss_pred             ----hhh-cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHH-
Confidence                111 4569999999999974    356654221  111                     0         000000 


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---------------CCCeEE
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---------------DTPLKY  377 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---------------~~~~~~  377 (457)
                      -..++.+++|..+...+..++-+   .-+++|..+|+..+.+.|+.++...++...+-.               .+.++.
T Consensus       268 lRDlGa~lsPfnAfl~lqGlETL---~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vlt  344 (426)
T COG2873         268 LRDLGATLSPFNAFLLLQGLETL---SLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLT  344 (426)
T ss_pred             HHhcccccCcHHHHHHHhchhhh---HHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEE
Confidence            01123445666555554444433   236788889999999999985544444332211               144677


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHH------HcC----eeEeccccCcc--------ccCCCCCeEEEEecCCCCHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCI------QAG----FAITCPSHLDQ--------EAKKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~------~~G----i~v~~~~~~~~--------~~~~~~~~lRi~~~~~~t~edi~~  439 (457)
                      +.+++..+      ...++++.|.      .-|    +.+.|..--..        .....++.+|+++..    ||++.
T Consensus       345 F~~kgg~e------a~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----Ed~~D  414 (426)
T COG2873         345 FGVKGGYE------AGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDD  414 (426)
T ss_pred             EEecChHH------HHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----CCHHH
Confidence            77776632      2334444332      112    33333211000        112337789999964    55666


Q ss_pred             HHHHHHHHHH
Q psy15447        440 LIETLCKSHD  449 (457)
Q Consensus       440 ~~~~l~~~~~  449 (457)
                      ++.-|+++++
T Consensus       415 iiaDl~qAl~  424 (426)
T COG2873         415 IIADLEQALE  424 (426)
T ss_pred             HHHHHHHHHh
Confidence            6666666554

>PLN02271 serine hydroxymethyltransferase

Probab=99.86  E-value=5.6e-19  Score=174.54  Aligned_cols=324  Identities=13%  Similarity=0.105  Sum_probs=210.4

Q ss_pred             ChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHH---H-HHHHhhcCCCc----E-EEecccHHHHHHHHHhhcCCCC
Q psy15447         96 NPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDL---E-NDIASFMGLEE----T-ALYSFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        96 ~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l---~-~~la~~~g~~~----~-i~~~sG~~a~~~ai~a~~~~gd  165 (457)
                      .|.+.++.-..+ .+|..++.+.|.+.|. +...++   + ++..++||.+.    + +-.-||+.||.+++.++++|||
T Consensus       161 S~av~~algS~ltnkYaEG~pG~Ryy~G~-~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD  239 (586)
T PLN02271        161 CRAVMEALGSHLTNKYSEGMPGARYYTGN-QYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGD  239 (586)
T ss_pred             CHHHHHHhcCcccccCCCCCCCCcCCCCC-hhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCC
Confidence            355666555444 3466677777765554 333333   3 33444778554    2 4456999999999999999999


Q ss_pred             EEEEeCcccHHHHHH---------HHhcCCe--EEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        166 AVFVDENINFAIQTG---------LIASRCK--VQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       166 ~v~~~~~~h~~~~~~---------~~~~g~~--~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      .|+.-+..|+.....         +...|..  ..+|+.+      |.+++++....          .++++|++.+..+
T Consensus       240 ~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~----------~rPKLII~g~Say  309 (586)
T PLN02271        240 RIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALD----------FRPKILICGGSSY  309 (586)
T ss_pred             EEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhh----------cCCeEEEECchhc
Confidence            999866665543321         1223432  3343333      78889886544          4567888866554


Q ss_pred             CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHH-----
Q psy15447        229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSY-----  302 (457)
Q Consensus       229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~-----  302 (457)
                      +  ...|+++++++|+++|++|++|.+|..|.+..   +.   +..+-+.+|++++|.+|+| |+.||++..+++     
T Consensus       310 p--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~---g~---~~sP~~~aDvvt~TTHKtLrGPrGG~I~~r~~~~~~~  381 (586)
T PLN02271        310 P--REWDYARFRQIADKCGAVLMCDMAHISGLVAA---KE---CVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGPKLRK  381 (586)
T ss_pred             c--CcCCHHHHHHHHHHcCCEEEEECccccccccc---Cc---CCCCCcCCcEEEeCCcccCCCCCceEEEecccccccc
Confidence            4  56789999999999999999999999887642   11   1111135799999999999 778888877653     


Q ss_pred             ---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        303 ---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       303 ---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                                     +.+.+...-.+ .+.++.+....|+...+++...  +..+..+++.+|++.|.+.|.+    .|+
T Consensus       382 ~g~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~----~G~  456 (586)
T PLN02271        382 QGMLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLR----RKC  456 (586)
T ss_pred             cCCccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH----CCC
Confidence                           33444333333 2222323333344444555432  2245788899999999999998    788


Q ss_pred             EEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC----CCCHHHHHHH
Q psy15447        366 LVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI----SHTEQDMNSL  440 (457)
Q Consensus       366 ~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~----~~t~edi~~~  440 (457)
                      +++.. .+++++++.+....      .....+.+.|.+.||.+....-|....+..++.+||..+.    ...++|++++
T Consensus       457 ~vv~ggTdnHlvLvDl~~~g------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~i  530 (586)
T PLN02271        457 RLVTGGTDNHLLLWDLTTLG------LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETI  530 (586)
T ss_pred             eEeeCCCCcceeeecCcccC------CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHH
Confidence            87643 45677877764321      0233455566667999876555533333346789998654    3567999999


Q ss_pred             HHHHHHHHH
Q psy15447        441 IETLCKSHD  449 (457)
Q Consensus       441 ~~~l~~~~~  449 (457)
                      .+.|.++++
T Consensus       531 A~~i~~~~~  539 (586)
T PLN02271        531 ADFLLRAAQ  539 (586)
T ss_pred             HHHHHHHHh
Confidence            999988876

>KOG0634|consensus

Probab=99.85  E-value=1.9e-18  Score=161.85  Aligned_cols=306  Identities=13%  Similarity=0.114  Sum_probs=206.6

Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCcc
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      .+++++.+.+...+++.++.+||.|+++.+.+.+.+..++..|+++++++.+    ++|.|++.+..-.....+.| .+.
T Consensus       127 iiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~-~p~  205 (472)
T KOG0634|consen  127 IIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKP-KPH  205 (472)
T ss_pred             EEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCC-CCe
Confidence            3444455589999999999999999999999999999999999999988754    79999999987665433333 345


Q ss_pred             EEEEEecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCC--------C--C--c-----cccccCCCCCC
Q psy15447        219 KFIIVEGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGTLGST--------G--H--G-----VTEYFGVSTEE  278 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~--------g--~--~-----~~~~~~~~~~~  278 (457)
                      .+..+.+.+||||...++   ++|.+||+||++++|.||.|.+.-++..        .  .  .     .....+.+-++
T Consensus       206 vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdG  285 (472)
T KOG0634|consen  206 VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDG  285 (472)
T ss_pred             EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccc
Confidence            567788899999999886   5999999999999999999987665520        0  0  0     11223344566


Q ss_pred             ccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh------CcHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA------NPSLLTKLREKCN  350 (457)
Q Consensus       279 ~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~------~~~~~~~l~~~~~  350 (457)
                      ..|-+.||||-++  .+-||+.+++..++.+-..+...+-+  ++.+......+.++...+      ..+++..+.++..
T Consensus       286 rVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~--pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn  363 (472)
T KOG0634|consen  286 RVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSG--PSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRN  363 (472)
T ss_pred             cEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecC--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6788999999995  45599999998887765433222222  222322333333332221      1234455556666


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCeEEEEecCCc-ch-HHHHHHHHHHHHHHHHcCeeEeccccCccc-cCCCC-CeEEE
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD-DE-VASKKLLQTICDMCIQAGFAITCPSHLDQE-AKKQK-PSIRI  426 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~-~~lRi  426 (457)
                      .+...|.+.-...-+++..+..|.++|+.++-.. +. ..-......+...+.++||.+.++..+.+. ..... -++|+
T Consensus       364 ~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRl  443 (472)
T KOG0634|consen  364 ALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRL  443 (472)
T ss_pred             HHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEE
Confidence            6666665521111256666778999999986110 00 000012234566677889999998877663 11212 38999


Q ss_pred             EecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        427 TCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++. ...+++++.++.+..++++--
T Consensus       444 s~a~-a~~e~l~~g~~rf~~~ike~f  468 (472)
T KOG0634|consen  444 SIAF-AEPEKLDEGIERFGSVIKEHF  468 (472)
T ss_pred             Eeec-CCHHHHHHHHHHHHHHHHHHh
Confidence            9976 467899999999988887653

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.85  E-value=1.2e-18  Score=162.20  Aligned_cols=339  Identities=16%  Similarity=0.146  Sum_probs=226.2

Q ss_pred             eeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccC--hHHHHHHHH-HHHhhcCCCcE-EEecccHHHHH
Q psy15447         81 PCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGT--NVVHLDLEN-DIASFMGLEET-ALYSFGFSTSA  154 (457)
Q Consensus        81 ~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~--~~~~~~l~~-~la~~~g~~~~-i~~~sG~~a~~  154 (457)
                      +.|++. |=|+    -+|.+.+|.-..+ .+|.-++.+-|.+.|.  -+..+.|+. +..++||.+.+ +--.||+.||.
T Consensus        27 ~~ieLIASEN~----~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~  102 (413)
T COG0112          27 EHIELIASENF----TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQ  102 (413)
T ss_pred             hceeeeecccc----CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHHHH
Confidence            445553 4343    2588998887777 4688888877775553  233334433 34447898866 55679999999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHH---HHHhcCCe--EEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQT---GLIASRCK--VQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~---~~~~~g~~--~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +++.++.+|||.|+--+..|+..+.   .+..+|..  .+.++.+      |.|++++..++.+          +++||.
T Consensus       103 av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k----------PK~ii~  172 (413)
T COG0112         103 AVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK----------PKLIIA  172 (413)
T ss_pred             HHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhC----------CCEEEE
Confidence            9999999999999887766655332   23344432  3333322      7899999988753          356665


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH-
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS-  301 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~-  301 (457)
                      -.  +.--...|+++++++|++.|++|++|-+|-.|..- .|  .  +.+--| ..|++++|.||+| |+.||.+.+++ 
T Consensus       173 G~--SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA-~G--~--~p~P~~-~AdvVTtTTHKTlrGPrGG~Il~~~e  244 (413)
T COG0112         173 GG--SAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIA-GG--V--HPNPLP-HADVVTTTTHKTLRGPRGGIILTNDE  244 (413)
T ss_pred             Cc--cccccccCHHHHHHHHHHhCceEEehHHHHHHHHh-cc--c--CCCCCC-ccceEeCCcccCCCCCCceEEEeccH
Confidence            31  12234678999999999999999999999766542 11  1  111112 3799999999999 78899999985 


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLY  379 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~  379 (457)
                      ++...+...-.+...++...-..++.+.+.-+.++.. .+..+++.+|++.|.+.|.+    .|+.+.+. .+++++.+.
T Consensus       245 el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~----~G~~vvsGgTdnHl~lVD  320 (413)
T COG0112         245 ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKE----RGFKVVSGGTDNHLVLVD  320 (413)
T ss_pred             HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHH----cCCeEecCCccceEEEEE
Confidence            7877776544443344333333334444444444433 56788899999999999998    88888643 446778777


Q ss_pred             ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHh
Q psy15447        380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.... .     ...+..+.|.+.||.+....-|.. ..+.....+||..+..    ..++|++++.+.|.+++...
T Consensus       321 l~~~~-~-----~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~  391 (413)
T COG0112         321 LRSKG-L-----TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL  391 (413)
T ss_pred             cccCC-C-----CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence            76321 0     234455566667999876665544 2234467899987644    46789999999998888653

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.85  E-value=6.9e-19  Score=173.39  Aligned_cols=291  Identities=9%  Similarity=0.047  Sum_probs=197.8

Q ss_pred             hHHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCC-CCEEEEeCcccHHHHHH-H-HhcCC-eEEEecCCC
Q psy15447        124 NVVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKR-NDAVFVDENINFAIQTG-L-IASRC-KVQYFKHNN  195 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~-gd~v~~~~~~h~~~~~~-~-~~~g~-~~~~~~~~d  195 (457)
                      .+...+.++.++++++.+   ++++++ ||+.++..++..+.++ ++.++. ...|++.+.. + +..|. ++..++..+
T Consensus        47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~  125 (378)
T PRK03080         47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY  125 (378)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC
Confidence            577788999999999963   467675 8999999999888774 445555 5677776553 2 34566 666554321


Q ss_pred             --HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        196 --MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       196 --~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                        .-++++ ++           . ++.|.+.++.+.+|.+.|+++|.+  ++||+++++|.++++|...         .+
T Consensus       126 g~~~d~~~-i~-----------~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~p---------id  181 (378)
T PRK03080        126 GSLPDLSA-VD-----------F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALP---------LD  181 (378)
T ss_pred             CCCCCHhh-cC-----------C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCC---------CC
Confidence              111222 11           1 235788888899999999999999  8899999999999987542         23


Q ss_pred             CCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhCCcc-----------------ee---cCC-CcHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSGSGY-----------------CF---SAS-LPPFLAVAANK  330 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~~~~-----------------~~---~~~-~~~~~~aaa~a  330 (457)
                      +  +++|++++|.+|++++ .| |+++.+++.++.+.....++                 .+   +.+ .+.....+..+
T Consensus       182 v--~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~  259 (378)
T PRK03080        182 W--SKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLD  259 (378)
T ss_pred             H--HHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHH
Confidence            3  3479999999999964 55 88999998887764321100                 01   111 23333344467


Q ss_pred             HHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCC-CeEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447        331 ALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDT-PLKYLYLQKSDDEVASKKLLQTICDMCIQA  403 (457)
Q Consensus       331 ~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  403 (457)
                      +++++.+.   +.+.++.+++.+++++.|++   ..++.+...   ..+ .++.+.+++..     .....++...|.++
T Consensus       260 al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~---~~~~~~~~~~~~~~s~~i~~~~~~~~~-----~~~~~~~~~~l~~~  331 (378)
T PRK03080        260 QLDWANSIGGLDALIARTAANASVLYDWAEK---TPWATPLVADPATRSNTSVTLDFVDAQ-----AAVDAAAVAKLLRE  331 (378)
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccCccEEEEEcCCch-----HHHHHHHHHHHHHc
Confidence            88888653   45678888899999999988   344444321   123 46666665410     00223466777788


Q ss_pred             CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      |+.++.+.+.     ...+.+|++++..+|++||++++++|+++++.++..
T Consensus       332 ~i~v~~g~~~-----~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~~  377 (378)
T PRK03080        332 NGAVDIEPYR-----DAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKAA  377 (378)
T ss_pred             CCeecccccc-----CCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9888765432     124789999999999999999999999998877643

>PLN03032 serine decarboxylase; Provisional

Probab=99.85  E-value=2.4e-18  Score=166.94  Aligned_cols=310  Identities=9%  Similarity=0.014  Sum_probs=207.4

Q ss_pred             hhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cE--EEecccHHHHHHHHHhhc--CCCCEEEE
Q psy15447         97 PDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ET--ALYSFGFSTSASAIAAYV--KRNDAVFV  169 (457)
Q Consensus        97 p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~--i~~~sG~~a~~~ai~a~~--~~gd~v~~  169 (457)
                      +...+++.+.+.+ +|.....+.......+...++.+.+++++|.+  ..  +|+++|++||..++.+..  .++.+|++
T Consensus        37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~  116 (374)
T PLN03032         37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA  116 (374)
T ss_pred             hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence            3455666555542 33322222222245677788889999999864  33  888899999999887654  24568999


Q ss_pred             eCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        170 DENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       170 ~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +...|.+..++++..+..+..++.     .|+++|++.+.+..        ..+.+|++...++++|.+.|+++|.++|+
T Consensus       117 s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~--------~~~~lvv~tagtt~tG~idpi~eI~~i~~  188 (374)
T PLN03032        117 SRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR--------DKPAILNVNIGTTVKGAVDDLDRILRILK  188 (374)
T ss_pred             CCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC--------CCCEEEEEEecCcCCccCCCHHHHHHHHH
Confidence            999999999999988876655543     28999999997532        24567777778889999999999999999


Q ss_pred             HcC-----cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhC-----C
Q psy15447        245 KYQ-----ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSG-----S  312 (457)
Q Consensus       245 ~~g-----~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~-----~  312 (457)
                      +||     +++++|.+++++...-...  ...++.. ..+|.+..|.||.+| +.| |+++.++...+.+....     .
T Consensus       189 ~~g~~~~~~~lHvDaA~gg~~~p~~~~--~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~  265 (374)
T PLN03032        189 ELGYTEDRFYIHCDGALFGLMMPFVSR--APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSR  265 (374)
T ss_pred             HhCCCCCCeeEEEEccchhhhhhccCC--CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCC
Confidence            996     5999999998765421100  0112222 357899999999998 444 77777776665442211     1


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASK  390 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  390 (457)
                      .++..++-+...++..-++|+.+..+  .++.++..++++++.+.|++    .++.+...+...++.+..+...      
T Consensus       266 d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~p~~~~V~f~~~~~~------  335 (374)
T PLN03032        266 DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE----AGLTCRLNELSSTVVFERPMDE------  335 (374)
T ss_pred             CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEEECCCceEEEEcCCCcH------
Confidence            12233333333334444455554332  45678888899999999998    5777766666666655433211      


Q ss_pred             HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                          .     ..+|-.+.+.          .+.+++++...+|++.+|++++-|++
T Consensus       336 ----~-----~~~~w~l~~~----------~~~~hi~vm~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        336 ----A-----FIKKWQLACE----------GDIAHVVVMPNVTVEKLDEFVEELVE  372 (374)
T ss_pred             ----h-----Hhheeeeccc----------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence                1     2245444432          25899999888999999999998865

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.85  E-value=2.2e-18  Score=184.47  Aligned_cols=352  Identities=10%  Similarity=0.084  Sum_probs=225.9

Q ss_pred             CeeeEEeecCCccCCCCCh-hhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--c--EEEecccHHH
Q psy15447         79 GIPCINFATHNYLSFVENP-DIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--E--TALYSFGFST  152 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p-~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~--~i~~~sG~~a  152 (457)
                      +.-|+|.++..+   . .| .+.+++.+.+..+...+. .+....-..+..++.++.+++++|.+  +  ++|++++++|
T Consensus        34 ~~iYLD~Aatt~---~-~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~a  109 (805)
T PLN02724         34 GVVYLDHAGATL---Y-SESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAA  109 (805)
T ss_pred             CCEeEeCCCCCC---C-CHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHH
Confidence            356888776432   1 23 455555455554322222 11111224567889999999999963  3  3566677788


Q ss_pred             HHHHHHhh-cCCCCEEEEeCcccHHHHHHHH---hcCCeEEEecCC-----------CH----HHHHHHHHh-hchhccc
Q psy15447        153 SASAIAAY-VKRNDAVFVDENINFAIQTGLI---ASRCKVQYFKHN-----------NM----QHLEELLRQ-QDERDTL  212 (457)
Q Consensus       153 ~~~ai~a~-~~~gd~v~~~~~~h~~~~~~~~---~~g~~~~~~~~~-----------d~----~~le~~l~~-~~~~~~~  212 (457)
                      +..+...+ .++||.|++....|.+......   ..|.++.+++.+           ++    +++++.++. ...  ..
T Consensus       110 lnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~--~~  187 (805)
T PLN02724        110 LKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQK--RE  187 (805)
T ss_pred             HHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhcc--cc
Confidence            88777776 5789999998888887664432   347777776543           11    334443210 000  00


Q ss_pred             CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--------CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEe
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--------QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIG  284 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--------g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~  284 (457)
                      ...+++++|++.++.|.+|.+.|++.|.++++..        ++++++|.+|+.|...         .++...++|+++.
T Consensus       188 ~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~p---------iDv~~~~~Dfl~~  258 (805)
T PLN02724        188 DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSP---------PDLSRYPADFVVV  258 (805)
T ss_pred             ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCC---------CChhhcCCCEEEE
Confidence            0124557999999999999999999876665532        3689999999876542         2333346799999


Q ss_pred             cCccccc-Ccc-cEEEecHHHHHHHHhhCCcc---------------------ee-cCCCcHHHHHHHHHHHHHHhhC--
Q psy15447        285 SLEHALG-SVG-GFCVGSSYIIEHHRLSGSGY---------------------CF-SASLPPFLAVAANKALHLLKAN--  338 (457)
Q Consensus       285 s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~aaa~a~l~~~~~~--  338 (457)
                      |++|.+| +.| |+++.++++.+.+.....+.                     .| .++.+....++..++++++.+.  
T Consensus       259 S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~  338 (805)
T PLN02724        259 SFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTI  338 (805)
T ss_pred             ecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhCh
Confidence            9999998 444 88888887776654321100                     01 2345666666777888888763  


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccc---cCCeEEeccC--------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKV---TQRFLVQGHR--------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI  407 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~---~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v  407 (457)
                      +...++.+++.+++.+.|+++..   .+++.+.++.        .++++.+.+.+.....   .....+...+.++||.+
T Consensus       339 ~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~---v~~~~v~~l~~~~gI~v  415 (805)
T PLN02724        339 SAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSW---VGHREVEKLASLSGIQL  415 (805)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCE---eCHHHHHHHHHhcCcEE
Confidence            45678899999999999988321   1146665432        4678888776532100   01223444445679999


Q ss_pred             eccccCccc---c---------------------------CCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        408 TCPSHLDQE---A---------------------------KKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       408 ~~~~~~~~~---~---------------------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      +.+.+|...   .                           ....+.+|+|+...+|.+|||+++++|++..
T Consensus       416 R~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~  486 (805)
T PLN02724        416 RTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF  486 (805)
T ss_pred             eeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence            998887641   0                           0123789999999999999999999999865

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.84  E-value=1.5e-19  Score=172.22  Aligned_cols=219  Identities=14%  Similarity=0.119  Sum_probs=156.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec---------
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFK---------  192 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~---------  192 (457)
                      ......++++.+|+++|.+.+++++ ++++++..++.+++++||.|++++++|.+...++...|.++.+++         
T Consensus        57 ~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~  136 (294)
T cd00615          57 PTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGI  136 (294)
T ss_pred             CChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCc
Confidence            4566789999999999998888755 456889999999999999999999999999999999998877653         


Q ss_pred             --CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCCccc
Q psy15447        193 --HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGHGVT  269 (457)
Q Consensus       193 --~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~~~~  269 (457)
                        ..|++++++.+++.         ++++++++.++ +++|.+.|+++|.++|++||+++|+||+|+... ++...... 
T Consensus       137 ~~~i~~~~l~~~l~~~---------~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~-  205 (294)
T cd00615         137 AGGIPPETFKKALIEH---------PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS-  205 (294)
T ss_pred             CCCCCHHHHHHHHHhC---------CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcc-
Confidence              24789999988652         23455555555 578999999999999999999999999987432 21111110 


Q ss_pred             cccCCCCCCccEEEecCcccccC-c-ccEEEecHHHH--HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHH
Q psy15447        270 EYFGVSTEEVDMIIGSLEHALGS-V-GGFCVGSSYII--EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTK  344 (457)
Q Consensus       270 ~~~~~~~~~~Di~~~s~sK~lg~-~-gG~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~  344 (457)
                          ....++|+++.|++|++++ . ||++..+++..  +.+.... ....+++++....++..++++++.+ ..+++++
T Consensus       206 ----~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~-~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~  280 (294)
T cd00615         206 ----AAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL-NLHQSTSPSYLILASLDVARAMMALEGKELVEE  280 (294)
T ss_pred             ----hhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH-HHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence                1113569999999999964 2 45554443321  2222111 1122344555666666677776643 3567888


Q ss_pred             HHHHHHHHHHHhh
Q psy15447        345 LREKCNTMHSLLS  357 (457)
Q Consensus       345 l~~~~~~l~~~L~  357 (457)
                      +.++.+++++.|+
T Consensus       281 ~~~~~~~~r~~l~  293 (294)
T cd00615         281 LIELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHHh
Confidence            8899999988775

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.83  E-value=2.2e-18  Score=168.33  Aligned_cols=243  Identities=14%  Similarity=0.140  Sum_probs=175.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH----HHHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ----TGLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~----~~~~~~g~~~~~~~~~d~~~  198 (457)
                      .++...+||++++++.|.+.++.++||+.|+..++.++.++||.|++....|+.+.    ..+...|.++..++.++.+.
T Consensus        62 ~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~  141 (384)
T PRK06434         62 GNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNS  141 (384)
T ss_pred             CChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhh
Confidence            46778999999999999999999999999999999999999999998776555444    44556788888887765555


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      ++  +..          +++++|++|.+.|+++.+.|+++|.++|++++  +++|.+++.+..++   .    .+   ..
T Consensus       142 ~~--l~~----------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~---p----l~---~g  197 (384)
T PRK06434        142 LD--FDP----------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQN---P----LD---LG  197 (384)
T ss_pred             ee--ecC----------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCC---c----hh---cC
Confidence            54  221          35789999999999999999999999999999  46699975433221   1    11   24


Q ss_pred             ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      .|+++.|.+|.+++    .||++++ ++++.+.++...  ..++..++|+.++.++..|+.+.   .++++.++++..+.
T Consensus       198 aDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~--~~~G~~~~~~~A~l~~~gL~tL~---~R~~r~~~~a~~~a  272 (384)
T PRK06434        198 ADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR--KTLGSNPDPIQAYLALRGLKTLG---LRMEKHNKNGMELA  272 (384)
T ss_pred             CCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH--HhcCCCCCHHHHHHHHhCCCcHH---HHHHHHHHHHHHHH
Confidence            58999999999964    2677766 455656554321  13455678888887777766553   47888899999999


Q ss_pred             HHhhcccccCCeEEec--------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        354 SLLSQHKVTQRFLVQG--------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      +.|++++.+..+..++        ...+.++.+.+++..       .+.++.+.|.
T Consensus       273 ~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~-------~~~~f~~~l~  321 (384)
T PRK06434        273 RFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSME-------DVHKFIRNLE  321 (384)
T ss_pred             HHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHH-------HHHHHHHhCC
Confidence            9999854332222211        123678888886422       4455666554

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.82  E-value=1.1e-17  Score=166.18  Aligned_cols=313  Identities=14%  Similarity=0.115  Sum_probs=198.2

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccH
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINF  175 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~  175 (457)
                      ++++.+++.+.++.|+....... .....+.+..+++.+++++|.+.+++++||+.|+..++.+ ..+||.|++.+..|.
T Consensus        94 ~~~vieAv~~~~~~y~~l~~~l~-~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v  171 (454)
T TIGR00474        94 AEEAIEAVTDAARGYSNLEYDLE-TGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELV  171 (454)
T ss_pred             CHHHHHHHHHHHhcccchhcccc-ccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhh
Confidence            68899999999987652111000 0112355789999999999999999999999999888854 688999999887653


Q ss_pred             ------HHHHHHHhcCCeEEEecC---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC--CC--CCCChHHHHHH
Q psy15447        176 ------AIQTGLIASRCKVQYFKH---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN--SA--DICPLKDILSL  242 (457)
Q Consensus       176 ------~~~~~~~~~g~~~~~~~~---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~--~G--~i~~l~~i~~l  242 (457)
                            .+...++..|.++..+++   .+++++++++.           +++++|++++..|+  .|  .+.|+++|.++
T Consensus       172 ~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~-----------~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~l  240 (454)
T TIGR00474       172 EIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAIT-----------ENTALLLKVHTSNYRIVGFTEEVSIAELVAL  240 (454)
T ss_pred             hhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcC-----------cCCEEEEEEccCcccccCCCCCCCHHHHHHH
Confidence                  233456778999999876   46777777764           35678888887775  46  57899999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCC-cccc---ccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCccee-
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGH-GVTE---YFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSGYCF-  316 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~-~~~~---~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~~~~-  316 (457)
                      |++||+++++|.+  .|.++..+. ++..   .......++|+++.|.+|++|+ .+|+++++++.++.++.....-.. 
T Consensus       241 a~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~~l~r~lr  318 (454)
T TIGR00474       241 GREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKNPLTRALR  318 (454)
T ss_pred             HHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhchhHHHHh
Confidence            9999999999974  455544321 1110   0111124679999999999964 579999999888766432210000 


Q ss_pred             -------------cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCe--EEeccC----C-----
Q psy15447        317 -------------SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF--LVQGHR----D-----  372 (457)
Q Consensus       317 -------------~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~--~~~~~~----~-----  372 (457)
                                   ...+.|..+...+..++.+.   ...+++++++..+.+.|++... +++  ++....    +     
T Consensus       319 ~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~---~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~ggg~~p~  394 (454)
T TIGR00474       319 VDKLTLAALEATLRLYLDPEKALEKIPTLRMLT---QSPEELRARAERLAKRLKAALG-PGFELEIVPGLSQVGGGSLPD  394 (454)
T ss_pred             hChHHHHHHHHHHHHHhCchhhhhhchHHHHhc---cCHHHHHHHHHHHHHHHHhhcc-CCceEEEEEcCCcccCCCCcC
Confidence                         00112222222222222222   1345677788888888866200 222  332211    0     


Q ss_pred             --CCeEEEEecCCcchHHHHHHHHHHHHHHHHcC--eeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        373 --TPLKYLYLQKSDDEVASKKLLQTICDMCIQAG--FAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       373 --~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G--i~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                        -+-+.+.+....      ..+.++.+.|++..  |+.+..          .+.+.+-+ -++.++|++.+++++
T Consensus       395 ~~l~~~~v~~~~~~------~~~~~l~~~lr~~~~~ii~r~~----------~~~~~ld~-r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       395 ERLPSYAVTLTPDG------LSAEKLEARLRELPPPIIGRIE----------DDRFLLDL-RTLLEDEEELLIEAL  453 (454)
T ss_pred             CCCCeEEEEEecCC------CCHHHHHHHHhcCCCCEEEEEE----------CCEEEEEe-CcCCHHHHHHHHHHh
Confidence              133444443221      14567888888654  555421          35677766 346889999988876

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK15029 arginine decarboxylase; Provisional

Probab=99.82  E-value=1.1e-17  Score=173.37  Aligned_cols=311  Identities=14%  Similarity=0.139  Sum_probs=199.3

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------  194 (457)
                      .....+.++..|+++|.++++|.++|+ .+|.+++.+++++||.|++++.+|-+...++.++|+..+++...        
T Consensus       204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~  283 (755)
T PRK15029        204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG  283 (755)
T ss_pred             CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence            456678889999999999999988887 57888999999999999999999999999999999988876421        


Q ss_pred             --C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccc-ccccCCCC
Q psy15447        195 --N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF-GTLGSTGH  266 (457)
Q Consensus       195 --d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~-g~~g~~g~  266 (457)
                        +     ++.+++.++++........+...+++++.|-+  .|.+.++++|.++|+++|+.|++||||+. ..+.+   
T Consensus       284 ~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~---  358 (755)
T PRK15029        284 PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP---  358 (755)
T ss_pred             CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeCHHHHHHHHHhcCCeEEEECccccccccCc---
Confidence              3     88999999875421100111112455555544  59999999999999999999999999963 22222   


Q ss_pred             ccccccCC-----CCCCcc-EEEecCcccccC--cccEEEecHH--HH--HHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447        267 GVTEYFGV-----STEEVD-MIIGSLEHALGS--VGGFCVGSSY--II--EHHRLSGSGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       267 ~~~~~~~~-----~~~~~D-i~~~s~sK~lg~--~gG~v~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      .+..+..+     ...++| +++.|.||.+++  .++++-.+..  .+  +.++.. .....|+|++.+.+|..-.+.++
T Consensus       359 ~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~-l~~~qSTSPSY~LmASLD~ar~~  437 (755)
T PRK15029        359 IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQA-YMMHATTSPLYAICASNDVAVSM  437 (755)
T ss_pred             cccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHH-HHHHcCCCcHHHHHHHHHHHHHH
Confidence            11111222     114567 999999999964  2344432211  11  222211 11223445555555555566666


Q ss_pred             Hhh--CcHHHHHHHHHHHHHHHHhhcccccC---C------------------------------------eEEecc--C
Q psy15447        335 LKA--NPSLLTKLREKCNTMHSLLSQHKVTQ---R------------------------------------FLVQGH--R  371 (457)
Q Consensus       335 ~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~---~------------------------------------~~~~~~--~  371 (457)
                      ++.  ..++.++..+....+++.++++....   +                                    +.+..+  .
T Consensus       438 m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (755)
T PRK15029        438 MDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES  517 (755)
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeeeccccc
Confidence            764  45677788888888988887632100   0                                    111110  0


Q ss_pred             --C-----------CCe-EEEEecC-Ccch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447        372 --D-----------TPL-KYLYLQK-SDDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       372 --~-----------~~~-~~i~~~~-~~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~  434 (457)
                        +           -|+ +.+.... +...  ...+.-+..+.+.|.++||.+-...         ...+-+.++...|+
T Consensus       518 ~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~vL~l~s~g~t~  588 (755)
T PRK15029        518 WHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIMFLFSMGVTR  588 (755)
T ss_pred             ccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCH
Confidence              0           011 1111111 1100  0011123468888888899987544         35677788888999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        435 QDMNSLIETLCKSHD  449 (457)
Q Consensus       435 edi~~~~~~l~~~~~  449 (457)
                      +++++++++|.++.+
T Consensus       589 ~~~~~L~~aL~~~~~  603 (755)
T PRK15029        589 GKWGTLVNTLCSFKR  603 (755)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999998754

>KOG1549|consensus

Probab=99.82  E-value=6.7e-18  Score=160.29  Aligned_cols=337  Identities=16%  Similarity=0.208  Sum_probs=205.8

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC--hHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT--NVVHLDLENDIASFMGLE--ETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~a  156 (457)
                      -|+|..+..+    -+|+|.+|+.+.+..+- +...++ .||.  .+..++.++.+|++.+.+  +++|++++++++..+
T Consensus        45 vyld~~at~p----~~~~Vldam~~~~~~~~-~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv  118 (428)
T KOG1549|consen   45 VYLDNQATGP----MDPRVLDAMLPYLLEYL-GNPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV  118 (428)
T ss_pred             EEEecCcCCC----CCHHHHHHHHHHHHHhh-cCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence            4566555433    36899999999887743 222233 2443  344788899999999955  467777888999999


Q ss_pred             HHhhc-CCCC----EEEEeCcccHHHHHHHH---hcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        157 IAAYV-KRND----AVFVDENINFAIQTGLI---ASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       157 i~a~~-~~gd----~v~~~~~~h~~~~~~~~---~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      ++.+. ..+|    +|+.-...|.+...+++   -.|..+..+|.+     |.+.+++.|+           +++++|.+
T Consensus       119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-----------~~T~lv~I  187 (428)
T KOG1549|consen  119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-----------SKTRLVSI  187 (428)
T ss_pred             HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-----------CCceEEEE
Confidence            88753 2344    89999999998776654   446777766654     4566666664           47799999


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY  302 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~  302 (457)
                      .+++|+.|.+.|+++|.++|+++|+.+++|.+|+.|...         .++...++|++..+.||++|++| |++..++.
T Consensus       188 ~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~---------vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~  258 (428)
T KOG1549|consen  188 MHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP---------VDVQELNADFLSISAHKIYGPPGIGALYVRRK  258 (428)
T ss_pred             EecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc---------ccHHHcCchheeeecccccCCCcceEEEEccC
Confidence            999999999999999999999999999999999976542         34444567999999999999875 88777751


Q ss_pred             HHHHHHh----hCCc---ceecCCCcHHHHHHHHHHHHHHhhCcHH-HHHHHHHHHHHHHHhhcccccCCeEEeccCCC-
Q psy15447        303 IIEHHRL----SGSG---YCFSASLPPFLAVAANKALHLLKANPSL-LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT-  373 (457)
Q Consensus       303 ~~~~~~~----~~~~---~~~~~~~~~~~~aaa~a~l~~~~~~~~~-~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~-  373 (457)
                       ...++.    .+.+   -..+++.....+...-++.++..+.... ...+.++...+...+...  .+.+.+.+++.. 
T Consensus       259 -~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~--~~~~~~~G~~~~~  335 (428)
T KOG1549|consen  259 -RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQS--LPEVTLNGSGKSR  335 (428)
T ss_pred             -CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhh--CchhhccCCcccc
Confidence             111110    0000   0112333344434444555555443212 233334455554444220  123323222211 


Q ss_pred             --CeEEEEec--CCcchHHHHHHHHHHHHHHHHcCeeEeccc-cCcc-------ccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447        374 --PLKYLYLQ--KSDDEVASKKLLQTICDMCIQAGFAITCPS-HLDQ-------EAKKQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       374 --~~~~i~~~--~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~-------~~~~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                        .+..+-+.  .+..      ...+..+..+..|..+.... .|..       .......++||++...+|++|+++++
T Consensus       336 ~~~~~~~~~~~~~g~~------~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~  409 (428)
T KOG1549|consen  336 YPGLVSLSFPYVEGES------LLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLV  409 (428)
T ss_pred             cccceeeecccccCcc------hhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHH
Confidence              11222222  1110      11122222222333332221 0100       01123578999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy15447        442 ETLCKSHDIAV  452 (457)
Q Consensus       442 ~~l~~~~~~~~  452 (457)
                      +.+.+..+...
T Consensus       410 ~~i~~~v~~~~  420 (428)
T KOG1549|consen  410 DAIKKLVSLLR  420 (428)
T ss_pred             HHHHHHHHhcc
Confidence            99998877654

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.82  E-value=7.6e-18  Score=162.58  Aligned_cols=319  Identities=15%  Similarity=0.122  Sum_probs=189.0

Q ss_pred             ChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHH---H-HHHHHhhcCCC----cE-EEecccHHHHHHHHHhhcCCCC
Q psy15447         96 NPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLD---L-ENDIASFMGLE----ET-ALYSFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~---l-~~~la~~~g~~----~~-i~~~sG~~a~~~ai~a~~~~gd  165 (457)
                      +|.+.++....+. +|..++.+.|.+.| .+...+   | .+++.++|+.+    .+ +-..||+.|+..++.+++++||
T Consensus        33 Sp~v~~al~S~l~nkyaeg~pg~ryy~G-~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD  111 (399)
T PF00464_consen   33 SPAVREALGSDLTNKYAEGYPGKRYYGG-CEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGD  111 (399)
T ss_dssp             -HHHHHHHTSGGGGS-TTEETTEESSSS-THHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-
T ss_pred             CHHHHHHhCCcceeeccccCCCcccccC-cchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcC
Confidence            4777776655553 45445555555444 344444   3 34455588887    55 4557999999999999999999


Q ss_pred             EEEEeCcccHHHHH-HH---------HhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        166 AVFVDENINFAIQT-GL---------IASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       166 ~v~~~~~~h~~~~~-~~---------~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      .|+.-...|+.... +.         .....+...++.+      |.+++++.+++..          +++|++..... 
T Consensus       112 ~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k----------PklIi~G~S~y-  180 (399)
T PF00464_consen  112 TIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHK----------PKLIICGASSY-  180 (399)
T ss_dssp             EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH------------SEEEEE-SST-
T ss_pred             cEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcC----------CCEEEECchhc-
Confidence            99887666554331 11         1111234444322      8999999998754          35777754332 


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec--------
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS--------  300 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~--------  300 (457)
                       -...|+++++++|++.|++|++|-+|-.|..-. |. +..-  +  ..+|++++|.+|+| |+.||++.++        
T Consensus       181 -~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~-g~-~~~P--~--~~ADvvt~sThKtl~GPrggiI~~~~~~~~~~~  253 (399)
T PF00464_consen  181 -PRPIDFKRFREIADEVGAYLMADISHIAGLIAG-GL-FPNP--F--PYADVVTGSTHKTLRGPRGGIILTNKGSKNVDK  253 (399)
T ss_dssp             -SS---HHHHHHHHHHTT-EEEEE-TTTHHHHHT-TS-S--G--C--CTSSEEEEESSGGG-SSS-EEEEES-SEEEE-T
T ss_pred             -cCccCHHHHHHHHHhcCcEEEecccccccceeh-he-ecCc--c--ccceEEEeeccccccccCceEEEEcCCccccCC
Confidence             234678999999999999999999997775521 11 1111  2  23699999999999 7889999988        


Q ss_pred             ------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-C
Q psy15447        301 ------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-R  371 (457)
Q Consensus       301 ------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~  371 (457)
                            +++.+.+...-.+...++ .+....|+...++... .. ..+..+++.+|++.|.+.|.+    .|+++... .
T Consensus       254 ~~~~~~~~l~~~I~~avfP~~qg~-~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~----~G~~v~~ggT  328 (399)
T PF00464_consen  254 KGKEIDEELAEKIDSAVFPGLQGG-PHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE----RGFKVVTGGT  328 (399)
T ss_dssp             TS-EEEHHHHHHHHHHHTTTT-SS---HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TT-EEGGGS-
T ss_pred             cccccHHHHHHHhccccCCCcccC-cchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh----CCcEEEECCC
Confidence                  788888876544433333 2333333333334333 21 246788999999999999999    89988643 5


Q ss_pred             CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec----CCCCHHHHHHHHHHH
Q psy15447        372 DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN----ISHTEQDMNSLIETL  444 (457)
Q Consensus       372 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~----~~~t~edi~~~~~~l  444 (457)
                      +++++++.+....      .......+.|.+.||.+.....|....+.....+||..+    ....++|++++.+.|
T Consensus       329 d~H~vlvd~~~~~------~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I  399 (399)
T PF00464_consen  329 DNHQVLVDLRSFG------IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI  399 (399)
T ss_dssp             SSSEEEEEGGGGT------S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred             CCCeEEEEecccc------cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence            6788888876421      034566777888899997655543322333578999875    345778888876643

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.82  E-value=5.3e-18  Score=165.75  Aligned_cols=307  Identities=11%  Similarity=0.047  Sum_probs=199.2

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCccc-----ChHHHHHHHHHHHhhcCCC---cEEEecc-cHHHHHHHHHhhcC---C
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYG-----TNVVHLDLENDIASFMGLE---ETALYSF-GFSTSASAIAAYVK---R  163 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~~---~~i~~~s-G~~a~~~ai~a~~~---~  163 (457)
                      ++.|.+|+.+.+..++ .........+     ..+...+.++.++++++.+   .++|+++ |++++..++..+..   +
T Consensus        11 p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~   89 (355)
T cd00611          11 PEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT   89 (355)
T ss_pred             CHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence            5789999999887765 2221111111     1267788999999999952   4666655 89999999988876   5


Q ss_pred             CCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        164 NDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       164 gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      ++.|+.-...|.+ ..-.+..|.++..++.+      +..++++..  ..        +++++|.+.+..+.+|.+.+  
T Consensus        90 ~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~--~~--------~~~~lV~~~h~~t~tG~~~~--  156 (355)
T cd00611          90 ADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWD--LA--------PDAAYVHYCSNETIHGVEFD--  156 (355)
T ss_pred             EEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcC--CC--------CCCCEEEEeCCcccccEEcc--
Confidence            5666553333333 23335557776666542      212222111  11        35678889898888999733  


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcc--
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGY--  314 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~--  314 (457)
                         ++++.||+++++|.++++|..           .++.+..|+.+.|.+|++|+.| |+++.++++.+.+......+  
T Consensus       157 ---~i~~~~g~~~~VDa~qs~g~~-----------~idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~~  222 (355)
T cd00611         157 ---EVPDTGGVPLVADMSSNILSR-----------PIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLN  222 (355)
T ss_pred             ---eecccCCCeEEEEccccccCC-----------CCCHHHhCEEEeecccccCCCceEEEEECHHHHhhcccCCCCccc
Confidence               566679999999999998754           2323334566667899999876 88899988877653311100  


Q ss_pred             --------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeE-Eecc--CCC-CeEEEE
Q psy15447        315 --------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFL-VQGH--RDT-PLKYLY  379 (457)
Q Consensus       315 --------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~-~~~~--~~~-~~~~i~  379 (457)
                              ...+++|....++..++++++.+.   +.+.++.+++.+++++.|++   ++|+. ...+  ..+ .++.+.
T Consensus       223 ~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~---~~gl~~~~~~~~~rs~~vvsf~  299 (355)
T cd00611         223 YKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDN---SNGFYRGPVDKRARSRMNVPFR  299 (355)
T ss_pred             HHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CccccccCCCHHHcCceEEEEE
Confidence                    001234555566667889988653   45678888999999999998   44642 1111  123 346666


Q ss_pred             ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +++..       ...++.+.+.++|+.+.+..       ...+.+|+++...+|++|||+++++|+++
T Consensus       300 ~~~~~-------l~~~~~~~~~r~G~~~~~~~-------~~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         300 LGKEE-------LEKEFLKEAEAAGMIGLKGH-------RSVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             cCChh-------hhHHHHHHHHHCCCcccCCC-------cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            55421       22455567778999743332       12368999999999999999999999985

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.82  E-value=2e-17  Score=163.00  Aligned_cols=305  Identities=13%  Similarity=0.133  Sum_probs=196.8

Q ss_pred             hHHHHHHHHHHHhhcCCC---cEEEecccH-HHHHHHHHhhcC---CCCEEEEeCcccHHHHHHHHhcCCeEEEecC---
Q psy15447        124 NVVHLDLENDIASFMGLE---ETALYSFGF-STSASAIAAYVK---RNDAVFVDENINFAIQTGLIASRCKVQYFKH---  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~~i~~~sG~-~a~~~ai~a~~~---~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---  193 (457)
                      ..+..++++.+++++|.+   .++++++|+ .++..++.++..   ++|.|+++...|.+..+++...|.+++.++.   
T Consensus       104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d  183 (444)
T TIGR03531       104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD  183 (444)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence            566788999999999987   688899999 688878777653   5899999999999999999999998887762   


Q ss_pred             -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447        194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV  268 (457)
Q Consensus       194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~  268 (457)
                           .|++++++.|.+..       +..+.+|+..+.+...|...|+++|.++|++||+++|+|++|+.+..-  ....
T Consensus       184 ~~~~~iD~e~Le~aIt~~~-------~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~--~~~~  254 (444)
T TIGR03531       184 GDELTTDVEDIERAIEEIG-------PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK--YMEL  254 (444)
T ss_pred             CcCCCcCHHHHHHHHHhcc-------CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh--hhhh
Confidence                 27999999997532       134455666655555678899999999999999999999999853211  0000


Q ss_pred             ccccCCCCCCccEEEecCcccccCc--ccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHH
Q psy15447        269 TEYFGVSTEEVDMIIGSLEHALGSV--GGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTK  344 (457)
Q Consensus       269 ~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~  344 (457)
                      . ..+.....+|+++.|++|.+..+  ||+++. ++++++.++.....   .....+ ...+....+.+- +...+++++
T Consensus       255 ~-~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g---~~~~s~-~~~~~~~ll~~G~~g~~~li~~  329 (444)
T TIGR03531       255 I-NKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG---RASASP-SLDVLITLLSLGSKGYLELLKE  329 (444)
T ss_pred             h-hccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC---CCCChH-HHHHHHHHHHhCHHHHHHHHHH
Confidence            0 01221113589999999999753  455545 67777777643211   111122 222222222211 222457777


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEeccCCCCeE-EEEecCCcchHHHHHHHHHHHHHHHHcCeeE----eccc--------
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK-YLYLQKSDDEVASKKLLQTICDMCIQAGFAI----TCPS--------  411 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v----~~~~--------  411 (457)
                      ..++.+++.+.|+++....|..+...+..++- .+.+..-.     ..+...+...|..++|--    .+..        
T Consensus       330 ~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~  404 (444)
T TIGR03531       330 RKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCE  404 (444)
T ss_pred             HHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----ccCHHHHHHHHHhCCCCCceeecCCCceEECCEE
Confidence            88888899888887543455555533344432 22232110     013556777887776532    1111        


Q ss_pred             ---cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        412 ---HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       412 ---~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                         |.+.....+.+++-+.....+|++|||.+++.|+++
T Consensus       405 ~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       405 FKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             eecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence               000000112346777777889999999999999875

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK04311 selenocysteine synthase; Provisional

Probab=99.81  E-value=2.7e-17  Score=163.86  Aligned_cols=318  Identities=12%  Similarity=0.097  Sum_probs=202.4

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCc-ccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCccc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGF-YGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENIN  174 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~-~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h  174 (457)
                      ++++.+++.+.+..|....  +... ....+.+..+++.+++++|.+.+++++||+.|+..++.+ ..+||.|++.+..|
T Consensus        99 ~~~v~eav~~~~~~~~~le--~~l~~g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e~  175 (464)
T PRK04311         99 SEAAIEAVTEAARGYSNLE--YDLATGKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGEL  175 (464)
T ss_pred             CHHHHHHHHHHHhcccccc--cchhhcccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchhh
Confidence            5788999988887654211  0110 012355678999999999999999999999999988865 47899999887654


Q ss_pred             HH------HHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC--CC--CCCChHHHHH
Q psy15447        175 FA------IQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN--SA--DICPLKDILS  241 (457)
Q Consensus       175 ~~------~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~--~G--~i~~l~~i~~  241 (457)
                      ..      ....+...|+++..++.+   +++++++++.           +++++|+++++.|+  +|  ...|+++|.+
T Consensus       176 ~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~-----------~~TklV~~vh~sN~~i~G~~~~~dl~eI~~  244 (464)
T PRK04311        176 VEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAIN-----------ENTALLLKVHTSNYRIEGFTKEVSLAELAA  244 (464)
T ss_pred             hhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcC-----------ccCeEEEEEcCCCccccccCCcCCHHHHHH
Confidence            42      233466789998888763   5777777774           34678888888875  34  5789999999


Q ss_pred             HHHHcCcEEEEEcCcccccccCCCC-ccccc---cCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCccee
Q psy15447        242 LRSKYQARIFVDESVSFGTLGSTGH-GVTEY---FGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCF  316 (457)
Q Consensus       242 l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~---~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~  316 (457)
                      +|++||+++|+|.+.  |.++..+. ++...   ......++|+++.|.+|++| +.+|++++++++++.++.....-..
T Consensus       245 lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~~r~l  322 (464)
T PRK04311        245 LGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPLKRAL  322 (464)
T ss_pred             HHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchhHHHH
Confidence            999999999999953  33432211 00000   11011467999999999996 4579999999998877632211111


Q ss_pred             cCCCcHHHHHHHHHHHHHHh-h------------CcHHHHHHHHHHHHHHHHhhcccccCC--eEEecc----C------
Q psy15447        317 SASLPPFLAVAANKALHLLK-A------------NPSLLTKLREKCNTMHSLLSQHKVTQR--FLVQGH----R------  371 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~-~------------~~~~~~~l~~~~~~l~~~L~~~~~~~~--~~~~~~----~------  371 (457)
                        ...-...++..+++.... .            .....++++++++.+.+.|+.... .+  +++...    +      
T Consensus       323 --r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~~~~~~~~~~~~gggs~p~  399 (464)
T PRK04311        323 --RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALG-AAFAVEVVPSFSQVGGGSLPV  399 (464)
T ss_pred             --hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccC-CCeeEEEEEccCccCCCCCcC
Confidence              112222233333333111 0            112346777888888888876210 12  233321    0      


Q ss_pred             -CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc--CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        372 -DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA--GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       372 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                       .-|-+.+.+....      ....++.+.|++-  .|+.+..          .+.+.+-+ -+..++|++.+++++++++
T Consensus       400 ~~~~~~~v~~~~~~------~~~~~l~~~lr~~~~~i~~r~~----------~~~~~ld~-r~~~~~~~~~~~~~~~~~~  462 (464)
T PRK04311        400 DRLPSAAVTLTPKD------RSLEALAARLRLLPPPVIGRIE----------DGRLLLDL-RTLEEEDEERLAAALLEAL  462 (464)
T ss_pred             CCCCeEEEEEeCCC------CCHHHHHHHHhcCCCCEEEEEE----------CCEEEEEe-CcCCHHHHHHHHHHHHHHh
Confidence             0134444444321      1456788888864  4655421          36677766 4478999999999998875


Q ss_pred             H
Q psy15447        449 D  449 (457)
Q Consensus       449 ~  449 (457)
                      .
T Consensus       463 ~  463 (464)
T PRK04311        463 N  463 (464)
T ss_pred             h
Confidence            3

>KOG0256|consensus

Probab=99.81  E-value=2.3e-17  Score=153.30  Aligned_cols=299  Identities=13%  Similarity=0.114  Sum_probs=205.0

Q ss_pred             CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecCC-------CHHHHHHHHHhhchhcc
Q psy15447        140 LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKHN-------NMQHLEELLRQQDERDT  211 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~~-------d~~~le~~l~~~~~~~~  211 (457)
                      .++.+++++++.|++.....++.|||..+++.|+|++...-++. .|.+++++...       +.+++|.++.+....  
T Consensus       146 P~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~--  223 (471)
T KOG0256|consen  146 PERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKL--  223 (471)
T ss_pred             ccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHh--
Confidence            45778888899999999999999999999999999887655443 36677665432       578899888776532  


Q ss_pred             cCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-cccccc---CCCCCCccEEEe
Q psy15447        212 LNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYF---GVSTEEVDMIIG  284 (457)
Q Consensus       212 ~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~---~~~~~~~Di~~~  284 (457)
                         ..+++-+++.+++||-|++.+   |..+.+.+.++++-+|+||+|+..+++..+. ...+..   ...++.+ -++.
T Consensus       224 ---~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rv-Hivy  299 (471)
T KOG0256|consen  224 ---GLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRV-HIVY  299 (471)
T ss_pred             ---CCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcE-EEEE
Confidence               356777888889999999987   6677788889999999999999888876532 122221   1245555 3467


Q ss_pred             cCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcc
Q psy15447        285 SLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       285 s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      |+||-||.+|   |.+.. +++++...+... .+..-.+.....++..+---+..++ .++..+|++++.+++.++|++ 
T Consensus       300 slSKD~GlpGfRvGviYS~ne~VvsaA~kms-sf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~-  377 (471)
T KOG0256|consen  300 SLSKDFGLPGFRVGVIYSNNEDVVSAATKMS-SFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKA-  377 (471)
T ss_pred             EeccccCCCceEEEEEEecChHHHHHHHHHh-hccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHh-
Confidence            9999999888   77765 566666665432 1211111122222222222122221 145678899999999999999 


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                         .|+++.....|.++|+.+..-..... ...-.++.+++.++ ++.++|+..+..   ..++++|+++.. +.++.++
T Consensus       378 ---lgI~cl~s~AGlF~wvDlr~lL~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~C---~EpGWFRvcFAn-~~~~t~~  449 (471)
T KOG0256|consen  378 ---LGIPCLKSNAGLFCWVDLRKLLTSLT-FEGELELWERILDNVKLNLSPGSSCHC---HEPGWFRVCFAN-MSEETLE  449 (471)
T ss_pred             ---cCCceeecCCeeEEEEEhHHhcCcCC-hHHHHHHHHHHHHhhccccCCCCccee---cCCCeEEEEecc-CCHHHHH
Confidence               88998877778888887654221100 01223577777777 999998876543   346899999854 5666666


Q ss_pred             HHHHHHHHHHHHhcCC
Q psy15447        439 SLIETLCKSHDIAVQP  454 (457)
Q Consensus       439 ~~~~~l~~~~~~~~~~  454 (457)
                      -+++.|+..+..-.++
T Consensus       450 ~am~Ri~~~~~~~~~~  465 (471)
T KOG0256|consen  450 VAMRRLKQFLDSQVQP  465 (471)
T ss_pred             HHHHHHHHHHHhhhcc
Confidence            6899998887754444

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.81  E-value=2.6e-17  Score=159.78  Aligned_cols=308  Identities=8%  Similarity=0.038  Sum_probs=203.7

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCC-cccCh---HHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCCCCEEE
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRG-FYGTN---VVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKRNDAVF  168 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~-~~g~~---~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~gd~v~  168 (457)
                      ..+.+++.+.+..+.....+... ..-..   +...++++.|.++++.+   .+++++ ||+.|+++++..+.+++|.++
T Consensus         5 ~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l   84 (349)
T TIGR01364         5 EEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVAD   84 (349)
T ss_pred             HHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEE
Confidence            47888998888866521111111 11123   67788899999999852   466664 599999999999988887544


Q ss_pred             E-eCcccHH-HHHHHHhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHH
Q psy15447        169 V-DENINFA-IQTGLIASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDIL  240 (457)
Q Consensus       169 ~-~~~~h~~-~~~~~~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~  240 (457)
                      + ..+.++. ...-++..|. +..+.      ..++.++++....          ++.++|.+.+.-+.+|...|     
T Consensus        85 ~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~th~ETstGv~~~-----  148 (349)
T TIGR01364        85 YIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS----------EDAAYVHYCANETIHGVEFR-----  148 (349)
T ss_pred             EEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC----------CCCCEEEEcCCCCcccEecc-----
Confidence            3 3443333 2333445565 43322      3333333322211          24568888888888999876     


Q ss_pred             HHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCC-------
Q psy15447        241 SLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGS-------  312 (457)
Q Consensus       241 ~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~-------  312 (457)
                      ++++.+++++++|.++++|..           .++.++.|+++.|.+|++|++| |+++.++++++.+.....       
T Consensus       149 ~l~~~~~~l~iVDavss~g~~-----------~id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~~~~  217 (349)
T TIGR01364       149 ELPDVKNAPLVADMSSNILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLNYKI  217 (349)
T ss_pred             eecccCCCeEEEEccccccCc-----------cCCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcchHHH
Confidence            777889999999999987643           2333455799999999999876 889999988876532111       


Q ss_pred             ----cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCC-CeEEEEec
Q psy15447        313 ----GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDT-PLKYLYLQ  381 (457)
Q Consensus       313 ----~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~-~~~~i~~~  381 (457)
                          ...+ +++|-....+..++|+++.+.   +.+.++.+++.+++++.|++   ++|+.....   ..+ .++.+.++
T Consensus       218 ~~~~~~~~-~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~---~~gl~~~~~~~~~rs~~v~sf~~~  293 (349)
T TIGR01364       218 HAENDSMY-NTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDN---SNGFYRNPVDPRNRSRMNVVFTLG  293 (349)
T ss_pred             HHhcCCCC-CCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---CCCeeccCCCHHHcCCeEEEEecC
Confidence                1111 234555556666889887653   46778888999999999999   445533311   123 44666655


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +..       ...++.+.+.++|+++.+...       ..+.+|+++...+|++|||+++++|+++.+
T Consensus       294 ~~~-------~~~~~~~~~~~~Gi~~~~~~~-------~~g~vRvS~~~~nt~edid~l~~al~~~~~  347 (349)
T TIGR01364       294 NEE-------LEKRFLKEAEERGLVSLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFQK  347 (349)
T ss_pred             Chh-------HhHHHHHHHHHCCCcccCCcc-------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence            431       234676788889995554432       136899999999999999999999998764

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PLN02880 tyrosine decarboxylase

Probab=99.81  E-value=4.1e-17  Score=164.64  Aligned_cols=310  Identities=15%  Similarity=0.111  Sum_probs=198.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCc---------EEEecccHHHHHHHHHhhcC-----------CCCEEEEeCcccHHHHHHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEE---------TALYSFGFSTSASAIAAYVK-----------RNDAVFVDENINFAIQTGLI  182 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~v~~~~~~h~~~~~~~~  182 (457)
                      ..+...++-+.+++++|.+.         .+++++|++||..++.+...           +.-.|++++..|.++.+++.
T Consensus       120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~  199 (490)
T PLN02880        120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ  199 (490)
T ss_pred             cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence            45666677777888888653         47788899999988865432           12256678889999999999


Q ss_pred             hcCCe---EEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447        183 ASRCK---VQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV  252 (457)
Q Consensus       183 ~~g~~---~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~  252 (457)
                      +.|..   ++.++.       .|+++|++.|++....     ...+.+|+..-...++|.+.|+++|.++|++||+|+++
T Consensus       200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~-----g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHV  274 (490)
T PLN02880        200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS-----GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHV  274 (490)
T ss_pred             HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC-----CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEE
Confidence            99863   344332       3789999999765421     13345666666667899999999999999999999999


Q ss_pred             EcCcccccccC-CCCccccccCCCCCCccEEEecCcccccCc--ccEEEecH--HHHHHHHhhCCcceec------CCCc
Q psy15447        253 DESVSFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSS--YIIEHHRLSGSGYCFS------ASLP  321 (457)
Q Consensus       253 DEa~~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~--~~~~~~~~~~~~~~~~------~~~~  321 (457)
                      |.+|+.+.+-. ..+.  ...|+  ..+|.++.++||+++.+  .|++..++  .+.+.+.. ...|...      ...+
T Consensus       275 DaA~gg~~~~~~~~~~--~l~gi--e~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~-~~~Yl~~~~~~~~~~~~  349 (490)
T PLN02880        275 DAAYAGSACICPEYRH--YIDGV--EEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLST-NPEFLKNKASQANSVVD  349 (490)
T ss_pred             ehhhHHHHHhCHHHHH--HhcCc--hhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHcc-CHHHhcCccccccCCCC
Confidence            99998764321 0000  11333  35699999999999643  36655543  22222211 1111100      0000


Q ss_pred             H----------HHHHHHHHHHHHHhhCcHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-H
Q psy15447        322 P----------FLAVAANKALHLLKANPSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-V  387 (457)
Q Consensus       322 ~----------~~~aaa~a~l~~~~~~~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~  387 (457)
                      +          ..+...-.+++.+.. +...++++   ++++++.+.|++   .+++++..++...++.+.+...... +
T Consensus       350 ~~~~~i~~~rr~~alklw~~l~~~G~-~g~~~~i~~~~~lA~~~~~~l~~---~~~~el~~~~~~~iv~Fr~~~~~~~~~  425 (490)
T PLN02880        350 YKDWQIPLGRRFRSLKLWMVLRLYGV-ENLQSYIRNHIKLAKEFEQLVAQ---DSRFEVVTPRIFSLVCFRLVPPKNNED  425 (490)
T ss_pred             hhccCcCCCCcccHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEecCCceEEEEEEEeCCCCChh
Confidence            0          001111122443322 23444454   899999999987   5789988777788888887642111 1


Q ss_pred             HHHHHHHHHHHHHHHcC-eeEeccccCccccCCCCCeEEEEecCCCC-HHHHHHHHHHHHHHHHHhc
Q psy15447        388 ASKKLLQTICDMCIQAG-FAITCPSHLDQEAKKQKPSIRITCNISHT-EQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~G-i~v~~~~~~~~~~~~~~~~lRi~~~~~~t-~edi~~~~~~l~~~~~~~~  452 (457)
                      .......++.++|.+.| +++....      ..+..++|+++....| ++|++.+++.|.++.+++.
T Consensus       426 ~~~~~n~~l~~~l~~~g~~~v~~t~------~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~  486 (490)
T PLN02880        426 NGNKLNHDLLDAVNSSGKIFISHTV------LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL  486 (490)
T ss_pred             hHHHHHHHHHHHHHhCCCEEEEEEE------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            11224456778888775 4444433      2345689999866655 5999999999999887764

>PLN02590 probable tyrosine decarboxylase

Probab=99.81  E-value=1.3e-16  Score=161.15  Aligned_cols=310  Identities=13%  Similarity=0.106  Sum_probs=203.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCc---------EEEecccHHHHHHHHHhhcC-----------CCCEEEEeCcccHHHHHHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEE---------TALYSFGFSTSASAIAAYVK-----------RNDAVFVDENINFAIQTGLI  182 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~ai~a~~~-----------~gd~v~~~~~~h~~~~~~~~  182 (457)
                      ..+...++-+.|++++|.+.         .+++++|++||..++.+...           +.-+|.+++..|.++.++++
T Consensus       168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~  247 (539)
T PLN02590        168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL  247 (539)
T ss_pred             hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence            35566666777777787553         47788999999988866432           12255668889999999999


Q ss_pred             hcCC---eEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447        183 ASRC---KVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV  252 (457)
Q Consensus       183 ~~g~---~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~  252 (457)
                      +.|.   .++.++.       .|+++|++.|++....     ...+.+|+..-...++|.+.|+++|.++|++||+||++
T Consensus       248 ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~-----g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHV  322 (539)
T PLN02590        248 IGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAK-----GFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHV  322 (539)
T ss_pred             HcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhc-----CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEE
Confidence            9886   3444432       3799999999764321     13345666666666799999999999999999999999


Q ss_pred             EcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecH--HHHHHHH-------hhC---------
Q psy15447        253 DESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSS--YIIEHHR-------LSG---------  311 (457)
Q Consensus       253 DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~--~~~~~~~-------~~~---------  311 (457)
                      |.|++...+ .+..+.+  ..|+  +.+|.+....||++..  ..|+++.++  .+.+.+.       ...         
T Consensus       323 DaA~GG~al~~~~~r~~--~~Gi--e~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~  398 (539)
T PLN02590        323 DAAYAGNACICPEYRKF--IDGI--ENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNY  398 (539)
T ss_pred             ecchhhhhhcChhhHHH--hcCC--ccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCc
Confidence            999975542 2111111  2354  4679999999999964  335555543  2222221       100         


Q ss_pred             CcceecCC--CcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-
Q psy15447        312 SGYCFSAS--LPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-  386 (457)
Q Consensus       312 ~~~~~~~~--~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-  386 (457)
                      ..+....+  ...+...   .+|+.+..  ..+..++..+++++|.+.|++   .+++++..++..+++.+.+...... 
T Consensus       399 ~d~~i~lsRr~raLklW---~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~---~~~fel~~~~~l~iVcFr~~~~~~~~  472 (539)
T PLN02590        399 KDWQISLSRRFRSLKLW---MVLRLYGSENLRNFIRDHVNLAKHFEDYVAQ---DPSFEVVTTRYFSLVCFRLAPVDGDE  472 (539)
T ss_pred             cccCCCCCCchHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceEEEEEEecCCCCCH
Confidence            00011111  1222223   33443322  235677777899999999988   5789998777788888887643211 


Q ss_pred             HHHHHHHHHHHHHHHHcCee-EeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        387 VASKKLLQTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +.......++.+++.+.|.. +.+..      ..+..++|+++ +..+|++||+.+++.|.+...++..
T Consensus       473 ~~~~~ln~~l~~~l~~~G~~~vs~t~------~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~  535 (539)
T PLN02590        473 DQCNERNRELLAAVNSTGKIFISHTA------LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTR  535 (539)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeE------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            11223566788888888754 44332      23356899998 5556789999999999998777654

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.81  E-value=5.7e-18  Score=164.13  Aligned_cols=289  Identities=17%  Similarity=0.143  Sum_probs=178.3

Q ss_pred             cChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------
Q psy15447        122 GTNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------  194 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------  194 (457)
                      -......+.++.+|+.+|.++++|.++|+ .+|.+++.+++++||.|++++.+|-++..++.++|+.+++++..      
T Consensus        63 ~p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi  142 (417)
T PF01276_consen   63 DPEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI  142 (417)
T ss_dssp             TTBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred             CCccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence            35667889999999999999999998888 68999999999999999999999999999999999988765432      


Q ss_pred             ----CH-----HHHHHHHHhhchhcccCCCCccE---EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc
Q psy15447        195 ----NM-----QHLEELLRQQDERDTLNSKVTKK---FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG  262 (457)
Q Consensus       195 ----d~-----~~le~~l~~~~~~~~~~~~~~~~---~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g  262 (457)
                          ++     +.+++.|++..        ..++   ++++.|-+  .|.+.++++|.++|+++++.|++||||+.- ++
T Consensus       143 ~~~i~~~~~~~~~i~~~l~~~p--------~~k~~~~vvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGah-~~  211 (417)
T PF01276_consen  143 IGGISPDEFNEEDIEEALKEHP--------DAKAPRLVVLTSPTY--YGVCYDIKEIAEICHKHGIPLLVDEAHGAH-FG  211 (417)
T ss_dssp             BEEB-GGGGSHHHHHHHHHHCT--------TCHCESEEEEESS-T--TSEEE-HHHHHHHHCCTECEEEEE-TT-TT-GG
T ss_pred             ccCCChhhhhHHHHHHHHHhCc--------cccCceEEEEeCCCC--CeEEECHHHHHHHhcccCCEEEEEcccccc-cc
Confidence                34     88999998754        2233   55555544  599999999999999999999999998632 11


Q ss_pred             CCCCccccccCCCCCCcc-------EEEecCcccccC--cccEEEecHHH---HHHHHhhCCcceecCCCcHHHHHHHHH
Q psy15447        263 STGHGVTEYFGVSTEEVD-------MIIGSLEHALGS--VGGFCVGSSYI---IEHHRLSGSGYCFSASLPPFLAVAANK  330 (457)
Q Consensus       263 ~~g~~~~~~~~~~~~~~D-------i~~~s~sK~lg~--~gG~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~aaa~a  330 (457)
                      -.  .+..  +....+.|       +++.|.||.+++  .++++-.+..-   .+.++.. .....|+|++.+.+|..-.
T Consensus       212 F~--~lp~--~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-l~~~~TTSPSY~lmASlD~  286 (417)
T PF01276_consen  212 FH--PLPR--SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-LSMHQTTSPSYPLMASLDV  286 (417)
T ss_dssp             CS--GGGT--TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-HHHHS-SS--HHHHHHHHH
T ss_pred             CC--CCcc--chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-HHHHcCCChHHHHHHHHHH
Confidence            11  1110  01113445       999999999974  34555443321   2333221 1122345556666566656


Q ss_pred             HHHHH-h-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----C------------------------Ce-EEEE
Q psy15447        331 ALHLL-K-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----T------------------------PL-KYLY  379 (457)
Q Consensus       331 ~l~~~-~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----~------------------------~~-~~i~  379 (457)
                      +.+++ . +..++.++..+++..+++.|+++..+.++.+..+..    .                        |+ +.+.
T Consensus       287 a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~  366 (417)
T PF01276_consen  287 ARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTIN  366 (417)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEE
Confidence            67777 2 235678888889999999994333255555543210    0                        11 1222


Q ss_pred             ecCC-cc--hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        380 LQKS-DD--EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       380 ~~~~-~~--~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      ++.- ..  .......+..+.+.|+++||.+....         .+.+-+.++...|++
T Consensus       367 ~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---------~~~vL~l~t~G~t~~  416 (417)
T PF01276_consen  367 TPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---------LYNVLFLFTIGDTKE  416 (417)
T ss_dssp             -STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---------SSEEEEE--TTS-HH
T ss_pred             ccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---------CccEEEEecCCCCCC
Confidence            2100 00  01122356678899999999886543         245666666666654

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.81  E-value=7.8e-18  Score=164.56  Aligned_cols=287  Identities=11%  Similarity=0.047  Sum_probs=186.8

Q ss_pred             hHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhc---CCeEEEecCCCH
Q psy15447        124 NVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIAS---RCKVQYFKHNNM  196 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~---g~~~~~~~~~d~  196 (457)
                      .+...+.++.++++++.+   .++|+ +||+.++..++..+..+ +.+.+..+.|+..+......   ..++..++...-
T Consensus        40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~  118 (361)
T TIGR01366        40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG  118 (361)
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC
Confidence            577788999999999963   35565 56899999999887643 33344445555433322211   123444432211


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +.++..+           .+++++|.+.+..+.+|.+.|+++|   ++++|+++++|.++++|..           .++.
T Consensus       119 ~~~~~~~-----------~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~-----------~idv  173 (361)
T TIGR01366       119 SAPEPQA-----------DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGL-----------PVDI  173 (361)
T ss_pred             CCCCCcc-----------CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCC-----------CCCH
Confidence            2222111           1467899999999999999999887   5899999999999997643           2223


Q ss_pred             CCccEEEecCcccccCcccE--EEecHHHHHHHHhhCCc------ce------------ecCC-CcHHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSVGGF--CVGSSYIIEHHRLSGSG------YC------------FSAS-LPPFLAVAANKALHLL  335 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~gG~--v~~~~~~~~~~~~~~~~------~~------------~~~~-~~~~~~aaa~a~l~~~  335 (457)
                      +++|+++.|.+|++|+++|.  ++.++++++.+.....+      +.            .+.+ ++.....+..++++++
T Consensus       174 ~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l  253 (361)
T TIGR01366       174 AETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWM  253 (361)
T ss_pred             HHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHH
Confidence            34799999999999877653  45578777665421100      10            1112 2333344566788888


Q ss_pred             hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-C--CCCeE-EEEecCCcchHHHHHHHHHHHHHHHHcCeeEe
Q psy15447        336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-R--DTPLK-YLYLQKSDDEVASKKLLQTICDMCIQAGFAIT  408 (457)
Q Consensus       336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~--~~~~~-~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~  408 (457)
                      .+.   +...++.+++.+++++.|++.   .++..... .  .++.+ .+.+.++.       ...++.+.|.++||.+.
T Consensus       254 ~~~gg~e~~~~r~~~l~~~l~~~l~~~---~~~~~~~~~~~~~s~~v~~v~~~~g~-------~~~~v~~~L~~~gI~i~  323 (361)
T TIGR01366       254 NGNGGLDWAVARTADSSSRLYSWAQER---PYATPFVTDPGKRSQVVGTIDFVDDI-------DAATVAKILRANGIVDT  323 (361)
T ss_pred             HHccCHHHHHHHHHHHHHHHHHHHHhC---CCcccCCCChhhcccceEEEECCCcc-------CHHHHHHHHHHCCCeec
Confidence            654   345688889999999999882   33333211 1  13332 23333333       45678899999999886


Q ss_pred             ccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        409 CPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       409 ~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +...     ....+.+|++....+|++|+++++++|+++++++
T Consensus       324 ~~~~-----~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~  361 (361)
T TIGR01366       324 EPYR-----KLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL  361 (361)
T ss_pred             cCcc-----ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence            5422     1224689999999999999999999999987653

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>KOG0053|consensus

Probab=99.80  E-value=4e-17  Score=154.79  Aligned_cols=210  Identities=16%  Similarity=0.190  Sum_probs=158.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l  199 (457)
                      ++....|++.++++.|.+.++.++||..|+..++..++..|+.|+.....|+.+..-+    ...|.....++..|++.+
T Consensus        76 nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~  155 (409)
T KOG0053|consen   76 NPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKI  155 (409)
T ss_pred             CCchHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHH
Confidence            5667889999999999999999999999999999999999998888777776655433    345667777766666666


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++.+|++|++.||...+.++++|+++|+++|+++++|+..+.+..       .  ..+ +-++
T Consensus       156 ~~~i~-----------~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-------~--~pL-~lGA  214 (409)
T KOG0053|consen  156 LKAIK-----------ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-------Q--DPL-PLGA  214 (409)
T ss_pred             HHhhc-----------cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-------c--Chh-hcCC
Confidence            66664           3578999999999999999999999999999999999998654321       1  111 2456


Q ss_pred             cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      ||++.|.+|.+|+    .||.++.+ +++...++...  -..++.++|..|...+..++.+.   -++++..+++-.+.+
T Consensus       215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~--~~lg~~~~p~~~~ll~Rglktl~---lRi~~~~ena~~~A~  289 (409)
T KOG0053|consen  215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ--EDLGWCEDPFDLFLLSRGLKTLH---LRINKHSENALKIAL  289 (409)
T ss_pred             CEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH--HHhcCCCCHHHHHHHhcCcchhh---hhHHHHHHHHHHHHH
Confidence            9999999999974    46777775 77777765433  22344578888887766655442   245566666666666


Q ss_pred             Hhhcc
Q psy15447        355 LLSQH  359 (457)
Q Consensus       355 ~L~~~  359 (457)
                      .|.+.
T Consensus       290 ~Le~~  294 (409)
T KOG0053|consen  290 LLEAH  294 (409)
T ss_pred             HhhhC
Confidence            66663

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.79  E-value=3.8e-17  Score=174.77  Aligned_cols=304  Identities=13%  Similarity=0.100  Sum_probs=195.2

Q ss_pred             cccChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhc----CCCC----EEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447        120 FYGTNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYV----KRND----AVFVDENINFAIQTGLIASRCKVQY  190 (457)
Q Consensus       120 ~~g~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~----~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~  190 (457)
                      ..|..+...++++.+++++|.+.+-+.. +|+.++.+++.+..    ++|+    .|+++...|++....+...|.++++
T Consensus       537 ~qG~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~  616 (954)
T PRK05367        537 AAGYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVV  616 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEE
Confidence            4566788899999999999998776655 55566544443332    3444    6999999999999999999999988


Q ss_pred             ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                      ++.+     |+++|++.+++..        .+.++|++..+...++...|+++|.++|+++|+++++|.++..+..+-.-
T Consensus       617 v~~d~~G~iD~~~L~~~i~~~~--------~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~  688 (954)
T PRK05367        617 VACDENGNIDLDDLRAKAEEHA--------DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR  688 (954)
T ss_pred             ECCCCCCCcCHHHHHHHHhccC--------CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC
Confidence            7753     7889988886532        34566666665544333478999999999999999999999755443210


Q ss_pred             CccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhCC---cce--ecC-CCcHH-HHHHHHHH
Q psy15447        266 HGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSGS---GYC--FSA-SLPPF-LAVAANKA  331 (457)
Q Consensus       266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~~---~~~--~~~-~~~~~-~~aaa~a~  331 (457)
                      .   ..     .++|++++++||+||.      +| |++..++.+...+.....   ...  .+. ...+. .+..+..+
T Consensus       689 p---g~-----~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a  760 (954)
T PRK05367        689 P---GD-----IGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPIS  760 (954)
T ss_pred             h---hh-----cCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHH
Confidence            0   01     3468999999999853      12 577777655544421110   000  010 01122 11222233


Q ss_pred             HHHHhhC--cHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCC--CCeEEEEe---cCCcchHHHHHHHHHHHHHHH
Q psy15447        332 LHLLKAN--PSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRD--TPLKYLYL---QKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       332 l~~~~~~--~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~--~~~~~i~~---~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      ..++...  +.+++..+   .+++|+.+.|++   ...+.+.++..  .+-+.+.+   +....     ....++.++|.
T Consensus       761 ~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~---~~~~~~~~~~~~~~~e~i~~~~~~~~~~g-----~~~~di~krL~  832 (954)
T PRK05367        761 WMYIRMMGAEGLRQATEVAILNANYIAKRLKD---HYPVLYTGANGRVAHECILDLRPLKESTG-----ITVDDIAKRLI  832 (954)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh---hcCccccCCCCCcccceEEEeecccccCC-----CCHHHHHHHHH
Confidence            3333221  23444444   789999999977   23333322111  11122222   11100     13468999999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +.|+......+|      ..+.++|+++...|++|||+++++++.+.+++.+
T Consensus       833 d~G~~~~t~~~p------v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        833 DYGFHAPTMSFP------VAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             HCCCeEeecCCc------cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence            999987654442      3578999999999999999999999999888765

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.79  E-value=1.5e-16  Score=154.80  Aligned_cols=311  Identities=11%  Similarity=0.060  Sum_probs=196.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEec---------
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFK---------  192 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~---------  192 (457)
                      -.+...+||+.+++++|.+.++.++||+.|...+....+++||.|  ..++|..+..+ +...|....-++         
T Consensus        69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~  146 (450)
T TIGR02618        69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQL  146 (450)
T ss_pred             CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeeccccccccc
Confidence            344467999999999999999999999999776667778999977  55777666655 677776444331         


Q ss_pred             ------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCC---hHHHHHHHHHcCcEEEEEcCccccc--
Q psy15447        193 ------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICP---LKDILSLRSKYQARIFVDESVSFGT--  260 (457)
Q Consensus       193 ------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~--  260 (457)
                            ..|++.+++.|++...       ..+++|.++...|. +|...|   +++|+++|++||+.||+|.++.+|-  
T Consensus       147 ~~p~~GniD~~~Le~aI~~~~~-------~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~  219 (450)
T TIGR02618       147 NIPFKGNVDLKKLQKLIDEVGA-------DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAY  219 (450)
T ss_pred             CCCCCCCcCHHHHHHHhccccC-------cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChh
Confidence                  1279999999975321       23445555555554 577754   7899999999999999999988742  


Q ss_pred             c------cCCCCccc----cccCCCCCCccEEEecCcccccC-cccEEE-ecHHHHHHHHhhCCcc---eecCCCcHHHH
Q psy15447        261 L------GSTGHGVT----EYFGVSTEEVDMIIGSLEHALGS-VGGFCV-GSSYIIEHHRLSGSGY---CFSASLPPFLA  325 (457)
Q Consensus       261 ~------g~~g~~~~----~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~  325 (457)
                      +      |..+....    +.+    ...|.++.|..|..+. .||+++ +++++++..+.....+   ...+.+..-..
T Consensus       220 ~I~~re~g~~~~~i~ei~~e~~----~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~  295 (450)
T TIGR02618       220 FIKEREQGYEDKSIAEILKEMM----SYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDM  295 (450)
T ss_pred             hhhcccccccCCCHHHHHHHHh----ccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhH
Confidence            1      11111110    111    2358889999999865 488887 7788888876543222   11111111111


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-Hc
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QA  403 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~  403 (457)
                      .+...+|+...+ .....+-.++.++|.+.|.+    .|++++.+.+++.+.+....-... +..+.-++.++.+|- +.
T Consensus       296 ~ala~gL~e~~~-~~y~~~r~~~a~~La~~L~~----~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~  370 (450)
T TIGR02618       296 EAMAIGIREAVD-YEYIEHRVKQVRYLGDKLKA----AGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVET  370 (450)
T ss_pred             HHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHH----CCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHh
Confidence            111112322211 13445555678999999999    689887778888888865531111 112224556666664 34


Q ss_pred             CeeEecc------ccCcc-ccC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        404 GFAITCP------SHLDQ-EAK-KQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       404 Gi~v~~~------~~~~~-~~~-~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ||-..-.      ..|.. +.. ..-..+|+++| -..|.+++|.+.+++..+.+..
T Consensus       371 gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  427 (450)
T TIGR02618       371 GVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR  427 (450)
T ss_pred             CccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence            6654321      11211 111 11357999875 4569999999999999887654

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.79  E-value=2e-16  Score=154.35  Aligned_cols=309  Identities=12%  Similarity=0.080  Sum_probs=193.0

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEe-----------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYF-----------  191 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~-----------  191 (457)
                      .+...+||+.+++++|.+.++.++||+.|+..+....+++||.|  ...+|..+..+ +...|+...-+           
T Consensus        77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~  154 (460)
T PRK13237         77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD  154 (460)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccC
Confidence            34467899999999999999999999999888777778999965  66666666555 66667543322           


Q ss_pred             ---cC-CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-CCCC---ChHHHHHHHHHcCcEEEEEcCcccccc--
Q psy15447        192 ---KH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-ADIC---PLKDILSLRSKYQARIFVDESVSFGTL--  261 (457)
Q Consensus       192 ---~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-G~i~---~l~~i~~l~~~~g~~li~DEa~~~g~~--  261 (457)
                         .. .|++.+++.|++..       ..+++++.++-..|.. |...   ++++|+++|++||+.||+|.++.+|..  
T Consensus       155 ~p~tgnlD~d~Le~~I~~~~-------~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f  227 (460)
T PRK13237        155 HPFKGNVDLDKLQALIDEVG-------AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF  227 (460)
T ss_pred             CCCCCCcCHHHHHHHhcccc-------CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence               21 28999999997532       1334444444444444 5555   479999999999999999999987621  


Q ss_pred             ------cCCCCccc----cccCCCCCCccEEEecCcccccC-cccEEEe-cHHHHHHHHhhCCcc-eec--CCCcH-HHH
Q psy15447        262 ------GSTGHGVT----EYFGVSTEEVDMIIGSLEHALGS-VGGFCVG-SSYIIEHHRLSGSGY-CFS--ASLPP-FLA  325 (457)
Q Consensus       262 ------g~~g~~~~----~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~-~~~~~~~~~~~~~~~-~~~--~~~~~-~~~  325 (457)
                            |..+....    +.+    .-.|+++.|++|.++. .||+++. ++++.+.++.....+ .|.  +.+.. -..
T Consensus       228 I~~re~~y~~~~i~ei~~e~~----s~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~  303 (460)
T PRK13237        228 IKEREEGYQDKSIKEIVHEMF----SYADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDME  303 (460)
T ss_pred             hcccccccCCCcHhHHhhhcc----CcCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHH
Confidence                  11111110    111    2348899999999964 4787655 567777776543222 111  11211 111


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-Hc
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-QA  403 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-~~  403 (457)
                      |.+....+.++.  +..++.-++.++|.+.|.+    .|+++..+.+++.+++....-... +..+.-++.++.+|- +.
T Consensus       304 alAvgl~E~~~~--~y~~~ri~~~~~l~~~L~~----~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~  377 (460)
T PRK13237        304 AMAIGIEESVQY--EYIEHRVGQVRYLGEKLLA----AGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIES  377 (460)
T ss_pred             HHHhHHHhhchH--HHHHHHHHHHHHHHHHHHH----CCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHh
Confidence            222222222222  3555666688999999998    899998777788777754321100 111123456666654 34


Q ss_pred             CeeEecc------ccCcc-ccC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        404 GFAITCP------SHLDQ-EAK-KQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       404 Gi~v~~~------~~~~~-~~~-~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ||-..-.      ..|.. +.. ..-..+|+++| -..|.+++|.+.+++..+.+..
T Consensus       378 GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~  434 (460)
T PRK13237        378 GVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR  434 (460)
T ss_pred             CcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence            6654311      12211 111 11367999875 4569999999999999887654

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.79  E-value=7.5e-17  Score=157.36  Aligned_cols=306  Identities=11%  Similarity=0.048  Sum_probs=201.6

Q ss_pred             ChhhHHHHHHHHHhcC-----CCCCCCCCcccChHHHHHHHHHHHhhcCC-C--cEEEe-cccHHHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNG-----VGSCGPRGFYGTNVVHLDLENDIASFMGL-E--ETALY-SFGFSTSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~-----~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~-~sG~~a~~~ai~a~~~~gd~  166 (457)
                      +++|++|+.+.+..+.     ...-+.|.. --.+...+..++|+++++. +  .++++ +||+.++++++..+..+|+.
T Consensus        15 p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~-~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~   93 (360)
T PRK05355         15 PEEVLEQAQQELLDWNGSGMSVMEISHRSK-EFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK   93 (360)
T ss_pred             CHHHHHHHHHHhhccccCCccccccCCCCH-HHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe
Confidence            5789999888876542     111111110 0137788899999999995 2  35444 67888999999998888765


Q ss_pred             EEE-eCcccHHH-HHHHHhcCCeEE-Eec----CCCHHHHHH-HHHhhchhcccCCCCccEEEEEecCCCCCCCCC-ChH
Q psy15447        167 VFV-DENINFAI-QTGLIASRCKVQ-YFK----HNNMQHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-PLK  237 (457)
Q Consensus       167 v~~-~~~~h~~~-~~~~~~~g~~~~-~~~----~~d~~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~l~  237 (457)
                      +.+ ..+.++.. ..-++..|.... ..+    ..+..++++ .++           ++.++|.+.+.-+.+|.+. |++
T Consensus        94 ~l~i~~G~fg~r~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~l~-----------~~~~~V~~th~eTstGv~~~~i~  162 (360)
T PRK05355         94 ADYVDTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPPLDEWQLS-----------DDAAYVHYTSNETIDGTEFHELP  162 (360)
T ss_pred             EEEEECCHHHHHHHHHHHHhCCceEEecccccCCCCCCChhhccCC-----------CCCCEEEEccCCCcceEecCccc
Confidence            433 33333332 333444454321 111    112233333 332           2346888888888899997 677


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhh-C----
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLS-G----  311 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~-~----  311 (457)
                      +|      ||+++++|.++++|..           .++.++.|+++.|.+|++|++| |+++.++++++.+... .    
T Consensus       163 ~i------~g~l~vVDavss~g~~-----------~idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~~~~~  225 (360)
T PRK05355        163 DT------GDVPLVADMSSDILSR-----------PIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIPSMLD  225 (360)
T ss_pred             cc------CCCcEEEEcCccccCc-----------cCCHHHccEEEEeccccccCCceEEEEECHHHHhhcccCCChHHH
Confidence            66      8999999999987643           2333445799999999999776 8899999888775431 1    


Q ss_pred             ------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CCC-CeEEE
Q psy15447        312 ------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RDT-PLKYL  378 (457)
Q Consensus       312 ------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~~-~~~~i  378 (457)
                            ..... +++|-....+..++|+++.+.   +.+.++.+++.+++++.|+++    ++ ....+  ..+ .++.+
T Consensus       226 ~~~~~~~~~~~-~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~~~~~~~~rs~~v~sf  300 (360)
T PRK05355        226 YKTHADNDSMY-NTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYRNPVAPEDRSRMNVPF  300 (360)
T ss_pred             HHHHHhcCCcc-CCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcccCCChhhcCCcEEEE
Confidence                  01111 234555666667889888654   467788899999999999993    32 11111  223 45666


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .+++..       ...++.+.+.++|+.+.+...       ..+.+|+++...+|++|||+++++|++++.
T Consensus       301 ~~~~~~-------~~~~~~~~~~~~Gi~~~~~~~-------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~  357 (360)
T PRK05355        301 TLADEE-------LDKKFLAEAKAAGLVGLKGHR-------SVGGMRASIYNAMPLEGVQALVDFMKEFER  357 (360)
T ss_pred             EcCChH-------HHHHHHHHHHHCCCcccCCCC-------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            665532       335677788889998743321       236899999999999999999999999765

>PLN02263 serine decarboxylase

Probab=99.79  E-value=6.2e-16  Score=152.24  Aligned_cols=288  Identities=8%  Similarity=0.011  Sum_probs=193.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCc----EEEecccHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--
Q psy15447        123 TNVVHLDLENDIASFMGLEE----TALYSFGFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKHN--  194 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--  194 (457)
                      +.+...++-+.+++++|.+.    ..++++|+++|..++.+..+  +..+++++...|.++.+++++.|.+++.++.+  
T Consensus       131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~  210 (470)
T PLN02263        131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVS  210 (470)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence            45566667777777787532    57889999999999987654  33478889999999999999999888877643  


Q ss_pred             ---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc-----EEEEEcCcccccccCCCC
Q psy15447        195 ---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA-----RIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       195 ---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~-----~li~DEa~~~g~~g~~g~  266 (457)
                         |+++|++.|.+..        ..+.+|+..-...++|.+.|+++|.++|++||+     ||++|.+++...+.. .+
T Consensus       211 g~mD~~aL~~aI~~d~--------~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf-~~  281 (470)
T PLN02263        211 GEIDCADFKAKLLANK--------DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPF-VK  281 (470)
T ss_pred             CcCcHHHHHHHHHhCC--------CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhh-cc
Confidence               7999999887632        234566666666689999999999999999997     999999997554421 11


Q ss_pred             ccccccCCCCCCccEEEecCcccccCc--ccEEEecHHHHHHHHhh-----CCcceecCCCcHHHHHHHHHHHHHHhh--
Q psy15447        267 GVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFLAVAANKALHLLKA--  337 (457)
Q Consensus       267 ~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~aaa~a~l~~~~~--  337 (457)
                      .. +.+... ..+|.+..+.||.++.+  .|+++.++...+.+...     ....+..++-+.......-.+|+.+..  
T Consensus       282 ~~-~~~df~-~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G  359 (470)
T PLN02263        282 RA-PKVTFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRG  359 (470)
T ss_pred             cc-cccCCC-cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHH
Confidence            11 112211 23789999999999743  46666665544333111     011122222222112222233443322  


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                      ..+..++..++++++.+.|++    .|+.....+...++.+..+.+.               ...+|-.+.+.       
T Consensus       360 ~~~~i~~~~~~A~~l~~~l~~----~g~~~~~~p~s~~V~f~~p~~~---------------~~~~gW~L~~~-------  413 (470)
T PLN02263        360 FQKEVQKCLRNAHYLKDRLRE----AGISAMLNELSSTVVFERPKDE---------------EFVRRWQLACQ-------  413 (470)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh----CCCeEEeCCCceEEEEecCchH---------------HhhcceEEccC-------
Confidence            234667777889999999998    5777666666777666533211               12456655442       


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                         ++.+++++...++++.+|++++-|++..+.
T Consensus       414 ---~~~~Hivvmphv~~~~id~fi~DL~~~~~~  443 (470)
T PLN02263        414 ---GNIAHVVVMPSVTIEKLDYFLKELVEKRST  443 (470)
T ss_pred             ---CCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence               246889888878999999999999887763

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.79  E-value=5.8e-16  Score=156.65  Aligned_cols=288  Identities=15%  Similarity=0.160  Sum_probs=181.4

Q ss_pred             EEEecccHHHHHHHHHhhcC--------------------------CCCEEEEeCcccHHHHHHHHhcCC---eEEEecC
Q psy15447        143 TALYSFGFSTSASAIAAYVK--------------------------RNDAVFVDENINFAIQTGLIASRC---KVQYFKH  193 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~--------------------------~gd~v~~~~~~h~~~~~~~~~~g~---~~~~~~~  193 (457)
                      .+++++|++||..|+.+...                          ++..|+++...|.++.+++.+.|.   +++.++.
T Consensus       162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~  241 (522)
T TIGR03799       162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT  241 (522)
T ss_pred             eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence            47788999999988754321                          234788899999999999988886   5665553


Q ss_pred             C-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc-CCCCc
Q psy15447        194 N-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG-STGHG  267 (457)
Q Consensus       194 ~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g-~~g~~  267 (457)
                      +     |+++|++.|++....     .....+|+.....+.+|.+.|+++|.++|++||+++++|.+|+.+.+- ...+.
T Consensus       242 d~~g~~d~~~L~~~i~~~~~~-----g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~  316 (522)
T TIGR03799       242 DANNRIDVDALRDKCAELAEQ-----NIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRH  316 (522)
T ss_pred             CCCCcCCHHHHHHHHHHHHHC-----CCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHH
Confidence            2     799999999754321     122334444445557999999999999999999999999998754321 10000


Q ss_pred             cccccCCCCCCccEEEecCccccc-Ccc-cEEEe-cHHHHHHHHhhC-----------CcceecCCCcHHHHHHHHHHHH
Q psy15447        268 VTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVG-SSYIIEHHRLSG-----------SGYCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       268 ~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~-~~~~~~~~~~~~-----------~~~~~~~~~~~~~~aaa~a~l~  333 (457)
                      .  ..++  .++|.++.+.||+++ +.| |+++. ++...+.+....           ..+.+.++-+..+ ...-++++
T Consensus       317 ~--l~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~  391 (522)
T TIGR03799       317 L--LKGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLH  391 (522)
T ss_pred             H--hcCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHH
Confidence            0  1233  356999999999774 333 66554 455545443210           0122333323322 22345566


Q ss_pred             HHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc---------------hHHHHHHHHHH
Q psy15447        334 LLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD---------------EVASKKLLQTI  396 (457)
Q Consensus       334 ~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~~~~~~~~~~  396 (457)
                      .+...  ..+.++..+++++|.+.|++   .+++++..++...++.+.+....-               .+........+
T Consensus       392 ~lG~~G~~~ii~~~~~la~~l~~~L~~---~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i  468 (522)
T TIGR03799       392 IIGRKGYELLIDQSIEKAKYFADLIQQ---QPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFI  468 (522)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHhh---CCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHH
Confidence            65432  46778888999999999988   679999877777788877643210               01112234577


Q ss_pred             HHHHHHcCeeEec-ccc-CccccCCCCCeEEEEe-cCCCCHHHHHHHHHH
Q psy15447        397 CDMCIQAGFAITC-PSH-LDQEAKKQKPSIRITC-NISHTEQDMNSLIET  443 (457)
Q Consensus       397 ~~~l~~~Gi~v~~-~~~-~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~  443 (457)
                      .+++.+.|..... ... +......+...+|+++ +..+|+++|+.+++-
T Consensus       469 ~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       469 QKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             HHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence            8888888855432 211 1000011225699998 556778899887653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.78  E-value=1.3e-16  Score=166.87  Aligned_cols=306  Identities=10%  Similarity=0.062  Sum_probs=195.9

Q ss_pred             CcccChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447        119 GFYGTNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCKVQ  189 (457)
Q Consensus       119 ~~~g~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~~~  189 (457)
                      ...|+.....++++.+++++|.+.+-+.. +|+.+..+++.+..        ..++.|+++...|++....+...|.+++
T Consensus       537 ~sQG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv  616 (954)
T PRK12566        537 QAEGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVV  616 (954)
T ss_pred             hhcCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEE
Confidence            35678889999999999999999875554 77766655554432        2346888999999777666778899998


Q ss_pred             EecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447        190 YFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGST  264 (457)
Q Consensus       190 ~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~  264 (457)
                      .++.+     |+++|++.+.+..        +++++|++..+.+.++...|+++|.++|+++|+++++|.++..+..+- 
T Consensus       617 ~Vp~D~~G~iDle~L~a~I~~~~--------~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l-  687 (954)
T PRK12566        617 IVECDPDGNVDLDDLKAKAAAAG--------DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGL-  687 (954)
T ss_pred             EeccCCCCCcCHHHHHHHhhccC--------CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCC-
Confidence            88763     7899999997543        467777777777555555679999999999999999999986543221 


Q ss_pred             CCccccccCCCCCCccEEEecCcccccC---cc----cEEEecHHHHHHHHhhC-------CcceecCC-CcHHHHHHHH
Q psy15447        265 GHGVTEYFGVSTEEVDMIIGSLEHALGS---VG----GFCVGSSYIIEHHRLSG-------SGYCFSAS-LPPFLAVAAN  329 (457)
Q Consensus       265 g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~g----G~v~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~aaa~  329 (457)
                          .   .....++|+++++++|+||.   .|    |.+..++.+...++...       .+..-+.+ .+...+..+.
T Consensus       688 ----~---~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~  760 (954)
T PRK12566        688 ----A---RPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILP  760 (954)
T ss_pred             ----C---ChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHH
Confidence                0   00113569999999999963   22    34444555544444211       00000111 1111112233


Q ss_pred             HHHHHHhh-CcHH---HHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447        330 KALHLLKA-NPSL---LTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTICDMCIQ  402 (457)
Q Consensus       330 a~l~~~~~-~~~~---~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~l~~  402 (457)
                      +++.++.. ..++   .+....++.|+.+.|.+   ..++.+. ...+++   +.+.+..-..  .......++.++|++
T Consensus       761 ~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~---~~~v~~~-~~~~~~~hEfii~~~~l~~--~~g~~~~dvakRL~d  834 (954)
T PRK12566        761 ISWMYIAMMGPQLADASEVAILSANYLANQLGG---AFPVLYR-GRNERVAHECILDLRPLKA--QTGISEEDVAKRLMD  834 (954)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh---hCCCCcC-CCCCCeeeEEEEEcccccc--ccCCCHHHHHHHHHH
Confidence            34444332 1222   12224588899999976   2343332 222221   2222221000  000134679999999


Q ss_pred             cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .||......+      +..+.+|++++...|++|||+++++++.+.+++.
T Consensus       835 ~Gihapt~~f------Pv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~  878 (954)
T PRK12566        835 YGFHAPTMSF------PVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG  878 (954)
T ss_pred             CCcEEeEEee------ccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence            9998765443      2368999999999999999999999999988864

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.77  E-value=3.1e-16  Score=164.98  Aligned_cols=305  Identities=10%  Similarity=0.058  Sum_probs=200.6

Q ss_pred             CcccChHHHHHHHHHHHhhcCCCcE-EEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447        119 GFYGTNVVHLDLENDIASFMGLEET-ALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCKVQ  189 (457)
Q Consensus       119 ~~~g~~~~~~~l~~~la~~~g~~~~-i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~~~  189 (457)
                      ...|......++++.|++++|.+.+ +..++|+.+..+++.+..        .+.+.|+++...|++....+...|.+++
T Consensus       524 ~sqG~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv  603 (939)
T TIGR00461       524 QVEGYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVV  603 (939)
T ss_pred             HhHHHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEE
Confidence            4567788999999999999999865 455667766554443332        2346899999999888888889999988


Q ss_pred             EecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        190 YFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       190 ~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      .++.+     |+++|++.++++.        +++++|++..+++ .|.+.| +++|.++|+++|.++++|.++..+..+.
T Consensus       604 ~V~~d~~G~iDle~L~~~i~~~~--------~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l  674 (939)
T TIGR00461       604 PVNCDQDGNIDLVDLKNKAEQHG--------DELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL  674 (939)
T ss_pred             EeccCCCCCcCHHHHHHHHhhcC--------CceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCC
Confidence            88763     8999999997532        4567888877776 688877 9999999999999999999986432221


Q ss_pred             CCCccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhhCC-------------cceec-CCCcH
Q psy15447        264 TGHGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLSGS-------------GYCFS-ASLPP  322 (457)
Q Consensus       264 ~g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~~~-------------~~~~~-~~~~~  322 (457)
                      .        .....++|++++|.+|+|+.      +| |+++.++.+..++.....             +.+.+ ...+.
T Consensus       675 ~--------~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a  746 (939)
T TIGR00461       675 T--------SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSA  746 (939)
T ss_pred             C--------CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcH
Confidence            1        00113569999999998852      22 788888776655421100             00001 01122


Q ss_pred             HHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CCCe---EEEEecCCcchHHHHHHHHHH
Q psy15447        323 FLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DTPL---KYLYLQKSDDEVASKKLLQTI  396 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~---~~i~~~~~~~~~~~~~~~~~~  396 (457)
                      ..+-.+..-+..+..+  .+..+..-.+++|+.+.|++     ++++..+. .+++   +.+.+....  +.......++
T Consensus       747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-----~~~~l~~~~~~~~~hEfv~~~~~~~--~~~g~~~~dI  819 (939)
T TIGR00461       747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-----HYPILFVGTLKHVAHECILDLRPLK--AKTGIEAIDV  819 (939)
T ss_pred             HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-----cCcccccCCCCceeEEEEEeccchh--hhcCCCHHHH
Confidence            2222222223434322  23445566688999999977     23333222 2232   223332110  0001146789


Q ss_pred             HHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        397 CDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       397 ~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .++|++.|+......||      ..+.+.|.|+-..|++|||++++++.++.+++.+
T Consensus       820 akrL~d~G~hapt~~~p------v~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       820 AKRLQDYGFHAPTLSFP------VPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             HHHHHhCCeeccccCCc------cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999976544332      2458889999999999999999999999888765

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.77  E-value=2.7e-16  Score=161.47  Aligned_cols=305  Identities=12%  Similarity=0.078  Sum_probs=196.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------  194 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------  194 (457)
                      ......+.++..|+.+|.+++.|+++|+ .+|..++.+++++||.|++++.+|-++..++.++|+..+++...       
T Consensus       193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~  272 (714)
T PRK15400        193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGIL  272 (714)
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCc
Confidence            3556788999999999999999998886 67899999999999999999999999999999999988876421       


Q ss_pred             ---C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccc-cccCCC
Q psy15447        195 ---N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFG-TLGSTG  265 (457)
Q Consensus       195 ---d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g-~~g~~g  265 (457)
                         +     ++.+++.+++....     ..+..+|++.|-+  .|.+.++++|.++|+.++  +++||||+.- .+.+.-
T Consensus       273 g~I~~~~~~~e~i~~~i~~~p~a-----k~p~~~vit~pTY--dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~  343 (714)
T PRK15400        273 GGIPQSEFQHATIAKRVKETPNA-----TWPVHAVITNSTY--DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY  343 (714)
T ss_pred             cCCCccccCHHHHHHHHHhCccc-----cCccEEEEECCCC--ccEecCHHHHHHHhCCCC--EEEEccchhhhccCccc
Confidence               3     78899988765310     0112466666544  599999999999999888  6899998632 122211


Q ss_pred             Ccccc-ccCCCCCCccEEEecCcccccCc--ccEEEecHHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--Cc
Q psy15447        266 HGVTE-YFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NP  339 (457)
Q Consensus       266 ~~~~~-~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~  339 (457)
                      ++... ..|-++++..+++.|.||.+++.  ++++-.+..+- +.+.. ......|+|++.+.+|..-.+..+++.  ..
T Consensus       344 ~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~-a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~  422 (714)
T PRK15400        344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNE-AYMMHTTTSPHYGIVASTETAAAMMKGNAGK  422 (714)
T ss_pred             CCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHH-HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence            10010 12222232238999999999642  22221111111 11211 111223344455555555566666653  35


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccCC------eEEeccCC----------------------------CCe-EEEEecC-C
Q psy15447        340 SLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHRD----------------------------TPL-KYLYLQK-S  383 (457)
Q Consensus       340 ~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~~----------------------------~~~-~~i~~~~-~  383 (457)
                      ++.+...+.+..+++.|.+   +.+      +.+..+..                            -|+ +.+..+. +
T Consensus       423 ~l~~~~i~~a~~~R~~l~~---~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~  499 (714)
T PRK15400        423 RLINGSIERAIKFRKEIKR---LRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMK  499 (714)
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCC
Confidence            6778888889999998877   334      44432110                            011 1111111 0


Q ss_pred             cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        384 DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       384 ~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ...  +.....+..+.+.|.++||.+....         .+.+-+.++...|+++++.++++|.++-+
T Consensus       500 ~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLfl~s~g~t~~~~~~L~~aL~~f~~  558 (714)
T PRK15400        500 KDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLFLFSIGIDKTKALSLLRALTDFKR  558 (714)
T ss_pred             CCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            000  0011235578889999999886543         46788888889999999999999988744

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.77  E-value=4.2e-16  Score=160.15  Aligned_cols=308  Identities=12%  Similarity=0.062  Sum_probs=192.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEecCC------
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFKHN------  194 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~~~------  194 (457)
                      ......+.++..|+.+|.+++.|+.+|+ .+|.+++.+.+++||.|++++.+|-++..+ +.++|+..+++...      
T Consensus       172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi  251 (720)
T PRK13578        172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGF  251 (720)
T ss_pred             CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCC
Confidence            4566788899999999999999888887 579999999999999999999999999986 99999888775421      


Q ss_pred             ----C-----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH-HHHcCcEEEEEcCcccc-cccC
Q psy15447        195 ----N-----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL-RSKYQARIFVDESVSFG-TLGS  263 (457)
Q Consensus       195 ----d-----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l-~~~~g~~li~DEa~~~g-~~g~  263 (457)
                          +     .+.+++.|++...+.....++.+.+|++.|-+  .|.+.++++|.++ |+.++ .|++||||+.- .+.+
T Consensus       252 ~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p  328 (720)
T PRK13578        252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIP  328 (720)
T ss_pred             cCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCc
Confidence                3     45588888775211001111123455555544  5999999999998 68888 99999998632 2222


Q ss_pred             CCCccccccCCCCCCcc----EEEecCcccccCc--ccEEEecHHHH---------HHHHhhCCccee-cCCCcHHHHHH
Q psy15447        264 TGHGVTEYFGVSTEEVD----MIIGSLEHALGSV--GGFCVGSSYII---------EHHRLSGSGYCF-SASLPPFLAVA  327 (457)
Q Consensus       264 ~g~~~~~~~~~~~~~~D----i~~~s~sK~lg~~--gG~v~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~aa  327 (457)
                      ..+++... .+. .+.|    +++.|.||.+++.  ++++-.+...+         +.++...  ..+ |+|++.+.+|.
T Consensus       329 ~~~~~p~~-al~-~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al--~m~qSTSPsY~LmAS  404 (720)
T PRK13578        329 MMADCSPL-LLE-LNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAF--MLHASTSPFYPLFAA  404 (720)
T ss_pred             ccccCChh-hhh-cCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHH--HHHcCCChHHHHHHH
Confidence            11111111 111 2345    9999999999642  34442222111         1222111  123 33434444343


Q ss_pred             HHHHHHHHhh--CcHHHHHHHHHHHHHHHHh-hcccccCCeEEeccC--------------------------C------
Q psy15447        328 ANKALHLLKA--NPSLLTKLREKCNTMHSLL-SQHKVTQRFLVQGHR--------------------------D------  372 (457)
Q Consensus       328 a~a~l~~~~~--~~~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~~--------------------------~------  372 (457)
                      .-.+-++++.  ..++.+...+.+..+++.| +.   ..++.+..+.                          +      
T Consensus       405 LDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~---~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf  481 (720)
T PRK13578        405 LDVNAKMHEGESGRRLWMECVKLGIEARKLILAR---CKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGF  481 (720)
T ss_pred             HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHh---CCCeeecccccccccccccCchhhhcccccccccccCcccccc
Confidence            3344555543  3567788888888888887 44   3444443110                          0      


Q ss_pred             ----------CCe-EEEEecCCc--ch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        373 ----------TPL-KYLYLQKSD--DE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       373 ----------~~~-~~i~~~~~~--~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                                -|+ +.+...+-.  ..  +..+.-+..+.+.|+++||.+-...         .+.+-+.++...|++++
T Consensus       482 ~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~l~s~g~t~~~~  552 (720)
T PRK13578        482 EGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILFLLTPAEDMAKL  552 (720)
T ss_pred             ccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHH
Confidence                      011 111111100  00  0001125678889989999886543         35777888888999999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        438 NSLIETLCKSHD  449 (457)
Q Consensus       438 ~~~~~~l~~~~~  449 (457)
                      ++++++|.++.+
T Consensus       553 ~~Lv~aL~~f~~  564 (720)
T PRK13578        553 QQLVAMLARFEK  564 (720)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998754

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.75  E-value=1.7e-15  Score=155.59  Aligned_cols=303  Identities=12%  Similarity=0.086  Sum_probs=192.5

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------  194 (457)
                      .....+.++..|+.+|.+++.|+.+|+ .+|..++.+.+.+||.|++++.+|-++..++.++|+..+++...        
T Consensus       194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g  273 (713)
T PRK15399        194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG  273 (713)
T ss_pred             ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence            456778889999999999999998886 67999999999999999999999999999999999988876421        


Q ss_pred             --CH-----HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEE-EEEcCcccc-cccCCC
Q psy15447        195 --NM-----QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARI-FVDESVSFG-TLGSTG  265 (457)
Q Consensus       195 --d~-----~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~l-i~DEa~~~g-~~g~~g  265 (457)
                        ++     +.+++.+++....     +.++++|++.|-+  .|.+.++++|.++|   |+.+ ++||||+.- .+.+..
T Consensus       274 ~I~~~~~~~e~I~~~i~~~p~~-----~~p~~vvit~pTY--dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~  343 (713)
T PRK15399        274 GIPRREFTRDSIEEKVAATTQA-----QWPVHAVITNSTY--DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY  343 (713)
T ss_pred             CCChhhccHHHHHHHHHhCCCc-----CCceEEEEECCCC--CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence              23     8888888775310     0113556665544  59999999999999   5666 699998631 122211


Q ss_pred             CccccccCC-CCCCccEEEecCcccccC--cccEEEecHHHH-HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--Cc
Q psy15447        266 HGVTEYFGV-STEEVDMIIGSLEHALGS--VGGFCVGSSYII-EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NP  339 (457)
Q Consensus       266 ~~~~~~~~~-~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~  339 (457)
                      .+.....+. .+|-+.+++.|.||.+++  .++++-.+..+- +.+.. ......|+|++.+.+|..-.+.++++.  ..
T Consensus       344 ~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~-a~~m~~STSPsY~LmASLD~a~~~m~~~~G~  422 (713)
T PRK15399        344 QGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNE-AFMMHTSTSPSYPIVASVETAAAMLRGNPGK  422 (713)
T ss_pred             CCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHH-HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence            111111111 122223449999999964  234543332221 12221 111223344455555555556666653  35


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccCC------eEEeccC--------------C--------------CCe-EEEEecCC-
Q psy15447        340 SLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHR--------------D--------------TPL-KYLYLQKS-  383 (457)
Q Consensus       340 ~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~--------------~--------------~~~-~~i~~~~~-  383 (457)
                      ++.+...+.+..+++.|.++   .+      +.+..+.              .              -|+ +.+..+.- 
T Consensus       423 ~l~~~~i~~a~~fR~~l~~~---~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~  499 (713)
T PRK15399        423 RLINRSVERALHFRKEVQRL---REESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMD  499 (713)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---cccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcc
Confidence            67788888888899888763   22      2332110              0              011 11111110 


Q ss_pred             cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        384 DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       384 ~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ...  +.....+..+.+.|.++||.+....         .+.+-+.++...|++++++++++|.++-+
T Consensus       500 ~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~l~s~g~t~~~~~~L~~aL~~f~~  558 (713)
T PRK15399        500 EQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLFLFSIGIDKTKAMGLLRGLTEFKR  558 (713)
T ss_pred             cccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            000  0112245678889999999886544         36788888889999999999999987744

>KOG0633|consensus

Probab=99.71  E-value=1.7e-15  Score=132.71  Aligned_cols=285  Identities=17%  Similarity=0.167  Sum_probs=189.1

Q ss_pred             HHHHHHHhhcCCC-cEEEecccH-HHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHH
Q psy15447        129 DLENDIASFMGLE-ETALYSFGF-STSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLE  200 (457)
Q Consensus       129 ~l~~~la~~~g~~-~~i~~~sG~-~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le  200 (457)
                      ++...++.--+.. +-+...-|+ +.+.+.|++.|.|| +.|+.-.+.|.-+.-.+.+.++.++.++.+     +.+++.
T Consensus        73 ~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~  152 (375)
T KOG0633|consen   73 RLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIA  152 (375)
T ss_pred             hhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHH
Confidence            3444444433322 446666666 77888999999999 678777777766555667788888888765     577777


Q ss_pred             HHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc-CcEEEEEcCcc-cccccCCCCccccccCCCCCC
Q psy15447        201 ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY-QARIFVDESVS-FGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       201 ~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~-g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +.++..         ..+++++..++.||+|.+...+.|.++.+.- +.++++||+|- |...+.+-.+..++-+     
T Consensus       153 evl~~d---------s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpN-----  218 (375)
T KOG0633|consen  153 EVLELD---------SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPN-----  218 (375)
T ss_pred             HHHhcc---------ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCc-----
Confidence            777642         3678899999999999999988888888754 78999999984 3222221122222222     


Q ss_pred             ccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH--HHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALH--LLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~--~~~~~~~~~~~l~~~~~~l~  353 (457)
                       -+++.|+||.+|..|   ||.+.+..+++.+.....+|..+..    ...+|++++.  -.+..+..+..+.+...++.
T Consensus       219 -LivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS~~----~s~~AL~Als~~n~kkme~~rdaiv~er~RL~  293 (375)
T KOG0633|consen  219 -LIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNISVA----GSVAALAALSDSNGKKMEDVRDAIVRERERLF  293 (375)
T ss_pred             -eeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCccccch----hHHHHHHhcCcccchHHHHHHHHHHHHHHHHH
Confidence             267889999999776   9999999999988766666655432    2233444432  11122335666667777787


Q ss_pred             HHhhcccccCCeE-EeccCCCCeEEEEecCCcchHHHHHHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447        354 SLLSQHKVTQRFL-VQGHRDTPLKYLYLQKSDDEVASKKLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS  431 (457)
Q Consensus       354 ~~L~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~  431 (457)
                      +.|.+   ++++. +++....+++.+++.+....     .+..+. +.+.+.||.++-.+-    ...-.+++||+..  
T Consensus       294 keLt~---v~~~~~~~gg~daNFiLi~v~~~~n~-----~akkly~q~at~~gVvVRfrgs----e~~c~G~lRitvG--  359 (375)
T KOG0633|consen  294 KELTE---VPFLNDYPGGSDANFILIEVTGGDNG-----MAKKLYKQDATKMGVVVRFRGS----EEGCKGYLRITVG--  359 (375)
T ss_pred             HHhhc---CccccCCCCcccccEEEEEEcCCCcH-----HHHHHHHHHHHhcceEEEEcCC----ccccceeEEEEcC--
Confidence            88888   44443 34455677888877654311     333444 444566999875431    0123679999996  


Q ss_pred             CCHHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCKS  447 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~  447 (457)
                       |+|+-+-+++.++++
T Consensus       360 -t~EentvL~k~~K~~  374 (375)
T KOG0633|consen  360 -TPEENTVLMKCLKQF  374 (375)
T ss_pred             -CcccchHHHHHHHhh
Confidence             788888888888765

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.71  E-value=3.3e-16  Score=136.38  Aligned_cols=160  Identities=20%  Similarity=0.261  Sum_probs=123.5

Q ss_pred             HHHHHHHHHhhc--CCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH-HHHHhcCCeEEEecCCCH----HHH
Q psy15447        127 HLDLENDIASFM--GLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ-TGLIASRCKVQYFKHNNM----QHL  199 (457)
Q Consensus       127 ~~~l~~~la~~~--g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~-~~~~~~g~~~~~~~~~d~----~~l  199 (457)
                      +.++++.+++++  +.+.++++++|++|+..++.++.++++.|++..+.|.+.. ......|.++..++.++-    .++
T Consensus         2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~   81 (170)
T cd01494           2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV   81 (170)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence            467899999999  8888999999999999999999888999999988887777 777888988888775421    111


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      +...+...       ..++++++++++++++|...|+++|+++|+++|+++|+|++++.+..+..+      .+....++
T Consensus        82 ~~~~~~~~-------~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~~~  148 (170)
T cd01494          82 AILEELKA-------KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG------VLIPEGGA  148 (170)
T ss_pred             hhhhhccc-------cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc------cccccccC
Confidence            12111111       256789999999999999999999999999999999999999876554211      11222356


Q ss_pred             cEEEecCcccccCc-ccEEEe
Q psy15447        280 DMIIGSLEHALGSV-GGFCVG  299 (457)
Q Consensus       280 Di~~~s~sK~lg~~-gG~v~~  299 (457)
                      |+++.|++|++|+. +|+++.
T Consensus       149 d~~~~s~~K~~~~~~~G~l~~  169 (170)
T cd01494         149 DVVTFSLHKNLGGEGGGVVIV  169 (170)
T ss_pred             CEEEEEcccccCCCceEEEEe
Confidence            99999999999854 477765

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.71  E-value=5e-17  Score=152.57  Aligned_cols=259  Identities=15%  Similarity=0.146  Sum_probs=172.2

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCC
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKR  163 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~  163 (457)
                      ||.|-+     ++|++.+++.+...  |     .. .||..+...+|++++++++|.+.++|+.||+.||..+++++++|
T Consensus         1 Df~SD~-----~~~~m~~a~~~a~~--g-----d~-~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~   67 (290)
T PF01212_consen    1 DFRSDT-----PTPAMLEAMAAANV--G-----DD-AYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRP   67 (290)
T ss_dssp             EES-SS-----S-HHEEHHHHHTTS--B------C-CTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHT
T ss_pred             CCCccC-----CCHHHHHHHHcccc--C-----Cc-ccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhc
Confidence            666644     58999999844332  1     22 47889999999999999999999999999999999999999999


Q ss_pred             CCEEEEeCcccHHHHH--HH-HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCC
Q psy15447        164 NDAVFVDENINFAIQT--GL-IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADIC  234 (457)
Q Consensus       164 gd~v~~~~~~h~~~~~--~~-~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~  234 (457)
                      ++.|+.....|.....  +. .++|.++..++.     .++++|++.+.....   +.  .++++|.+|...+. +|.+.
T Consensus        68 ~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~---h~--~~~~~v~le~t~~~~GG~~~  142 (290)
T PF01212_consen   68 GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA---HH--PQPAVVSLENTTELAGGTVY  142 (290)
T ss_dssp             TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG---TS--GGEEEEEEESSBTTTTSB--
T ss_pred             CCceeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc---cC--CCccEEEEEecCcCCCCeeC
Confidence            9999999999876542  33 568888877653     369999999987542   11  46788899988875 47777


Q ss_pred             C---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhh
Q psy15447        235 P---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLS  310 (457)
Q Consensus       235 ~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~  310 (457)
                      +   +++|.++|++||+.|++|.+.-+-.....+..+.+..    ..+|++..|++|.+|. .|+++++++++++..+..
T Consensus       143 s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~  218 (290)
T PF01212_consen  143 SLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQ  218 (290)
T ss_dssp             -HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHHHHHHHHH
Confidence            7   6788889999999999999853221111111122222    3568999999999986 467889999876654322


Q ss_pred             CC---cceecCCCcHHHHH--HH-HHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC
Q psy15447        311 GS---GYCFSASLPPFLAV--AA-NKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR  371 (457)
Q Consensus       311 ~~---~~~~~~~~~~~~~a--aa-~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~  371 (457)
                      ..   +-.... .  +.++  .- ..++..++....+..+..++++++.+.|+.    .+..+..+.
T Consensus       219 ~k~~gg~~~~~-G--~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~----~~~~~~~~~  278 (290)
T PF01212_consen  219 RKRLGGGMRQA-G--VLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEA----LGGVLPRPV  278 (290)
T ss_dssp             HHHHTHHHHHT-T--HHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHE----ECEEEETTS
T ss_pred             HHHhccCeeec-c--eeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH----CCCcccCCC
Confidence            11   111111 1  2222  01 123333343334566777889999999988    555554443

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>KOG2862|consensus

Probab=99.70  E-value=7.7e-14  Score=125.60  Aligned_cols=290  Identities=15%  Similarity=0.073  Sum_probs=196.1

Q ss_pred             HHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEe-CcccHH-HHHHHHhcCCeEEEecCC-----CH
Q psy15447        127 HLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVD-ENINFA-IQTGLIASRCKVQYFKHN-----NM  196 (457)
Q Consensus       127 ~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~-~~~h~~-~~~~~~~~g~~~~~~~~~-----d~  196 (457)
                      ..++.+-+...|...   ..++..+|..+.++|+-.+..|||.|++- .+.++. ..+-.+..|+++..++..     .+
T Consensus        52 m~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~l  131 (385)
T KOG2862|consen   52 MDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPL  131 (385)
T ss_pred             HHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCcccCccH
Confidence            344444555555433   23566789999999999999999977653 334433 334566778888777532     68


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      +.+++.+.++          +..+|.+.+.-+.||...| +...-++|++|+++|++|.+.|.|...    ...+.    
T Consensus       132 e~i~~~lsqh----------~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~----F~mDe----  193 (385)
T KOG2862|consen  132 EEITEKLSQH----------KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTE----FEMDE----  193 (385)
T ss_pred             HHHHHHHHhc----------CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCcc----ceehh----
Confidence            8999999874          3467777788888999999 778889999999999999998876432    22333    


Q ss_pred             CCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCCc---c------------------eecCCCcHHHHHHHHHHH
Q psy15447        276 TEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGSG---Y------------------CFSASLPPFLAVAANKAL  332 (457)
Q Consensus       276 ~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~~---~------------------~~~~~~~~~~~aaa~a~l  332 (457)
                       .++|+....-.|++|.+.  +.+..++...+.++.....   +                  .|..+.|........++|
T Consensus       194 -wgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL  272 (385)
T KOG2862|consen  194 -WGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAAL  272 (385)
T ss_pred             -hcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHH
Confidence             455888878899998654  4577788888887643321   1                  112234555556667788


Q ss_pred             HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCe-EEEEecCCcchHHHHHHHHHHHHHHHHc-Ce
Q psy15447        333 HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPL-KYLYLQKSDDEVASKKLLQTICDMCIQA-GF  405 (457)
Q Consensus       333 ~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi  405 (457)
                      +.+-++  ++..++.++++++++..|++    .|++.....   ..|. -.+.++...       +-.+++.+++++ ++
T Consensus       273 ~~I~eeGL~~~~~rH~e~s~~l~~~l~~----~GLq~fv~~e~~rlptvttv~vp~gv-------Dw~dVv~~~~~~~~v  341 (385)
T KOG2862|consen  273 ALIAEEGLENSWRRHREMSKWLKLSLEA----LGLQLFVVDEELRLPTVTTVKVPYGV-------DWKDVVAYAMSHYVV  341 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCccceecChhhccCcceeeecCCCC-------CHHHHHHHHHHhcCE
Confidence            776554  56788999999999999998    565442211   1222 223333322       446889999998 55


Q ss_pred             eEeccccCccccCCCCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHh
Q psy15447        406 AITCPSHLDQEAKKQKPSIRITCNIS-HTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       406 ~v~~~~~~~~~~~~~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~  451 (457)
                      .+..+..     +..+-++||....+ -+.+-|+..++.|+.++.+.
T Consensus       342 ei~gglg-----~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~  383 (385)
T KOG2862|consen  342 EIGGGLG-----PTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK  383 (385)
T ss_pred             EeccccC-----CCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence            5544433     33467899986433 46788999999998887654

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.70  E-value=7.2e-15  Score=156.77  Aligned_cols=320  Identities=10%  Similarity=0.059  Sum_probs=207.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      ++-+.+|.+.++.++--++.+.+++.+-..-|. .++.-+...+|..+...+++..+++++|.+  .+-++.+++.+.+.
T Consensus       101 N~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea  180 (993)
T PLN02414        101 NKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEA  180 (993)
T ss_pred             CCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHH
Confidence            344677777766666444556577776554332 223223334677778889999999999976  46777788877666


Q ss_pred             HHHhh-cC--CCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        156 AIAAY-VK--RNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       156 ai~a~-~~--~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      ++.+. .+  +++.|++++..|+++...++    ..|.++..++..+.+       ...        +.+..++ .+.-+
T Consensus       181 ~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~-------~~~--------~~v~~vl-vq~P~  244 (993)
T PLN02414        181 MAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD-------YSS--------GDVCGVL-VQYPA  244 (993)
T ss_pred             HHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc-------ccc--------CceEEEE-EecCC
Confidence            65544 23  44789999999999776553    357788877653311       111        2233443 33444


Q ss_pred             CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc------cEEEecHH
Q psy15447        229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG------GFCVGSSY  302 (457)
Q Consensus       229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g------G~v~~~~~  302 (457)
                      .+|.+.|+++|.++||++|+++++ .++..+..+-.        .....++||++++.+|+.++.|      ||++.+++
T Consensus       245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~--------~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~  315 (993)
T PLN02414        245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK--------PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE  315 (993)
T ss_pred             CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC--------CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH
Confidence            689999999999999999999999 66655432210        1111356999999999983322      88999888


Q ss_pred             HHHHHHhh--C--------Ccce-----------e-cCCCcHHHHHHHHHHHH-----HH--hhCcHHHHHHHHHHHHHH
Q psy15447        303 IIEHHRLS--G--------SGYC-----------F-SASLPPFLAVAANKALH-----LL--KANPSLLTKLREKCNTMH  353 (457)
Q Consensus       303 ~~~~~~~~--~--------~~~~-----------~-~~~~~~~~~aaa~a~l~-----~~--~~~~~~~~~l~~~~~~l~  353 (457)
                      +.+.+...  +        ..+.           + .++.|.....+..+++.     ++  ....+..+++.+++.+++
T Consensus       316 ~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~  395 (993)
T PLN02414        316 YKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFA  395 (993)
T ss_pred             HHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence            76644210  0        1110           0 11234433333333332     11  112356788889999999


Q ss_pred             HHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447        354 SLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHT  433 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t  433 (457)
                      +.|++    .|+++..++....+.+.+++          ..++.++|.++||.++...         .+.+|+|++..+|
T Consensus       396 ~~L~~----~G~~~~~~~~f~~vt~~~~~----------~~~v~~~L~~~gI~l~~~~---------~~~lrvs~~e~~T  452 (993)
T PLN02414        396 AGLKK----LGFQVQSLPFFDTVKVKCSD----------ADAIADAAAKVGINLRVVD---------ANTVTVSFDETTT  452 (993)
T ss_pred             HHHhh----cCCccCCCCCcCeEEEecCC----------HHHHHHHHHHCCCeeEEec---------CCeEEEEeeccCC
Confidence            99987    67777544434455555432          2578999999999876542         3679999999999


Q ss_pred             HHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCK  446 (457)
Q Consensus       434 ~edi~~~~~~l~~  446 (457)
                      ++|||+++++|..
T Consensus       453 ~edId~L~~~l~~  465 (993)
T PLN02414        453 LEDVDKLFKVFAG  465 (993)
T ss_pred             HHHHHHHHHHHcc
Confidence            9999999999963

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.69  E-value=2.6e-14  Score=129.48  Aligned_cols=323  Identities=15%  Similarity=0.078  Sum_probs=204.6

Q ss_pred             cCCCCChhhHHHHHHHHHhcCCCCCCCCC--cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc--CCC
Q psy15447         91 LSFVENPDIEKCAIDCIDKNGVGSCGPRG--FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV--KRN  164 (457)
Q Consensus        91 l~~~~~p~i~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~--~~g  164 (457)
                      +|..++....+..+...++|+...-.+-+  -....+.-+.|-.+||-+.|..  +++++.+-+--+...+.+..  .+|
T Consensus        40 LGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~  119 (407)
T COG3844          40 LGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEG  119 (407)
T ss_pred             cccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCC
Confidence            45544444555555556666543222222  2234567788999999999954  44444444433344444443  347


Q ss_pred             CEEEEeCcccHHHH-----HHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        165 DAVFVDENINFAIQ-----TGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       165 d~v~~~~~~h~~~~-----~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      +.|++.+...+.+-     .-+.+.+......-...++++++.+.           +.+++|++.+++--||...++.+|
T Consensus       120 r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~-----------dd~AvV~L~~V~y~TGql~dm~ai  188 (407)
T COG3844         120 RRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAIT-----------DDVAVVLLSHVNYKTGQLLDMRAI  188 (407)
T ss_pred             ceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhc-----------cceEEEEeccccccccceeeHHHH
Confidence            77777665433211     11223232111111235777877775           467899999999899999999999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc--cEEEecHHHHHHH---------
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG--GFCVGSSYIIEHH---------  307 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g--G~v~~~~~~~~~~---------  307 (457)
                      -+++++||++++-|=+|+.|.+.-         .+...++|+-++|-.|.+ |++|  +++...++..+..         
T Consensus       189 T~~AH~~galv~wDLAHsaGavp~---------~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~g  259 (407)
T COG3844         189 TALAHQHGALVGWDLAHSAGAVPV---------DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWG  259 (407)
T ss_pred             HHHHHhcCceEEeehhcccCCcce---------eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccC
Confidence            999999999999999999887642         122356689999999999 4455  3444333222221         


Q ss_pred             -----------HhhCCcceecCC-CcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-
Q psy15447        308 -----------RLSGSGYCFSAS-LPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-  372 (457)
Q Consensus       308 -----------~~~~~~~~~~~~-~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-  372 (457)
                                 ........|-.+ .+-+.+++...+|++....  .+++++.-.+.++|.+.++......++++..+.. 
T Consensus       260 ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~  339 (407)
T COG3844         260 HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH  339 (407)
T ss_pred             CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh
Confidence                       000011112222 3444445555678887654  4677788888999999888754344677665432 


Q ss_pred             ---CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHH
Q psy15447        373 ---TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       373 ---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~  448 (457)
                         +..+.+..+          ...++.+.|.++||+..-         ..++.+||.+ |++.+-.|+=..+++|.+++
T Consensus       340 ~~rGsqvS~~hp----------~~~~V~qaLi~rGVigD~---------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL  400 (407)
T COG3844         340 EERGSQVSLYHP----------HGYQVMQALIDRGVIGDF---------REPDVLRFGFTPLYVSFVDVWDAVDALEEVL  400 (407)
T ss_pred             hhccceeeEecC----------cHHHHHHHHHHcCccccc---------cCCCeeeecCccceechhHHHHHHHHHHHHH
Confidence               445555444          345899999999997542         2358999998 68889999999999999999


Q ss_pred             HHhc
Q psy15447        449 DIAV  452 (457)
Q Consensus       449 ~~~~  452 (457)
                      +...
T Consensus       401 ~t~a  404 (407)
T COG3844         401 DTLA  404 (407)
T ss_pred             Hhhc
Confidence            8764

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.67  E-value=9.5e-14  Score=124.34  Aligned_cols=340  Identities=13%  Similarity=0.125  Sum_probs=203.1

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhc------CCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHH-
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKN------GVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFS-  151 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~-  151 (457)
                      .+.+.++|+.-   -|++.+..++...+.      +-.-|.+...+|...+...|...|.+-+|.   ++.+..++|++ 
T Consensus        32 ~imLggGNPa~---iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs  108 (417)
T COG3977          32 AIMLGGGNPAR---IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS  108 (417)
T ss_pred             ceeeCCCCccc---ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence            55566655432   367776666554432      222344555677788888888888888884   35677777774 


Q ss_pred             HHHHHHHhhcCC---C--CEEEE-eCcccHHHHHHHHhcCCeEEEec-------------CCCHHHHHHHHHhhchhccc
Q psy15447        152 TSASAIAAYVKR---N--DAVFV-DENINFAIQTGLIASRCKVQYFK-------------HNNMQHLEELLRQQDERDTL  212 (457)
Q Consensus       152 a~~~ai~a~~~~---g--d~v~~-~~~~h~~~~~~~~~~g~~~~~~~-------------~~d~~~le~~l~~~~~~~~~  212 (457)
                      +...+...+.++   |  +.|+. -.+.|..+.+.. +.+--.+.++             +.|.++|+-           
T Consensus       109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~-l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i-----------  176 (417)
T COG3977         109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG-LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI-----------  176 (417)
T ss_pred             hHHHHHHHhcCccCCCcceeEeeccChhhccccccc-cCccceeeccCCcccccccceeeccCHHHccc-----------
Confidence            555555554332   2  23333 233332222111 1110011111             235555532           


Q ss_pred             CCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA  289 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~  289 (457)
                        .+.+.+|++.-+.||||.+..   +.+|-+++++||+.||+|.+|+...-+-...-....|+   ++ -|.+.|+||.
T Consensus       177 --~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~---~N-iilC~SLSK~  250 (417)
T COG3977         177 --GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWN---EN-IILCMSLSKL  250 (417)
T ss_pred             --ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCC---CC-EEEEeehhhc
Confidence              145679999999999999865   77888899999999999999875432211111222333   22 3677899996


Q ss_pred             c--cCcccEEEecHHHHHHHHhhCCcc-eecCCCcHHHHHHHHHH--HHHHhhC---cHHHHHHHHHHHHHHHHhhcccc
Q psy15447        290 L--GSVGGFCVGSSYIIEHHRLSGSGY-CFSASLPPFLAVAANKA--LHLLKAN---PSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       290 l--g~~gG~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~--l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      =  |.+.|.++++++++..+.+...-. ...+.+-|..++-.+..  |..+.++   +-.+++.+.....+++.|-+   
T Consensus       251 GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~---  327 (417)
T COG3977         251 GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPE---  327 (417)
T ss_pred             CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCc---
Confidence            2  344599999999999886543221 12223344333434333  2222221   22345556666666666665   


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----ccCCCCCeEEEEecCCCCHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----EAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----~~~~~~~~lRi~~~~~~t~edi  437 (457)
                       ..+.+..+.+.-+.|+.+++-.      .....+.++|.++|+++.|+.++-+    +++-...++|++..  -+++.|
T Consensus       328 -~~~~iHkpEGAIFlWLWf~dLP------Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~--~~~~~i  398 (417)
T COG3977         328 -YRCLIHKPEGAIFLWLWFKDLP------ITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV--PEPEKI  398 (417)
T ss_pred             -cceeeecCCcceeehhhhccCC------CCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC--CCHHHH
Confidence             4555654444444566665432      1567899999999999999887544    23333678999875  489999


Q ss_pred             HHHHHHHHHHHHHhcCC
Q psy15447        438 NSLIETLCKSHDIAVQP  454 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~~~  454 (457)
                      ++.+.+|.+..+.+.+.
T Consensus       399 e~Gva~lae~ve~~yq~  415 (417)
T COG3977         399 EKGVAILAEEVERAYQE  415 (417)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999888877654

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.67  E-value=7.6e-14  Score=135.59  Aligned_cols=288  Identities=11%  Similarity=0.075  Sum_probs=185.7

Q ss_pred             hHHHHHHHHHHHhhcCCC---cE-EEecccHHHHHHHHHhhc-CCCCEEEEeCcccHHH-H-HHHHhcCC-eEEEe--cC
Q psy15447        124 NVVHLDLENDIASFMGLE---ET-ALYSFGFSTSASAIAAYV-KRNDAVFVDENINFAI-Q-TGLIASRC-KVQYF--KH  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~~-i~~~sG~~a~~~ai~a~~-~~gd~v~~~~~~h~~~-~-~~~~~~g~-~~~~~--~~  193 (457)
                      .+...+..+.|.++++.+   .+ ++..||+.+.++++..+. ++|+.+++.. .++.- . ..++..|. ++..+  +.
T Consensus        38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~  116 (374)
T TIGR01365        38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEY  116 (374)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCC
Confidence            567778889999999853   24 445789999999999988 5887777765 44443 3 44555666 34433  32


Q ss_pred             ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                         .|+++++.   +          ..   |.+.+.-..+|...|++++...+  +++++|+|.+.++|..         
T Consensus       117 g~~~~~~~ve~---~----------~~---v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~---------  169 (374)
T TIGR01365       117 GKLPDLKKVDF---K----------ND---VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ---------  169 (374)
T ss_pred             CCCCCHHHcCC---C----------CC---EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC---------
Confidence               25666651   1          11   33444445689999987555322  5899999999887643         


Q ss_pred             ccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCC-----c--------------ce-ecC-CCcHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGS-----G--------------YC-FSA-SLPPFLAVA  327 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~-----~--------------~~-~~~-~~~~~~~aa  327 (457)
                        .++.+++|+++.+-.|++|+++  ++++.+++.++.......     .              .. .+. +++.....+
T Consensus       170 --~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a  247 (374)
T TIGR01365       170 --DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVED  247 (374)
T ss_pred             --CCChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHH
Confidence              2233468999999999998655  467888877766442110     0              00 111 123333444


Q ss_pred             HHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCC-eEEecc---CCCCe-EEEEecCCcc----hHHHHHHHHH
Q psy15447        328 ANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGH---RDTPL-KYLYLQKSDD----EVASKKLLQT  395 (457)
Q Consensus       328 a~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~---~~~~~-~~i~~~~~~~----~~~~~~~~~~  395 (457)
                      +..+++.++++   +.+.++.+++++.+++.+++    .| +.+...   ..++. ..+.+..+..    .........+
T Consensus       248 ~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~----lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~  323 (374)
T TIGR01365       248 WLDALKWAESIGGLKPLIARADDNLAVLEAFVAK----NNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKE  323 (374)
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHH
Confidence            55666655442   56788999999999999999    55 555432   23443 3344433210    0000101467


Q ss_pred             HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.+.|.++||.+.++.+.     ..+..+||..-..++++|++.++++|+=+.++
T Consensus       324 ~~~~l~~~gi~i~~G~~~-----~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~  373 (374)
T TIGR01365       324 LISTLEKEGVAYDIGSYR-----DAPSGLRIWCGATVEKSDLECLCPWLDWAFAL  373 (374)
T ss_pred             HHHHHHHCCEEEeccccc-----cCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence            899999999988876642     22478999998889999999999999876654

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.66  E-value=7.6e-14  Score=138.82  Aligned_cols=291  Identities=15%  Similarity=0.159  Sum_probs=187.0

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-Cc--EEEecccHHHHHHHHHhhcC-----C----
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EE--TALYSFGFSTSASAIAAYVK-----R----  163 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~--~i~~~sG~~a~~~ai~a~~~-----~----  163 (457)
                      ++...+++...+.+....   ...+.++.....++-..++++++. +.  ..++++|++||..++.+...     .    
T Consensus        75 ~~~a~~~~~~~~~~nl~d---~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~  151 (460)
T COG0076          75 PPVAAELLVSALNKNLGD---PDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES  151 (460)
T ss_pred             HHHHHHHHHHHHhhcCCC---cccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence            455666666666552111   111224555566666667777775 33  47889999999988765321     1    


Q ss_pred             -----CCEEEEeCcccHHHHHHHHhcCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        164 -----NDAVFVDENINFAIQTGLIASRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       164 -----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                           ...|+++..+|.+..+++.+.|.....++      ..|++++++.+.+...       ..  +|+....+.++|.
T Consensus       152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~-------~g--~vV~~aGtT~~G~  222 (460)
T COG0076         152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTI-------GG--VVVGTAGTTDTGS  222 (460)
T ss_pred             cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhcc-------Cc--eEEEEecCCCCCc
Confidence                 11689999999999999999986654433      2389999999987552       11  4666666678999


Q ss_pred             CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc-ccCCCCCCccEEEecCcccccC--cccEE-EecH-HHHHHH
Q psy15447        233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE-YFGVSTEEVDMIIGSLEHALGS--VGGFC-VGSS-YIIEHH  307 (457)
Q Consensus       233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~-~~~~~~~~~Di~~~s~sK~lg~--~gG~v-~~~~-~~~~~~  307 (457)
                      +.|+++|.++|++||+++++|.|++...+.-. ..... .+++  +.+|.++.++||.+..  ..|++ +-++ .+.+.+
T Consensus       223 iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~-~~~~~~~f~l--~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~  299 (460)
T COG0076         223 IDDIEELADIAEEYGIWLHVDAAFGGFLLPFL-EPDGRWDFGL--EGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRIL  299 (460)
T ss_pred             cCCHHHHHHHHHHcCCcEEEEccccceeeccc-CccchhhcCC--CCceEEEECcccccCCCCCceEEEEECHHHhhhhh
Confidence            99999999999999999999999876544211 11111 2344  5779999999999852  23555 4444 344443


Q ss_pred             HhhC---C-----cceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        308 RLSG---S-----GYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       308 ~~~~---~-----~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      ....   .     .++..++-+.-..++..++++.+..+  .++.++..++++++.+.|++   ...+++..++..+++.
T Consensus       300 ~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~---~~~~e~~~~p~l~~V~  376 (460)
T COG0076         300 IFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEK---LGDFELVNEPELPIVA  376 (460)
T ss_pred             hcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHh---CCCcEeecCCccceEE
Confidence            3111   1     11111222333445555667666322  45677777999999999999   4458988888899999


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEecc
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCP  410 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~  410 (457)
                      +++++..+      ...+..+++.+.|-.+...
T Consensus       377 fr~~~~~~------~~~~~~~~~~~~gw~v~~~  403 (460)
T COG0076         377 FRLKDDED------TLADLSERLDRRGWQVPAQ  403 (460)
T ss_pred             EEcCCccc------chhchHHHHHhcCceeecc
Confidence            98855320      1234455565667665543

>PLN02452 phosphoserine transaminase

Probab=99.64  E-value=2e-13  Score=132.59  Aligned_cols=321  Identities=13%  Similarity=0.076  Sum_probs=203.5

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCC---CC--CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGV---GS--CGPRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFS  151 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~---~~--~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~  151 (457)
                      +.++|+.+ +..+  +++|.+++.+.+-.|.-   +.  .+.|... -.+...+.++.|.++++.+   +++++ .||+.
T Consensus         7 ~~~~f~pG-P~~l--p~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~-f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~   82 (365)
T PLN02452          7 RVFNFSAG-PATL--PANVLAKAQAELYNWEGSGMSVMEMSHRGKE-FLSIIQKAEADLRELLDIPDNYEVLFLQGGAST   82 (365)
T ss_pred             ceEeeeCC-CCCC--CHHHHHHHHHHHhcccccCccccccCCCchH-HHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence            35566542 2222  58899988887765431   10  1112111 1467788899999999864   35555 57778


Q ss_pred             HHHHHHHhhcCCCCEE-EEeCcccHHHH-HHHHhcCCeEEEe--cCCC---HHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        152 TSASAIAAYVKRNDAV-FVDENINFAIQ-TGLIASRCKVQYF--KHNN---MQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v-~~~~~~h~~~~-~~~~~~g~~~~~~--~~~d---~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      +.++++..+..+|+.+ ++..+.++.-+ +-++..|......  +..+   +-++++ ++.         .+....|.+.
T Consensus        83 ~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~v~~~  152 (365)
T PLN02452         83 QFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSE-WEL---------TPDAKFVHIC  152 (365)
T ss_pred             HHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHH-cCC---------CCCCcEEEEC
Confidence            8999988888887754 44555554422 2333334322222  1111   222222 221         1245667776


Q ss_pred             cCCCCCCCC-CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447        225 GVYMNSADI-CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY  302 (457)
Q Consensus       225 ~v~~~~G~i-~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~  302 (457)
                      +....+|.. .|++++.      ++++|+|.++++|...         .++  ++.++...|..|++|++| |+++.+++
T Consensus       153 hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~p---------idv--~~~~v~~~saqK~lGP~Gl~~v~vr~~  215 (365)
T PLN02452        153 ANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKP---------VDV--SKYGVIYAGAQKNVGPSGVTIVIIRKD  215 (365)
T ss_pred             CCCCCCcEecCcccccC------CCeEEEECCccccCcc---------cCH--HHcCEEEEecccccCCCCeEEEEEcHH
Confidence            666678884 7787764      2899999999876421         222  333445569999999877 88899998


Q ss_pred             HHHHHHhhCCcc-----------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        303 IIEHHRLSGSGY-----------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       303 ~~~~~~~~~~~~-----------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      +++........+           .+ .++|.....+..++++.+++.   +.+.++.+++++++++.|++   .+|+...
T Consensus       216 ~l~~~~~~~~~~~~~~~~~~~~s~~-~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~---~~G~y~~  291 (365)
T PLN02452        216 LIGNARPITPGMLDYKIHAENDSLY-NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE---SNGFYVC  291 (365)
T ss_pred             HHhhcccCCCchhhHHHHHhcCCcc-CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh---CCCcccC
Confidence            887653221111           11 234556667777889888653   46778899999999999988   3455111


Q ss_pred             -cc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        369 -GH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       369 -~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                       .+   ....++.+.+++..       ...+|.+.+.++|+...++..      .. +.+|+++-..++.++++++++.+
T Consensus       292 ~~~~~~rs~~~vsF~~~~~~-------~~~~f~~~~~~~g~~~~~G~r------~~-gg~R~s~yna~~~~~v~~L~~~m  357 (365)
T PLN02452        292 PVEKSVRSLMNVPFTLGGSE-------LEAEFVKEAAKAGMVQLKGHR------SV-GGMRASIYNAMPLAGVEKLVAFM  357 (365)
T ss_pred             CCChHHhCCeEEEEEcCCch-------hHHHHHHHHHHCCCcccCCcc------cc-CceEEECcCCCCHHHHHHHHHHH
Confidence             11   12346667766543       567899999999998876653      22 23999999999999999999999


Q ss_pred             HHHHHH
Q psy15447        445 CKSHDI  450 (457)
Q Consensus       445 ~~~~~~  450 (457)
                      ++..+.
T Consensus       358 ~~f~~~  363 (365)
T PLN02452        358 KDFQAK  363 (365)
T ss_pred             HHHHHh
Confidence            987654

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.64  E-value=1.1e-13  Score=148.44  Aligned_cols=280  Identities=12%  Similarity=0.081  Sum_probs=187.1

Q ss_pred             CCcccChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHHHHhh-cCC--CCEEEEeCcccHHHHHHH----HhcCCeE
Q psy15447        118 RGFYGTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASAIAAY-VKR--NDAVFVDENINFAIQTGL----IASRCKV  188 (457)
Q Consensus       118 ~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~ai~a~-~~~--gd~v~~~~~~h~~~~~~~----~~~g~~~  188 (457)
                      -..+|..+...++++.+++++|.+.  +-++.+++.+.+.++.++ .++  ++.|++++..|+++...+    +..|.++
T Consensus       114 EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev  193 (954)
T PRK05367        114 EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEV  193 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEE
Confidence            3456788888999999999999874  467777777666555554 233  489999999999977553    4568888


Q ss_pred             EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447        189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV  268 (457)
Q Consensus       189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~  268 (457)
                      +.++..+  +++      .        +.+..+++.. -+.+|.+.|+++|.++||++|+++++|..+.......     
T Consensus       194 ~~~~~~~--d~~------~--------~~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~-----  251 (954)
T PRK05367        194 VVGDAAK--ALD------H--------DDVFGVLLQY-PGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLT-----  251 (954)
T ss_pred             EEecCcc--CCC------c--------ccEEEEEEec-CCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCC-----
Confidence            8887643  111      1        2344444443 4578999999999999999999999998652221221     


Q ss_pred             ccccCCCCCCccEEEecCccc-----ccCcc-cEEEecHHHHHHHHhhC----------Cccee------------cCCC
Q psy15447        269 TEYFGVSTEEVDMIIGSLEHA-----LGSVG-GFCVGSSYIIEHHRLSG----------SGYCF------------SASL  320 (457)
Q Consensus       269 ~~~~~~~~~~~Di~~~s~sK~-----lg~~g-G~v~~~~~~~~~~~~~~----------~~~~~------------~~~~  320 (457)
                          .....++||++++.+|+     +|+++ ||++.++++.+.+....          ..+.+            .++.
T Consensus       252 ----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTs  327 (954)
T PRK05367        252 ----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATS  327 (954)
T ss_pred             ----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCccccccccccccccccccccc
Confidence                01123569999999998     55554 88999988777663110          11111            0111


Q ss_pred             cHH---HHHHHHHHH--HHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447        321 PPF---LAVAANKAL--HLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL  393 (457)
Q Consensus       321 ~~~---~~aaa~a~l--~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  393 (457)
                      |..   +..++.+++  .++...  .+..+++..++.++.+.|++    .|+++..+.....+.+.++  .       ..
T Consensus       328 Nict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~----~G~~~~~~~~f~~~~~~~~--~-------~~  394 (954)
T PRK05367        328 NICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA----LGLEVVHDSFFDTLTVEVG--G-------DA  394 (954)
T ss_pred             ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----cCcccCCCCCCCeEEEeCC--C-------CH
Confidence            222   122222221  223221  35677888899999999977    6777653333344444443  2       35


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .++.++|.++||.++...         .+.+|++++..+|++||++++++|.
T Consensus       395 ~~i~~~l~~~gi~~~~~~---------~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        395 AAVLARALAAGINLRRVD---------DDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             HHHHHHHHHCCceecccc---------CCEEEEEecccCCHHHHHHHHHHHc
Confidence            689999999999885432         4689999999999999999999996

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.64  E-value=1.2e-13  Score=133.28  Aligned_cols=345  Identities=14%  Similarity=0.102  Sum_probs=205.0

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      --+||+-|-...+. ..++..+|+..     |-      -.|+-.+...+|++..++++|.+.++++.+|..+...+++.
T Consensus        41 dV~IDLrSDTgT~a-pS~~m~aAM~~-----GD------D~Y~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~  108 (467)
T TIGR02617        41 DVFIDLLTDSGTGA-VTQSMQAAMMR-----GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPV  108 (467)
T ss_pred             CeEEECccCCCCCC-CCHHHHHHHHc-----CC------cccccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHh
Confidence            45789987654332 25667766664     21      12334555689999999999999999999999999999999


Q ss_pred             hcC-CCCEEEEeC-------cccHHH-HHHHHhcCCeEEEe--------------c-CCCHHHHHHHHHhhchhcccCCC
Q psy15447        160 YVK-RNDAVFVDE-------NINFAI-QTGLIASRCKVQYF--------------K-HNNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       160 ~~~-~gd~v~~~~-------~~h~~~-~~~~~~~g~~~~~~--------------~-~~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      +++ +|+.+.++.       .+|..+ .....++|+....+              + ..|++.+++.|++...       
T Consensus       109 ~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-------  181 (467)
T TIGR02617       109 LIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-------  181 (467)
T ss_pred             hcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-------
Confidence            988 677666433       234443 34566777664432              1 2289999999986432       


Q ss_pred             CccEEEEEecCCCC-CCCCCC---hHHHHHHHHHcCcEEEEEcCcccc-cc-------cCCCCcccccc-CCCCCCccEE
Q psy15447        216 VTKKFIIVEGVYMN-SADICP---LKDILSLRSKYQARIFVDESVSFG-TL-------GSTGHGVTEYF-GVSTEEVDMI  282 (457)
Q Consensus       216 ~~~~~vi~e~v~~~-~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g-~~-------g~~g~~~~~~~-~~~~~~~Di~  282 (457)
                      +++.++.++-.+|. +|...|   +++++++|++||+.+++|.+.-+- .+       +..+....+.. .+ -+.+|.+
T Consensus       182 ~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~-~~~aDsv  260 (467)
T TIGR02617       182 NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET-YKYADML  260 (467)
T ss_pred             CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh-hccCCEE
Confidence            23344444433343 566777   679999999999999999875321 11       22222221110 00 1345888


Q ss_pred             EecCcccccCc-ccEEEecHH----HHHHHHhhCC---cc-eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        283 IGSLEHALGSV-GGFCVGSSY----IIEHHRLSGS---GY-CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       283 ~~s~sK~lg~~-gG~v~~~~~----~~~~~~~~~~---~~-~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      ..|++|.+|.+ ||+++++++    +.+..+....   ++ +|+ +++.--..+....|+..- +++....--+..+||.
T Consensus       261 t~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYG-Glagrd~ea~a~Gl~e~~-~~~yl~~ri~qv~yl~  338 (467)
T TIGR02617       261 AMSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYG-GLEGGAMERLAVGLYDGM-NLDWLAYRINQVQYLV  338 (467)
T ss_pred             EEEcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCcCcC-chhHHHHHHHHhhhhhcc-cHHHHHHHHHHHHHHH
Confidence            99999999865 899988865    2233332211   22 232 222222222212232221 1234444445678999


Q ss_pred             HHhhcccccCCeEEeccCCCCeEEEEecCCcc-hHHHHHHHHHHHHHHH-HcCeeEeccc------cCcc-ccC-CCCCe
Q psy15447        354 SLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-EVASKKLLQTICDMCI-QAGFAITCPS------HLDQ-EAK-KQKPS  423 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~-~~~-~~~~~  423 (457)
                      +.|.+    .|++++. .+++-+.+....-.. .+..+.-++.++.+|- +.||-..-.+      .|.. +.. ..-+.
T Consensus       339 ~~L~~----~Gvpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el  413 (467)
T TIGR02617       339 NGLEE----IGVVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAEL  413 (467)
T ss_pred             HHHHh----CCCcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccce
Confidence            99998    8998886 777777664322100 0111124556666664 4466532211      1211 111 11367


Q ss_pred             EEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        424 IRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       424 lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +|+++| -..|.+++|.+++++..+.+..
T Consensus       414 ~RlaipRrvyt~~h~d~v~~~~~~~~~~~  442 (467)
T TIGR02617       414 LRLTIPRATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_pred             eeeccccccccHhHHHHHHHHHHHHHhhh
Confidence            999875 4569999999999999887654

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.62  E-value=1.3e-13  Score=136.29  Aligned_cols=287  Identities=16%  Similarity=0.170  Sum_probs=180.8

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------  193 (457)
                      .....+.++..|+.+|.++..|..+|+ .||..++.+++++||.|++++.+|-+...++-++|+..++...         
T Consensus        69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~  148 (557)
T COG1982          69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGII  148 (557)
T ss_pred             CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccccc
Confidence            445788899999999999998888777 6899999999999999999999999999999999988766532         


Q ss_pred             --CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc
Q psy15447        194 --NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY  271 (457)
Q Consensus       194 --~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~  271 (457)
                        -+.+.+++.+.++..       ..+.+|++.|-+  .|.+..+++|+++++++++|+.+||+|+.-. +.++.. .+ 
T Consensus       149 ggI~~~~~~~~l~~~~~-------~~k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~~~-~~~~~l-~~-  216 (557)
T COG1982         149 GGIPLETFKEALLAHPD-------AEKLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPAHF-DFSPML-PE-  216 (557)
T ss_pred             CCCCHHHHHHHHHhChh-------hheeEEEecCcc--ceEeecHHHHHHHHhhcCceEEhhhcCcccc-cccccC-cc-
Confidence              267888888776542       114566666544  5899999999999999999999999987432 221111 11 


Q ss_pred             cCCCCCCccEEEecCcccccCc--ccEEEec-------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cH
Q psy15447        272 FGVSTEEVDMIIGSLEHALGSV--GGFCVGS-------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PS  340 (457)
Q Consensus       272 ~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~  340 (457)
                      ... ....|+++.|.||.+++.  +.++-.+       +.+.+.+.      .++++.|.+...|.+.+-+.+...  .+
T Consensus       217 ~~~-~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~------~h~STSPsY~l~ASlD~Ar~~~~~~G~~  289 (557)
T COG1982         217 SAL-NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM------MHQSTSPSYPLMASLDVARMQEGNAGRE  289 (557)
T ss_pred             hhh-hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH------HHccCCchHHHHHHHHHHHHhhhhhhHH
Confidence            111 145689999999999632  2333222       23333332      222233444444444433333322  22


Q ss_pred             H----HHHHHHHHHHHHHHhhcccccCCeEEeccCC--------------------CCeEE-EEecCCcchHHHHHHHHH
Q psy15447        341 L----LTKLREKCNTMHSLLSQHKVTQRFLVQGHRD--------------------TPLKY-LYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       341 ~----~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~--------------------~~~~~-i~~~~~~~~~~~~~~~~~  395 (457)
                      +    .+..-+.++.+++...+   +.++.++.+..                    -|+-. +..+ .     .+..+..
T Consensus       290 l~~~~~~~~i~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp-~-----~Gipg~~  360 (557)
T COG1982         290 LWQEVIDEAIDFRKALRRLINE---IGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP-E-----FGIPGAI  360 (557)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh---cCCeeeccccccCCcccccccccccccceeccccEEEEecC-C-----CCCcHHH
Confidence            2    33444555566665555   34566554432                    01111 1111 1     1125668


Q ss_pred             HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      +.++|+++|+.......       ....+-|++....+..+++.+++..+
T Consensus       361 v~~~L~e~gii~e~~~d-------~~~lll~~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         361 VAKYLREHGIIPEETGD-------YSNLLLFSPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             HHHHHHHcCCeeeecCC-------ceeeEEeeeccchHHHHHHHHHHHHH
Confidence            89999999987654321       12334444443556677777777766

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.59  E-value=3.7e-13  Score=131.57  Aligned_cols=245  Identities=18%  Similarity=0.204  Sum_probs=156.0

Q ss_pred             hHHHHHHHHHHHhhcCCC---------cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHH
Q psy15447        124 NVVHLDLENDIASFMGLE---------ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTG  180 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---------~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~  180 (457)
                      .+...++-+.+++++|.+         ..+++++|+++|..++.+..+              +.-.|++++..|.+..++
T Consensus        78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka  157 (373)
T PF00282_consen   78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA  157 (373)
T ss_dssp             HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred             ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence            344455556667777755         358889999999988755421              123677888899999999


Q ss_pred             HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcC
Q psy15447        181 LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       181 ~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa  255 (457)
                      +.+.|..++.++.+     |+++|++.|++..+.     +..+.+|+..-....+|.+.|+++|+++|++|++||++|.+
T Consensus       158 a~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~-----g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA  232 (373)
T PF00282_consen  158 ARILGLGVRKIPTDEDGRMDIEALEKALEKDIAN-----GKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAA  232 (373)
T ss_dssp             HHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHT-----TEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEET
T ss_pred             cceeeeEEEEecCCcchhhhHHHhhhhhcccccc-----cccceeeeccCCCcccccccCHHHHhhhccccceeeeeccc
Confidence            99999888877644     789999999875531     12233566666666799999999999999999999999999


Q ss_pred             ccccc-ccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEec-HHHHHHHHhhCCcce----------------
Q psy15447        256 VSFGT-LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGS-SYIIEHHRLSGSGYC----------------  315 (457)
Q Consensus       256 ~~~g~-~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~-~~~~~~~~~~~~~~~----------------  315 (457)
                      ++... +.+..+.  -..++  +.+|-+..+.||.++.+  .|+++.+ +............|.                
T Consensus       233 ~gg~~~~~~~~~~--~~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~  308 (373)
T PF00282_consen  233 YGGSALLSPEYRH--LLFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY  308 (373)
T ss_dssp             TGGGGGGHCTTGG--GGTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred             ccccccccccccc--ccccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence            87532 2222221  12344  56799999999999743  3555554 333322110000111                


Q ss_pred             -ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        316 -FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       316 -~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                       ...+ -...+...-.+++.+..+  .++.++..+++++|.+.|++   .+++++..++..+++.++++
T Consensus       309 tl~~S-R~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~---~~~~el~~~~~~~~vcFr~k  373 (373)
T PF00282_consen  309 TLQGS-RRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRK---DPRFELVNEPDLNIVCFRYK  373 (373)
T ss_dssp             SSSSS-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEEESSTTSSSEEEEEES
T ss_pred             ccccc-ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCEEEEcCCCceEEEEEeC
Confidence             1111 122222222334433322  35677788899999999998   57799987788888888753

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.57  E-value=9.4e-13  Score=124.03  Aligned_cols=306  Identities=11%  Similarity=0.112  Sum_probs=196.6

Q ss_pred             cccChHHHHHHHHHHHhhcCCCcEEE-ecccHH---HHHHHHHhhcC-----CCCEEEEeCcccHHHHHHHHhcCCeEEE
Q psy15447        120 FYGTNVVHLDLENDIASFMGLEETAL-YSFGFS---TSASAIAAYVK-----RNDAVFVDENINFAIQTGLIASRCKVQY  190 (457)
Q Consensus       120 ~~g~~~~~~~l~~~la~~~g~~~~i~-~~sG~~---a~~~ai~a~~~-----~gd~v~~~~~~h~~~~~~~~~~g~~~~~  190 (457)
                      ..|..+...+|++.|.++.|.+.+-+ -++|++   +-..+|+++..     ..+++++++..|+.....+.+.|.+++.
T Consensus       104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~  183 (496)
T COG1003         104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV  183 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEE
Confidence            45677888999999999999997754 456664   45566777632     3468999999999999999999999999


Q ss_pred             ecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-ChHHHHHHHHHcCcEEEEEcCcccccccCC
Q psy15447        191 FKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-PLKDILSLRSKYQARIFVDESVSFGTLGST  264 (457)
Q Consensus       191 ~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-~l~~i~~l~~~~g~~li~DEa~~~g~~g~~  264 (457)
                      ++.+     |+++|++++.+           +++++++..++ .-|... .+.+|+++.+++|..|.+|.+.--..+|..
T Consensus       184 V~~~~~G~VDlddLk~k~~~-----------~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~  251 (496)
T COG1003         184 VKCDENGNVDLDDLRAKAED-----------NLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLA  251 (496)
T ss_pred             EecCCCCCccHHHHHHHhcc-----------ceeEEEeccCc-ccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccc
Confidence            8865     79999988863           45666665544 335553 489999999999999999998654445532


Q ss_pred             CCccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHh----hC-Ccceec--------CCCcHHH
Q psy15447        265 GHGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRL----SG-SGYCFS--------ASLPPFL  324 (457)
Q Consensus       265 g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~----~~-~~~~~~--------~~~~~~~  324 (457)
                      ..|   .+     +.|++-..+||+|+.      +| |-|..++.++.++..    .. ..|...        -+..++.
T Consensus       252 rPG---d~-----G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G  323 (496)
T COG1003         252 RPG---DM-----GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG  323 (496)
T ss_pred             ccc---cc-----ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence            222   12     448888899999942      22 456666666665532    01 111100        0011111


Q ss_pred             HHH-HHHHHHH---HhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHH
Q psy15447        325 AVA-ANKALHL---LKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTIC  397 (457)
Q Consensus       325 ~aa-a~a~l~~---~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~  397 (457)
                      .+. ...+..+   +..+  .+.-+..--|++|+.++|+.     .+++.-.+..+...-.+-+.... +.......+++
T Consensus       324 s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-----~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA  398 (496)
T COG1003         324 SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG-----YYPVPYTGENRVAHECILDARPLKKETGVRALDVA  398 (496)
T ss_pred             cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-----cCccccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence            111 1122222   2221  12234444578999999986     23332222222221111111100 11122567899


Q ss_pred             HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        398 DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       398 ~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      ++|++.|+......+|    ....+.+.|-|+-+-|++++|++++++.++.+++...
T Consensus       399 KrLlD~GfHaPT~~FP----liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~  451 (496)
T COG1003         399 KRLLDYGFHAPTMYFP----LIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV  451 (496)
T ss_pred             HHHHhcCCCCCcccCc----cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999987766654    1246889999999999999999999999998887643

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.49  E-value=3.3e-11  Score=115.98  Aligned_cols=307  Identities=11%  Similarity=0.051  Sum_probs=193.5

Q ss_pred             ChhhHHHHHHHHHhcCC---CC--CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEec-ccHHHHHHHHHhhcCCCC-
Q psy15447         96 NPDIEKCAIDCIDKNGV---GS--CGPRGFYGTNVVHLDLENDIASFMGLE---ETALYS-FGFSTSASAIAAYVKRND-  165 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~---~~--~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~-sG~~a~~~ai~a~~~~gd-  165 (457)
                      +++|.+++++.+..|..   +.  .+.|.. --.+...+.++.|.++++.+   ++++++ +|+.+.+++...+.++|| 
T Consensus        16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~-~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~   94 (364)
T PRK12462         16 PDTVLEQVRQAVVELPETGLSVLGMSHRSS-WFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA   94 (364)
T ss_pred             CHHHHHHHHHHHhcccccCccccccccccH-HHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc
Confidence            46888888887776532   11  111111 01567788889999999863   455555 567788888888888888 


Q ss_pred             EE-EEeCcccHHHH-HHHHhcC-CeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        166 AV-FVDENINFAIQ-TGLIASR-CKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       166 ~v-~~~~~~h~~~~-~~~~~~g-~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      .+ .+..+.++.-+ .-++..| .++....       ..+++.+    +. .        +....|.+.+....+|...|
T Consensus        95 ~~~~~~tG~fg~r~~~ea~~~g~v~~~~~~~~~~~~~~p~~~~~----~~-~--------~d~~~v~~t~NETstGv~~~  161 (364)
T PRK12462         95 APEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPSLAEL----DW-D--------ARAPFRHYVSNETVEGLQFP  161 (364)
T ss_pred             EEEEEeCCHHHHHHHHHHHhcCCceEecCcCCCCCCcCCCHHHh----cc-C--------CCCcEEEEccCCCCceEecC
Confidence            44 45565554433 2222323 2222211       1123332    11 1        23456666666666788876


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc-
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG-  313 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~-  313 (457)
                           ++.+.++.++|+|-+.++|..           .++.++.|++..+..|++|++| ++++.+++.++........ 
T Consensus       162 -----~~~~~~~~llvvD~sS~~~s~-----------pid~~~~dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p~~  225 (364)
T PRK12462        162 -----DAAGLPDSPLIADMSSDFMSR-----------PFDVEAYGMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLPPM  225 (364)
T ss_pred             -----cccccCCCeEEEEcCchhhCC-----------CCChHHccEEEeeccccCCCCceEEEEECHHHHhhccccCCch
Confidence                 333447999999998776421           1223455899999999999766 6678888887665321111 


Q ss_pred             ----------ceecCCCcHHHHHHHHHHHHHHhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEe---ccCCC-Ce
Q psy15447        314 ----------YCFSASLPPFLAVAANKALHLLKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ---GHRDT-PL  375 (457)
Q Consensus       314 ----------~~~~~~~~~~~~aaa~a~l~~~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~---~~~~~-~~  375 (457)
                                ..+. ++|.....+...+++.+.++    +.+.++.+++++.+++.+++   ..++...   ....+ ..
T Consensus       226 ldy~~~~~~~s~~n-TPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~---~~~~~~~~~~~~~RS~mn  301 (364)
T PRK12462        226 LDFRTHVEHRSNYN-TPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDA---LNEVIDCHAHRAARSTMN  301 (364)
T ss_pred             hhHHHHHhcCCCCC-CchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh---CCCcccCCCChhhcCcce
Confidence                      1121 34555666667788887543    46778888999999999988   3333221   11223 34


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.+.+.++.       ...+|.+.+.++|+.-..+..       .-+.+|+++-..++.|+++++++.++++-++
T Consensus       302 v~f~~~~~~-------l~~~f~~~a~~~gl~~lkGhr-------~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        302 VAFRFRQPR-------LDTLFKEQSTEAGFCGLSGHR-------SIGGIRASLYNAVSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             EEEEcCCHH-------HHHHHHHHHHHCCCccccCCc-------ccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            555666543       567899999999987654431       1356999999999999999999999987653

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.46  E-value=2.4e-11  Score=128.52  Aligned_cols=313  Identities=10%  Similarity=0.138  Sum_probs=194.3

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHH---HHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDC---IDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASA  156 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~---l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~a  156 (457)
                      +..|.+.+|.++--+|.|.+.+.+-   ...|  .+.-+-..+|..+...+++..+++++|.+.  +-++..++.+.+++
T Consensus        65 ~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay--tPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~  142 (939)
T TIGR00461        65 FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY--TPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAM  142 (939)
T ss_pred             ccccCCCCcCCCcCChHHHHHHHhCchhhhcC--CCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHH
Confidence            4456555555544345555444321   1122  333333457888889999999999999884  46777777666655


Q ss_pred             HHhhc---CCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        157 IAAYV---KRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       157 i~a~~---~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      +.+..   ++++.|++++..|+.+...+    ...|.+++.+   |+++|++.+             .++.+++..++ .
T Consensus       143 ~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~---~~~~l~~~~-------------~~~~v~~q~Pn-~  205 (939)
T TIGR00461       143 ALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV---DCSDIKKAV-------------DVFGCLLQYPA-T  205 (939)
T ss_pred             HHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE---cHHHHhhcC-------------CEEEEEEECCC-C
Confidence            54532   33478999999999877544    3667777776   445544333             23556565444 5


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC------c-ccEEEecH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS------V-GGFCVGSS  301 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~-gG~v~~~~  301 (457)
                      .|.+.++++|.+++|++|++++++.-. +.+.+-+.|     .+     ++||+++ .+|.||.      + +|+++.++
T Consensus       206 ~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg-----e~-----GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~  274 (939)
T TIGR00461       206 DGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPG-----HY-----GADIVLG-SSQRFGVPMGYGGPHAAFFAVKD  274 (939)
T ss_pred             CeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHH-----Hc-----CCcEEee-CCCccCCCCCCCCCceeeeeecH
Confidence            799999999999999999999996532 332222111     22     4589865 5665542      2 37888888


Q ss_pred             HHHHHHHh----------hCCcceec------------CCCcHHHH---HHHHHH--HHHHhhC--cHHHHHHHHHHHHH
Q psy15447        302 YIIEHHRL----------SGSGYCFS------------ASLPPFLA---VAANKA--LHLLKAN--PSLLTKLREKCNTM  352 (457)
Q Consensus       302 ~~~~~~~~----------~~~~~~~~------------~~~~~~~~---aaa~a~--l~~~~~~--~~~~~~l~~~~~~l  352 (457)
                      ++...+.-          ....+..+            ++.|-...   .+..++  +.++...  .++.++...++.++
T Consensus       275 ~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l  354 (939)
T TIGR00461       275 EYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSIL  354 (939)
T ss_pred             hhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
Confidence            87776521          00112110            11111111   111122  2222211  24556677788899


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      .+.|++    .|+++..++-...+.+.++. .       .+.++.+++.++||.++...         .+.+++++...+
T Consensus       355 ~~~L~~----~G~~~~~~~fF~~~~v~~~~-~-------~~~~i~~~~~~~gi~l~~~~---------~~~i~~s~~E~~  413 (939)
T TIGR00461       355 ANGLEN----DPHELINKTWFDTLTVKVGN-G-------ISSELLKAAEEFNINLRAVD---------TTTVGIALDETT  413 (939)
T ss_pred             HHHHHh----CCCcccCCCccceEEEEeCC-C-------CHHHHHHHHHHCCCeeeecC---------CCEEEEEeecCC
Confidence            999988    78887644223344444432 1       34579999999999976532         468999999999


Q ss_pred             CHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLC  445 (457)
Q Consensus       433 t~edi~~~~~~l~  445 (457)
                      |++||+.+++++.
T Consensus       414 t~~di~~l~~~~~  426 (939)
T TIGR00461       414 TKADVENLLKVFD  426 (939)
T ss_pred             CHHHHHHHHHHhc
Confidence            9999999999994

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.46  E-value=3.5e-10  Score=115.90  Aligned_cols=323  Identities=11%  Similarity=0.114  Sum_probs=190.7

Q ss_pred             cChHHHHHHHHHHHhhcCCCc--EEEecccHHHHHHHHHhhcCCC-----------------------------------
Q psy15447        122 GTNVVHLDLENDIASFMGLEE--TALYSFGFSTSASAIAAYVKRN-----------------------------------  164 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~~--~i~~~sG~~a~~~ai~a~~~~g-----------------------------------  164 (457)
                      .+.....++-+.|++++|.+.  ..++++||.||..++-+.....                                   
T Consensus       120 ~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~  199 (608)
T TIGR03811       120 ATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLE  199 (608)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccc
Confidence            456777778888899888653  5789999999987764432110                                   


Q ss_pred             -----------------------CEEEEeCcccHHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHhhchhcccC
Q psy15447        165 -----------------------DAVFVDENINFAIQTGLIASRC---KVQYFKHN-----NMQHLEELLRQQDERDTLN  213 (457)
Q Consensus       165 -----------------------d~v~~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~  213 (457)
                                             -.++++...|.+..+++.+.|.   .++.++.+     |+++|++.|++..++    
T Consensus       200 ~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~----  275 (608)
T TIGR03811       200 SAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAE----  275 (608)
T ss_pred             ccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhc----
Confidence                                   0477788889999999999986   36665532     799999999765321    


Q ss_pred             CCCccEEEEEecCCCCCCCCCChHHHHHHH---HHcCc--EEEEEcCccccc---c-cCCCCc-----------------
Q psy15447        214 SKVTKKFIIVEGVYMNSADICPLKDILSLR---SKYQA--RIFVDESVSFGT---L-GSTGHG-----------------  267 (457)
Q Consensus       214 ~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~---~~~g~--~li~DEa~~~g~---~-g~~g~~-----------------  267 (457)
                       ...+.+|+..-....+|.+.|+++|.++|   +++|+  ++++|.|++...   + .+.+..                 
T Consensus       276 -g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~  354 (608)
T TIGR03811       276 -KTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFT  354 (608)
T ss_pred             -CCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccc
Confidence             12344566555566789999999999999   67887  699999997532   1 110000                 


Q ss_pred             -----cc-----cccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcce---------------ecCC
Q psy15447        268 -----VT-----EYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYC---------------FSAS  319 (457)
Q Consensus       268 -----~~-----~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~---------------~~~~  319 (457)
                           +.     ...++  ..+|-++..+||.+..   .|++++-++.+.+.+... ..|.               ..++
T Consensus       355 ~~~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~-a~Yl~~~~~~~p~~~g~~~legS  431 (608)
T TIGR03811       355 EKKEYISREVYNAYKAI--SEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYF-ATYVFEKGADIPALLGAYILEGS  431 (608)
T ss_pred             cccccccHhHHHHHhcC--cCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcC-cchhccccccCcccccccceecC
Confidence                 00     11133  4679999999999863   344566666655544321 1221               1122


Q ss_pred             CcHHHHHHHHHHHHHH--h--hCcHHHHHHHHHHHHHHHHhhcccc---cCCeEE--eccCCCCeEEEEecCCcch--HH
Q psy15447        320 LPPFLAVAANKALHLL--K--ANPSLLTKLREKCNTMHSLLSQHKV---TQRFLV--QGHRDTPLKYLYLQKSDDE--VA  388 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~--~--~~~~~~~~l~~~~~~l~~~L~~~~~---~~~~~~--~~~~~~~~~~i~~~~~~~~--~~  388 (457)
                      -+...+++.-.+++.+  .  ...++..+..++++++.+.|++...   .+.+++  ..++..+++.+.+......  +.
T Consensus       432 R~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~  511 (608)
T TIGR03811       432 KAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVK  511 (608)
T ss_pred             CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHH
Confidence            1222233333455555  2  1245777888889999999877311   133454  4456777777776532211  22


Q ss_pred             HHHHHHHHHHHHH-------HcCeeEeccccCcc-------------ccC-----C--CCCeEEEEe--cCCCCHHHHHH
Q psy15447        389 SKKLLQTICDMCI-------QAGFAITCPSHLDQ-------------EAK-----K--QKPSIRITC--NISHTEQDMNS  439 (457)
Q Consensus       389 ~~~~~~~~~~~l~-------~~Gi~v~~~~~~~~-------------~~~-----~--~~~~lRi~~--~~~~t~edi~~  439 (457)
                      ......++.+++.       +.-++++...+...             +..     .  .-..+|-++  |....++.++.
T Consensus       512 ~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~  591 (608)
T TIGR03811       512 MNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDE  591 (608)
T ss_pred             HHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHH
Confidence            2223444555544       11233322111100             000     0  012467665  44455678888


Q ss_pred             HHHHHHHHHHHhc
Q psy15447        440 LIETLCKSHDIAV  452 (457)
Q Consensus       440 ~~~~l~~~~~~~~  452 (457)
                      +.+.|++++.+..
T Consensus       592 ~~~~~~~~~~~~~  604 (608)
T TIGR03811       592 YAPKIKAAMQEKL  604 (608)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888776543

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.41  E-value=3.8e-10  Score=105.80  Aligned_cols=300  Identities=13%  Similarity=0.075  Sum_probs=160.4

Q ss_pred             cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH-HHH-Hh----h-------cCC-CCEEEEeCcccHHHHHHHHhcC
Q psy15447        122 GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA-SAI-AA----Y-------VKR-NDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~-~ai-~a----~-------~~~-gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      |..+-..++++.+|+++|.+  ++++..+.+-.++ -++ .+    .       ++. .-..+.+.+.|-..+.-....|
T Consensus        66 G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~G  145 (425)
T PF12897_consen   66 GGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFG  145 (425)
T ss_dssp             S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT
T ss_pred             CccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhC
Confidence            55566788888999999865  4555554443222 122 11    1       111 1245667777777777777889


Q ss_pred             CeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCCCCCCChHHHHHHH----HHcCcEEEEEcCc
Q psy15447        186 CKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLR----SKYQARIFVDESV  256 (457)
Q Consensus       186 ~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~G~i~~l~~i~~l~----~~~g~~li~DEa~  256 (457)
                      .+.+.+|.    +|++.+|+++++.         +.++-+++-|.+ ||+|.+..-+.+++++    ...++.++-|.+|
T Consensus       146 iemi~VpM~~dGPDmD~Ve~LV~~D---------~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY  216 (425)
T PF12897_consen  146 IEMIPVPMTEDGPDMDMVEELVAED---------PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAY  216 (425)
T ss_dssp             -EEEEEEEETTEE-HHHHHHHTHTS---------TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TT
T ss_pred             cEEEecCCCCCCCCHHHHHHHHhcC---------CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCc
Confidence            88887764    4899999998752         567888888877 5699999877666666    3679999999998


Q ss_pred             ccccc-cCCCCc-------cccccCCCCCCccEEEecCcccc--cCcccEEEecHHHHHHHHhhCCcceecCC-CcHHHH
Q psy15447        257 SFGTL-GSTGHG-------VTEYFGVSTEEVDMIIGSLEHAL--GSVGGFCVGSSYIIEHHRLSGSGYCFSAS-LPPFLA  325 (457)
Q Consensus       257 ~~g~~-g~~g~~-------~~~~~~~~~~~~Di~~~s~sK~l--g~~gG~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  325 (457)
                      .+-.+ +....-       .++..|- |+.+ ++..|.||.-  |++-+|+++++..++.++......+.+.. .|.+--
T Consensus       217 ~vHhL~~~~~~~~~~nil~~~~~AGn-pdrv-~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRH  294 (425)
T PF12897_consen  217 AVHHLYDEEPRDALLNILDACAKAGN-PDRV-YVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRH  294 (425)
T ss_dssp             TT-BSSSSSS------HHHHHHHTT--TTSE-EEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHH
T ss_pred             eEeeccccccchhhhHHHHHHHHcCC-CCeE-EEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHH
Confidence            86555 321111       1122332 4555 8889999965  33337899998888877643321111110 122221


Q ss_pred             HHHHHHHHHHhhCc-HHHHHHHHH-----------HHHHHHHhh-cccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447        326 VAANKALHLLKANP-SLLTKLREK-----------CNTMHSLLS-QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       326 aaa~a~l~~~~~~~-~~~~~l~~~-----------~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      +      ++++..+ .+.+++++-           .+.|.+.|. .   ....+...+.++.++++...+.        .
T Consensus       295 v------rff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~---~~ia~Wt~P~GGYFIsld~~~G--------~  357 (425)
T PF12897_consen  295 V------RFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDG---LGIASWTKPKGGYFISLDVLDG--------T  357 (425)
T ss_dssp             H------HHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTG---GTSEEE---SBSS-EEEEESTT---------
T ss_pred             H------HHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCC---CCeeEecCCCCceEEEEecCCC--------h
Confidence            2      2222211 223333322           233344444 2   1123455566788888887765        6


Q ss_pred             HHHHHHHHHHcCeeEecccc--CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        393 LQTICDMCIQAGFAITCPSH--LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~--~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.++++.+.+.||.+++.+.  |.. ..+.+..|||+|+. -+.+|++.+++.+..+.+.+
T Consensus       358 AkrvV~lakeAGV~LT~AGAtfPyg-~DP~D~nIRiAPS~-P~leel~~Am~~~~~cv~la  416 (425)
T PF12897_consen  358 AKRVVELAKEAGVALTPAGATFPYG-KDPRDSNIRIAPSY-PSLEELETAMDVFATCVKLA  416 (425)
T ss_dssp             HHHHHHHHHHTTEE---TTTTSGGG---TTS-EEEE--SS-S-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCceeCCCCCCCCCC-CCCCCCcEEecCCC-CCHHHHHHHHHHHHHHHHHH
Confidence            78899999999999988553  322 12235689999977 58999999999988777654

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.41  E-value=1.4e-10  Score=109.66  Aligned_cols=324  Identities=11%  Similarity=0.149  Sum_probs=201.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC----CCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV----GSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFST  152 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~----~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a  152 (457)
                      ++.+..|.+.+|.+.-- |.++.  +..+.+.++    .+.-+-..+|..+..-++...+++++|.+  .+=++-.++.+
T Consensus        73 N~~~~sfiG~GyY~~~~-P~vI~--rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa  149 (450)
T COG0403          73 NKVFTSFIGAGYYDTYT-PPVIL--RNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA  149 (450)
T ss_pred             CchhhhhccCcccCCcC-cHHHH--HHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHH
Confidence            45556677777666643 44443  123344332    22223334566777788889999999977  44566677766


Q ss_pred             HHHHHHhhc---CCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        153 SASAIAAYV---KRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       153 ~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      -++++.+..   ++.+.+++++.+|+.+...++    -.|.++...+.+|.++|+.. ..          ..+..++++.
T Consensus       150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~----------~~~~gv~vQy  218 (450)
T COG0403         150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DD----------GDVFGVLVQY  218 (450)
T ss_pred             HHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhc-cc----------cCeEEEEEec
Confidence            665555442   345789999999999887654    33577888888888888877 33          3567888887


Q ss_pred             CCCCCC-CCCChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCcc-----cccCc-ccEE
Q psy15447        226 VYMNSA-DICPLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEH-----ALGSV-GGFC  297 (457)
Q Consensus       226 v~~~~G-~i~~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK-----~lg~~-gG~v  297 (457)
                      +. ..| ...++.+|.+.+|++|+++++=- --+.+.+-+.|     .+     +.||++|+..-     +||++ .||+
T Consensus       219 P~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPG-----e~-----GADIvvG~~QrfGvPmgfGGPhag~f  287 (450)
T COG0403         219 PN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPG-----EF-----GADIVVGSAQRFGVPMGFGGPHAGYF  287 (450)
T ss_pred             CC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcc-----cc-----CCceEEecCcccCCCcCCCCcceeee
Confidence            77 456 66669999999999998877653 44555554433     23     34898887533     22222 2788


Q ss_pred             EecHHHHHHHHh----------hCCccee--------------cCC-C-cHHHHHHHHHHHHH--Hh--hCcHHHHHHHH
Q psy15447        298 VGSSYIIEHHRL----------SGSGYCF--------------SAS-L-PPFLAVAANKALHL--LK--ANPSLLTKLRE  347 (457)
Q Consensus       298 ~~~~~~~~~~~~----------~~~~~~~--------------~~~-~-~~~~~aaa~a~l~~--~~--~~~~~~~~l~~  347 (457)
                      +.++++...+.-          ....|..              +++ . +...+| ..+++-.  +.  ...++.++..+
T Consensus       288 A~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA-~~As~y~~~hGp~GLk~iA~r~~~  366 (450)
T COG0403         288 AVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLA-LAASMYAVYHGPQGLKEIAERIHR  366 (450)
T ss_pred             eEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHH-HHHHHHHHHhChHHHHHHHHHHHH
Confidence            888877655410          0000100              111 1 111111 1122211  11  11346677888


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +..++.++|++..  .|+++....-...+.+.++. .       ....+.++....|+-++...         ...+-++
T Consensus       367 ~a~~la~~L~~~~--~g~~~~~~~fFdt~~v~~~~-~-------~~~~l~~~~~~~G~~L~~~~---------~~~~~ia  427 (450)
T COG0403         367 LAAYLAAGLKEIG--AGVELVFDHFFDTFTVRVPE-E-------VAEALLAAAIAGGINLRRVD---------ADTVLIA  427 (450)
T ss_pred             HHHHHHHHHhhcC--CceEeccccceeeEEEecch-h-------HHHHHHHHHHhcCCceeeec---------CCceEEE
Confidence            8999999999621  45776533222233444432 2       45667777778898887654         3578899


Q ss_pred             ecCCCCHHHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~  447 (457)
                      +.-.+|+++|+.+++++...
T Consensus       428 ~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         428 LTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             eecccCHHHHHHHHHHHhhh
Confidence            99999999999999998764

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.40  E-value=4.5e-11  Score=116.25  Aligned_cols=281  Identities=14%  Similarity=0.219  Sum_probs=153.9

Q ss_pred             CCCcccChHHHHHHHHHHHhhcCCCcE--EEecccHH---HHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCe
Q psy15447        117 PRGFYGTNVVHLDLENDIASFMGLEET--ALYSFGFS---TSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCK  187 (457)
Q Consensus       117 ~~~~~g~~~~~~~l~~~la~~~g~~~~--i~~~sG~~---a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~  187 (457)
                      +-..+|+....-+++..+++++|.+.+  =++..++.   |...+++...++++.|+++...|+.+...++    ..|.+
T Consensus       102 pEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~  181 (429)
T PF02347_consen  102 PEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIE  181 (429)
T ss_dssp             GGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeE
Confidence            334578888899999999999999854  34445553   4444444444445689999999998877544    34677


Q ss_pred             EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc--ccccccCCC
Q psy15447        188 VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV--SFGTLGSTG  265 (457)
Q Consensus       188 ~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~--~~g~~g~~g  265 (457)
                      ++.++..+-....      .        +.+++|+++.++ ..|.+.++++|.+++|++|.++++ .+-  +.+.+-+. 
T Consensus       182 iv~~~~~~~~~~d------~--------~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~P-  244 (429)
T PF02347_consen  182 IVEVPLDEDGTTD------D--------DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSP-  244 (429)
T ss_dssp             EEEE-BBTTCSB-------S--------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--G-
T ss_pred             EEEecccccCCcc------c--------cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCCh-
Confidence            7777643211111      1        567888888777 569999999999999999999988 543  33322221 


Q ss_pred             CccccccCCCCCCccEEEecCcccccCc----c---cEEEecHHHHHHHHh----------hCCccee------------
Q psy15447        266 HGVTEYFGVSTEEVDMIIGSLEHALGSV----G---GFCVGSSYIIEHHRL----------SGSGYCF------------  316 (457)
Q Consensus       266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~~----g---G~v~~~~~~~~~~~~----------~~~~~~~------------  316 (457)
                          ..+|     +||+++. +|.||.+    |   |+++.+++++.++.-          ...+|..            
T Consensus       245 ----ge~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrRe  314 (429)
T PF02347_consen  245 ----GEYG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRRE  314 (429)
T ss_dssp             ----GGGT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGC
T ss_pred             ----hhcC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccccccc
Confidence                1233     4898775 9999631    2   788888887766520          1111111            


Q ss_pred             --cCC--CcHHHHHHHHHH-HHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        317 --SAS--LPPFLAVAANKA-LHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       317 --~~~--~~~~~~aaa~a~-l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                        +.+  .+...+|..... +.++.  ...++.++...++.|+.+.|++   ..++.+....-.-.+....+. .     
T Consensus       315 KAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~---~~~~~~~~~~f~e~v~~~~~~-~-----  385 (429)
T PF02347_consen  315 KATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKK---IYGLPFDNPFFFEFVVVFSKD-K-----  385 (429)
T ss_dssp             CSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---TTBECSSSSSBSSEEEEESS--H-----
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH---hcCcccCCCCceeeeeecCCc-H-----
Confidence              001  123332222111 22222  1245677888899999999998   334433221112222222221 2     


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                        ...++.+++...|+....         ...+.+-+++.-.+|++|||+++++|
T Consensus       386 --~~~~l~~~~~~~gl~~~~---------~~~~~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  386 --EVEELLKRGIEGGLNLRY---------PDDGALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             --HHHHHHHTT----EEEGG---------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred             --HHHHHHHHHHhcCCCccc---------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence              334466666666744422         12458999999999999999999875

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG2467|consensus

Probab=99.40  E-value=1.2e-10  Score=107.36  Aligned_cols=325  Identities=14%  Similarity=0.140  Sum_probs=188.2

Q ss_pred             ChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHH---H-HHHhhcCCCc---E--EEecccHHHHHHHHHhhcCCCC
Q psy15447         96 NPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLE---N-DIASFMGLEE---T--ALYSFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~---~-~la~~~g~~~---~--i~~~sG~~a~~~ai~a~~~~gd  165 (457)
                      +..+.+|+-..+. +|.-++.|.|.+.| ++...++|   + +--+.++.+.   .  +-.-||+-||..+..++++|++
T Consensus        53 s~aVmeAlGS~ltNKYSEGyPG~RYYGG-ne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~  131 (477)
T KOG2467|consen   53 SRAVMEALGSCLTNKYSEGYPGARYYGG-NEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHE  131 (477)
T ss_pred             HHHHHHHHhHHhhcccccCCCcccccCc-chHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCC
Confidence            4667788777664 57777777776544 45555443   2 2223456542   2  3345999999999999999999


Q ss_pred             EEEEeCcccHHH-HHHH-----HhcCCeEE------Eec----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        166 AVFVDENINFAI-QTGL-----IASRCKVQ------YFK----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       166 ~v~~~~~~h~~~-~~~~-----~~~g~~~~------~~~----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      .|+--+.-|+.. -.|.     +++...++      .++    ..|.+.||+.....          +.+++|.-..  .
T Consensus       132 RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f----------rPk~iiaG~S--a  199 (477)
T KOG2467|consen  132 RIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF----------RPKLIIAGTS--A  199 (477)
T ss_pred             eeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc----------CCcEEEeccc--c
Confidence            987643332221 1222     22222221      111    12788888776653          3356655221  1


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHH------
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSY------  302 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~------  302 (457)
                      -....+..++++||++.|++|++|-+|--|..-. |- ...-|    +-.||++.|.+|++ |++||.+.-++-      
T Consensus       200 Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA-~v-ipsPF----ey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~~  273 (477)
T KOG2467|consen  200 YSRLIDYARFRKIADKVGAYLMADMAHISGLVAA-GV-IPSPF----EYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIKP  273 (477)
T ss_pred             chhhccHHHHHHHHHhcCceeehhhhhHHHHHhc-cc-CCCcc----cccceeeccccccccCCcceeEEEeccCCcCCC
Confidence            1234568999999999999999999986554321 11 11112    34589999999999 888888765431      


Q ss_pred             ---------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-
Q psy15447        303 ---------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-  370 (457)
Q Consensus       303 ---------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-  370 (457)
                               +-+.+...-.+. ..++++....++...+|+....  -.+..+++.+|++.|.+.|.+    .|+.++.. 
T Consensus       274 k~g~~i~ydlE~kINfaVFP~-lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~----~Gy~lvtgG  348 (477)
T KOG2467|consen  274 KQGKEILYDLEDKINFAVFPG-LQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS----RGYKLVTGG  348 (477)
T ss_pred             CCCCcceechhhhhhhhcccc-ccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH----cCceEecCC
Confidence                     222222111121 2223333333443344543322  135677888999999999988    88888643 


Q ss_pred             CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC----CHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH----TEQDMNSLIETLCK  446 (457)
Q Consensus       371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~----t~edi~~~~~~l~~  446 (457)
                      .+.+++.+.+....-.   ......+++.   -+|.+....-|.......++.+|+..+.-+    .++|++++.+-|.+
T Consensus       349 TDnHlvLvDLr~~G~d---GarvE~vle~---~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~  422 (477)
T KOG2467|consen  349 TDNHLVLVDLRPKGVD---GARVEKVLEL---CHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDR  422 (477)
T ss_pred             ccceEEEEeccccCCc---hHHHHHHHHH---hhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHH
Confidence            3467777766543200   1122233322   244443333222222234678999876654    46899999998887


Q ss_pred             HHHH
Q psy15447        447 SHDI  450 (457)
Q Consensus       447 ~~~~  450 (457)
                      +.+.
T Consensus       423 av~i  426 (477)
T KOG2467|consen  423 AVKI  426 (477)
T ss_pred             HHHH
Confidence            7654

>KOG0258|consensus

Probab=99.33  E-value=1.5e-09  Score=101.03  Aligned_cols=336  Identities=13%  Similarity=0.130  Sum_probs=187.6

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHHHHHHhhc-CCCCEEEEeC
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSASAIAAYV-KRNDAVFVDE  171 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~~~  171 (457)
                      .++++.+...|...|-+.+.+....|..-.+..+++.+.+.-|.    +.++++++.+.|+...++.++ ++++-|+++-
T Consensus        89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi  168 (475)
T KOG0258|consen   89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI  168 (475)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence            34566666666654433333334445555555555555555552    234444555678888887765 5667889988


Q ss_pred             cccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILS  241 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~  241 (457)
                      +-|+-+-..+.+.|...+.+-       ..|.++|++.+++...+     -..++++|++ +-||||.+..   +++|..
T Consensus       169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~-----i~~r~lvvIN-PGNPTGqvls~e~ie~i~~  242 (475)
T KOG0258|consen  169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKG-----INPRALVVIN-PGNPTGQVLSEENIEGIIC  242 (475)
T ss_pred             CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhcc-----CCceEEEEEC-CCCccchhhcHHHHHHHHH
Confidence            888777777777776554332       12789999999876532     1234455555 5569998865   889999


Q ss_pred             HHHHcCcEEEEEcCcccccccCCCC--cc---ccccC-CCCCCcc-EEEecCcccc----cCcccEE--Ee-cHHHHHHH
Q psy15447        242 LRSKYQARIFVDESVSFGTLGSTGH--GV---TEYFG-VSTEEVD-MIIGSLEHAL----GSVGGFC--VG-SSYIIEHH  307 (457)
Q Consensus       242 l~~~~g~~li~DEa~~~g~~g~~g~--~~---~~~~~-~~~~~~D-i~~~s~sK~l----g~~gG~v--~~-~~~~~~~~  307 (457)
                      .|.++|++|+.||+|---++....+  .+   .-+.| .-++++- +-.+|.||++    |..|||+  +. .+++.+.+
T Consensus       243 fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi  322 (475)
T KOG0258|consen  243 FAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQI  322 (475)
T ss_pred             HHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHH
Confidence            9999999999999976554432111  11   01111 1122222 3356778988    3568885  22 23333333


Q ss_pred             HhhCCcceecC---------CCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        308 RLSGSGYCFSA---------SLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       308 ~~~~~~~~~~~---------~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      ........+..         -.+|..  -+-.+.+.. .+.+...+.++++++.+.+.++.   +.|+.+. +.++.|..
T Consensus       323 ~Kl~si~lc~~V~GQ~~vdl~VnPP~--Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns---~~gi~cn-~~qGAMY~  396 (475)
T KOG0258|consen  323 KKLASIKLCPQVSGQKLVDLVVNPPK--PGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNS---LEGISCN-PVQGAMYL  396 (475)
T ss_pred             HHHHhhhhcCCccchhhhceecCCCC--CCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhh---cCceeec-cCccceee
Confidence            22111100000         000000  011112111 12345778888999999999988   7899987 55666554


Q ss_pred             EE-ecCCcch-HHHH---HHH-HHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        378 LY-LQKSDDE-VASK---KLL-QTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       378 i~-~~~~~~~-~~~~---~~~-~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +. +.-+... +.+.   ... .-.|.+|++. ||.+.|+..+..  .++.-++|.++-...    + ..++.++++.++
T Consensus       397 fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ--~~GtyH~R~TiLp~~----~-~~i~~~~~fH~~  469 (475)
T KOG0258|consen  397 FPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQ--KEGTYHFRTTILPPG----L-EIIEKFKKFHAE  469 (475)
T ss_pred             cccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCC--CCceeEEEEeecCch----h-HHHHHHHHHHHH
Confidence            42 2222111 1110   011 1256777776 999999876533  333447888763222    3 555555555444


Q ss_pred             h
Q psy15447        451 A  451 (457)
Q Consensus       451 ~  451 (457)
                      +
T Consensus       470 f  470 (475)
T KOG0258|consen  470 F  470 (475)
T ss_pred             H
Confidence            3

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.33  E-value=5.6e-10  Score=104.45  Aligned_cols=326  Identities=10%  Similarity=0.019  Sum_probs=184.6

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCC--CCCCCCCcccChHHHHHHHHHHHh-hcCCC-------c--EEEecc
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGV--GSCGPRGFYGTNVVHLDLENDIAS-FMGLE-------E--TALYSF  148 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~--~~~~~~~~~g~~~~~~~l~~~la~-~~g~~-------~--~i~~~s  148 (457)
                      .-+|+.-+.|.+-.+.+.+..+++++-++.-.  .+..+-...|.    ..+.+.+++ ++|.+       +  .+-+.+
T Consensus        27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~----~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G  102 (396)
T COG1448          27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGL----PEFLEAVQKLLFGADSPALAEDRVATVQTLG  102 (396)
T ss_pred             CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCc----HHHHHHHHHHhcCCCcHHHHhhhHhheecCC
Confidence            45677666665555444444444443333211  11122223343    344444444 35533       1  355678


Q ss_pred             cHHHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        149 GFSTSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       149 G~~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      |+.|+..+-.-+  ..+...|.++++.++....-+...|.++..|++-       |.+.+-..|++..        .+..
T Consensus       103 GTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~--------~~~v  174 (396)
T COG1448         103 GTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP--------EGSV  174 (396)
T ss_pred             cchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCC--------CCCE
Confidence            998877765443  3456679999999888888888889999888754       3445544554432        3334


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccc-cCCCCCCccEEEecCcccccCc-
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEY-FGVSTEEVDMIIGSLEHALGSV-  293 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~-~~~~~~~~Di~~~s~sK~lg~~-  293 (457)
                      ++.=...+||||.-+.   +++|.++.++.|.+-++|=|| +|+.-...-...... ....+.  -++..|+||.||.- 
T Consensus       175 vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~--~lva~S~SKnfgLYg  252 (396)
T COG1448         175 VLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE--LLVASSFSKNFGLYG  252 (396)
T ss_pred             EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCc--EEEEehhhhhhhhhh
Confidence            4555567789998776   679999999999999999986 443210000000000 011111  47889999999853 


Q ss_pred             ---ccE--EEecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHH-----HHH--hhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        294 ---GGF--CVGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKAL-----HLL--KANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       294 ---gG~--v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l-----~~~--~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                         |++  ++.+++..+.+...-   -+..||. +|...++.....|     +..  .+..++++++.+++..|.+.|++
T Consensus       253 ERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn-PP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~  331 (396)
T COG1448         253 ERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN-PPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKA  331 (396)
T ss_pred             hccceeEEEeCCHHHHHHHHHHHHHHHHhccCC-CchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               343  344444444432211   1123443 3333333332222     111  12246788999999999999987


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      ...-..+.+.....+ |+... +-         .. +=+++|++ .|||+...+             ||++.. +++..|
T Consensus       332 ~~~~~~f~~i~~Q~G-MFsy~-Gl---------s~-~QV~rLree~~IY~v~sG-------------Ri~vaG-l~~~ni  385 (396)
T COG1448         332 LGAPRNFDFIISQRG-MFSYT-GL---------SP-EQVDRLREEFGIYLVASG-------------RINVAG-LNTSNI  385 (396)
T ss_pred             hCCCcccchHhhcCc-eeecC-CC---------CH-HHHHHHHHhccEEEecCC-------------eeeecc-CChhhH
Confidence            332233555433333 33322 11         11 23345554 599987532             788754 799999


Q ss_pred             HHHHHHHHHH
Q psy15447        438 NSLIETLCKS  447 (457)
Q Consensus       438 ~~~~~~l~~~  447 (457)
                      +.+.++|.++
T Consensus       386 ~~va~ai~~v  395 (396)
T COG1448         386 DYVAKAIAAV  395 (396)
T ss_pred             HHHHHHHHhh
Confidence            9999998765

>KOG1383|consensus

Probab=99.31  E-value=6.5e-10  Score=106.06  Aligned_cols=343  Identities=14%  Similarity=0.179  Sum_probs=216.0

Q ss_pred             EECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcE---EEecccHHH
Q psy15447         76 NINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEET---ALYSFGFST  152 (457)
Q Consensus        76 ~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~---i~~~sG~~a  152 (457)
                      ..||+.-++.+|+.  .+..+++..+-+.+.+.++  .++.+..+.+......+.-..++.+++.+..   ..+++|+++
T Consensus        75 ~ld~~~~~~~vS~~--v~~~~~~~~~l~~~~~~k~--N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses  150 (491)
T KOG1383|consen   75 MLDGNPRLGLASGV--VYWGEPELDKLIMEAYNKF--NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSES  150 (491)
T ss_pred             ccCCCcccCeeeEE--EecCCcchhhHHHHHHhhc--CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchH
Confidence            34677556666542  2223677777777777775  5555666667777777777788888875432   456778888


Q ss_pred             HHHHHHhhcC-----CC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCcc
Q psy15447        153 SASAIAAYVK-----RN---DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       153 ~~~ai~a~~~-----~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      +..+.+.+..     ++   ..++.....|.+..+..+..+.++..++..      |+..+.+.+.           +++
T Consensus       151 ~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~-----------eNt  219 (491)
T KOG1383|consen  151 GLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMID-----------ENT  219 (491)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhc-----------cce
Confidence            7766655421     11   356777888999999988888777776654      6677777665           467


Q ss_pred             EEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc-ccCcc-c
Q psy15447        219 KFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA-LGSVG-G  295 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~-lg~~g-G  295 (457)
                      ++++.+-++-|.|.+.++++|.++.-+ +++.+++|.+-|..+.. .+-.....||..-..+.-+..+-||. |.+.| +
T Consensus       220 i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p-~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~  298 (491)
T KOG1383|consen  220 IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINP-AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSS  298 (491)
T ss_pred             EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccccc-ccccCccccccCCCCceeEeeccceeeeeecCcE
Confidence            889999888899999999999999988 99999999987654441 11111123443322333445566673 22333 4


Q ss_pred             E-EEecHHHHHHHHhhC--------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447        296 F-CVGSSYIIEHHRLSG--------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQR  364 (457)
Q Consensus       296 ~-v~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~  364 (457)
                      + +..++++..+.-...        ..++..++-+....++.-+++-.+.++  .+..+++.++...+++.+++   +.+
T Consensus       299 ~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~---i~~  375 (491)
T KOG1383|consen  299 WVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIEN---IKG  375 (491)
T ss_pred             EEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhc---ccc
Confidence            4 444444433321100        011111221222223333343333222  35667888999999999999   788


Q ss_pred             eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH-HHHHHH
Q psy15447        365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM-NSLIET  443 (457)
Q Consensus       365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi-~~~~~~  443 (457)
                      +.+.+.   |.+.+.+.+....     .-.++.+.|.++|-.+.....|        ..+-+++...+.++++ |+++.-
T Consensus       376 i~i~gk---p~vs~~~~~s~~~-----~i~elsd~l~~~GW~lnalq~P--------~a~Hi~vt~~~~~~~~A~~~v~D  439 (491)
T KOG1383|consen  376 IKIVGK---PLVSFILFGSNDV-----NIFELSDLLRKKGWILNALQFP--------AAIHICVTRVHAREDVADRFVAD  439 (491)
T ss_pred             ceecCC---CcEEEEEccCCcc-----chhhhhHHHHhcCcCccccCCC--------CceEEEEEeeeccHHHHHHHHHH
Confidence            888754   4454444333211     4457889999999766554432        4677888777777774 678888


Q ss_pred             HHHHHHHhcC
Q psy15447        444 LCKSHDIAVQ  453 (457)
Q Consensus       444 l~~~~~~~~~  453 (457)
                      |++++.++..
T Consensus       440 i~~~~~el~~  449 (491)
T KOG1383|consen  440 IRKVVEELKS  449 (491)
T ss_pred             HHHHHHHHHh
Confidence            8888877753

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=99.27  E-value=3.2e-09  Score=100.97  Aligned_cols=301  Identities=12%  Similarity=0.092  Sum_probs=157.6

Q ss_pred             HHHHHhhcCCC---cEEEecccH-HHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCH
Q psy15447        131 ENDIASFMGLE---ETALYSFGF-STSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNM  196 (457)
Q Consensus       131 ~~~la~~~g~~---~~i~~~sG~-~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~  196 (457)
                      ...+-+..|..   .++++.-.+ .++...+.++  ...++.|+.+...|.+-+.++...|.+++.++.        .|.
T Consensus        62 ~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~  141 (389)
T PF05889_consen   62 VLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDL  141 (389)
T ss_dssp             HHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHH
T ss_pred             HHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccH
Confidence            33444455643   466665433 2333334343  356789999999999999999999988776653        257


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      +.+|+.+++..        ....+.++.+.....|..++ +.+|.++|++||+..++-.||+.-.- ..-+-+...+.  
T Consensus       142 ~~ie~~i~~~G--------~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~~--  210 (389)
T PF05889_consen  142 EAIEAKIEELG--------ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAWR--  210 (389)
T ss_dssp             HHHHHHHHHHC--------GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHHH--
T ss_pred             HHHHHHHHHhC--------CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHHh--
Confidence            88999997765        23455556666666788887 99999999999999999999876100 00000000000  


Q ss_pred             CCCccEEEecCccccc-Cccc-EEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHH
Q psy15447        276 TEEVDMIIGSLEHALG-SVGG-FCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCN  350 (457)
Q Consensus       276 ~~~~Di~~~s~sK~lg-~~gG-~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~  350 (457)
                      --++|..+.|..|-|= +.|| .+++. +..+..+...-.+-   .+..|..-  ...+|..+...  ..++....+.-.
T Consensus       211 ~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR---as~sp~ld--~~itLl~LG~~g~~~ll~~r~~~f~  285 (389)
T PF05889_consen  211 VGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR---ASASPSLD--LFITLLSLGCTGYGALLKERKASFP  285 (389)
T ss_dssp             HSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH---BTSHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh---hhcccchH--HHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            0133677889999882 3344 44444 45666554322111   12222211  12222222111  123344444555


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCc---c---ccCCCCCe
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLD---Q---EAKKQKPS  423 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~---~---~~~~~~~~  423 (457)
                      ++.+.|++.....+-.+...+..++ +.+.+..-....  ......+...|..+||--..+.-+.   .   ....+.++
T Consensus       286 ~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~--~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Y  363 (389)
T PF05889_consen  286 YLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEIS--QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPY  363 (389)
T ss_dssp             HHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCC--SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSE
T ss_pred             HHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhc--cchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHH
Confidence            5555554432223433322233333 333333211000  0145678899999976432211110   0   00112478


Q ss_pred             EEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        424 IRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       424 lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +-++....+++||+|.+++.|+++++
T Consensus       364 lt~AsaiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  364 LTAASAIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             EEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence            99988899999999999999999874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.27  E-value=7.1e-10  Score=105.42  Aligned_cols=223  Identities=12%  Similarity=0.091  Sum_probs=151.4

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEE-----e
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFV-----D  170 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~-----~  170 (457)
                      +|+..+++.+.+..+-.-- .........+-...+.+.++..+|.+.+.++++.+.|+..++.++..++..|+-     +
T Consensus        40 ~~e~iea~~~~~~~~v~Le-~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~  118 (395)
T COG1921          40 SPEAIEAMKEAMRAPVELE-TDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE  118 (395)
T ss_pred             CHHHHHHHHHHhcccceee-eecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc
Confidence            6889999888887643211 111111122333467777777888899999999999999888888875555542     3


Q ss_pred             CcccHHHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC
Q psy15447        171 ENINFAIQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ  247 (457)
Q Consensus       171 ~~~h~~~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g  247 (457)
                       +.|+.+...+++.|++++.+...   ...+.+.+|.+..         ...+-+..+-+..+ ...+++++.++|++||
T Consensus       119 -gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~t---------a~llkV~s~~~~f~-~~l~~~~l~~ia~~~~  187 (395)
T COG1921         119 -GGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENT---------ALLLKVHSSNYGFT-GMLSEEELVEIAHEKG  187 (395)
T ss_pred             -CCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccCC---------eeEEEEeecccccc-ccccHHHHHHHHHHcC
Confidence             57888999999999999887643   5778888886532         11233333322112 2346889999999999


Q ss_pred             cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHH
Q psy15447        248 ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAV  326 (457)
Q Consensus       248 ~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  326 (457)
                      +.+|+|.+-+.-+--  -....+..   ..++|+++.|-.|.|| +.+|.++|++++++.+++....  +..-......+
T Consensus       188 lpvivD~aSg~~v~~--e~~l~~~l---a~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~--Ralrv~K~tla  260 (395)
T COG1921         188 LPVIVDLASGALVDK--EPDLREAL---ALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLK--RALRVDKETLA  260 (395)
T ss_pred             CCEEEecCCcccccc--ccchhHHH---hcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhh--hhhhcCcHhHH
Confidence            999999985432110  01111111   2456999999999996 5689999999999998765533  33334667778


Q ss_pred             HHHHHHHHHhh
Q psy15447        327 AANKALHLLKA  337 (457)
Q Consensus       327 aa~a~l~~~~~  337 (457)
                      +..++|+....
T Consensus       261 ~l~~aLe~y~~  271 (395)
T COG1921         261 ALEAALELYLQ  271 (395)
T ss_pred             HHHHHHHHHcC
Confidence            88888887654

>KOG0629|consensus

Probab=99.22  E-value=2.5e-09  Score=100.75  Aligned_cols=305  Identities=12%  Similarity=0.090  Sum_probs=175.2

Q ss_pred             HHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHHHHhcC---CeE
Q psy15447        129 DLENDIASFMGLE---ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTGLIASR---CKV  188 (457)
Q Consensus       129 ~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~~~~~g---~~~  188 (457)
                      ++-.++-++.|.+   +.+|..+|+-+|..++.+..-              |.-+++.++.+|.++.++....|   -.+
T Consensus       145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c  224 (510)
T KOG0629|consen  145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHC  224 (510)
T ss_pred             HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCcee
Confidence            3334444445533   569999999988888754321              22356778889999999998887   344


Q ss_pred             EEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        189 QYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       189 ~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      +.++.+     ++++||+.|.+..++     +..+.+|-.......-|...||..|+++|++|++|+++|.|++.|.+=.
T Consensus       225 ~~v~t~e~Gkm~~~dLe~kile~k~k-----g~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS  299 (510)
T KOG0629|consen  225 IKVKTDERGKMIPDDLEKKILEAKAK-----GGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMS  299 (510)
T ss_pred             EEecccccCccchHHHHHHHHHHHhc-----CCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccC
Confidence            555433     799999998775531     1223344444444446889999999999999999999999998766422


Q ss_pred             -CCCccccccCCCCCCccEEEecCcccccCc--ccEEEecHH-HHHHHHhhCCccee----------cCCCcHHHHHHHH
Q psy15447        264 -TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSY-IIEHHRLSGSGYCF----------SASLPPFLAVAAN  329 (457)
Q Consensus       264 -~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~aaa~  329 (457)
                       .-+.  ..-|++  ++|.+..+.||.+|.+  .+++..+.+ +.+.-......|.|          -++--.+.|..-.
T Consensus       300 ~k~R~--kl~Gie--ra~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~  375 (510)
T KOG0629|consen  300 RKHRH--KLTGIE--RANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV  375 (510)
T ss_pred             hhhHh--hccCcc--ccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc
Confidence             1121  334564  4578888999999853  244333332 11111111111111          1111222221110


Q ss_pred             HH--HHHHh------hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--CCCCeEEEEecCC----cch-----HHHH
Q psy15447        330 KA--LHLLK------ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--RDTPLKYLYLQKS----DDE-----VASK  390 (457)
Q Consensus       330 a~--l~~~~------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~i~~~~~----~~~-----~~~~  390 (457)
                      -.  +-++.      .-+..++++-++++||.+.|++   ..+....-.  +....+.+....+    .+.     ..-.
T Consensus       376 D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lre---r~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~  452 (510)
T KOG0629|consen  376 DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRE---REGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLV  452 (510)
T ss_pred             cHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHh---cccceehhcCCCceEEEeeccCchHhccCcccchhhhHHH
Confidence            11  11111      1135678888999999999998   445443322  2222222221111    000     1111


Q ss_pred             HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHH
Q psy15447        391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..+-.+...++++|-...... |.   ..-++.+|..+ +...+.+|+|.+++.|..+.+
T Consensus       453 kVaPkIK~~Mm~~Gt~Mi~Yq-Pl---~~~~nffr~v~sn~a~~~ad~dflldEIerlgq  508 (510)
T KOG0629|consen  453 KVAPKIKERMMKKGTTMIGYQ-PL---GDKPNFFRMVISNPALTEADLDFLLDEIERLGQ  508 (510)
T ss_pred             hhCcHHHHHHHhccceeeEec-cc---ccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence            233457778888987654322 11   11246777765 345799999999999987643

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.16  E-value=4.3e-08  Score=91.61  Aligned_cols=246  Identities=17%  Similarity=0.190  Sum_probs=130.4

Q ss_pred             ccChH-HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeCcc-cHHHHHHHHhc----------C
Q psy15447        121 YGTNV-VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDENI-NFAIQTGLIAS----------R  185 (457)
Q Consensus       121 ~g~~~-~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~~~-h~~~~~~~~~~----------g  185 (457)
                      ||..+ -++.|++-.|+.+|.|.+++   +.||++|+..++.++.+|||.++.-.+. |-.....+-+.          |
T Consensus        49 YGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G  128 (403)
T PF06838_consen   49 YGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG  128 (403)
T ss_dssp             T-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred             CCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence            44444 46679999999999999987   5799999999999999999998864433 33333333222          2


Q ss_pred             CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC--ChHHHHHHH---HH--cCcEEEEE
Q psy15447        186 CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC--PLKDILSLR---SK--YQARIFVD  253 (457)
Q Consensus       186 ~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~--~l~~i~~l~---~~--~g~~li~D  253 (457)
                      .....++.     .|.+.+++.++.           ++++|.+.-..+-+ ...  .+++|.++|   |+  -++++++|
T Consensus       129 i~Y~~v~L~~dg~~D~~~i~~~~~~-----------~tk~v~IQRSrGYs-~R~sl~i~~I~~~i~~vk~~~p~~iifVD  196 (403)
T PF06838_consen  129 IKYREVPLTEDGTIDWEAIKKALKP-----------NTKMVLIQRSRGYS-WRPSLTIEEIKEIIKFVKEINPDVIIFVD  196 (403)
T ss_dssp             -EEEE--B-TTSSB-HHHHHHHHHT-----------TEEEEEEE-S-TTS-SS----HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             ceeEEEeecCCCCcCHHHHHHhhcc-----------CceEEEEecCCCCC-CCCCCCHHHHHHHHHHHHhhCCCeEEEEe
Confidence            33333332     278888888863           45777775322110 111  244555554   44  38999999


Q ss_pred             cCcccccccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--Ccc--eecCCCcHHHH
Q psy15447        254 ESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGY--CFSASLPPFLA  325 (457)
Q Consensus       254 Ea~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~  325 (457)
                      .+|+..+-         ...-..-++|++.||+=|..|+    .|||++|++++++......  .+.  ..+.++.  ..
T Consensus       197 NCYGEFvE---------~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~--~~  265 (403)
T PF06838_consen  197 NCYGEFVE---------TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLG--TN  265 (403)
T ss_dssp             -TTTTTTS---------SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TT--TH
T ss_pred             CCcceecc---------ccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcc--hH
Confidence            99875321         1111113559999999999963    5899999999999874332  111  1111110  00


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---C-CeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---T-PLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      -.....|-+   -+.......+-+......+++    .|+++.....   + -+..+.++++.       ...++|+..+
T Consensus       266 R~~~QGlFl---AP~vV~eAlKgaif~A~~fe~----lG~~v~P~~~~~R~DiIQai~l~~~e-------~l~~FC~~iQ  331 (403)
T PF06838_consen  266 RLMFQGLFL---APHVVGEALKGAIFAAALFEK----LGFEVSPKPDDPRSDIIQAIELGSPE-------KLIAFCQGIQ  331 (403)
T ss_dssp             HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH----TT-EEES-TTS--SSS-EEEE-SSHH-------HHHHHHHHHH
T ss_pred             HHHHhHHhh---chHHHHHHHHHHHHHHHHHHH----cCCcCCCCCCCCCCceEEEEECCCHH-------HHHHHHHHHH
Confidence            111111110   122222232333333444555    7888753322   2 35567777765       7778888887


Q ss_pred             Hc
Q psy15447        402 QA  403 (457)
Q Consensus       402 ~~  403 (457)
                      +.
T Consensus       332 ~~  333 (403)
T PF06838_consen  332 AA  333 (403)
T ss_dssp             HT
T ss_pred             hc
Confidence            65

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.11  E-value=2.4e-08  Score=105.55  Aligned_cols=310  Identities=11%  Similarity=0.114  Sum_probs=184.1

Q ss_pred             eeeEEeecCCccCCCCChhhH-HHHHHHHHhcC----CCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIE-KCAIDCIDKNG----VGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~-~a~~~~l~~~~----~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a  152 (457)
                      +.+..|.+.+|.++- -|.++ +.+   +.+-+    ..+.-+-..+|..+...+++..+++++|.+  .+=++..++.+
T Consensus        78 ~~~~~fiG~G~y~~~-~P~vi~~~i---~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~  153 (954)
T PRK12566         78 QVWTSLIGMGYHGTV-TPTVILRNV---LENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAA  153 (954)
T ss_pred             CCccccccccccCCc-CcHHHHHHH---HhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHH
Confidence            335556665555543 24433 333   33322    123333345678888899999999999988  44566666654


Q ss_pred             HHHHHHhh---cCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        153 SASAIAAY---VKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       153 ~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      -++++.+.   .++...+++++..|+.+...++    ..|.+++.      +++++.+.           +.+..|++..
T Consensus       154 aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~-----------~~~~~v~vq~  216 (954)
T PRK12566        154 AEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAA-----------HAVFGALLQY  216 (954)
T ss_pred             HHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCC-----------CCEEEEEEEC
Confidence            44333222   2235679999999998776443    34555553      33433321           3466777766


Q ss_pred             CCCCCCCCCChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCccccc------Cc-ccEE
Q psy15447        226 VYMNSADICPLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG------SV-GGFC  297 (457)
Q Consensus       226 v~~~~G~i~~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg------~~-gG~v  297 (457)
                      ++ ..|.+.++++|.+++|+.|+++|+-- --+.+.+-+.|     .+     ++||+++ -++.||      ++ .||+
T Consensus       217 P~-~~G~i~d~~~i~~~~h~~gal~~~~~d~laL~ll~~Pg-----e~-----GADI~vG-~~Q~fGvp~~~GGP~ag~~  284 (954)
T PRK12566        217 PD-THGEIRDLRPLIDQLHGQQALACVAADLLSLLVLTPPG-----EL-----GADVVLG-STQRFGVPMGYGGPHAAYF  284 (954)
T ss_pred             CC-CceEEccHHHHHHHHHHcCCEEEEEeCHHHHhCCCChh-----hc-----CCcEEee-CCCcCCCCCCCCCCCeeee
Confidence            65 56999999999999999999876432 23444443222     23     4589876 355444      22 2788


Q ss_pred             EecHHHHHHHHh----------hCCccee--------------cCC-C-cHHHHHHHHHHHH-HHhh---CcHHHHHHHH
Q psy15447        298 VGSSYIIEHHRL----------SGSGYCF--------------SAS-L-PPFLAVAANKALH-LLKA---NPSLLTKLRE  347 (457)
Q Consensus       298 ~~~~~~~~~~~~----------~~~~~~~--------------~~~-~-~~~~~aaa~a~l~-~~~~---~~~~~~~l~~  347 (457)
                      ++++++...+.-          ....|..              +.+ . +...+|. .+++- .+..   ..++.++...
T Consensus       285 a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~-~a~~Y~~~~Gp~Gl~~ia~~~~~  363 (954)
T PRK12566        285 ACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLAN-IAGFYAVYHGPEGLKRIAQRVHR  363 (954)
T ss_pred             eehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHH-HHHHHHHHhChHHHHHHHHHHHH
Confidence            988887766510          0011110              111 1 2222222 22221 1211   1234556777


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      ++.++.+.|.+    .|+++....-...+.+.+  ..       .+.++.++..++|+-++...         .+.+.++
T Consensus       364 ~a~~l~~~l~~----~g~~~~~~~fF~~~~v~~--~~-------~~~~~~~~a~~~~~n~r~~~---------~~~~~~s  421 (954)
T PRK12566        364 LTAILAAGLEA----KGIKRLNRHFFDTLTLEV--GG-------AQAAIIESAEAARINLRILG---------RGRLGVS  421 (954)
T ss_pred             HHHHHHHHHHh----cCCccccCCccceEEEEc--cC-------CHHHHHHHHHHCCCeeEEeC---------CCeEEEE
Confidence            88899999988    788775332222333344  21       24468888889999887643         4689999


Q ss_pred             ecCCCCHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLC  445 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~  445 (457)
                      +.-++|++|++.+++++.
T Consensus       422 ~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        422 LDETCDEATVARLFDIFL  439 (954)
T ss_pred             eCCCCCHHHHHHHHHHhc
Confidence            999999999999999984

>KOG2040|consensus

Probab=99.09  E-value=8e-09  Score=101.88  Aligned_cols=303  Identities=13%  Similarity=0.121  Sum_probs=187.7

Q ss_pred             ccChHHHHHHHHHHHhhcCCCcEEE-ecccHH---HHHHHHHhhc-CCC----CEEEEeCcccHHHHHHHHhcCCeEEEe
Q psy15447        121 YGTNVVHLDLENDIASFMGLEETAL-YSFGFS---TSASAIAAYV-KRN----DAVFVDENINFAIQTGLIASRCKVQYF  191 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g~~~~i~-~~sG~~---a~~~ai~a~~-~~g----d~v~~~~~~h~~~~~~~~~~g~~~~~~  191 (457)
                      .|......+|++.|+++.|.+..-+ -+||..   |-..+|+++. .+|    .+-+++...|+.....+.+.|-+++++
T Consensus       578 qGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV  657 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV  657 (1001)
T ss_pred             hhHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEe
Confidence            3557788999999999999987654 467764   4556777764 233    367889999999888999999998887


Q ss_pred             cCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        192 KHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       192 ~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                      ...     |+.+|+...+++.        ++.+++++.-+. ..|...+ ++++.++.++||--+.+|.+..--..|-..
T Consensus       658 ~~~~~G~id~~dLk~kaekh~--------~~Laa~MvTYPS-T~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~  728 (1001)
T KOG2040|consen  658 GCDANGNIDMVDLKAKAEKHK--------DNLAALMVTYPS-THGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCR  728 (1001)
T ss_pred             eccCCCCccHHHHHHHHHHhh--------hhhheeEEeccc-ccccccccHHHHHHHHHhcCCEEEecCCCccceecccC
Confidence            643     7889988887765        456677666554 3466655 999999999999999999974311122111


Q ss_pred             CccccccCCCCCCccEEEecCcccccC---cc----cEEEecHHHHHHHHhhC---------CcceecCCCcHHHHHHH-
Q psy15447        266 HGVTEYFGVSTEEVDMIIGSLEHALGS---VG----GFCVGSSYIIEHHRLSG---------SGYCFSASLPPFLAVAA-  328 (457)
Q Consensus       266 ~~~~~~~~~~~~~~Di~~~s~sK~lg~---~g----G~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~aaa-  328 (457)
                      .|   .+|     .|+.--.++|+|+.   .|    |-+..++.++.++....         .....+.+..|...+.. 
T Consensus       729 pG---d~G-----aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~IL  800 (1001)
T KOG2040|consen  729 PG---DIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALIL  800 (1001)
T ss_pred             Cc---ccc-----ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceee
Confidence            11   123     25666689999952   12    33444555554442110         00011111122221111 


Q ss_pred             ---HHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe---EEEEecCCcchHHHHHHHHHHHHHH
Q psy15447        329 ---NKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL---KYLYLQKSDDEVASKKLLQTICDMC  400 (457)
Q Consensus       329 ---~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~l  400 (457)
                         -+=++++...  .+.-+-..-|+.|+.++|+.   .-.+-+. ...+.+   +.+.+..-+  ..+...+.+++++|
T Consensus       801 pISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~---hYkil~~-~~~~~vaHEFIlD~r~fK--~~agieavDvAKRL  874 (1001)
T KOG2040|consen  801 PISWAYIKMMGSGGLKDASKIAILNANYMAKRLES---HYKILFR-GENGLVAHEFILDLRPFK--KTAGIEAVDVAKRL  874 (1001)
T ss_pred             hhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh---ccceeEe-cCCcceeeeeeeechhhc--cccCCcHHHHHHHH
Confidence               1224444332  22223344578899999987   2333333 222322   222221111  11112567899999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++.|+......+|      ..+.+.|-|+-.-+.+|+|++++++-.+.+++.
T Consensus       875 ~DYgFHaPTmswP------V~gtLMIEPTESE~k~ElDRfcdAliSIreEI~  920 (1001)
T KOG2040|consen  875 MDYGFHAPTMSWP------VAGTLMIEPTESEDKAELDRFCDALISIREEIA  920 (1001)
T ss_pred             HhccCCCCccccc------cCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence            9999987666654      358999999998999999999999877766553

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.06  E-value=1.5e-07  Score=87.13  Aligned_cols=311  Identities=15%  Similarity=0.143  Sum_probs=172.8

Q ss_pred             HHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC-----CCCEEEEeCcccHHH-HHHHHhcCCeEEE----------
Q psy15447        127 HLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK-----RNDAVFVDENINFAI-QTGLIASRCKVQY----------  190 (457)
Q Consensus       127 ~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~-----~gd~v~~~~~~h~~~-~~~~~~~g~~~~~----------  190 (457)
                      ...|++...+.+|.+..+-+..|-.|-...+..+.+     +|...++...+|..+ .......|+..+-          
T Consensus        81 ~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~  160 (471)
T COG3033          81 YYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTE  160 (471)
T ss_pred             HHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccccccccccccc
Confidence            367888999999998888888887765555555544     444445555566554 4445566654332          


Q ss_pred             ----ecCC-CHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCc-cccc
Q psy15447        191 ----FKHN-NMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYMNSADICP---LKDILSLRSKYQARIFVDESV-SFGT  260 (457)
Q Consensus       191 ----~~~~-d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~-~~g~  260 (457)
                          |..| |++.|++.|++...       +++..|++. +.++.+|....   ++++++||++|++.++.|.+. ..-.
T Consensus       161 ~~~pFKGd~D~~kLe~lidevG~-------~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa  233 (471)
T COG3033         161 VKYPFKGNFDLEKLERLIDEVGA-------DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA  233 (471)
T ss_pred             ccCCCCCccCHHHHHHHHHHhCc-------ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence                1122 78999999998763       445554443 33334565444   789999999999999999863 1111


Q ss_pred             c--cCCCCccccccCCC------CCCccEEEecCcc-cccCcccEEEecHH----HHHHHHhhC---Ccc-eecCCCcHH
Q psy15447        261 L--GSTGHGVTEYFGVS------TEEVDMIIGSLEH-ALGSVGGFCVGSSY----IIEHHRLSG---SGY-CFSASLPPF  323 (457)
Q Consensus       261 ~--g~~g~~~~~~~~~~------~~~~Di~~~s~sK-~lg~~gG~v~~~~~----~~~~~~~~~---~~~-~~~~~~~~~  323 (457)
                      +  -....+. ..+-+.      ..-.|-.+.|.-| ++-..||+++.+++    +.+..+...   .++ +|+ ++..-
T Consensus       234 YFIk~rE~gY-rd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG-gl~Gr  311 (471)
T COG3033         234 YFIKQREPGY-RDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG-GLAGR  311 (471)
T ss_pred             hhhhhcCccc-ccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccccC-cccch
Confidence            1  0000000 001110      0011333444444 23346899888765    444443221   111 122 12211


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHH-
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCI-  401 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~-  401 (457)
                      .+.+....|..--+.+ ..++--+..+||.+.|.+    .|+++..+.+++-+.+....-.+. +.+.-.++.++-+|- 
T Consensus       312 dmealAvGL~e~~~~~-yl~~Rv~Qv~YL~~~l~~----~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~  386 (471)
T COG3033         312 DMEALAVGLREGVNFD-YLAHRVAQVQYLADGLEE----AGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYK  386 (471)
T ss_pred             hHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHh----cCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHH
Confidence            1111111222211222 333344567899999999    899888777888777654432111 222223455655554 


Q ss_pred             HcCeeEeccccCcc--------ccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        402 QAGFAITCPSHLDQ--------EAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~--------~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.||-..-.+....        ..+..-+.+|+.++ .+.|.+.+|.++++++++.+..
T Consensus       387 e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~  445 (471)
T COG3033         387 EAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA  445 (471)
T ss_pred             HhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence            44776643322111        11223467999975 5569999999999999887654

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=99.01  E-value=7.4e-10  Score=104.44  Aligned_cols=242  Identities=16%  Similarity=0.190  Sum_probs=56.0

Q ss_pred             ChhhHHHHHHHHHhcCCCC----CCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         96 NPDIEKCAIDCIDKNGVGS----CGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      ++++.+++.+.+..|..--    .|.|     ..-+..+++.+++++|.+.++++++...|+..++.++.. +..|++++
T Consensus        19 ~~~a~~a~~~~a~~Y~nLE~dl~~G~R-----g~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~-~~EvIvsR   92 (367)
T PF03841_consen   19 SEEAIEAVAEVASGYSNLEYDLETGKR-----GSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAK-GKEVIVSR   92 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence            4667777777766553211    1111     122456788899999999999999999999988887764 45566655


Q ss_pred             ccc------HHHHHHHHhcCCeEEEecCCC---HHHHHHHHHhhchhcccCCCCccEEEE-Ee-cCCCCCC--CCCChHH
Q psy15447        172 NIN------FAIQTGLIASRCKVQYFKHNN---MQHLEELLRQQDERDTLNSKVTKKFII-VE-GVYMNSA--DICPLKD  238 (457)
Q Consensus       172 ~~h------~~~~~~~~~~g~~~~~~~~~d---~~~le~~l~~~~~~~~~~~~~~~~~vi-~e-~v~~~~G--~i~~l~~  238 (457)
                      +.-      +.+..-++.+|++++.+...+   +++.+++|.+           ++++++ +. +-+...|  ...++++
T Consensus        93 GelVeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e-----------~Ta~ll~Vh~Sn~~i~GFt~~~~~~e  161 (367)
T PF03841_consen   93 GELVEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITE-----------NTAALLKVHTSNFRIQGFTGEVSLEE  161 (367)
T ss_dssp             -------------------------------------------------------------------------------H
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc-----------cccccccccccccccccccccccHHH
Confidence            532      224456777888887776543   5666666654           344443 33 2222333  2357999


Q ss_pred             HHHHHHHcCcEEEEEcCccccc----ccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCc
Q psy15447        239 ILSLRSKYQARIFVDESVSFGT----LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSG  313 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~~g~----~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~  313 (457)
                      +.+++++|++.+|+|-.-+...    +|-.....  .+..-..++|+++.|-.|.+|+ ..|.++|++++++.++.....
T Consensus       162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~--v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~  239 (367)
T PF03841_consen  162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPT--VQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLG  239 (367)
T ss_dssp             HHHHHHHHT--EEEE-TTHHHHHHHTT------------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHT
T ss_pred             HHHHHhhcCCcEEEECCCCCCcCcccccCccccH--HHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCc
Confidence            9999999999999997642110    11111110  1112235789999999999975 569999999999998764322


Q ss_pred             ceecCCCcHHHHHHHHHHHHHHhhC-------c------HHHHHHHHHHHHHHHHhhc
Q psy15447        314 YCFSASLPPFLAVAANKALHLLKAN-------P------SLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       314 ~~~~~~~~~~~~aaa~a~l~~~~~~-------~------~~~~~l~~~~~~l~~~L~~  358 (457)
                      .  ..-..-...++..++|+.....       +      .-.+.++++++.+...|+.
T Consensus       240 R--alrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~  295 (367)
T PF03841_consen  240 R--ALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA  295 (367)
T ss_dssp             T--T-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred             c--eEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            1  1123667777777887765421       1      1224455566666666655

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG3846|consensus

Probab=98.93  E-value=6.4e-07  Score=81.29  Aligned_cols=337  Identities=15%  Similarity=0.126  Sum_probs=195.8

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC----C-CCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEeccc
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV----G-SCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFG  149 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~----~-~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG  149 (457)
                      .+.+..+-+++|+ +|+. .....+.+.+.+++|.-    + ..|-+.+....   +-.-..++.+.|..  ++-+.++=
T Consensus        63 ~~d~~~iYlcGNS-LGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~D---e~il~l~~~iVGA~e~EvavmNsL  137 (465)
T KOG3846|consen   63 SDDKPVIYLCGNS-LGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSID---EPILPLLAPIVGAQENEVAVMNSL  137 (465)
T ss_pred             CCCCCeEEEeccc-cccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecc---hhhhhhhhhhccCCchhhhhHhhh
Confidence            3567788888764 4775 45666777777777531    1 11111111112   22344566777754  33444554


Q ss_pred             HHHHHHHHHhhcCCCC---EEEEeCc----ccHHHHHHHHhcCCeEE----EecCC------CHHHHHHHHHhhchhccc
Q psy15447        150 FSTSASAIAAYVKRND---AVFVDEN----INFAIQTGLIASRCKVQ----YFKHN------NMQHLEELLRQQDERDTL  212 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd---~v~~~~~----~h~~~~~~~~~~g~~~~----~~~~~------d~~~le~~l~~~~~~~~~  212 (457)
                      +.-+...+-.+.+|..   .|+....    .|.++...+++.|..+.    .+...      ..+++-+.|+...     
T Consensus       138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng-----  212 (465)
T KOG3846|consen  138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG-----  212 (465)
T ss_pred             hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC-----
Confidence            4444444555655442   3444433    36777777788775431    11111      2344445555433     


Q ss_pred             CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-  291 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-  291 (457)
                         +.+++|...+++--||..-++.+|-+.-+..|+++=.|=+|++|-..-    ....     +++|+.+.+--|.+. 
T Consensus       213 ---DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL----~LHd-----WgVDFACWCSYKYlna  280 (465)
T KOG3846|consen  213 ---DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPL----QLHD-----WGVDFACWCSYKYLNA  280 (465)
T ss_pred             ---CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCce----EEee-----cCCceEEEeeeccccc
Confidence               678899999999999999999999977788899999999998875431    1112     455888888888772 


Q ss_pred             ---CcccEEEecHHHHHHHHh---------------------hCCcceecCCCcHHHH-HHHHHHHHHHhhC--cHHHHH
Q psy15447        292 ---SVGGFCVGSSYIIEHHRL---------------------SGSGYCFSASLPPFLA-VAANKALHLLKAN--PSLLTK  344 (457)
Q Consensus       292 ---~~gG~v~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~-aaa~a~l~~~~~~--~~~~~~  344 (457)
                         +.||..+-.+..-+....                     ......|..+.||+.. ++...+|+++.+-  ++++++
T Consensus       281 GaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkr  360 (465)
T KOG3846|consen  281 GAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKR  360 (465)
T ss_pred             CCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhh
Confidence               334555544322222110                     0011123333355544 4445678887654  233333


Q ss_pred             HHHHHHHHHHHhhccccc--------CCeEEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447        345 LREKCNTMHSLLSQHKVT--------QRFLVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH  412 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~--------~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~  412 (457)
                      ..-+..|+...++.....        +-+.+..+    ..+....+.+..+         ...+.++|-++|+.+.... 
T Consensus       361 S~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp---------~~~vfqeL~krGv~~DkR~-  430 (465)
T KOG3846|consen  361 SLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSP---------TPKVFQELHKRGVIGDKRR-  430 (465)
T ss_pred             hhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCC---------chHHHHHHHHcCeeccccC-
Confidence            333344444444331100        11223222    1244455555443         2478999999999875433 


Q ss_pred             CccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        413 LDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       413 ~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                              +|.+|++| ++.+|--|+-.++++|.+++..+.+
T Consensus       431 --------PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es  464 (465)
T KOG3846|consen  431 --------PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES  464 (465)
T ss_pred             --------CCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence                    58999997 8889999999999999999887764

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=98.80  E-value=2.5e-06  Score=79.96  Aligned_cols=309  Identities=15%  Similarity=0.154  Sum_probs=173.7

Q ss_pred             ChhhHHHHHHHHHhc-CCCC----CCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHH-HHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKN-GVGS----CGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFS-TSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~-~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~-a~~~ai~a~~~~gd~  166 (457)
                      +|++.+.+.+.+..+ |.+.    ...|.-. -...+.+.++.+.++++.+   +++|+.+|.. +..++...+...+..
T Consensus        17 p~~vL~~a~~e~~~~~g~g~svme~SHRsk~-~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~   95 (365)
T COG1932          17 PPEVLQQAQKELLDWNGLGMSVMEISHRSKE-FKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGT   95 (365)
T ss_pred             CHHHHHHHHHHHhhhccCCcceeeeccccHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCc
Confidence            477777777776654 2111    1122211 1456677888899999866   4566665554 444444444444332


Q ss_pred             EEEeCcccH--HHHHHHHhcC-CeE-----EEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        167 VFVDENINF--AIQTGLIASR-CKV-----QYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       167 v~~~~~~h~--~~~~~~~~~g-~~~-----~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      -.++..++.  +.-.+-.+.. ..+     ...++.   +++.++  +.           ++.+.|...+-...+|...|
T Consensus        96 ~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-----------~~~ayv~~~~NeTi~Gv~v~  162 (365)
T COG1932          96 DYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-----------DNDAYVHFCWNETISGVEVP  162 (365)
T ss_pred             eeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cC-----------CCccEEEEecCCcccceEcc
Confidence            022222222  2222222222 111     111111   222221  11           22344555554444566554


Q ss_pred             -hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhC--
Q psy15447        236 -LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSG--  311 (457)
Q Consensus       236 -l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~--  311 (457)
                       .+.+   ..  +.++++|-+-.++  ++         .++-.+.|++..+..|.+|+.| +.++.++++++......  
T Consensus       163 ~~p~~---~~--~~~~v~D~SS~il--sr---------~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P  226 (365)
T COG1932         163 ELPDI---GS--DGLLVADASSAIL--SR---------PIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLP  226 (365)
T ss_pred             CCCCC---CC--CceEEEecccHHh--cC---------CCChhHcceEEEehhhccCccceEEEEEcHHHHhcccccCCc
Confidence             2221   11  1789999875442  21         2333566889999999999877 67888998888774421  


Q ss_pred             ----------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-CCeEE
Q psy15447        312 ----------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-TPLKY  377 (457)
Q Consensus       312 ----------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~  377 (457)
                                ...+|.+ +|.++......+++.+++.   +.+.++-+++.+.|.+.+++.....+. +..... ...++
T Consensus       227 ~if~y~~~~~~~s~yNT-Pptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~-v~~~~RS~mnV~  304 (365)
T COG1932         227 SIFDYLTHADNGSMYNT-PPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNL-VAKANRSRMNVT  304 (365)
T ss_pred             hHhhchhhhccCCccCC-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccc-cchhhccceeEE
Confidence                      1112221 2334444555667777765   567788889999999999882211111 111112 23455


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.+.++.       ....+.+++.++|+..-.++       ...+.+|+++..++.-++++.+++.++.+.++
T Consensus       305 f~~~~~~-------ld~~fv~eae~~gl~~lkGh-------r~vgGmRasiynA~~~e~veaL~~fm~~f~~~  363 (365)
T COG1932         305 FTLVDAE-------LDKGFVAEAEAAGLIYLKGH-------RSVGGLRASIYNAVPLEDVEALTDFMDWFEET  363 (365)
T ss_pred             EEcCcHH-------HHHHHHHHHHHcCCceeccc-------cCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence            6666543       55678888888887665543       12345999999999999999999999988664

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.72  E-value=1.6e-06  Score=78.57  Aligned_cols=169  Identities=18%  Similarity=0.200  Sum_probs=107.4

Q ss_pred             CcccChHH-HHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeCcc-cHHHHHHHHhcC--------
Q psy15447        119 GFYGTNVV-HLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDENI-NFAIQTGLIASR--------  185 (457)
Q Consensus       119 ~~~g~~~~-~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~~~-h~~~~~~~~~~g--------  185 (457)
                      ..||..+. +.-|++-.|+.+|.+.+++   +-||++|+..|+-...+|||.++.--+. |.....-+-+.|        
T Consensus        58 tGYGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~d  137 (416)
T COG4100          58 TGYGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKD  137 (416)
T ss_pred             CCCCccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHH
Confidence            34555554 4558899999999998754   5799999999999999999987654333 333222221111        


Q ss_pred             --CeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC----CCCCCCChHHHHHHHHHc--CcEEEE
Q psy15447        186 --CKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM----NSADICPLKDILSLRSKY--QARIFV  252 (457)
Q Consensus       186 --~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~----~~G~i~~l~~i~~l~~~~--g~~li~  252 (457)
                        ..-..++     ..|.+.+...+.           +++++|.+.-..+    |+=.+..++++.++.++-  ++++.+
T Consensus       138 fgi~Y~~v~Lt~~gkiD~~~v~~~i~-----------~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFV  206 (416)
T COG4100         138 FGIKYKAVPLTADGKIDIQAVKTAIS-----------DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFV  206 (416)
T ss_pred             hCcceeecccccCCcccHHHHHHhcC-----------ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEE
Confidence              1111222     126677777664           3567776653221    111122355666666654  789999


Q ss_pred             EcCcccccccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHH
Q psy15447        253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHH  307 (457)
Q Consensus       253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~  307 (457)
                      |.+|+..+-         ...-..-++|++.+|+-|.-|+    .|||++|++++++.-
T Consensus       207 DNCYGEFvE---------~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~  256 (416)
T COG4100         207 DNCYGEFVE---------EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA  256 (416)
T ss_pred             eccchhhhh---------ccCccccchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence            999875431         1111113568999999999864    589999999998865

>KOG0628|consensus

Probab=98.71  E-value=3.4e-05  Score=74.20  Aligned_cols=280  Identities=12%  Similarity=0.111  Sum_probs=163.1

Q ss_pred             EEEecccHHHHHHHHHhhc-------CCC-----------C-EEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHH
Q psy15447        143 TALYSFGFSTSASAIAAYV-------KRN-----------D-AVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQH  198 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~-------~~g-----------d-~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~  198 (457)
                      .++..|+++++..++.+..       +.+           + ++..++..|.++.++..+.+.+.+.++..     +.+.
T Consensus       142 GviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~  221 (511)
T KOG0628|consen  142 GVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDT  221 (511)
T ss_pred             ceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHH
Confidence            4677788888776664321       111           2 34457778999999999999887766643     5788


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCC-CCCCCCChHHHHHHHHHcCcEEEEEcCccccccc-CCCCccccccCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYM-NSADICPLKDILSLRSKYQARIFVDESVSFGTLG-STGHGVTEYFGVST  276 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~-~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g-~~g~~~~~~~~~~~  276 (457)
                      |+++|++..+.      +-+-++++-++-. .+-...++.+|..+|+++|+||++|.+|+...+. +-.+++  .-|+  
T Consensus       222 L~~AIe~D~ar------GlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l--~rGi--  291 (511)
T KOG0628|consen  222 LRKAIEEDIAR------GLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYL--MRGI--  291 (511)
T ss_pred             HHHHHHHHHhC------CCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHH--hhcc--
Confidence            99888875431      2333444443332 2234467999999999999999999999754332 111111  1234  


Q ss_pred             CCccEEEecCcccccC----cc-----c-----EEEecHHHHHHHHhh-CCcceecC-----CCcHHHHHHHHHHHHHHh
Q psy15447        277 EEVDMIIGSLEHALGS----VG-----G-----FCVGSSYIIEHHRLS-GSGYCFSA-----SLPPFLAVAANKALHLLK  336 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~----~g-----G-----~v~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~aaa~a~l~~~~  336 (457)
                      +.+|-+-...||++-.    ..     |     +.-.++...++-... ...|.+-.     ..-.+-.+..   ++.+.
T Consensus       292 e~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv---~R~~G  368 (511)
T KOG0628|consen  292 EYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFV---LRSYG  368 (511)
T ss_pred             hhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHH---HHHHh
Confidence            3456666677888731    11     2     111222222222111 11111100     0111111111   22222


Q ss_pred             hCcHHHHHHH---HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcC-eeEecccc
Q psy15447        337 ANPSLLTKLR---EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG-FAITCPSH  412 (457)
Q Consensus       337 ~~~~~~~~l~---~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G-i~v~~~~~  412 (457)
                      - +.++++++   ++++.|.+.+.+   .+.+++..+..-.++.+++++..      ....++.+++...| |.+.+.. 
T Consensus       369 v-e~lq~~iR~h~~La~~fe~lv~~---d~~FE~~~~~~lgLvcFRlk~~N------~~ne~Ll~~in~~g~i~l~~~~-  437 (511)
T KOG0628|consen  369 V-ENLQNYIREHVRLAKEFETLVRA---DPRFEIVNKRILGLVCFRLKGDN------EINEALLNRLNSSGRIHLVPAS-  437 (511)
T ss_pred             H-HHHHHHHHHHHHHHHHHHHHhhc---CCcceeecccccceeEEeecCCc------HHHHHHHHHHHhcCcEEEEEee-
Confidence            1 22334433   456677776666   57788876655667778877653      25667888888774 6666554 


Q ss_pred             CccccCCCCCeEEEEecCCC-CHHHHHHHHHHHHHHHHHh
Q psy15447        413 LDQEAKKQKPSIRITCNISH-TEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       413 ~~~~~~~~~~~lRi~~~~~~-t~edi~~~~~~l~~~~~~~  451 (457)
                           ..+.-.+|++++... +++|+++.-+.|.+..+.+
T Consensus       438 -----l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l  472 (511)
T KOG0628|consen  438 -----LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL  472 (511)
T ss_pred             -----ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence                 234557999986554 5688999999998887764

>KOG1412|consensus

Probab=98.25  E-value=9.1e-05  Score=67.77  Aligned_cols=271  Identities=13%  Similarity=0.063  Sum_probs=144.3

Q ss_pred             EecccHHHHHHHH---HhhcCCCCEEEEeCcccHHHHHHHHhcC-CeEEEecCC-------CHHHHHHHHHhhchhcccC
Q psy15447        145 LYSFGFSTSASAI---AAYVKRNDAVFVDENINFAIQTGLIASR-CKVQYFKHN-------NMQHLEELLRQQDERDTLN  213 (457)
Q Consensus       145 ~~~sG~~a~~~ai---~a~~~~gd~v~~~~~~h~~~~~~~~~~g-~~~~~~~~~-------d~~~le~~l~~~~~~~~~~  213 (457)
                      -.-||+.|+..+-   ..++. ...|.++.+.+.....-+.-.| .++..+++-       |.+.+-..|+..       
T Consensus       104 QslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-------  175 (410)
T KOG1412|consen  104 QSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA-------  175 (410)
T ss_pred             eeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC-------
Confidence            3457777766553   23344 4458888888776666666666 344444432       445444444432       


Q ss_pred             CCCccEEEEEec-CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcc
Q psy15447        214 SKVTKKFIIVEG-VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEH  288 (457)
Q Consensus       214 ~~~~~~~vi~e~-v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK  288 (457)
                        +...++++.. -+||||.-+.   ..+|.+..++.+.+-++|-+|-...-|...+-. +-.+.++....-++..||+|
T Consensus       176 --Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaK  253 (410)
T KOG1412|consen  176 --PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAK  253 (410)
T ss_pred             --CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhh
Confidence              2233444444 4788886544   668888889999999999987554455433211 11111221111377899999


Q ss_pred             cccCcc---c---EEEecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHH---HHhhC----cHHHHHHHHHHHHH
Q psy15447        289 ALGSVG---G---FCVGSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALH---LLKAN----PSLLTKLREKCNTM  352 (457)
Q Consensus       289 ~lg~~g---G---~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~---~~~~~----~~~~~~l~~~~~~l  352 (457)
                      .+|.-+   |   +++.++..+..+....   ....++ ++|.+.+-...+.|.   +.++.    ..+-.|+.+.+..|
T Consensus       254 NfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aL  332 (410)
T KOG1412|consen  254 NFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTAL  332 (410)
T ss_pred             hcccccccccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998643   3   4555555544432211   111233 234444333333332   11111    12234556666677


Q ss_pred             HHHhhcccccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecC
Q psy15447        353 HSLLSQHKVTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       353 ~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      ++.|.+++ -+| ++-. ..+..++...  +         ....-++.|.++ .|++...+             ||+++.
T Consensus       333 rd~L~aL~-TPGtWDHI-~~QiGMFSyT--G---------Ltp~qV~~li~~h~vyLl~~G-------------RInisG  386 (410)
T KOG1412|consen  333 RDHLVALK-TPGTWDHI-TQQIGMFSYT--G---------LTPAQVDHLIENHKVYLLSDG-------------RINISG  386 (410)
T ss_pred             HHHHHhcC-CCCcHHHH-Hhhccceeec--C---------CCHHHHHHHHHhceEEEecCC-------------cEeeec
Confidence            77766632 122 1111 0122333322  1         112345566654 78776533             455543


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        431 SHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                       .+...+|.+..+|+++.+.+..
T Consensus       387 -LN~~NveyVAkAIde~Vr~~~~  408 (410)
T KOG1412|consen  387 -LNMKNVEYVAKAIDETVRAIKS  408 (410)
T ss_pred             -cccccHHHHHHHHHHHHHhhcc
Confidence             5778899999999999887654

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=98.17  E-value=0.00013  Score=68.32  Aligned_cols=276  Identities=12%  Similarity=0.183  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHhh---cC----CCcEEEecccH-HHHHHHHHhhcCC------CCEEEEeCcccHHHHHHHHhcCCeEEEe
Q psy15447        126 VHLDLENDIASF---MG----LEETALYSFGF-STSASAIAAYVKR------NDAVFVDENINFAIQTGLIASRCKVQYF  191 (457)
Q Consensus       126 ~~~~l~~~la~~---~g----~~~~i~~~sG~-~a~~~ai~a~~~~------gd~v~~~~~~h~~~~~~~~~~g~~~~~~  191 (457)
                      ...+|++.+.++   .|    .++-|++.+|+ +-+.+|+-++...      --.|+...|+|..+.............+
T Consensus        44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w  123 (363)
T PF04864_consen   44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW  123 (363)
T ss_dssp             S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred             ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence            345555555554   34    23567777776 5556666665422      2368888888888776544443333333


Q ss_pred             cCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc
Q psy15447        192 KHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY  271 (457)
Q Consensus       192 ~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~  271 (457)
                      ..+ .....   ...        ....-+=++.+++||.|.+-.     .+++.-+..+|.|=||-+.-+-+    +.. 
T Consensus       124 ~Gd-a~~~~---~~~--------~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTp----I~~-  181 (363)
T PF04864_consen  124 AGD-ASNFK---NSD--------NPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTP----ITA-  181 (363)
T ss_dssp             EEE-CCCGT---T-S---------CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-------S-
T ss_pred             ccc-HHhhc---cCC--------CCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccc----cCC-
Confidence            221 11111   110        123345456778889887621     12344566789999976543321    111 


Q ss_pred             cCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-Cc------H
Q psy15447        272 FGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NP------S  340 (457)
Q Consensus       272 ~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~------~  340 (457)
                          |.+-||++.|+||.-|..|   ||.+ -.+++...+...-.-.+.+  .+-=..-.++..|+.+-+ ..      .
T Consensus       182 ----~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiG--vS~dsQLRa~kiLk~v~~~~~~~~~~~~  255 (363)
T PF04864_consen  182 ----PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIG--VSRDSQLRALKILKVVLDGYGTEKGTED  255 (363)
T ss_dssp             -----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS----HHHHHHHHHHHHHHHHHCCHHTTTTS
T ss_pred             ----CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhccc--CcHHHHHHHHHHHHHHHhcccCCCCccc
Confidence                3445899999999998666   7754 4555655554321111111  122222222222322211 10      1


Q ss_pred             H----HHHHHHHHHHHHHHhhcccccCCeEEec-------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447        341 L----LTKLREKCNTMHSLLSQHKVTQRFLVQG-------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA  403 (457)
Q Consensus       341 ~----~~~l~~~~~~l~~~L~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  403 (457)
                      +    ++.++++-+.|++.++..   .-+.+..             .+...+.|+++..+.+        .+....|++.
T Consensus       256 ~F~f~~~~M~~RW~~L~~~~~~S---~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------~DC~~~l~~~  324 (363)
T PF04864_consen  256 IFHFGYSTMRERWEKLRAAVSAS---KRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------EDCYAVLREA  324 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCS---SSEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------SSHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhc---CceecCcCCchhccccccccCCCCCeEEEecCCccc--------ccHHHHHHhC
Confidence            2    346777778888887762   2233321             1235678888876531        2455667778


Q ss_pred             CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ||+-+.+..+    .....++|++.-  .++++.|.+++.|..
T Consensus       325 ~I~tr~G~~f----ga~~ryVRlSml--~~~d~Fd~l~~rL~~  361 (363)
T PF04864_consen  325 KIITRSGVLF----GADSRYVRLSML--KRDDDFDQLLERLSK  361 (363)
T ss_dssp             TEEEEEGGGG----TS-TTEEEEESS--S-HHHHHHHHHHHHC
T ss_pred             CcccCCCCcc----CCCCCeEEEecc--CCHHHHHHHHHHHHh
Confidence            9998877653    334679999864  689999999999865

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG2040|consensus

Probab=97.96  E-value=0.002  Score=64.75  Aligned_cols=312  Identities=13%  Similarity=0.113  Sum_probs=167.8

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCC----CCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVG----SCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~----~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      .|.+-+|.+..-.+.|.   ++.++..++.    +.-+...+|..+........++++.|.+  .+-+..-|+.|.++..
T Consensus       121 sfIGmGYyn~~vP~~I~---RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~  197 (1001)
T KOG2040|consen  121 SFIGMGYYNTHVPAVIL---RNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMA  197 (1001)
T ss_pred             HhhccccccccCcHHHH---HHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHH
Confidence            35555565554223332   3344443432    2222233455555566677788888855  4556667776655443


Q ss_pred             Hhh-cCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        158 AAY-VKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       158 ~a~-~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      .+. ..+++.++++..+|+.+...++-.  +..+. +...|+++.....            +.+.-+++.-+. ..|.+.
T Consensus       198 l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~~~~~~~~~s~------------~~v~gvlvQYP~-t~G~i~  263 (1001)
T KOG2040|consen  198 LCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVVSDIKEADYSS------------KDVSGVLVQYPD-TEGSVL  263 (1001)
T ss_pred             HHHhhcccceEEecCCCCcchhhhhhcccccccee-EEecCHHHhhccc------------cceeEEEEEcCC-CCCccc
Confidence            332 344555889999999988765422  22222 2223444332211            344556665544 469999


Q ss_pred             ChHHHHHHHHHcCcEEEEEc-CcccccccCCCCccccccCCCCCCccEEEecCccccc----Ccc---cEEEecHHHHHH
Q psy15447        235 PLKDILSLRSKYQARIFVDE-SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG----SVG---GFCVGSSYIIEH  306 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DE-a~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg----~~g---G~v~~~~~~~~~  306 (457)
                      +..++.+++++.|.++++-- -.+.-.+-+.|     .||     +||.+||- .-||    ..|   ||.+.++.+...
T Consensus       264 d~~el~~~a~~~~s~vv~atDLLaLtiLrpPg-----efG-----aDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~  332 (1001)
T KOG2040|consen  264 DFDELVELAHANGSLVVMATDLLALTILRPPG-----EFG-----ADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRM  332 (1001)
T ss_pred             CHHHHHHHhhccCceEEEeehhhHHHccCChh-----hcC-----ceeeeccc-cccCccccCCCchHHHHHHHHHHHhh
Confidence            99999999999998766542 22222232211     344     37888764 3333    222   444444443332


Q ss_pred             HHhh----------------------CCcceecCCCcHHHHHHHHHHHHHH---hhCc----HHHHHHHHHHHHHHHHhh
Q psy15447        307 HRLS----------------------GSGYCFSASLPPFLAVAANKALHLL---KANP----SLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       307 ~~~~----------------------~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~----~~~~~l~~~~~~l~~~L~  357 (457)
                      +.-.                      .+--.--.+.|-..+.|.++.+.-+   =..+    ++..++......|...|+
T Consensus       333 mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~  412 (1001)
T KOG2040|consen  333 MPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLK  412 (1001)
T ss_pred             CCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            2000                      0000001122333334444433222   1122    334455555667777777


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      .    .|.++....-.-.+.+.++.         ...++.++..+++|-++-..         .+.+-+++--+.+++|+
T Consensus       413 ~----aghel~~k~fFDTLkI~~~~---------s~~~~l~rA~~~~iNlr~~e---------d~tigvslDETv~~~Dv  470 (1001)
T KOG2040|consen  413 N----AGHELQHKPFFDTLKIRCGC---------SAEEVLDRAAKRQINLRLVE---------DGTIGVSLDETVTEKDV  470 (1001)
T ss_pred             h----cchhhccccccceEEEEecC---------cHHHHHHHHHhhcCceEEee---------cCceEEeecccccHHHH
Confidence            6    56655432222334455554         24567778888887766433         57888999999999999


Q ss_pred             HHHHHHHH
Q psy15447        438 NSLIETLC  445 (457)
Q Consensus       438 ~~~~~~l~  445 (457)
                      |.++..+.
T Consensus       471 ddLl~vf~  478 (1001)
T KOG2040|consen  471 DDLLWVFN  478 (1001)
T ss_pred             HHHHHHHc
Confidence            99999885

>KOG3843|consensus

Probab=97.77  E-value=0.00083  Score=60.20  Aligned_cols=300  Identities=13%  Similarity=0.181  Sum_probs=150.7

Q ss_pred             HHHHHHHHhhcC---CCcEEEec--ccHHHHHHHHHhhcC---CCCEEEEeCcccHHHHHHHHhcCCeEEEecC------
Q psy15447        128 LDLENDIASFMG---LEETALYS--FGFSTSASAIAAYVK---RNDAVFVDENINFAIQTGLIASRCKVQYFKH------  193 (457)
Q Consensus       128 ~~l~~~la~~~g---~~~~i~~~--sG~~a~~~ai~a~~~---~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------  193 (457)
                      .++......+.|   +..++++.  +|.+- ...+..+.+   +-+.|+..+-..-+-++.+-..|.+.+.+..      
T Consensus        60 ne~a~~~i~l~glhav~nc~vvpl~tgmsl-slc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~  138 (432)
T KOG3843|consen   60 NEFAKDAIHLAGLHAVANCFVVPLATGMSL-SLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDE  138 (432)
T ss_pred             HHHHHHHHHHhhhhhhhceeEEeccccccH-HHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchH
Confidence            344444444555   44566554  44432 233333432   2346666666666666666666766554432      


Q ss_pred             --CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC-----hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447        194 --NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP-----LKDILSLRSKYQARIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       194 --~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~-----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~  266 (457)
                        .|++.+++.+++..+       +-+.+|..     .+.+..|     +++|..+|..|++.-|+..+|+.-.- +.-+
T Consensus       139 l~tdleav~~~iee~g~-------dcilci~s-----ttscfapr~pd~leaiaaica~~diphivnnayglqse-e~i~  205 (432)
T KOG3843|consen  139 LITDLEAVEAIIEELGE-------DCILCIHS-----TTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE-ECIH  205 (432)
T ss_pred             HHHhHHHHHHHHHHhCC-------ceEEEEee-----cccccCCCCCchHHHHHHHHHccCchhhhccccccchH-HHHH
Confidence              268888888887652       22222222     2222322     89999999999999999999764210 0000


Q ss_pred             ccccccCCCCCCccEEEecCccccc-CcccEEEe--cHHHHHHHHhhCCcceecCCCcHHHHH-----HHHHH-HHHHhh
Q psy15447        267 GVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVG--SSYIIEHHRLSGSGYCFSASLPPFLAV-----AANKA-LHLLKA  337 (457)
Q Consensus       267 ~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a-----aa~a~-l~~~~~  337 (457)
                      -...  +..-.++|.++.|+-|.|- +.||+++.  ++..+..+.+.-.+. -+.+ |..-..     .+..+ .+.+.+
T Consensus       206 ~iaa--~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgr-asa~-ps~dllitll~~gqn~f~e~~~e  281 (432)
T KOG3843|consen  206 KIAA--AAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGR-ASAS-PSLDLLITLLSLGQNAFKELFGE  281 (432)
T ss_pred             HHHH--HhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCCc-cccC-ccHHHHHHHHHhchhHHHHHHHH
Confidence            1111  1112356778889999995 45666533  444555443322221 1111 221111     11111 233334


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCee---EeccccCc
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFA---ITCPSHLD  414 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~---v~~~~~~~  414 (457)
                      ..+++-+++.+...|.+.+.+    .-++.+..+.+.-..+..-++    ...+....+...|..+||-   +.+.+...
T Consensus       282 qkemf~~l~~ki~~~ae~~~e----~l~~~p~n~is~amtl~ti~~----~k~kavt~~gsilfak~isgarvv~~~q~k  353 (432)
T KOG3843|consen  282 QKEMFLKLRNKIIKFAEAIGE----CLLETPENEISLAMTLKTIDE----AKDKAVTLFGSILFAKGISGARVVPLGQMK  353 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHhhh----hhhcCCCchhhhhhhhccCCh----HHhhHHHHHHHHHHhccccCceEeeccccc
Confidence            444555555555555555444    111221111111111111111    1111233455667777653   33322111


Q ss_pred             c-------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        415 Q-------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       415 ~-------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .             .......++-+.....+++.|+|.+++.|...++.++.
T Consensus       354 ttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~k  405 (432)
T KOG3843|consen  354 TTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRK  405 (432)
T ss_pred             eeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHH
Confidence            0             00112346777777888999999999999888776643

>KOG1411|consensus

Probab=97.55  E-value=0.002  Score=60.16  Aligned_cols=259  Identities=11%  Similarity=0.066  Sum_probs=135.3

Q ss_pred             ccHHHHH--HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH----HHHHHHHhhchhcccCCCCccEEE
Q psy15447        148 FGFSTSA--SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ----HLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       148 sG~~a~~--~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~----~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      ||+.|+-  +.+.+-.-++..|.++.+.++.........|..+..+++-|++    +++..++....    .| +. .+|
T Consensus       128 SGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~----~p-~g-s~i  201 (427)
T KOG1411|consen  128 SGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGE----AP-EG-SII  201 (427)
T ss_pred             cCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhc----CC-CC-cEE
Confidence            5665533  3333334457889999999888777788888888777655433    23333333321    11 22 233


Q ss_pred             EEe-cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-----ccccCCCCCCccEEEecCcccccC
Q psy15447        222 IVE-GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-----TEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       222 i~e-~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-----~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      ++- --+||||.-+.   .++|+++-++.+.+-++|-+|-....|.--+-.     +...|.   + -.+..|++|.+|.
T Consensus       202 lLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~---~-~~laQSyAKNMGL  277 (427)
T KOG1411|consen  202 LLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGH---E-ILLAQSYAKNMGL  277 (427)
T ss_pred             EeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCC---c-eEeehhhhhhcch
Confidence            333 35578886554   678999999999999999987544444322111     011122   1 2567899999986


Q ss_pred             cc---cE---EEecHHHHHHH----HhhCCcceecCCCcHHHHHHHHHH-H---HHHh----hCcHHHHHHHHHHHHHHH
Q psy15447        293 VG---GF---CVGSSYIIEHH----RLSGSGYCFSASLPPFLAVAANKA-L---HLLK----ANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       293 ~g---G~---v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~aaa~a~-l---~~~~----~~~~~~~~l~~~~~~l~~  354 (457)
                      -|   |.   ++.+.+....+    +...++ .|+.  ||+--|...+. |   ++..    +...+.+++...+..+.+
T Consensus       278 YgERvGa~svvc~~ad~A~rV~SQlk~liRp-mYSn--PP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d  354 (427)
T KOG1411|consen  278 YGERVGALSVVCKDADEAKRVESQLKILIRP-MYSN--PPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFD  354 (427)
T ss_pred             hhhccceeEEEecCHHHHHHHHHHHHHHhcc-cccC--CCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhH
Confidence            44   32   34444433322    222222 4543  44332222222 1   1111    112344555556666666


Q ss_pred             HhhcccccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecC
Q psy15447        355 LLSQHKVTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      .|.+    .|-.....   .+-.++++.--.+           +-.+.|. +.-|+++..             -||+...
T Consensus       355 ~L~~----~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT~d-------------GRiS~aG  406 (427)
T KOG1411|consen  355 ALEK----EGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLTKD-------------GRISMAG  406 (427)
T ss_pred             Hhhc----CCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeeccC-------------ceEeecc
Confidence            6665    33221000   1122333321111           2334444 457877632             3666643


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q psy15447        431 SHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~  448 (457)
                       .+...++++.++|..+-
T Consensus       407 -~ss~nV~yLa~aih~vt  423 (427)
T KOG1411|consen  407 -LSSSNVPYLADAIHAVT  423 (427)
T ss_pred             -ccccCCcccchhhHhHh
Confidence             56777888888877654

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=95.31  E-value=0.043  Score=46.46  Aligned_cols=55  Identities=15%  Similarity=0.085  Sum_probs=43.2

Q ss_pred             ccChHHHHHHHHHHHhhcC--C----CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccH
Q psy15447        121 YGTNVVHLDLENDIASFMG--L----EETALYSFGFSTSASAIAAYVKRNDAVFVDENINF  175 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g--~----~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~  175 (457)
                      .|..++++.+++.+.+..|  .    +++++++++++|+..++.+++++||.|++..++|.
T Consensus        92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~  152 (153)
T PLN02994         92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA  152 (153)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence            4567777888888877666  2    34566666678999999999999999999999875

>KOG2790|consensus

Probab=95.28  E-value=2.4  Score=39.12  Aligned_cols=319  Identities=13%  Similarity=0.086  Sum_probs=160.0

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a  152 (457)
                      ++++||+.+-. -+ +++-+.++-.+.+.-.|.+-+    ..|.-. -...+.+.+..+.+++..+   +++|..+|...
T Consensus         6 ~~vvnFaaGPA-kl-p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~-f~kii~~tes~lreLlniPdn~~vlf~QGGGt~   82 (370)
T KOG2790|consen    6 ERVVNFAAGPA-KL-PESVLLEAQKDLLNFNGSGISVMEMSHRSKD-FAKIINDTESLLRELLNIPDNYKVLFLQGGGTG   82 (370)
T ss_pred             cceeecCCCcc-cC-CHHHHHHHHHHhhccCCCcceEEEecccchh-HHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence            57888876311 22 345555665555543332211    111111 1345566677777777755   35666554443


Q ss_pred             HHHHHHh-hc--CCC---CEEEEeCcccHHHHHHHHhcCCeEEEec--------CCCHHHHHHHHHhhchhcccCCCCcc
Q psy15447        153 SASAIAA-YV--KRN---DAVFVDENINFAIQTGLIASRCKVQYFK--------HNNMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       153 ~~~ai~a-~~--~~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~--------~~d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      -.+|++. ++  +.|   |.|+.-.-.--+.-.+-+......+..+        -+|++.++.-.            +..
T Consensus        83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~------------da~  150 (370)
T KOG2790|consen   83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP------------DAS  150 (370)
T ss_pred             cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccCC------------Ccc
Confidence            3333322 22  334   3444322222223333333333222221        23555554321            112


Q ss_pred             EEEEE--ecCCCCCCCCC-ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447        219 KFIIV--EGVYMNSADIC-PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       219 ~~vi~--e~v~~~~G~i~-~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      -+.++  |+++   |.-- +++    +-.-+|..++.|-+.-|  +.+       ..++  .+.+++.....|.+|+.| 
T Consensus       151 yvyyCaNETVH---GVEf~~~P----~~~~~~~vlVaDmSSnf--lSr-------pvDv--sk~gvi~aGAQKN~G~aG~  212 (370)
T KOG2790|consen  151 YVYYCANETVH---GVEFDFIP----VNDPKGAVLVADMSSNF--LSR-------PVDV--SKFGVIFAGAQKNVGPAGV  212 (370)
T ss_pred             EEEEecCceee---ceecCCCC----CCCCCCceEEEecccch--hcC-------Cccc--hhcceEEeccccccCcccc
Confidence            23333  3343   3221 122    22346889999976443  221       2333  234566778899998766 


Q ss_pred             cEEEecHHHHHHHHhhCC-----------cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhccc
Q psy15447        295 GFCVGSSYIIEHHRLSGS-----------GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      -.++.+++++........           ...|. ++|.....+.--.++.+.+.   ..+.+...++.+.+.+.+.+  
T Consensus       213 Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyN-TpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~--  289 (370)
T KOG2790|consen  213 TVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYN-TPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDN--  289 (370)
T ss_pred             EEEEEehhhhcccccCCccccceeeecccccccc-CCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh--
Confidence            234556666544321110           01111 22333333333456665544   23344555778889999987  


Q ss_pred             ccCCeEEe-ccC--C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        361 VTQRFLVQ-GHR--D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       361 ~~~~~~~~-~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                       ..|+-.. .++  . -..++++++++.       .-.++.++..+++..-..+ +      ..-+.+|-++-..+|-++
T Consensus       290 -s~gfy~cpVe~~~RS~MNV~Fri~~d~-------Le~eFLkeA~~~~mv~LKG-h------RSVGGiRASlYNAisv~~  354 (370)
T KOG2790|consen  290 -SNGFYRCPVEPSVRSRMNVPFRIEKDE-------LEAEFLKEAAKEHMVQLKG-H------RSVGGIRASLYNAISVEE  354 (370)
T ss_pred             -cCCeEEcccchhhhhhcccceeecchH-------HHHHHHHHHHHhhhhcccc-c------cccccchhhhhccccHHH
Confidence             3454332 111  1 234566777553       4445666666666432222 2      123679999999999999


Q ss_pred             HHHHHHHHHHHHH
Q psy15447        437 MNSLIETLCKSHD  449 (457)
Q Consensus       437 i~~~~~~l~~~~~  449 (457)
                      ++++++-++++.+
T Consensus       355 ~q~L~~~m~~F~k  367 (370)
T KOG2790|consen  355 VQKLAAFMKEFQK  367 (370)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	457
3a2b_A	398	Crystal Structure Of Serine Palmitoyltransferase Fr		3e-34
2x8u_A	412	Sphingomonas Wittichii Serine Palmitoyltransferase		2e-31
2w8t_A	427	Spt With Plp, N100c Length = 427		2e-31
3tqx_A	399	Structure Of The 2-Amino-3-Ketobutyrate Coenzyme A		1e-30
2w8v_A	427	Spt With Plp, N100w Length = 427		3e-30
2w8w_A	427	N100y Spt With Plp-Ser Length = 427		4e-30
2jgt_A	422	Low Resolution Structure Of Spt Length = 422		4e-30
2w8j_A	427	Spt With Plp-Ser Length = 427		4e-30
2w8u_A	427	Spt With Plp, N100y Length = 427		5e-30
2jg2_A	422	High Resolution Structure Of Spt With Plp Internal		5e-30
1fc4_A	401	2-Amino-3-Ketobutyrate Coa Ligase Length = 401		8e-25
2bwo_B	401	5-Aminolevulinate Synthase From Rhodobacter Capsula		7e-21
2bwn_A	401	5-Aminolevulinate Synthase From Rhodobacter Capsula		9e-21
4iw7_A	399	Crystal Structure Of 8-amino-7-oxononanoate Synthas		1e-19
1bs0_A	384	Plp-dependent Acyl-coa Synthase Length = 384		1e-15
1dj9_A	384	Crystal Structure Of 8-Amino-7-Oxonanoate Synthase		1e-15
3hqt_A	409	Plp-Dependent Acyl-Coa Transferase Cqsa Length = 40		7e-11
2wk8_A	389	Structure Of Holo Form Of Vibrio Cholerae Cqsa Leng		7e-11
2wk7_A	393	Structure Of Apo Form Of Vibrio Cholerae Cqsa Lengt		7e-11

>pdb|3A2B|A Chain A, Crystal Structure Of Serine Palmitoyltransferase From Sphingobacterium Multivorum With Substrate L-Serine Length = 398

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 22/372 (5%)
Query: 75  VNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI 134
           V I+G   + F +++YL    +  I K A D ++K G G  G R   GT  +H++LE  +
Sbjct: 38  VKIDGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKL 97
Query: 135 ASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN 194
           ++++G E   L+S GF ++   ++  + RND + +DE  + +I  G   S  KV  + HN
Sbjct: 98  SAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHN 157
Query: 195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDE 254
           NM+ L   L +  E        + K I  +G++    DI  L ++ S+ +++ A + VD+
Sbjct: 158 NMEDLRAKLSRLPED-------SAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDD 210
Query: 255 SVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGY 314
           + S G +G  G G   +FG++ ++VD+I+G+   +L S+GGF  G + +I+  + +    
Sbjct: 211 AHSLGVIGHKGAGTASHFGLN-DDVDLIMGTFSKSLASLGGFVAGDADVIDFLKHNARSV 269
Query: 315 CFSASLPPFXXXXXXXXXXXXXXXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP 374
            FSAS+ P                P  + KL +  +   + L  H         G  ++P
Sbjct: 270 MFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHGFD-----LGATESP 324
Query: 375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE 434
           +  ++++ ++      K+LQ    + +    +   P+        ++  IR +   +HT 
Sbjct: 325 ILPIFIRSNEKTFWVTKMLQD-DGVFVNPVVSPAVPA--------EESLIRFSLMATHTY 375
Query: 435 QDMNSLIETLCK 446
             ++  IE + K
Sbjct: 376 DQIDEAIEKMVK 387

>pdb|2X8U|A Chain A, Sphingomonas Wittichii Serine Palmitoyltransferase Length = 412

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 125/246 (50%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           ING   I   T+NY+    +PD+       +D+ G G+ G R   GT   H   E+ +  
Sbjct: 41  INGRKTILLGTYNYMGMTFDPDVIAAGKQALDEFGSGTTGSRVLNGTYQGHKACEDALKE 100
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G E   ++S G+  +   I+    + D + +D + + +I  G      ++  F+HN++
Sbjct: 101 FYGTEHAIVFSTGYQANLGMISTLAGKGDYIILDADSHASIYDGCWLGDAEIVRFRHNSV 160
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L++ L +             K +++EGVY    DI PL++++++  K+ A I VDE+ 
Sbjct: 161 EDLDKRLGRLPAE-------AGKLVVLEGVYSMMGDIAPLQEMVAVSKKHGAMILVDEAH 213
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
             G  G  G GV E  GV   +VD ++G+   ++G+VGGFCV +    E  RL    Y F
Sbjct: 214 GMGFFGEHGRGVFEEAGVEA-DVDFVVGTFSXSVGTVGGFCVSNHPKFEVLRLVCRPYVF 272
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 273 TASLPP 278

>pdb|2W8T|A Chain A, Spt With Plp, N100c Length = 427

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+CG R   GT   H+++E  +  
Sbjct: 61  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRD 120
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 121 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 180
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 181 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 233
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 234 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSXSVGTVGGFVVSNHPKFEAVRLACRPYIF 292
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 293 TASLPP 298

>pdb|3TQX|A Chain A, Structure Of The 2-Amino-3-Ketobutyrate Coenzyme A Ligase (Kbl) From Coxiella Burnetii Length = 399

Iteration: 1
 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 159/364 (43%), Gaps = 22/364 (6%)
Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142
           +NF  +NYL   ++P + K A   +++ G G    R   GT  +H +LE DI+ F+G ++
Sbjct: 46  LNFCANNYLGLADHPALIKTAQTVVEQYGFGXASVRFICGTQTIHKELEKDISEFLGTDD 105
Query: 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEEL 202
           T LYS  F  +       +   DA+  DE  + +I  G+   + +   +K+N    LE  
Sbjct: 106 TILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAXGDLEAK 165
Query: 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG 262
           L++ DE+         K I  +GV+     I  LK I  L  KY A + VD+S + G +G
Sbjct: 166 LKEADEKGA-----RFKLIATDGVFSXDGIIADLKSICDLADKYNALVXVDDSHAVGFIG 220
Query: 263 STGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEHHRLSGSGYCFSASLP 321
             G G  EY GV+ + VD++ G+L  ALG   GG+  G   IIE  R     Y FS ++ 
Sbjct: 221 ENGRGTPEYCGVA-DRVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLFSNTVA 279
Query: 322 P-FXXXXXXXXXXXXXXXPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL 380
           P                 P L  +L+E  N+ +      K+  + +   H   P+     
Sbjct: 280 PVIVATSLKVLELLKTEGPQLRKQLQE--NSRYFRAGXEKLGFQLVPGNHPIIPVX---- 333
Query: 381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL 440
                 +   +L     D  +Q G  +   S+        K  IR+  +  HT+Q ++  
Sbjct: 334 ------LGDAQLATNXADHLLQEGIYVVGFSY--PVVPXGKARIRVQXSAVHTQQQLDRA 385
Query: 441 IETL 444
           IE  
Sbjct: 386 IEAF 389

>pdb|2W8V|A Chain A, Spt With Plp, N100w Length = 427

Iteration: 1
 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 61  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTWGSRMLNGTFHDHMEVEQALRD 120
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 121 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 180
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 181 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 233
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 234 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSXSVGTVGGFVVSNHPKFEAVRLACRPYIF 292
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 293 TASLPP 298

>pdb|2W8W|A Chain A, N100y Spt With Plp-Ser Length = 427

Iteration: 1
 Score =  129 bits (324), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 61  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTYGSRMLNGTFHDHMEVEQALRD 120
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 121 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 180
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 181 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 233
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 234 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIF 292
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 293 TASLPP 298

>pdb|2JGT|A Chain A, Low Resolution Structure Of Spt Length = 422

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 62  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHDHMEVEQALRD 121
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 122 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 181
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 182 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 234
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 235 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIF 293
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 294 TASLPP 299

>pdb|2W8J|A Chain A, Spt With Plp-Ser Length = 427

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 61  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHDHMEVEQALRD 120
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 121 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 180
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 181 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 233
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 234 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIF 292
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 293 TASLPP 298

>pdb|2W8U|A Chain A, Spt With Plp, N100y Length = 427

Iteration: 1
 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 61  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTYGSRMLNGTFHDHMEVEQALRD 120
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 121 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 180
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 181 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 233
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 234 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSXSVGTVGGFVVSNHPKFEAVRLACRPYIF 292
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 293 TASLPP 298

>pdb|2JG2|A Chain A, High Resolution Structure Of Spt With Plp Internal Aldimine Length = 422

Iteration: 1
 Score =  129 bits (323), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)
Query: 77  INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIAS 136
           I G   I   T+NY+    +PD+     + ++K G G+ G R   GT   H+++E  +  
Sbjct: 62  IRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHDHMEVEQALRD 121
Query: 137 FMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM 196
           F G     ++S G+  +   I+    + + V +D + + +I  G      ++  F+HN++
Sbjct: 122 FYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSV 181
Query: 197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV 256
           + L       D+R     K   K +++EGVY    DI PLK+++++  K+ A + VDE+ 
Sbjct: 182 EDL-------DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAH 234
Query: 257 SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCF 316
           S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E  RL+   Y F
Sbjct: 235 SMGFFGPNGRGVYEAQGLEG-QIDFVVGTFSXSVGTVGGFVVSNHPKFEAVRLACRPYIF 293
Query: 317 SASLPP 322
           +ASLPP
Sbjct: 294 TASLPP 299

>pdb|1FC4|A Chain A, 2-Amino-3-Ketobutyrate Coa Ligase Length = 401

Iteration: 1
 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 74  IVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLEND 133
           I   +G   INF  +NYL    +PD+   A    D +G G    R   GT   H +LE  
Sbjct: 39  ITVADGSHVINFCANNYLGLANHPDLIAAAKAGXDSHGFGXASVRFICGTQDSHKELEQK 98
Query: 134 IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH 193
           +A+F+G E+  LYS  F  +       +   DA+  D   + +I  G+   + K   + +
Sbjct: 99  LAAFLGXEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN 158
Query: 194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVD 253
           N+ Q LE  L++  E     +      I  +GV+     I  LK +  L  KY A + VD
Sbjct: 159 NDXQELEARLKEARE-----AGARHVLIATDGVFSXDGVIANLKGVCDLADKYDALVXVD 213
Query: 254 ESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEHHRLSGS 312
           +S + G +G  G G  EY  V    VD+I G+L  ALG   GG+      ++E  R    
Sbjct: 214 DSHAVGFVGENGRGSHEYCDVXG-RVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSR 272
Query: 313 GYCFSASLPP 322
            Y FS SL P
Sbjct: 273 PYLFSNSLAP 282

>pdb|2BWO|B Chain B, 5-Aminolevulinate Synthase From Rhodobacter Capsulatus In Complex With Succinyl-Coa Length = 401

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 89  NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSF 148
           +YL   ++P +     + ++  G GS G R   GT   H  LE +IA     E   ++S 
Sbjct: 55  DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSS 114
Query: 149 GFSTSASAIAAY-VKRNDAVFVDENINFA-IQTGLIASRCKVQYFKHNNMQHLEELLRQQ 206
            ++ + + ++   V     +   +++N A +  G+  +    + F+HN++ HL EL+   
Sbjct: 115 AYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAAD 174
Query: 207 DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGH 266
           D           K I  E VY    D  P+K+I  +  ++ A  ++DE  + G  G  G 
Sbjct: 175 D-------PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGA 227
Query: 267 GVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPP 322
           GV E  G+    +D+  G+L  A G  GG+   S+ +++  R    G+ FS SLPP
Sbjct: 228 GVAERDGL-MHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPP 282

>pdb|2BWN|A Chain A, 5-Aminolevulinate Synthase From Rhodobacter Capsulatus Length = 401

Iteration: 1
 Score = 98.2 bits (243), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 89  NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSF 148
           +YL   ++P +     + ++  G GS G R   GT   H  LE +IA     E   ++S 
Sbjct: 55  DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSS 114
Query: 149 GFSTSASAIAAY-VKRNDAVFVDENINFA-IQTGLIASRCKVQYFKHNNMQHLEELLRQQ 206
            ++ + + ++   V     +   +++N A +  G+  +    + F+HN++ HL EL+   
Sbjct: 115 AYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAAD 174
Query: 207 DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGH 266
           D           K I  E VY    D  P+K+I  +  ++ A  ++DE  + G  G  G 
Sbjct: 175 D-------PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGA 227
Query: 267 GVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPP 322
           GV E  G+    +D+  G+L  A G  GG+   S+ +++  R    G+ FS SLPP
Sbjct: 228 GVAERDGL-MHRIDIFNGTLAXAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPP 282

>pdb|4IW7|A Chain A, Crystal Structure Of 8-amino-7-oxononanoate Synthase (biof) From Francisella Tularensis Length = 399

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 15/240 (6%)
Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE 142
           I+F T +YL+     +++   ++  DK G GS G     G        E++ A F+    
Sbjct: 54  IDFTTSDYLNLSSAHNLKHAIVNGFDKYGFGSKGSNIVCGYTDETQQFEHEFAKFINYPR 113
Query: 143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEEL 202
              +S GF  + +  +    ++D++F D+ I+ +I  G+  S+ K++ +KH  +  L+++
Sbjct: 114 AIFFSSGFMANLAIYSTLFSKHDSIFADKYIHASIIDGIKLSQAKLRRYKHQQLSQLQDI 173
Query: 203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG 262
                          K FI  EGV+  S  I  L  +  +  +   ++ VDE+ SFG LG
Sbjct: 174 YD------------GKSFITTEGVFSTSGSITQLDKLAKITPE---KLIVDEAHSFGVLG 218
Query: 263 STGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPP 322
             G G    F +S +   + +  L  A G VG     +  I E+       Y ++ +LPP
Sbjct: 219 KNGRGAINSFRISYKNCLICVFPLGKAFGGVGAVVCTTEAIAEYLIQFARNYIYTTALPP 278

>pdb|1BS0|A Chain A, Plp-dependent Acyl-coa Synthase Length = 384

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/389 (21%), Positives = 160/389 (41%), Gaps = 41/389 (10%)
Query: 65  YVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTN 124
           Y V Q +G  +  +    +NF++++YL    +P I +      ++ G+GS G     G +
Sbjct: 24  YPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYS 83
Query: 125 VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIAS 184
           VVH  LE ++A ++G     L+  GF+ + + IAA + + D +  D   + ++      S
Sbjct: 84  VVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLS 143
Query: 185 RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244
             +++ F HN++ HL  LL         +    ++ ++ EGV+    D  PL +I  +  
Sbjct: 144 PSQLRRFAHNDVTHLARLL--------ASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQ 195
Query: 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYII 304
           ++   + VD++   G +G  G G      V  E   +++ +     G  G   + SS + 
Sbjct: 196 QHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPE---LLVVTFGKGFGVSGAAVLCSSTVA 252
Query: 305 EHHRLSGSGYCFSASLPPFXXXXXXXXX---------XXXXXXPSLLTKLREKCNTMHSL 355
           ++         +S S+PP                          +L+T+ R     +   
Sbjct: 253 DYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFT 312
Query: 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ 415
           L+      + L+ G     L+            ++KL Q  C +      AI  P+    
Sbjct: 313 LADSCSAIQPLIVGDNSRALQL-----------AEKLRQQGCWVT-----AIRPPTVPAG 356
Query: 416 EAKKQKPSIRITCNISHTEQDMNSLIETL 444
            A+     +R+T   +H  QD++ L+E L
Sbjct: 357 TAR-----LRLTLTAAHEMQDIDRLLEVL 380

>pdb|1DJ9|A Chain A, Crystal Structure Of 8-Amino-7-Oxonanoate Synthase (Or 7-Keto- 8aminipelargonate Or Kapa Synthase) Complexed With Plp And The Product 8(S)-Amino-7-Oxonanonoate (Or Kapa). The Enzyme Of Biotin Biosynthetic Pathway. Length = 384

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 64  KYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT 123
           +Y V Q +G  +  +    +NF++++YL    +P I +      ++ G+GS G     G 
Sbjct: 23  RYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGY 82
Query: 124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA 183
           +VVH  LE ++A ++G     L+  GF+ + + IAA + + D +  D   + ++      
Sbjct: 83  SVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASL 142
Query: 184 SRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR 243
           S  +++ F HN++ HL  LL         +    ++ ++ EGV+    D  PL +I  + 
Sbjct: 143 SPSQLRRFAHNDVTHLARLL--------ASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVT 194
Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
            ++   + VD++   G +G  G G      V  E   +++ +     G  G   + SS +
Sbjct: 195 QQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPE---LLVVTFGKGFGVSGAAVLCSSTV 251
Query: 304 IEHHRLSGSGYCFSASLPP 322
            ++         +S S+PP
Sbjct: 252 ADYLLQFARHLIYSTSMPP 270

>pdb|3HQT|A Chain A, Plp-Dependent Acyl-Coa Transferase Cqsa Length = 409

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ 189
           +E  +A F G +E  L   G++ +   +    + N  V++D   + ++  G   +  +  
Sbjct: 109 IEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAH 168
Query: 190 YFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249
            F HNN  HL  L+++               I+V+ +Y     I PL +++++  ++   
Sbjct: 169 PFMHNNCDHLRMLIQRHG----------PGIIVVDSIYSTLGTIAPLAELVNISKEFGCA 218
Query: 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG 295
           + VDES S GT G  G G+    G+ T EV  +  SL        G
Sbjct: 219 LLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRAG 263

>pdb|2WK8|A Chain A, Structure Of Holo Form Of Vibrio Cholerae Cqsa Length = 389

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ 189
           +E  +A F G +E  L   G++ +   +    + N  V++D   + ++  G   +  +  
Sbjct: 89  IEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAH 148
Query: 190 YFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249
            F HNN  HL  L+++               I+V+ +Y     I PL +++++  ++   
Sbjct: 149 PFMHNNCDHLRMLIQRHG----------PGIIVVDSIYSTLGTIAPLAELVNISKEFGCA 198
Query: 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG 295
           + VDES S GT G  G G+    G+ T EV  +  SL        G
Sbjct: 199 LLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRAG 243

>pdb|2WK7|A Chain A, Structure Of Apo Form Of Vibrio Cholerae Cqsa Length = 393

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 11/166 (6%)
Query: 130 LENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ 189
           +E  +A F G +E  L   G++ +   +    + N  V++D   + ++  G   +  +  
Sbjct: 89  IEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAH 148
Query: 190 YFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR 249
            F HNN  HL  L+++               I+V+ +Y     I PL +++++  ++   
Sbjct: 149 PFMHNNCDHLRMLIQRHG----------PGIIVVDSIYSTLGTIAPLAELVNISKEFGCA 198
Query: 250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG 295
           + VDES S GT G  G G+    G+ T EV  +  SL        G
Sbjct: 199 LLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRAG 243

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	457
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	1e-82
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	9e-81
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	2e-76
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	7e-76
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	8e-75
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	2e-69
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	3e-63
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum} Length = 398

 Score =  259 bits (664), Expect = 1e-82
 Identities = 100/389 (25%), Positives = 181/389 (46%), Gaps = 38/389 (9%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
            +  K    V I+G   + F +++YL    +  I K A D ++K G G  G R   GT  
Sbjct: 29  PIQSKQDTEVKIDGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLD 88

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIAS 184
           +H++LE  +++++G E   L+S GF ++   ++  + RND + +DE  + A I  G   S
Sbjct: 89  IHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDE-RDHASIIDGSRLS 147

Query: 185 RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLR 243
             KV  + HNNM+ L   L +  E        + K I  +G++ M   DI  L ++ S+ 
Sbjct: 148 FSKVIKYGHNNMEDLRAKLSRLPED-------SAKLICTDGIFSM-EGDIVNLPELTSIA 199

Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
           +++ A + VD++ S G +G  G G   +FG+  ++VD+I+G+   +L S+GGF  G + +
Sbjct: 200 NEFDAAVMVDDAHSLGVIGHKGAGTASHFGL-NDDVDLIMGTFSKSLASLGGFVAGDADV 258

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ 363
           I+  + +     FSAS+ P    +  KAL +++  P  + KL +  +   + L       
Sbjct: 259 IDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQL-----LD 313

Query: 364 RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAG-FAI-----TCPSHLDQEA 417
                G  ++P+  +++    +E         +  M    G F         P       
Sbjct: 314 HGFDLGATESPILPIFI--RSNEKT-----FWVTKMLQDDGVFVNPVVSPAVP------- 359

Query: 418 KKQKPSIRITCNISHTEQDMNSLIETLCK 446
             ++  IR +   +HT   ++  IE + K
Sbjct: 360 -AEESLIRFSLMATHTYDQIDEAIEKMVK 387

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A* Length = 427

 Score =  255 bits (653), Expect = 9e-81
 Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 36/386 (9%)

Query: 69  QKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHL 128
            KS     I G   I   T+NY+    +PD+     + ++K G G+CG R   GT   H+
Sbjct: 53  VKSPTEAVIRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHM 112

Query: 129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIASRCK 187
           ++E  +  F G     ++S G+  +   I+    + + V +D   + A I  G      +
Sbjct: 113 EVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDA-DSHASIYDGCQQGNAE 171

Query: 188 VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLRSKY 246
           +  F+HN+++ L++ L +  +          K +++EGVY M   DI PLK+++++  K+
Sbjct: 172 IVRFRHNSVEDLDKRLGRLPKE-------PAKLVVLEGVYSML-GDIAPLKEMVAVAKKH 223

Query: 247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH 306
            A + VDE+ S G  G  G GV E  G+   ++D ++G+   ++G+VGGF V +    E 
Sbjct: 224 GAMVLVDEAHSMGFFGPNGRGVYEAQGL-EGQIDFVVGTFSKSVGTVGGFVVSNHPKFEA 282

Query: 307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFL 366
            RL+   Y F+ASLPP +   A  ++  L        +L      +H  L         L
Sbjct: 283 VRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMGFR---L 339

Query: 367 VQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI------TCPSHLDQEAKKQ 420
                D+ +  + L   D E A       +    +  G  +        P          
Sbjct: 340 GTETCDSAIVAVML--EDQEQA-----AMMWQALLDGGLYVNMARPPATP--------AG 384

Query: 421 KPSIRITCNISHTEQDMNSLIETLCK 446
              +R +    HT   + +++     
Sbjct: 385 TFLLRCSICAEHTPAQIQTVLGMFQA 410

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A Length = 409

 Score =  243 bits (623), Expect = 2e-76
 Identities = 69/381 (18%), Positives = 134/381 (35%), Gaps = 42/381 (11%)

Query: 74  IVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLEND 133
           +        I   +++YL+   +P I+      + +          F   +     +E  
Sbjct: 53  LGKQASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKR 112

Query: 134 IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIASRCKVQYFK 192
           +A F G +E  L   G++ +   +    + N  V++D       +  G   +  +   F 
Sbjct: 113 LAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDF-FAHMSLWEGARYANAQAHPFM 171

Query: 193 HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLRSKYQARIF 251
           HNN  HL  L+++               I+V+ +Y      I PL +++++  ++   + 
Sbjct: 172 HNNCDHLRMLIQRHG----------PGIIVVDSIYSTL-GTIAPLAELVNISKEFGCALL 220

Query: 252 VDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSG 311
           VDES S GT G  G G+    G+ T EV  +  SL        G    ++ +        
Sbjct: 221 VDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRAGAIWCNNEVNRCVPFIS 279

Query: 312 SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR 371
               FS++L P+ A      L ++++  +    L      +   LSQ  +T         
Sbjct: 280 YPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLGLT------IRS 333

Query: 372 DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AI---TCPSHLDQEAKKQKPSIR 425
           ++ +  L     D+        + + D     G                    K K  IR
Sbjct: 334 ESQIIGLET--GDERNT-----EKVRDYLESNGVFGSVFCRPATS--------KNKNIIR 378

Query: 426 ITCNISHTEQDMNSLIETLCK 446
           ++ N    ++ +  +IE    
Sbjct: 379 LSLNSDVNDEQIAKIIEVCSD 399

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii} Length = 399

 Score =  241 bits (618), Expect = 7e-76
 Identities = 108/390 (27%), Positives = 173/390 (44%), Gaps = 36/390 (9%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
           ++       + +     +NF  +NYL   ++P + K A   +++ G G    R   GT  
Sbjct: 29  IITSPQNAEIKVGEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQT 88

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIAS 184
           +H +LE DI+ F+G ++T LYS  F  +       +   DA+  DE +N A I  G+   
Sbjct: 89  IHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDE-LNHASIIDGIRLC 147

Query: 185 RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244
           + +   +K+N M  LE  L++ DE+         K I  +GV+     I  LK I  L  
Sbjct: 148 KAQRYRYKNNAMGDLEAKLKEADEKGA-----RFKLIATDGVFSMDGIIADLKSICDLAD 202

Query: 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYI 303
           KY A + VD+S + G +G  G G  EY GV  + VD++ G+L  AL G+ GG+  G   I
Sbjct: 203 KYNALVMVDDSHAVGFIGENGRGTPEYCGV-ADRVDILTGTLGKALGGASGGYTSGHKEI 261

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVT 362
           IE  R     Y FS ++ P +   + K L LLK   P L  +L+E      + + +    
Sbjct: 262 IEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEK---- 317

Query: 363 QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AI---TCPSHLDQE 416
             F +    + P+  + L   D ++A       + D  +Q G           P      
Sbjct: 318 LGFQL-VPGNHPIIPVML--GDAQLA-----TNMADHLLQEGIYVVGFSYPVVP------ 363

Query: 417 AKKQKPSIRITCNISHTEQDMNSLIETLCK 446
               K  IR+  +  HT+Q ++  IE   +
Sbjct: 364 --MGKARIRVQMSAVHTQQQLDRAIEAFGQ 391

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4 Length = 401

 Score =  239 bits (611), Expect = 8e-75
 Identities = 103/391 (26%), Positives = 162/391 (41%), Gaps = 38/391 (9%)

Query: 66  VVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTN 124
           ++       + + +G   INF  +NYL    +PD+   A   +D +G G    R   GT 
Sbjct: 30  IITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQ 89

Query: 125 VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIA 183
             H +LE  +A+F+G+E+  LYS  F  +       +   DA+  D  +N A I  G+  
Sbjct: 90  DSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDA-LNHASIIDGVRL 148

Query: 184 SRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSL 242
            + K   + +N+MQ LE  L++  E     +      I  +GV+ M    I  LK +  L
Sbjct: 149 CKAKRYRYANNDMQELEARLKEARE-----AGARHVLIATDGVFSM-DGVIANLKGVCDL 202

Query: 243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS 301
             KY A + VD+S + G +G  G G  EY  V    VD+I G+L  AL G+ GG+     
Sbjct: 203 ADKYDALVMVDDSHAVGFVGENGRGSHEYCDV-MGRVDIITGTLGKALGGASGGYTAARK 261

Query: 302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV 361
            ++E  R     Y FS SL P +  A+ K L +++A   L  +L          +S    
Sbjct: 262 EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-- 319

Query: 362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AI---TCPSHLDQ 415
              F +    D  +  + L   D  VA     Q       + G           P     
Sbjct: 320 --GFTL-AGADHAIIPVML--GDAVVA-----QKFARELQKEGIYVTGFFYPVVP----- 364

Query: 416 EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446
              K +  IR   + +HT + +   +E   +
Sbjct: 365 ---KGQARIRTQMSAAHTPEQITRAVEAFTR 392

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A* Length = 384

 Score =  224 bits (573), Expect = 2e-69
 Identities = 84/391 (21%), Positives = 164/391 (41%), Gaps = 43/391 (10%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
            V Q +G  +  +    +NF++++YL    +P I +      ++ G+GS G     G +V
Sbjct: 25  PVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSV 84

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTGLIAS 184
           VH  LE ++A ++G     L+  GF+ + + IAA + + D +  D  ++ A +      S
Sbjct: 85  VHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADR-LSHASLLEAASLS 143

Query: 185 RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICPLKDILSLR 243
             +++ F HN++ HL  LL              ++ ++ EGV+ M+  D  PL +I  + 
Sbjct: 144 PSQLRRFAHNDVTHLARLLASPCPG--------QQMVVTEGVFSMD-GDSAPLAEIQQVT 194

Query: 244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYI 303
            ++   + VD++   G +G  G G      V   + ++++ +     G  G   + SS +
Sbjct: 195 QQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV---KPELLVVTFGKGFGVSGAAVLCSSTV 251

Query: 304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPS--LLTKLREKCNTMHSLLSQHKV 361
            ++         +S S+PP  A A   +L +++++       KL        + +     
Sbjct: 252 ADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF 311

Query: 362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AI---TCPSHLDQ 415
           T          + ++ L +   D+  A       + +   Q G    AI   T P     
Sbjct: 312 T-----LADSCSAIQPLIV--GDNSRA-----LQLAEKLRQQGCWVTAIRPPTVP----- 354

Query: 416 EAKKQKPSIRITCNISHTEQDMNSLIETLCK 446
                   +R+T   +H  QD++ L+E L  
Sbjct: 355 ---AGTARLRLTLTAAHEMQDIDRLLEVLHG 382

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A* Length = 401

 Score =  209 bits (533), Expect = 3e-63
 Identities = 84/387 (21%), Positives = 152/387 (39%), Gaps = 35/387 (9%)

Query: 69  QKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHL 128
           +      +        +  ++YL   ++P +     + ++  G GS G R   GT   H 
Sbjct: 35  KAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHR 94

Query: 129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVK--RNDAVFVDENINFA--IQTGLIAS 184
            LE +IA     E   ++S  ++ + + ++          ++ D  +N A  I+ G+  +
Sbjct: 95  RLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDS-LNHASMIE-GIKRN 152

Query: 185 RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS 244
               + F+HN++ HL EL+   D           K I  E VY    D  P+K+I  +  
Sbjct: 153 AGPKRIFRHNDVAHLRELIAADDPA-------APKLIAFESVYSMDGDFGPIKEICDIAE 205

Query: 245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYII 304
           ++ A  ++DE  + G  G  G GV E  G+    +D+  G+L  A G  GG+   S+ ++
Sbjct: 206 EFGALTYIDEVHAVGMYGPRGAGVAERDGLM-HRIDIFNGTLAKAYGVFGGYIAASARMV 264

Query: 305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVT 362
           +  R    G+ FS SLPP +A  A  ++  LK      L    +     +   L    + 
Sbjct: 265 DAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMP 324

Query: 363 QRFLVQGHRDTPLKYLYLQKSDDEVA---SKKLLQTICDMCIQAGFAITCPSHLDQEAKK 419
              +  G    P+  +     D       S  LL     + +Q     T P        +
Sbjct: 325 --IIDHGSHIVPVV-IG----DPVHTKAVSDMLLSDY-GVYVQPINFPTVP--------R 368

Query: 420 QKPSIRITCNISHTEQDMNSLIETLCK 446
               +R T +  H  + ++ L+  +  
Sbjct: 369 GTERLRFTPSPVHDLKQIDGLVHAMDL 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 2e-07
 Identities = 65/499 (13%), Positives = 137/499 (27%), Gaps = 168/499 (33%)

Query: 9   FYTSVG-------LFLPL-TLFIVLSLSLSKHKKHTINVDALINNWTPEP-IVSKAEKFK 59
           F+ ++        +   L  L   +  + +    H+ N+   I++   E   + K++ ++
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 60  -------DVSSKYVVDQKSGYIVNINGIPC-INFATHNYLSFVENPDIEKCAIDCIDKNG 111
                  +V +    +       N++   C I   T             K   D +    
Sbjct: 245 NCLLVLLNVQNAKAWNA-----FNLS---CKILLTTRF-----------KQVTDFLS--- 282

Query: 112 VGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE 171
                          H+ L++   +    E  +L           +   V          
Sbjct: 283 ----------AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT-------- 324

Query: 172 NIN-FAIQTGLIASRCKV-----QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEG 225
             N   +   +IA   +        +KH N   L  ++  +   + L     +K      
Sbjct: 325 -TNPRRL--SIIAESIRDGLATWDNWKHVNCDKLTTII--ESSLNVLEPAEYRKMFDRLS 379

Query: 226 VYMNSADICPLKDILSL----RSKYQARIFVDESVSFGTLGSTG-------HGVTEYFGV 274
           V+  SA I P   +LSL      K    + V++   +  +             +  Y  +
Sbjct: 380 VFPPSAHI-PTI-LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI--YLEL 435

Query: 275 STEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPP--------FLAV 326
             +  +    +L H              I++H+ +    +     +PP         +  
Sbjct: 436 KVKLENEY--AL-HRS------------IVDHYNIP-KTFDSDDLIPPYLDQYFYSHI-- 477

Query: 327 AANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE 386
                 HL                                    R T  + ++L   D  
Sbjct: 478 ----GHHLKNIE-----------------------------HPERMTLFRMVFL---DFR 501

Query: 387 VASKKLLQTICDMCIQAGFAITCPSHLD---QEAKKQKPSIRITCNISHTEQDMNSLIET 443
              +K+             A      +    Q+ K  KP   I  N    E+ +N++++ 
Sbjct: 502 FLEQKI--------RHDSTAWNASGSILNTLQQLKFYKP--YICDNDPKYERLVNAILDF 551

Query: 444 L---------CKSHDIAVQ 453
           L          K  D+ ++
Sbjct: 552 LPKIEENLICSKYTDL-LR 569

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	457
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	100.0
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	100.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	100.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	100.0
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	100.0
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	100.0
1z7d_A	433	Ornithine aminotransferase; structural genomics co	100.0
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	100.0
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	100.0
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	100.0
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	100.0
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.98
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.98
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.98
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.98
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.98
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.98
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.97
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.97
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.97
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.97
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.97
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.97
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.97
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.97
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.97
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.97
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.97
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.97
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.97
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.97
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.97
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.97
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.97
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.97
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.97
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.95
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.97
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.97
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.97
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.97
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.97
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.97
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.97
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.97
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.97
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.97
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.97
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.97
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.96
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.96
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.96
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.96
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.96
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.96
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.96
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.96
1svv_A	359	Threonine aldolase; structural genomics, structura	99.96
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.96
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.96
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.96
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.96
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.96
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.96
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.96
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.96
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.96
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.96
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.96
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.96
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.96
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.96
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.96
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.96
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.96
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.96
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.96
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.95
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.95
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.95
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.95
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.95
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.95
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.95
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.95
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.95
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.95
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.95
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.95
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.95
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.95
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.95
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.95
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.95
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.95
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.95
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.95
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.95
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.95
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.95
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.95
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.95
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.95
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.95
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.95
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.95
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.95
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.95
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.95
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.94
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.94
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.94
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.94
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.94
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.94
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.94
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.94
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.94
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.94
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.94
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.94
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.94
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.94
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.94
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.93
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.93
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.93
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.93
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.93
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.93
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.93
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.93
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.92
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.92
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.92
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.91
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.91
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.91
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.91
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.91
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.91
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.9
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.89
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.88
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.87
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.86
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.86
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.85
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.82
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.82
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.76
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.75

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=3.7e-50  Score=402.70  Aligned_cols=389  Identities=23%  Similarity=0.385  Sum_probs=334.4

Q ss_pred             hhhHHHHHcccCCCC-CCCccccccccCCceeee-cCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCC
Q psy15447         36 TINVDALINNWTPEP-IVSKAEKFKDVSSKYVVD-QKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVG  113 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~-~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~  113 (457)
                      ++++.+.+++..+.+ .+.         .+..+. +++|+++++||+++|||++++|+|+..+|++.+++.+++.+++.+
T Consensus        27 ~~~~~~~~~~~~~~g~~~r---------~~~~~~~~~~g~~~~~~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~   97 (427)
T 2w8t_A           27 FDGLIAERQKLLDSGVTDP---------FAIVMEQVKSPTEAVIRGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSG   97 (427)
T ss_dssp             GHHHHHHHHHHHHTTCCCT---------TCCCCSEEEETTEEEETTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHHHHHHcCCcce---------eeeeccccCCCceEeeCCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCC
Confidence            345555566666665 433         245677 999999999999999999999889877999999999999998877


Q ss_pred             CCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC
Q psy15447        114 SCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH  193 (457)
Q Consensus       114 ~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~  193 (457)
                      +++++..+|..+.+.+|+++|++++|.+.+++++||++|+..++++++++||.|+++.++|.++..+++..|.+++.+++
T Consensus        98 ~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~  177 (427)
T 2w8t_A           98 TCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH  177 (427)
T ss_dssp             CCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT
T ss_pred             CcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC
Confidence            77778888888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      +|+++|++.+++..       +.++++|++++++|++|.+.|+++|+++|++||++||+||+|+.|.++++|.++.++++
T Consensus       178 ~d~~~le~~l~~~~-------~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~  250 (427)
T 2w8t_A          178 NSVEDLDKRLGRLP-------KEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQG  250 (427)
T ss_dssp             TCHHHHHHHHHTSC-------SSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHhcc-------CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcC
Confidence            99999999997632       12578999999999999999999999999999999999999999988887888877788


Q ss_pred             CCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +.+ ++|++++|+||++|+.|||+++++++++.+......+.++++.++..++++.++++.+++.++++++++++.+++.
T Consensus       251 ~~~-~~di~~~s~sK~~g~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~  329 (427)
T 2w8t_A          251 LEG-QIDFVVGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALH  329 (427)
T ss_dssp             CTT-CCSEEEEESSSTTCSCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             CCc-CCcEEEecchhhhccCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            864 6799999999999999999999999888876654456667778999999999999988755678999999999999


Q ss_pred             HHhhcccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        354 SLLSQHKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      +.|++    .|+++..++ .++++++.+++..       ...++.+.|+++||++.++.+|..  +.+.+++|++++..+
T Consensus       330 ~~L~~----~g~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRi~~~~~~  396 (427)
T 2w8t_A          330 GGLKA----MGFRLGTETCDSAIVAVMLEDQE-------QAAMMWQALLDGGLYVNMARPPAT--PAGTFLLRCSICAEH  396 (427)
T ss_dssp             HHHHH----HTCEESCSSCCSSEEEEEESSHH-------HHHHHHHHHHHTTEECEEECTTTS--CTTCEEEEEECCTTC
T ss_pred             HHHHH----cCCcccCCCCCCCEEEEEECCHH-------HHHHHHHHHHHCCeEEeeeCCCCC--CCCCeEEEEEeCCCC
Confidence            99998    377775344 6788888886533       567899999999999998776543  233578999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHhcCC
Q psy15447        433 TEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      |++|+++++++|+++++++...
T Consensus       397 t~e~i~~~~~~l~~~l~~~~~~  418 (427)
T 2w8t_A          397 TPAQIQTVLGMFQAAGRAVGVI  418 (427)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHHHHHHHHhCcc
Confidence            9999999999999999887654

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=9.6e-47  Score=374.24  Aligned_cols=386  Identities=27%  Similarity=0.454  Sum_probs=329.4

Q ss_pred             hHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCC
Q psy15447         38 NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGP  117 (457)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~  117 (457)
                      .+.+.+++....+++.         .+..+++++|.+++++|++||||++++++++..+|++.+++.+++.+++.+++.+
T Consensus        10 ~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~v~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~   80 (399)
T 3tqx_A           10 QLNKEIEGLKKAGLYK---------SERIITSPQNAEIKVGEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASV   80 (399)
T ss_dssp             HHHHHHHHHHTTTCCC---------CCCCBCSCSSSEEEETTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSC
T ss_pred             HHHHHHHHHHHcCCcc---------ccccccCCCCceEeeCCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCc
Confidence            3444555555566655         4678899999999999999999999999897778999999999999988777777


Q ss_pred             CCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH
Q psy15447        118 RGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ  197 (457)
Q Consensus       118 ~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~  197 (457)
                      +..+|..+...++++.+++++|.+..+++++|++|+..++.+++++||.|+++.++|+++..+++..|.++..++.+|++
T Consensus        81 ~~~~g~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~  160 (399)
T 3tqx_A           81 RFICGTQTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKNNAMG  160 (399)
T ss_dssp             CCCCCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECTTCTT
T ss_pred             CccccCchHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCCCCHH
Confidence            77788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.+++....     ..++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.|.++..+.+..+.+++. .
T Consensus       161 ~l~~~l~~~~~~-----~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~  234 (399)
T 3tqx_A          161 DLEAKLKEADEK-----GARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVA-D  234 (399)
T ss_dssp             HHHHHHHHHHTT-----TCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCT-T
T ss_pred             HHHHHHHhhhcc-----CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC-C
Confidence            999999875410     1267899999999999999999999999999999999999998887787777766777763 3


Q ss_pred             CccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       278 ~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~  355 (457)
                      ++|++++|+||++| ++|||+++++++++.+......+.++++.++..++++.++++.+ +..++.+++++++.+++.+.
T Consensus       235 ~~di~~~s~sK~~~g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  314 (399)
T 3tqx_A          235 RVDILTGTLGKALGGASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAG  314 (399)
T ss_dssp             CCSEEEEESSSSSCSSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEecchHhcccCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence            45899999999998 88999999999999988766566667778999999999999887 43456889999999999999


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      |++    .|+++. ++.++++++.++...       ...++++.|.++||.+.+..++..  +.+.+++|++++..+|++
T Consensus       315 L~~----~g~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~~  380 (399)
T 3tqx_A          315 MEK----LGFQLV-PGNHPIIPVMLGDAQ-------LATNMADHLLQEGIYVVGFSYPVV--PMGKARIRVQMSAVHTQQ  380 (399)
T ss_dssp             HHH----HTCCBC-CCSSSEEEEEEECHH-------HHHHHHHHHHHTTEECCEECTTTS--CTTCEEEEEECCTTCCHH
T ss_pred             HHH----cCCCcC-CCCCCEEEEEeCCHH-------HHHHHHHHHHHCCCEEeeeCCCCC--CCCCceEEEEeecCCCHH
Confidence            998    466665 567888888877543       567899999999999987665422  234579999999899999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy15447        436 DMNSLIETLCKSHDIAV  452 (457)
Q Consensus       436 di~~~~~~l~~~~~~~~  452 (457)
                      |+++++++|+++++++.
T Consensus       381 ~i~~~~~~l~~~~~~~~  397 (399)
T 3tqx_A          381 QLDRAIEAFGQVGKKLG  397 (399)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999988753

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=1.2e-47  Score=382.43  Aligned_cols=358  Identities=18%  Similarity=0.294  Sum_probs=313.4

Q ss_pred             ecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEe
Q psy15447         68 DQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALY  146 (457)
Q Consensus        68 ~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~  146 (457)
                      .++.+.+++ .+|++||||++++|+++.+||++.+++.+++++++.+..+++..+|+.+...++++++++++|.+..+++
T Consensus        46 ~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~  125 (409)
T 3kki_A           46 KNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLS  125 (409)
T ss_dssp             TTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEE
T ss_pred             cCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEe
Confidence            355566666 4899999999999999999999999999999998877777777888888999999999999999999999


Q ss_pred             cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        147 SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       147 ~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ++|++|+..++++++++||.|+++.++|.++..++...|.++..++.+|++++++.+++.          ++++|+++++
T Consensus       126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~----------~~~~vi~~~~  195 (409)
T 3kki_A          126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRH----------GPGIIVVDSI  195 (409)
T ss_dssp             SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECTTCHHHHHHHHHHH----------CSCEEEEESB
T ss_pred             cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecCCCHHHHHHHHHhc----------CCeEEEECCC
Confidence            999999999999999999999999999999999999999999999999999999999762          2479999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEH  306 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~  306 (457)
                      +|++|.+.|+++|+++|++||++||+||+|+.|.+|++|.++...+++. .++||++.|+||++|+.||++++++++++.
T Consensus       196 ~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~gg~v~~~~~~~~~  274 (409)
T 3kki_A          196 YSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRAGAIWCNNEVNRC  274 (409)
T ss_dssp             CTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSCEEEEESSSGGGT
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCceEEEECHHHHHH
Confidence            9999999999999999999999999999999988888887777777774 467899999999999889999999998888


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      ++.....+.++++.++..++++.++++.+++.++++++++++.+++.+.|++    .++++.  +.++++++.++...  
T Consensus       275 ~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~--~~~~~~~~~~~~~~--  346 (409)
T 3kki_A          275 VPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQ----LGLTIR--SESQIIGLETGDER--  346 (409)
T ss_dssp             HHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHT----TTCCCC--CSSSEEEEEEESHH--
T ss_pred             HHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCccC--CCCCEEEEEeCCHH--
Confidence            8776666677777899999999999998877777889999999999999998    466654  46888888887543  


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                           ...++++.|+++||++.+..+|..  +.+.+++||+++..+|++|+++++++|+++++..
T Consensus       347 -----~~~~~~~~L~~~Gv~v~~~~~~~~--~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  404 (409)
T 3kki_A          347 -----NTEKVRDYLESNGVFGSVFCRPAT--SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG  404 (409)
T ss_dssp             -----HHHHHHHHHHHTTEECEEECTTSS--CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred             -----HHHHHHHHHHHCCceEeeeCCCCc--CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence                 456799999999999988665432  3446799999999999999999999999998764

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=3.6e-45  Score=363.43  Aligned_cols=370  Identities=26%  Similarity=0.414  Sum_probs=309.9

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE  141 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~  141 (457)
                      .|..+++++|+++++ +|++||||++++++++..+|++.+++.+++++++.++++++..+|..+...++++++++++|.+
T Consensus        27 ~~~~~~~~~g~~~~~~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~  106 (401)
T 1fc4_A           27 EERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGME  106 (401)
T ss_dssp             CCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCS
T ss_pred             eeeeeccCCCceEEeeCCccEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCC
Confidence            477889999999996 9999999999988886568999999999999887655444555566788899999999999998


Q ss_pred             cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      ..+++++|++|+..++++++++||.|+++.++|+++..+++..|.++..++.+|++++++.+++...+     ..++++|
T Consensus       107 ~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v  181 (401)
T 1fc4_A          107 DAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEARLKEAREA-----GARHVLI  181 (401)
T ss_dssp             EEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTCHHHHHHHHHHHHHT-----TCSSEEE
T ss_pred             cEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECCCCHHHHHHHHHHhhcc-----CCCceEE
Confidence            88999999999999999999999999999999999999999999999999999999999999764310     0156799


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~  300 (457)
                      ++++++|++|.+.|+++|+++|++||+++|+||+|+.|..+++|.++.+.+++.+ +.|+++.|+||++ |+.||+++++
T Consensus       182 ~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~gG~~~~~  260 (401)
T 1fc4_A          182 ATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASGGYTAAR  260 (401)
T ss_dssp             EEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSCEEEEEC
T ss_pred             EEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCCEEEEcC
Confidence            9999999999999999999999999999999999986766555655555567654 6789999999999 7778999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +++++.+......+.++.+.+++.++++.++++.+++.++++++++++.+++.+.|++    .|+++. ++.++++++.+
T Consensus       261 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~  335 (401)
T 1fc4_A          261 KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSA----AGFTLA-GADHAIIPVML  335 (401)
T ss_dssp             HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH----TTCCBC-CSSSSEEEEEE
T ss_pred             HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----cCCccc-CCCCCEEEEEc
Confidence            9999988765434545667799999999999998865567889999999999999998    366665 46788888887


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +...       ...++.+.|.++||.+.+..++..  +...+++|++++..+|++|+++++++|+++++++.
T Consensus       336 ~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  398 (401)
T 1fc4_A          336 GDAV-------VAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             ECHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             CChH-------HHHHHHHHHHHCCcEEeeecCCCC--CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            6432       456799999999999987765422  22346899999998999999999999999988764

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=1e-44  Score=358.08  Aligned_cols=360  Identities=22%  Similarity=0.358  Sum_probs=302.3

Q ss_pred             CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447         63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE  142 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  142 (457)
                      .|..+++++|.+++.+|++|+||+++.++++..+|++.+++.+++++++.+++.++..+|..+...++++.+++++|.+.
T Consensus        22 ~~~~~~~~~g~~~~~~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  101 (384)
T 1bs0_A           22 RRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSR  101 (384)
T ss_dssp             CCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE
T ss_pred             ccccccCCCCceEEECCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc
Confidence            47788999999999999999999998777766689999999999998776544455555777889999999999999998


Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      .+++++|++|+..++++++++||.|+++.++|+.+...++..|.+++.++.+|++++++.+++..        +.+++|+
T Consensus       102 ~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~--------~~~~~v~  173 (384)
T 1bs0_A          102 ALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPC--------PGQQMVV  173 (384)
T ss_dssp             EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCC--------SSCEEEE
T ss_pred             EEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHhcC--------CCCeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999987532        2368999


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY  302 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~  302 (457)
                      +++++||+|.+.|+++|+++|++||+++|+||+|+.|.++++|.++...++.   .+|++++|+||++|+.||+++++++
T Consensus       174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~---~~di~~~s~sK~~~~~GG~~~~~~~  250 (384)
T 1bs0_A          174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV---KPELLVVTFGKGFGVSGAAVLCSST  250 (384)
T ss_dssp             EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC---CCSEEEEESSSTTSSCCEEEEECHH
T ss_pred             EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC---CCcEEEeeccchhhccCcEEEeCHH
Confidence            9999999999999999999999999999999999988766555554445553   3479999999999988999999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +++.++.....+.++++.+++.++++.++++.++  ..++.+++++++++++.+.|++    .++++. ++.++++++.+
T Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~  325 (384)
T 1bs0_A          251 VADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQD----LPFTLA-DSCSAIQPLIV  325 (384)
T ss_dssp             HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT----SSCEEC-SCCSSBCCEEE
T ss_pred             HHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh----cCCccc-CCCCCEEEEEe
Confidence            9988876544455555679999999999998876  3346788999999999999998    467765 35677777777


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +...       ...++.+.|.++||.+.+..++..  +...+++|++++..+|++|+++++++|+++
T Consensus       326 ~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          326 GDNS-------RALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             ESHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             CCHH-------HHHHHHHHHHHCCcEEEeecCCCC--CCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            5432       466899999999999988765421  223478999999989999999999999865

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=100.00  E-value=2.7e-46  Score=371.56  Aligned_cols=384  Identities=13%  Similarity=0.115  Sum_probs=293.7

Q ss_pred             cccCCCChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHH
Q psy15447         29 LSKHKKHTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAI  104 (457)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~  104 (457)
                      |.+....++++.+...++.|.+..++.....+  .|+++++++|+|||+ |||+||||.++   ..+|+ +||+|.+|+.
T Consensus        37 ~~~~~p~s~~~~~~a~~~~pgg~~~~~~~~~~--~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH-~hp~v~~Av~  113 (454)
T 4ao9_A           37 FTDANPASQRQFEAQARYMPGANSRSVLFYAP--FPLTIARGEGAALWDADGHRYADFIAEYTAGVYGH-SAPEIRDAVI  113 (454)
T ss_dssp             HHHHCHHHHHHHHHHTTTSGGGCSSGGGCCSS--CCCEEEEEETTEEEETTCCEEEESSGGGGTTTTCS-CCHHHHHHHH
T ss_pred             HhhcCcHhHHHHHHHhhhCCCCCCCCccccCC--CCccEEEeecCEEEECCCCEEEEccccHHhhcccC-CCHHHHHHHH
Confidence            44444557888999999999888776554332  589999999999995 99999999765   23454 4899999999


Q ss_pred             HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHH
Q psy15447        105 DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTG  180 (457)
Q Consensus       105 ~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~  180 (457)
                      +|+++.. ..+      +.++...+|+++|++.+ +.+.++|++||++|++.||+..   +++.++|..+..+|+.+...
T Consensus       114 ~q~~~~~-~~~------~~~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~  186 (454)
T 4ao9_A          114 EAMQGGI-NLT------GHNLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGF  186 (454)
T ss_dssp             HHHHTCS-CCC------SEESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBB
T ss_pred             HHHhcCC-Ccc------CCcHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccc
Confidence            9998732 221      23566788999999977 5778899999999999999764   57888889999999876543


Q ss_pred             HHhcC-----CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEE
Q psy15447        181 LIASR-----CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIF  251 (457)
Q Consensus       181 ~~~~g-----~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li  251 (457)
                      ....+     .....+++||.+++++.+++..        +.+++||+||+++++|.+.|    |++|+++|++||++||
T Consensus       187 ~~~~~~~~~~~~~~~~p~nd~~~l~~~l~~~~--------~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI  258 (454)
T 4ao9_A          187 GARPSPTTVPFDFLVLPYNDAQTARAQIERHG--------PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLV  258 (454)
T ss_dssp             SSSBCTTSCCSEEEEECTTCHHHHHHHHHHTG--------GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEE
T ss_pred             cccccCccCCCCcccCCCchHHHHHHHHhhcC--------CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEE
Confidence            22222     3466789999999999998765        46899999999999999987    9999999999999999


Q ss_pred             EEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce--ecCCCcHHHHHH
Q psy15447        252 VDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC--FSASLPPFLAVA  327 (457)
Q Consensus       252 ~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa  327 (457)
                      +||+++ |++|.  .+..+++|+.|   ||+  |++|++|+  +.|++++++++++.+......+.  .+.+.||++|++
T Consensus       259 ~DEV~t-GR~G~--~~a~e~~gv~P---Di~--t~gK~lggG~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AA  330 (454)
T 4ao9_A          259 FDEVMT-SRLAP--HGLANKLGIRS---DLT--TLGKYIGGGMSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAA  330 (454)
T ss_dssp             EECTTG-GGGST--TCHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHH
T ss_pred             EECCCc-CCCcc--ccchhccCCCC---cEE--EeccccCCCCcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHH
Confidence            999997 56654  34568999988   777  89999963  45889999999988754332222  233469999999


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHHHHHHHHHH
Q psy15447        328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLLQTICDMCI  401 (457)
Q Consensus       328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~~~~~~~l~  401 (457)
                      ++++|+++++ +++.+++++++++|++.|+++....++.......+.++.+.+.....     . ..+......+...|+
T Consensus       331 ala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll  409 (454)
T 4ao9_A          331 GYAGLTKLFT-PEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL  409 (454)
T ss_dssp             HHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH
Confidence            9999999864 56889999999999999987432223221113457788887654211     0 112335567888999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++||++.|..             ++.++..||++|||++++++++++++..
T Consensus       410 ~~Gv~~~p~~-------------~~~~s~~~T~~dId~~l~al~~~l~~~~  447 (454)
T 4ao9_A          410 NEDIYSSPRG-------------FVVLSLPLTDADIDRYVAAIGSFIGGHG  447 (454)
T ss_dssp             HTTEECCTTC-------------EEECCTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred             HCCEEEcCCC-------------CEEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence            9999986532             2456677999999999999999998764

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=2.9e-44  Score=356.58  Aligned_cols=369  Identities=26%  Similarity=0.456  Sum_probs=308.8

Q ss_pred             CceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc
Q psy15447         63 SKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE  142 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  142 (457)
                      .|..+++++|++++.+|++++||++++++++..+|.+.+++.+++++++..+.+++...|..+...++++.+++++|.+.
T Consensus        26 ~~~~~~~~~g~~~~~~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~  105 (398)
T 3a2b_A           26 YFRPIQSKQDTEVKIDGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEA  105 (398)
T ss_dssp             SSCCBCSCSSSEEEETTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSE
T ss_pred             ceeeecCCCCceEEECCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc
Confidence            57889999999999999999999998877776789999999999988765555555566788999999999999999999


Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ++++++|++|+..++++++++||.|+++.++|+++...++..|.++..++..|++++++.+++..       ++++++|+
T Consensus       106 v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~-------~~~~~~v~  178 (398)
T 3a2b_A          106 AILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLP-------EDSAKLIC  178 (398)
T ss_dssp             EEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSC-------SSSCEEEE
T ss_pred             EEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhc-------cCCceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999997632       01568999


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSY  302 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~  302 (457)
                      +++++||+|.+.|+++|+++|++||+++|+||+|+.|.+++.+..+.+.+++. +++|++++|+||++|+.|||++++++
T Consensus       179 ~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~di~~~s~sK~~~~~GG~~~~~~~  257 (398)
T 3a2b_A          179 TDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLN-DDVDLIMGTFSKSLASLGGFVAGDAD  257 (398)
T ss_dssp             EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSCEEEEECHH
T ss_pred             EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCC-cCCeEEEecccccccCCCcEEEeCHH
Confidence            99999999999999999999999999999999999887765555555555653 35689999999999987899999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +++.+......+.++++.++..++++.++++.++..++.+++++++.+++.+.|++    .|+++. .+.++++++.++.
T Consensus       258 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~g~~~~~~~~~  332 (398)
T 3a2b_A          258 VIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLD----HGFDLG-ATESPILPIFIRS  332 (398)
T ss_dssp             HHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHH----TTCCBC-SCCSSEEEEECCC
T ss_pred             HHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHh----cCCCcC-CCCCCEEEEEcCC
Confidence            99888764433455556688877777788887765567889999999999999998    366664 3457888888764


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ..       ...++.+.|.++||.+.++..+..  +...+++|++++..+|++|+++++++|+++++++.-
T Consensus       333 ~~-------~~~~l~~~l~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~~  394 (398)
T 3a2b_A          333 NE-------KTFWVTKMLQDDGVFVNPVVSPAV--PAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAEV  394 (398)
T ss_dssp             HH-------HHHHHHHHHHHTTEECEEECTTTS--CGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC-
T ss_pred             HH-------HHHHHHHHHHHCCcEEEeeCCCCC--CCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhCc
Confidence            32       456799999999999988765422  123578999999889999999999999999887653

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=100.00  E-value=3.9e-44  Score=357.78  Aligned_cols=382  Identities=13%  Similarity=0.136  Sum_probs=288.3

Q ss_pred             hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG  111 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~  111 (457)
                      ++++.+..++..+.++..+        .|+++++++|+|||+ |||+||||.++   ..+|++ ||+|.+|+.+|+.++.
T Consensus        27 s~~l~~r~~~~~~~~~~~~--------~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~Ai~~q~~~~~   97 (456)
T 4atq_A           27 SQALAERRSAVVAAGVASG--------VPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGAS-DPAVVAAVQEAAAHFT   97 (456)
T ss_dssp             HHHHHHHHHHHBCTTCCCS--------CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHhCCCCCCCC--------CCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCC-CHHHHHHHHHHHhhcc
Confidence            6677777777766655432        588899999999995 99999999764   445664 8999999999999965


Q ss_pred             CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      +..    .+..+++...+|+++|+++.+   .++++|++||++|++.|++.   +.++.++|..+..+|+.+..++.+++
T Consensus        98 ~~~----~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~  173 (456)
T 4atq_A           98 HTC----FMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTA  173 (456)
T ss_dssp             CCT----TTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred             Ccc----cCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcccccccccc
Confidence            422    223357888899999999885   45688999999999999975   46788888899999999887777654


Q ss_pred             C-------------eEEEecCC-----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hH
Q psy15447        186 C-------------KVQYFKHN-----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LK  237 (457)
Q Consensus       186 ~-------------~~~~~~~~-----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~  237 (457)
                      .             .+..+|.+           +.+.+++.++.....   ..++++++|++||+++.+|.+.|    ++
T Consensus       174 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~---~~~~~iAAvivEPiqg~gG~~~p~~~fl~  250 (456)
T 4atq_A          174 KAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQ---IGGDQVAAIIIEPIQGEGGFIVPAEGFLP  250 (456)
T ss_dssp             CCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHH---TCGGGEEEEEECSSBTTTTCBCCCTTHHH
T ss_pred             CccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHh---hcCCceEEEEeccccCCCCccccchhhhH
Confidence            2             23333322           345555554432211   11257899999999999998876    89


Q ss_pred             HHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc
Q psy15447        238 DILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY  314 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~  314 (457)
                      +|+++|++||++||+||+++ +|++|.  .+..+++|+.|   ||+  +++|++|+  +.|++++++++++.+....++.
T Consensus       251 ~lr~lc~~~gillI~DEV~tG~GRtG~--~~a~e~~gv~P---Div--t~gK~lggg~P~~av~~~~~i~~~~~~~~~~~  323 (456)
T 4atq_A          251 ALSEWAKEKGIVFIADEVQSGFCRTGE--WFAVDHEGVVP---DII--TMAKGIAGGLPLSAITGRADLLDAVHPGGLGG  323 (456)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGTTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTTSCTTSSCC
T ss_pred             HHHHHHhhcCCceEecccccccCCccc--cccccccCCCC---chh--hhhhcccCcCCceeeEecHHHHhcccccCCCC
Confidence            99999999999999999985 455553  34568999988   787  79999963  4478899999988876665555


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccC---CeEEec--cCCCCeEEEEecCCcchHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQ---RFLVQG--HRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~---~~~~~~--~~~~~~~~i~~~~~~~~~~~  389 (457)
                      +|+  .+|++|++++++|+++++++ +.++++++.+++++.|+++....   ..++++  +..+.++.+.+..+...+..
T Consensus       324 Tf~--gnpla~aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~  400 (456)
T 4atq_A          324 TYG--GNPVACAAALAAIDTMEQHD-LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPN  400 (456)
T ss_dssp             SSS--SCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBC
T ss_pred             CCC--CChHHHHhhHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcC
Confidence            555  49999999999999998764 88999999999999887743211   111111  34578888888654322222


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .....++.+.|+++|+++.+.+       ...+.+||.|++.+|++|+|+++++|+++++.
T Consensus       401 ~~~~~~v~~~~~~~Gvl~~~~g-------~~~~~irl~PpL~it~~~id~~l~~l~~al~a  454 (456)
T 4atq_A          401 AELTKAVAAACLKEGVIILTCG-------TYGNVIRLLPPLVISDELLIDGLEVLAAAIKA  454 (456)
T ss_dssp             HHHHHHHHHHHHHTTEECEEEC-------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEecC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            3356789999999999987543       22579999999999999999999999999874

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=100.00  E-value=1e-43  Score=356.07  Aligned_cols=362  Identities=15%  Similarity=0.099  Sum_probs=274.7

Q ss_pred             CCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         62 SSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      ..|++|++++|+|||+ |||+||||.++.   .+|+ +||+|.+|+.+|+++....+   ..+...++...+|+++|+++
T Consensus        48 ~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~~---~~~~~~~~~~~~lAe~L~~~  123 (473)
T 4e3q_A           48 RGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGF-DHKGLIDAAKAQYERFPGYH---AFFGRMSDQTVMLSEKLVEV  123 (473)
T ss_dssp             HCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCS-CCHHHHHHHHHHHHHCCCCC---CCTTEEEHHHHHHHHHHHHH
T ss_pred             CCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccC-CCHHHHHHHHHHHHhccccc---ccccccCHHHHHHHHHHHhh
Confidence            3589999999999995 999999997752   3455 48999999999999965321   12223578889999999999


Q ss_pred             cC--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe-----------EEEecCCC
Q psy15447        138 MG--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK-----------VQYFKHNN  195 (457)
Q Consensus       138 ~g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~d  195 (457)
                      .+  .++++|++||++|++.|++...         ++..+|.....||+.+..++.+++..           ...++.++
T Consensus       124 ~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~  203 (473)
T 4e3q_A          124 SPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPH  203 (473)
T ss_dssp             SSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCC
T ss_pred             CCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCc
Confidence            85  5689999999999999998642         34457788899999988888777521           22222211


Q ss_pred             ------------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        196 ------------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       196 ------------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                        .+++++.+.+..       ++++++|++||+++.+|.+.|    +++|+++|++||++||+|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~D  276 (473)
T 4e3q_A          204 YWRYGEEGETEEQFVARLARELEETIQREG-------ADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISD  276 (473)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEE
T ss_pred             ccccccccchhhHHHHHHHHHHHHHHHhhC-------CCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEecc
Confidence                              234555555433       267899999999999998876    899999999999999999


Q ss_pred             cCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447        254 ESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  324 (457)
                      |+++.  +|++|.+ ..+++|+.|   ||+  +++|++|+   +.|++++++++++.+...     ...+.++.+.+|++
T Consensus       277 EV~tG--fGRtG~~fa~e~~gv~P---Di~--t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla  349 (473)
T 4e3q_A          277 EVICG--FGRTGNTWGCVTYDFTP---DAI--ISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVG  349 (473)
T ss_dssp             CTTTS--SSTTSSSCHHHHTTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHH
T ss_pred             Ccccc--CCcccchhHHHhcCCCC---ChH--HhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcch
Confidence            99852  3444554 468899988   787  79999953   457889999998877432     11123334459999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMC  400 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l  400 (457)
                      |++++++|+++++++ +.+++++++++|++.|+++...+.+.-+ +..+.++.+.+..+...    ........++.+.|
T Consensus       350 ~Aaala~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~v~~v-RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~  427 (473)
T 4e3q_A          350 CAIALKAIDVVMNEG-LAENVRRLAPRFEERLKHIAERPNIGEY-RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTC  427 (473)
T ss_dssp             HHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH
T ss_pred             hhhhhhhhhhhcccc-HHHHHHHHHHHHHHHHHHHhcCCCeeEE-eecceEEEEEEecCccccccccccHHHHHHHHHHH
Confidence            999999999998764 8899999999999999886544554322 34578888887543211    11122456799999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +++|+++++.+          +.+||+||+.+|++|+|+++++++++++++..
T Consensus       428 ~~~Gll~~~~g----------~~i~l~PPL~it~~eid~~~~~l~~al~~v~a  470 (473)
T 4e3q_A          428 TDLGLICRPLG----------QSVVLCPPFILTEAQMDEMFDKLEKALDKVFA  470 (473)
T ss_dssp             HHTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCcEEEecC----------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999987643          78999999999999999999999999987643

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=100.00  E-value=8.8e-43  Score=352.66  Aligned_cols=360  Identities=14%  Similarity=0.129  Sum_probs=276.7

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++|+ ||++||||+++   +++|++ ||+|++|+.+++++....++   ...+.++...+|+++|++++
T Consensus        37 ~p~~~~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~~~~~~~~~~---~~~~~~~~~~~lae~l~~~~  112 (472)
T 3hmu_A           37 GTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYG-RDELAEVAARQMRELPYYNT---FFKTTHVPAIALAQKLAELA  112 (472)
T ss_dssp             CCEEEEEEEBTEEEETTCCEEECTTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCS---SSSEECHHHHHHHHHHHHHS
T ss_pred             CCeeEEEeecCEEEECCCCEEEECCCchhhccCCCC-CHHHHHHHHHHHHhcccccc---ccccCCHHHHHHHHHHHHhC
Confidence            588999999999995 99999999886   556765 89999999999998653322   22346789999999999998


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhcC---------CCCEEEEeCcccHHHHHHHHhcCCe-----------EEEec--C-
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYVK---------RNDAVFVDENINFAIQTGLIASRCK-----------VQYFK--H-  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~~---------~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~--~-  193 (457)
                      +  .+++++++||++|++.+++++..         +.++|+.+..+|+.+..+..+++..           +..++  . 
T Consensus       113 ~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~  192 (472)
T 3hmu_A          113 PGDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNW  192 (472)
T ss_dssp             CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCH
T ss_pred             CCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCcc
Confidence            5  46789999999999999998763         4456677888898888777766532           22333  2 


Q ss_pred             ---CC-----------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447        194 ---NN-----------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       194 ---~d-----------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa  255 (457)
                         ++           +++|++.+++..       ++++++|++||+++++|.+.|    |++|+++|++||++||+||+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv  265 (472)
T 3hmu_A          193 WAEGGDMDPEEFGLARARELEEAILELG-------ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEV  265 (472)
T ss_dssp             HHHCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred             ccCCcccCHHHHHHHHHHHHHHHHHhcC-------CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence               22           778888887543       146789999999999999887    99999999999999999999


Q ss_pred             cc-cccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHH
Q psy15447        256 VS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKA  331 (457)
Q Consensus       256 ~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~  331 (457)
                      |+ +|+.|.  .+..+++++.|   |++  ||||++|+.|   |++++++++++.+......+.++.+.+|++|++++++
T Consensus       266 ~~gfgr~G~--~~a~~~~~v~p---di~--t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aa  338 (472)
T 3hmu_A          266 ICGFGRTGN--WFGTQTMGIRP---HIM--TIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALEN  338 (472)
T ss_dssp             TTTTTTTSS--SCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHH
T ss_pred             ccCCcccCc--cchhHHhCCCC---cee--eechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHH
Confidence            86 554443  34467888877   676  7999997543   8999999999988322112233445699999999999


Q ss_pred             HHHHhhCcHHHHHHH-HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HH---H-HHHHHHHHHHHHHcCe
Q psy15447        332 LHLLKANPSLLTKLR-EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VA---S-KKLLQTICDMCIQAGF  405 (457)
Q Consensus       332 l~~~~~~~~~~~~l~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~---~-~~~~~~~~~~l~~~Gi  405 (457)
                      |+.+++. ++.++++ ++.+++++.|+++...+.+... ++.+.++.+.+..+... ..   . .....++++.|+++||
T Consensus       339 L~~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  416 (472)
T 3hmu_A          339 LRILEEE-NILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNL  416 (472)
T ss_dssp             HHHHHHT-THHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTB
T ss_pred             HHHHHHh-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCc
Confidence            9988764 5889999 9999999999875434445443 45677888887643210 00   0 1135678999999999


Q ss_pred             eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++++.+          +++||+|++.+|++|+++++++|+++++++.
T Consensus       417 ~v~~~g----------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~  453 (472)
T 3hmu_A          417 IMRHVG----------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ  453 (472)
T ss_dssp             CCEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            987642          7999999999999999999999999987664

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=100.00  E-value=1.4e-42  Score=351.67  Aligned_cols=360  Identities=14%  Similarity=0.151  Sum_probs=275.9

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++|+ ||++||||+++   +.+|+. ||+|++|+.++++++++++.    +.+.++.+.+|+++|++++
T Consensus        36 ~p~~~~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~la~~l~~~~  110 (476)
T 3i5t_A           36 AQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYG-RREIVDAMAHQAMVLPYASP----WYMATSPAARLAEKIATLT  110 (476)
T ss_dssp             CCCBEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCCCCCT----TTCBCHHHHHHHHHHHTTS
T ss_pred             CCeeEEEeecCEEEECCCCEEEECCCchhhccCCCC-CHHHHHHHHHHHHhccCccc----CccCCHHHHHHHHHHHhcC
Confidence            588999999999995 99999999886   446664 89999999999998654332    1347889999999999998


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---------CCCCEEEEeCcccHHHHHHHHhcCCe------------EEEec--C
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---------KRNDAVFVDENINFAIQTGLIASRCK------------VQYFK--H  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---------~~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~--~  193 (457)
                      +  .+++++++||++|++.|+++++         ++.++|+.+..+|+.+..+..+++..            +..++  +
T Consensus       111 ~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  190 (476)
T 3i5t_A          111 PGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPN  190 (476)
T ss_dssp             STTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCC
T ss_pred             CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCc
Confidence            4  6788999999999999999874         34456777888898888777766532            22222  2


Q ss_pred             -----C-C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcC
Q psy15447        194 -----N-N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDES  255 (457)
Q Consensus       194 -----~-d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa  255 (457)
                           + |        +++|++.+++..       ++++++|++||+++++|.+.|    |++|+++|++||++||+||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~le~~i~~~~-------~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv  263 (476)
T 3i5t_A          191 PRHAGNRSQEAFLDDLVQEFEDRIESLG-------PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEV  263 (476)
T ss_dssp             GGGCTTSCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred             ccccCCCchHHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEec
Confidence                 2 1        788988887543       146789999999999998766    99999999999999999999


Q ss_pred             cccccccCCCCc-ccc-ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC---C--cceecCCCcHHHH
Q psy15447        256 VSFGTLGSTGHG-VTE-YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG---S--GYCFSASLPPFLA  325 (457)
Q Consensus       256 ~~~g~~g~~g~~-~~~-~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~  325 (457)
                      |+.  +|++|.. ..+ ++++.|   |++  |+||++|+   +.|++++++++++.+....   .  .+.++.+.+|++|
T Consensus       264 ~~g--~gr~G~~~~~~~~~~v~p---di~--t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~  336 (476)
T 3i5t_A          264 VTG--FGRCGEWFASEKVFGVVP---DII--TFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVAC  336 (476)
T ss_dssp             TTT--TTTTSSSCHHHHTTCCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHH
T ss_pred             ccC--CccccCceeeecccCCCc---chh--hhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHH
Confidence            862  3444443 346 888877   676  79999974   3388999999998886531   1  1223445699999


Q ss_pred             HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHHHH
Q psy15447        326 VAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDMCI  401 (457)
Q Consensus       326 aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~l~  401 (457)
                      ++++++|+.++++ ++.++++++.+++++.|+++...+.+... ++.+.++++.+..+...    ........++++.|+
T Consensus       337 aAa~aaL~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  414 (476)
T 3i5t_A          337 AAALANIELMERE-GIVDQAREMADYFAAALASLRDLPGVAET-RSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF  414 (476)
T ss_dssp             HHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCC-----CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceeEEEEecCccccccccchhHHHHHHHHHHH
Confidence            9999999988764 58899999999999999875434444443 45677888877654211    111123567899999


Q ss_pred             HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        402 QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       402 ~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++||++++.+          +++||+|++.+|++|+++++++|+++++++.+
T Consensus       415 ~~Gv~v~~~g----------~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~  456 (476)
T 3i5t_A          415 ELGLIVRPLG----------DLCVISPPLIISRAQIDEMVAIMRQAITEVSA  456 (476)
T ss_dssp             HTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCEEEecC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999987632          78999999999999999999999999877643

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=100.00  E-value=5.5e-42  Score=340.51  Aligned_cols=352  Identities=21%  Similarity=0.370  Sum_probs=289.5

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      ||++++||.+|++++++.+|++.+++.+++++++..+++++..++..+...++++++++++|.+..+++++|++++..++
T Consensus        44 ~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~  123 (401)
T 2bwn_A           44 GKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATL  123 (401)
T ss_dssp             CEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHH
T ss_pred             CCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHH
Confidence            68999999999888887789999999999998776655566667788899999999999999988899999999888888


Q ss_pred             Hhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        158 AAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       158 ~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      .++.  .+||.|+++.++|.++..+++..|.++..++.+|++++++.+++...       +++++|++++++|++|.+.|
T Consensus       124 ~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~le~~l~~~~~-------~~~~~v~~~~~~nptG~~~~  196 (401)
T 2bwn_A          124 STLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADDP-------AAPKLIAFESVYSMDGDFGP  196 (401)
T ss_dssp             HHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTTCHHHHHHHHHHSCT-------TSCEEEEEESBCTTTCCBCC
T ss_pred             HHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhhcc-------CCceEEEEecCcCCCCCcCC
Confidence            7754  58999999999999999999999999999999999999999976431       35689999999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcce
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      +++|+++|++||+++|+||+|+.|.+|+.|.++...+++. ++.|++++|+||++|+.||++++++++++.++.....+.
T Consensus       197 l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~-~~~~i~~~s~sK~~~~~GG~~~~~~~~~~~l~~~~~~~~  275 (401)
T 2bwn_A          197 IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLM-HRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFI  275 (401)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCG-GGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCcc-ccCcEEEeechhhccCCCCEEecCHHHHHHHHHhCcCce
Confidence            9999999999999999999999888887777665555553 245899999999999889999999999888775444445


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLL  393 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  393 (457)
                      ++++.+++.++++.++++.+++.  ++++++++++.+++.+.|++    .|+++.. +.++++++.++...       ..
T Consensus       276 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~-~~~~~~~~~~~~~~-------~~  343 (401)
T 2bwn_A          276 FSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKA----LGMPIID-HGSHIVPVVIGDPV-------HT  343 (401)
T ss_dssp             TSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----HTCCBCC-CSSSCEEEECCCHH-------HH
T ss_pred             ecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH----CCCcccC-CCCCeEEEEeCChH-------HH
Confidence            55555778888888999888654  56788999999999999988    3666653 44568888775422       45


Q ss_pred             HHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        394 QTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       394 ~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .++.+.|+ ++||.+.+...+..  +.+.+++|++++..+|++|+++++++|+++++++
T Consensus       344 ~~~~~~L~~~~gi~v~~~~~~~~--~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~  400 (401)
T 2bwn_A          344 KAVSDMLLSDYGVYVQPINFPTV--PRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC  400 (401)
T ss_dssp             HHHHHHHHHHHCEECCEECTTTS--CTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHhcCCEEEeecCCCCC--CCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence            67889996 78999987664321  2233689999999999999999999999887543

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=100.00  E-value=7.2e-42  Score=343.39  Aligned_cols=345  Identities=17%  Similarity=0.154  Sum_probs=273.1

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .|+++++++|+++|+ ||++||||+++ ++++++ .||++.+|+.+++++++..+   +.  ...+...+++++|++++|
T Consensus        58 ~~~~~~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~g  132 (439)
T 2oat_A           58 LPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTS---RA--FYNNVLGEYEEYITKLFN  132 (439)
T ss_dssp             CSCEEEEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEESSHHHHHHHHHHHHT
T ss_pred             CCeeEEeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCccc---Cc--cCCHHHHHHHHHHHHhcC
Confidence            477889999999995 99999999884 566666 78999999999998864321   21  146778999999999999


Q ss_pred             CCcEEEecccHHHHHHHHHhhc---------CCC-C-EEEEeCcccHHHHHHHHhcC------------CeEEEecCCCH
Q psy15447        140 LEETALYSFGFSTSASAIAAYV---------KRN-D-AVFVDENINFAIQTGLIASR------------CKVQYFKHNNM  196 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~---------~~g-d-~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~  196 (457)
                      .+.+++++||++|+..+++++.         .+| | +|+.+..+|+.+..++..++            ..+..++++|+
T Consensus       133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~  212 (439)
T 2oat_A          133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDL  212 (439)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCH
T ss_pred             CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCH
Confidence            9999999999999999998864         234 4 45556677887777777665            46788889999


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY  271 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~  271 (457)
                      +++++.++.          +++++|++||+++++|.+.    ++++|+++|++||++||+||+|+ | +|++|.++ .++
T Consensus       213 ~~le~~l~~----------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~-g-~g~~g~~~~~~~  280 (439)
T 2oat_A          213 PALERALQD----------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT-G-LARTGRWLAVDY  280 (439)
T ss_dssp             HHHHHHTTS----------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGG
T ss_pred             HHHHHHhCC----------CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-C-CccCCcchhHHH
Confidence            999998852          3568999999999999876    59999999999999999999994 3 55666654 377


Q ss_pred             cCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447        272 FGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK  348 (457)
Q Consensus       272 ~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~  348 (457)
                      +++.|   |++  |+||++|+.   +|++++++++++.+....++.+|  +.+|++++++.++++.+++. ++.++++++
T Consensus       281 ~~~~~---Di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~aal~~~~~~-~~~~~~~~~  352 (439)
T 2oat_A          281 ENVRP---DIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTY--GGNPLGCRVAIAALEVLEEE-NLAENADKL  352 (439)
T ss_dssp             GTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSS--TTCHHHHHHHHHHHHHHHHT-THHHHHHHH
T ss_pred             hCCCC---cEE--EecccccCCCCCeEEEEECHHHHhccCCCCcccCC--CcCHHHHHHHHHHHHHHhhh-hHHHHHHHH
Confidence            78766   676  899999653   79999999988777544334444  45999999999999988764 588999999


Q ss_pred             HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC--cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS--DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI  426 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi  426 (457)
                      ++++++.|+++. .+.+... ++.+.++++.+...  .       ...++++.|+++||++.+..         .+++|+
T Consensus       353 ~~~l~~~L~~l~-~~~~~~~-~~~g~~~~v~l~~~~~~-------~~~~l~~~l~~~Gv~v~~~~---------~~~iRi  414 (439)
T 2oat_A          353 GIILRNELMKLP-SDVVTAV-RGKGLLNAIVIKETKDW-------DAWKVCLRLRDNGLLAKPTH---------GDIIRF  414 (439)
T ss_dssp             HHHHHHHHTTSC-TTTEEEE-EEETTEEEEEECCCSSC-------CHHHHHHHHHHTTEECCBSS---------SSEEEE
T ss_pred             HHHHHHHHHHhc-CCCcEEE-EeeeeEEEEEEecCccH-------HHHHHHHHHHHCCeEEecCC---------CCEEEE
Confidence            999999998842 1222111 34578888888654  2       34579999999999987632         478999


Q ss_pred             EecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        427 TCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +++..+|++|+++++++|++++++
T Consensus       415 ~~~~~~t~e~i~~~l~~l~~~l~~  438 (439)
T 2oat_A          415 APPLVIKEDELRESIEIINKTILS  438 (439)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ECccCCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998764

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=100.00  E-value=7.1e-42  Score=342.91  Aligned_cols=348  Identities=18%  Similarity=0.180  Sum_probs=263.6

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC-CccCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH-NYLSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~-~~l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .|+++++++|+++|+ ||++||||+++ ++++++ .||++.+|+.++++++...+   +.  ...+...+++++|++++|
T Consensus        47 ~~~~~~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~g  121 (433)
T 1z7d_A           47 IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICS---RA--FFSVPLGICERYLTNLLG  121 (433)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCC---TT--SEEHHHHHHHHHHHHHHT
T ss_pred             CCceEEeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCcc---CC--cCCHHHHHHHHHHHhhcC
Confidence            377889999999995 99999999884 456666 68999999999998854321   11  257889999999999999


Q ss_pred             CCcEEEecccHHHHHHHHHhhc---------CCC-CEEEE-eCcccHHHHHHHHhcC------------CeEEEecCCCH
Q psy15447        140 LEETALYSFGFSTSASAIAAYV---------KRN-DAVFV-DENINFAIQTGLIASR------------CKVQYFKHNNM  196 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~---------~~g-d~v~~-~~~~h~~~~~~~~~~g------------~~~~~~~~~d~  196 (457)
                      .+.+++++||++|+..+++++.         .+| +.|++ +..+|+.+..++.+.+            ..+..++++|+
T Consensus       122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~  201 (433)
T 1z7d_A          122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDL  201 (433)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCH
T ss_pred             CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCH
Confidence            9999999999999999998753         245 65555 5567777666665554            35677888999


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY  271 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~  271 (457)
                      +++++.++.          +++++|++||+++++|.+.    ++++|+++|++||++||+||+|+ | +|++|.++ .++
T Consensus       202 ~~le~~l~~----------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~g~~g~~~~~~~  269 (433)
T 1z7d_A          202 EALEEELKD----------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-G-LGRTGKLLCVHH  269 (433)
T ss_dssp             HHHHHHHTS----------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSGGGG
T ss_pred             HHHHHHhCC----------CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-C-CCcCCcchhhHh
Confidence            999999852          3568999999999999875    58999999999999999999996 3 55656554 367


Q ss_pred             cCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHH
Q psy15447        272 FGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREK  348 (457)
Q Consensus       272 ~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~  348 (457)
                      +++.|   |++  |+||++|+.   +|++++++++++.+....+..+|  +.+|++++++.++++.+++. ++.++++++
T Consensus       270 ~~~~~---di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~~~~t~--~~~~~~~aaa~aal~~~~~~-~~~~~~~~~  341 (433)
T 1z7d_A          270 YNVKP---DVI--LLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTY--GGNPLAASICVEALNVLINE-KLCENAEKL  341 (433)
T ss_dssp             GTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTT--TTCHHHHHHHHHHHHHHHHT-THHHHHHHH
T ss_pred             cCCCC---CEE--EECccccCCCCCeEEEEECHHHHhhhccccccccC--CCCHHHHHHHHHHHHHHHhc-cHHHHHHHH
Confidence            77766   676  899999743   78999999988776543333333  46999999999999988764 578999999


Q ss_pred             HHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE
Q psy15447        349 CNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI  426 (457)
Q Consensus       349 ~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi  426 (457)
                      ++++++.|+++. ..+.+... ++.+.++++.+... .       ...++++.|+++||++.+..         .+++|+
T Consensus       342 ~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~-------~~~~~~~~l~~~Gv~v~~~~---------~~~iRi  404 (433)
T 1z7d_A          342 GGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNELV-------NVLDICLKLKENGLITRDVH---------DKTIRL  404 (433)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTTTC-------CHHHHHHHHHHTTEECCEET---------TTEEEE
T ss_pred             HHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccChh-------HHHHHHHHHHHCCeEEecCC---------CCEEEE
Confidence            999999998731 12222222 34578888888653 2       34579999999999987642         478999


Q ss_pred             EecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        427 TCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++..+|++|+++++++|+++++++.
T Consensus       405 ~~~~~~t~e~i~~~l~~l~~~l~~~~  430 (433)
T 1z7d_A          405 TPPLCITKEQLDECTEIIVKTVKFFD  430 (433)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             ECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999988764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=100.00  E-value=4.5e-42  Score=346.24  Aligned_cols=352  Identities=11%  Similarity=0.058  Sum_probs=275.4

Q ss_pred             CCceeeecCCCcEEE-E-CCe--eeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH
Q psy15447         62 SSKYVVDQKSGYIVN-I-NGI--PCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI  134 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~-~-~G~--~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l  134 (457)
                      ..|+++++++|.++| . |||  +||||+++   +++|+ +||+|.+|+.++++++++.+    ...+..+...+|+++|
T Consensus        53 ~~~~~~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~L~e~l  127 (457)
T 3tfu_A           53 VSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGH-GHPALDQALTTQLRVMNHVM----FGGLTHEPAARLAKLL  127 (457)
T ss_dssp             SCCEEEEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCC----SSSEECHHHHHHHHHH
T ss_pred             CCCceEEeeecCEEEEccCCCeeEEEECCCcHhhhccCC-CCHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHH
Confidence            358899999999999 7 999  99999885   56676 58999999999999865432    1123578899999999


Q ss_pred             HhhcC--CCcEEEecccHHHHHHHHHhhcC-------CC--CEEEEeCcccHHHHHHHHhcC-------------CeEEE
Q psy15447        135 ASFMG--LEETALYSFGFSTSASAIAAYVK-------RN--DAVFVDENINFAIQTGLIASR-------------CKVQY  190 (457)
Q Consensus       135 a~~~g--~~~~i~~~sG~~a~~~ai~a~~~-------~g--d~v~~~~~~h~~~~~~~~~~g-------------~~~~~  190 (457)
                      +++++  .+++++++||++|++.|++++..       +|  ++|..+..+|+.+..++.+++             ..+..
T Consensus       128 a~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (457)
T 3tfu_A          128 VDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVF  207 (457)
T ss_dssp             HHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEE
T ss_pred             HHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceE
Confidence            99995  56789999999999999988753       33  456667888888777766632             11222


Q ss_pred             ecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEec-CCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCccc
Q psy15447        191 FKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG-VYMNSADICP----LKDILSLRSKYQARIFVDESVSF  258 (457)
Q Consensus       191 ~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~-v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~  258 (457)
                      ++.       +|+++|++.+++..        +++++|++|| +++++|.+.|    +++|+++|++||++||+||+|+.
T Consensus       208 ~~~p~~~~~~~d~~~le~~l~~~~--------~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g  279 (457)
T 3tfu_A          208 APQVPRDYDPAYSAAFEAQLAQHA--------GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATG  279 (457)
T ss_dssp             ECCCCSSCCHHHHHHHHHHHHHHG--------GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             ecCCCcccCHHHHHHHHHHHHhCC--------CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccC
Confidence            222       47889999997642        4678999999 9999998876    99999999999999999999862


Q ss_pred             ccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-CC--cceecCCCcHHHHHHHHHH
Q psy15447        259 GTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-GS--GYCFSASLPPFLAVAANKA  331 (457)
Q Consensus       259 g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~aaa~a~  331 (457)
                        +|++|.+ ..+++++.|   |++  ||||++++   +.|++++++++++.+... ..  .+..+.+.+|++|++++++
T Consensus       280 --~gr~G~~~a~~~~~~~p---dii--t~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aa  352 (457)
T 3tfu_A          280 --FGRTGALFAADHAGVSP---DIM--CVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVAS  352 (457)
T ss_dssp             --TTTTSSSSTHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHH
T ss_pred             --CccccchhHhHhcCCCc---eEE--EEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHH
Confidence              3444544 347788876   676  89999964   468999999999988532 11  1223445699999999999


Q ss_pred             HHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc
Q psy15447        332 LHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS  411 (457)
Q Consensus       332 l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~  411 (457)
                      |+.++++ ++.++++++.+++++.|+++...+++... ++.+.++++.+..+.       ...++++.|+++||++++. 
T Consensus       353 L~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~~~~-------~~~~~~~~l~~~Gv~v~~~-  422 (457)
T 3tfu_A          353 VELLLGQ-DWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECDRPV-------DLAVATPAALDRGVWLRPF-  422 (457)
T ss_dssp             HHHHHTS-CHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEESSCC-------CHHHHHHHHHHTTEECCCB-
T ss_pred             HHHHhhh-HHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEECCcc-------cHHHHHHHHHHCCeEEEec-
Confidence            9988654 58899999999999999885434555443 456788888887654       3567999999999998764 


Q ss_pred             cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        412 HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       412 ~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                               .+++||+|++.+|++|+++++++|+++++++.
T Consensus       423 ---------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~  454 (457)
T 3tfu_A          423 ---------RNLVYAMPPYICTPAEITQITSAMVEVARLVG  454 (457)
T ss_dssp             ---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred             ---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence                     37899999999999999999999999998764

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=6.2e-41  Score=338.87  Aligned_cols=363  Identities=14%  Similarity=0.102  Sum_probs=272.2

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++++ ||++||||+++   +++|++ ||+|.+|+.+++++....+   ....+..+...+|+++|++++
T Consensus        33 ~p~~~~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~  108 (460)
T 3gju_A           33 PTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYG-RQKIADAIATQAKNLAYYH---AYVGHGTEASITLAKMIIDRA  108 (460)
T ss_dssp             CCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHHSCCC---CCTTCCCHHHHHHHHHHHHHS
T ss_pred             CceEEEEeeccEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccccc---cccccCCHHHHHHHHHHHhhC
Confidence            358999999999995 99999999886   556664 8999999999999865432   223457788999999999987


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhcC---------CCCEEEEeCcccHHHHHHHHhcCCe------------EEEec---
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYVK---------RNDAVFVDENINFAIQTGLIASRCK------------VQYFK---  192 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~~---------~gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~---  192 (457)
                      +  .+++++++||++|++.++++++.         +.++|+.+..+|+.+..+..+.+..            +..++   
T Consensus       109 ~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  188 (460)
T 3gju_A          109 PKGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPY  188 (460)
T ss_dssp             CTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCC
T ss_pred             CCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCc
Confidence            4  56788999999999999998763         3345556777888887777765431            23222   


Q ss_pred             ---CCC------------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        193 ---HNN------------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       193 ---~~d------------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                         ++|            +++|++.+++..       ++++++|++||+++++|.+.|    +++|+++|++||++||+|
T Consensus       189 ~~~~~~~g~~~~~~~~~~~~~le~~i~~~~-------~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D  261 (460)
T 3gju_A          189 YFRRTDRSMSEEQFSQHCADKLEEMILAEG-------PETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVAD  261 (460)
T ss_dssp             GGGCSCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             cccCCccccChhHHHHHHHHHHHHHHHhcC-------CCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence               243            688888887533       146789999999999998776    999999999999999999


Q ss_pred             cCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhh-----CCcceecCCCcHHH
Q psy15447        254 ESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLS-----GSGYCFSASLPPFL  324 (457)
Q Consensus       254 Ea~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  324 (457)
                      |+|+ +|+.|.  .+..+++++.|   |++  ||||++++   +.|++++++++++.+...     ...+..+.+.+|++
T Consensus       262 Ev~~g~gr~g~--~~~~~~~~~~p---di~--t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~  334 (460)
T 3gju_A          262 EVVTGFGRLGT--MFGSDHYGIKP---DLI--TIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPIC  334 (460)
T ss_dssp             CTTTTTTTTSS--SCHHHHHTCCC---SEE--EECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHH
T ss_pred             ccccCCCcccc--cchHhhcCCCC---Cee--eeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHH
Confidence            9987 544442  33457788876   666  79999965   348999999999988532     11223344569999


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDM  399 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~  399 (457)
                      +++++++|+.+++. ++.++++++.+++++.|.+. ...+.+... ++.+.++++.+..+...    ........++++.
T Consensus       335 ~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (460)
T 3gju_A          335 VAAGVANLELIDEM-DLVTNAGETGAYFRAELAKAVGGHKNVGEV-RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATA  412 (460)
T ss_dssp             HHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeeEEEEEEEccCccccccccchHHHHHHHHHH
Confidence            99999999988664 47888888888888887432 223344433 44577888877643210    0011135678999


Q ss_pred             HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      |+++||++++..        ..+++||+|++.+|++|+++++++|+++++++..
T Consensus       413 l~~~Gv~v~~~~--------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  458 (460)
T 3gju_A          413 LAASGVIGRAMP--------QGDILGFAPPLCLTREQADIVVSKTADAVKSVFA  458 (460)
T ss_dssp             HHHTTEECEECS--------SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHCCeEEecCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999988754        1479999999999999999999999999987754

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=8.4e-41  Score=337.80  Aligned_cols=375  Identities=13%  Similarity=0.098  Sum_probs=269.6

Q ss_pred             CCCCCcccccc--ccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCccc
Q psy15447         49 EPIVSKAEKFK--DVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYG  122 (457)
Q Consensus        49 ~~~~~~~~~~~--~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g  122 (457)
                      ..+|++.+...  ....|+++++++|.++++ ||++||||+++   +.+|++ ||+|.+|+.+++++...+++   ...+
T Consensus        16 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~~---~~~~   91 (459)
T 4a6r_A           16 AHHLHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYG-RKDFAEAARRQMEELPFYNT---FFKT   91 (459)
T ss_dssp             ------------------CCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCSCCCT---TSSS
T ss_pred             hhccCCccccccccccCCeeEEEeecCEEEECCCCEEEECCCchhcccCCCC-CHHHHHHHHHHHHhcccccc---cccc
Confidence            34444444322  123578999999999995 99999999875   456664 89999999999998653222   2234


Q ss_pred             ChHHHHHHHHHHHhhcC--CCcEEEecccHHHHHHHHHhhcC--------CCC-EEEEeCcccHHHHHHHHhcCC-----
Q psy15447        123 TNVVHLDLENDIASFMG--LEETALYSFGFSTSASAIAAYVK--------RND-AVFVDENINFAIQTGLIASRC-----  186 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~ai~a~~~--------~gd-~v~~~~~~h~~~~~~~~~~g~-----  186 (457)
                      ..+...+|+++|+++++  .+++++++||++|++.++++++.        +++ +|+.+..+|+.+..+..+.+.     
T Consensus        92 ~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~  171 (459)
T 4a6r_A           92 THPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHE  171 (459)
T ss_dssp             CCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC-
T ss_pred             CCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhcc
Confidence            68899999999999985  56889999999999999998864        344 555677788877766666542     


Q ss_pred             -------eEEEec--C----C---C--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHH
Q psy15447        187 -------KVQYFK--H----N---N--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKD  238 (457)
Q Consensus       187 -------~~~~~~--~----~---d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~  238 (457)
                             .+..++  .    +   |        +++|++.+++..       ++++++|++||+++++|.+.|    +++
T Consensus       172 ~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~-------~~~~~~vi~ep~~~~~G~~~~~~~~l~~  244 (459)
T 4a6r_A          172 QGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIG-------ADKVAAFVGEPIQGAGGVIVPPATYWPE  244 (459)
T ss_dssp             --CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTCBCCCTTHHHH
T ss_pred             ccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcC-------CCCEEEEEECCccCCCCcccCCHHHHHH
Confidence                   222333  1    2   2        788888887543       146789999999999999887    999


Q ss_pred             HHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC-c
Q psy15447        239 ILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS-G  313 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~-~  313 (457)
                      |+++|++||++||+||+|+ +|+.|.  .+..+++++.|   |++  ||||++++.+   |++++++++++.+..... .
T Consensus       245 l~~l~~~~~~llI~DEv~~g~gr~G~--~~~~~~~~~~p---di~--t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~  317 (459)
T 4a6r_A          245 IERICRKYDVLLVADEVICGFGRTGE--WFGHQHFGFQP---DLF--TAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFN  317 (459)
T ss_dssp             HHHHHHHTTCEEEEECTTTTTTTTSS--SSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHHHHHHHCTTH
T ss_pred             HHHHHHHcCCEEEEeccccCCCcccc--cchHhhcCCCC---Cee--ehhhhhcCCCCCccceeeCHHHHHHhhcCCCcc
Confidence            9999999999999999986 544442  23457788876   666  7999997543   899999999998863211 1


Q ss_pred             ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHH-HHHHHHHHHh-hcccccCCeEEeccCCCCeEEEEecCCcch----H
Q psy15447        314 YCFSASLPPFLAVAANKALHLLKANPSLLTKLR-EKCNTMHSLL-SQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----V  387 (457)
Q Consensus       314 ~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~-~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~  387 (457)
                      ...+.+.+|+++++++++|+.++++ ++.++++ ++.+++++.| +.+...+.+... ++.+.++++.+..+...    .
T Consensus       318 ~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  395 (459)
T 4a6r_A          318 HGFTYSGHPVCAAVAHANVAALRDE-GIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-RGVGMVQAFTLVKNKAKRELFP  395 (459)
T ss_dssp             HHHHHCSCHHHHHHHHHHHHHHHHT-CHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECSBTTTTBCCS
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCcccccccc
Confidence            1223345999999999999988664 4788888 8888888888 553333444443 45577888877543210    0


Q ss_pred             HHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        388 ASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .......++++.|+++||++++.+          +++||+|++.+|++|+++++++|+++++++.+
T Consensus       396 ~~~~~~~~~~~~l~~~Gv~v~~~g----------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  451 (459)
T 4a6r_A          396 DFGEIGTLCRDIFFRNNLIMRACG----------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQ  451 (459)
T ss_dssp             STTHHHHHHHHHHHHTTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHCCeEEecCC----------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            011135678999999999998642          78999999999999999999999999887643

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=100.00  E-value=1.1e-40  Score=335.87  Aligned_cols=361  Identities=13%  Similarity=0.095  Sum_probs=259.5

Q ss_pred             CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      ..|+++++++|.++|+ ||++||||+++   +++|+. ||+|.+|+.+++++....+    ...+..+...+|+++|+++
T Consensus        25 ~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~----~~~~~~~~~~~la~~l~~~   99 (448)
T 3dod_A           25 ENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHR-KKELDDAIKKQLGKIAHST----LLGMTNVPATQLAETLIDI   99 (448)
T ss_dssp             HSCCEEEEEEBTEEEETTSCEEEETTHHHHTCSSCBS-CHHHHHHHHHHHTTCSCCC----CSSSEEHHHHHHHHHHHHH
T ss_pred             CCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhccCcc----ccccCCHHHHHHHHHHHHh
Confidence            3588999999999995 99999999874   567775 8999999999998754321    1234678899999999999


Q ss_pred             cC--CCcEEEecccHHHHHHHHHhhcC----CC----CEEE-EeCcccHHHHHHHHhcCCe------------EEEecCC
Q psy15447        138 MG--LEETALYSFGFSTSASAIAAYVK----RN----DAVF-VDENINFAIQTGLIASRCK------------VQYFKHN  194 (457)
Q Consensus       138 ~g--~~~~i~~~sG~~a~~~ai~a~~~----~g----d~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~  194 (457)
                      ++  .+++++++||++|++.|++++..    +|    |.|+ .+..+|+.+..+..+.+..            +..++.+
T Consensus       100 ~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (448)
T 3dod_A          100 SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP  179 (448)
T ss_dssp             SCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC
T ss_pred             CCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC
Confidence            84  56889999999999999998754    33    5554 5566677776666555422            2233333


Q ss_pred             ----------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC-CCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        195 ----------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY-MNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       195 ----------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~-~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                                      |+++|++++++..        +++++|++||++ +++|.+.|    +++|+++|++||++||+|
T Consensus       180 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~D  251 (448)
T 3dod_A          180 YVYRSESGDPDECRDQCLRELAQLLEEHH--------EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVD  251 (448)
T ss_dssp             CCTTSSSCCHHHHHHHHHHHHHHHHHHHG--------GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             ccccCCccchhhhhHHHHHHHHHHHHhCC--------CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEe
Confidence                            3788999987432        467899999999 99998876    999999999999999999


Q ss_pred             cCcc-cccccCCCCc-cccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh---hC--CcceecCCCcHH
Q psy15447        254 ESVS-FGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL---SG--SGYCFSASLPPF  323 (457)
Q Consensus       254 Ea~~-~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~---~~--~~~~~~~~~~~~  323 (457)
                      |+|+ +|+.   |.. ..+++++.|   |++  ||||++|+   +.|++++++++++.+..   ..  ....++.+.+|+
T Consensus       252 Ev~~g~g~~---g~~~a~~~~~~~~---di~--t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~  323 (448)
T 3dod_A          252 EVATGFGRT---GKMFACEHENVQP---DLM--AAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQL  323 (448)
T ss_dssp             CTTTTTTTT---SSSSGGGGGTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHH
T ss_pred             ccccCCCcc---cchhhhhhcCCCC---CEE--EecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHH
Confidence            9987 4444   443 457788876   565  79999963   44889999999988754   11  112234456999


Q ss_pred             HHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHHHHHHHHHHHH
Q psy15447        324 LAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VASKKLLQTICDM  399 (457)
Q Consensus       324 ~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~  399 (457)
                      ++++++++|+.+++. ++.++++++.+++++.|+++...+.+... ++.+.++++.+..+...    ........++++.
T Consensus       324 ~~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (448)
T 3dod_A          324 GCAVALENLALFESE-NIVEQVAEKSKKLHFLLQDLHALPHVGDI-RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLK  401 (448)
T ss_dssp             HHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EeeeEEEEEEEccCcccccccchhhHHHHHHHHH
Confidence            999999999988664 57889999999998888763223333332 34577888887653210    0000013678999


Q ss_pred             HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCCC
Q psy15447        400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQPL  455 (457)
Q Consensus       400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~~  455 (457)
                      |+++||++.+.          .+++||+|++.+|++|+++++++|+++++++...+
T Consensus       402 l~~~Gv~~~~~----------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~  447 (448)
T 3dod_A          402 MRELGMLTRPL----------GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTSLE  447 (448)
T ss_dssp             HHHTTEECCEE----------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHCCcEEecc----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence            99999998764          27899999999999999999999999998875443

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=2.1e-40  Score=333.10  Aligned_cols=378  Identities=13%  Similarity=0.053  Sum_probs=284.7

Q ss_pred             hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhcC
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKNG  111 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~  111 (457)
                      .+++.+..+++.+.+...        ..|+++++++|.+++ .+|++|+||+++.+   +|+ .||++.+++.++++++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~   76 (439)
T 3dxv_A            6 KALYDRDGAAIGNLQKLR--------FFPLAISGGRGARLIEENGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANPA   76 (439)
T ss_dssp             CCHHHHHHHHBCGGGCCC--------SSCCEEEEEEBTEEEETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHhccCccCC--------CCCceEEEeeeCEEEeCCCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhcc
Confidence            455666666665544432        157899999999999 59999999999876   666 58999999999998863


Q ss_pred             CCCCCCCCcccChHHHHHHHHHHHhhc--CC-CcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        112 VGSCGPRGFYGTNVVHLDLENDIASFM--GL-EETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       112 ~~~~~~~~~~g~~~~~~~l~~~la~~~--g~-~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      ..    ....+..+.+.+++++|++++  +. ++++++++|++|+..++++   +.+++++|+.+..+|+.+..++.+.+
T Consensus        77 ~~----~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~  152 (439)
T 3dxv_A           77 GA----TILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSG  152 (439)
T ss_dssp             CS----CSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC--
T ss_pred             Cc----cccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcC
Confidence            21    223457889999999999998  55 6889999999999999987   45677788888889988887776665


Q ss_pred             CeE--------------EEecCC----------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hH
Q psy15447        186 CKV--------------QYFKHN----------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LK  237 (457)
Q Consensus       186 ~~~--------------~~~~~~----------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~  237 (457)
                      ...              ..++++          |+++|++.+++..       ++++++|+++|+++++|.+.|    ++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~~~~~~vi~~p~~~~~G~~~~~~~~l~  225 (439)
T 3dxv_A          153 HSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVP-------AGSIGAAFIEPIQSDGGLIVPPDGFLR  225 (439)
T ss_dssp             -----------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSC-------TTCEEEEEECSSBSTTTSBCCCTTHHH
T ss_pred             CCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcC-------CCCEEEEEEccccCCCCCccCCHHHHH
Confidence            432              344554          6899999985321       256789999999999999988    99


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY  314 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~  314 (457)
                      +|+++|++||++||+||+|+ | +|++|. +..+++++.|   |++  ||||++|+  +.|++++++++++.+...... 
T Consensus       226 ~l~~l~~~~~~~li~DE~~~-g-~g~~g~~~~~~~~~~~~---di~--s~sK~~~~G~riG~~~~~~~~~~~~~~~~~~-  297 (439)
T 3dxv_A          226 KFADICRAHGILVVCDEVKV-G-LARSGRLHCFEHEGFVP---DIL--VLGKGLGGGLPLSAVIAPAEILDCASAFAMQ-  297 (439)
T ss_dssp             HHHHHHHHTTCEEEEECTTT-C-TTTTSSSSGGGGTTCCC---SEE--EECGGGGTTSCCEEEEEEHHHHTSCSSSSCC-
T ss_pred             HHHHHHHHcCCEEEEecccc-C-CCcCchhhHHHhcCCCC---CEE--EEcchhcCCcceEEEEECHHHHhhhcCCCcC-
Confidence            99999999999999999996 2 455555 3446777765   666  89999974  348999999988877644333 


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch-HHHHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKL  392 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~  392 (457)
                       .+. .+|+++++++++++.+++ +++.++++++.+++++.|+++. ..+.+... ++.+.++++.+..+... ......
T Consensus       298 -~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  373 (439)
T 3dxv_A          298 -TLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMELVCDRQSREPARAE  373 (439)
T ss_dssp             -TTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTTTEECHHH
T ss_pred             -CCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCCHHH
Confidence             333 699999999999998876 4578899999999999887632 12333332 44577888776321100 001125


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..++++.|+++||++.+...       ..+++||+++..+|++|+++++++|+++++++.
T Consensus       374 ~~~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  426 (439)
T 3dxv_A          374 TAKLIYRAYQLGLVVYYVGM-------NGNVLEFTPPLTITETDIHKALDLLDRAFSELS  426 (439)
T ss_dssp             HHHHHHHHHHHTEECEEEST-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHCCcEEeecCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            66799999999999987642       247999999999999999999999999998763

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-39  Score=326.82  Aligned_cols=362  Identities=12%  Similarity=0.082  Sum_probs=269.1

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.+|++ ||++||||+++   +++|+. ||+|.+|+.+++++.++.+     ..+..+...+|+++|++++
T Consensus        31 ~p~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~A~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~~~  104 (452)
T 3n5m_A           31 STTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYG-RKELAEAAYKQLQTLSYFP-----MSQSHEPAIKLAEKLNEWL  104 (452)
T ss_dssp             GCCEEEEEEBTEEEETTCCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHTTCCCCC-----TTSEEHHHHHHHHHHHHHH
T ss_pred             CCceEEEeeeCEEEECCCCEEEECCcchhhccCCCC-CHHHHHHHHHHHHhcCCcc-----cccCCHHHHHHHHHHHHhC
Confidence            578999999999994 99999999887   677775 8999999999998854411     2346789999999999998


Q ss_pred             CCC-cEEEecccHHHHHHHHHhhc-----C---CCC-EEEEeCcccHHHHHHHHhcCCe------------EEEec----
Q psy15447        139 GLE-ETALYSFGFSTSASAIAAYV-----K---RND-AVFVDENINFAIQTGLIASRCK------------VQYFK----  192 (457)
Q Consensus       139 g~~-~~i~~~sG~~a~~~ai~a~~-----~---~gd-~v~~~~~~h~~~~~~~~~~g~~------------~~~~~----  192 (457)
                      +.+ .+++++||++|++.++++++     .   +++ +|+.+..+|+....+..+.+..            ....+    
T Consensus       105 ~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (452)
T 3n5m_A          105 GGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDC  184 (452)
T ss_dssp             TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCT
T ss_pred             CCCceEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcc
Confidence            743 37888899999999999877     3   444 5555666788776666655421            22222    


Q ss_pred             ----CCC---------HHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        193 ----HNN---------MQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       193 ----~~d---------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                          ++|         +++|++.+++..       ++++++|++||+ +| +|.+.|    +++|+++|++||++||+||
T Consensus       185 ~~~~~~~~~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DE  256 (452)
T 3n5m_A          185 YRMPGIERENIYDVECVKEVDRVMTWEL-------SETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDE  256 (452)
T ss_dssp             TTSTTTTTSCGGGCHHHHHHHHHHHHHC-------GGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred             ccCccCCchhhHHHHHHHHHHHHHHhcC-------CCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEec
Confidence                345         899999997322       146789999999 89 998887    9999999999999999999


Q ss_pred             Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHh--hCCc--ceecCCCcHHHHH
Q psy15447        255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRL--SGSG--YCFSASLPPFLAV  326 (457)
Q Consensus       255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~a  326 (457)
                      +|+ +|+.|.  .+..+++++.|   |++  ||||++|+   +.|++++++++++.+..  ....  +..+.+.+|++++
T Consensus       257 v~~g~g~~g~--~~~~~~~~~~~---di~--t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~a  329 (452)
T 3n5m_A          257 VICGFGRTGK--AFGFMNYDVKP---DII--TMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACA  329 (452)
T ss_dssp             TTTTTTTTSS--SSGGGGTTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHH
T ss_pred             chhCCCcccc--cchhhhcCCCC---CEE--eecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHH
Confidence            986 544432  23457788876   666  79999975   22899999999888743  1111  2234456999999


Q ss_pred             HHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcch--HHHHHHHHHHHHHHHHc
Q psy15447        327 AANKALHLLKANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDE--VASKKLLQTICDMCIQA  403 (457)
Q Consensus       327 aa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~  403 (457)
                      +++++++.+++. ++.++++++.+++++.|+++ ...+.+... ++.+.++++.+..+...  ........++++.|+++
T Consensus       330 aa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~  407 (452)
T 3n5m_A          330 LALKNLEIIENE-NLIERSAQMGSLLLEQLKEEIGEHPLVGDI-RGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEK  407 (452)
T ss_dssp             HHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHC
Confidence            999999988664 57899999999999988763 123344333 45677777766432110  00011345789999999


Q ss_pred             CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        404 GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       404 Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ||++.+..++.   +...+++||+|+..+|++|+++++++|++++++
T Consensus       408 Gv~~~~~~~~~---~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          408 GLIIGRNGMTT---AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             TEECEECTTSS---TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             CcEEeecCccc---CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            99999876542   233689999999999999999999999998753

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=1.7e-39  Score=327.33  Aligned_cols=384  Identities=14%  Similarity=0.105  Sum_probs=278.1

Q ss_pred             hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG  111 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~  111 (457)
                      ++++.+...+..+.++..        ..|+++++++|.+||+ ||++||||+++   +++|+. ||+|.+|+.+++++..
T Consensus        27 ~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~~~~   97 (453)
T 4ffc_A           27 SGALAERRRAAVSAGVGS--------TAPVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGAS-HPAVAAAIADQATHFT   97 (453)
T ss_dssp             HHHHHHHHHHHBCTTTCC--------SCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHhcCCCcCC--------CCCceEEeeecCEEEeCCCCEEEEcCCCcccCcCCCC-CHHHHHHHHHHHHhcc
Confidence            445555555554544431        2578899999999995 99999999885   456664 8999999999999853


Q ss_pred             CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      ..    ....+..+...+|+++|+++++   .+++++++||++|++.|++...   ++.++|+.+..+|+.+..+..+.+
T Consensus        98 ~~----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~  173 (453)
T 4ffc_A           98 HT----CFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTA  173 (453)
T ss_dssp             CC----TTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred             cc----ccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcC
Confidence            21    1223468889999999999986   4578999999999999998764   455667778888988877777654


Q ss_pred             C-------------eEEEecCC----C------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHH
Q psy15447        186 C-------------KVQYFKHN----N------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKD  238 (457)
Q Consensus       186 ~-------------~~~~~~~~----d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~  238 (457)
                      .             .+..++.+    |      .+.++..++......   .++++++|++||+++++|.+.|    +++
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i---~~~~~aavi~ep~~~~gG~~~~~~~~l~~  250 (453)
T 4ffc_A          174 KSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLAT  250 (453)
T ss_dssp             CCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHT---CGGGEEEEEECSSBTTTTSBCCCTTHHHH
T ss_pred             CCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhc---CCCCEEEEEEcCCCCCCCcccCCHHHHHH
Confidence            3             34444443    3      344433332211100   0146789999999999898877    999


Q ss_pred             HHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce
Q psy15447        239 ILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~  315 (457)
                      |+++|++||++||+||+|+ +|+.|.  .+..+++++.|   |++  ||||++|+  +.|++++++++++.+....+.. 
T Consensus       251 l~~l~~~~~~llI~DEv~~g~g~~g~--~~a~~~~~~~p---di~--t~sK~~~~G~~~G~~~~~~~i~~~~~~~~~~~-  322 (453)
T 4ffc_A          251 LTAWASENGVVFIADEVQTGFARTGA--WFASEHEGIVP---DIV--TMAKGIAGGMPLSAVTGRAELMDAVYAGGLGG-  322 (453)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHHTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTTSCTTSSCC-
T ss_pred             HHHHHHHcCCEEEEecCccCCCcccc--cchhhhcCCCc---chH--hhhhhhcCCcCeEEEEECHHHHhhhcccCcCC-
Confidence            9999999999999999986 544442  23457788876   665  79999965  4489999999988776544333 


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQ  394 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  394 (457)
                       +.+.+|+++++++++++.+++. ++.++++++.+++++.|+++. ..+.+... ++.+.++++.+..............
T Consensus       323 -t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  399 (453)
T 4ffc_A          323 -TYGGNPVTCAAAVAALGVMREL-DLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAMLAIEIVKPGTLEPDAALTK  399 (453)
T ss_dssp             -SSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTEEEEEEBCTTSCCBCHHHHH
T ss_pred             -CCCcCHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceEEEEEEecCcccCCCHHHHH
Confidence             3345999999999999988654 578899999999988887631 12344332 3457888888754110011122567


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ++.+.|+++||++.+...       ..+++||++++.+|++|+++++++|+++++++.+
T Consensus       400 ~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  451 (453)
T 4ffc_A          400 SIAAEALSQGVLILTCGT-------FGNVIRLLPPLVIGDDLLDEGITALSDIIRAKAS  451 (453)
T ss_dssp             HHHHHHHHTTEECCEECT-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHhCCCEEecCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999987542       2479999999999999999999999999987653

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=2.8e-39  Score=325.78  Aligned_cols=378  Identities=13%  Similarity=0.113  Sum_probs=276.0

Q ss_pred             hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG  111 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~  111 (457)
                      ++++.+..++..+.++..        ..|+++++++|.+||+ ||++||||+++   +.+|+. ||+|.+|+.+++++..
T Consensus        24 ~~~~~~~~~~~~~~~~~~--------~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~-~p~v~~A~~~~~~~~~   94 (451)
T 3oks_A           24 SQALIDRKGTAVARGVGT--------TMPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNS-APKVVEAVRSQVGDFT   94 (451)
T ss_dssp             HHHHHHHHHHHBCTTBCC--------SCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTT-CHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHhhccCCcCC--------CCCceEEEeecCEEEECCCCEEEEcCCCccccccCCC-CHHHHHHHHHHHHhcc
Confidence            445555555555544331        2578899999999995 99999999875   446654 8999999999998753


Q ss_pred             CCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        112 VGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       112 ~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      +.    ....+..+...+|+++|+++++   .+++++++||++|++.|++...   ++..+|..+..+|+.+..++.+.+
T Consensus        95 ~~----~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~  170 (451)
T 3oks_A           95 HT----CFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTA  170 (451)
T ss_dssp             CC----TTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCC
T ss_pred             cc----cCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcC
Confidence            21    1123467889999999999986   4578999999999999998764   444566677888988877777654


Q ss_pred             C-------------eEEEecCC------------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        186 C-------------KVQYFKHN------------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       186 ~-------------~~~~~~~~------------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      .             .+..++.+                  +++.+++.+++...      ++++++|++||+++++|.+.
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~------~~~~aavi~ep~~~~gG~~~  244 (451)
T 3oks_A          171 KVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIG------ADNLAAVVIEPIQGEGGFIV  244 (451)
T ss_dssp             CCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTC------GGGEEEEEECSSBTTTTCBC
T ss_pred             CCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcC------CCCEEEEEEcCCcCCCCccC
Confidence            2             34555544                  13334444443211      24678999999999999887


Q ss_pred             C----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHH
Q psy15447        235 P----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHH  307 (457)
Q Consensus       235 ~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~  307 (457)
                      |    +++|+++|++||++||+||+|+ +|+.|.  .+..+++++.|   |++  ||||++|+  +.|++++++++++.+
T Consensus       245 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~~~~~~~~~p---di~--t~sK~l~~G~~iG~v~~~~~~~~~~  317 (451)
T 3oks_A          245 PADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA--MFACEHEGIDP---DLI--VTAKGIAGGLPLSAVTGRAEIMDSP  317 (451)
T ss_dssp             CCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTTSSCEEEEEEHHHHTCS
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc--chhhhhcCCCC---Cee--eehhhhhCCcceEEEEECHHHHhhh
Confidence            7    9999999999999999999986 444432  23457788876   666  89999964  458999999998877


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      ....+.  .+.+.+|+++++++++++.+++. ++.++++++.+++++.|+++. ..+.+... ++.+.++++.+......
T Consensus       318 ~~~~~~--~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~  393 (451)
T 3oks_A          318 HVSGLG--GTYGGNPIACAAALATIETIESE-GLVARAQQIEKIMKDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAGTT  393 (451)
T ss_dssp             CTTSBC--CSSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTTSC
T ss_pred             cCCCcC--CCCCCCHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCccC
Confidence            544333  33456999999999999988664 588899999999998887631 12333332 34577888887541100


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ........++++.|+++||++.+...       ..+++||++++.+|++++++++++|++++++
T Consensus       394 ~~~~~~~~~~~~~l~~~Gv~v~~~~~-------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  450 (451)
T 3oks_A          394 EPDADLTKALCAGAHAAGVIVLSCGT-------YGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG  450 (451)
T ss_dssp             CBCHHHHHHHHHHHHHTTEECEEECT-------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHhCCcEEecCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence            01122567899999999999987542       2478999999999999999999999998763

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=2.2e-39  Score=321.11  Aligned_cols=344  Identities=15%  Similarity=0.146  Sum_probs=267.2

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++| .||++||||+++   +++|+ +||++.+++.+++++..+++.     .+..+.+.++++++++++
T Consensus        18 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~   91 (395)
T 3nx3_A           18 FDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGY-NHAKFNAKIKAQVDKLLHTSN-----LYYNENIAAAAKNLAKAS   91 (395)
T ss_dssp             CSCBEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-SCHHHHHHHHHHHTTCSCCCT-----TSBCHHHHHHHHHHHHHH
T ss_pred             CCceEEeeeeeEEEECCCCEEEECCCcHHhccCCC-CCHHHHHHHHHHHHhcccccc-----ccCCHHHHHHHHHHHHhc
Confidence            57889999999999 499999999987   45566 489999999999987654321     135788999999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc-------CCCCEEE-EeCcccHHHHHHHHhcC------------CeEEEecCCCHHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV-------KRNDAVF-VDENINFAIQTGLIASR------------CKVQYFKHNNMQH  198 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~-------~~gd~v~-~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~  198 (457)
                      |.+++++++||++|+..+++++.       .+++.|+ .+..+|+....+....+            ..+..++++|+++
T Consensus        92 ~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  171 (395)
T 3nx3_A           92 ALERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISS  171 (395)
T ss_dssp             TCSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHH
T ss_pred             CCCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHH
Confidence            99999999999999999998764       2345554 55666776655554443            4677888999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFG  273 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~  273 (457)
                      |++.++           +++++|+++++++++|.+.|    +++|+++|++||++||+||+|+ +|..|.  .+..++++
T Consensus       172 l~~~l~-----------~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~~~~~~~~  238 (395)
T 3nx3_A          172 VEKLVN-----------EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--FFAYEHAQ  238 (395)
T ss_dssp             HHTTCC-----------TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGGT
T ss_pred             HHHhcc-----------CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--chhHHhcC
Confidence            998874           35689999999999999977    9999999999999999999986 544432  22346677


Q ss_pred             CCCCCccEEEecCcccccC--cccEEEecHHH-HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYI-IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      +.+   |++  |+||++|+  +.|++++++++ ++.+....+..++  +.++++++++.++++.+++. ++.++++++.+
T Consensus       239 ~~~---d~~--t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~aal~~~~~~-~~~~~~~~~~~  310 (395)
T 3nx3_A          239 ILP---DIM--TSAKALGCGLSVGAFVINQKVASNSLEAGDHGSTY--GGNPLVCAGVNAVFEIFKEE-KILENVNKLTP  310 (395)
T ss_dssp             CCC---SEE--EECGGGTTTSCCEEEEECHHHHHHHSCTTCCSSCB--SCCHHHHHHHHHHHHHHHHT-THHHHHHHHHH
T ss_pred             CCC---CEE--EecccccCCCceEEEEEchhhhhhhcCCcccCCCC--CCCHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence            765   565  79999964  45899999988 7777544333333  45999999999999987653 57888888888


Q ss_pred             HHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        351 TMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       351 ~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      ++++.|++... .+.+... ++.+.++++.+....       ...++.+.|+++||++++..         .+++||+|+
T Consensus       311 ~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~l~~~Gi~v~~~~---------~~~iRi~~~  373 (395)
T 3nx3_A          311 YLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV-------KVAKVIQKCQENALLLISCG---------ENDLRFLPP  373 (395)
T ss_dssp             HHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-------CHHHHHHHHHHTTEECEEET---------TTEEEECCC
T ss_pred             HHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc-------hHHHHHHHHHHCCCEEecCC---------CCEEEEECC
Confidence            88888876321 2333332 345788888887643       35678999999999988653         479999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..+|++|+++++++|++++++
T Consensus       374 ~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          374 LILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999998764

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=2e-38  Score=317.88  Aligned_cols=366  Identities=14%  Similarity=0.093  Sum_probs=256.9

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.++|. ||++||||+++   +++|++ +|++.+|+.+++++....+.    ..+..+...+++++|++++
T Consensus        11 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~-~p~v~~a~~~~~~~~~~~~~----~~~~~~~~~~l~~~la~~~   85 (430)
T 3i4j_A           11 PYPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHG-RAEVGERMAAQAARLPFVHG----SQFSSDVLEEYAGRLARFV   85 (430)
T ss_dssp             CCCEEEEEEBTEEEETTSCEEEETTHHHHTCTTCBC-CHHHHHHHHHHHHHCCCCCT----TTCEEHHHHHHHHHHHHHT
T ss_pred             CCceEEeeecCEEEECCCCEEEECCCchhccccCCC-CHHHHHHHHHHHHhcccccc----cccCCHHHHHHHHHHHHhC
Confidence            578999999999995 99999999884   677775 89999999999988543221    2346788999999999998


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc--------CCCCEEEE-eCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV--------KRNDAVFV-DENINFAIQTGLIASRC--------------KVQYFKH  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~-~~~~h~~~~~~~~~~g~--------------~~~~~~~  193 (457)
                      +  .+++++++||++|+..++++++        ..++.|++ +..+|+.........+.              .+..++.
T Consensus        86 ~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (430)
T 3i4j_A           86 GLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK  165 (430)
T ss_dssp             TCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC
T ss_pred             CCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC
Confidence            6  4678889999999999998875        23555554 55566665544444332              3334444


Q ss_pred             C--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC-CCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cc
Q psy15447        194 N--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM-NSADICP----LKDILSLRSKYQARIFVDESVS-FG  259 (457)
Q Consensus       194 ~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~-~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g  259 (457)
                      +        |+++|++.+++..       ++++++|++||+++ ++|.+.+    +++|+++|++||++||+||+|+ +|
T Consensus       166 ~~~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~  238 (430)
T 3i4j_A          166 PDPARNGAEDAEGLRALLEREG-------PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMG  238 (430)
T ss_dssp             CCTTSCHHHHHTHHHHHHHHHC-------GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred             CcccchhhHHHHHHHHHHHhcC-------CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence            4        4589999987542       14678999999999 9998877    9999999999999999999986 54


Q ss_pred             cccCCCCcccccc-CCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHHH
Q psy15447        260 TLGSTGHGVTEYF-GVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       260 ~~g~~g~~~~~~~-~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l~  333 (457)
                      ..|.  .+..+++ ++.|   |++  ||||++|+   +.|++++++++++.+......  ...+.+.+|+++++++++|+
T Consensus       239 ~~g~--~~~~~~~~~~~~---di~--t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~  311 (430)
T 3i4j_A          239 RCGS--PLALSRWSGVTP---DIA--VLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD  311 (430)
T ss_dssp             TTSS--SSGGGGTTTCCC---SEE--EECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred             cccc--hhhhhhhcCCCC---cEE--EEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence            4442  2345667 7765   565  79999974   238999999999998764211  12334569999999999999


Q ss_pred             HHhhCcHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHH-H-HHHHHHHHHHHHHcCeeEecc
Q psy15447        334 LLKANPSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVA-S-KKLLQTICDMCIQAGFAITCP  410 (457)
Q Consensus       334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~~~~~~l~~~Gi~v~~~  410 (457)
                      .+++. ++.++++++.+++++.|+++. ..+++... ++.+.++++.+.+...... . ...+.++++.|+++||++++.
T Consensus       312 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~  389 (430)
T 3i4j_A          312 IVERE-DLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPG  389 (430)
T ss_dssp             HHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEC------------CHHHHHHHHHHTTEECC--
T ss_pred             HHHcc-cHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEec
Confidence            88663 578889999999888887632 13445443 3457788887753210000 0 012367899999999999876


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .++..  ...++++||++++.+|++++++++++|+++++++
T Consensus       390 ~~~~~--~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  428 (430)
T 3i4j_A          390 SGAEP--NGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV  428 (430)
T ss_dssp             -----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccC--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            43221  2235789999999999999999999999998865

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=7e-39  Score=321.57  Aligned_cols=382  Identities=16%  Similarity=0.175  Sum_probs=278.4

Q ss_pred             hhhHHHHHcccCCCCCCCccccccc-c-CCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHh
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKD-V-SSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~  109 (457)
                      ++++.+...+..|.+..++...... . ..|+++++++|.++|+ ||++||||+++.   ++|+ +||+|.+|+.+++.+
T Consensus         8 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~a~~~~~~~   86 (434)
T 3l44_A            8 SEALHKEALEHIVGGVNSPSRSFKAVGGGAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIITGH-AHPHITKAITTAAEN   86 (434)
T ss_dssp             HHHHHHHHHHHBGGGCSSGGGSSGGGTCSCCCCEEEEEBTEEEETTCCEEEECCGGGTTCSSCB-TCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCCCcCccccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHh
Confidence            5677777777777776544332221 1 3688999999999995 999999998864   4555 489999999999987


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhhcC--CCCEE-EEeCcccHHHHHHHHhcC
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAYVK--RNDAV-FVDENINFAIQTGLIASR  185 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~~~--~gd~v-~~~~~~h~~~~~~~~~~g  185 (457)
                      . ..      +++..+...+|+++|++++ +.+++++++||++|+..+++++..  +++.| +.+..+|+.+...+...+
T Consensus        87 ~-~~------~~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g  159 (434)
T 3l44_A           87 G-VL------YGTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAG  159 (434)
T ss_dssp             C-SC------CSSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC--
T ss_pred             C-cC------CCCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcC
Confidence            3 11      1235778899999999988 567889999999999999987653  44544 456666765443322222


Q ss_pred             -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                         ..+..++++|++++++++++..        +++++|++||+++++|.+.|    +++|+++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l  231 (434)
T 3l44_A          160 SGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWG--------HEVAAILVEPIVGNFGIVEPKPGFLEKVNEL  231 (434)
T ss_dssp             -----CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred             CcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCC--------CCEEEEEEcCCCCCCCCccCCHHHHHHHHHH
Confidence                               1566788899999999997643        46789999999999999987    9999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSA  318 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~  318 (457)
                      |++||++||+||+|+..+   +|. +..+++++.|   |++  |+||++|+  +.|++++++++++.+...... ...+.
T Consensus       232 ~~~~~illI~DEv~~g~~---~g~~~~~~~~~~~~---di~--t~sK~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~  303 (434)
T 3l44_A          232 VHEAGALVIYDEVITAFR---FMYGGAQDLLGVTP---DLT--ALGKVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTM  303 (434)
T ss_dssp             HHTTTCEEEEECTTTTTT---SSSSCHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTT
T ss_pred             HHHcCCEEEEecccccee---ccccHHHHHcCCCC---Cee--ehhhhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCC
Confidence            999999999999996423   333 3357788876   555  89999963  348899999998877542211 12234


Q ss_pred             CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHH
Q psy15447        319 SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKL  392 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~  392 (457)
                      +.+|+++++++++++.+++ +++.++++++.+++++.|+++....++....++.+.++++.+......      ......
T Consensus       304 ~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  382 (434)
T 3l44_A          304 AGNPASMASGIACLEVLQQ-EGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEM  382 (434)
T ss_dssp             TTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHH
T ss_pred             CcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHH
Confidence            5699999999999998865 468899999999999988763211222111234577888877432100      011224


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ..++.+.|+++||++++..         .+.+|+  +..+|++|+++++++|+++++++..
T Consensus       383 ~~~~~~~l~~~Gv~v~~~~---------~~~~rl--~~~~t~e~i~~~l~~l~~~l~~~~~  432 (434)
T 3l44_A          383 FGKFFKLMLQEGVNLAPSK---------YEAWFL--TTEHTKEDIEYTIEAVGRAFAALAD  432 (434)
T ss_dssp             HHHHHHHHHHTTEECCSST---------TCCEEC--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCeEEeecC---------CCcEEE--ecccCHHHHHHHHHHHHHHHHHHHh
Confidence            5678999999999988754         256777  4678999999999999999987643

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=100.00  E-value=7e-39  Score=321.57  Aligned_cols=381  Identities=17%  Similarity=0.191  Sum_probs=278.8

Q ss_pred             hhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcC
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNG  111 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~  111 (457)
                      ++++.+..++..+.++.++..... ...|+++++++|+++|+ ||++||||+++   +++|+ .||++.+++.+++++ +
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~-~   88 (434)
T 2epj_A           12 SRMLFERTKELFPGGVNSPVRAAV-KPYPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGH-KHPRVLEAVEEALAR-G   88 (434)
T ss_dssp             HHHHHHHHTTTSGGGSSSGGGGGC-SSSCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHT-C
T ss_pred             hHHHHHHHHhhcCCCcCccccccc-CCCCeeEEeeecCEEEECCCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHh-C
Confidence            456666676666655543322210 12488999999999995 99999999886   46677 589999999999987 3


Q ss_pred             CCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh----
Q psy15447        112 VGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA----  183 (457)
Q Consensus       112 ~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~----  183 (457)
                      ..+      .+..+...+++++|++++ +.+.+++++||++|+..++++   +.+++++|+.+..+|+.....+..    
T Consensus        89 ~~~------~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~  162 (434)
T 2epj_A           89 WLY------GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSA  162 (434)
T ss_dssp             SCC------SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC--
T ss_pred             CCC------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCC
Confidence            221      125778899999999999 788899999999999999987   677777777787788754322211    


Q ss_pred             ---------cCC------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHH
Q psy15447        184 ---------SRC------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRS  244 (457)
Q Consensus       184 ---------~g~------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~  244 (457)
                               .|.      .+..++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++|+
T Consensus       163 ~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~  234 (434)
T 2epj_A          163 AAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYG--------DRIAGVIVEPVIANAGVIPPRREFLAALQRLSR  234 (434)
T ss_dssp             ----CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHG--------GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHH
T ss_pred             ccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCC--------CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHH
Confidence                     132      467788899999999997532        35789999999999999888    999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCCc
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASLP  321 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~~  321 (457)
                      +||++||+||+|+..+.|.  .+..+++++.|   |++  |+||++|+  ++|++++++++++.+......+. .+.+.+
T Consensus       235 ~~g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~  307 (434)
T 2epj_A          235 ESGALLILDEVVTGFRLGL--EGAQGYFNIEG---DII--VLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAH  307 (434)
T ss_dssp             HHTCEEEEEETTTTTTSST--THHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTC
T ss_pred             HcCCEEEEEcchhceeCCc--chhhHHhCCCC---Cee--eecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcC
Confidence            9999999999998223332  23446677766   665  89999975  67999999998877654221111 233569


Q ss_pred             HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHHH
Q psy15447        322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQT  395 (457)
Q Consensus       322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~  395 (457)
                      |++++++.++++.+++ +++.++++++++++++.|+++....++....++.+.++++.+......      ..+.....+
T Consensus       308 ~~~~aa~~a~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  386 (434)
T 2epj_A          308 PITMAAGLATLKALEE-EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVK  386 (434)
T ss_dssp             HHHHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHH
Confidence            9999999999998876 458899999999999999873100133211234578888888641000      000124567


Q ss_pred             HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.+.|+++||++.+...         .+  +.++..+|++|+++++++|+++++++.
T Consensus       387 ~~~~l~~~Gv~v~~~~~---------~~--~~~~~~~t~e~i~~~l~~l~~~l~~~~  432 (434)
T 2epj_A          387 LHEEMLRRGVFIAPSNL---------EA--VFTGLPHQGEALEIAVEGLRSSLKTVL  432 (434)
T ss_dssp             HHHHHHHTTEECCSSTT---------SC--EECCTTCSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEeccCC---------Cc--EEEeccCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999887542         23  445678999999999999999988764

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=100.00  E-value=3.6e-43  Score=351.64  Aligned_cols=379  Identities=14%  Similarity=0.130  Sum_probs=281.0

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhc
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~  110 (457)
                      +++++.+..++..|.++..+.....  ..|+++++++|+++| .|||+||||+++.+   +|+ +||+|.+|+.+|+.+ 
T Consensus        56 ~s~~l~~~~~~~~~~g~~~~~~~~~--~~p~~~~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh-~~p~V~~Av~~q~~~-  131 (465)
T 2yky_A           56 VSAGHHERARRSMPGGNTRSILFHR--PFPLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGH-SHPVIRAAVERALAV-  131 (465)
Confidence            3555666666666655544332221  248899999999999 69999999998765   454 489999999999987 


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHH---h
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLI---A  183 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~---~  183 (457)
                      +...      ...++...+|+++|++++ +.+.+++++||++|++.|++..   .++.++|..+..+|+.+...+.   .
T Consensus       132 ~~~~------~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~  205 (465)
T 2yky_A          132 GLNL------STQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAP  205 (465)
Confidence            3221      125778899999999998 6788999999999999999875   4556677778889988765551   1


Q ss_pred             cCC--eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc
Q psy15447        184 SRC--KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS  257 (457)
Q Consensus       184 ~g~--~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~  257 (457)
                      .|.  .+..++++|+++|++++++..        +++++|++||+++++|.+.|    +++|+++|++||++||+||+|+
T Consensus       206 ~g~~~~~~~~~~~d~~~l~~~l~~~~--------~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~  277 (465)
T 2yky_A          206 TNAPYHVVLGVYNDVEGTADLLKRHG--------HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT  277 (465)
Confidence            233  456778899999999997532        46789999999999998877    9999999999999999999999


Q ss_pred             cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhh--CC-cceecCCCcHHHHHHHHHHH
Q psy15447        258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLS--GS-GYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~aaa~a~l  332 (457)
                       +++|.  .+..+++|+.|   |++  ||||++|+  +.|++++++++++.+...  .. ....+.+.+|+++++++++|
T Consensus       278 -~r~g~--~~a~~~~gv~p---Di~--t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL  349 (465)
T 2yky_A          278 -SRLSG--GGAQEMLGISA---DLT--TLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAAL  349 (465)
Confidence             66553  33557778766   665  89999975  348899999999988651  11 12233346999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHHHHHHHHHHHcCee
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLLQTICDMCIQAGFA  406 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~~~~~~~l~~~Gi~  406 (457)
                      +.+++. ++.++++++++++++.|+++....++....++.+.++++.+.+...     . ..+.....++++.|+++||+
T Consensus       350 ~~l~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~  428 (465)
T 2yky_A          350 TQIYTR-QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIY  428 (465)
Confidence            988654 5889999999999999987421122222224567888887754110     0 01112356799999999999


Q ss_pred             EeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        407 ITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       407 v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +.+..+         +.    ++..+|++||++++++|+++++++..
T Consensus       429 v~p~~~---------~~----~s~~~t~edid~~l~~l~~~l~~~~~  462 (465)
T 2yky_A          429 LAPRGM---------YA----LSLEIADAGRDAFAEALADFIGEQRA  462 (465)
Confidence            987653         11    66789999999999999999887654

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=6.4e-39  Score=320.35  Aligned_cols=347  Identities=15%  Similarity=0.140  Sum_probs=266.5

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+++|+ ||++||||+++   +++|+ ++|++.+++.++++++...+   +.  +..+...+++++|++++
T Consensus        39 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~ai~~~~~~~~~~~---~~--~~~~~~~~l~~~la~~~  112 (420)
T 2pb2_A           39 ADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGH-CHPALVEALKSQGETLWHTS---NV--FTNEPALRLGRKLIDAT  112 (420)
T ss_dssp             CCSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCCCCC---TT--SCCHHHHHHHHHHHHHS
T ss_pred             CCceEEeeecCEEEECCCCEEEEccccccccccCC-CCHHHHHHHHHHHHhccccc---Cc--cCCHHHHHHHHHHHhhC
Confidence            478899999999995 99999999886   67787 58999999999998865422   11  25688999999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhcC-------CC-CEEE-EeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYVK-------RN-DAVF-VDENINFAIQTGLIASRCK------------VQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~~-------~g-d~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~  197 (457)
                      |.+.+++++||++|+..+++++..       +| +.|+ .+..+|+.+...+...|.+            +..++++|++
T Consensus       113 g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~  192 (420)
T 2pb2_A          113 FAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLH  192 (420)
T ss_dssp             SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHH
T ss_pred             CCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHH
Confidence            999999999999999999998764       45 3454 5556777776666666543            6778888999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-C---ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-C---PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~---~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      +|++.+++           ++++|+++|+++++|.+ .   ++++|+++|++||++||+||+|+ | +|++|..+ .+.+
T Consensus       193 ~le~~i~~-----------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~-g-~~~~g~~~~~~~~  259 (420)
T 2pb2_A          193 AVKAVMDD-----------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQC-G-MGRTGDLFAYMHY  259 (420)
T ss_dssp             HHHHHCCT-----------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHHH
T ss_pred             HHHHHhcc-----------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCc-C-cccCCcHHHHHhc
Confidence            99988752           46899999999887763 3   38999999999999999999995 3 45555544 3567


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.|   |++  ||||++|+  +.|++++++++++.+.......+|  +.++++++++.++|+.+++ +++.++++++++
T Consensus       260 ~~~~---dii--t~sK~l~~G~~iG~~~~~~~l~~~l~~~~~~~t~--~~~~~~~aa~~a~L~~~~~-~~~~~~~~~~~~  331 (420)
T 2pb2_A          260 GVTP---DIL--TSAKALGGGFPVSAMLTTQEIASAFHVGSHGSTY--GGNPLACAVAGAAFDIINT-PEVLQGIHTKRQ  331 (420)
T ss_dssp             TCCC---SEE--EECGGGGTTSCCEEEEECHHHHTTCC----CCEE--CCCHHHHHHHHHHHHHHSS-HHHHHHHHHHHH
T ss_pred             CCCC---CeE--EecccccCCCceEEEEEhHHHHHhhcCCCcCccc--CcCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence            7765   676  79999973  358888888887766543233444  4599999999999998865 568899999999


Q ss_pred             HHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        351 TMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       351 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      ++.+.|+++. ..+.+... ++.+.++++.+......     ...++.+.|+++||++.+..         ++.+|++|+
T Consensus       332 ~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~-----~~~~l~~~l~~~Gi~v~~~~---------~~~iRl~~~  396 (420)
T 2pb2_A          332 QFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKYKG-----RARDFLYAGAEAGVMVLNAG---------ADVMRFAPS  396 (420)
T ss_dssp             HHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGGTT-----CHHHHHHHHHHTTEECEESS---------TTEEEECCC
T ss_pred             HHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCchH-----HHHHHHHHHHHCCCEEEeCC---------CCEEEEECC
Confidence            9999998731 11233222 34578888877642100     24578999999999988653         478999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        430 ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+|++|+++++++|+++++++
T Consensus       397 ~~~t~eei~~~~~~l~~~l~~~  418 (420)
T 2pb2_A          397 LVVEEADIHEGMQRFAQAVGKV  418 (420)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998765

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=100.00  E-value=1.2e-38  Score=319.48  Aligned_cols=381  Identities=15%  Similarity=0.198  Sum_probs=276.2

Q ss_pred             ChhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~  109 (457)
                      +++++.+..++..|.+.+++..... ....|+++++++|.++|+ ||++||||+++.   .+|+ +||++.+|+.+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~   84 (429)
T 4e77_A            6 KSENLYAQAQQLIPGGVNSPVRAFTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGH-NHPAIRQAVIEAVER   84 (429)
T ss_dssp             HHHHHHHHHHHHSGGGCSSGGGGTTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCC-CCHHHHHHHHHHHHh
Confidence            3567777777777777665433322 223688999999999995 999999998864   3454 489999999999987


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhc-
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIAS-  184 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~-  184 (457)
                      ... .      ....+...+|+++|++++ +.+++++++||++|++.+++.   +.+++++|+.+..+|+.+...+... 
T Consensus        85 ~~~-~------~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~  157 (429)
T 4e77_A           85 GLS-F------GAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAG  157 (429)
T ss_dssp             CSC-C------SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC----------
T ss_pred             Ccc-c------CCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcC
Confidence            321 1      125688899999999988 467889999999999999984   3466677777888888766322111 


Q ss_pred             ------------------CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        185 ------------------RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       185 ------------------g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                        ...+..++++|+++|++++++..        +++++|++||+++++|.+.|    +++|+++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l  229 (429)
T 4e77_A          158 SGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYP--------QEVACIIVEPVAGNMNCIPPLPEFLPGLRAL  229 (429)
T ss_dssp             --------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHST--------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHH
T ss_pred             CcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcC--------CCEEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence                              12456778889999999998642        46789999999999999988    9999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSAS  319 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~  319 (457)
                      |++||++||+||+|+..+.|.  .+..+++++.|   |++  |+||++|+  +.|++++++++++.+......+. .+.+
T Consensus       230 ~~~~~~lli~DEv~~g~r~g~--~~~~~~~~~~p---di~--t~sK~~~~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~  302 (429)
T 4e77_A          230 CDEFGALLIIDEVMTGFRVAL--AGAQDYYHVIP---DLT--CLGKIIGGGMPVGAFGGRREVMNALAPTGPVYQAGTLS  302 (429)
T ss_dssp             HHHHTCEEEEEETTTBTTTBT--TCHHHHTTCCC---SEE--EEEGGGGTTSCCEEEEECHHHHTTBTTTSSBCC--CCC
T ss_pred             HHHcCCEEEEeccccCcccCc--chHHHhcCCCC---Cee--eecccccCCCCeEEEEECHHHHHHhccCCCccccCCCC
Confidence            999999999999997323332  33457788876   665  89999964  56899999999887764322122 2335


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-h------HHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-E------VASKKL  392 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~------~~~~~~  392 (457)
                      .+|++++++.++++.+++ +++.++++++.+++++.|+++....++....++.+.++++.+..... .      ..+...
T Consensus       303 ~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (429)
T 4e77_A          303 GNPIAMAAGFACLTEISQ-VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVER  381 (429)
T ss_dssp             CCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHH
Confidence            799999999999998854 46889999999999998876321123222223457888888765410 0      001124


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..++++.|+++||++.+...         +.+|  ++..+|++|+++++++|++++++
T Consensus       382 ~~~~~~~l~~~Gi~v~~~~~---------~~~~--~~~~~t~e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          382 FKRFFHLMLEEGVYLAPSAF---------EAGF--MSLAHSNEDIQKTVNAARRCFAK  428 (429)
T ss_dssp             HHHHHHHHHHTTEECCSSTT---------SCEE--CCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCeEEeecCC---------CCEE--EeccCCHHHHHHHHHHHHHHHHh
Confidence            56899999999999887542         3444  56789999999999999998753

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=100.00  E-value=9.2e-39  Score=320.20  Aligned_cols=380  Identities=15%  Similarity=0.139  Sum_probs=280.5

Q ss_pred             hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhc
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      ++++.+...+..|.+..++..... ....|+++++++|.++|+ ||++||||+++.   ++|+ +||++.+|+.+++.+.
T Consensus         7 s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~   85 (429)
T 3k28_A            7 SIAAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGH-ANDRVVEALKAVAERG   85 (429)
T ss_dssp             HHHHHHHHTTTSGGGSSSGGGGCGGGTCCCCCEEEEEBTEEEETTCCEEEESCGGGTTCTTCB-SCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCChhhcccCC-CCHHHHHHHHHHHhhC
Confidence            567788888888888765544332 234688999999999995 999999999864   4555 4899999999999884


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcC-
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQTGLIASR-  185 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g-  185 (457)
                      ..       ++...+...+|+++|++++ +.+++++++||++|+..+++++.   ++..+|+.+..+|+.+...+...+ 
T Consensus        86 ~~-------~~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~  158 (429)
T 3k28_A           86 TS-------FGAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGS  158 (429)
T ss_dssp             SC-------CSSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred             cC-------cCCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCC
Confidence            32       1235688899999999998 57788999999999999998765   344455667777866544332222 


Q ss_pred             ------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447        186 ------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR  243 (457)
Q Consensus       186 ------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~  243 (457)
                                        ..+..++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~  230 (429)
T 3k28_A          159 GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG--------DDIACVIVEPVAGNMGVVPPQPGFLEGLREVT  230 (429)
T ss_dssp             TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred             cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC--------CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHH
Confidence                              1456778889999999997643        46789999999999999988    99999999


Q ss_pred             HHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCC
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSAS  319 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~  319 (457)
                      ++||++||+||+|+..   +.|.. ..+++++.|   |++  |+||++|+  +.|++++++++++.+...... ...+.+
T Consensus       231 ~~~~~~li~DEv~~g~---~~g~~~~~~~~~~~~---di~--t~sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~  302 (429)
T 3k28_A          231 EQNGALLIFDEVMTGF---RVAYNCGQGYYGVTP---DLT--CLGKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLS  302 (429)
T ss_dssp             HHHTCEEEEECTTTTT---TSSTTHHHHHHTCCC---SEE--EECGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTT
T ss_pred             HHcCCEEEEecccccc---ccCcchHHHHhCCCC---cee--hhhhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCC
Confidence            9999999999999532   33433 456778766   565  79999964  468999999998877542211 122345


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLL  393 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~  393 (457)
                      .+++++++++++++.++  +++.++++++.+++++.|+++....+.....++.+.++++.+..+...      ..+....
T Consensus       303 ~~~~a~aaa~aal~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (429)
T 3k28_A          303 GNPLAMAAGYETLVQLT--PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFF  380 (429)
T ss_dssp             TCHHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHH
T ss_pred             CChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHH
Confidence            69999999999998765  568899999999999998773111121111134577777776532100      0112245


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++++.|+++||++++..         .+.+|+  +..+|++|+++++++|+++++++.
T Consensus       381 ~~~~~~l~~~Gv~v~~~~---------~~~~r~--~~~~t~e~i~~~l~~l~~~l~~~~  428 (429)
T 3k28_A          381 AAYYREMVEQGVFLPPSQ---------FEGLFL--STVHSDADIEATIAAAEIAMSKLK  428 (429)
T ss_dssp             HHHHHHHHHTTEECCSST---------TSCBCC--CTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHCCeEEecCC---------CCCEEE--ECCCCHHHHHHHHHHHHHHHHHHh
Confidence            678999999999988653         356777  467899999999999999987653

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=100.00  E-value=1.5e-40  Score=354.05  Aligned_cols=374  Identities=11%  Similarity=0.022  Sum_probs=264.3

Q ss_pred             CCCCcccccc--ccCCceeeecCCCc--EEEE-CCe----eeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCC
Q psy15447         50 PIVSKAEKFK--DVSSKYVVDQKSGY--IVNI-NGI----PCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGP  117 (457)
Q Consensus        50 ~~~~~~~~~~--~~~~~~~i~~~~g~--~~~~-~G~----~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~  117 (457)
                      .+|+|.++..  ....|++|++++|.  |||+ ||+    +|||++|+   +.+|++.||+|.+|+.+|++++++..   
T Consensus       341 ~~whp~t~~~~~~~~~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~---  417 (831)
T 4a0g_A          341 VFWWPFTQHKLVHQETVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVM---  417 (831)
T ss_dssp             HBCCTTCCGGGCCGGGCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCC---
T ss_pred             hccCCccCcccccCCCCeEEEEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhccccc---
Confidence            4444444432  22357889999885  7885 898    99999874   44555338999999999999987542   


Q ss_pred             CCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhc------------------CCCCEEEEeCcccHH
Q psy15447        118 RGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYV------------------KRNDAVFVDENINFA  176 (457)
Q Consensus       118 ~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~------------------~~gd~v~~~~~~h~~  176 (457)
                       +...++++..+|+++|+++++   .++++|++||++||+.||+...                  ++.++|..+..||+.
T Consensus       418 -~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~  496 (831)
T 4a0g_A          418 -FPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGD  496 (831)
T ss_dssp             -CTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCS
T ss_pred             -ccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccC
Confidence             112368999999999999987   5689999999999999998752                  234578889999999


Q ss_pred             HHHHHHhcCCeE------------------------------EEec------------CCCH------------------
Q psy15447        177 IQTGLIASRCKV------------------------------QYFK------------HNNM------------------  196 (457)
Q Consensus       177 ~~~~~~~~g~~~------------------------------~~~~------------~~d~------------------  196 (457)
                      +..++.+++...                              ..+|            +++.                  
T Consensus       497 T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  576 (831)
T 4a0g_A          497 TLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYS  576 (831)
T ss_dssp             SHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHH
T ss_pred             ceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHH
Confidence            999998876310                              0111            1232                  


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCcccc
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTE  270 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~  270 (457)
                      ++|++.|++..   ....++++++|++||+ ++.+|.+.|    +++|+++|++||++||+||+++ +|++|+  .+.++
T Consensus       577 ~~le~~l~~~~---~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~--~fa~e  651 (831)
T 4a0g_A          577 AYLSKHLQEHS---GVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV--ETTTE  651 (831)
T ss_dssp             HHHHHHC------------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB--SSTHH
T ss_pred             HHHHHHHHhhh---hhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC--chhhH
Confidence            34555554210   0011267899999997 888888765    8999999999999999999875 655554  23468


Q ss_pred             ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC----CcceecCCCcHHHHHHHHHHHHHHhhCcHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG----SGYCFSASLPPFLAVAANKALHLLKANPSLLT  343 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~  343 (457)
                      ++|+.|   ||+  |++|++|+   +.|++++++++++.+....    ..+.++.+.+|++|++++++|+++++++ +.+
T Consensus       652 ~~gv~P---Dii--tlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~-l~~  725 (831)
T 4a0g_A          652 LLGCKP---DIA--CFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE-TNH  725 (831)
T ss_dssp             HHSSCC---SEE--EECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT-TCT
T ss_pred             hcCCCC---cEE--EEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH-HHH
Confidence            899988   676  89999964   3388999999998875432    1133455569999999999999987543 445


Q ss_pred             HHHHHHHH--------HHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCc
Q psy15447        344 KLREKCNT--------MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLD  414 (457)
Q Consensus       344 ~l~~~~~~--------l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~  414 (457)
                      +++++.++        +.+.+++   .+.+..+ ...+.++.+.+..+... ......+.++.+.|+++||++++.    
T Consensus       726 ~~~~~~~~l~~~l~~~l~~~l~~---~~~v~~v-rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~----  797 (831)
T 4a0g_A          726 NITSQGKTLRELWDEELVQQISS---HSAVQRV-VVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL----  797 (831)
T ss_dssp             TBCTTSSBBCCCSCHHHHHHHHH---STTEEEE-EEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB----
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhh---CCCceeE-eecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec----
Confidence            55444333        3334444   3444333 35688888887643211 111124667999999999998764    


Q ss_pred             cccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        415 QEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       415 ~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                            .+.+||++++.+|++||++++++|+++++++.
T Consensus       798 ------g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~  829 (831)
T 4a0g_A          798 ------GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN  829 (831)
T ss_dssp             ------TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred             ------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence                  37999999999999999999999999987654

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=100.00  E-value=6.9e-38  Score=315.70  Aligned_cols=356  Identities=14%  Similarity=0.136  Sum_probs=265.2

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+++|+ +|++|+||+++   +++|+. +|++.+|+.+++++++ .   ++...+..+...+++++|++++
T Consensus        32 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~-~---~~~~~~~~~~~~~l~~~la~~~  106 (449)
T 3a8u_X           32 DPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD-Y---SPGFQYGHPLSFQLAEKITDLT  106 (449)
T ss_dssp             SCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS-C---CCSSSCCCHHHHHHHHHHHTTS
T ss_pred             CCceEEeeecCEEEECCCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC-C---ccccccCCHHHHHHHHHHHHhC
Confidence            578899999999995 99999999765   456766 8999999999998754 1   1221346788899999999999


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhcC--------CCCEEEE-eCcccHHHHHHHHhcCC--------------eEEEecC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYVK--------RNDAVFV-DENINFAIQTGLIASRC--------------KVQYFKH  193 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~~--------~gd~v~~-~~~~h~~~~~~~~~~g~--------------~~~~~~~  193 (457)
                      +  .+.+++++||++|+..+++++..        ++|.|++ +..+|+.+..++...+.              ....++.
T Consensus       107 ~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~  186 (449)
T 3a8u_X          107 PGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTL  186 (449)
T ss_dssp             STTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCC
T ss_pred             CCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCc
Confidence            5  55788899999999999988753        5666655 66677776666666542              2222221


Q ss_pred             --------CC--------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q psy15447        194 --------NN--------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVD  253 (457)
Q Consensus       194 --------~d--------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~D  253 (457)
                              .|        +++|++.+++..       ++++++|+++|+++++|.+.|    +++|+++|++||++||+|
T Consensus       187 ~~~~~~~~~d~~~~~~~~~~~le~~l~~~~-------~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~D  259 (449)
T 3a8u_X          187 LASNAYSRGMPKEGGIALADELLKLIELHD-------ASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFD  259 (449)
T ss_dssp             CGGGTTCSSSCSSSHHHHHHHHHHHHHHHC-------GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred             cccCccccCChHHHHHHHHHHHHHHHHhcC-------CCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEe
Confidence                    15        888999887532       135689999999988998888    999999999999999999


Q ss_pred             cCc-ccccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCC-------cceecCCCcH
Q psy15447        254 ESV-SFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGS-------GYCFSASLPP  322 (457)
Q Consensus       254 Ea~-~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~-------~~~~~~~~~~  322 (457)
                      |+| ++|+.|.  .+..+++++.|   |++  |+||++++   +.|++++++++++.+.....       .+.++.+.++
T Consensus       260 ev~~~~g~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~  332 (449)
T 3a8u_X          260 EVITGFGRTGS--MFGADSFGVTP---DLM--CIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHP  332 (449)
T ss_dssp             CTTTTTTTTSS--SSHHHHHTCCC---SEE--EECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCH
T ss_pred             ccccCccccCc--chhhhhcCCCC---CEE--EEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccH
Confidence            999 4655443  22346677765   665  89999975   36888889999888865321       1223445699


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ  402 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~  402 (457)
                      ++++++.++++.+++. ++.++++++.+++++.|+++...+.+... ++.+.++++.+.......  .....++.+.|++
T Consensus       333 ~~~aa~~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~i~~~~~~~~~--~~~~~~~~~~l~~  408 (449)
T 3a8u_X          333 VACAAGLAALCLLQKE-NLVQSVAEVAPHFEKALHGIKGAKNVIDI-RNFGLAGAIQIAPRDGDA--IVRPFEAGMALWK  408 (449)
T ss_dssp             HHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCBTTBS--SHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeEEEEEEEEecCcccc--cccHHHHHHHHHH
Confidence            9999999999988764 58899999999999999873222333222 345788888886432100  0012358889999


Q ss_pred             cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        403 AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       403 ~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +||++++..          +++||+++..+|++|+++++++|+++++++
T Consensus       409 ~Gv~v~~~g----------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          409 AGFYVRFGG----------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             HTEECEEET----------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCcEEecCC----------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            999988642          689999999999999999999999998765

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=100.00  E-value=7.1e-39  Score=324.19  Aligned_cols=355  Identities=13%  Similarity=0.146  Sum_probs=253.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCCc---cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHNY---LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|..+++++|.++| .||++||||+++.+   +|+ +||+|.+|+.+++.+.+..+..........++.++++++|+++.
T Consensus        45 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~  123 (472)
T 1ohv_A           45 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGY-SHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVA  123 (472)
T ss_dssp             CCBCGGGCBBTEEEBTTSCEEEESSHHHHTCSSCB-TCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGC
T ss_pred             CCceEEEEEcCEEEeCCCCEEEECCCCHhhcccCC-CCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhC
Confidence            35678999999999 59999999988644   455 48999999999986532211110000124566777777777776


Q ss_pred             --CCCcEEEecccHHHHHHHHHhhc---------------------------C--CCCEEEEeCcccHHHHHHHHhcCCe
Q psy15447        139 --GLEETALYSFGFSTSASAIAAYV---------------------------K--RNDAVFVDENINFAIQTGLIASRCK  187 (457)
Q Consensus       139 --g~~~~i~~~sG~~a~~~ai~a~~---------------------------~--~gd~v~~~~~~h~~~~~~~~~~g~~  187 (457)
                        +.++++|++||++|++.|++++.                           +  +.++|..+..+|+.+..++.+++..
T Consensus       124 ~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~  203 (472)
T 1ohv_A          124 PKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK  203 (472)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSC
T ss_pred             CCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCc
Confidence              56789999999999999998763                           1  2356667778899888887776532


Q ss_pred             E-------------EEec-----------CC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC--
Q psy15447        188 V-------------QYFK-----------HN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP--  235 (457)
Q Consensus       188 ~-------------~~~~-----------~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--  235 (457)
                      .             ..++           ++      |+++|++.+++....     ..++++|++|++++++|.+.|  
T Consensus       204 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~vive~v~~~~G~~~~~~  278 (472)
T 1ohv_A          204 AIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKK-----KKTVAGIIVEPIQSEGGDNHASD  278 (472)
T ss_dssp             HHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEECSSBCTTTCBCCCH
T ss_pred             cccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCC-----CCCEEEEEEcCCcCCCCCCCCCH
Confidence            1             1221           12      577888888653210     026789999999999998877  


Q ss_pred             --hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCC
Q psy15447        236 --LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       236 --l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~  312 (457)
                        +++|+++|++||++||+||+|+.  +|++|.+ ..+++|+. ..+|++  ||||++ ..||+++ ++++. .+.... 
T Consensus       279 ~~l~~l~~l~~~~g~lli~DEv~~g--~g~~g~~~~~~~~gv~-~~~Di~--t~sK~~-l~GG~~~-~~~~~-~~~~~~-  349 (472)
T 1ohv_A          279 DFFRKLRDISRKHGCAFLVDEVQTG--GGSTGKFWAHEHWGLD-DPADVM--TFSKKM-MTGGFFH-KEEFR-PNAPYR-  349 (472)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTT--TTTTSSSSGGGGGCCS-SCCSEE--EECGGG-SSEEEEE-CGGGS-CSSSSS-
T ss_pred             HHHHHHHHHHHHhCCEEEEeCcccC--CCCCCCchhccccCCC-CCCCEE--EEcccc-ccCCccC-chhhc-cccccc-
Confidence              99999999999999999999972  4455543 45677764 123776  899994 2268877 65542 111111 


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCC-eEEeccCCCCeEEEEecCCcchHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQR-FLVQGHRDTPLKYLYLQKSDDEVASK  390 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~  390 (457)
                       ...+.+.+|+++++++++|+.+.+. ++.++++++++++++.|+++. ..++ +... .+.+.++++.+....      
T Consensus       350 -~~~T~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~~~------  420 (472)
T 1ohv_A          350 -IFNTWLGDPSKNLLLAEVINIIKRE-DLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPDES------  420 (472)
T ss_dssp             -SCCSSSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSSHH------
T ss_pred             -ccCccCccHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCChh------
Confidence             1122246999999999999988764 478999999999999998732 1222 3222 234778887665422      


Q ss_pred             HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        391 KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       391 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       ...+++++|+++||++.+..         .+++||+++..+|++||++++++|+++++++
T Consensus       421 -~~~~~~~~l~~~Gv~~~~~g---------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~  471 (472)
T 1ohv_A          421 -IRNKLISIARNKGVMLGGCG---------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF  471 (472)
T ss_dssp             -HHHHHHHHHHHTTEECEEET---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             -HHHHHHHHHHHCCeEEecCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence             45689999999999987642         4799999999999999999999999988754

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=100.00  E-value=3.1e-38  Score=315.85  Aligned_cols=377  Identities=18%  Similarity=0.206  Sum_probs=275.3

Q ss_pred             hhhHHHHHcccCCCCCCCccccccc-cCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFKD-VSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      ++++.+..++..|.+..++...... ...|+++++++|+++|+ ||++||||+++   +++|+ +||++.+|+.+++++ 
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~-   83 (424)
T 2e7u_A            6 SEAYFQEAKRHIPGGVSSPVRAFKAVGGTPPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGH-AHPKVLARVRETLER-   83 (424)
T ss_dssp             HHHHHHHHHHHSGGGSSSGGGGCTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHhcCCCcCCcceeccccCCCCeeEEeeecCEEEeCCCCEEEEccccccccccCC-CCHHHHHHHHHHHHh-
Confidence            4566677777777665543333221 23588899999999995 99999999986   46777 689999999999987 


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh---
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA---  183 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~---  183 (457)
                      +..+      .+..+...+++++|++++ +.+.+++++||++|+..++++   +.+++++|+.+..+|+.....+..   
T Consensus        84 ~~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~  157 (424)
T 2e7u_A           84 GLTF------GAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGS  157 (424)
T ss_dssp             CSCC------SSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCS
T ss_pred             CCCC------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCC
Confidence            3221      135778899999999999 677889999999999999986   777777777777777644332211   


Q ss_pred             ----------cC------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447        184 ----------SR------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR  243 (457)
Q Consensus       184 ----------~g------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~  243 (457)
                                .|      ..+..++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++ 
T Consensus       158 ~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-  228 (424)
T 2e7u_A          158 GALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRG--------EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-  228 (424)
T ss_dssp             SSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-
T ss_pred             cccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCC--------CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-
Confidence                      12      2467788899999999997532        35689999999988998887    9999999 


Q ss_pred             HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcce-ecCCC
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYC-FSASL  320 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~-~~~~~  320 (457)
                      ++||++||+||+|+..+.|.  .+..+++++.|   |++  |+||++|+  ++|++++++++++.+......+. .+.+.
T Consensus       229 ~~~g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~  301 (424)
T 2e7u_A          229 KAYGVLLIADEVMTGFRLAF--GGATELLGLKP---DLV--TLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQAGTLSG  301 (424)
T ss_dssp             GGGTCEEEEECTTTTTTSST--THHHHHHTCCC---SEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTCS
T ss_pred             HHcCCEEEEecCccccccch--hHHHHHhCCCc---chh--hhhhhhhCCcceEEEEEcHHHHhhhcccCCcccCCCCCC
Confidence            99999999999998323332  23446778766   665  89999975  66999999998887754221122 23356


Q ss_pred             cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc--ch----HHHHHHHH
Q psy15447        321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD--DE----VASKKLLQ  394 (457)
Q Consensus       321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~----~~~~~~~~  394 (457)
                      +|++++++.++++.+++.+++.++++++++++++.|+++....++....++.+.++++.+....  ..    ..+.....
T Consensus       302 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  381 (424)
T 2e7u_A          302 NPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFK  381 (424)
T ss_dssp             CHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHH
Confidence            9999999999999887645688999999999999998731101332111345778888876410  00    00012456


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ++++.|+++||++.+...         ..+  .++..+|++|+++++++|+++
T Consensus       382 ~~~~~l~~~Gv~v~~~~~---------~~~--~~~~~~t~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          382 RFFHGLLDRGIYWPPSNF---------EAA--FLSVAHREEDVEKTLEALRKA  423 (424)
T ss_dssp             HHHHHHHTTTEECCSSSS---------SCE--ECCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCeEEeccCC---------Cce--EeeccCCHHHHHHHHHHHHHh
Confidence            789999999999887542         234  456789999999999999875

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=100.00  E-value=6.2e-38  Score=314.02  Aligned_cols=380  Identities=16%  Similarity=0.163  Sum_probs=277.6

Q ss_pred             hhhHHHHHcccCCCCCCCcccccc-ccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         36 TINVDALINNWTPEPIVSKAEKFK-DVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      ++++.+...+..|.+...+..... ....|+++++++|.++|+ ||++||||+++   +.+|+ +||++.+|+.+++++.
T Consensus         6 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~   84 (427)
T 3fq8_A            6 SDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEKG   84 (427)
T ss_dssp             HHHHHHHHTTTSGGGSSSGGGGCTTTTSCCCCEEEEEBTEEEETTSCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhhcCCCcccccccccccCCCCceEEEeeeCEEEECCCCEEEECCCchhhhccCC-CCHHHHHHHHHHHHhC
Confidence            456777777777776654333221 123688999999999995 99999999887   34555 4899999999999874


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcC-
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASR-  185 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g-  185 (457)
                      .. +      ....+...+|+++|+++++ .+++++++||++|+..+++   .+.+++++|+.+..+|+.+.......+ 
T Consensus        85 ~~-~------~~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~  157 (427)
T 3fq8_A           85 TS-F------GAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGS  157 (427)
T ss_dssp             SC-C------SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred             CC-c------CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCC
Confidence            22 1      1157888999999999884 6788999999999999995   445666777778888865432211111 


Q ss_pred             ------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447        186 ------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR  243 (457)
Q Consensus       186 ------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~  243 (457)
                                        ..+..++++|++++++++++..        +++++|+++|+++++|.+.|    +++|+++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~  229 (427)
T 3fq8_A          158 GVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENP--------GEIAGVILEPIVGNSGFIVPDAGFLEGLREIT  229 (427)
T ss_dssp             HHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHST--------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHH
T ss_pred             cccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCC--------CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHH
Confidence                              2367788899999999997642        46789999999999999998    99999999


Q ss_pred             HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCc-ceecCCC
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSG-YCFSASL  320 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~-~~~~~~~  320 (457)
                      ++||++||+||+|+..+.|.  .+..+++++.|   |++  |+||++|+  +.|++++++++++.+...... +..+.+.
T Consensus       230 ~~~~~~li~DEv~~g~~~g~--~~~~~~~~~~~---di~--t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~  302 (427)
T 3fq8_A          230 LEHDALLVFDEVITGFRIAY--GGVQEKFGVTP---DLT--TLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSG  302 (427)
T ss_dssp             HHTTCEEEEECTTTBTTTBT--THHHHHTTCCC---SEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTT
T ss_pred             HHcCCEEEEeccccccccCc--chhhHhcCCCC---Chh--hhhhhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCc
Confidence            99999999999997222221  23456778766   554  89999964  468999999998877543211 1222345


Q ss_pred             cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch------HHHHHHHH
Q psy15447        321 PPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE------VASKKLLQ  394 (457)
Q Consensus       321 ~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~  394 (457)
                      +|++++++.++++.+++ +++.++++++.+++++.|+++....++....+..+.++++.+......      ..+.....
T Consensus       303 ~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  381 (427)
T 3fq8_A          303 NPLAMTAGIKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFS  381 (427)
T ss_dssp             CHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHH
T ss_pred             CHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHH
Confidence            99999999999998865 458899999999999988763211122212234577888877542100      01112356


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ++++.|+++||++.+...           .|+.++..+|++|+++++++|++++++
T Consensus       382 ~l~~~l~~~Gi~v~~~~~-----------~r~~~~~~~t~e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          382 RFHRGMLEQGIYLAPSQF-----------EAGFTSLAHTEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             HHHHHHHHTTEECCSSTT-----------SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCcEEecCCC-----------CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence            789999999999887542           266678889999999999999998865

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=9.9e-38  Score=308.93  Aligned_cols=339  Identities=17%  Similarity=0.150  Sum_probs=264.0

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|.++| .||++|+||+++.   .+|+ .+|++.+++.+++++++.++.     .+..+...++++++++++
T Consensus        18 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~   91 (392)
T 3ruy_A           18 LPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGH-RHPKIINALIDQANRVTLTSR-----AFHSDQLGPWYEKVAKLT   91 (392)
T ss_dssp             CSCEECEEEBTEEECTTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCT-----TSEETTHHHHHHHHHHHH
T ss_pred             CCceEEeeeeCEEEeCCCCEEEEcCCChhhhccCC-CCHHHHHHHHHHHHhcccccc-----ccCCHHHHHHHHHHHHhc
Confidence            57889999999999 5999999998752   2344 489999999999988654321     135678899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhcCC----------CCEEEEeCccc-HHHHHHHHhcCC------------eEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYVKR----------NDAVFVDENIN-FAIQTGLIASRC------------KVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~~~----------gd~v~~~~~~h-~~~~~~~~~~g~------------~~~~~~~~d  195 (457)
                      |.+.+++++||++|+..+++++..+          +|.|++..+.| +.......+.+.            .+..++++|
T Consensus        92 g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  171 (392)
T 3ruy_A           92 NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGD  171 (392)
T ss_dssp             TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTC
T ss_pred             CCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCccc
Confidence            9999999999999999999877643          66888766655 544444444332            467788899


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cc
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TE  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~  270 (457)
                      ++++++.++           +++++|++++++|++|.+.|    +++|+++|++||++||+||+|+.  +|..|..+ .+
T Consensus       172 ~~~l~~~l~-----------~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~--~~~~g~~~~~~  238 (392)
T 3ruy_A          172 LEALKAAIT-----------PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTG--LGRTGKVFACD  238 (392)
T ss_dssp             HHHHHHHCC-----------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTT--TTTTSSSSGGG
T ss_pred             HHHHHHHhc-----------cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC--CCccccchhhh
Confidence            999999885           25689999999999999998    99999999999999999999952  33334433 35


Q ss_pred             ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      .+++.+   |++  |+||++++   ++|++++++++++.+........+  +.+++.++++.++++.++. +++++++++
T Consensus       239 ~~~~~~---d~~--~~SK~l~gG~~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~-~~~~~~~~~  310 (392)
T 3ruy_A          239 WDNVTP---DMY--ILGKALGGGVFPISCAAANRDILGVFEPGSHGSTF--GGNPLACAVSIAALEVLEE-EKLTERSLQ  310 (392)
T ss_dssp             GGTCCC---SEE--EECGGGGTTTSCCEEEEECHHHHTTCCTTSSCCSS--TTCHHHHHHHHHHHHHHHH-TTHHHHHHH
T ss_pred             ccCCCC---CEE--EEchhhhCChhhhEEEEECHHHHhhhccCCcCCCC--CCCHHHHHHHHHHHHHHHh-hhHHHHHHH
Confidence            566654   665  78999964   469999999888776544433333  5699999999999998866 468899999


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +.+++.+.|+++. .+.+... ++.+.++++.++..         ..++.+.|.++||.+.+..         .+++|++
T Consensus       311 ~~~~l~~~L~~~~-~~~~~~~-~~~g~~~~~~~~~~---------~~~l~~~l~~~gi~v~~~~---------~~~iRi~  370 (392)
T 3ruy_A          311 LGEKLVGQLKEID-NPMITEV-RGKGLFIGIELNEP---------ARPYCEQLKAAGLLCKETH---------ENVIRIA  370 (392)
T ss_dssp             HHHHHHHHHTTCC-CTTEEEE-EEETTEEEEEESSC---------SHHHHHHHHTTTEECCCBT---------TTEEEEC
T ss_pred             HHHHHHHHHHHhc-CCCceEE-EeeeeEEEEEEcch---------HHHHHHHHHHCCcEEecCC---------CCEEEEE
Confidence            9999999998832 1234433 34577777777642         2468889999999988653         4799999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHH
Q psy15447        428 CNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ++..+|++|+++++++|++++
T Consensus       371 ~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          371 PPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999999875

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=1.7e-36  Score=303.42  Aligned_cols=361  Identities=16%  Similarity=0.146  Sum_probs=266.6

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++.+++|+++|. +|++|+||+++.   ++|+ ++|++.+++.+++++++...    ..++..+...+|+++|++++
T Consensus        23 ~~~~~~~~~g~~~~d~~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~----~~~~~~~~~~~l~~~la~~~   97 (426)
T 1sff_A           23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTC----FQVLAYEPYLELCEIMNQKV   97 (426)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCC----TTTEECHHHHHHHHHHHHHS
T ss_pred             CCceEEecccCEEEeCCCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCcc----ccccCCHHHHHHHHHHHHhC
Confidence            377889999999994 999999998764   5676 58999999999998754321    12445778899999999999


Q ss_pred             -C-C-CcEEEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHHHHHhcCCe-------------EEEecC-----C
Q psy15447        139 -G-L-EETALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQTGLIASRCK-------------VQYFKH-----N  194 (457)
Q Consensus       139 -g-~-~~~i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-------------~~~~~~-----~  194 (457)
                       | . +.++++++|++|+..+++   ++++++++|+.+..+|+.....+...|.+             +..++.     +
T Consensus        98 ~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~  177 (426)
T 1sff_A           98 PGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG  177 (426)
T ss_dssp             SCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGT
T ss_pred             CcccccEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccc
Confidence             5 4 567888899999999988   67788866666677777776677766542             444443     2


Q ss_pred             -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                           |++++++.+++...      ++++++|+++|+++++|.+.+    +++|+++|++||++||+||+|+ + +++.|
T Consensus       178 ~~~~~d~~~l~~~l~~~~~------~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g  249 (426)
T 1sff_A          178 ISEDDAIASIHRIFKNDAA------PEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-G-AGRTG  249 (426)
T ss_dssp             BCHHHHHHHHHHHHHHTCC------GGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTS
T ss_pred             cchHHHHHHHHHHHHhccC------CCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-c-cCccc
Confidence                 67888888864210      135678999988777997777    9999999999999999999998 3 44444


Q ss_pred             Ccc-ccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHH
Q psy15447        266 HGV-TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSL  341 (457)
Q Consensus       266 ~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~  341 (457)
                      ... .+.+++.+   |++  ||||++|+ |   ||+++++++++.+....  ...+.+.+++.++++.++++.+++. ++
T Consensus       250 ~~~~~~~~~~~~---di~--s~sK~~~~-GlriG~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~aal~~~~~~-~~  320 (426)
T 1sff_A          250 TLFAMEQMGVAP---DLT--TFAKSIAG-GFPLAGVTGRAEVMDAVAPGG--LGGTYAGNPIACVAALEVLKVFEQE-NL  320 (426)
T ss_dssp             SSSGGGGTTSCC---SEE--EECGGGGT-SSCCEEEEEEHHHHTTSCTTS--BCCSSSSCHHHHHHHHHHHHHHHHT-TH
T ss_pred             chhhhhhcCCCC---CEE--EEcccccC-CCceEEEEEcHHHHhhhccCC--cCcCCCCCHHHHHHHHHHHHHHHhc-CH
Confidence            433 34555544   665  89999986 6   99999998887665322  2334456999999999999988764 57


Q ss_pred             HHHHHHHHHHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCC
Q psy15447        342 LTKLREKCNTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKK  419 (457)
Q Consensus       342 ~~~l~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~  419 (457)
                      .++++++.+++++.|+++.. ++.+... .+.+.++++.+...... ........++.+.|.++||.+.++..       
T Consensus       321 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~-------  392 (426)
T 1sff_A          321 LQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP-------  392 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-------
Confidence            88999999999998876321 2233322 23478888888531000 00011456789999999999987652       


Q ss_pred             CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        420 QKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       420 ~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ..+++|++++..+|++|+++++++|++++++++|
T Consensus       393 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~~  426 (426)
T 1sff_A          393 YYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ  426 (426)
T ss_dssp             TSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHhC
Confidence            1478999999899999999999999999987754

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=100.00  E-value=4.2e-37  Score=310.35  Aligned_cols=378  Identities=14%  Similarity=0.141  Sum_probs=263.6

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      +++++.+...+..|.+..++.....  ..|+++++++|.++|+ ||++||||+++   +++|+ .+|++.+|+.+++++ 
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~-   88 (453)
T 2cy8_A           13 GSVFWAQRARSVMPDGVTADTRAFD--PHGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSH-   88 (453)
T ss_dssp             HHHHHHHHHHHHSCCC------CCS--SCCCCEEEEEBTEEEETTCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTT-
T ss_pred             hhHHHHHHHHhhcCCCCCccccccC--CCCceEEEeecCEEEECCCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHh-
Confidence            3556777777777665544322211  2478899999999994 99999999887   56777 689999999999976 


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhc-CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHh---
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFM-GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIA---  183 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~---  183 (457)
                      +..+      .+..+...++++++++.+ +.+.+++++||++|+..++++   +++++++|+.+..+|+........   
T Consensus        89 ~~~~------~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~  162 (453)
T 2cy8_A           89 GVQY------AASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNS  162 (453)
T ss_dssp             TCSS------CSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC---------------
T ss_pred             CCCC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCC
Confidence            3221      135778888999998887 577889999999999999998   778877777777777654432211   


Q ss_pred             -------cCC------eEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHc
Q psy15447        184 -------SRC------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKY  246 (457)
Q Consensus       184 -------~g~------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~  246 (457)
                             .|.      .+..++++|++++++.+++..        +++++|++||+++++|.+.|    +++|+++|++|
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~--------~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~  234 (453)
T 2cy8_A          163 HFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHG--------SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQY  234 (453)
T ss_dssp             -------------CGGGEEEECTTCHHHHHHHHHHHG--------GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHT
T ss_pred             ccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcC--------CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence                   132      356778889999999997532        35689999999988998887    99999999999


Q ss_pred             CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhh--CC-cceecCCCc
Q psy15447        247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLS--GS-GYCFSASLP  321 (457)
Q Consensus       247 g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~--~~-~~~~~~~~~  321 (457)
                      |++||+||+|+..+.|.  .+..+++++.|   |++  |+||++|+  ++|++++++++++.+...  .. ....+.+.+
T Consensus       235 g~~lI~DEv~~g~~~g~--~~~~~~~~~~~---di~--s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n  307 (453)
T 2cy8_A          235 GALFILDEVISGFRVGN--HGMQALLDVQP---DLT--CLAKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGN  307 (453)
T ss_dssp             TCEEEEECTTTTTTTCT--THHHHHHTCCC---SEE--EEEGGGGTTSSCEEEEECHHHHTTSSSCC---------CCCC
T ss_pred             CCEEEEecCccccccCc--hhhhHHhCCCC---cEE--EEChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCCCC
Confidence            99999999997222221  23345677766   665  89999964  669999999888776541  10 111233569


Q ss_pred             HHHHHHHHHHHHH-HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC-----Ccch-------HH
Q psy15447        322 PFLAVAANKALHL-LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK-----SDDE-------VA  388 (457)
Q Consensus       322 ~~~~aaa~a~l~~-~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~-------~~  388 (457)
                      |++++++.++++. + . +++.++++++.+++++.|+++....++....++.+.++++.+..     ....       ..
T Consensus       308 ~~~~aa~~aal~~~~-~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  385 (453)
T 2cy8_A          308 PITAAAAIAAIDTIL-E-DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARP  385 (453)
T ss_dssp             HHHHHHHHHHHHHHH-H-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCC
T ss_pred             HHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccc
Confidence            9999999999997 6 3 34788999999999999977311013222124567889998874     2000       00


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.....++++.|+++||++.+.           +.+|  ++..+|++|+++++++|+++++++.
T Consensus       386 ~~~~~~~l~~~l~~~Gv~v~~~-----------~~~~--l~~~~t~~~i~~~l~~l~~~l~~~~  436 (453)
T 2cy8_A          386 DVKMIAAMRMALILEGVDIGGR-----------GSVF--LSAQHEREHVEHLVTTFDRVLDRLA  436 (453)
T ss_dssp             CHHHHHHHHHHHHHTTEECBTT-----------TEEE--CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHCCeEEeCC-----------CCEE--eeccCCHHHHHHHHHHHHHHHHHHH
Confidence            0113567899999999998431           2344  5688999999999999999988764

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=1.5e-36  Score=304.55  Aligned_cols=362  Identities=15%  Similarity=0.126  Sum_probs=261.8

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++.+++|+++| .+|++|+||+++.   ++|+ ++|++.+|+.+++++++..+     ..+..+...+++++|++++
T Consensus        25 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~l~~~la~~~   98 (433)
T 1zod_A           25 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLF-----SEMLSRPVVDLATRLANIT   98 (433)
T ss_dssp             CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCC-----TTCCCHHHHHHHHHHHHHS
T ss_pred             CCceEEEeecCEEEeCCCCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCcccc-----cccCCHHHHHHHHHHHHhC
Confidence            37788999999999 5999999997653   4565 58999999999998864321     1235678899999999999


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc--CCCC-EEEEeCcccHHHHHHHHhc-------------CCeEEEec------CC
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV--KRND-AVFVDENINFAIQTGLIAS-------------RCKVQYFK------HN  194 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~--~~gd-~v~~~~~~h~~~~~~~~~~-------------g~~~~~~~------~~  194 (457)
                      +  .+.+++++||++|+..+++++.  ..++ +|+.+..+|+.....+...             +.....++      ++
T Consensus        99 ~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  178 (433)
T 1zod_A           99 PPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFE  178 (433)
T ss_dssp             CTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCE
T ss_pred             CCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccC
Confidence            7  4678888899999999998643  2244 4455556787766665543             22222222      23


Q ss_pred             ---------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-ccc
Q psy15447        195 ---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGT  260 (457)
Q Consensus       195 ---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~  260 (457)
                               |++++++.+++..       ++++++|++||+++++|.+.|    +++|+++|++||++||+||+|+ +|+
T Consensus       179 ~~~~~~~~~d~~~le~~l~~~~-------~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~  251 (433)
T 1zod_A          179 RNGAYDYLAELDYAFDLIDRQS-------SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR  251 (433)
T ss_dssp             ETTEECHHHHHHHHHHHHHHHC-------CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred             CchhhhHHHHHHHHHHHHHhcC-------CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCc
Confidence                     3888888887532       135689999999989998766    9999999999999999999997 544


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN  338 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~  338 (457)
                      .|.  .+..+++++.|   |++  |+||++|+  +.|++++++++++.+.........+.+.++++++++.++++.+++.
T Consensus       252 ~g~--~~~~~~~~~~~---di~--s~sK~~~~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~  324 (433)
T 1zod_A          252 TGT--MFACQRDGVTP---DIL--TLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD  324 (433)
T ss_dssp             TSS--SSTHHHHTCCC---SEE--EECHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred             Cch--HhHHhhcCCCC---CEE--EecccccCCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence            432  12346667665   565  89999974  2389999999998887532221134456999999999999988764


Q ss_pred             cHHHHHHHHHHHHHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQE  416 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~  416 (457)
                       ++.++++++++++++.|+++. ..+.+... ++.+.++++.+...... ........++.+.|+++||++.++..    
T Consensus       325 -~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----  398 (433)
T 1zod_A          325 -GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL----  398 (433)
T ss_dssp             -THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC----
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCC----
Confidence             478999999999999987732 12333332 34577888876531000 00001356789999999999987652    


Q ss_pred             cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        417 AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       417 ~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       +..++++||+++..+|++|+++++++|+++++++
T Consensus       399 -~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          399 -PGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             -TTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence             1124799999999999999999999999988764

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=4.6e-36  Score=300.61  Aligned_cols=349  Identities=12%  Similarity=0.065  Sum_probs=259.2

Q ss_pred             cee-eecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         64 KYV-VDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        64 ~~~-i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      |++ +.+++|+++|+ +|++|+|++++.   ++|+ .+|++.+|+.++++++...+. +   .+..+...++++++++++
T Consensus        25 ~~~~~~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~-~---~~~~~~~~~l~~~la~~~   99 (429)
T 1s0a_A           25 PVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMF-G---GITHAPAIELCRKLVAMT   99 (429)
T ss_dssp             CCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCC-S---SEECHHHHHHHHHHHHHS
T ss_pred             CceeEEeeeeeEEEeCCCCEEEEcCccHhhccCCC-CCHHHHHHHHHHHHhcccccc-c---ccCCHHHHHHHHHHHHhC
Confidence            444 88999999995 999999998864   4555 489999999999987543211 1   124567889999999999


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc---C----CCCEEEEeC-cccHHHHHHHHhcC---------------CeEEEec-
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV---K----RNDAVFVDE-NINFAIQTGLIASR---------------CKVQYFK-  192 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~---~----~gd~v~~~~-~~h~~~~~~~~~~g---------------~~~~~~~-  192 (457)
                      +  .++++++++|++|+..+++++.   +    +++.|++.. .+|+.....+.+.+               .....++ 
T Consensus       100 ~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (429)
T 1s0a_A          100 PQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ  179 (429)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCC
T ss_pred             CCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCc
Confidence            5  5678889999999999988653   3    477666655 56766555554432               3333333 


Q ss_pred             --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecC-CCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-c
Q psy15447        193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV-YMNSADICP----LKDILSLRSKYQARIFVDESVS-F  258 (457)
Q Consensus       193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v-~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~  258 (457)
                              ++|++++++.+++..        +++++|+++|+ +|++|.+.|    +++|+++|++||++||+||+|+ +
T Consensus       180 ~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~  251 (429)
T 1s0a_A          180 SRMDGEWDERDMVGFARLMAAHR--------HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGF  251 (429)
T ss_dssp             SBC-CCCCGGGGHHHHHHHHHHT--------TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             ccccccchHHHHHHHHHHHHhCC--------CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC
Confidence                    357899999887532        35689999999 889998777    9999999999999999999997 5


Q ss_pred             ccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-Cc--ceecCCCcHHHHHHHHHHH
Q psy15447        259 GTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-SG--YCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       259 g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~aaa~a~l  332 (457)
                      |..|.  .+..+++++.+   |++  |+||++++   +.|++++++++++.+.... ..  ...+.+.++++++++.+++
T Consensus       252 g~~g~--~~~~~~~~~~~---d~~--t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal  324 (429)
T 1s0a_A          252 GRTGK--LFACEHAEIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASL  324 (429)
T ss_dssp             TTTSS--SSGGGGGTCCC---SEE--EECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHH
T ss_pred             cccch--HHHhhhcCCCC---CEE--EecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHH
Confidence            44332  12345566655   665  79999974   3489999999988886431 11  1233456999999999999


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH  412 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~  412 (457)
                      +.+++. +..++++++++++.+.|+++...+++... ++.+.++++.+....       ...++.+.|+++||++++.  
T Consensus       325 ~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~l~~~l~~~Gi~v~~~--  393 (429)
T 1s0a_A          325 AILESG-DWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHPV-------NMAALQKFFVEQGVWIRPF--  393 (429)
T ss_dssp             HHHHTC-HHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSCB-------CHHHHHHHHHHTTEECCCB--
T ss_pred             HHHHhC-CHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEEEECCcc-------cHHHHHHHHHHCCCEEecc--
Confidence            988664 57899999999999999874323455432 334678888876533       3457889999999998763  


Q ss_pred             CccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        413 LDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       413 ~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                              .+++||+++..+|++|+++++++|+++++++
T Consensus       394 --------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~  424 (429)
T 1s0a_A          394 --------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             --------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred             --------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence                    2689999999999999999999999887654

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=7.3e-37  Score=303.25  Aligned_cols=344  Identities=17%  Similarity=0.147  Sum_probs=264.4

Q ss_pred             CCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         62 SSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        62 ~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      ..|+++.+++|+++|+ +|++|+||+++   +++|+ .+|++.+++.+++++++..+.   .  ...+...+++++++++
T Consensus        21 ~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~---~--~~~~~~~~l~~~la~~   94 (397)
T 2ord_A           21 RFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGH-SHPRLVEAIKDQAEKLIHCSN---L--FWNRPQMELAELLSKN   94 (397)
T ss_dssp             CCSCEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCT---T--SEEHHHHHHHHHHHHT
T ss_pred             CCCceEEeeecCEEEECCCCEEEECCccccccccCC-CCHHHHHHHHHHHHhcccCcc---c--cCCHHHHHHHHHHHHh
Confidence            3578899999999995 99999999887   77888 589999999999988654321   1  1467889999999999


Q ss_pred             cCCCcEEEecccHHHHHHHHHhhcC------C--CCEEEEeCcccHHHHHHHHhcCCe------------EEEecCCCHH
Q psy15447        138 MGLEETALYSFGFSTSASAIAAYVK------R--NDAVFVDENINFAIQTGLIASRCK------------VQYFKHNNMQ  197 (457)
Q Consensus       138 ~g~~~~i~~~sG~~a~~~ai~a~~~------~--gd~v~~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~  197 (457)
                      +|.+.++++++|++|+..+++++..      +  +++|+.+..+|+.+...++..|.+            +..++.+|++
T Consensus        95 ~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~  174 (397)
T 2ord_A           95 TFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVE  174 (397)
T ss_dssp             TTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHH
T ss_pred             cCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHH
Confidence            9998899999999999999988752      3  345556666777777677777765            7788889999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC-CC---ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-cccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD-IC---PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYF  272 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~-i~---~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~  272 (457)
                      ++++.+++           ++++|++++++||+|. +.   ++++|+++|++||++||+||+|+ | ++..|... ...+
T Consensus       175 ~l~~~l~~-----------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~~  241 (397)
T 2ord_A          175 DLRRKMSE-----------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-G-MGRTGKLFAYQKY  241 (397)
T ss_dssp             HHHHHCCT-----------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSHHHHH
T ss_pred             HHHHHhhc-----------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCccchhhhhh
Confidence            99988742           4689999999999999 44   48899999999999999999997 3 34444433 2445


Q ss_pred             CCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCN  350 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~  350 (457)
                      ++.+   |++  |+||++|+  +.|+++++++++ .++.....  .+.+.+++.++++.++++.+++ ++++++++++++
T Consensus       242 ~~~~---d~~--s~sK~~~~G~r~G~~~~~~~~~-~l~~~~~~--~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~  312 (397)
T 2ord_A          242 GVVP---DVL--TTAKGLGGGVPIGAVIVNERAN-VLEPGDHG--TTFGGNPLACRAGVTVIKELTK-EGFLEEVEEKGN  312 (397)
T ss_dssp             TCCC---SEE--EECGGGGTTSCCEEEEECSTTC-CCCTTSSC--CSSTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHH
T ss_pred             CCCC---Cee--eeccccCCCcCeEEEEEchHhc-ccCCCCcC--CCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHH
Confidence            6544   665  88999973  358888887765 44322222  2334689999999999988766 468899999999


Q ss_pred             HHHHHhhccc-ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        351 TMHSLLSQHK-VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       351 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      ++.+.|+++. ..+.+... ++.+.++++.+....       ...++.+.|.++||.+.+..         ++.+|++++
T Consensus       313 ~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~---------~~~iRis~~  375 (397)
T 2ord_A          313 YLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV-------SNREVATKCFENKLLVVPAG---------NNTIRFLPP  375 (397)
T ss_dssp             HHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-------CHHHHHHHHHHTTEECEEET---------TTEEEECCC
T ss_pred             HHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH-------HHHHHHHHHHHCCCEEccCC---------CCEEEEECC
Confidence            9999998731 11222211 335678888876543       35678999999999988653         478999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..+|++|+++++++|++++++
T Consensus       376 ~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          376 LTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHhh
Confidence            899999999999999998764

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=100.00  E-value=3.8e-37  Score=309.99  Aligned_cols=344  Identities=11%  Similarity=0.054  Sum_probs=253.2

Q ss_pred             eecCCCcEEEE--CCeeeEEeecCC---ccCCCCChhhH-H-HHHH---HHHhcCCCCCCCCCcccChHHHHHHHHHHHh
Q psy15447         67 VDQKSGYIVNI--NGIPCINFATHN---YLSFVENPDIE-K-CAID---CIDKNGVGSCGPRGFYGTNVVHLDLENDIAS  136 (457)
Q Consensus        67 i~~~~g~~~~~--~G~~~id~~s~~---~l~~~~~p~i~-~-a~~~---~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~  136 (457)
                      +++++|+++|+  ||++|+||+++.   .+|+ +||++. + |+.+   ++.+..+.  ++   .+..+...+++++|++
T Consensus        39 ~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~~~--~~---~~~~~~~~~la~~la~  112 (449)
T 2cjg_A           39 LTRSGGSYLVDAITGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNKPS--NS---DVYSVAMARFVETFAR  112 (449)
T ss_dssp             TTTCBBTEEEBTTTCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCCCC--TT---TCCCHHHHHHHHHHHH
T ss_pred             EeeeeeCEEEECCCCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcCCC--Cc---ccCCHHHHHHHHHHHH
Confidence            46999999984  899999997653   4455 389999 9 9999   88775321  11   1356788999999999


Q ss_pred             hcC---CCcEEEecccHHHHHHHHHhhc---C----------C-CCEEEEe-CcccHHHHHHHHhcCC------------
Q psy15447        137 FMG---LEETALYSFGFSTSASAIAAYV---K----------R-NDAVFVD-ENINFAIQTGLIASRC------------  186 (457)
Q Consensus       137 ~~g---~~~~i~~~sG~~a~~~ai~a~~---~----------~-gd~v~~~-~~~h~~~~~~~~~~g~------------  186 (457)
                      +++   .+++++++||++|+..+++++.   +          + ++.|++. ..+|+.+..++...+.            
T Consensus       113 ~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~  192 (449)
T 2cjg_A          113 VLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFD  192 (449)
T ss_dssp             HHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCC
T ss_pred             hcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCC
Confidence            984   5678899999999999997543   2          1 6655554 4577765544444432            


Q ss_pred             -eEEEecCCC--HHH-------------HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHc
Q psy15447        187 -KVQYFKHNN--MQH-------------LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKY  246 (457)
Q Consensus       187 -~~~~~~~~d--~~~-------------le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~  246 (457)
                       .+..++++|  .+.             |++.+++..        +++++|++||++|++|.+.+    +++|+++|++|
T Consensus       193 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~--------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~  264 (449)
T 2cjg_A          193 WPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRP--------HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF  264 (449)
T ss_dssp             CCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHST--------TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT
T ss_pred             CCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcC--------CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC
Confidence             566677766  433             777775422        46789999999999998777    99999999999


Q ss_pred             CcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHh--hC-CcceecCCCcH
Q psy15447        247 QARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRL--SG-SGYCFSASLPP  322 (457)
Q Consensus       247 g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~--~~-~~~~~~~~~~~  322 (457)
                      |++||+||+|+.  +|++|.+ ..+++++.|   |++  |+||++  +.|++++++++++.+.+  .. .....+.+.++
T Consensus       265 g~lli~DEv~~g--~g~~g~~~~~~~~~~~~---di~--t~sK~l--~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~  335 (449)
T 2cjg_A          265 DALLIFDEVQTG--CGLTGTAWAYQQLDVAP---DIV--AFGKKT--QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNL  335 (449)
T ss_dssp             TCEEEEECTTTT--TTTTSSSSTHHHHTCCC---SEE--EECGGG--SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCH
T ss_pred             CcEEEEeccccC--CCccCcceeecccCCCc---eEE--EecCcc--cEEEEEECHHHhhhhhhcccCCcccccCCCCCH
Confidence            999999999972  3344443 346677766   665  899999  67788888888775221  01 11223344689


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc-ccCC-eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK-VTQR-FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC  400 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  400 (457)
                      ++++++.++++.+++ +++.++++++++++++.|+++. ..+. +... ++.+.++++.+....       ...++++.|
T Consensus       336 ~~~~aa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~~~-------~~~~~~~~l  406 (449)
T 2cjg_A          336 TDMVRARRILEVIEA-EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPTTA-------DRDELIRQL  406 (449)
T ss_dssp             HHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSSHH-------HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECChH-------HHHHHHHHH
Confidence            999999999998765 3578999999999999998732 1233 3332 345778887775422       456799999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +++||++.+.+         .+++|++|+..+|++|+++++++|+++++++
T Consensus       407 ~~~Gv~v~~~g---------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          407 WQRAVIVLPAG---------ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             HHTTEECEEET---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCeEEecCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999988653         4799999999999999999999999998764

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=1.1e-36  Score=302.76  Aligned_cols=348  Identities=16%  Similarity=0.189  Sum_probs=264.4

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|.++++++|.++|. +|++|+||+++   +++|+ ++|++.+++.+++.++...+.     ....+...++++++++++
T Consensus        21 ~~~~~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~~~la~~~   94 (406)
T 4adb_A           21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGN-----GYTNEPVLRLAKKLIDAT   94 (406)
T ss_dssp             CSSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCT-----TSCCHHHHHHHHHHHHHS
T ss_pred             CCceEEeeccCEEEeCCCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccC-----CcCCHHHHHHHHHHHhhC
Confidence            477899999999995 99999999987   78888 589999999999987433221     124677899999999999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhcC-------CC-CEEE-EeCcccHHHHHHHHhcC------------CeEEEecCCCHH
Q psy15447        139 GLEETALYSFGFSTSASAIAAYVK-------RN-DAVF-VDENINFAIQTGLIASR------------CKVQYFKHNNMQ  197 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~~-------~g-d~v~-~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~  197 (457)
                      |.+.++++++|++|+..+++++..       +| |.|+ .+..+|+.........+            ..+..++++|++
T Consensus        95 ~~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  174 (406)
T 4adb_A           95 FADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDIN  174 (406)
T ss_dssp             SCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHH
T ss_pred             CCCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHH
Confidence            999999999999999999998753       33 5554 55556766666665554            467788889999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC-----ChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccc
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC-----PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEY  271 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~-----~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~  271 (457)
                      ++++.++           +++++|+++|. |++|.+.     ++++|+++|++||++||+||+|+ | ++..|..+ .+.
T Consensus       175 ~l~~~l~-----------~~~~~v~~~p~-np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~-~~~~g~~~~~~~  240 (406)
T 4adb_A          175 SASALID-----------DSTCAVIVEPI-QGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-G-VGRTGELYAYMH  240 (406)
T ss_dssp             HHHTTCS-----------TTEEEEEECSE-ETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-T-TTTTSSSSHHHH
T ss_pred             HHHHHhc-----------CCeEEEEEeCC-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-C-CCccchhHHHHh
Confidence            9988774           35678888854 5666543     48999999999999999999996 2 34444433 355


Q ss_pred             cCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447        272 FGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC  349 (457)
Q Consensus       272 ~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~  349 (457)
                      +++.+   |++  ||||++|+  ++|++++++++++.+.......++  +.+++.++++.++++.++. +++.+++++++
T Consensus       241 ~~~~~---d~~--t~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~  312 (406)
T 4adb_A          241 YGVTP---DLL--TTAKALGGGFPVGALLATEECARVMTVGTHGTTY--GGNPLASAVAGKVLELINT-PEMLNGVKQRH  312 (406)
T ss_dssp             HTCCC---SEE--EECGGGGTTSCCEEEEECHHHHHTCCTTSSCCSS--TTCHHHHHHHHHHHHHHSS-HHHHHHHHHHH
T ss_pred             cCCCC---CEE--EechhhcCCCCeEEEEEcHHHHhhhccCCcCCCC--CCCHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Confidence            66655   666  78999973  369999999998877654333333  4689999999999988754 56889999999


Q ss_pred             HHHHHHhhcccc-cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        350 NTMHSLLSQHKV-TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       350 ~~l~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      +++.+.|+++.. ...+.. .+..+.++++.+......     ...++++.|.++||.+.+..         .+++|+++
T Consensus       313 ~~l~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~~~---------~~~iRi~~  377 (406)
T 4adb_A          313 DWFVERLNTINHRYGLFSE-VRGLGLLIGCVLNADYAG-----QAKQISQEAAKAGVMVLIAG---------GNVVRFAP  377 (406)
T ss_dssp             HHHHHHHHHHHHHHCCEEE-EEEETTEEEEEECTTTTT-----CHHHHHHHHHHTTEECEESS---------TTEEEECC
T ss_pred             HHHHHHHHHHHHhCCCceE-EEEEEEEEEEEEeCCcHH-----HHHHHHHHHHHCCcEEeecC---------CCeEEEEC
Confidence            999999987321 111111 123477888887753100     24578999999999988643         47999999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +..+|++|+++++++|+++++++..
T Consensus       378 ~~~~~~e~i~~~~~~l~~~l~~~~~  402 (406)
T 4adb_A          378 ALNVSEEEVTTGLDRFAAACEHFVS  402 (406)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999987754

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.3e-37  Score=304.47  Aligned_cols=357  Identities=13%  Similarity=0.106  Sum_probs=268.7

Q ss_pred             eeecCCCcEEEECCee----eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-
Q psy15447         66 VVDQKSGYIVNINGIP----CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-  140 (457)
Q Consensus        66 ~i~~~~g~~~~~~G~~----~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-  140 (457)
                      ++..++|.+++.+|++    +|||+++++.++..+|++++++.+++.+.+..  ++....|..+++.++++.+++++|. 
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~l~~~l~~~~g~~   98 (407)
T 3nra_A           21 VRQSAAGLEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQ--AYTEYRGDLGIRDLLAPRLAAFTGAP   98 (407)
T ss_dssp             ------CCTTTCCSCCCCSCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHH--HSCCTTCCHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHhhhhHHHhhcCCCCCceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCC--CcCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            4566777777766655    99999998887888999999999999863221  1222346788999999999999886 


Q ss_pred             ----CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----------CCHHHHHHHHHh
Q psy15447        141 ----EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----------NNMQHLEELLRQ  205 (457)
Q Consensus       141 ----~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----------~d~~~le~~l~~  205 (457)
                          +.++++++|++|+..++.+++++||.|+++.++|.++...++..|.++..+++           .|++++++.+++
T Consensus        99 ~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  178 (407)
T 3nra_A           99 VDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA  178 (407)
T ss_dssp             CCTTTSEEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT
T ss_pred             CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh
Confidence                57888889999999999999999999999999999999999999999988876           279999998864


Q ss_pred             hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEE
Q psy15447        206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMI  282 (457)
Q Consensus       206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~  282 (457)
                                 ++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++..+.......+....+.+++
T Consensus       179 -----------~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~  247 (407)
T 3nra_A          179 -----------GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVT  247 (407)
T ss_dssp             -----------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEE
T ss_pred             -----------CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEE
Confidence                       3357777888999999999   89999999999999999999987666532222222222011345699


Q ss_pred             EecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhc
Q psy15447        283 IGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       283 ~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~  358 (457)
                      ++|+||++|..|   ||+++++++++.++.....+.+  +.+++.++++.++++...+ .++.+++++++.+++.+.|++
T Consensus       248 ~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  325 (407)
T 3nra_A          248 IMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIVSL--RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRG  325 (407)
T ss_dssp             EECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHHTS--SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhhcc--CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998655   9999999999888765433333  3467776666666542111 134677888889999999988


Q ss_pred             ccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                         .+++.+..+..+.++++.+.. ..       ...++.+.|++ +||++.++..+.   +...+++|++++.  |+++
T Consensus       326 ---~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~--~~~~  390 (407)
T 3nra_A          326 ---CEGVFARTPQAGSYLFPRLPKLAV-------APAEFVKILRLQAGVVVTPGTEFS---PHTADSVRLNFSQ--DHEA  390 (407)
T ss_dssp             ---STTCBCCCCSBSSEECCBCCCBSS-------CHHHHHHHHHHHHCEECEEGGGTC---TTCTTBEEEECCS--CHHH
T ss_pred             ---CCCceeccCCeeEEEEEeCCCCCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEeCC--CHHH
Confidence               457776545556777777664 22       34578888876 599999876542   2346899999984  9999


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy15447        437 MNSLIETLCKSHDIAV  452 (457)
Q Consensus       437 i~~~~~~l~~~~~~~~  452 (457)
                      +++++++|++++++++
T Consensus       391 i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          391 AVAAARRIVTLVERYR  406 (407)
T ss_dssp             HHHHHHHHHHHHHHHB
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988764

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=5.9e-36  Score=298.86  Aligned_cols=343  Identities=15%  Similarity=0.127  Sum_probs=251.1

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCC---ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHN---YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~---~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++.+++|+++|. +|++|+||+++.   ++|++.+|++.+|+.+++++... ++ .  ..+..+...++++++++++
T Consensus        24 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~-~~-~--~~~~~~~~~~l~~~la~~~   99 (419)
T 2eo5_A           24 FPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAH-AA-A--NDFYNIPQLELAKKLVTYS   99 (419)
T ss_dssp             CCCCEEEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCC-CS-C--SCSCCHHHHHHHHHHHHHS
T ss_pred             CCceEEeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCcc-cc-c--cccCCHHHHHHHHHHHHhC
Confidence            477889999999995 999999998864   55654489999999999987532 11 1  1235677899999999999


Q ss_pred             CC---CcEEEecccHHHHHHHHHhhcC-CCCEEEEe-CcccHHHHHHHHhcC-------------CeEEEecCC------
Q psy15447        139 GL---EETALYSFGFSTSASAIAAYVK-RNDAVFVD-ENINFAIQTGLIASR-------------CKVQYFKHN------  194 (457)
Q Consensus       139 g~---~~~i~~~sG~~a~~~ai~a~~~-~gd~v~~~-~~~h~~~~~~~~~~g-------------~~~~~~~~~------  194 (457)
                      |.   ++++++++|++|+..+++++.. +||.|++. ..+|+.+.....+.+             ..+..++.+      
T Consensus       100 ~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  179 (419)
T 2eo5_A          100 PGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNP  179 (419)
T ss_dssp             SCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCT
T ss_pred             CCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcccccc
Confidence            85   3678888999999999987654 26666554 457776666655433             235555543      


Q ss_pred             ---------------CHHHHH-HHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q psy15447        195 ---------------NMQHLE-ELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDE  254 (457)
Q Consensus       195 ---------------d~~~le-~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DE  254 (457)
                                     |+++++ +.+++..      +++++++|+++|+++++|.+.|    +++|+++|++||++||+||
T Consensus       180 ~g~~~~~~~~~~~~~~~~~l~~~~i~~~~------~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE  253 (419)
T 2eo5_A          180 WHINGYENPSELVNRVIEFIEDYIFVNLV------PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDE  253 (419)
T ss_dssp             TCCCTTTCHHHHHHHHHHHHHHTHHHHTC------CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEEC
T ss_pred             ccccccccchhhHHHHHHHHHHHHHhhcc------CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence                           256777 7775421      0135679999999888998766    9999999999999999999


Q ss_pred             Ccc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHH
Q psy15447        255 SVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANK  330 (457)
Q Consensus       255 a~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a  330 (457)
                      +|+ +|..|.  .+..+++++.|   |++  ||||++|+   +.|+++++++++ .+ ...  ...+.+.++++++++.+
T Consensus       254 ~~~~~g~~g~--~~~~~~~~~~~---d~~--t~sK~~~~G~~riG~~~~~~~~~-~~-~~~--~~~t~~~n~~~~~aa~a  322 (419)
T 2eo5_A          254 VQMGLGRTGK--LFAIENFNTVP---DVI--TLAKALGGGIMPIGATIFRKDLD-FK-PGM--HSNTFGGNALACAIGSK  322 (419)
T ss_dssp             TTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTTTSCCEEEEEEGGGC-CC---------CCCCCHHHHHHHHH
T ss_pred             cccCCccCcc--hhhHHhcCCCC---CEE--EecccccCCccceEEEEEchHhh-cC-Ccc--cCCCCCCCHHHHHHHHH
Confidence            997 544432  12345667655   565  89999974   228999988876 55 222  22334569999999999


Q ss_pred             HHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc
Q psy15447        331 ALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP  410 (457)
Q Consensus       331 ~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~  410 (457)
                      +++.+++   +.++++++++++.+.|+++     +... ++.+.++++.+....      .... +++.|+++||++++.
T Consensus       323 al~~~~~---~~~~~~~~~~~l~~~L~~~-----~~~~-~~~g~~~~i~~~~~~------~~~~-~~~~l~~~Gv~v~~~  386 (419)
T 2eo5_A          323 VIDIVKD---LLPHVNEIGKIFAEELQGL-----ADDV-RGIGLAWGLEYNEKK------VRDR-IIGESFKRGLLLLPA  386 (419)
T ss_dssp             HHHHHHH---HHHHHHHHHHHHHHHHTTS-----SSEE-EEETTEEEEECSCHH------HHHH-HHHHHHHTTEECEEE
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHh-----hhhe-EeeeEEEEEEEecCc------cHHH-HHHHHHHCCCEEecC
Confidence            9988754   7889999999999999882     2111 345778888774211      1345 889999999999875


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .         .+++||+++..+|++|+++++++|+++++++
T Consensus       387 ~---------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          387 G---------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV  418 (419)
T ss_dssp             T---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             C---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3         4789999999999999999999999988764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=3.4e-35  Score=293.52  Aligned_cols=353  Identities=12%  Similarity=0.087  Sum_probs=265.0

Q ss_pred             CceeeecCCCcEEEE-C--CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVNI-N--GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~--G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .+++..+++|+++|+ +  |++||||..++. .+..+|++.+++.+++.+...++..     ...+...++++.+++.+|
T Consensus        41 ~~~~~~~g~g~~~~d~~~~g~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~-----~~~~l~~~l~~~l~~~~g  114 (421)
T 3l8a_A           41 TTRPDRLNQFTYKWKTSENNPELLQMWVADM-DFLPVPEIKEAIINYGREHIFGYNY-----FNDDLYQAVIDWERKEHD  114 (421)
T ss_dssp             SCCCCCTTTTBTTTGGGTTCTTCEECCSSCC-CSCCCHHHHHHHHHHHHHCCSSCBC-----CCHHHHHHHHHHHHHHHC
T ss_pred             CcccccCCCCCccccccCCCCCeeecccCCC-CCCCCHHHHHHHHHHHhcCCcCCCC-----CCHHHHHHHHHHHHHHhC
Confidence            456677899999994 6  899999977653 5557899999999999873222211     136777888888888777


Q ss_pred             ----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhc
Q psy15447        140 ----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQD  207 (457)
Q Consensus       140 ----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~  207 (457)
                          .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+        |++++++.+++  
T Consensus       115 ~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~--  192 (421)
T 3l8a_A          115 YAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID--  192 (421)
T ss_dssp             CCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH--
T ss_pred             CCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc--
Confidence                3457777888899999999999999999999999999888888899888877643        89999999974  


Q ss_pred             hhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCccEE
Q psy15447        208 ERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVDMI  282 (457)
Q Consensus       208 ~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~Di~  282 (457)
                              +++++|++++++|++|.+.|   +++|+++|++||++||+||+|+.+.+  +|........+.+  .+.+++
T Consensus       193 --------~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~--~g~~~~~~~~~~~~~~~~~i~  262 (421)
T 3l8a_A          193 --------NNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLAL--FGNTHHSLNTLDASYKDFTII  262 (421)
T ss_dssp             --------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC--TTCCCCCGGGSCTTGGGTEEE
T ss_pred             --------cCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccccccc--CCCCCccHHHcCchhcCcEEE
Confidence                    35678889999999998854   88999999999999999999975433  2332222223322  245688


Q ss_pred             EecCcccccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhh
Q psy15447        283 IGSLEHALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       283 ~~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~  357 (457)
                      +.|+||++|..|   |+++++ +++++.+......+.+ .+.++++++++.++++..++ .++++++++++.+++.+.|+
T Consensus       263 ~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~-~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~  341 (421)
T 3l8a_A          263 LSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQ-HEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELE  341 (421)
T ss_dssp             EECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTC-SCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhccc-CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999997554   898887 8888877654322222 24688999999888875332 24567888889999999998


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      +   .+++.+..+..+.+.++.+... .       ...++.+.|+++ ||++.++..+.   ....+++||+++  ++++
T Consensus       342 ~---~~~i~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~--~~~~  406 (421)
T 3l8a_A          342 A---KTKIKVMEPEGTYLVWLDFSAYAI-------AQPQLSEKLQNEAKVVLNDGAHFG---KEGKYFARLNVA--TPKN  406 (421)
T ss_dssp             H---HCSCEEECCSBSSEEEEECGGGTC-------CTTHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECC--SCHH
T ss_pred             h---CCCceEeCCCeeEEEEEeccccCC-------CHHHHHHHHHHhCCEEEECchhhC---CCCCCEEEEEec--CCHH
Confidence            7   3677776555556666877641 1       234688888765 99998765432   123689999988  5999


Q ss_pred             HHHHHHHHHHHHHH
Q psy15447        436 DMNSLIETLCKSHD  449 (457)
Q Consensus       436 di~~~~~~l~~~~~  449 (457)
                      ++++++++|+++++
T Consensus       407 ~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          407 TVQEALSRIISVFG  420 (421)
T ss_dssp             HHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998764

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=4.6e-35  Score=289.37  Aligned_cols=357  Identities=11%  Similarity=0.000  Sum_probs=265.4

Q ss_pred             eeeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----
Q psy15447         65 YVVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----  139 (457)
Q Consensus        65 ~~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----  139 (457)
                      ++..+++|.++| .+|+++|||..++. .+..+|++.+++.+++.+...++...     ..+..+++++.+++.+|    
T Consensus        11 ~~~~~~~g~~~~d~~g~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~~~-----~~~l~~~la~~l~~~~g~~~~   84 (391)
T 3dzz_A           11 HVPKRQGNSIKWGVLKEKELPMWIAEM-DFKIAPEIMASMEEKLKVAAFGYESV-----PAEYYKAVADWEEIEHRARPK   84 (391)
T ss_dssp             SCCCCCTTBTTTTTCCTTCEECCSSCC-SSCCCHHHHHHHHHHHTTCCCCCBCC-----CHHHHHHHHHHHHHHHSCCCC
T ss_pred             hhccCCCCccceeccCCCceeccccCC-CCCCCHHHHHHHHHHHhcCcCCCCCC-----CHHHHHHHHHHHHHHhCCCCC
Confidence            556688999999 59999999987753 55678999999999987632222111     46677778888888776    


Q ss_pred             CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcc
Q psy15447        140 LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDT  211 (457)
Q Consensus       140 ~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~  211 (457)
                      .+.++++++|++|+..++++++++||.|++..+.|.++...+...|.++..++.        .|++++++.+++      
T Consensus        85 ~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------  158 (391)
T 3dzz_A           85 EDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT------  158 (391)
T ss_dssp             GGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS------
T ss_pred             HHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc------
Confidence            446777788899999999999999999999999999999999999999988876        589999999863      


Q ss_pred             cCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcc
Q psy15447        212 LNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEH  288 (457)
Q Consensus       212 ~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK  288 (457)
                          .++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.........++....+.++++.|+||
T Consensus       159 ----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK  234 (391)
T 3dzz_A          159 ----PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSK  234 (391)
T ss_dssp             ----TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHH
T ss_pred             ----cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChh
Confidence                24578888999999999954   88999999999999999999986554321111122222110122389999999


Q ss_pred             cccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447        289 ALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQ  363 (457)
Q Consensus       289 ~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~  363 (457)
                      ++|.+|   |+++++ +++++.+........ ..+.+++.++++.++++..++ .++++++++++.+++.+.|++.  ++
T Consensus       235 ~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~  311 (391)
T 3dzz_A          235 TFNLAALHAACAIIPNPDLRARAEESFFLAG-IGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKE--VP  311 (391)
T ss_dssp             HHTCTTTCCEEEECCSHHHHHHHHHHHHHHT-CSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CT
T ss_pred             hccccchhheEEEECCHHHHHHHHHHHHhhc-cCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh--CC
Confidence            997555   999887 888888765422111 123577777777777765322 2456788888999999998871  14


Q ss_pred             CeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447        364 RFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       364 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      ++.+..+..+.+.++.+... .       ...++.+.|+ ++||.+.++..+.   ....+++|++++  ++++++++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~--~~~~~i~~~l  379 (391)
T 3dzz_A          312 EVKVLDSNASYLAWVDISALGM-------NAEDFCKYLREKTGLIISAGNGYR---GNGHEFVRINLA--CPKELVIDGM  379 (391)
T ss_dssp             TSEECCCCBSSEEEEECGGGCS-------CHHHHHHHHHHHHCEECEESGGGC---TTGGGEEEEECC--SCHHHHHHHH
T ss_pred             CcEEeccCceEEEEEehhhcCC-------CHHHHHHHHHHhCCEEEeCchhhC---CCCCCEEEEEec--CCHHHHHHHH
Confidence            77776555566666777642 2       3457889996 7899998865432   123578999988  6999999999


Q ss_pred             HHHHHHHHHhc
Q psy15447        442 ETLCKSHDIAV  452 (457)
Q Consensus       442 ~~l~~~~~~~~  452 (457)
                      ++|++++++++
T Consensus       380 ~~l~~~l~~~~  390 (391)
T 3dzz_A          380 QRLKQGVLNLN  390 (391)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHHHHHhh
Confidence            99999987654

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=5.2e-35  Score=289.67  Aligned_cols=339  Identities=14%  Similarity=0.132  Sum_probs=256.4

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++.+++|+++|+ +|++|+||+++   +++|+ .+|++.+++.+++++++..+   +. + ..+...++++++++++
T Consensus        27 ~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~-~~~~v~~a~~~~~~~~~~~~---~~-~-~~~~~~~l~~~la~~~  100 (395)
T 1vef_A           27 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGH-GNPEVVEAVKRQAETLMAMP---QT-L-PTPMRGEFYRTLTAIL  100 (395)
T ss_dssp             CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCC---TT-S-CCHHHHHHHHHHHHTS
T ss_pred             CCccEEecccCEEEeCCCCEEEEccCccccccCCC-CCHHHHHHHHHHHHhCCCCc---cc-c-CCHHHHHHHHHHHHhc
Confidence            467889999999995 99999999876   45665 58999999999998865321   11 2 4678899999999999


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc--CCCCEEE-EeCcccHHHHHHHHhcCCe------------EEEecCCCHHHHHH
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV--KRNDAVF-VDENINFAIQTGLIASRCK------------VQYFKHNNMQHLEE  201 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~--~~gd~v~-~~~~~h~~~~~~~~~~g~~------------~~~~~~~d~~~le~  201 (457)
                      |  .+.++++++|++|+..+++++.  .+++.|+ .+..+|+.....+...|.+            +..++.+|++++++
T Consensus       101 ~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~  180 (395)
T 1vef_A          101 PPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKR  180 (395)
T ss_dssp             CTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHH
T ss_pred             CCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHH
Confidence            4  5677888999999999998763  3455555 4555666666666666654            56677789999998


Q ss_pred             HHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCC
Q psy15447        202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVST  276 (457)
Q Consensus       202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~  276 (457)
                      .+++           ++++|+++|+++++|.+.|    +++|+++|++||++||+||+|+ | ++..|... .+.+++.+
T Consensus       181 ~i~~-----------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~-~~~~g~~~~~~~~~~~~  247 (395)
T 1vef_A          181 AVDE-----------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-G-MGRTGKRFAFEHFGIVP  247 (395)
T ss_dssp             HCCT-----------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-T-TTTTSSSSTHHHHTCCC
T ss_pred             Hhcc-----------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-C-CccCCchhHhhhcCCCC
Confidence            8752           4578899999999999887    9999999999999999999998 3 34444432 24455544


Q ss_pred             CCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                         |++  |+||++++  +.|++++++++++.++...  ...+.+.+++.++++.++++.+++ ++..++++++++++.+
T Consensus       248 ---d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~l~~  319 (395)
T 1vef_A          248 ---DIL--TLAKALGGGVPLGVAVMREEVARSMPKGG--HGTTFGGNPLAMAAGVAAIRYLER-TRLWERAAELGPWFME  319 (395)
T ss_dssp             ---SEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTS--SCCSSTTCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHH
T ss_pred             ---CEE--EEcccccCCCceEEEEehHHHHhhhccCC--cCCCcCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHH
Confidence               665  89999975  3488888888777665422  233445689999999999988765 3477899999999999


Q ss_pred             HhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447        355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT  433 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t  433 (457)
                      .|+++.. +.+... ++.++++++.+..+         ..++.+.|. ++||.+.+..         .+++|++++..+|
T Consensus       320 ~l~~~~~-~~~~~~-~~~g~~~~~~~~~~---------~~~l~~~l~~~~gi~v~~~~---------~~~iRi~~~~~~~  379 (395)
T 1vef_A          320 KLRAIPS-PKIREV-RGMGLMVGLELKEK---------AAPYIARLEKEHRVLALQAG---------PTVIRFLPPLVIE  379 (395)
T ss_dssp             HHHTSCC-TTEEEE-EEETTEEEEEESSC---------SHHHHHHHHHHHCEECEESS---------TTEEEECCCTTCC
T ss_pred             HHHHhhc-CceEEE-EEEEEEEEEEEcCh---------HHHHHHHHHHHCCeEEecCC---------CCEEEEeCCCCCC
Confidence            9987321 112211 34567888887642         246888998 8999988642         4789999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCKSH  448 (457)
Q Consensus       434 ~edi~~~~~~l~~~~  448 (457)
                      ++|+++++++|++++
T Consensus       380 ~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          380 KEDLERVVEAVRAVL  394 (395)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998875

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=8.5e-34  Score=278.85  Aligned_cols=334  Identities=18%  Similarity=0.182  Sum_probs=250.5

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecCCc-cCCC-CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATHNY-LSFV-ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG  139 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~~~-l~~~-~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g  139 (457)
                      .|+.+++++|.++|. +|++|+||+++.+ ..++ .+|++.+++.+++++++....    .| ..+...++++++++++|
T Consensus        10 ~~~~~~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~----~y-~~~~~~~l~~~la~~~g   84 (375)
T 2eh6_A           10 LPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSN----LY-ENPWQEELAHKLVKHFW   84 (375)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCT----TB-CCHHHHHHHHHHHHTSS
T ss_pred             CCccEEeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCc----cc-CCHHHHHHHHHHHhhcC
Confidence            477899999999985 9999999998754 3454 589999999999987643211    12 34567899999999999


Q ss_pred             C-CcEEEecccHHHHHHHHHh---hc---CCC-CEEEEeCcc-cHHHHHHHHhcCC------------eEEEecCCCHHH
Q psy15447        140 L-EETALYSFGFSTSASAIAA---YV---KRN-DAVFVDENI-NFAIQTGLIASRC------------KVQYFKHNNMQH  198 (457)
Q Consensus       140 ~-~~~i~~~sG~~a~~~ai~a---~~---~~g-d~v~~~~~~-h~~~~~~~~~~g~------------~~~~~~~~d~~~  198 (457)
                      . +.++++++|++|+..++++   +.   ++| |.|++..+. |..........+.            .+..++++|+++
T Consensus        85 ~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  164 (375)
T 2eh6_A           85 TEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDS  164 (375)
T ss_dssp             SCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHH
T ss_pred             CCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHH
Confidence            8 7888899999999999865   45   677 888777665 5544444443322            166777789999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFG  273 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~  273 (457)
                      +++.++           +++++|++++++|++|.+.|    +++|+++|++||+++|+||+|+.  +|..+... ...++
T Consensus       165 l~~~l~-----------~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~~~~~~~~~~  231 (375)
T 2eh6_A          165 VYKLLD-----------EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTG--IGRTGEFYAYQHFN  231 (375)
T ss_dssp             HHTTCC-----------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTT--TTTTSSSSGGGGGT
T ss_pred             HHHHhc-----------CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccC--CCCCCcchhhhhcC
Confidence            888774           24678899999999999988    99999999999999999999982  33333322 34455


Q ss_pred             CCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      ..+   |++  |+||++++  +.|++++++++++.++.......+  +.+++.++++.++++.++   +..+++++++++
T Consensus       232 ~~~---d~~--s~SK~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~  301 (375)
T 2eh6_A          232 LKP---DVI--ALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTF--GGNPLACRAGTVVVDEVE---KLLPHVREVGNY  301 (375)
T ss_dssp             CCC---SEE--EECGGGGTTSCCEEEEEEHHHHTTCCTTSCCCSS--TTCHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred             CCC---CEE--EEcccccCCCCeEEEEEcHHHHhhhcCCCCCCCC--CCCHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            433   666  78899974  248888888877766542222233  458888888888888775   578899999999


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS  431 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~  431 (457)
                      +.+.|+++   .....  ++.+.++++.++.+         ..++++.|.++||.+.+..         .+++|++++..
T Consensus       302 l~~~L~~~---~~~~~--~~~g~~~~~~~~~~---------~~~~~~~l~~~gi~~~~~~---------~~~iRi~~~~~  358 (375)
T 2eh6_A          302 FKEKLKEL---GKGKV--KGRGLMLGLELERE---------CKDYVLKALEKGLLINCTA---------GKVLRFLPPLI  358 (375)
T ss_dssp             HHHHHHHT---TSSEE--EEETTEEEEECSSC---------CHHHHHHHHHTTEECEEET---------TTEEEECCCTT
T ss_pred             HHHHHHHH---hcCCc--eEEEEEEEEEEcCc---------HHHHHHHHHHCCCEEecCC---------CCEEEEECCCC
Confidence            99999872   22222  34578888887643         2368888999999987642         47899999988


Q ss_pred             CCHHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCKS  447 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~  447 (457)
                      +|++|+++++++|+++
T Consensus       359 ~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          359 IQKEHIDRAISVLREI  374 (375)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999999999999875

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5.7e-34  Score=280.18  Aligned_cols=350  Identities=13%  Similarity=0.123  Sum_probs=256.9

Q ss_pred             eeecCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C
Q psy15447         66 VVDQKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L  140 (457)
Q Consensus        66 ~i~~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~  140 (457)
                      ...+++|+++| .+|+++|||+++.. .+..+|++.+++.+++.+....   +.. .+ .+..+++++.+.+.+|    .
T Consensus         8 ~~~~~~g~~~~d~~g~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~-~~-~~lr~~la~~~~~~~~~~~~~   81 (377)
T 3fdb_A            8 EDLRARNTMKWTRYGQGVLPLWVAES-DFSTCPAVLQAITDAVQREAFG---YQP-DG-SLLSQATAEFYADRYGYQARP   81 (377)
T ss_dssp             HHHHHTCCHHHHSSCTTSEECCSSCC-CSCCCHHHHHHHHHHHHTTCCS---SCC-SS-CCHHHHHHHHHHHHHCCCCCG
T ss_pred             HHhcCCCCceeeccCCCeeeecccCC-CCCCCHHHHHHHHHHHHcCCCC---CCC-CC-HHHHHHHHHHHHHHhCCCCCH
Confidence            34589999999 59999999998753 5557899999999999862222   111 23 4455555555554433    4


Q ss_pred             CcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---CHHHHHHHHHhhchhcccCCCCc
Q psy15447        141 EETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---NMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       141 ~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      +.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+   |++++++.+++           +
T Consensus        82 ~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~-----------~  150 (377)
T 3fdb_A           82 EWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGGINLHDVEKGFQA-----------G  150 (377)
T ss_dssp             GGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTSCCHHHHHHHHHT-----------T
T ss_pred             HHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCCCCHHHHHHHhcc-----------C
Confidence            577888899999999999999999999999999999988999999999998876   89999999875           2


Q ss_pred             cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC-CccccccCCCCCCccEEEecCcccccCc
Q psy15447        218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG-HGVTEYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g-~~~~~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      ++++++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  | ........+...+.++++.|+||++|..
T Consensus       151 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~  228 (377)
T 3fdb_A          151 ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFD--GQHTVAAGVSDTAASVCITITAPSKAWNIA  228 (377)
T ss_dssp             CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSS--SCCCCGGGSCHHHHHHEEEEECSTTTTTCG
T ss_pred             CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcC--CCCCcccHHHccCCCcEEEEEeChHhccCc
Confidence            457777788999999987   667888899999999999999865443  2 1111222221123458899999999755


Q ss_pred             c---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        294 G---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       294 g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      |   ||++. ++++++.+.....  ..+.+.+++.++++.++++..++ .++++++++++.+++.+.|++.  ++++.+.
T Consensus       229 G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~  304 (377)
T 3fdb_A          229 GLKCAQIIFSNPSDAEHWQQLSP--VIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKR--IPGAKIT  304 (377)
T ss_dssp             GGCCEEEECCSHHHHHHHHHSCH--HHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--STTCEEC
T ss_pred             chhheEEEeCCHHHHHHHHHHHH--hhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhh--CCCceEe
Confidence            5   87654 7888888865432  22345688888888888875322 2456788889999999999772  2478776


Q ss_pred             ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      .+..+.+.++.+....       ...++++.|+++ ||++.++..+..   ...+++|++++.  +++++++++++|+++
T Consensus       305 ~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~~Ris~~~--~~e~i~~~l~~l~~~  372 (377)
T 3fdb_A          305 PMQATYLMWIDFRDTT-------IEGSPSEFFIEKAKVAMNDGAWFGE---DGTGFCRLNFAT--SREVLEEAIDRMAKA  372 (377)
T ss_dssp             CCSBCSEEEEECTTSC-------CCSCHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred             cCCeeEEEEEECcccC-------CCHHHHHHHHHhCCEEecCChhccC---CCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence            5555666678776531       113567777776 999988764321   235899999884  899999999999998


Q ss_pred             HHH
Q psy15447        448 HDI  450 (457)
Q Consensus       448 ~~~  450 (457)
                      +++
T Consensus       373 l~~  375 (377)
T 3fdb_A          373 VSH  375 (377)
T ss_dssp             HTT
T ss_pred             Hhh
Confidence            764

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=6.7e-33  Score=270.25  Aligned_cols=333  Identities=14%  Similarity=0.061  Sum_probs=257.0

Q ss_pred             CCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEec
Q psy15447         71 SGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYS  147 (457)
Q Consensus        71 ~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~  147 (457)
                      +|.+++ .+|+++|||+++.. .+..+|++.+++.+++.+.. .       | ..+...++++++++++|.  +.+++++
T Consensus         6 ~~~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~-~-------y-~~~~~~~l~~~la~~~~~~~~~i~~~~   75 (354)
T 3ly1_A            6 ESAAFTAPSTDNPIRINFNEN-PLGMSPKAQAAARDAVVKAN-R-------Y-AKNEILMLGNKLAAHHQVEAPSILLTA   75 (354)
T ss_dssp             ---CCCCCCSSSCEECSSCCC-SSCCCHHHHHHHHHTGGGTT-S-------C-CHHHHHHHHHHHHHHTTSCGGGEEEES
T ss_pred             ccccccCCCCCceEEccCCCC-CCCCCHHHHHHHHHHHhhCc-C-------C-CCCchHHHHHHHHHHhCCChHHEEEeC
Confidence            444555 48899999998753 45568999999999887521 1       1 245678999999999994  4678888


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      +|++|+..++.+++++||.|++..++|..+...++..|.++..++.+     |++++++.+++.         +++++|+
T Consensus        76 g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~---------~~~~~v~  146 (354)
T 3ly1_A           76 GSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAY---------SGPSIVY  146 (354)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTC---------SSCEEEE
T ss_pred             ChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccC---------CCCCEEE
Confidence            89999999999999999999999999999999999999999999887     899999999741         2457888


Q ss_pred             EecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447        223 VEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      +++++||+|.+.|.+++.++|+.  ||+++|+||+|+.+.++..........+.. .+.+++++|+||++|..|   |++
T Consensus       147 l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~  225 (354)
T 3ly1_A          147 LVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQG-AENIILLKTFSKIHAMAGMRVGYA  225 (354)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTT-CSSEEEEEESSSTTCCGGGCCEEE
T ss_pred             EeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhc-CCCEEEEeeChhhccChhhhheee
Confidence            88999999999998888888877  999999999998654433222222222111 134688999999998555   999


Q ss_pred             EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      ++++++++.++.....    .+.+++.++++.++++..+..++.+++++++.+++.+.|++    .++.+. ++.+.+++
T Consensus       226 ~~~~~~~~~~~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~-~~~~~~~~  296 (354)
T 3ly1_A          226 VAHPTVIALMGRYVAG----EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALED----LKLPYL-PSEGNFVF  296 (354)
T ss_dssp             ECCHHHHHHHGGGTTC----SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH----HTCCBC-CCCSSEEE
T ss_pred             ecCHHHHHHHHHhcCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCeEC-CCCceEEE
Confidence            9999999988765443    35688888888888764433345778888999999999988    366654 45677888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +.++.+         ..++.+.|.++||.+. +.++     ...+++|++++   |++|+++++++|+++++.
T Consensus       297 ~~~~~~---------~~~~~~~l~~~gi~v~-g~~~-----~~~~~iRis~~---~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          297 HQLVVP---------LKDYQTHMADAGVLIG-RAFP-----PADNWCRISLG---TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             EECSSC---------HHHHHHHHHHTTEECC-CCCT-----TCTTEEEEECC---CHHHHHHHHHHHHHHHHT
T ss_pred             EECCCC---------HHHHHHHHHHCCEEEe-ecCC-----CCCCEEEEEcC---CHHHHHHHHHHHHHHHHh
Confidence            877642         3478889999999988 5442     34689999975   899999999999998764

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=1.7e-33  Score=278.14  Aligned_cols=349  Identities=12%  Similarity=0.034  Sum_probs=261.1

Q ss_pred             eeeecCCCcEEEE-CC-----eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         65 YVVDQKSGYIVNI-NG-----IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        65 ~~i~~~~g~~~~~-~G-----~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      +...+++|+++|. +|     +.++||.+++. ++..+|++.+++.+++.+...++.     .+..+...++++.+++++
T Consensus        11 ~~~~~~~g~~~~d~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~-----~~~~~~~~~l~~~l~~~~   84 (391)
T 4dq6_A           11 IVDRSNNFSSKWSEMEKKYGTNDLLPMWVADM-DFKAAPCIIDSLKNRLEQEIYGYT-----TRPDSYNESIVNWLYRRH   84 (391)
T ss_dssp             CCCCTTTTBHHHHCHHHHHSCSCSEECCSSSC-SSCCCHHHHHHHHHHHTTCCCCCB-----CCCHHHHHHHHHHHHHHH
T ss_pred             ccccccCCceeeeecccccCCCCceeccccCC-CCCCCHHHHHHHHHHHhCCCCCCC-----CCCHHHHHHHHHHHHHHh
Confidence            4455789999984 54     45599998763 556689999999999976322211     135788889999999988


Q ss_pred             C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---------CHHHHHHHHHh
Q psy15447        139 G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---------NMQHLEELLRQ  205 (457)
Q Consensus       139 g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~~~le~~l~~  205 (457)
                      |    .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.+         |++++++.+++
T Consensus        85 g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  164 (391)
T 4dq6_A           85 NWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD  164 (391)
T ss_dssp             CCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT
T ss_pred             CCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc
Confidence            7    4467888899999999999999999999999999999999999999999888765         78888887743


Q ss_pred             hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447        206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD  280 (457)
Q Consensus       206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D  280 (457)
                                  +++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |........+.+  .+.+
T Consensus       165 ------------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~  230 (391)
T 4dq6_A          165 ------------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILK--KHKHIPMASISKEFEKNT  230 (391)
T ss_dssp             ------------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHHTE
T ss_pred             ------------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccC--CCCccCHHHcCccccCcE
Confidence                        468888889999999965   789999999999999999999865443  222222222222  1334


Q ss_pred             EEEecCcccccCcc---cEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHH
Q psy15447        281 MIIGSLEHALGSVG---GFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       281 i~~~s~sK~lg~~g---G~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~  355 (457)
                      +++.|+||++|.+|   |++++++ ++++.+......+. ..+.+++.++++.++++..++ .++.+++++++.+++.+.
T Consensus       231 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  309 (391)
T 4dq6_A          231 ITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRID-IKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKY  309 (391)
T ss_dssp             EEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT-CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhc-CCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999997554   8988775 78877765422221 224588888888888765322 235677888899999998


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHT  433 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t  433 (457)
                      |++.  ++++.+..+..+.+.++.++. ..       ...++.+.|.++ ||.++++..+.   ....+++|++++  ++
T Consensus       310 l~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~--~~  375 (391)
T 4dq6_A          310 INEN--MPKLKVRKPEGTYLLWVDFSALGL-------SDEELESILVQKGKVALNQGNSFG---IGGSGYQRINLA--CP  375 (391)
T ss_dssp             HHHH--CTTSEECCCSBSSEEEEECGGGCC-------CHHHHHHHHHHTTCEECEEGGGGC---TTCTTEEEEECC--SC
T ss_pred             HHhh--CCCCEecCCCccEEEEEEhhhcCC-------CHHHHHHHHHHhCCEEeeCchhhC---CCCCCeEEEEEc--CC
Confidence            8761  257777655556666677764 22       356789999998 99998865432   123589999988  68


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCKSH  448 (457)
Q Consensus       434 ~edi~~~~~~l~~~~  448 (457)
                      ++++++++++|++++
T Consensus       376 ~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          376 RSMLEEALIRIKNAI  390 (391)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998875

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=8.2e-33  Score=272.04  Aligned_cols=332  Identities=13%  Similarity=0.073  Sum_probs=246.2

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CCC-----cEEEecc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GLE-----ETALYSF  148 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-----~~i~~~s  148 (457)
                      +|+++|||+++.+ .++.+|++.+++.+++++...      ..|+......++++.+++++    |.+     .++++++
T Consensus        23 ~g~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~------~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g   95 (376)
T 2dou_A           23 RGVGLIDLSIGST-DLPPPEAPLKALAEALNDPTT------YGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG   95 (376)
T ss_dssp             TTCCCEECSSCCC-CCCCCHHHHHHHHHHTTCGGG------SSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred             cCCCEEeccCCCC-CCCCCHHHHHHHHHHHhCCCc------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence            4788999988765 555689999999998865211      12233345677888888876    753     5677777


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      |++|+..++++++++||.|++..+.|..+...++..|.++..++.     .|++++++.+..           ++++|++
T Consensus        96 ~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~l  164 (376)
T 2dou_A           96 SQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEGVWR-----------EAKVLLL  164 (376)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHH-----------HEEEEEE
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhcc-----------CceEEEE
Confidence            889999999999999999999999999998888889999888874     367888888753           3467777


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      ++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++..........+.  .+.+++++|+||++|.+|   ||+
T Consensus       165 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~  242 (376)
T 2dou_A          165 NYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGA--KERVVELFSLSKSYNLAGFRLGFA  242 (376)
T ss_dssp             CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTG--GGTEEEEEEHHHHHTCGGGCCEEE
T ss_pred             CCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCC--CCcEEEEecchhhcCChhheeEEE
Confidence            788999999988   678999999999999999999876543211222222221  234788999999997555   999


Q ss_pred             EecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      ++++++++.++.....+.+  +.+++.++++.++++..+ ..++.+++++++.+++.+.|++    . +.+..+..+.++
T Consensus       243 ~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~-~~~~~~~~~~~~  315 (376)
T 2dou_A          243 LGSEEALARLERVKGVIDF--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG----V-LSLLPPRATMYL  315 (376)
T ss_dssp             EECHHHHHHHHHHHHHHCC--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT----T-SEECCCCBSSEE
T ss_pred             ecCHHHHHHHHHHHHhccc--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----h-cCccCCCeeEEE
Confidence            9999999888654333333  347788888877775421 1234667888899999999988    3 555534446678


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ++.++...       ...++.+.|.++||.+.++..+..   ...+++|++++.  +++++++++++|++++
T Consensus       316 ~~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~f~~---~~~~~~Ris~~~--~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          316 WGRLPEGV-------DDLEFGLRLVERGVALAPGRGFGP---GGKGFVRIALVR--PLEELLEAAKRIREAL  375 (376)
T ss_dssp             EEECCTTC-------CHHHHHHHHHHTTEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHTC
T ss_pred             EEECCCCC-------CHHHHHHHHHHCCEEEcCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence            88876543       345789999999999988654321   135799999974  8999999999998764

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=1.8e-32  Score=270.69  Aligned_cols=338  Identities=11%  Similarity=0.097  Sum_probs=246.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      +|++++||+++.+ .++.+|.+.+++.+++++....   +....|..+...++++.+.+.+|    .+.++++++|++|+
T Consensus        28 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~  103 (388)
T 1j32_A           28 EGIDVCSFSAGEP-DFNTPKHIVEAAKAALEQGKTR---YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI  103 (388)
T ss_dssp             TTCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred             cCCCEEECCCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHH
Confidence            5788999998765 4556789999999998752111   22223445555555555555445    34677788889999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..+.|.++...++..|.++..++.+       |++++++.+++           ++++|+++++
T Consensus       104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p  172 (388)
T 1j32_A          104 FNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP-----------KTKLLVFNTP  172 (388)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT-----------TEEEEEEESS
T ss_pred             HHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc-----------CceEEEEeCC
Confidence            99999999999999999999999988889999998887753       67888877742           4578888899


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCccEEEecCcccccCcc---cEEE
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +||+|.+.|   +++|+++|++||+++|+||+|+.+.++.  ........+.+  .+.|+++.|+||++|++|   |+++
T Consensus       173 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~  250 (388)
T 1j32_A          173 SNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDD--AQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA  250 (388)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence            999999977   8899999999999999999998765532  11111122221  235899999999998555   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++++.+........  .+.+++.++++.++++...+ .++++++++++.+++.+.|++   .+++.+..+..+.+++
T Consensus       251 ~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~  325 (388)
T 1j32_A          251 GPVPLVKAATKIQGHST--SNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA---MPGLECPKPDGAFYMF  325 (388)
T ss_dssp             CCHHHHHHHHHHHHTTT--CSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT---CTTCBCCCCCBTTEEC
T ss_pred             eCHHHHHHHHHHHhhcc--cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhh---CCCCcccCCCeeEEEE
Confidence            99998888765432222  23477777777777753211 234677888999999999988   4577665444455555


Q ss_pred             EEecC-CcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        378 LYLQK-SDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       378 i~~~~-~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+.. ..       ...++.+.|.+ +||.+.++..+     ..++++|++++  ++++++++++++|+++++++
T Consensus       326 ~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~--~~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          326 PSIAKTGR-------SSLDFCSELLDQHQVATVPGAAF-----GADDCIRLSYA--TDLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             CBCGGGTC-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCCC-------CHHHHHHHHHHhCCEEEeChhhh-----CCCCcEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence            55542 12       34578888886 69999886542     22578999986  69999999999999988764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=100.00  E-value=3.3e-32  Score=271.33  Aligned_cols=345  Identities=16%  Similarity=0.178  Sum_probs=255.4

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC--hHHHHHHHHHHHhhcCC---CcEEEecccHH
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT--NVVHLDLENDIASFMGL---EETALYSFGFS  151 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~---~~~i~~~sG~~  151 (457)
                      .+|+++++|.++.+ + ..++.+.+++.++++++...+......|+.  .+...++++.+++++|.   +.++++++|++
T Consensus        24 ~~g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~  101 (420)
T 1t3i_A           24 INGHPLVYLDNAAT-S-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATE  101 (420)
T ss_dssp             ETTEECEECBTTTC-C-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHH
T ss_pred             cCCCceEEecCCcc-C-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHH
Confidence            46888999988766 3 347899999999998754222111222333  46678999999999998   67888899999


Q ss_pred             HHHHHHHhh----cCCCCEEEEeCcccHHH----HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCcc
Q psy15447        152 TSASAIAAY----VKRNDAVFVDENINFAI----QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       152 a~~~ai~a~----~~~gd~v~~~~~~h~~~----~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      |+..++.++    .++||.|++..+.|.+.    .......|.++..++.     .|++++++.+++           ++
T Consensus       102 a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----------~~  170 (420)
T 1t3i_A          102 AINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSE-----------KT  170 (420)
T ss_dssp             HHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCCT-----------TE
T ss_pred             HHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhhCC-----------Cc
Confidence            999999999    89999999999988873    3445667888888775     478888887742           45


Q ss_pred             EEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEE
Q psy15447        219 KFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFC  297 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v  297 (457)
                      ++|++++++|++|.+.|+++|.++|++||+++|+||+|++|....   . ...+     ++|+++.|+||.+|+.| |++
T Consensus       171 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~-~~~~-----~~di~~~s~sK~~~~~g~G~~  241 (420)
T 1t3i_A          171 KLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPL---D-VQLI-----DCDWLVASGHKMCAPTGIGFL  241 (420)
T ss_dssp             EEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---C-HHHH-----TCSEEEEEGGGTTSCTTCEEE
T ss_pred             eEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccC---c-hhhc-----CCCEEEEehhhhcCCCceEEE
Confidence            788999999999999999999999999999999999998764321   1 1112     24899999999887655 899


Q ss_pred             EecHHHHHHHHhhCCcc------------------eecCCCcHHHHHHHHH-HHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447        298 VGSSYIIEHHRLSGSGY------------------CFSASLPPFLAVAANK-ALHLLKA--NPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       298 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~aaa~a-~l~~~~~--~~~~~~~l~~~~~~l~~~L  356 (457)
                      ++++++++.++....++                  .+..+.+++.++++++ +++.+.+  .+++.++++++.+++.+.|
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L  321 (420)
T 1t3i_A          242 YGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGL  321 (420)
T ss_dssp             EECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            99999888775432211                  1222234455555444 6777654  2457888999999999999


Q ss_pred             hcccccCCeEEeccC-----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEe
Q psy15447        357 SQHKVTQRFLVQGHR-----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITC  428 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~  428 (457)
                      ++   .+++++..+.     .++++.+.++. .       ...++.+.|.++||.+.++.++...   .....+++|+++
T Consensus       322 ~~---~~g~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~  390 (420)
T 1t3i_A          322 GQ---IPQLRLYGPNPKHGDRAALASFNVAG-L-------HASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASL  390 (420)
T ss_dssp             HT---CTTEEEESCCGGGSCBCSEEEEEETT-B-------CHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEEC
T ss_pred             Hh---CCCeEEeCCCccccccCCEEEEEECC-C-------CHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEec
Confidence            88   4588876543     37778777753 2       2456888898999999876433210   011157899999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      +..+|++|+++++++|+++++.++..
T Consensus       391 ~~~~~~~~i~~~~~~l~~~~~~~~~~  416 (420)
T 1t3i_A          391 YFYNTKEEIDLFLQSLQATIRFFSDD  416 (420)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHTC--
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            98899999999999999999887553

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=5.3e-32  Score=269.03  Aligned_cols=349  Identities=15%  Similarity=0.150  Sum_probs=250.9

Q ss_pred             CeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEeccc
Q psy15447         79 GIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYSFG  149 (457)
Q Consensus        79 G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sG  149 (457)
                      |+++|||+++.+ ....+++++.+++.+++++.+..    .. |+......++++.+++++    |    .+.++++++|
T Consensus        33 g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~----~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~  107 (407)
T 2zc0_A           33 GVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKS----VM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGG  107 (407)
T ss_dssp             SCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGG----GS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHH
T ss_pred             CCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccc----cc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCH
Confidence            678999987643 22224688999999999874311    11 222223456666666666    7    3466777788


Q ss_pred             HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEe
Q psy15447        150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVE  224 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e  224 (457)
                      ++|+..++++++++||.|++..++|..+...+...|.++..++.    .|++++++.++.....     ..++++| +++
T Consensus       108 t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~~~~  182 (407)
T 2zc0_A          108 TGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAK-----GQKVKLIYTIP  182 (407)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT-----TCCEEEEEECC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcc-----cCCceEEEECC
Confidence            99999999999999999999999999998889999988887765    3899999988731100     0234565 578


Q ss_pred             cCCCCCCCCCChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEe
Q psy15447        225 GVYMNSADICPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVG  299 (457)
Q Consensus       225 ~v~~~~G~i~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~  299 (457)
                      +++||+|.+.|.+   +|+++|++||+++|+||+|+.+.++.........++  +.+.+++++|+||++|+  .+|++++
T Consensus       183 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~G~r~G~~~~  260 (407)
T 2zc0_A          183 TGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD--NEGRVIVAGTLSKVLGTGFRIGWIIA  260 (407)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC--SSCCEEEEEESTTTTCTTSCCEEEEC
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC--CCCCEEEEcccccccCCCcceEEEec
Confidence            8999999999965   999999999999999999987655321111122222  23346889999999983  3599999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH----hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL----KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL  375 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~----~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  375 (457)
                      ++++++.+......+.++  .+++.++++.++++..    +..+..+++++++.+++.+.|++.  .+++.+..+..+.+
T Consensus       261 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~  336 (407)
T 2zc0_A          261 EGEILKKVLMQKQPIDFC--APAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENH--LPNAEFTKPIAGMF  336 (407)
T ss_dssp             CHHHHHHHHHHHTTTTSS--SCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHH--CTTSCBCCCSBSSE
T ss_pred             CHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEecCCCcEE
Confidence            999988887654444343  3777777777777643    223457788889999999999762  14555544455778


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++.++...       ...++.+.|.++ ||.+.++..+... ....+++|++++.. |++|+++++++|+++++++.
T Consensus       337 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~  405 (407)
T 2zc0_A          337 VMFFLPEGA-------DGISFANELMEREGVVVVPGKPFYTD-ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKF  405 (407)
T ss_dssp             EEEECSTTC-------CHHHHHHHHHHHTCEECBCSGGGCSS-SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred             EEEEcCCCC-------CHHHHHHHHHHhCCeEEECchhccCC-CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence            888886433       345789999998 9999887543210 01357899999876 89999999999999987764

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=1.3e-32  Score=272.85  Aligned_cols=355  Identities=11%  Similarity=0.054  Sum_probs=253.1

Q ss_pred             eeecCCCcEEEE-CCe-------eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh
Q psy15447         66 VVDQKSGYIVNI-NGI-------PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF  137 (457)
Q Consensus        66 ~i~~~~g~~~~~-~G~-------~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~  137 (457)
                      +..+++|+++|+ +|+       +++||+++. .++..+|++.+++.+++++....+.   .  +..++.+++++.+.+.
T Consensus         9 ~~~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~y~---~--~~~~l~~~la~~l~~~   82 (399)
T 1c7n_A            9 ISRKNLGSLKWDLMYSQNPEVGNEVVPLSVAD-MEFKNPPELIEGLKKYLDETVLGYT---G--PTEEYKKTVKKWMKDR   82 (399)
T ss_dssp             CCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSS-CSSCCCHHHHHHHHHHHHHCCCSSB---C--CCHHHHHHHHHHHHHH
T ss_pred             ccccCCCccccccchhhccccCCCceeeeecC-CCCCCCHHHHHHHHHHHhcCCCCCC---C--CcHHHHHHHHHHHHHH
Confidence            445799999994 764       789998765 4566689999999999975211111   1  1233334444444333


Q ss_pred             cC----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHh
Q psy15447        138 MG----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQ  205 (457)
Q Consensus       138 ~g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~  205 (457)
                      +|    .+.++++++|++|+..++.+++++||.|++..++|..+...+...|.++..++.        .|++++++.+++
T Consensus        83 ~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~  162 (399)
T 1c7n_A           83 HQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD  162 (399)
T ss_dssp             HCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC
T ss_pred             hCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc
Confidence            45    346778888899999999999999999999999999988888888988887764        478999988863


Q ss_pred             hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447        206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD  280 (457)
Q Consensus       206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D  280 (457)
                                .++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |........+.+  .+.+
T Consensus       163 ----------~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~  230 (399)
T 1c7n_A          163 ----------KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMP--GYEHTVFQSIDEQLADKT  230 (399)
T ss_dssp             ----------TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCT--TCCCCCGGGSCHHHHTTE
T ss_pred             ----------CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCcccHHHcCccccCcE
Confidence                      24567778899999999999   899999999999999999999865543  221112222221  1336


Q ss_pred             EEEecCcccccCcc---cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHH
Q psy15447        281 MIIGSLEHALGSVG---GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       281 i~~~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~  355 (457)
                      +++.|+||++|.+|   |+++++ +++++.++.....+.++ +.+++.++++.++++... ..++.+++++++.+++.+.
T Consensus       231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  309 (399)
T 1c7n_A          231 ITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGM-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDF  309 (399)
T ss_dssp             EEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccC-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence            88999999998555   899886 66888776543333222 358888888888876421 1234667788889999988


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT  433 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t  433 (457)
                      |++.  ++++.+..+..+.++++.++.. .       ...++.+.|+ ++||.+.++..+.   +...+++|++++.  +
T Consensus       310 L~~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~---~~~~~~iRis~~~--~  375 (399)
T 1c7n_A          310 FEVN--HPEIKAPLIEGTYLQWIDFRALKM-------DHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLAA--P  375 (399)
T ss_dssp             HHHH--CTTSBCCCCSBSSEEEEECGGGCC-------CHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECCS--C
T ss_pred             HHhh--CCCCeEecCCceEEEEEEcccCCC-------CHHHHHHHHHHhCCEEEeCccccC---CCCCCeEEEEecc--C
Confidence            8761  1466554334455557777641 2       2457888997 5799998865432   1235789999985  4


Q ss_pred             HHHHHHHHHHHHHHHHHhcC
Q psy15447        434 EQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~~~~~  453 (457)
                      +++++++++.|+++++++.+
T Consensus       376 ~~~l~~~l~~l~~~l~~~~~  395 (399)
T 1c7n_A          376 SSVIQESLERLNKALKDLKN  395 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999987754

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=1.2e-31  Score=264.98  Aligned_cols=352  Identities=12%  Similarity=0.032  Sum_probs=238.4

Q ss_pred             eeecCCCcEEE-ECCe-----eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChH-HHHHHHHHHHhhc
Q psy15447         66 VVDQKSGYIVN-INGI-----PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV-VHLDLENDIASFM  138 (457)
Q Consensus        66 ~i~~~~g~~~~-~~G~-----~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~-~~~~l~~~la~~~  138 (457)
                      +-.+++|+++| .+|+     ++|||.++.+ +++.+|++.+++.+++.+....+.   .  +..+ +.+++++.+.+.+
T Consensus         8 ~~~~~~~~~~~d~~~~~~~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~---~--~~~~~lr~~la~~l~~~~   81 (390)
T 1d2f_A            8 VDRHGTWCTQWDYVADRFGTADLLPFTISDM-DFATAPCIIEALNQRLMHGVFGYS---R--WKNDEFLAAIAHWFSTQH   81 (390)
T ss_dssp             ----------------------CEECCSSSC-SSCCCHHHHHHHHHHHTTCCCCCC---C--SCCHHHHHHHHHHHHHHS
T ss_pred             ccccCCCccchhhhccccCCCCeeEeeecCC-CCCCCHHHHHHHHHHHhCCCCCCC---C--CChHHHHHHHHHHHHHhc
Confidence            34578999999 4886     7899987654 566789999999999865211111   1  1233 4444444444444


Q ss_pred             C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhh
Q psy15447        139 G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQ  206 (457)
Q Consensus       139 g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~  206 (457)
                      |    .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.        .|++++++.+++ 
T Consensus        82 g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-  160 (390)
T 1d2f_A           82 YTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK-  160 (390)
T ss_dssp             CCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS-
T ss_pred             CCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhcc-
Confidence            5    346777788889999999999999999999999999998888889988887764        488999988853 


Q ss_pred             chhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEE
Q psy15447        207 DERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII  283 (457)
Q Consensus       207 ~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~  283 (457)
                               .++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |........+.++-.|. +
T Consensus       161 ---------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~d~-~  228 (390)
T 1d2f_A          161 ---------PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWG--EQPHIPWSNVARGDWAL-L  228 (390)
T ss_dssp             ---------TTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCS--SSCCCCGGGTCCSSEEE-E
T ss_pred             ---------CCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcCHHHcchhhHhh-c
Confidence                     24567777788999999988   789999999999999999999875543  22222233333221256 8


Q ss_pred             ecCcccccCcc---cEEEec-HHHHHHHHhhCC-cceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhh
Q psy15447        284 GSLEHALGSVG---GFCVGS-SYIIEHHRLSGS-GYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       284 ~s~sK~lg~~g---G~v~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~  357 (457)
                      .|+||++|.+|   |+++++ +++++.++.... .+.++ +.+++.++++.++++..++ .++.+++++++.+++.+.|+
T Consensus       229 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~  307 (390)
T 1d2f_A          229 TSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLS-SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMN  307 (390)
T ss_dssp             ECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCC-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcccC-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999998555   898874 788777765432 22332 3588888888888764222 23466778888899999887


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      +.  ++++.+..+..+.++++.++.. .       ...++.+.|. ++||.+.++..+.   ....+++|++++.  +++
T Consensus       308 ~~--~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~~Ris~~~--~~~  373 (390)
T 1d2f_A          308 AA--FPELNWQIPQSTYLAWLDLRPLNI-------DDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAGC--PRS  373 (390)
T ss_dssp             HH--CSSCCCCCCSBCSEEEEECGGGCC-------CHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECCS--CHH
T ss_pred             hh--CCCCEEecCCccEEEEEEccccCC-------CHHHHHHHHHHHcCEEeeCccccC---CCCCCeEEEEecC--CHH
Confidence            61  1466554334445567777642 2       2457889998 5799998875432   1235789999986  689


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy15447        436 DMNSLIETLCKSHDIA  451 (457)
Q Consensus       436 di~~~~~~l~~~~~~~  451 (457)
                      +++++++.|++++++.
T Consensus       374 ~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          374 KLEKGVAGLINAIRAV  389 (390)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999988764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=100.00  E-value=5.2e-32  Score=268.60  Aligned_cols=341  Identities=13%  Similarity=0.132  Sum_probs=249.8

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCC--CcccChHHHHHHHHHHHhhcCC---CcEEEecccHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPR--GFYGTNVVHLDLENDIASFMGL---EETALYSFGFST  152 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~--~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a  152 (457)
                      +|+.+++|..+.. + ..+|++.+++.+++++....+..+.  ..+...+...++++++++++|.   +.++++++|++|
T Consensus        20 ~g~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a   97 (406)
T 1kmj_A           20 NGLPLAYLDSAAS-A-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEG   97 (406)
T ss_dssp             TTEECEECCTTTC-C-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHH
T ss_pred             CCCceEEecCCcc-C-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHH
Confidence            5677777766544 3 2478999999999987532221111  1123467788999999999997   466777888899


Q ss_pred             HHHHHHhh----cCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        153 SASAIAAY----VKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       153 ~~~ai~a~----~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      +..++.++    +++||.|++..+.|.+...    .+...|.++..++.+     |++++++.+++           +++
T Consensus        98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~  166 (406)
T 1kmj_A           98 INLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDE-----------KTR  166 (406)
T ss_dssp             HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCT-----------TEE
T ss_pred             HHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhcc-----------CCe
Confidence            99999998    8999999999998765432    345668888887753     67888887742           457


Q ss_pred             EEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEE
Q psy15447        220 FIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCV  298 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~  298 (457)
                      +|++++++|++|.+.|+++|+++|++||+++|+||+|+.|...   ... ..+     ++|+++.|++|.+|+.| |+++
T Consensus       167 ~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~---~~~-~~~-----~~d~~~~s~~K~~g~~G~G~~~  237 (406)
T 1kmj_A          167 LLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHP---VDV-QAL-----DCDFYVFSGHKLYGPTGIGILY  237 (406)
T ss_dssp             EEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSC---CCH-HHH-----TCSEEEEEGGGTTSCTTCEEEE
T ss_pred             EEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCC---Ccc-ccc-----CCCEEEEEchhccCCCCcEEEE
Confidence            8999999999999999999999999999999999999875431   111 111     34899999999998777 9999


Q ss_pred             ecHHHHHHHHhhCCcc-------------------eecCCCcHHHHHHHH-HHHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447        299 GSSYIIEHHRLSGSGY-------------------CFSASLPPFLAVAAN-KALHLLKA--NPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~aaa~-a~l~~~~~--~~~~~~~l~~~~~~l~~~L  356 (457)
                      +++++++.++....+.                   .+..+.+++.+++++ ++++.+++  .+.+.++++++.+++.+.|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L  317 (406)
T 1kmj_A          238 VKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL  317 (406)
T ss_dssp             ECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence            9999888765332111                   122223444445444 77777653  2457788899999999999


Q ss_pred             hcccccCCeEEeccC-CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc---cCCCCCeEEEEecCCC
Q psy15447        357 SQHKVTQRFLVQGHR-DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE---AKKQKPSIRITCNISH  432 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~  432 (457)
                      ++   .+++++..+. .+.++.+.++..        ...++.+.|.++||.++++.++...   ....++++|++++..+
T Consensus       318 ~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~  386 (406)
T 1kmj_A          318 ES---VPDLTLYGPQNRLGVIAFNLGKH--------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN  386 (406)
T ss_dssp             TT---STTEEEESCTTCCSEEEEEETTC--------CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTC
T ss_pred             hc---CCCeEEecCCCcCCEEEEEECCC--------CHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCC
Confidence            88   4588876542 577777776532        2356888899999999876532110   0112579999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHh
Q psy15447        433 TEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~~  451 (457)
                      |++|+++++++|+++++.+
T Consensus       387 t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          387 THEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             CHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998765

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=4.8e-32  Score=265.93  Aligned_cols=329  Identities=15%  Similarity=0.133  Sum_probs=243.8

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEeccc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALYSFG  149 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~~sG  149 (457)
                      +|++++||.++.+ +++.+|.+.+++.+++++....   +....|.    .++++.+++++    |    .+.++++++|
T Consensus        27 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~~~----~~l~~~la~~~~~~~g~~~~~~~v~~~~g~   98 (370)
T 2z61_A           27 EGKKVIHLEIGEP-DFNTPKPIVDEGIKSLKEGKTH---YTDSRGI----LELREKISELYKDKYKADIIPDNIIITGGS   98 (370)
T ss_dssp             TTCCCEECCCCSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCC----HHHHHHHHHHHHHHSSCCCCGGGEEEESSH
T ss_pred             cCCCEEEccCCCC-CCCCCHHHHHHHHHHHHcCccC---CCCCCCC----HHHHHHHHHHHHHHhCCCCChhhEEECCCh
Confidence            3678999988765 4555789999999998762111   1111233    44555555554    2    3567888899


Q ss_pred             HHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        150 FSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ++|+..++++++++||.|++..+.|..+...++..|.++..++ .|++++++.+++           ++++|++++++||
T Consensus        99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~-~d~~~l~~~l~~-----------~~~~v~~~~p~np  166 (370)
T 2z61_A           99 SLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD-FTVESLEEALSD-----------KTKAIIINSPSNP  166 (370)
T ss_dssp             HHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC-SSHHHHHHHCCS-----------SEEEEEEESSCTT
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC-CCHHHHHHhccc-----------CceEEEEcCCCCC
Confidence            9999999999999999999999999999999999999999888 899999887743           3567788899999


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH  306 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~  306 (457)
                      +|.+.|++ |+++|++||+++|+||+|+.+.++.....+....+  ..+.|++++|+||++|.+|   |++++++++++.
T Consensus       167 tG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  243 (370)
T 2z61_A          167 LGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDE--NLEKTILINGFSKLYAMTGWRIGYVISNDEIIEA  243 (370)
T ss_dssp             TCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCT--TCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHH
T ss_pred             cCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccC--CCCcEEEEecChhccCCccceEEEEEECHHHHHH
Confidence            99999999 99999999999999999987655321111222111  1345899999999998555   999999999888


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHH-Hh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHL-LK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD  384 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~  384 (457)
                      ++.....+  +.+.+++.++++.++++. .+ ..++.+++++++.+++.+.|++    .|+.+..+..+.++++.++. .
T Consensus       244 ~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~-~  316 (370)
T 2z61_A          244 ILKLQQNL--FISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKD----FGWEVNNPIGAYYVFPNIGE-D  316 (370)
T ss_dssp             HHHHHHHH--TSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCBCCCCCBTTEECCBCSS-C
T ss_pred             HHHHHhhc--ccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH----cCCeecCCCcceEEEEecCC-C
Confidence            86543322  234588888888777764 22 2245678888999999999988    36666544445666666653 1


Q ss_pred             chHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                              ..++.++|. ++||.+.++..+..   ...+++|++++  ++++++++++++|+++++
T Consensus       317 --------~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          317 --------GREFAYKLLKEKFVALTPGIGFGS---KGKNYIRISYA--NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             --------HHHHHHHHHHHHCEECEEGGGGCG---GGSSBEEEECC--SCHHHHHHHHHHHHHHHC
T ss_pred             --------HHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence                    346888887 78999988654321   13578999998  699999999999998764

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=1.2e-31  Score=268.34  Aligned_cols=342  Identities=12%  Similarity=0.074  Sum_probs=251.4

Q ss_pred             CCeeeEEeecCCcc---CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-------CCcEEEec
Q psy15447         78 NGIPCINFATHNYL---SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-------LEETALYS  147 (457)
Q Consensus        78 ~G~~~id~~s~~~l---~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~~~i~~~  147 (457)
                      +|+++|||+.+.+.   .+..+|.+++++.+++.+....      .|+......++++.++++++       .+.+++++
T Consensus        52 ~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~  125 (427)
T 3dyd_A           52 PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN------GYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTS  125 (427)
T ss_dssp             TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS------SCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEES
T ss_pred             CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC------CCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEec
Confidence            57899999988754   2456799999999999873221      12223334678888888876       45678888


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +|++|+..++.+++++||.|++..+.|..+...+...|.++..++..       |++++++.+++           ++++
T Consensus       126 g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~  194 (427)
T 3dyd_A          126 GCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE-----------KTAC  194 (427)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT-----------TEEE
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc-----------CCCE
Confidence            99999999999999999999999999999888899999988877653       67777776642           3567


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      |++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |........+..+...++++|+||.+|..|   
T Consensus       195 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~--g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~ri  272 (427)
T 3dyd_A          195 LIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFS--DCKYEPLATLSTDVPILSCGGLAKRWLVPGWRL  272 (427)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCS--SCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCC
T ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccC--CCcCccHHHhCCCCcEEEEeeccccCCCcCcce
Confidence            788888999999999   999999999999999999999865443  222222222222222477899999987665   


Q ss_pred             cEEEec-------HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 GFCVGS-------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 G~v~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      |+++++       +++++.+......   ..+.+++.++++.++++..  +...+.+++++++.+++.+.|++   ++++
T Consensus       273 G~~~~~~~~~~~~~~i~~~l~~~~~~---~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~  346 (427)
T 3dyd_A          273 GWILIHDRRDIFGNEIRDGLVKLSQR---ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAA---IPGL  346 (427)
T ss_dssp             EEEEEECSTTSSHHHHHHHHHHHHHH---HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHH---STTE
T ss_pred             EEEEecCcchhhHHHHHHHHHHHHhc---cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc---CCCc
Confidence            898876       4677666543211   2345888888888887742  11245678888999999999988   4688


Q ss_pred             EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      .+..+..+.++++.+....-.  ......+++++|+ ++||++.++..+     ..++++||++.  ++++++++++++|
T Consensus       347 ~~~~p~~g~~~~~~l~~~~~~--~~~~~~~~~~~l~~~~gV~v~~g~~~-----~~~~~iRis~~--~~~e~i~~~l~~l  417 (427)
T 3dyd_A          347 RPVRPSGAMYLMVGIEMEHFP--EFENDVEFTERLVAEQSVHCLPATCF-----EYPNFIRVVIT--VPEVMMLEACSRI  417 (427)
T ss_dssp             EEECCSBTTEEEEEECGGGCT--TCSSHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEESC--SCHHHHHHHHHHH
T ss_pred             eecCCCeeEEEEEecCHhhcC--CCCCHHHHHHHHHHHCCEEEECCccc-----CCCCeEEEEEC--CCHHHHHHHHHHH
Confidence            876566678888777521000  0003456888886 789999887653     33689999976  7999999999999


Q ss_pred             HHHHHHhcC
Q psy15447        445 CKSHDIAVQ  453 (457)
Q Consensus       445 ~~~~~~~~~  453 (457)
                      ++++++..+
T Consensus       418 ~~~l~~~~~  426 (427)
T 3dyd_A          418 QEFCEQHYH  426 (427)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhhc
Confidence            999987754

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=1.4e-31  Score=262.00  Aligned_cols=320  Identities=10%  Similarity=0.073  Sum_probs=248.4

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~a  156 (457)
                      ++++|||+++.+ .++.+|++.+++.+++..+..    +     ..+...++++++++++|.  +.++++++|++++..+
T Consensus        31 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~----y-----~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~  100 (363)
T 3ffh_A           31 LTKITKLSSNEN-PLGTSKKVAAIQANSSVETEI----Y-----PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELL  100 (363)
T ss_dssp             CSCCEECSSCSC-TTCCCHHHHHHHHTCBSCCCB----C---------CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred             CCceEEccCCCC-CCCCCHHHHHHHHHHHHHhhc----C-----CCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHH
Confidence            468999998754 445679999998887653211    1     123457899999999985  4678888899999999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +++++++||.|++..+.|..+...+...|.++..++.+     |++++++.+.+           ++++|++++++|++|
T Consensus       101 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~p~nptG  169 (363)
T 3ffh_A          101 TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDE-----------KTTIVWICNPNNPTG  169 (363)
T ss_dssp             HHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCT-----------TEEEEEEESSCTTTC
T ss_pred             HHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCHHHHHHhccc-----------CCCEEEEeCCCCCcC
Confidence            99999999999999999999999999999999998877     89999888742           467888899999999


Q ss_pred             CCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447        232 DICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH  306 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~  306 (457)
                      .+.|++++.++|+.+  |+++|+||+|+.+..+. ........+.  .+.+++++|+||.+|..|   |++++++++++.
T Consensus       170 ~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  246 (363)
T 3ffh_A          170 NYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQ-PEKHEKLVRT--YKNLIITRTFSKIYGLASARVGYGIADKEIIRQ  246 (363)
T ss_dssp             CCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSC-CCCCGGGGGT--CTTEEEEEESSSTTCCSSCCCEEEEECHHHHHH
T ss_pred             CCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCcc-ccCHHHHhhc--CCCEEEEeechhhhcCchhceeeeecCHHHHHH
Confidence            999999999999888  99999999998554421 1122222222  233588999999998655   999999999998


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      ++.....    .+.+++.++++.++++..+..++.+++++++.+++.+.|++   ..++.+. ++.+.++++.++.+   
T Consensus       247 l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~-~~~~~~~~~~~~~~---  315 (363)
T 3ffh_A          247 LNIVRPP----FNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR---FEKVKLY-PANGNFVLIDLGIE---  315 (363)
T ss_dssp             HHHTCCS----CCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEC-CCCSSEEEEECSSC---
T ss_pred             HHHhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEC-CCCCeEEEEECCCC---
Confidence            8765432    34688888888888864332345678888899999999987   4677775 55677888877642   


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                            ..++.+.|.++||.++++..+     ..++++|++++   |++|+++++++|+++
T Consensus       316 ------~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~---~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          316 ------AGTIFSYLEKNGYITRSGAAL-----GFPTAVRITIG---KEEDNSAVIALLEKL  362 (363)
T ss_dssp             ------HHHHHHHHHHTTEECEETTTT-----TCTTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHCCeEEEeCccC-----CCCCeEEEECC---CHHHHHHHHHHHHHh
Confidence                  357889999999999887643     23689999986   999999999999875

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=6.5e-32  Score=271.65  Aligned_cols=349  Identities=15%  Similarity=0.132  Sum_probs=249.6

Q ss_pred             CeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC---CcEEEecccH
Q psy15447         79 GIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL---EETALYSFGF  150 (457)
Q Consensus        79 G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG~  150 (457)
                      +.++|||+++.+ ..+.+++++.+++.+++++.+.....    |+......+|++.+++++    |.   +.++++++|+
T Consensus        75 ~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~  150 (448)
T 3aow_A           75 TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQ----YGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQ  150 (448)
T ss_dssp             TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHS----CCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHH
T ss_pred             CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhC----CCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHH
Confidence            457899988654 22235688999999998763210001    112222355666666655    75   4667777888


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEec
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVEG  225 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e~  225 (457)
                      +|+..++++++++||.|++..+.|..+...++..|.+++.++.    .|+++|++.++.....     ..++++| ++++
T Consensus       151 ~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~-----~~~~k~v~~~~~  225 (448)
T 3aow_A          151 QALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQ-----GKKVKVVYTVPT  225 (448)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHT-----TCCEEEEEECCS
T ss_pred             HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHhhhhcc-----CCCCeEEEECCC
Confidence            9999999999999999999999999999999999998887765    3899999998721000     0245665 5678


Q ss_pred             CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEe
Q psy15447        226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG  299 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~  299 (457)
                      ++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.  ........+++.+.+++++||||++| +|   ||+++
T Consensus       226 ~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g--~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~  302 (448)
T 3aow_A          226 FQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVG  302 (448)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS--CCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEE
T ss_pred             CCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEe
Confidence            8999999988   5699999999999999999998766532  22212222333455789999999998 55   99999


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH---hhCcHHHHHHHHHHHHHHHHhhcccccC-CeEEeccCCCCe
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL---KANPSLLTKLREKCNTMHSLLSQHKVTQ-RFLVQGHRDTPL  375 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~  375 (457)
                      ++++++.+......+.+  +.+++.++++.++|+..   +..++++++++++.+++.+.|++.  .+ ++.+..+..+.+
T Consensus       303 ~~~l~~~l~~~~~~~~~--~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~g~~~~~p~~g~~  378 (448)
T 3aow_A          303 DPGIIRKMEIAKQSTDL--CTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEF--MPEGVKWTKPEGGMF  378 (448)
T ss_dssp             CHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCTTCEECCCSBSSE
T ss_pred             CHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCeEEeCCCccEE
Confidence            99999888654333333  34777777777777532   112345677778889999988762  13 677765556788


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +++.++...       ...++++.|.++||.+.++..+... ....+++|++++. .+++++++++++|++++++..
T Consensus       379 ~~v~~~~~~-------~~~~l~~~l~~~gV~v~pg~~f~~~-~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~~  446 (448)
T 3aow_A          379 IWVTLPDGI-------DSKKMLERAIKKGVAYVPGEAFYAH-RDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEEL  446 (448)
T ss_dssp             EEEECSTTC-------CHHHHHHHHHHTTEECEEGGGGSTT-CCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcCCCC-------CHHHHHHHHHHCCcEEEcchhhcCC-CCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHHH
Confidence            888886543       3457899999999999887543210 1235799999986 489999999999999987654

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=3.8e-32  Score=265.74  Aligned_cols=325  Identities=13%  Similarity=0.077  Sum_probs=246.5

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--CCcEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--LEETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~  155 (457)
                      +|+.+|||+++.+ .+..+|++.+++.+++.+.+....++.     .+...++++++++++|  .+.++++++|++|+..
T Consensus        24 ~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~-----~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~   97 (360)
T 3hdo_A           24 DIASWIKLNTNEN-PYPPSPEVVKAILEELGPDGAALRIYP-----SASSQKLREVAGELYGFDPSWIIMANGSDEVLNN   97 (360)
T ss_dssp             CCTTSEECSSCCC-SSCCCHHHHHHHHHHHTTTCGGGGSCC-----CSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHH
T ss_pred             cccceeeccCCCC-CCCCCHHHHHHHHHHHhcccchhhcCC-----CCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence            5788999998765 556789999999999876321111111     1123689999999998  4578888999999999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      ++.+++++||.|++..++|..+...+...|.++..++.++...++++++.          .+.+++++++++||+|.+.|
T Consensus        98 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~----------~~~~~v~i~~p~nptG~~~~  167 (360)
T 3hdo_A           98 LIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRIAGFPER----------YEGKVFFLTTPNAPLGPSFP  167 (360)
T ss_dssp             HHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSBTTCCSS----------BCSSEEEEESSCTTTCCCCC
T ss_pred             HHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCHHHHHhh----------cCCCEEEEeCCCCCCCCCcC
Confidence            99999999999999999999999999999999998887542222211111          12348888999999999999


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCC
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~  312 (457)
                      ++++.++|+++|+++|+||+|+.. .+.   +.....+.  .+.+++++|+||++|.+|   ||+++++++++.+.....
T Consensus       168 ~~~l~~l~~~~~~~li~De~~~~~-~~~---~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~  241 (360)
T 3hdo_A          168 LEYIDELARRCAGMLVLDETYAEF-AES---NALELVRR--HENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRD  241 (360)
T ss_dssp             HHHHHHHHHHBSSEEEEECTTGGG-SSC---CCTHHHHH--CSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHCCCEEEEECChHhh-CCc---chhHHhcc--CCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhCC
Confidence            999999999999999999999753 222   22111111  233688999999997655   999999999998876553


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      .    .+.+++.++++.++++..+..++.+++++++.+++.+.|++    .++.+. ++.+.++++.+...        .
T Consensus       242 ~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~-~~~~~~~~~~~~~~--------~  304 (360)
T 3hdo_A          242 H----YNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRS----IGYDVI-PSQGNYLFATPPDR--------D  304 (360)
T ss_dssp             S----CCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----TTCEEC-CCSSSEEEEECTTC--------C
T ss_pred             C----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEEc-CCCccEEEEECCCC--------C
Confidence            3    24688888888888875332345778889999999999988    377765 56677888776643        3


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..++.+.|.++||.+++...     +...+++|++++   |++|+++++++|+++.+
T Consensus       305 ~~~l~~~l~~~gi~v~~~~~-----~~~~~~iRis~~---~~~e~~~l~~al~~~~~  353 (360)
T 3hdo_A          305 GKRVYDGLYARKVLVRHFSD-----PLLAHGMRISIG---TREEMEQTLAALKEIGE  353 (360)
T ss_dssp             HHHHHHHHHHTTEECBCCCS-----TTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCEEEEECCC-----CCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence            45788999999999987653     233589999986   89999999999998764

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.4e-31  Score=264.31  Aligned_cols=338  Identities=12%  Similarity=0.136  Sum_probs=245.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCc-EEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEE-TALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~-~i~~~sG~~a~~  154 (457)
                      ++++||+++.. .++.+|++.+++.+++++....   +....|..+...++++.+.+.+|    .+. ++++++|++|+.
T Consensus        26 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~  101 (389)
T 1gd9_A           26 KDVISLGIGEP-DFDTPQHIKEYAKEALDKGLTH---YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFL  101 (389)
T ss_dssp             SSCEECCCCSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHH
T ss_pred             cCeEecCCCCC-CCCCCHHHHHHHHHHHhCCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHH
Confidence            36889987654 4456799999999999763211   11122344444444444444336    356 888889999999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|++..+.|.++...++..|.++..++.+       |++++++.+++           ++++|++++++
T Consensus       102 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~  170 (389)
T 1gd9_A          102 MGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTD-----------KTRALIINSPC  170 (389)
T ss_dssp             HHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCT-----------TEEEEEEESSC
T ss_pred             HHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCc-----------CceEEEEECCC
Confidence            9999999999999999999998888888889888877632       67888877742           34677888999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC-CCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST-GHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~-g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      ||+|.+.|   +++|+++|++||+++|+||+|+.+.++.. ...+....+.  .+.|++++|+||++|.+|   |+++++
T Consensus       171 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~  248 (389)
T 1gd9_A          171 NPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGM--FERTITVNGFSKTFAMTGWRLGFVAAP  248 (389)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTC--GGGEEEEEESTTTTTCGGGCCEEEECC
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCC--CCCEEEEecChhhcCCcccceEEEEEC
Confidence            99999986   88999999999999999999987665321 1222222121  346899999999998665   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++.+......+.+  +.+++.++++.++++....   .++++++++++.+++.+.|++    .|+++..+..+.+++
T Consensus       249 ~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~  322 (389)
T 1gd9_A          249 SWIIERMVKFQMYNAT--CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE----MGLPTVKPKGAFYIF  322 (389)
T ss_dssp             HHHHHHHHHHHTTTTC--SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCCCCCBTTEEC
T ss_pred             HHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH----cCCeecCCCeeeEEE
Confidence            9998888754433333  3477777777777764332   245677888999999999988    366665444455666


Q ss_pred             EEecC-CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        378 LYLQK-SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       378 i~~~~-~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.++. ..       ...++.+.|. ++||.+.++..+..   ...+++|++++.  +++++++++++|++++++.+
T Consensus       323 ~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRi~~~~--~~~~i~~~l~~l~~~~~~~~  387 (389)
T 1gd9_A          323 PRIRDTGL-------TSKKFSELMLKEARVAVVPGSAFGK---AGEGYVRISYAT--AYEKLEEAMDRMERVLKERK  387 (389)
T ss_dssp             CBCGGGTC-------CHHHHHHHHHHHTCEECEEGGGGCG---GGTTBEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccCCCC-------CHHHHHHHHHHhCCEEEeCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcc
Confidence            66653 22       3457889998 88999988754321   235789999874  89999999999999887643

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1.1e-31  Score=265.33  Aligned_cols=331  Identities=13%  Similarity=0.123  Sum_probs=241.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      .|++++||.++.+ .++.+|.+.+++.+++++....   +....|..++..++++.+.+..|.    +.++++++|++|+
T Consensus        39 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al  114 (389)
T 1o4s_A           39 KGEDVINLTAGEP-DFPTPEPVVEEAVRFLQKGEVK---YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQAL  114 (389)
T ss_dssp             TTCCCEECCCSSC-SSCCCHHHHHHHHHHHTTCCCC---CCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHH
T ss_pred             cCCCEEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHH
Confidence            4788999988765 4445789999999998763221   111123333444444444333353    4678888899999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..+.|..+...++..|.++..++.+       |++++++.+++           ++++|+++++
T Consensus       115 ~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p  183 (389)
T 1o4s_A          115 FNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVG-----------KTKAVLINSP  183 (389)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCT-----------TEEEEEEESS
T ss_pred             HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc-----------CceEEEEcCC
Confidence            99999999999999999999999888889999998887753       67777776642           4567888999


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +||+|.+.|   +++|+++|++||+++|+||+|+.+.++.....+....+.  .+.|++++|+||++|.+|   |+++++
T Consensus       184 ~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~l~~~  261 (389)
T 1o4s_A          184 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEG--FDRIVYINGFSKSHSMTGWRVGYLISS  261 (389)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSS--STTEEEEEESTTTTTCGGGCCEEEECC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCC--CCcEEEEeechhhcCCcccceEEEEeC
Confidence            999999988   899999999999999999999876553211122222111  245899999999998555   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +++++.+......+.  .+.+++.++++.++++..  .++++++++++.+++.+.|++    .|+++..+..+.++++.+
T Consensus       262 ~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~  333 (389)
T 1o4s_A          262 EKVATAVSKIQSHTT--SCINTVAQYAALKALEVD--NSYMVQTFKERKNFVVERLKK----MGVKFVEPEGAFYLFFKV  333 (389)
T ss_dssp             HHHHHHHHHHHHHHT--CSCCHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHH----TTCCCCCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHhhhcc--cCCCHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHh----cCCeeecCCcceEEEEeC
Confidence            998888765432222  234777777776665432  456788999999999999988    366665444456677776


Q ss_pred             cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +  .       ...++.+.|+ ++||.+.++..+     ..++++|++++.  +++++++++++|+++++
T Consensus       334 ~--~-------~~~~l~~~l~~~~gi~v~~g~~f-----~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          334 R--G-------DDVKFCERLLEEKKVALVPGSAF-----LKPGFVRLSFAT--SIERLTEALDRIEDFLN  387 (389)
T ss_dssp             S--S-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECCS--CHHHHHHHHHHHHHHHT
T ss_pred             C--C-------CHHHHHHHHHHHCCEEEeCchhc-----CCCCeEEEEEeC--CHHHHHHHHHHHHHHHh
Confidence            5  2       3457888887 789999877542     224699999983  99999999999988764

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=1.3e-31  Score=264.76  Aligned_cols=335  Identities=12%  Similarity=0.052  Sum_probs=240.5

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      +|+++|||+++.. .+..+|++.+++.+++.+....   +....|..++.+++++.+.+.+|    .+.++++++|++|+
T Consensus        29 ~g~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al  104 (391)
T 3h14_A           29 AGRRIIHMEVGQP-GTGAPRGAVEALAKSLETDALG---YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF  104 (391)
T ss_dssp             TTCCCEECCCSSC-SSCSCHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred             cCCCeEEccCCCC-CCCCCHHHHHHHHHHHhcCCCC---CCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHH
Confidence            6899999998753 4555789999999988752211   11122344444445555444433    35678888999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..++|..+...+...|.++..++.+       |++++++.              ++++|+++++
T Consensus       105 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--------------~~~~v~i~~p  170 (391)
T 3h14_A          105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--------------DLAGLMVASP  170 (391)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS--------------CCSEEEEESS
T ss_pred             HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc--------------CCeEEEECCC
Confidence            99999999999999999999999999999999999888764       56665543              2357788899


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +||+|.+.|   +++|+++|++||+++|+||+|+.+.++........   .  .+.+++++|+||++|..|   ||++++
T Consensus       171 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~--~~~~i~~~s~sK~~g~~G~r~G~~~~~  245 (391)
T 3h14_A          171 ANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE---L--TDECYVINSFSKYFSMTGWRVGWMVVP  245 (391)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG---T--CSSSEEEEESSSTTCCTTSCCEEEECC
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh---c--CCCEEEEEechhccCCccceeEEEEeC
Confidence            999999998   88999999999999999999986555432222222   2  233688999999998555   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYLY  379 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i~  379 (457)
                      +++++.+......+  +.+.+++.++++.++++..+..++.+++++++.+++.+.|++    .++.. ..+..+.++++.
T Consensus       246 ~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~~~~~~~~  319 (391)
T 3h14_A          246 EDQVRVVERIAQNM--FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPK----AGFTRIAPPDGAFYVYAD  319 (391)
T ss_dssp             GGGHHHHHHHHHHT--TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH----HTCCCBCCCCBTTEEEEE
T ss_pred             HHHHHHHHHHHhhh--ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCCcccCCCeeEEEEEe
Confidence            99988876543322  334578887777777762222245677888899999999987    23332 223445677777


Q ss_pred             ecC-CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        380 LQK-SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       380 ~~~-~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.. ..       ...++++.|+++ ||.+.++..+..  ....+++|++++.  +++++++++++|++++++..
T Consensus       320 ~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~--~~~~~~iRis~~~--~~~~i~~~l~~l~~~~~~~~  383 (391)
T 3h14_A          320 VSDLTD-------DSRAFAAEILEKAGVAVTPGLDFDP--ERGAGTLRFSYAR--ATADIEEGLDRLEAFMQARG  383 (391)
T ss_dssp             CTTTCS-------CHHHHHHHHHHHHCEECEEGGGTCT--TTGGGEEEEECCS--CHHHHHHHHHHHHHHHHHC-
T ss_pred             cCccCC-------CHHHHHHHHHHHCCEEEcCchhhCC--CCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence            764 22       345788888876 999988765422  1235799999986  89999999999999987654

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=2.7e-31  Score=265.85  Aligned_cols=347  Identities=13%  Similarity=0.088  Sum_probs=245.0

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC-cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE-ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~-~~i~~~sG~~a~~  154 (457)
                      .++|||.++.+ +++.+|.+.+++.+++++.......+....|..++.+++++.+.+.+|    .+ .++++++|++|+.
T Consensus        37 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~  115 (429)
T 1yiz_A           37 YKPLNLGQGFP-DYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALY  115 (429)
T ss_dssp             HCCEECCSSSC-SSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             CCEEEecCCCC-CCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHH
Confidence            46899988755 555689999999999976321111121123344555555555554446    34 6788888899999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      .++++++++||.|++..+.|..+...++..|.++..++.               .|++++++.++           ++++
T Consensus       116 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~  184 (429)
T 1yiz_A          116 ATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-----------EKTK  184 (429)
T ss_dssp             HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC-----------TTEE
T ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc-----------cCce
Confidence            999999999999999999988888888888988877653               46788887774           2457


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc-
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g-  294 (457)
                      +|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.  .+......+. ..+.|+++.|+||++|++| 
T Consensus       185 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~  262 (429)
T 1yiz_A          185 MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHIRICTLPGMWERTITIGSAGKTFSLTGW  262 (429)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--SCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred             EEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCcChhhccCCcCceEEEecchhccCCCCc
Confidence            8888899999999987   8899999999999999999998655432  2211112221 1356899999999998655 


Q ss_pred             --cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-----H--hh-CcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447        295 --GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-----L--KA-NPSLLTKLREKCNTMHSLLSQHKVTQR  364 (457)
Q Consensus       295 --G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-----~--~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~  364 (457)
                        |++++++++++.+........+  +.+++.++++.++++.     .  ++ .++.+++++++.+++.+.|++    .|
T Consensus       263 r~G~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g  336 (429)
T 1yiz_A          263 KIGWAYGPEALLKNLQMVHQNCVY--TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE----VG  336 (429)
T ss_dssp             CCEEEESCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred             ceEEEEeCHHHHHHHHHHHhhccc--CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHh----CC
Confidence              9999999998887654322223  3477888888888876     2  11 134667788889999999988    47


Q ss_pred             eEEeccCCCCeEEEEecCCcch-----HHHHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCHHH
Q psy15447        365 FLVQGHRDTPLKYLYLQKSDDE-----VASKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       365 ~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~ed  436 (457)
                      +.+..+..+.++++.+......     ........+++++|. ++||.+.++..+....  ....+++||+++  .++++
T Consensus       337 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~  414 (429)
T 1yiz_A          337 MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDEN  414 (429)
T ss_dssp             CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHH
T ss_pred             CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHH
Confidence            7776555577888887653000     000003457888887 6899998764321100  012579999998  48999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        437 MNSLIETLCKSH  448 (457)
Q Consensus       437 i~~~~~~l~~~~  448 (457)
                      |++++++|++++
T Consensus       415 i~~~l~~l~~~l  426 (429)
T 1yiz_A          415 LQKAAEILRKWK  426 (429)
T ss_dssp             HHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhc
Confidence            999999998865

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=2.5e-31  Score=266.75  Aligned_cols=335  Identities=11%  Similarity=-0.001  Sum_probs=249.8

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------CCcEEEeccc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------LEETALYSFG  149 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~sG  149 (457)
                      +|+++|||+++.+ .+..+|++.+++.+++.+...  .++....|.    .++++.++++++        .+.++++++|
T Consensus        42 ~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~----~~lr~~la~~~~~~~g~~~~~~~i~~t~g~  114 (437)
T 3g0t_A           42 TGTKFCRMEMGVP-GLPAPQIGIETEIQKLREGVA--SIYPNLDGL----PELKQEASRFAKLFVNIDIPARACVPTVGS  114 (437)
T ss_dssp             HTCCCEECCCCSC-CSCCCHHHHHHHHHHHHHTGG--GSCCCTTCC----HHHHHHHHHHHHHHHCCCCCGGGEEEESHH
T ss_pred             cCCCEEeccCcCC-CCCCCHHHHHHHHHHHhCCcC--cCCCCCCCh----HHHHHHHHHHHHHhhCCCCCcccEEEeCCH
Confidence            5789999998765 556789999999999985210  111111223    455556666554        4567888889


Q ss_pred             HHHHHHHHHhhc--CCCC--EEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        150 FSTSASAIAAYV--KRND--AVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       150 ~~a~~~ai~a~~--~~gd--~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      ++++..++.+++  ++||  .|++..+.|..+...+...|.++..++.+      |++++++.++.          .+++
T Consensus       115 t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~----------~~~~  184 (437)
T 3g0t_A          115 MQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKLREKLESYLQT----------GQFC  184 (437)
T ss_dssp             HHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTT----------TCCC
T ss_pred             HHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhc----------CCce
Confidence            999999999998  9999  99999999999999988889888888753      68888888843          2456


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-------ccccCCCCCCccEEEecCccc
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-------TEYFGVSTEEVDMIIGSLEHA  289 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-------~~~~~~~~~~~Di~~~s~sK~  289 (457)
                      +|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++. ....       ....+.  .+.+++++|+||+
T Consensus       185 ~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~  261 (437)
T 3g0t_A          185 SIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK-DYSHPGEPLYQPSVANY--TDNYILALSSSKA  261 (437)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS-CCCSTTSSCCCCCGGGT--CSCEEEEEESTTT
T ss_pred             EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC-CcCcccccchhhccCCC--CCcEEEEEcCccC
Confidence            7777777999999998   6788999999999999999998766542 1111       111111  2446899999999


Q ss_pred             ccCcc---cEEEecHHHHH-H-----------------HHhhCCcceecCCCcHHHHHHHHHHHHHHhh----CcHHHHH
Q psy15447        290 LGSVG---GFCVGSSYIIE-H-----------------HRLSGSGYCFSASLPPFLAVAANKALHLLKA----NPSLLTK  344 (457)
Q Consensus       290 lg~~g---G~v~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~----~~~~~~~  344 (457)
                      +|..|   ||+++++++++ .                 +.....  ..+.+.+++.++++.++++....    .++++++
T Consensus       262 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  339 (437)
T 3g0t_A          262 FSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALY--ALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE  339 (437)
T ss_dssp             TSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHH--HHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred             CCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHh--hhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHH
Confidence            98555   99999998887 6                 432221  12334588888888888877653    3467889


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEe------cc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQ------GH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~------~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                      ++++.+++.+.|++    .|+.+.      .+ ..+.++++.+. ..       ...++.+.|.++||.+.+...+..  
T Consensus       340 ~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~l~~~L~~~gi~v~~~~~~~~--  405 (437)
T 3g0t_A          340 YGRKARIMKKMFLD----NGFNIVYDKDGNEPLADGFYFTVGYK-GM-------DSSKLIEKFVRYGMCAITLKTTGS--  405 (437)
T ss_dssp             HHHHHHHHHHHHHT----TTEEESSCEETTEECCSSSEEEEEET-TC-------CHHHHHHHHHHTTEECEESTTTTC--
T ss_pred             HHHHHHHHHHHHHH----cCCEEeccccCCCCCceeEEEEEecC-CC-------CHHHHHHHHHHcCeEEeeccccCC--
Confidence            99999999999998    488776      34 66788888887 32       456799999999999988764321  


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                       ...+.+|++++. .|++|+++++++|++++++
T Consensus       406 -~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          406 -KRNEAMRICTSL-LPESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             -CCTTCEEEECSS-SCGGGHHHHHHHHHHHHHH
T ss_pred             -CCCCEEEEEEec-CCHHHHHHHHHHHHHHHhc
Confidence             123789999984 4999999999999988754

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=9.5e-32  Score=264.89  Aligned_cols=330  Identities=17%  Similarity=0.132  Sum_probs=245.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA  158 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~  158 (457)
                      .++||+++.+ .++.+|.+.+++.+++++ ...       |+......++++.++++++.+  .++++++|++|+..++.
T Consensus        26 ~~i~l~~~~~-~~~~~~~v~~a~~~~~~~-~~~-------y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~   96 (381)
T 1v2d_A           26 GAVNLGQGFP-SNPPPPFLLEAVRRALGR-QDQ-------YAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQ   96 (381)
T ss_dssp             TCEECCCCSC-SSCCCHHHHHHHHHHTTT-SCS-------CCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHH
T ss_pred             CeEEecCCCC-CCCCCHHHHHHHHHHHHH-hcC-------CCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence            4789988654 555689999999999875 211       122223578999999999864  67888889999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++.++||.|++..+.|..+...++..|.++..++.+        |++++++.++           +++++|++++++|++
T Consensus        97 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~~~npt  165 (381)
T 1v2d_A           97 SLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT-----------PRTRALLLNTPMNPT  165 (381)
T ss_dssp             HHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC-----------TTEEEEEEESSCTTT
T ss_pred             HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcC-----------cCCEEEEECCCCCCC
Confidence            999999999999999988888888899888877653        6888877663           245788888999999


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYII  304 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~  304 (457)
                      |.+.|   +++|+++|++||+++|+||+|+.+.+|..+..+...    ..+.|+++.|+||++|.+|   |+++++++++
T Consensus       166 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~----~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~  241 (381)
T 1v2d_A          166 GLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF----APERTFTVGSAGKRLEATGYRVGWIVGPKEFM  241 (381)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH----CTTTEEEEEEHHHHTTCGGGCCEEEECCTTTH
T ss_pred             CCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh----cCCCEEEEeechhhcCCcccceEEEEeCHHHH
Confidence            99987   889999999999999999999876555433333322    1345899999999997554   9999999888


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLL--KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +.++......  +.+.+++.++++.++++..  ++ .++++++++++.+++.+.|++    .|+.+..+..+.++++.++
T Consensus       242 ~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~  315 (381)
T 1v2d_A          242 PRLAGMRQWT--SFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA----MGLRVYVPEGTYFLMAELP  315 (381)
T ss_dssp             HHHHHHHHHH--TSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH----TTCCEECCSBSSEEEEECT
T ss_pred             HHHHHHHhhc--ccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH----CCCEecCCCcceEEEEecC
Confidence            8776433212  2234777777888888755  22 245778889999999999988    5777765545677777765


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      ..           ++.+.|.++||.+.++..+... +...+++|++++.  +++++++++++|++++++.+++
T Consensus       316 ~~-----------~~~~~l~~~gi~v~~g~~~~~~-~~~~~~iRi~~~~--~~~~i~~~~~~l~~~l~~~r~~  374 (381)
T 1v2d_A          316 GW-----------DAFRLVEEARVALIPASAFYLE-DPPKDLFRFAFCK--TEEELHLALERLGRVVNSPREA  374 (381)
T ss_dssp             TC-----------CHHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECCS--CHHHHHHHHHHHHHHC------
T ss_pred             hH-----------hHHHHHHhCCEEEecchHhCCC-CCCCCEEEEEeCC--CHHHHHHHHHHHHHHHhhcccc
Confidence            32           1556677889999876543210 1235799999986  9999999999999998877654

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=3.2e-31  Score=263.41  Aligned_cols=339  Identities=11%  Similarity=0.056  Sum_probs=244.7

Q ss_pred             CCeeeEEeecCCcc--CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHH
Q psy15447         78 NGIPCINFATHNYL--SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFS  151 (457)
Q Consensus        78 ~G~~~id~~s~~~l--~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~  151 (457)
                      +|++++||.++.+.  .+..+|++.+++.+++.+....   +....|..+...++++.+.+..|    .+.++++++|++
T Consensus        36 ~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~  112 (406)
T 1xi9_A           36 KGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNY---YGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTE  112 (406)
T ss_dssp             TTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHH
T ss_pred             cCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCC---CCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHH
Confidence            67899999987663  4556789999999998763211   11112333444444444444333    346788888999


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      |+..++.+++++||.|++..+.|.++...++..|.++..++.+       |++++++.+++           ++++|+++
T Consensus       113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~i~  181 (406)
T 1xi9_A          113 ALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD-----------RTKAIAVI  181 (406)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT-----------TEEEEEEE
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc-----------CceEEEEE
Confidence            9999999999999999999999999998889999888776642       78888887743           35677888


Q ss_pred             cCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc-cEEEecCcccccCcc---cEE
Q psy15447        225 GVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV-DMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       225 ~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~-Di~~~s~sK~lg~~g---G~v  297 (457)
                      +++|++|.+.|   +++|+++|++||+++|+||+|+.+.++.... ....++  + +. |++++|+||++|++|   |++
T Consensus       182 ~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~-~~~~~~--~-~~~~i~~~s~sK~~~~~G~r~G~~  257 (406)
T 1xi9_A          182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLT--K-DVPVIVMNGLSKVYFATGWRLGYM  257 (406)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHC--S-SSCEEEEEESTTTTCCGGGCCEEE
T ss_pred             CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC-CHHHcC--C-CceEEEEeccccccCCCccEEEEE
Confidence            99999999987   8999999999999999999998765532111 112222  2 34 789999999997554   888


Q ss_pred             E--ecH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc
Q psy15447        298 V--GSS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH  370 (457)
Q Consensus       298 ~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~  370 (457)
                      +  +++    ++++.+.......   .+.+++.++++.++++...+ .++++++++++.+++.+.|++   .+++.+..+
T Consensus       258 ~~~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~  331 (406)
T 1xi9_A          258 YFVDPENKLSEVREAIDRLARIR---LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE---IPGISTTKP  331 (406)
T ss_dssp             EEECTTCTTHHHHHHHHHHHHHT---CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCC
T ss_pred             EEecCchhHHHHHHHHHHHHHhh---cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh---CCCCeeecC
Confidence            8  888    8888876433211   23467777777777753211 234677888899999999988   457877544


Q ss_pred             CCCCeEEEEecC--CcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQK--SDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       371 ~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ..+.++++.++.  ..       ...++.+.|+ ++||.+.++..+..   ...+++||+++  ++++++++++++|+++
T Consensus       332 ~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~lRis~~--~~~~~i~~~~~~l~~~  399 (406)
T 1xi9_A          332 QGAFYIFPKIEVGPWK-------NDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL--PPIEILEEAMDRFEKF  399 (406)
T ss_dssp             CBSSEECCEECSCSCS-------SHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC--SCHHHHHHHHHHHHHH
T ss_pred             CeeEEEEEecCccCCC-------CHHHHHHHHHHhCCEEEeCchhcCC---CCCCEEEEEec--CCHHHHHHHHHHHHHH
Confidence            445556666653  22       3457888887 88999987754311   12578999997  8999999999999999


Q ss_pred             HHHhc
Q psy15447        448 HDIAV  452 (457)
Q Consensus       448 ~~~~~  452 (457)
                      ++++.
T Consensus       400 l~~~~  404 (406)
T 1xi9_A          400 MKERL  404 (406)
T ss_dssp             HHHC-
T ss_pred             HHHHh
Confidence            87653

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2.5e-31  Score=264.53  Aligned_cols=339  Identities=12%  Similarity=0.044  Sum_probs=242.6

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      +|++++||.++.+ +++.+|.+.+++ +++++....   +....|..++..++++.+.+..|    .+.++++++|++|+
T Consensus        41 ~g~~~i~l~~~~~-~~~~~~~v~~a~-~~l~~~~~~---y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~  115 (409)
T 2gb3_A           41 RGVRIHHLNIGQP-DLKTPEVFFERI-YENKPEVVY---YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI  115 (409)
T ss_dssp             TTCEEEECSSCCC-CSCCCTHHHHHH-HHTCCSSCC---CCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHH
T ss_pred             cCCCEEeccCCCC-CCCCCHHHHHHH-HHHhcCCCC---CCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHH
Confidence            5788999998766 555678999999 888642111   11112333444444444433333    25778888999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC------HHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++.+++++||.|++..+.|.++...++..|.++..++.++      +++|++.++           +++++|++++++
T Consensus       116 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~-----------~~~~~v~~~~p~  184 (409)
T 2gb3_A          116 LFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFIN-----------ERTKGIVLSNPC  184 (409)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCC-----------TTEEEEEEESSC
T ss_pred             HHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhC-----------cCCeEEEECCCC
Confidence            999999999999999999999999888999999998887653      445554442           245788888999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      |++|.+.|   +++|+++|++||+++|+||+|+.+.++......  ..++  .+.|++++|+||++|.+|   |++++++
T Consensus       185 nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~  260 (409)
T 2gb3_A          185 NPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA--LSIE--SDKVVVIDSVSKKFSACGARVGCLITRN  260 (409)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG--GGSC--CTTEEEEEESTTTTTCGGGCCEEEECSC
T ss_pred             CCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc--cccC--CCCEEEEecchhccCCccceEEEEEECc
Confidence            99999876   789999999999999999999876553211121  1222  245899999999998555   9999988


Q ss_pred             -HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEE-eccCCCCeEEE
Q psy15447        302 -YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLV-QGHRDTPLKYL  378 (457)
Q Consensus       302 -~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~i  378 (457)
                       ++++.++.....+.   +.+++.++++.++++... ..++++++++++.+++.+.|++    .|+.+ ..+..+.++++
T Consensus       261 ~~l~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~  333 (409)
T 2gb3_A          261 EELISHAMKLAQGRL---APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE----HGLKRFTKPSGAFYITA  333 (409)
T ss_dssp             HHHHHHHHHHHHHSC---CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCBCCCSBSSEEEE
T ss_pred             HHHHHHHHHHHhccC---CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH----cCceeeeCCCeeEEEEE
Confidence             88888765432222   457888887777774311 1234677888899999999988    36666 43444666777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHc------CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQA------GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~------Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+.. .       ...++.+.|.++      ||.+.++..+........+++|++++  ++++++++++++|+++++++.
T Consensus       334 ~~~~-~-------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~  403 (409)
T 2gb3_A          334 ELPV-E-------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC  403 (409)
T ss_dssp             ECSS-S-------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCC-C-------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence            7652 2       345788999987      99998765321100123579999988  799999999999999998775


Q ss_pred             C
Q psy15447        453 Q  453 (457)
Q Consensus       453 ~  453 (457)
                      +
T Consensus       404 ~  404 (409)
T 2gb3_A          404 S  404 (409)
T ss_dssp             C
T ss_pred             h
Confidence            4

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=100.00  E-value=7.3e-31  Score=258.65  Aligned_cols=315  Identities=13%  Similarity=0.133  Sum_probs=241.7

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--E-TALYSFGFSTSASAIAAYVKRNDAVFVDEN  172 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~  172 (457)
                      +|++.+++.+++..   ++ ++    ...+...++++.+++++|.+  . ++++++|++|+..++.+++++||.|++..+
T Consensus        32 ~~~v~~a~~~~~~~---~~-~~----~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~  103 (386)
T 2dr1_A           32 FPEVLEIMKVQMFS---HR-SK----EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII  103 (386)
T ss_dssp             CHHHHHHTTSCCCC---TT-SH----HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred             cHHHHHHHhccccc---cc-CH----HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence            56777766555431   11 01    12678899999999999976  4 567788899999999999999999999999


Q ss_pred             ccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447        173 INFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK  245 (457)
Q Consensus       173 ~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~  245 (457)
                      .|.+  +...+...|.+++.++.     .|++++++.+++.         +++++|++++++|++|.+.|+++|.++|++
T Consensus       104 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~  174 (386)
T 2dr1_A          104 GAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKN---------PDVEAVTITYNETSTGVLNPLPELAKVAKE  174 (386)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHC---------TTCCEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcC---------CCCcEEEEEeecCCcchhCCHHHHHHHHHH
Confidence            9887  67777888998888875     5899999998641         245788888999999999999999999999


Q ss_pred             cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEEEecHHHHHHHHhh-------------
Q psy15447        246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFCVGSSYIIEHHRLS-------------  310 (457)
Q Consensus       246 ~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~~~~~~~-------------  310 (457)
                      ||+++|+||+|++|...         .++...++|+++.|+||+++++ | |++++++++++.+...             
T Consensus       175 ~~~~li~D~a~~~~~~~---------~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (386)
T 2dr1_A          175 HDKLVFVDAVSAMGGAD---------IKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYV  245 (386)
T ss_dssp             TTCEEEEECTTTBTTBC---------CCTTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHH
T ss_pred             cCCeEEEEccccccCcc---------ccccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHH
Confidence            99999999999876542         1121224589999999999754 4 8999999888766310             


Q ss_pred             --CC-cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCeEEEEec
Q psy15447        311 --GS-GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPLKYLYLQ  381 (457)
Q Consensus       311 --~~-~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~~~i~~~  381 (457)
                        .. ......+.++..++++.++++.+.+.   ++++++++++++++.+.|++    .|+++..+.   .+.++++.++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~  321 (386)
T 2dr1_A          246 KYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE----IGLDILAEPGHESPTITAVLTP  321 (386)
T ss_dssp             HHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCTTCBCSSEEEEECC
T ss_pred             HhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----cCCeeCcCccccCCceEEEEcC
Confidence              00 01123356888888888888877543   46788999999999999998    366665332   3677888876


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ...       ...++.+.|.++||.+.++..+     ...+++|++++..+|++|+++++++|+++++++.
T Consensus       322 ~~~-------~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  380 (386)
T 2dr1_A          322 PGI-------KGDEVYEAMRKRGFELAKGYGS-----VKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK  380 (386)
T ss_dssp             TTC-------CHHHHHHHHHHTTEECEECCGG-----GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC-------CHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence            433       3567899999999999876532     2357999999988999999999999999988764

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=2e-31  Score=266.58  Aligned_cols=353  Identities=13%  Similarity=0.094  Sum_probs=248.9

Q ss_pred             CeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEec
Q psy15447         79 GIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYS  147 (457)
Q Consensus        79 G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~  147 (457)
                      ++++|||+++.+  .++ +++++.+++.+++++.+.....+....|.    .++++.+++++    |.     +.+++++
T Consensus        42 ~~~~idl~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~----~~lr~~la~~l~~~~g~~~~~~~~v~~t~  116 (425)
T 1vp4_A           42 DKDAISFGGGVPDPETF-PRKELAEIAKEIIEKEYHYTLQYSTTEGD----PVLKQQILKLLERMYGITGLDEDNLIFTV  116 (425)
T ss_dssp             STTCEECCCCSCCGGGS-CHHHHHHHHHHHHHHSHHHHTSCCCTTCC----HHHHHHHHHHHHHHHCCCSCCGGGEEEEE
T ss_pred             CCCceeCCCCCCCcccC-CHHHHHHHHHHHHhhcchhhcCCCCCCCC----HHHHHHHHHHHHhccCCCCCCcccEEEec
Confidence            467899987642  222 46889999999997632100111111233    45555555555    73     3567777


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-E
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-I  222 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i  222 (457)
                      +|++|+..++.+++++||.|++..+.|..+...+...|.++..++.    .|++++++.+++...+   ....++++| +
T Consensus       117 G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~---~~~~~~~~v~~  193 (425)
T 1vp4_A          117 GSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKN---GKIKQVKFIYV  193 (425)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT---TCGGGEEEEEE
T ss_pred             cHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhc---ccCCCceEEEE
Confidence            7889999999999999999999999999999999999988887765    3899999988752100   000145665 5


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      +++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.........++  +.+.+++++|+||++| +|   ||
T Consensus       194 ~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~~-~G~r~G~  270 (425)
T 1vp4_A          194 VSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG--GPERVVLLNTFSKVLA-PGLRIGM  270 (425)
T ss_dssp             ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH--CTTTEEEEEESTTTTC-GGGCEEE
T ss_pred             CCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC--CCCCEEEEeccccccc-cccceEE
Confidence            7889999999988   57899999999999999999987655322111111122  2344788999999998 55   99


Q ss_pred             EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH---hhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCC
Q psy15447        297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL---KANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRD  372 (457)
Q Consensus       297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~---~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~  372 (457)
                      +++++++++.+......+.+  +.+++.++++.++++..   +..++.+++++++.+++.+.|++. ...+++.+..+..
T Consensus       271 ~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~  348 (425)
T 1vp4_A          271 VAGSKEFIRKIVQAKQSADL--CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEG  348 (425)
T ss_dssp             EECCHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSB
T ss_pred             EeeCHHHHHHHHHHhhhhcC--CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCc
Confidence            99999998887654333333  34788888888888753   223456778888999999999872 1001677765566


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++++++.++...       ...++++.|.++||.+.++..+... ....+++||+++.. |++++++++++|+++++++.
T Consensus       349 g~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~  419 (425)
T 1vp4_A          349 GLFIWLTLPEGF-------DTWEMFEYAKRKKVFYVPGRVFKVY-DEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYG  419 (425)
T ss_dssp             SSEEEEECCTTC-------CTTTTHHHHHHHTEECEEGGGGCTT-CCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEEcCCCC-------CHHHHHHHHHHCCCEEECchhhcCC-CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHH
Confidence            788888886432       2346888999999999886543210 12357999999874 89999999999999988764


Q ss_pred             C
Q psy15447        453 Q  453 (457)
Q Consensus       453 ~  453 (457)
                      +
T Consensus       420 ~  420 (425)
T 1vp4_A          420 K  420 (425)
T ss_dssp             H
T ss_pred             h
Confidence            3

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=1.3e-31  Score=266.20  Aligned_cols=335  Identities=12%  Similarity=0.101  Sum_probs=241.2

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEecc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYSF  148 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~s  148 (457)
                      .|+++|||+++.+ .++.+|.+.+++.+++++....  ++....|.    .++++.+++++    |.     +.++++++
T Consensus        45 ~g~~~idl~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~----~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G  117 (404)
T 2o1b_A           45 GPLPLINMAVGIP-DGPTPQGIIDHFQKALTIPENQ--KYGAFHGK----EAFKQAIVDFYQRQYNVTLDKEDEVCILYG  117 (404)
T ss_dssp             CSSCCEECCCCSC-SSCCCHHHHHHHHHHTTCHHHH--SCCCTTCC----HHHHHHHHHHHHHHHCCCCCTTTSEEEESS
T ss_pred             CCCCEEecCCcCC-CCCCCHHHHHHHHHHHhCCCCC--CCCCCCCC----HHHHHHHHHHHHHHhCCCCCCcccEEEcCC
Confidence            4788999998765 4556799999999988541110  11111233    45555555555    75     35677777


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      |++|+..++++++++||.|++..+.|..+...+...|.++..++.      .|++++++.++.           ++++|+
T Consensus       118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~  186 (404)
T 2o1b_A          118 TKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIID-----------KTKLIY  186 (404)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH-----------HEEEEE
T ss_pred             cHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhcc-----------CceEEE
Confidence            789999999999999999999999988888888888988887764      367888887752           346777


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cE
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GF  296 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~  296 (457)
                      +++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.....+....+  ..+.|++++|+||++|.+|   ||
T Consensus       187 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~i~~~s~sK~~g~~G~r~G~  264 (404)
T 2o1b_A          187 LTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASEN--GKDVAIEIYSLSKGYNMSGFRVGF  264 (404)
T ss_dssp             ECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTT--HHHHEEEEEESTTTTTCGGGCCEE
T ss_pred             EcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCC--CCCCEEEEEecchhccCchhheEe
Confidence            7888999999987   78999999999999999999987654321111211111  1245789999999997555   99


Q ss_pred             EEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447        297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-KANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL  375 (457)
Q Consensus       297 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  375 (457)
                      +++++++++.++.....+.  .+.+++.++++.++++.. +..++.+++++++.+++.+.|++    .++.+..+..+.+
T Consensus       265 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~  338 (404)
T 2o1b_A          265 AVGNKDMIQALKKYQTHTN--AGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAK----ADLPFVHAKGGIY  338 (404)
T ss_dssp             EEECHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCEECCCBSSE
T ss_pred             EecCHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCeecCCCcceE
Confidence            9999999888865432222  345788888888887652 22245677888899999999988    3666654444556


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +++.++...       ...+++++|+ ++||.+.++..+..   ...+++||+++.  +++++++++++|++++++
T Consensus       339 ~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~--~~e~l~~~l~~l~~~l~~  402 (404)
T 2o1b_A          339 VWLETPPGY-------DSEQFEQFLVQEKSILVAPGKPFGE---NGNRYVRISLAL--DDQKLDEAAIRLTELAYL  402 (404)
T ss_dssp             EEEECCTTC-------CHHHHHHHHHHHHCEECEESGGGCG---GGTTEEEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred             EEEeCCCCC-------CHHHHHHHHHHHCCEEEeCchhhCc---CCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence            788876433       3457888887 57999988654321   135799999985  788999999999887654

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.5e-31  Score=260.91  Aligned_cols=340  Identities=12%  Similarity=0.097  Sum_probs=239.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC-----CcEEEecc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL-----EETALYSF  148 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~-----~~~i~~~s  148 (457)
                      +|+++|||+++.+ .++.+|.+.+++.+++++....  +    |+......++++.+++++    |.     +.++++++
T Consensus        35 ~g~~~idl~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g  107 (412)
T 2x5d_A           35 RGEDIIDLSMGNP-DGPTPPHIVEKLCTVAQREDTH--G----YSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG  107 (412)
T ss_dssp             TTCCCEECSSCCC-CSCCCHHHHHHHHHTC---------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred             cCCCEEecCCCCC-CCCCCHHHHHHHHHHHhCCCCC--C----CCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence            6889999988764 4556899999999988763211  1    111122345666666655    73     47788888


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC-------HHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN-------MQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d-------~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      |++|+..++.+++++||.|++..+.|..+...+...|.++..++.++       ++++++.+.           +++++|
T Consensus       108 ~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~-----------~~~~~v  176 (412)
T 2x5d_A          108 SKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESI-----------PKPRMM  176 (412)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEE-----------SCCSEE
T ss_pred             hHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcc-----------cCceEE
Confidence            99999999999999999999999999999888888899888887642       344444332           234677


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      ++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.+ |.....+....+.  .+.|++++|+||++|.+|   
T Consensus       177 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~  254 (412)
T 2x5d_A          177 ILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGA--KDIAVEFFTLSKSYNMAGWRI  254 (412)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTG--GGTEEEEEECC-CCSCTTSCC
T ss_pred             EECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCc--cCcEEEEecCccccCCcccce
Confidence            77788999999987   68999999999999999999987655 3222222222111  245799999999998555   


Q ss_pred             cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447        295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT  373 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~  373 (457)
                      ||+++++++++.+........  .+.+++.++++.++++..++ .++++++++++.+++.+.|++    .++.+..+..+
T Consensus       255 G~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g  328 (412)
T 2x5d_A          255 GFMVGNPELVSALARIKSYHD--YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLRE----AGWMVENPKAS  328 (412)
T ss_dssp             EEEEECHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHH----HTCCCCCCSBS
T ss_pred             EEEEcCHHHHHHHHHHHhhhc--cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEecCCCee
Confidence            999999999888765432222  34578888888777764321 235677888899999999988    36666533346


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++++.++.....    ....++++.|++ +||++.++..+..   ...+++|++++.  ++++++++++.|++++++..
T Consensus       329 ~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~---~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~  399 (412)
T 2x5d_A          329 MYVWAKIPEPYAH----LGSLEFAKKLLQDAKVSVSPGIGFGD---YGDDHVRFALIE--NRDRLRQAVRGIKAMFRADG  399 (412)
T ss_dssp             SEEEEECCTTTGG----GCHHHHHHHHHHHHCEECEEGGGGCG---GGTTEEEEECCS--CHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEcCCccCC----CCHHHHHHHHHHHCCEEEeCchhhCC---CCCCeEEEEecC--CHHHHHHHHHHHHHHHHhcC
Confidence            6778877532100    013568888875 6999988764321   235799999986  89999999999999988764

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=100.00  E-value=2.6e-32  Score=266.43  Aligned_cols=335  Identities=13%  Similarity=0.060  Sum_probs=244.0

Q ss_pred             eeeEE-eecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHH
Q psy15447         80 IPCIN-FATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id-~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~  158 (457)
                      |+++| |.+++|+++++||.+.+++.+++++++.  ...+..|+..+...+|++++++++|.+..+++++|++|+..+++
T Consensus         3 ~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~~--~~~~~~y~~~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~   80 (357)
T 3lws_A            3 NRLRTSFQQTTGQISGHGKRNVGVLKTAFAAVAD--EMASDQYGTGAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALR   80 (357)
T ss_dssp             CHHHHHHHTCSEESSBSSCCBHHHHHHHHTTSCT--TCBCEETTEETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred             chhhhHHHhhcccccCCCCCCHHHHHHHHHHhhc--ccCcccccCChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHH
Confidence            56677 7889999999999999999999887652  23345677778889999999999999988999999999999999


Q ss_pred             hhcCCCC--EEEEeCcccHHHHH---HHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        159 AYVKRND--AVFVDENINFAIQT---GLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       159 a~~~~gd--~v~~~~~~h~~~~~---~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      +++.+||  .|+++..+|.....   .....|.++..++..    |++++++..            + +++|++++++||
T Consensus        81 ~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~------------~-~~~v~~~~p~np  147 (357)
T 3lws_A           81 IWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGAADRLMTLDEIKALP------------D-IACLLLELPQRE  147 (357)
T ss_dssp             HHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSCTTSCCCHHHHHTCC------------S-CSEEEEESSBGG
T ss_pred             HHhhcCCCcEEEecccceeeeeccchhhhccCcEEEEecCCCCCcCHHHHhcCc------------C-cceEEEEccccc
Confidence            9988888  88888888877554   345668888877643    677776541            2 568899999998


Q ss_pred             C-CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHHHH
Q psy15447        230 S-ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYII  304 (457)
Q Consensus       230 ~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~  304 (457)
                      + |.+.|   +++|+++|++||++||+||+|.++..+..+.......    ...|+++.|+||++ |+.||+++++++++
T Consensus       148 ~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~~~d~~~~s~sK~~~~~~gg~~~~~~~~~  223 (357)
T 3lws_A          148 IGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA----GLFDSIYISFYKGLGGIAGAILAGPAAFC  223 (357)
T ss_dssp             GTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH----TTSSEEEEESSSTTCCSSCEEEEECHHHH
T ss_pred             CCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH----hcCCEEEEeccccCCCCceEEEEcCHHHH
Confidence            7 88886   8899999999999999999987433222122221111    23467789999999 66789999999988


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecCC
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQKS  383 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~  383 (457)
                      +.++.....+..+.......++++.++++...+   ..++..++.+++.+.|++   ++++++. .++.++++++.++..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~  297 (357)
T 3lws_A          224 QTARIWKRRYGGDLISLYPYIVSADYYYELRKD---RMGQYYEQAKQLAEQFNA---LPGVHTTPEVPVSNMFHLHFDGQ  297 (357)
T ss_dssp             HHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHHHHT---STTEEEESSSCSSSEEEEEEESC
T ss_pred             HHHHHHHHHhcCCcccchHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHh---CCCCeeccCCCcceEEEEEecCC
Confidence            887542211111111233344555566654322   345567888999999988   5688873 456788888888764


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC---CCHHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS---HTEQDMNSLIETLCKSH  448 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~---~t~edi~~~~~~l~~~~  448 (457)
                      ..     ....++.+.|.++||.++++..+    .++..++|+++...   .++++++++++.|.+++
T Consensus       298 ~~-----~~~~~~~~~l~~~Gi~v~~g~~~----~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          298 AA-----DISPKLEQVQEETGLGFVGYLVD----KDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             HH-----HHHHHHHHHHHHHCEESCSCCEE----CSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             hH-----HHHHHHHHHHHhcCeEEeccccc----CCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            20     13567888999999999887542    12335899988643   68899999999887754

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=3.9e-31  Score=258.90  Aligned_cols=321  Identities=12%  Similarity=0.079  Sum_probs=245.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSASA  156 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~a  156 (457)
                      ++++|||+++.. .++.+|++.+++.+++.... .+.       .. ...++++++++++|.  +.++++++|++++..+
T Consensus        29 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~-~y~-------~~-~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~   98 (365)
T 3get_A           29 VKEVIKLASNEN-PFGTPPKAIECLRQNANKAH-LYP-------DD-SMIELKSTLAQKYKVQNENIIIGAGSDQVIEFA   98 (365)
T ss_dssp             CSCCEECSSCCC-TTCSCHHHHHHHHHHGGGTT-SCC-------CT-TCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHH
T ss_pred             CCceEEecCCCC-CCCCCHHHHHHHHHHHHhhc-cCC-------CC-ChHHHHHHHHHHhCCCcceEEECCCHHHHHHHH
Confidence            378999998743 24468999999999987521 111       11 126899999999984  4778888999999999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +.+++++||.|++..++|..+...++..|.++..++.     .|++++++.++           +++++|++++++||+|
T Consensus        99 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~p~nptG  167 (365)
T 3get_A           99 IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNLDEFKKLYETHK-----------DEIKLIFLCLPNNPLG  167 (365)
T ss_dssp             HHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTT-----------TTEEEEEEESSCTTTC
T ss_pred             HHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhC-----------CCCCEEEEcCCCCCCC
Confidence            9999999999999999999999999999999998886     35566666654           3467888889999999


Q ss_pred             CCCChHHHHHHHH--HcCcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHH
Q psy15447        232 DICPLKDILSLRS--KYQARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYI  303 (457)
Q Consensus       232 ~i~~l~~i~~l~~--~~g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~  303 (457)
                      .+.|.+++.++++  ++|+++|+||+|+.+.+   +..........+.  .+.+++++|+||++|..|   |++++++++
T Consensus       168 ~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~  245 (365)
T 3get_A          168 ECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE--FDNVLYLGTFSKLYGLGGLRIGYGIANANI  245 (365)
T ss_dssp             CCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH--CTTEEEEEESSSTTSCTTTCCEEEEECHHH
T ss_pred             CCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhcc--CCCEEEEeecchHhcCcchheEEEEcCHHH
Confidence            9999988888888  77999999999986552   2111122222111  234688999999997555   999999999


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      ++.++.....+    +.+++.++++.++++..+..++.+++++++.+++.+.|++    .++.+. ++.+.++++.++..
T Consensus       246 ~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~-~~~~~~~~~~~~~~  316 (365)
T 3get_A          246 ISAFYKLRAPF----NVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKK----HNIKII-DSYTNFITYFFDEK  316 (365)
T ss_dssp             HHHHHHHSCTT----CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTCEEC-CCSSSEEEEECSSS
T ss_pred             HHHHHHhcCCC----CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEC-CCCCeEEEEECCCC
Confidence            99887655432    3688888888888764333345778888999999999988    477765 55677788877653


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                              ...++.+.|.++||.+.++..+     . .+++|++++   |++|+++++++|++++
T Consensus       317 --------~~~~~~~~l~~~gi~v~~g~~~-----~-~~~iRis~~---~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          317 --------NSTDLSEKLLKKGIIIRNLKSY-----G-LNAIRITIG---TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             --------CHHHHHHHHHTTTEECEECGGG-----T-CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred             --------CHHHHHHHHHHCCEEEEECccC-----C-CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence                    2357889999999999887643     2 589999986   8999999999999875

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=3.5e-30  Score=252.61  Aligned_cols=317  Identities=12%  Similarity=0.118  Sum_probs=240.0

Q ss_pred             EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh------cCC--CcEEEecccHHHHH
Q psy15447         83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF------MGL--EETALYSFGFSTSA  154 (457)
Q Consensus        83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~------~g~--~~~i~~~sG~~a~~  154 (457)
                      |||+++.+ .++.+|++.+++.+++++.+.....    |+... ..++++.++++      ++.  +.++++++|++++.
T Consensus        33 idl~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~----y~~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           33 IRLNTNEN-PYPPSEALVADLVATVDKIATELNR----YPERD-AVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             EECSSCCC-CSCCCHHHHHHHHHHHHHHGGGTTS----CCCTT-CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             eeccCCCC-CCCCCHHHHHHHHHHHHhccccccc----CCCcc-HHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            89998866 5567899999999999874211111    11111 24677777776      342  35566667778999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      .++++++++||.|++..+.|..+...+...|.++..++.+     |++++++.+++.          ++++|++++++||
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~np  176 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK----------QPDIVFVTTPNNP  176 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHH----------CCSEEEEESSCTT
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhcc----------CCCEEEEeCCCCC
Confidence            9999999999999999999999988889999998887743     688998888641          3467778999999


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC-ccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE-VDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~-~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      +|.+.|++++.++|+.+++++|+||+|+.+..+   .......+.  .+ .+++++|+||++|.+|   |++++++++++
T Consensus       177 tG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~---~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~  251 (369)
T 3cq5_A          177 TGDVTSLDDVERIINVAPGIVIVDEAYAEFSPS---PSATTLLEK--YPTKLVVSRTMSKAFDFAGGRLGYFVANPAFID  251 (369)
T ss_dssp             TCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCS---CCGGGGTTT--CTTTEEEEEESSSTTSCGGGCCEEEEECTHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCEEEEECCchhhcCC---cchHHHHhh--CCCCEEEEEechHhcCCcccceEEEEeCHHHHH
Confidence            999999999999999999999999999866532   111121111  12 4688999999998656   99999999988


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .+......+    +.+++.++++.++++..+..++.+++++++.+++.+.|++    .|+.+. ++.++++++.++.   
T Consensus       252 ~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~---  319 (369)
T 3cq5_A          252 AVMLVRLPY----HLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE----LGYAVV-PSESNFVFFGDFS---  319 (369)
T ss_dssp             HHHTTSCTT----CSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH----HTCEEE-CCSSSEEEEECCS---
T ss_pred             HHHHcCCCC----CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEEC-CCCCeEEEEECCC---
Confidence            887544332    3588888888888875332345678888999999999988    577775 5567888887752   


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                            ...++.+.|.++||.+.++..        ++++|++++   +++|+++++++|+++++
T Consensus       320 ------~~~~l~~~l~~~gi~v~~~~~--------~~~iRis~~---~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          320 ------DQHAAWQAFLDRGVLIRDVGI--------AGHLRTTIG---VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             ------SHHHHHHHHHHTTEECBCCSC--------TTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred             ------CHHHHHHHHHHCCEEEEECCC--------CCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence                  345788899999999987521        478999997   89999999999998763

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=100.00  E-value=1e-30  Score=257.31  Aligned_cols=338  Identities=14%  Similarity=0.097  Sum_probs=242.7

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      .|+|++++.    ..+|++.+++.+++.+ |+.....+...++..+...++++.+++++|.+  .++++++|++|+..++
T Consensus         3 ~yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~   78 (384)
T 1eg5_A            3 VYFDNNATT----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWIL   78 (384)
T ss_dssp             EECBTTTCC----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHH
T ss_pred             EEEecCccC----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHH
Confidence            356666542    3479999999999986 22211112122344667789999999999965  6788888999999999


Q ss_pred             Hhhc----CCCCEEEEeCcccHHHHHHH---HhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        158 AAYV----KRNDAVFVDENINFAIQTGL---IASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       158 ~a~~----~~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      .++.    ++||.|++..+.|.+....+   ...|.++..++.     .|++++++.+++           ++++|++++
T Consensus        79 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~  147 (384)
T 1eg5_A           79 KTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-----------DTFLVSIMA  147 (384)
T ss_dssp             HHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-----------TEEEEEEES
T ss_pred             HhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-----------CCeEEEEEC
Confidence            9987    79999999999998876655   677888888875     378888887742           457888899


Q ss_pred             CCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447        226 VYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY  302 (457)
Q Consensus       226 v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~  302 (457)
                      ++|++|.+.|+++|.++|++||  +++|+||+|++|...         .++...+.|+++.|++|.+|+.| |+++++++
T Consensus       148 ~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~  218 (384)
T 1eg5_A          148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIP---------FSLEKLEVDYASFSAHKFHGPKGVGITYIRKG  218 (384)
T ss_dssp             BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSC---------CCCTTTCCSEEEEEGGGGTSCTTCEEEEECTT
T ss_pred             CCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcc---------cCchhcCCCEEEecHHHhcCCCceEEEEEcCC
Confidence            9999999999999999999999  999999999865321         11211245899999999998766 99998886


Q ss_pred             H--HHHHHhhCC-cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC---CCCe
Q psy15447        303 I--IEHHRLSGS-GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPL  375 (457)
Q Consensus       303 ~--~~~~~~~~~-~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~---~~~~  375 (457)
                      +  ...+..... ......+.++..++++.++++...+. ++.+++++++.+++.+.|++    .++++..+.   .+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~  294 (384)
T 1eg5_A          219 VPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN----LGAHIITPLEISLPNT  294 (384)
T ss_dssp             SCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT----TTCEECSCTTSBCTTE
T ss_pred             CccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC----CCeEEeCCcccCCCCE
Confidence            5  211111000 00123356788888888888775433 56788899999999999988    677775432   2356


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc----------C----CCCCeEEEEecCCCCHHHHHHHH
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA----------K----KQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~----~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      +.+.+...        ...++.+.|.++||.+.++..+....          .    ...+++||+++..+|++|+++++
T Consensus       295 ~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~  366 (384)
T 1eg5_A          295 LSVSFPNI--------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFL  366 (384)
T ss_dssp             EEEECTTC--------CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHH
T ss_pred             EEEEeCCC--------CHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHH
Confidence            66766532        24578889999999998754321100          0    01368999999889999999999


Q ss_pred             HHHHHHHHHhcCC
Q psy15447        442 ETLCKSHDIAVQP  454 (457)
Q Consensus       442 ~~l~~~~~~~~~~  454 (457)
                      ++|++++++++..
T Consensus       367 ~~l~~~~~~~~~~  379 (384)
T 1eg5_A          367 KKIEEILSFLDLT  379 (384)
T ss_dssp             HHHHHHHHHC---
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887653

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=4.2e-31  Score=265.04  Aligned_cols=308  Identities=12%  Similarity=0.048  Sum_probs=224.4

Q ss_pred             HHHHHHHHHhhcC----------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecCC-
Q psy15447        127 HLDLENDIASFMG----------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKHN-  194 (457)
Q Consensus       127 ~~~l~~~la~~~g----------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~~-  194 (457)
                      ..+|+++++++++          .+.++++++|++|+..++.+++++||.|+++.++|.++..++. ..|.+++.++++ 
T Consensus        88 ~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~  167 (435)
T 3piu_A           88 LPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTS  167 (435)
T ss_dssp             CHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCG
T ss_pred             cHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCC
Confidence            4677778877776          5678889999999999999999999999999999999888887 789999888764 


Q ss_pred             ------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC
Q psy15447        195 ------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       195 ------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g  265 (457)
                            |++++++.+++....     ..++++|++++++||+|.+.|   +++|+++|++||++||+||+|+.+.++...
T Consensus       168 ~~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~  242 (435)
T 3piu_A          168 SNGFQITETALEEAYQEAEKR-----NLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPS  242 (435)
T ss_dssp             GGTSCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSC
T ss_pred             ccCCcCCHHHHHHHHHHHHhc-----CCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence                  799999999764321     135678889999999999988   578889999999999999999876554322


Q ss_pred             CccccccC----CC-----CCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        266 HGVTEYFG----VS-----TEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       266 ~~~~~~~~----~~-----~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      ........    ++     + +.+++++|+||++|..|   |++++ ++.+.+.++.....  +  ..+++.++++.+.+
T Consensus       243 ~~~~~~~~~~~~~d~~~~~~-~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~l  317 (435)
T 3piu_A          243 FISVMEVLKDRNCDENSEVW-QRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSF--G--LVSSQTQHLLSAML  317 (435)
T ss_dssp             CCCHHHHHHC-------CGG-GGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGG--S--CCCHHHHHHHHHHH
T ss_pred             CcCHHHhccccccccccCCC-CCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhc--C--CCCHHHHHHHHHHh
Confidence            22111111    11     2 23488999999998655   99888 56777766543321  2  23566656555555


Q ss_pred             HHH---hh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeE
Q psy15447        333 HLL---KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAI  407 (457)
Q Consensus       333 ~~~---~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v  407 (457)
                      +..   ++ .++.+++++++.+++.+.|++    .|+.+..+..+.++++.++..... .......+++++|+++ ||++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~l~~~~gi~v  392 (435)
T 3piu_A          318 SDKKLTKNYIAENHKRLKQRQKKLVSGLQK----SGISCLNGNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYEVHLNI  392 (435)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TTCEECCCCSSSEEEEECGGGSSS-SSHHHHHHHHHHHHHTSCEEC
T ss_pred             cChHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCcccCCCeeEEEEEEccccccc-CCchhHHHHHHHHHHHCCEEE
Confidence            422   21 134677888999999999988    578776555568888888653110 0011345788888887 9999


Q ss_pred             eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .++..+.   +..++++||+++.. |++++++++++|+++++++.+
T Consensus       393 ~~g~~~~---~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~~  434 (435)
T 3piu_A          393 SPGSSCH---CTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYYN  434 (435)
T ss_dssp             EEGGGGT---CSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC-
T ss_pred             eCCcccC---CCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHhC
Confidence            8865432   23467999999654 999999999999999987653

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-30  Score=254.99  Aligned_cols=334  Identities=11%  Similarity=0.088  Sum_probs=240.1

Q ss_pred             eeecCCCcEEE--ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--C
Q psy15447         66 VVDQKSGYIVN--INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--E  141 (457)
Q Consensus        66 ~i~~~~g~~~~--~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~  141 (457)
                      .+..+.+.+.+  .+|+++|||+++.. .++.+|++.+++.+++++... +        ..+...+++++++++++.  +
T Consensus        10 ~~~~g~~~~~~~~~~~~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~~-y--------~~~~~~~l~~~la~~~~~~~~   79 (361)
T 3ftb_A           10 LMIHGGDIYTEGVFKGRELLDYSSNIN-PLGIPKSFLNNIDEGIKNLGV-Y--------PDVNYRRLNKSIENYLKLKDI   79 (361)
T ss_dssp             ------------------CEETTCCCC-TTCSCHHHHTTHHHHHHGGGS-C--------CCTTCHHHHHHHHHHHTCCSC
T ss_pred             cccCCCCHHHHhhcCCCCEEEecCCCC-CCCCCHHHHHHHHHHHHHhcC-C--------CCccHHHHHHHHHHHhCCCcc
Confidence            34444444433  38999999998743 233579999999999986321 1        112347899999999984  4


Q ss_pred             cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCC
Q psy15447        142 ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKV  216 (457)
Q Consensus       142 ~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~  216 (457)
                      .++++++|++|+..++.++    |.|++..++|..+...+...|.++..++.+     +++++++.+++           
T Consensus        80 ~i~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-----------  144 (361)
T 3ftb_A           80 GIVLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-----------  144 (361)
T ss_dssp             EEEEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-----------
T ss_pred             eEEEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-----------
Confidence            6677788889999999887    889999999999988999999998887743     56777777642           


Q ss_pred             ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc
Q psy15447        217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                       ++++++++++||+|.+.|   +++|+++|++||+++|+||+|+.+..+ .+.......+..  +.++++.|+||.+|..
T Consensus       145 -~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~--~~~i~~~s~sK~~~~~  220 (361)
T 3ftb_A          145 -VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNY--SCLFIIRAMTKFFAMP  220 (361)
T ss_dssp             -CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTC--SSEEEEEESSSTTSCG
T ss_pred             -CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccC--CCEEEEeeChhhcCCC
Confidence             467788888999999988   667888888999999999999876554 223333333322  2358889999999755


Q ss_pred             c---cEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeE-Ee
Q psy15447        294 G---GFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFL-VQ  368 (457)
Q Consensus       294 g---G~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~-~~  368 (457)
                      |   |+++ +++++++.++.....    .+.+++.++++.++++..+..++.+++++++.+++.+.|++   .+++. +.
T Consensus       221 G~r~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~  293 (361)
T 3ftb_A          221 GIRFGYGITNNKEIAAKIKAKQNP----WNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK---IGFIKRVF  293 (361)
T ss_dssp             GGCCEEEEESCHHHHHHHHTTSCT----TCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH---SSSEEEEE
T ss_pred             CcceeEEEeCCHHHHHHHHhhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCCceec
Confidence            5   8887 899999988765432    25688888888887763222245677888899999999988   56787 54


Q ss_pred             ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                       ++.+.++++.++. .       ...++.+.|.++||.++++..+.   ....+++|++++   +++++++++++|+++.
T Consensus       294 -~~~~~~~~~~~~~-~-------~~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~  358 (361)
T 3ftb_A          294 -SPHANFVLCRLEN-I-------SGEKLYDSLLKEDIVIRRCCNFI---GLDDSFVRFAIK---DEKKNTKFLRALKGVE  358 (361)
T ss_dssp             -CCSSSEEEEEESS-S-------CHHHHHHHHHTTTEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEcCC-C-------CHHHHHHHHHHCCeEEeeCccCC---CCCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence             5667888888765 2       34578999999999998865431   133679999986   8999999999998876


Q ss_pred             HH
Q psy15447        449 DI  450 (457)
Q Consensus       449 ~~  450 (457)
                      +.
T Consensus       359 ~~  360 (361)
T 3ftb_A          359 NN  360 (361)
T ss_dssp             HT
T ss_pred             hc
Confidence            53

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1e-30  Score=258.70  Aligned_cols=346  Identities=13%  Similarity=0.076  Sum_probs=250.5

Q ss_pred             cCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-----CC-
Q psy15447         69 QKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-----LE-  141 (457)
Q Consensus        69 ~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~-  141 (457)
                      .+.+.+++ .+|+++|||+++.. .+..+|.+.+++.+++....    .+....|..++..++++.+.+.+|     .+ 
T Consensus        18 ~~~~~~~~~~~g~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~----~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~   92 (396)
T 3jtx_A           18 HEAMQGISAPEGMEAVPLHIGEP-KHPTPKVITDALTASLHELE----KYPLTAGLPELRQACANWLKRRYDGLTVDADN   92 (396)
T ss_dssp             HHHTTTCCCCTTCCCEECSCCSC-CSCCCHHHHHHHHHTGGGGG----SCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTT
T ss_pred             HHHHHhhhhccCCCeEEeCCcCC-CCCCCHHHHHHHHHHhhhcc----CCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            34445555 57999999998763 55568999999999886421    122234556777777777777666     34 


Q ss_pred             cEEEecccHHHHHHHHHhhcCCC-----CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhc
Q psy15447        142 ETALYSFGFSTSASAIAAYVKRN-----DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERD  210 (457)
Q Consensus       142 ~~i~~~sG~~a~~~ai~a~~~~g-----d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~  210 (457)
                      .++++++|++++..++.+++++|     |.|++..++|..+...+...|.++..++.+      |++++++.+.+     
T Consensus        93 ~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~-----  167 (396)
T 3jtx_A           93 EILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWK-----  167 (396)
T ss_dssp             SEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHH-----
T ss_pred             eEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhcc-----
Confidence            67788888899999999999996     799999999999988899999998888752      67888888864     


Q ss_pred             ccCCCCccEEEEEecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccC-CCCccccc---cCCCCCCccEEE
Q psy15447        211 TLNSKVTKKFIIVEGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGTLGS-TGHGVTEY---FGVSTEEVDMII  283 (457)
Q Consensus       211 ~~~~~~~~~~vi~e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~-~g~~~~~~---~~~~~~~~Di~~  283 (457)
                            ++++|++++++||+|.+.|.   ++|+++|++||+++|+||+|+.+.++. ...+....   ++.. .+.++++
T Consensus       168 ------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~  240 (396)
T 3jtx_A          168 ------RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRS-RQKLLMF  240 (396)
T ss_dssp             ------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCC-CTTEEEE
T ss_pred             ------CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccc-cCcEEEE
Confidence                  34677777889999999985   459999999999999999998654432 11111110   1111 2447889


Q ss_pred             ecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447        284 GSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       284 ~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      .|+||++|.+|   ||+++++++++.+.....  .++.+.+++.++++.++++..+...+.+++++++.+++.+.|++  
T Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~--  316 (396)
T 3jtx_A          241 TSLSKRSNVPGLRSGFVAGDAELLKNFLLYRT--YHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ--  316 (396)
T ss_dssp             EESTTTSSCGGGCCEEEEECHHHHHHHHHHHH--HHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             eccccccCCcccceEEEEeCHHHHHHHHHHHh--hcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence            99999987655   999999999988865432  23335688888888888764222245677888888999998887  


Q ss_pred             ccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccc---cCCCCCeEEEEecCCCCHHH
Q psy15447        361 VTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQE---AKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       361 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~---~~~~~~~lRi~~~~~~t~ed  436 (457)
                       .  +.+..+..+.++++.++..        ...++++.|++ +||.+.++.++...   .....+++||+++.  ++++
T Consensus       317 -~--~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~--~~~~  383 (396)
T 3jtx_A          317 -V--FDVKLPDASFYIWLKVPDG--------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA--DVAT  383 (396)
T ss_dssp             -T--SCCCCCSSSSEEEEECTTS--------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS--CHHH
T ss_pred             -c--CCccCCCeeEEEEEECCCC--------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC--CHHH
Confidence             2  2233345577888887652        34568888864 69999987754320   01236899999875  9999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        437 MNSLIETLCKSH  448 (457)
Q Consensus       437 i~~~~~~l~~~~  448 (457)
                      +++++++|++++
T Consensus       384 i~~~l~~l~~~l  395 (396)
T 3jtx_A          384 CVKAAEDIVSLY  395 (396)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHh
Confidence            999999998764

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=8.8e-32  Score=271.08  Aligned_cols=342  Identities=12%  Similarity=0.095  Sum_probs=244.8

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C--CCcEEEecccH
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G--LEETALYSFGF  150 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g--~~~~i~~~sG~  150 (457)
                      .+|+++|||+++. .++..+|.+.+++.+++++++....  ...|+......+|++++++++    +  .+.++++++++
T Consensus        66 ~~~~~~i~l~~g~-~~~~~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~  142 (449)
T 3qgu_A           66 NPDAKIISLGIGD-TTEPLPKYIADAMAKAAAGLATREG--YSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK  142 (449)
T ss_dssp             CTTCCCEECSSCC-CCCCCCHHHHHHHHHHHHGGGGSCC--CCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHH
T ss_pred             CCCCCEEEeeCCC-CCCCCCHHHHHHHHHHHHhhccccC--CCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHH
Confidence            4689999999874 5676789999999999987542111  112333344578888888887    3  34556666667


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe----------EEEecCCCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK----------VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~----------~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +++..+ .+++++||.|+++.++|..+...+...|.+          +..++.++.+.+...+.+.         +++++
T Consensus       143 ~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  212 (449)
T 3qgu_A          143 CDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA---------KRTDI  212 (449)
T ss_dssp             HHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC---------CCCSE
T ss_pred             HHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc---------CCCCE
Confidence            787777 888899999999999999999999998988          8888876443332222211         24567


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      |++++++||+|.+.+   +++|+++|++||+++|+||+|+.+.++..+......++.. .+.++++.|+||++|..|   
T Consensus       213 v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~  291 (449)
T 3qgu_A          213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGA-DEVAIETCSFSKYAGFTGVRL  291 (449)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTG-GGTEEEEEECSGGGTCTTCCC
T ss_pred             EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCC-CCcEEEEecchhhcCCcccee
Confidence            777799999999988   7789999999999999999998765543222222222211 245799999999998666   


Q ss_pred             cEEEecHHHHH--------HHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447        295 GFCVGSSYIIE--------HHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVTQR  364 (457)
Q Consensus       295 G~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~  364 (457)
                      ||+++++++++        .+.... ...++ +.+++.++++.++++.  .+..++++++++++.+++.+.|++    .|
T Consensus       292 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g  365 (449)
T 3qgu_A          292 GWTVVPKALKYANGEPVHADWNRVM-TTCFN-GASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTE----MG  365 (449)
T ss_dssp             EEEECCTTCBCTTSCBHHHHHHHHH-HHSCC-CCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHH----TT
T ss_pred             EEEecCHHHHhhhhhhHHHHHHHHh-hcccC-CCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH----CC
Confidence            99999887764        222111 12222 3578888888777654  222345788899999999999998    47


Q ss_pred             eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      +.+..+..++++++.++ ..       ...++++.|+++ ||++.++..+.   +.+.+++||++.  .|++++++++++
T Consensus       366 ~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~l~~~~gI~v~pg~~f~---~~~~~~iRis~~--~~~e~i~~~l~~  432 (449)
T 3qgu_A          366 FSVYGGDDAPYIWVGFP-GK-------PSWDVFAEILERCNIVTTPGSGYG---PAGEGFVRASAF--GSRENILEAVRR  432 (449)
T ss_dssp             CCEEESSSSSEEEEECT-TS-------CHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEECC--SCHHHHHHHHHH
T ss_pred             CeeeCCCCeeEEEEECC-CC-------CHHHHHHHHHHHCCEEEecchHhC---CCCCCeEEEEec--CCHHHHHHHHHH
Confidence            77765566888888887 33       345788888876 99998876532   123589999954  599999999999


Q ss_pred             HHHHHHHh
Q psy15447        444 LCKSHDIA  451 (457)
Q Consensus       444 l~~~~~~~  451 (457)
                      |+++++.-
T Consensus       433 l~~~~~~~  440 (449)
T 3qgu_A          433 FKEAYGKR  440 (449)
T ss_dssp             HHHHHC--
T ss_pred             HHHHHHhc
Confidence            99887543

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=6.3e-31  Score=257.61  Aligned_cols=321  Identities=10%  Similarity=0.046  Sum_probs=245.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSAS  155 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~  155 (457)
                      .+++|||+++. ..+..+|++.+++.+++.+.....      |+ .+...++++++++++|.   +.++++++|++|+..
T Consensus        29 ~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~------y~-~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~  100 (367)
T 3euc_A           29 SHGLVKLDAME-NPYRLPPALRSELAARLGEVALNR------YP-VPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISM  100 (367)
T ss_dssp             CTTCEECCSSC-CCCCCCHHHHHHHHHHHHHHHTTC------SC-CCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHH
T ss_pred             CCCeeEccCCC-CCCCCCHHHHHHHHHHhhhhhhhc------CC-CCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHH
Confidence            36789999875 345568999999999998532111      11 12357899999999997   567788888899999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      ++++++++||.|++..+.|..+...++..|.++..++.     .|++++++.+++.          ++++|++++++||+
T Consensus       101 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~npt  170 (367)
T 3euc_A          101 LALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEH----------QPAIVYLAYPNNPT  170 (367)
T ss_dssp             HHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHH----------CCSEEEEESSCTTT
T ss_pred             HHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhcc----------CCCEEEEcCCCCCC
Confidence            99999999999999999998888888888999888774     3899999998752          34677788999999


Q ss_pred             CCCCC---hHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH
Q psy15447        231 ADICP---LKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY  302 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~  302 (457)
                      |.+.|   +++|+++|++|  |+++|+||+|+... +   .+.....+.  .+.++++.|+||+ +..|   ||++++++
T Consensus       171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~-~---~~~~~~~~~--~~~~i~~~s~sK~-~~~G~r~G~~~~~~~  243 (367)
T 3euc_A          171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA-Q---ESWMSRLTD--FGNLLVMRTVSKL-GLAGIRLGYVAGDPQ  243 (367)
T ss_dssp             CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS-S---CCSGGGGGT--CTTEEEEEECCCT-TSCSCCEEEEEECHH
T ss_pred             CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc-c---cchHHHHhh--CCCEEEEecchhh-cccccCceeeeeCHH
Confidence            99976   67888889999  99999999997532 1   112212222  2346889999999 6555   99999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +++.+......    .+.+++.++++.++++..+..++.+++++++.+++.+.|++   ++++.+. ++.+.++++.++ 
T Consensus       244 ~~~~~~~~~~~----~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~---~~g~~~~-~~~~~~~~~~~~-  314 (367)
T 3euc_A          244 WLEQLDKVRPP----YNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAA---HGGVTVF-PSAANFLLARVP-  314 (367)
T ss_dssp             HHHHHGGGCCS----SCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHT---STTCEEC-CCSSSEEEEECS-
T ss_pred             HHHHHHHhCCC----CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh---CCCcEEC-CCCCeEEEEECC-
Confidence            99888755432    24688888888888765322345778888999999999988   4688754 566778888776 


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      +         ..++.+.|.++||+++++..+.   ....+++|++++   |++|+++++++|++++
T Consensus       315 ~---------~~~l~~~l~~~gi~v~~~~~~~---~~~~~~iRis~~---~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          315 D---------AAQTFDRLLARKVLIKNVSKMH---PLLANCLRVTVS---TPEENAQFLEAFAASL  365 (367)
T ss_dssp             C---------HHHHHHHHHTTTEECEECGGGC---GGGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred             C---------HHHHHHHHHHCCeEEEECCccC---CCCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence            2         2468888999999998765431   123579999976   8999999999999875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=2.9e-31  Score=262.94  Aligned_cols=343  Identities=13%  Similarity=0.144  Sum_probs=247.2

Q ss_pred             CeeeEEeecCC--ccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC--CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHN--YLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL--EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~--~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~  154 (457)
                      ++++|||+++.  +.++ +++++.+++.+++++.+....    .|+......++++.+++++|.  +.++++++|++++.
T Consensus        31 ~~~~i~l~~g~~~~~~~-~~~~v~~a~~~~~~~~~~~~~----~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~  105 (397)
T 2zyj_A           31 RPGILSFAGGLPAPELF-PKEEAAEAAARILREKGEVAL----QYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALD  105 (397)
T ss_dssp             STTCEEESSCCCCGGGC-CHHHHHHHHHHHHHHHHHHHT----SCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred             CCCceecCCCCCCchhC-CHHHHHHHHHHHHHhcchhhh----CCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHH
Confidence            45789998763  3222 468899999999876421000    111222347788899998885  45677777889999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEE-EEecCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFI-IVEGVYMN  229 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~v-i~e~v~~~  229 (457)
                      .++++++++||.|++..+.|..+...+...|.++..++.    .|++++++.+++.          ++++| ++++++||
T Consensus       106 ~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~~np  175 (397)
T 2zyj_A          106 LVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRE----------RPRFLYLIPSFQNP  175 (397)
T ss_dssp             HHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHC----------CCSCEEECCBSCTT
T ss_pred             HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCCCCCHHHHHHHHhhc----------CCeEEEECCCCcCC
Confidence            999999999999999999999998888889988887765    3899999988751          23454 67888999


Q ss_pred             CCCCCCh---HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC---CccEEEecCcccccCcc---cEEEec
Q psy15447        230 SADICPL---KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE---EVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       230 ~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~---~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +|.+.|.   ++|+++|++||+++|+||+|+.+.++.........++  ++   +.+++++|+||++| +|   ||++++
T Consensus       176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~--~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~  252 (397)
T 2zyj_A          176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELA--REAGYPGVIYLGSFSKVLS-PGLRVAFAVAH  252 (397)
T ss_dssp             TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHH--HHHTCCCEEEEEESTTTTC-GGGCCEEEECC
T ss_pred             CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhC--cccCCCeEEEEeccccccc-ccceeEEEecC
Confidence            9999884   5999999999999999999987654321111111122  11   23588999999998 54   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhcccccC-CeEEeccCCCCeEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVTQ-RFLVQGHRDTPLKY  377 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~  377 (457)
                      +++++.+......+.++  .+++.++++.++++..  +..++.+++++++.+++.+.|++.  .+ |+.+..+..+.+++
T Consensus       253 ~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~g~~~~~~~~g~~~~  328 (397)
T 2zyj_A          253 PEALQKLVQAKQGADLH--TPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE--VPKEVRYTRPKGGMFVW  328 (397)
T ss_dssp             HHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH--SCTTSEECCCSBSSEEE
T ss_pred             HHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCeEEccCCccEEEE
Confidence            99988876544333333  3777777777776532  112345677788888898888761  13 67765555678888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.++...       ...++.+.|.++||.+.++..+... ....+++||+++.. |++|+++++++|+++++++.
T Consensus       329 ~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~  394 (397)
T 2zyj_A          329 MELPKGL-------SAEGLFRRALEENVAFVPGGPFFAN-GGGENTLRLSYATL-DREGIAEGVRRLGRALKGLL  394 (397)
T ss_dssp             EECSTTC-------CHHHHHHHHHHTTEEEEESGGGCTT-SCCTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcCCCC-------CHHHHHHHHHHCCCEEechHHhcCC-CCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence            8886533       3457899999999999886543210 12357999999874 89999999999999887653

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=1e-30  Score=261.11  Aligned_cols=350  Identities=13%  Similarity=0.080  Sum_probs=248.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~  153 (457)
                      +..+|||+.+.. ++..+|++.+++.+++.+.. ....+....|..+...++++.+.+.+|.     +.++++++|++|+
T Consensus        27 ~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~-~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~  104 (422)
T 3fvs_A           27 EHDVVNLGQGFP-DFPPPDFAVEAFQHAVSGDF-MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL  104 (422)
T ss_dssp             TSCCEECCCSSC-SSCCCHHHHHHHHHHHHSCG-GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred             cCCceEeCCCCC-CCCCCHHHHHHHHHHHhCCC-ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHH
Confidence            457899998764 56678999999999997622 0111222234455666666666655553     4678888889999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----------------CHHHHHHHHHhhchhcccCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----------------NMQHLEELLRQQDERDTLNSKV  216 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----------------d~~~le~~l~~~~~~~~~~~~~  216 (457)
                      ..++.+++++||.|++..++|..+...+...|.++..++.+                 |++++++.++           +
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~-----------~  173 (422)
T 3fvs_A          105 FTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFT-----------S  173 (422)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCC-----------T
T ss_pred             HHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcC-----------C
Confidence            99999999999999999999988888888899888877643                 6777777663           2


Q ss_pred             ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc
Q psy15447        217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      ++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++.........++.. .+.++++.|+||++|..
T Consensus       174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~g~~  252 (422)
T 3fvs_A          174 RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM-WERTLTIGSAGKTFSAT  252 (422)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT-GGGEEEEEEHHHHHTCG
T ss_pred             CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccc-cCcEEEEecchhccCCc
Confidence            4678888899999999996   8899999999999999999998655432211111122211 24468899999999865


Q ss_pred             c---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hh-CcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        294 G---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KA-NPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       294 g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~-~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      |   ||+++++++++.+........+  +.+++.++++.++++..       ++ .++++++++++.+++.+.|++    
T Consensus       253 G~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  326 (422)
T 3fvs_A          253 GWKVGWVLGPDHIMKHLRTVHQNSVF--HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS----  326 (422)
T ss_dssp             GGCCEEEECCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             cceEEEEEeCHHHHHHHHHHHhhccC--CCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence            5   9999999998887654322223  34788888888887641       11 135678888999999999998    


Q ss_pred             CCeEEeccCCCCeEEEEecCCcch-H-----HHHHHHHHHHHHHHH-cCeeEeccccCcc--ccCCCCCeEEEEecCCCC
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKSDDE-V-----ASKKLLQTICDMCIQ-AGFAITCPSHLDQ--EAKKQKPSIRITCNISHT  433 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~--~~~~~~~~lRi~~~~~~t  433 (457)
                      .|+.+..+..+.++++.+...... .     .......++++.+++ +||++.++..+..  ..+...+++||+++.  |
T Consensus       327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~  404 (422)
T 3fvs_A          327 VGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--D  404 (422)
T ss_dssp             TTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--C
T ss_pred             cCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--C
Confidence            588776666778888776431000 0     000013467777655 6999988764321  001346899999875  9


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCKSHDI  450 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~~  450 (457)
                      ++++++++++|++++++
T Consensus       405 ~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          405 EATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998764

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=3.4e-31  Score=260.32  Aligned_cols=328  Identities=11%  Similarity=0.101  Sum_probs=241.0

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAI  157 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai  157 (457)
                      .+.++..++++.+..++.  +++.+++......       |+......+|++.++++++   .+.++++++|++|+..++
T Consensus        28 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------y~~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~   98 (375)
T 3op7_A           28 SISSLTLEELFALSGTNP--EDFYKKLQGTKLN-------YGWIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVL   98 (375)
T ss_dssp             SCCCCCHHHHHHHHTCCH--HHHHHHHHTSCCS-------SCCTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHH
T ss_pred             CCCCccHHHHHhhcccch--HHHHHHHhcCCcC-------CCCCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHH
Confidence            333444444444443332  5666666552222       2233335789999999863   467888999999999999


Q ss_pred             HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      .+++++||.|++..+.|..+...+...|.++..++.+       |++++++.++.           ++++|++++++||+
T Consensus        99 ~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~~~npt  167 (375)
T 3op7_A           99 YSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-----------TTKMICINNANNPT  167 (375)
T ss_dssp             HHHCCTTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-----------TCCEEEEESSCTTT
T ss_pred             HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-----------CCeEEEEcCCCCCC
Confidence            9999999999999999999988999999988877643       88899888742           45688889999999


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYII  304 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~  304 (457)
                      |.+.|   +++|+++|++||+++|+||+|+.+..+. .....+.+     +.+++++|+||++|.+|   |+++++++++
T Consensus       168 G~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~-~~~~~~~~-----~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~  241 (375)
T 3op7_A          168 GAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELD-VPSIIEVY-----DKGIAVNSLSKTYSLPGIRIGWVAANHQVT  241 (375)
T ss_dssp             CCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSC-CCCHHHHC-----TTEEEEEESSSSSSCGGGCCEEEECCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccC-CCchhhhc-----CCEEEEeEChhhcCCcccceEEEEeCHHHH
Confidence            99999   9999999999999999999998654431 11122222     23588899999997555   9999999999


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      +.++.....+.  .+.+++.++++.++++..++. +..+++++++.+++.+.|++   .+++.+..+..+...++.+...
T Consensus       242 ~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~  316 (375)
T 3op7_A          242 DILRDYRDYTM--ICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE---EPLVSYIRPAVVSTSFVKIAVD  316 (375)
T ss_dssp             HHHTTTGGGTT--SCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH---CTTEEECCCSSSSCEEEEECCS
T ss_pred             HHHHHHHhhhc--cCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh---CCCceEecCCCeEEEeEEcCCC
Confidence            98865443333  334788888887777654332 34566778888999999987   4678776555666777777654


Q ss_pred             cchHHHHHHHHHHHHHH-HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        384 DDEVASKKLLQTICDMC-IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .       ...++++.| .++||.+.++..+     ...+++|++++.  +++++++++++|+++++++..
T Consensus       317 ~-------~~~~~~~~ll~~~gi~v~~g~~~-----~~~~~iRi~~~~--~~~~i~~~l~~l~~~l~~~~~  373 (375)
T 3op7_A          317 M-------PMEDFCLQLLQEHGVLLVPGNRF-----ERDGYVRLGFAC--EQETLIKGLEKLSQFLRRFDK  373 (375)
T ss_dssp             S-------CHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEECCCS--CHHHHHHHHHHHHHHHGGGC-
T ss_pred             C-------CHHHHHHHHHHhCCEEEeChhhh-----CCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHhh
Confidence            3       345777887 4789999887643     236899999764  569999999999999887653

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=1.6e-30  Score=256.50  Aligned_cols=334  Identities=15%  Similarity=0.139  Sum_probs=240.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~  154 (457)
                      ..+|||.++.+ +++.+|.+.+++.+++++ +..  .+....|..++.+++++.+.+.+|.    + .++++++|++|+.
T Consensus        30 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~-~~~--~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~  105 (386)
T 1u08_A           30 HQAINLSQGFP-DFDGPRYLQERLAHHVAQ-GAN--QYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALY  105 (386)
T ss_dssp             TTCEECCCSSC-SSCCCHHHHHHHHHHHHT-TCC--SCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHH
T ss_pred             CCeEEecCCCC-CCCCCHHHHHHHHHHHHh-hcc--CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHH
Confidence            35899988755 555689999999999876 211  1111223445555555555444563    4 6788888899999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      .++++++++||.|++..+.|..+...++..|.++..++.      .|++++++.+.           +++++|++++++|
T Consensus       106 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v~l~~p~n  174 (386)
T 1u08_A          106 AAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-----------ERTRLVILNTPHN  174 (386)
T ss_dssp             HHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-----------TTEEEEEEESSCT
T ss_pred             HHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhc-----------ccCEEEEEeCCCC
Confidence            999999999999999999999888888999998887765      47888888773           2457888889999


Q ss_pred             CCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEecH
Q psy15447        229 NSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       229 ~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      |+|.+.|   +++|+++|++||+++|+||+|+.+.++.  ........+. ..+.|+++.|+||++|++|   ||+++++
T Consensus       175 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~  252 (386)
T 1u08_A          175 PSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--QGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA  252 (386)
T ss_dssp             TTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCS--SCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH
T ss_pred             CCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCC--CCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH
Confidence            9999987   6899999999999999999998755532  2111111111 1235899999999998655   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.++.......+  +.+++.++++.++++..++ .++++++++++.+++.+.|++    .|+.+..+..+.++++.+
T Consensus       253 ~~~~~l~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~  326 (386)
T 1u08_A          253 PISAEIRKVHQYLTF--SVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE----SRLEILPCEGTYFLLVDY  326 (386)
T ss_dssp             HHHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS----SSCEECCCCBSSEEEEEC
T ss_pred             HHHHHHHHHHHhhcc--CCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCceEEEEEec
Confidence            998887654322223  3467777777777765321 234678888999999999988    477776555567888887


Q ss_pred             cCC--cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        381 QKS--DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       381 ~~~--~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      +..  .       ...+++++|. ++||.+.++..+.. .+...+++|++++  .+++++++++++|++
T Consensus       327 ~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~-~~~~~~~iRis~~--~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          327 SAVSTL-------DDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA--KKESTLLAAAERLRQ  385 (386)
T ss_dssp             TTTCCS-------CHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred             CCCCCC-------CHHHHHHHHHHhCCEEEeCchHhCC-CCCCCCEEEEEEc--CCHHHHHHHHHHHhh
Confidence            643  2       2457888887 57999987653211 0123578999997  489999999998864

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=1.1e-30  Score=258.82  Aligned_cols=334  Identities=11%  Similarity=0.054  Sum_probs=241.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      |+++|||++++ ..+..+|++.+++.+++++.+.. ..++....|..++..++++.+.+.+|    .+.++++++|++|+
T Consensus        34 ~~~~i~l~~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al  112 (398)
T 3ele_A           34 KENVYDFSIGN-PSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASL  112 (398)
T ss_dssp             GGGCEECCSCC-CCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred             CCCeEEeecCC-CCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHH
Confidence            57899999874 35556899999999999873211 11122223456666667766666655    34677788889999


Q ss_pred             HHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++| |.|++..++|..+...+...|.++..++.+      |++++++.+++           ++++|+++++
T Consensus       113 ~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p  181 (398)
T 3ele_A          113 SICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADTEHFQIDFDALEERINA-----------HTRGVIINSP  181 (398)
T ss_dssp             HHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCT-----------TEEEEEECSS
T ss_pred             HHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCc-----------CCCEEEEcCC
Confidence            99999999999 999999999999999999999999988765      78888877642           4577888899


Q ss_pred             CCCCCCCCC---hHHHHHHHHH------cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---
Q psy15447        227 YMNSADICP---LKDILSLRSK------YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~------~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      +||+|.+.|   +++|+++|++      ||+++|+||+|+.+.++.  .......+.  .+.+++++|+||++|.+|   
T Consensus       182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~  257 (398)
T 3ele_A          182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG--IKVPFVTKY--YDNTLVCYSYSKSLSLPGERI  257 (398)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTT--CCCCCGGGT--CSSEEEEEESTTTSSCTTTCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCC--CCcCChHhh--cCCeEEEEehhhcCCCcccee
Confidence            999999999   6778899999      999999999998655432  111111111  234689999999998655   


Q ss_pred             cEEEecHHHHH------HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        295 GFCVGSSYIIE------HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       295 G~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      ||+++++++++      .+...... ....+.+++.++++.+.++   .. ..+++++++.+++.+.|++    .++.+.
T Consensus       258 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~---~~-~~~~~~~~~~~~l~~~L~~----~g~~~~  328 (398)
T 3ele_A          258 GYVLVPDEVYDKAELYAAVCGAGRA-LGYVCAPSLFQKMIVKCQG---AT-GDINAYKENRDLLYEGLTR----IGYHCF  328 (398)
T ss_dssp             EEEECCTTSTTHHHHHHHHHHHHHH-TTCCCSCHHHHHHHTTCTT---CC-CCHHHHHHHHHHHHHHHHH----HTCCEE
T ss_pred             EEEEEcchhhhHHHHHHHHHHHhhh-ccccCCCHHHHHHHHHHhc---CH-HHHHHHHHHHHHHHHHHHH----cCCeec
Confidence            99998876432      22211111 1112345566555544432   22 2568889999999999988    466666


Q ss_pred             ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .+..+.++++.++..        ...++.+.|.++||.+.++..+     ..++++||+++  ++++++++++++|++++
T Consensus       329 ~~~~~~~~~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~--~~~e~i~~~l~~l~~~l  393 (398)
T 3ele_A          329 KPDGAFYMFVKALED--------DSNAFCEKAKEEDVLIVAADGF-----GCPGWVRISYC--VDREMIKHSMPAFEKIY  393 (398)
T ss_dssp             CCSBSSEEEEECSSS--------CHHHHHHHHHTTTEECEESGGG-----TCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEEEcCCC--------CHHHHHHHHHHCCEEEeCcccc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence            555566688877643        2457888899999999887653     23579999986  69999999999999998


Q ss_pred             HHhc
Q psy15447        449 DIAV  452 (457)
Q Consensus       449 ~~~~  452 (457)
                      ++++
T Consensus       394 ~~~~  397 (398)
T 3ele_A          394 KKYN  397 (398)
T ss_dssp             HHHC
T ss_pred             HHhh
Confidence            8764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.5e-30  Score=259.49  Aligned_cols=340  Identities=13%  Similarity=0.093  Sum_probs=241.0

Q ss_pred             eeeEEeecCCc---cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC--------------CCc
Q psy15447         80 IPCINFATHNY---LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG--------------LEE  142 (457)
Q Consensus        80 ~~~id~~s~~~---l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------------~~~  142 (457)
                      ++++||.++++   ..+..+|.+.+++.+++++....  +    |+......++++.++++++              .+.
T Consensus        33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~  106 (416)
T 1bw0_A           33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECN--G----YFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDN  106 (416)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSS--S----CCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGG
T ss_pred             CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccC--C----cCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcce
Confidence            56899988764   35667899999999999763211  1    1122223556666666655              456


Q ss_pred             EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCC
Q psy15447        143 TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       143 ~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      ++++++|++|+..++.+++++||.|++..+.|..+...++..|.++..++.       .|++++++.+++          
T Consensus       107 v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~----------  176 (416)
T 1bw0_A          107 VVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDD----------  176 (416)
T ss_dssp             EEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT----------
T ss_pred             EEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhcc----------
Confidence            788888899999999999999999999999999888888889988877653       378888887742          


Q ss_pred             CccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC--ccccccCCCCCCccEEEecCcccc
Q psy15447        216 VTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH--GVTEYFGVSTEEVDMIIGSLEHAL  290 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~--~~~~~~~~~~~~~Di~~~s~sK~l  290 (457)
                       +++++++.+++||+|.+.|   +++|+++|++||+++|+||+|+...++....  .......+.++..+++++|+||++
T Consensus       177 -~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~  255 (416)
T 1bw0_A          177 -KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL  255 (416)
T ss_dssp             -TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT
T ss_pred             -CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC
Confidence             3456777778999999999   8999999999999999999998754432100  122222233333368889999998


Q ss_pred             cCcc---cEEEecHH--HHHHHHhhCCcc-eecCCCcHHHHHHHHHHHHHH--hhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        291 GSVG---GFCVGSSY--IIEHHRLSGSGY-CFSASLPPFLAVAANKALHLL--KANPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       291 g~~g---G~v~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~l~~~--~~~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      +.+|   ||+++++.  +++.+......+ ..+.+.+++.++++.++++..  +..++.+++++++.+++.+.|++   .
T Consensus       256 ~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~  332 (416)
T 1bw0_A          256 VVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE---C  332 (416)
T ss_dssp             SCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT---S
T ss_pred             CCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHh---C
Confidence            6554   89887653  433332110001 122345788888888887642  11235678888999999999988   4


Q ss_pred             CCeEEeccCCCCeEEEEecCC-----cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKS-----DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                      +++.+..+..+.++++.++..     .       ...++++.|+ ++||.+.++..+     ..++++|+++.  +++++
T Consensus       333 ~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f-----~~~~~iRis~~--~~~e~  398 (416)
T 1bw0_A          333 IGLAPTMPRGAMYLMSRIDLEKYRDIK-------TDVEFFEKLLEEENVQVLPGTIF-----HAPGFTRLTTT--RPVEV  398 (416)
T ss_dssp             TTEEECCCCBTTEEEEEECGGGBSSCC-------SHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECC--SCHHH
T ss_pred             CCCcccCCCeeEEEEEeCCHHHcCCCC-------CHHHHHHHHHHHCCEEEeccccc-----CCCCeEEEEec--CCHHH
Confidence            588776555577888777531     1       2456888875 789999887643     23579999995  68999


Q ss_pred             HHHHHHHHHHHHHHhcC
Q psy15447        437 MNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       437 i~~~~~~l~~~~~~~~~  453 (457)
                      ++++++.|++++++...
T Consensus       399 l~~~l~~l~~~l~~~~~  415 (416)
T 1bw0_A          399 YREAVERIKAFCQRHAA  415 (416)
T ss_dssp             HHHHHHHHHHHHHHHBC
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999887653

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=2.7e-30  Score=252.92  Aligned_cols=328  Identities=11%  Similarity=0.045  Sum_probs=238.7

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      +|++++||+++.. .++.+|++.+++.+++++.. .+       +. ....++++++++++|.+  .++++++|++++..
T Consensus        22 ~~~~~idl~~~~~-~~~~~~~v~~a~~~~~~~~~-~y-------~~-~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~   91 (364)
T 1lc5_A           22 SPDQLLDFSANIN-PLGMPVSVKRALIDNLDCIE-RY-------PD-ADYFHLHQALARHHQVPASWILAGNGETESIFT   91 (364)
T ss_dssp             CGGGSEECSSCCC-TTCCCHHHHHHHHHTGGGGG-SC-------CC-TTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHH
T ss_pred             CccceEEeccccC-CCCCCHHHHHHHHHHHHHhh-cC-------CC-CCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHH
Confidence            6789999988753 45568999999999886521 11       11 12478999999999864  56777788899999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHH---HHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQH---LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~---le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      ++.++  +||.|++..+.|..+...++..|.++..++.++.+.   +++.++...        +++++|++++++||+|.
T Consensus        92 ~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~--------~~~~~v~i~~p~nptG~  161 (364)
T 1lc5_A           92 VASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT--------PDLDCLFLCTPNNPTGL  161 (364)
T ss_dssp             HHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCC--------TTCCEEEEESSCTTTCC
T ss_pred             HHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccchhHHHHHhcc--------CCCCEEEEeCCCCCCCC
Confidence            99988  679999999999888888888999988887642111   233343322        23466777778999999


Q ss_pred             CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEE-ecHHHHH
Q psy15447        233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV-GSSYIIE  305 (457)
Q Consensus       233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~-~~~~~~~  305 (457)
                      +.|   +++|+++|++||+++|+||+|+.+.++  +.......+.  .+.|+++.|+||++|.+|   ||++ +++++++
T Consensus       162 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  237 (364)
T 1lc5_A          162 LPERPLLQAIADRCKSLNINLILDEAFIDFIPH--ETGFIPALKD--NPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMA  237 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT--CCCSGGGCTT--CTTEEEEEESTTTTTCTTTCCEEEECCCHHHHH
T ss_pred             CCCHHHHHHHHHHhhhcCcEEEEECcChhhccC--ccchhhHhcc--CCCEEEEEECchhhcCCccceEEEEECCHHHHH
Confidence            999   899999999999999999999865543  2333332222  234789999999998555   9998 9999998


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .++.....    .+.+++.++++.++++..+..++.+++++++.+++.+.|++   .+++.+. ++.++++++.++.+  
T Consensus       238 ~l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~g~~~~~~~~~~--  307 (364)
T 1lc5_A          238 RMRRQQMP----WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ---LPLLTVY-PGRANYLLLRCERE--  307 (364)
T ss_dssp             HHHHHSCT----TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT---STTEEEC-CCSSSEEEEEESCT--
T ss_pred             HHHHhCCC----CCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc---CCCCEEC-CCCCeEEEEECCCc--
Confidence            88765432    24588888888777754222234667788889999999987   4588775 45677888877542  


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                             ..++.+.|.++||.+.++..+.   ....+++|+++.   +++|+++++++|+++++++.
T Consensus       308 -------~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~---~~~~~~~l~~~l~~~~~~~~  361 (364)
T 1lc5_A          308 -------DIDLQRRLLTQRILIRSCANYP---GLDSRYYRVAIR---SAAQNERLLAALRNVLTGIA  361 (364)
T ss_dssp             -------TCCHHHHHHTTTEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHC----
T ss_pred             -------HHHHHHHHHHCCcEEeeCcccC---CCCCCEEEEEeC---CHHHHHHHHHHHHHHhhccc
Confidence                   1258888999999998865321   123579999975   69999999999999887664

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=7.5e-31  Score=257.89  Aligned_cols=333  Identities=11%  Similarity=-0.005  Sum_probs=240.1

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      +| ++|||+++.. .+..+|.+.+++.+++....    .+....|..++..++++.+.+.+|.    +.++++++|++++
T Consensus        22 ~g-~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~----~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al   95 (376)
T 3ezs_A           22 KK-RGLDLGIGEP-QFETPKFIQDALKNHTHSLN----IYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVL   95 (376)
T ss_dssp             SS-CCCBCSSCCC-CSCCCHHHHHHHHTTGGGGG----SCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHH
T ss_pred             cC-CEEEeCCCCC-CCCCCHHHHHHHHHhhhhcC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHH
Confidence            57 8999988753 44567999999988874321    1222234556666666666666564    4678888999999


Q ss_pred             HHHHHhhcCC--CCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHH----HHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKR--NDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQ----HLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~--gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~----~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++++++++  ||.|++..++|..+...+...|.++..++.++.+    ++++.+.+           ++++|++++++
T Consensus        96 ~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~v~~~~p~  164 (376)
T 3ezs_A           96 FNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQ-----------EVDLVILNSPN  164 (376)
T ss_dssp             HHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHH-----------HCSEEEECSSC
T ss_pred             HHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcchhHHhhhcc-----------CCCEEEEcCCC
Confidence            9999999999  9999999999999999999999999988865332    45555543           23577777889


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC---CCCCCccEEEecCcccccCcc---cEEE
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG---VSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~---~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      ||+|.+.|   +++|+++|++||+++|+||+|+.+.++.....+....+   ....+.++++.|+||++|..|   ||++
T Consensus       165 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~  244 (376)
T 3ezs_A          165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA  244 (376)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEE
T ss_pred             CCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEe
Confidence            99999988   66888889999999999999987655432222222110   001244788999999997655   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      +++++++.+........+  +.+++.++++.++++..+..++.+++++++.+++.+.|+      ++.  .+..+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~------~~~--~~~~~~~~~~  314 (376)
T 3ezs_A          245 GDSRLLEKYKAFRAYLGY--TSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK------NTL--IYPYSFYVYL  314 (376)
T ss_dssp             ECHHHHHHHHHHHTTTCC--CCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST------TCC--CCSBSSEEEE
T ss_pred             eCHHHHHHHHHHHhhhcC--CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc------CCC--CCCcceEEEE
Confidence            999999888765433333  458888888888876432224466777777888877765      332  3456778888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+++          ..++++.|++ +||++.++..+... ....+++||+++.  |++|+++++++|++++++
T Consensus       315 ~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~~--~~~~i~~~l~~l~~~l~~  374 (376)
T 3ezs_A          315 PVQN----------GENFAKTLYQNEGIITLPALYLGRN-RIGADYVRLALVY--DTPLLEKPLEIIETYREN  374 (376)
T ss_dssp             ECSC----------HHHHHHHHHHHHCCBCEEGGGGCST-TTTTTEEEEECCS--CHHHHHHHHHHHHHHHCC
T ss_pred             ECCC----------HHHHHHHHHHhCCEEEeCcHHhCCC-CCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence            7762          2468888888 89999887654310 1246899999874  999999999999988753

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.98  E-value=2e-30  Score=258.07  Aligned_cols=339  Identities=15%  Similarity=0.115  Sum_probs=240.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----C-cEEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----E-ETALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~-~~i~~~sG~~a~~~  155 (457)
                      .+|||.++.+ +++.+|.+.+++.+++++. .  ..+....|..++.+++++.+.+.+|.    + .++++++|++|+..
T Consensus        26 ~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~-~--~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~  101 (411)
T 2o0r_A           26 GAVNLGQGFP-DEDGPPKMLQAAQDAIAGG-V--NQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAA  101 (411)
T ss_dssp             TCEESSCSSC-SSCCCHHHHHHHHHHHHTT-C--CSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHH
T ss_pred             CeeeccCcCC-CCCCCHHHHHHHHHHHhcC-C--CCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHH
Confidence            4789987654 4556899999999999762 1  11211223444555555555444463    3 67888888999999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ++.+++++||.|++..+.|.++...+...|.++..++.        .|++++++.+++           ++++|++++++
T Consensus       102 ~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~l~~~~  170 (411)
T 2o0r_A          102 AVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTP-----------RTRALIINSPH  170 (411)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCT-----------TEEEEEEESSC
T ss_pred             HHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhcc-----------CceEEEEeCCC
Confidence            99999999999999999998888888889988877764        478888887742           45778888999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC-CCCccEEEecCcccccCcc---cEEEec
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS-TEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~-~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      ||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |........+. ..+.|+++.|+||++|.+|   |+++++
T Consensus       171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  248 (411)
T 2o0r_A          171 NPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFD--HARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP  248 (411)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCT--TCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccC--CCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeC
Confidence            99999988   589999999999999999999876553  22111111221 1356899999999998555   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +++++.+........++  .+++.++++.++++..++ .++++++++++.+++.+.|++    .|+.+..+..+.++++.
T Consensus       249 ~~~~~~l~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~  322 (411)
T 2o0r_A          249 AELIAGVRAAKQYLSYV--GGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTE----IGFAVHDSYGTYFLCAD  322 (411)
T ss_dssp             HHHHHHHHHHHHHHTSC--CCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HTCEECCCCBSSEEEEE
T ss_pred             HHHHHHHHHHHhhccCC--CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCEecCCCeeEEEEEe
Confidence            99888876543222233  355556666677764322 235678888999999999988    47777644456678888


Q ss_pred             ecCC--cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCC----------CCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        380 LQKS--DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKK----------QKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       380 ~~~~--~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~----------~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      +...  .       ...++.++|+ ++||.+.++..+..  ..          ..+++||+++  .+++++++++++|++
T Consensus       323 ~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~--~~~~~~~~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~  391 (411)
T 2o0r_A          323 PRPLGYD-------DSTEFCAALPEKVGVAAIPMSAFCD--PAAGQASQQADVWNHLVRFTFC--KRDDTLDEAIRRLSV  391 (411)
T ss_dssp             CGGGTCC-------CHHHHHHHHHHHHSEECEEGGGGSC--CC--------CCGGGCEEEECC--SCHHHHHHHHHHHGG
T ss_pred             cCCCCCC-------CHHHHHHHHHHhCCEEEcChhhhCC--CccccccccccCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence            7641  1       2457888877 57999987654311  11          2478999986  489999999999998


Q ss_pred             HHHHhcC
Q psy15447        447 SHDIAVQ  453 (457)
Q Consensus       447 ~~~~~~~  453 (457)
                      ++++...
T Consensus       392 ~~~~~~~  398 (411)
T 2o0r_A          392 LAERPAT  398 (411)
T ss_dssp             GGC----
T ss_pred             HHhccCc
Confidence            7765543

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.98  E-value=4.2e-30  Score=253.59  Aligned_cols=332  Identities=13%  Similarity=0.097  Sum_probs=240.3

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~  154 (457)
                      |+.++||+.+.+ .+..++.+.+++.+.++....   .+....|..++..++++.+.+..|.    +.++++++|++|+.
T Consensus        30 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~---~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~  105 (385)
T 1b5p_A           30 GVDLVALTAGEP-DFDTPEHVKEAARRALAQGKT---KYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALF  105 (385)
T ss_dssp             TCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCC---SCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHH
T ss_pred             CCCEEEecCCCC-CCCCCHHHHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHH
Confidence            567899988765 455568899999988865211   1222234555666666666554452    46778888899999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.+++++||.|++..++|..+...++..|.++..++.+       |++++++.+.+           ++++|++.+++
T Consensus       106 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~p~  174 (385)
T 1b5p_A          106 NLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP-----------RTKALVVNSPN  174 (385)
T ss_dssp             HHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT-----------TEEEEEEESSC
T ss_pred             HHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC-----------CCEEEEEeCCC
Confidence            9999999999999999999999988889999998887752       56777766532           35677788899


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.|   +++|.++|++||+++|+||+|+.+.++.  . ......+.+ +.+++++||||.+|.+|   ||+++++
T Consensus       175 NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~-~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~  250 (385)
T 1b5p_A          175 NPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG--E-HFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPK  250 (385)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS--C-CCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred             CCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--C-CCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCH
Confidence            99999988   8899999999999999999998765532  1 111122333 45799999999998655   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH----HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHL----LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~----~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      ++++.+.......  +.+.+++...++.++++.    .+..++.+++++++.+++.+.|++   . |+.+..+..+.+++
T Consensus       251 ~~~~~l~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~  324 (385)
T 1b5p_A          251 EVIKAMASVSRQS--TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA---L-GLKAVRPSGAFYVL  324 (385)
T ss_dssp             HHHHHHHHHHHTT--TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-TCCBCCCSBTTEEE
T ss_pred             HHHHHHHHHHhhc--cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHH---C-CCeecCCCeeEEEE
Confidence            9888876532222  223467777777777753    222245678888899999999988   3 66665444556677


Q ss_pred             EEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        378 LYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       378 i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      +.+.. ..       ...++.+.|.++||.+.++..+     ...+++||++.  +++++++++++.|+++++
T Consensus       325 ~~~~~~~~-------~~~~l~~~l~~~gv~v~~g~~f-----~~~~~iRis~~--~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          325 MDTSPIAP-------DEVRAAERLLEAGVAVVPGTDF-----AAFGHVRLSYA--TSEENLRKALERFARVLG  383 (385)
T ss_dssp             EECTTTCS-------SHHHHHHHHHHTTEECEESGGG-----TCTTEEEEECC--SCHHHHHHHHHHGGGGC-
T ss_pred             EecCCCCC-------CHHHHHHHHHHCCeEEeccccc-----CCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            66642 12       3457888999999999887543     12579999987  789999999999887654

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.98  E-value=9.2e-31  Score=263.41  Aligned_cols=346  Identities=14%  Similarity=0.122  Sum_probs=245.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      .|+++|||+.+.+ ++..++.+.+++.+++++.+..  .+....|..++..++++.+.+.+|.    +.++++++|++|+
T Consensus        55 ~~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al  131 (447)
T 3b46_A           55 QGRELINLGQGFF-SYSPPQFAIKEAQKALDIPMVN--QYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI  131 (447)
T ss_dssp             TTSCCEECCCCSC-SSCCCHHHHHHHHHHTTSGGGG--SCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred             cCCCeEEccCCCC-CCCCCHHHHHHHHHHHhCcCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence            4678999988754 5567899999999998763221  1222234556666666666655563    4677888889999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----------------CCHHHHHHHHHhhchhcccCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----------------NNMQHLEELLRQQDERDTLNSKV  216 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----------------~d~~~le~~l~~~~~~~~~~~~~  216 (457)
                      ..++++++++||.|++..++|..+...++..|.++..++.                 .|+++|++.+.           +
T Consensus       132 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~  200 (447)
T 3b46_A          132 LSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAIT-----------S  200 (447)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCC-----------T
T ss_pred             HHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhc-----------c
Confidence            9999999999999999999999888888999988776542                 36777777663           2


Q ss_pred             ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccc-cCCCCCCccEEEecCcccccC
Q psy15447        217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEY-FGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~-~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      ++++|++++++||+|.+.+   +++|+++|++||+++|+||+|+.+.++.....+... .+  ..+.|++++|+||++|+
T Consensus       201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~--~~~~~i~i~S~sK~~~~  278 (447)
T 3b46_A          201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPE--IGQLTLTVGSAGKSFAA  278 (447)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHH--HHTTEEEEEEHHHHTTC
T ss_pred             CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCC--CCCcEEEEecCchhcCC
Confidence            4578888899999999976   889999999999999999999876554211122111 01  12458999999999986


Q ss_pred             cc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--h-CcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        293 VG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--A-NPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       293 ~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      +|   ||+++ ++++++.+........+  +.+++.++++.++|+...  + .++++++++++.+++.+.|++    .|+
T Consensus       279 ~G~riG~~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~  352 (447)
T 3b46_A          279 TGWRIGWVLSLNAELLSYAAKAHTRICF--ASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDE----LGL  352 (447)
T ss_dssp             TTSCCEEEECSCHHHHHHHHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH----HTC
T ss_pred             cchhhEEEEeCCHHHHHHHHHHHhhccC--CCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHH----CCC
Confidence            65   99999 99998887653322233  347777777778887642  2 245778889999999999988    467


Q ss_pred             EEeccCCCCeEEEEecCCcch-H-------HHHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDE-V-------ASKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTE  434 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~-~-------~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~  434 (457)
                      .+..+..+.++++.+...... .       .......+++++|. ++||.+.++..+....  ....+++||+++.  ++
T Consensus       353 ~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~--~~  430 (447)
T 3b46_A          353 PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK--DD  430 (447)
T ss_dssp             CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS--CH
T ss_pred             eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC--CH
Confidence            666555677888887542000 0       00004457888887 5799998865321100  0125799999974  89


Q ss_pred             HHHHHHHHHHHHH
Q psy15447        435 QDMNSLIETLCKS  447 (457)
Q Consensus       435 edi~~~~~~l~~~  447 (457)
                      +++++++++|+++
T Consensus       431 e~l~~~~~~l~~~  443 (447)
T 3b46_A          431 AYLENAVERLKLL  443 (447)
T ss_dssp             HHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998763

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.98  E-value=4.9e-31  Score=264.25  Aligned_cols=338  Identities=13%  Similarity=0.099  Sum_probs=237.4

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----CC--CcEEEecccH
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----GL--EETALYSFGF  150 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~~~i~~~sG~  150 (457)
                      .+|+++|||+++++. +..+|.+.+++.+++.+++......  .|+......+|++.+++++    +.  +.++++++++
T Consensus        53 ~~~~~~i~l~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~  129 (432)
T 3ei9_A           53 YPDAQVISLGIGDTT-EPIPEVITSAMAKKAHELSTIEGYS--GYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK  129 (432)
T ss_dssp             CTTCCCEECSSCCCC-SCCCHHHHHHHHHHHHHTTSTTTCC--CCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHH
T ss_pred             CCCCCeEEccCCCCC-CCCCHHHHHHHHHHHhcccccCCcc--CCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChH
Confidence            367899999998876 6778999999999999865422211  2233334567777777775    43  3445555555


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCC------------eEEEecCCCHHHHHHHHHhhchhcccCCCCcc
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRC------------KVQYFKHNNMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~------------~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      +++.. +.+++++||.|+++.+.|.++...++..+.            ++..++.++.+.+...+++.         +++
T Consensus       130 ~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~  199 (432)
T 3ei9_A          130 CDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTV---------GRT  199 (432)
T ss_dssp             HHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGGC---------CCC
T ss_pred             HHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhhC---------CCC
Confidence            66654 677889999999999999999888877773            46666654322221112211         345


Q ss_pred             EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447        219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      ++|++++++||+|.+.+   +++|+++|++||+++|+||+|+.+.++..+..+....+.  .+.+|+++|+||++|..| 
T Consensus       200 ~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~  277 (432)
T 3ei9_A          200 DIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGA--EEVAMETASFSNYAGFTGV  277 (432)
T ss_dssp             SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTG--GGTEEEEEESHHHHCTTTT
T ss_pred             CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCC--CCeEEEEecchhccCCccc
Confidence            67777789999999987   667888899999999999999876666443333333222  245799999999998777 


Q ss_pred             --cEEEecHHH--------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH--HhhCcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        295 --GFCVGSSYI--------IEHHRLSGSGYCFSASLPPFLAVAANKALHL--LKANPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       295 --G~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~--~~~~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                        ||+++++++        ++.+..... ..+ .+.++++++++.+++..  .+..++++++++++.+++.+.|++    
T Consensus       278 r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  351 (432)
T 3ei9_A          278 RLGWTVIPKKLLYSDGFPVAKDFNRIIC-TCF-NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTS----  351 (432)
T ss_dssp             CCEEEECCTTCBCTTSCBHHHHHHHHHH-HSC-CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             ceEEEEEChHHhhcchHHHHHHHHHHhc-ccc-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence              999998877        565543221 112 23577777777777632  222345788899999999999988    


Q ss_pred             CCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447        363 QRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       363 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      .|+.+..+..++++++.++..        ...++++.|+++ ||++.++..+.   +.+.+++||++  ..+++++++++
T Consensus       352 ~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ll~~~gv~v~~g~~f~---~~~~~~iRis~--~~~~e~l~~~l  418 (432)
T 3ei9_A          352 LGYDVYGGKNAPYVWVHFPNQ--------SSWDVFAEILEKTHVVTTPGSGFG---PGGEGFVRVSA--FGHRENILEAC  418 (432)
T ss_dssp             TTCCEEECSSSSEEEEECTTS--------CHHHHHHHHHHHHCEECEEGGGGC---GGGTTEEEEEC--CSCHHHHHHHH
T ss_pred             CCceecCCCcceEEEEECCCC--------CHHHHHHHHHHHCCEEEeCchHhC---CCCCCEEEEEe--cCCHHHHHHHH
Confidence            477776555788888888732        345677777765 99998876542   22368999997  35999999999


Q ss_pred             HHHHHHH
Q psy15447        442 ETLCKSH  448 (457)
Q Consensus       442 ~~l~~~~  448 (457)
                      +.|++--
T Consensus       419 ~rl~~~~  425 (432)
T 3ei9_A          419 RRFKQLY  425 (432)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998754

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.98  E-value=1.5e-31  Score=262.27  Aligned_cols=325  Identities=11%  Similarity=0.108  Sum_probs=238.6

Q ss_pred             CChhhHHHHHHHHHhcCC-CCC-CCCCcccChHHHHHHHHH-HHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         95 ENPDIEKCAIDCIDKNGV-GSC-GPRGFYGTNVVHLDLEND-IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~-~~~-~~~~~~g~~~~~~~l~~~-la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      .+|++.+++.+++..... .++ .+...++..+...++++. +++++|.+.++++++|++|+..++.+++++||.|++..
T Consensus        21 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~  100 (371)
T 2e7j_A           21 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDE  100 (371)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEET
T ss_pred             CCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEcc
Confidence            468999999988876421 011 122234456778999999 99999988445555668999999999999999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEec--CC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFAIQTGLIASRCKVQYFK--HN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~--~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +.|.+....++..|.++..++  .+     |++++++.+++...      .+++++|++++++|++|.+.|+++|+++|+
T Consensus       101 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~v~~~~~~nptG~~~~~~~i~~~~~  174 (371)
T 2e7j_A          101 NCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKK------RGEVVLALITYPDGNYGNLPDVKKIAKVCS  174 (371)
T ss_dssp             TCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT------TSCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             CcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc------cCCeEEEEEECCCCCCcccCCHHHHHHHHH
Confidence            999999999999999999888  65     89999999975421      035678999999999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHH-HHhhCCccee-----
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEH-HRLSGSGYCF-----  316 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~-~~~~~~~~~~-----  316 (457)
                      +||+++|+||+|+.|..+.   . ...+     ++|++++|++|++++  ++|++++++++++. ++....++..     
T Consensus       175 ~~~~~li~D~a~~~~~~~~---~-~~~~-----~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (371)
T 2e7j_A          175 EYDVPLLVNGAYAIGRMPV---S-LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELL  245 (371)
T ss_dssp             TTTCCEEEECTTTBTTBCC---C-HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGT
T ss_pred             HcCCeEEEECccccCCCCC---C-hhhc-----CCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcccccccc
Confidence            9999999999998765431   1 1112     247999999999864  34899999887776 5433322222     


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhCcHHHHHH--HHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCcchHHHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKANPSLLTKL--REKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l--~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      +++.++..++++.++++.+..  +..+++  +++++++.+.|++   . ++.+..+.  .++++++.++          .
T Consensus       246 ~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~---~-~~~~~~~~~~~~~~~~~~~~----------~  309 (371)
T 2e7j_A          246 GCTARGATIITLMASFPHVRE--RIKRWDEEVEKARRFAAEMEK---L-GIKQLGDNPHNHDLMFFHAE----------V  309 (371)
T ss_dssp             TCCCCSHHHHHHHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHH---T-TCEEESSSSCCSSEEEEECH----------H
T ss_pred             cCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH---c-CcEEecCCCccCceEEEECC----------C
Confidence            445677777777788887765  466788  8999999999988   3 77776443  4778888765          1


Q ss_pred             HHHHHHHHHHcCeeEeccccCccc-cCCCCCeEE-EEecCC-CCHHHHHHHHHHHHHHHHHh
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQE-AKKQKPSIR-ITCNIS-HTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~~~lR-i~~~~~-~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..++.+.|.++||.+.+ ..+... ....++.+| ++++.. +|++|+++++++|+++++++
T Consensus       310 ~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          310 LYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY  370 (371)
T ss_dssp             HHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence            34688888888999876 321100 001157899 999987 89999999999999988754

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.98  E-value=1.9e-30  Score=257.61  Aligned_cols=332  Identities=11%  Similarity=0.054  Sum_probs=242.7

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCccc--ChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYG--TNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      +..|+|+.++.    ..+|++.+++.+++.++...+. ....++  ..+...++++.+++++|.+  .++++++|++++.
T Consensus        26 ~~~~ld~~~~~----~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~  100 (406)
T 3cai_A           26 GWVHFDAPAGM----LIPDSVATTVSTAFRRSGASTV-GAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLS  100 (406)
T ss_dssp             SCEECBGGGCC----CCCHHHHHHHHHHHHHCCSSSC-SSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred             CeEEEeCCCcC----CCCHHHHHHHHHHHHhcCCCCC-CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHH
Confidence            35677776653    3478999999999987532221 111121  3567889999999999975  5677778888999


Q ss_pred             HHHHhh---cCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        155 SAIAAY---VKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       155 ~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++.++   .++||.|++..+.|.+....+..    .|.++..++.+      |++++++.++           +++++|
T Consensus       101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~-----------~~~~~v  169 (406)
T 3cai_A          101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS-----------KSTRLV  169 (406)
T ss_dssp             HHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC-----------TTEEEE
T ss_pred             HHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC-----------CCceEE
Confidence            888877   78999999999998876555443    58888888765      7888888774           246789


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCccc-EEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG-FCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG-~v~~~  300 (457)
                      ++++++|++|.+.|+++|.++|++||+++|+||+|+.|....   . ...+     ++|+++.|++|.+|+.+| +++++
T Consensus       170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~---~-~~~~-----~~d~~~~s~~K~~g~~~G~~~~~~  240 (406)
T 3cai_A          170 AVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLL---D-IRET-----DADVVTVNAHAWGGPPIGAMVFRD  240 (406)
T ss_dssp             EEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCC---C-HHHH-----CCSEEEEEGGGGTSCSCEEEEESC
T ss_pred             EEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCC---C-chhc-----CCCEEEeehhhhcCCCcCeEEEEe
Confidence            999999999999999999999999999999999998654321   1 1112     348999999999886678 99999


Q ss_pred             HHHHHHHHhhCCcc------ee-cCCCcHHHHHHHHHHHHHHhh----------------CcHHHHHHHHHHHHHHHHhh
Q psy15447        301 SYIIEHHRLSGSGY------CF-SASLPPFLAVAANKALHLLKA----------------NPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       301 ~~~~~~~~~~~~~~------~~-~~~~~~~~~aaa~a~l~~~~~----------------~~~~~~~l~~~~~~l~~~L~  357 (457)
                      +++++.++.....+      .+ .++.++..++++.++++.+.+                .++++++++++++++.+.|+
T Consensus       241 ~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  320 (406)
T 3cai_A          241 PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLR  320 (406)
T ss_dssp             HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence            98877664322100      11 234577777777778877654                24567788899999999998


Q ss_pred             cccccCCeEEeccC--CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----ccCCCCCeEEEEecCC
Q psy15447        358 QHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----EAKKQKPSIRITCNIS  431 (457)
Q Consensus       358 ~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----~~~~~~~~lRi~~~~~  431 (457)
                      +   ++++.+..+.  .++++++.+.. .       ...++.+.|.++||.++++..+..    ..+...+++|++++..
T Consensus       321 ~---~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~  389 (406)
T 3cai_A          321 S---LPLVMLIGRPEAQIPVVSFAVHK-V-------PADRVVQRLADNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHY  389 (406)
T ss_dssp             T---CTTEEECCCCSSBCSEEEEEETT-B-------CHHHHHHHHHHTTEECEECCSCHHHHHHTTTTTTCCEEEECCTT
T ss_pred             c---CCCeEEcCCccccCCEEEEEECC-c-------CHHHHHHHHHHCCcEEecCChHHHHHHcCCCCCCCeEEEEeecC
Confidence            8   5678775432  35677777753 2       345788899999999987541100    0011247899999999


Q ss_pred             CCHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCK  446 (457)
Q Consensus       432 ~t~edi~~~~~~l~~  446 (457)
                      +|++|+++++++|++
T Consensus       390 ~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          390 STMAEVDQLVRALAS  404 (406)
T ss_dssp             CCHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHH
Confidence            999999999999875

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.97  E-value=3.6e-30  Score=253.00  Aligned_cols=334  Identities=14%  Similarity=0.121  Sum_probs=240.0

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA  158 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~  158 (457)
                      |+|++++.    ..+|.+.+++.+++.+....+. .+...++..+...++++++++++|.+  .++++++|++|+..++.
T Consensus         3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~   78 (382)
T 4hvk_A            3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII   78 (382)
T ss_dssp             BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHH
T ss_pred             eecCCCcC----CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHH
Confidence            55665532    2478999999999987322111 12122344677889999999999975  46777788899999999


Q ss_pred             hhc----CCCCEEEEeCcccHHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        159 AYV----KRNDAVFVDENINFAIQTGLIA---SRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       159 a~~----~~gd~v~~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ++.    ++||.|+++.+.|+++...+..   .|.++..++.+     |++++++.+++           ++++|+++++
T Consensus        79 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~  147 (382)
T 4hvk_A           79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-----------DTILVSVQHA  147 (382)
T ss_dssp             HHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEEEECCSB
T ss_pred             HhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc-----------CceEEEEECC
Confidence            887    9999999999999988776554   58888888754     78999888743           4579999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE  305 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~  305 (457)
                      +|++|.+.|+++|.++|++||+ +|+||+|++|....         +....++|+++.|++|.+|+.| |+++.+++.  
T Consensus       148 ~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--  215 (382)
T 4hvk_A          148 NNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEV---------DVEKIGADMLTISSNDIYGPKGVGALWIRKEA--  215 (382)
T ss_dssp             CTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCC---------CHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--
T ss_pred             CCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCC---------CchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--
Confidence            9999999999999999999999 99999998654321         1111134899999999887654 777776553  


Q ss_pred             HHHhhCCc----c-eecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeE
Q psy15447        306 HHRLSGSG----Y-CFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLK  376 (457)
Q Consensus       306 ~~~~~~~~----~-~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~  376 (457)
                      .++....+    . ...++.++..+++..++++.+.+. ++.+++++++.+++.+.|++   ++++.+..+..   ..++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~  292 (382)
T 4hvk_A          216 KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK---IEESYLNGHPEKRLPNNV  292 (382)
T ss_dssp             CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEECSCSSSBCTTEE
T ss_pred             CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCccccCCCEE
Confidence            11111100    0 113345777777777777765432 46788899999999999987   56887764332   3466


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC---------C-----CCCeEEEEecCCCCHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK---------K-----QKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~---------~-----~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                      .+.+...        ...++.+.|.++||.++++.++.....         .     ..+++|++++..+|++|++++++
T Consensus       293 ~~~~~~~--------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~  364 (382)
T 4hvk_A          293 NVRFSYI--------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE  364 (382)
T ss_dssp             EEEETTC--------CHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHH
T ss_pred             EEEECCC--------CHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHH
Confidence            6666543        345788999999999987654322000         0     04789999999999999999999


Q ss_pred             HHHHHHHHhcC
Q psy15447        443 TLCKSHDIAVQ  453 (457)
Q Consensus       443 ~l~~~~~~~~~  453 (457)
                      +|+++++++.+
T Consensus       365 ~l~~~~~~~~~  375 (382)
T 4hvk_A          365 VLPGVIERLRS  375 (382)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999887653

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.97  E-value=2.1e-30  Score=253.30  Aligned_cols=324  Identities=13%  Similarity=0.134  Sum_probs=237.0

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASA  156 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~a  156 (457)
                      +++||..+ +..  .+|++.+++.+++   +.  ..+   ....+...++++++++++|.+    .++++++|++|+..+
T Consensus         4 ~~~~~~~g-p~~--~~~~v~~a~~~~~---~~--~~~---~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~   72 (366)
T 1m32_A            4 NYLLLTPG-PLT--TSRTVKEAMLFDS---CT--WDD---DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAV   72 (366)
T ss_dssp             -CEECSSS-SCC--CCHHHHHTTCCCC---CT--TSH---HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHH
T ss_pred             ccccccCC-CcC--CCHHHHHHHhhhh---cC--CCH---HHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHH
Confidence            46777765 322  5788888887642   21  100   001256789999999999943    478888999999999


Q ss_pred             HHhhcCCCCEEE-EeCcccHHH-HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        157 IAAYVKRNDAVF-VDENINFAI-QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       157 i~a~~~~gd~v~-~~~~~h~~~-~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      +.+++++||.|+ .+.++|++. ...+...|.++..++.     .|++++++.+++.         .++++|++.+++||
T Consensus        73 ~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~np  143 (366)
T 1m32_A           73 LGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNAD---------PTISHIAMVHSETT  143 (366)
T ss_dssp             HHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHC---------TTCCEEEEESEETT
T ss_pred             HHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC---------CCeEEEEEecccCC
Confidence            999999998655 556888763 4555667877776653     5899999998752         13467778888899


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHH  307 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~  307 (457)
                      +|.+.|+++|+++|++||+++|+||+|++|..+         .++...++|+++.|++|++ |+.| |++++++++++.+
T Consensus       144 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~  214 (366)
T 1m32_A          144 TGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP---------MDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAAC  214 (366)
T ss_dssp             TTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTC
T ss_pred             cceecCHHHHHHHHHHcCCEEEEECCccccCcC---------ccccccCccEEEecCcccccCCCceEEEEECHHHHHhh
Confidence            999999999999999999999999999876432         1222224589999999988 5556 9999999887765


Q ss_pred             HhhCCccee----------------cCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        308 RLSGSGYCF----------------SASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       308 ~~~~~~~~~----------------~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      +....++.+                ..+.++..++++.++++.+.+.   ++++++++++.+++.+.|++    .++.+.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~----~~~~~~  290 (366)
T 1m32_A          215 KGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRA----LGFNTL  290 (366)
T ss_dssp             TTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH----TTCCBS
T ss_pred             cCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHH----CCCeec
Confidence            432111111                1356788888888888876542   45788999999999999988    366554


Q ss_pred             cc---CCCCeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHH
Q psy15447        369 GH---RDTPLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIET  443 (457)
Q Consensus       369 ~~---~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~  443 (457)
                      .+   ..+.++++.++.  ..       ...++.+.|.++||.+.++..+      ..+++|++++..+|++|+++++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~------~~~~iRi~~~~~~~~~~i~~~~~~  357 (366)
T 1m32_A          291 LDDELHSPIITAFYSPEDPQY-------RFSEFYRRLKEQGFVIYPGKVS------QSDCFRIGNIGEVYAADITALLTA  357 (366)
T ss_dssp             SCGGGBCSSEEEEECCCCTTC-------CHHHHHHHHHHTTEECEECCCS------SSCEEEEECCSSCCHHHHHHHHHH
T ss_pred             cCchhcCceEEEEEcCccCCC-------CHHHHHHHHHHCCEEEECCcCC------CCCEEEEecCCCCCHHHHHHHHHH
Confidence            33   134478887764  22       3467899999999999876532      357999999999999999999999


Q ss_pred             HHHHHHH
Q psy15447        444 LCKSHDI  450 (457)
Q Consensus       444 l~~~~~~  450 (457)
                      |++++++
T Consensus       358 l~~~~~~  364 (366)
T 1m32_A          358 IRTAMYW  364 (366)
T ss_dssp             HHHHCTT
T ss_pred             HHHHHHh
Confidence            9987654

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.97  E-value=2.2e-30  Score=258.58  Aligned_cols=337  Identities=16%  Similarity=0.147  Sum_probs=243.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHH--h-cCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCID--K-NGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS  153 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~--~-~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~  153 (457)
                      .-|+|+.++.    ..+|++.+++.+++.  + ++.... .+...++..+...++++.+++++|.+  .++++++|++|+
T Consensus        23 ~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~   98 (423)
T 3lvm_A           23 PIYLDYSATT----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESD   98 (423)
T ss_dssp             SEECBTTTCC----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHH
T ss_pred             CEeecCCCcC----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHH
Confidence            4455555432    247899999998887  3 222111 12222345677889999999999976  788889999999


Q ss_pred             HHHHHhhcC----CCCEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        154 ASAIAAYVK----RNDAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       154 ~~ai~a~~~----~gd~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      ..+++++.+    +||.|++..+.|.++...+   ...|.++..++.+     |++++++.+++           ++++|
T Consensus        99 ~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v  167 (423)
T 3lvm_A           99 NLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRD-----------DTILV  167 (423)
T ss_dssp             HHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCT-----------TEEEE
T ss_pred             HHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCC-----------CcEEE
Confidence            999988773    7999999999999887766   4458898888765     78999888753           45799


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~  300 (457)
                      ++++++|++|.+.|+++|+++|++||++||+||+|++|...         .+....++|+++.|++|.+|+.| |+++++
T Consensus       168 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~---------~~~~~~~~di~~~s~sK~~g~~g~G~~~~~  238 (423)
T 3lvm_A          168 SIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLP---------IDLSQLKVDLMSFSGHKIYGPKGIGALYVR  238 (423)
T ss_dssp             ECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTSCCSEEEEESTTTTSCSSCEEEEEC
T ss_pred             EEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------cChhhcCCCEEEechHHhcCCCCeEEEEEe
Confidence            99999999999999999999999999999999999865432         11111245899999999887654 888888


Q ss_pred             HHHHHHHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC--
Q psy15447        301 SYIIEHHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD--  372 (457)
Q Consensus       301 ~~~~~~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~--  372 (457)
                      ++.++.+.....+     ....++.++..++++.++++.+.+. +++.++++++.+++.+.|++   ++++.+..+..  
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~  315 (423)
T 3lvm_A          239 RKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD---IEEVYLNGDLEHG  315 (423)
T ss_dssp             BTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEEESCSTTB
T ss_pred             ccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCcccc
Confidence            7655544322111     0123345777777777777766542 46788899999999999988   56888765433  


Q ss_pred             -CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------cCC----CCCeEEEEecCCCCHHHH
Q psy15447        373 -TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------AKK----QKPSIRITCNISHTEQDM  437 (457)
Q Consensus       373 -~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~~----~~~~lRi~~~~~~t~edi  437 (457)
                       ..++.+.+...        ...++.+.|.+  |.+.++.++...          ...    ..+.+|++++..+|++|+
T Consensus       316 ~~~~~~~~~~~~--------~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i  385 (423)
T 3lvm_A          316 APNILNVSFNYV--------EGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI  385 (423)
T ss_dssp             CTTEEEEEETTS--------CHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHH
T ss_pred             CCCeEEEEeCCC--------CHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHH
Confidence             35666666432        34567777766  777765432210          000    037899999999999999


Q ss_pred             HHHHHHHHHHHHHhcC
Q psy15447        438 NSLIETLCKSHDIAVQ  453 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~~  453 (457)
                      ++++++|+++++++++
T Consensus       386 ~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          386 DYTIELVRKSIGRLRD  401 (423)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            9999999999987754

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.97  E-value=4.4e-30  Score=253.93  Aligned_cols=323  Identities=12%  Similarity=0.095  Sum_probs=241.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSAS  155 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~  155 (457)
                      ++.|+|..+..    ..+|++.+++.+++..   .+  +   ....+...++++.+++++|.+   .++++++|++|+..
T Consensus        33 ~~~~l~~~~~~----~~~~~v~~a~~~~~~~---~~--~---~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~  100 (393)
T 1vjo_A           33 PSRLLLGPGPS----NAHPSVLQAMNVSPVG---HL--D---PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEA  100 (393)
T ss_dssp             CCCEECSSSCC----CCCHHHHHHHSSCCCC---TT--S---HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHH
T ss_pred             ccceeccCCCC----CCCHHHHHHHhccccc---cc--C---HHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHH
Confidence            35566654421    2367888887766542   11  0   113577889999999999965   46777888999999


Q ss_pred             HHHhhcCCCCEEEEeCcccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        156 AIAAYVKRNDAVFVDENINFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                      ++.+++++||.|++..+.|.+  +...++..|.++..++.     .|++++++.+++.          ++++|++++++|
T Consensus       101 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~n  170 (393)
T 1vjo_A          101 TIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETH----------RPAILALVHAET  170 (393)
T ss_dssp             HHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEET
T ss_pred             HHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhC----------CceEEEEeccCC
Confidence            999999999999999999888  77778888998888773     5899999988641          346888999999


Q ss_pred             CCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHH
Q psy15447        229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEH  306 (457)
Q Consensus       229 ~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~  306 (457)
                      ++|.+.|+++|+++|++||+++|+||+|++|...         ..+...++|+++.|++|++++++  |++++++++++.
T Consensus       171 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~---------~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~  241 (393)
T 1vjo_A          171 STGARQPLEGVGELCREFGTLLLVDTVTSLGGVP---------IFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEK  241 (393)
T ss_dssp             TTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHH
T ss_pred             CcceeccHHHHHHHHHHcCCEEEEECCccccCcC---------CcccccCccEEEEcCcccccCCCceEEEEECHHHHHH
Confidence            9999999999999999999999999999865321         11222355899999999996544  899999998887


Q ss_pred             HHhh---CCcc--------------eecC-CCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeE
Q psy15447        307 HRLS---GSGY--------------CFSA-SLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFL  366 (457)
Q Consensus       307 ~~~~---~~~~--------------~~~~-~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~  366 (457)
                      ++..   ..++              .+.. +.++..++++.++++.+.+.  ++++++++++.+++.+.|++    .|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~  317 (393)
T 1vjo_A          242 LQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLED----IGLS  317 (393)
T ss_dssp             HHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCC
T ss_pred             HhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH----cCCc
Confidence            7532   0111              1222 56888888888888876432  46788999999999999988    3666


Q ss_pred             EeccCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHH
Q psy15447        367 VQGHRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLI  441 (457)
Q Consensus       367 ~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~  441 (457)
                      +..+..   ..++++.++...       ...++.+.|.++ ||.+.++..+     ...+++|+++ +...+++++++++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRis~~~~~~~~~~i~~~~  385 (393)
T 1vjo_A          318 LHVEKEYRLPTLTTVCIPDGV-------DGKAVARRLLNEHNIEVGGGLGE-----LAGKVWRVGLMGFNSRKESVDQLI  385 (393)
T ss_dssp             BSSCGGGBCSSEEEEECCTTC-------CHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGGCSHHHHHHHH
T ss_pred             ccCCccccCCcEEEEEcCCCC-------CHHHHHHHHHhhCCEEEecCccc-----cCCCEEEEeCCccCChHHHHHHHH
Confidence            643322   356777765333       345788999988 9999877642     2357999995 5566888999999


Q ss_pred             HHHHHHH
Q psy15447        442 ETLCKSH  448 (457)
Q Consensus       442 ~~l~~~~  448 (457)
                      ++|++++
T Consensus       386 ~~l~~~l  392 (393)
T 1vjo_A          386 PALEQVL  392 (393)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9998875

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.97  E-value=2.8e-30  Score=255.14  Aligned_cols=317  Identities=12%  Similarity=0.049  Sum_probs=233.4

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCC---------
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKR---------  163 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~---------  163 (457)
                      .+|++.+++.+++.+....+.   ...+..+...++++++++++|.+  .++++++|++|+..++.++..+         
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~  118 (397)
T 3f9t_A           42 VLPITRKIVDIFLETNLGDPG---LFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGL  118 (397)
T ss_dssp             CCTHHHHHHHHHTTCCTTSGG---GBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcHHHHHHHHHHHhhcCCCcc---cChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc
Confidence            468999999998875322211   12256778889999999999865  4488889999999999988765         


Q ss_pred             ----CCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        164 ----NDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       164 ----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                          ||.|+++.++|.++...++..|.++..++.+     |++++++.+++.          ++++|++++++|++|.+.
T Consensus       119 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~  188 (397)
T 3f9t_A          119 SKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDYTIDEKFVKDAVEDY----------DVDGIIGIAGTTELGTID  188 (397)
T ss_dssp             CCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTSSBCHHHHHHHHHHS----------CCCEEEEEBSCTTTCCBC
T ss_pred             cCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCCcCCHHHHHHHHhhc----------CCeEEEEECCCCCCCCCC
Confidence                9999999999999999999999999988876     899999998751          346888888999999999


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-----cccCCCCCCccEEEecCcccccC--cccEEEe-cHHHHHH
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-----EYFGVSTEEVDMIIGSLEHALGS--VGGFCVG-SSYIIEH  306 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-----~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~-~~~~~~~  306 (457)
                      |+++|+++|++||+++|+||+|+.+.++..+.+..     ..++... ++|+++.|++|++++  ..|+++. ++.+.+.
T Consensus       189 ~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~  267 (397)
T 3f9t_A          189 NIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYKRY  267 (397)
T ss_dssp             CHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGGGG
T ss_pred             CHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHHHh
Confidence            99999999999999999999998776654443110     1122222 568999999999843  2355544 5555544


Q ss_pred             HHhhCCcceec-------CC---CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        307 HRLSGSGYCFS-------AS---LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       307 ~~~~~~~~~~~-------~~---~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      ++.. ..+...       ++   .++..++++++.+... ..++..++++++.+++.+.|++    .++.+..++.++++
T Consensus       268 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~  341 (397)
T 3f9t_A          268 LDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLGRE-GQRKIVNECMENTLYLYKKLKE----NNFKPVIEPILNIV  341 (397)
T ss_dssp             TCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCCSSSEE
T ss_pred             hccC-CccccCCCccccccccccchHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHH----CCCEEEcCCCccEE
Confidence            4221 112111       11   1444444444444321 1245778888999999999998    37765556667777


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ++.+..          ..++.+.|.++||.+.+...        ++++|++++..+|++|+++++++|+++++
T Consensus       342 ~~~~~~----------~~~~~~~l~~~gi~v~~~~~--------~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          342 AIEDED----------YKEVCKKLRDRGIYVSVCNC--------VKALRIVVMPHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             EEECTT----------HHHHHHHHHHTTCBCEECSS--------SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred             EEEeCC----------HHHHHHHHHhCCeEEeccCC--------CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence            776543          34788999999999887653        47999999999999999999999998764

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.97  E-value=4.7e-30  Score=253.25  Aligned_cols=312  Identities=13%  Similarity=0.114  Sum_probs=233.2

Q ss_pred             ChhhHHHHHHHHHhcCC-CCCCCCCcccC-hHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhh-cCCCCEEEEe
Q psy15447         96 NPDIEKCAIDCIDKNGV-GSCGPRGFYGT-NVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAY-VKRNDAVFVD  170 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~-~~~~~~~~~g~-~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~  170 (457)
                      ++++.+++.+++.+... ++..+. .|.. .+...++++.+++++|.+  .++++++|++|+..++.++ .++||.|++.
T Consensus        29 ~~~v~~a~~~~~~~~~~~~~~~~~-~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~  107 (390)
T 1elu_A           29 PTVALEAITAMYGYLQENGPFSIA-ANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLT  107 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHCSSSHH-HHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHHhccCCcchh-hHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEe
Confidence            57899999999986421 111000 1211 367889999999999966  6788889999999999999 8999999999


Q ss_pred             CcccHHHHHH----HHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        171 ENINFAIQTG----LIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       171 ~~~h~~~~~~----~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      .+.|.+....    .+..|.++..++.+       |++++++.++           +++++|++++++|++|.+.|+++|
T Consensus       108 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~~~~nptG~~~~~~~i  176 (390)
T 1elu_A          108 DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLG-----------PKTRLVILSHLLWNTGQVLPLAEI  176 (390)
T ss_dssp             TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCC-----------TTEEEEEEESBCTTTCCBCCHHHH
T ss_pred             cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcC-----------CCceEEEEeccccCCceecCHHHH
Confidence            9999887654    35668888888763       4666666553           246788999999999999999999


Q ss_pred             HHHHH----HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccc-ccCcc-cEEEecHHHHHHHHhhCC-
Q psy15447        240 LSLRS----KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA-LGSVG-GFCVGSSYIIEHHRLSGS-  312 (457)
Q Consensus       240 ~~l~~----~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~-lg~~g-G~v~~~~~~~~~~~~~~~-  312 (457)
                      +++|+    +||+++|+||+|++|..+         .++....+|+++.|++|+ +|+.| |++++++++++.+..... 
T Consensus       177 ~~l~~~~~~~~~~~li~Dea~~~g~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g  247 (390)
T 1elu_A          177 MAVCRRHQGNYPVRVLVDGAQSAGSLP---------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVG  247 (390)
T ss_dssp             HHHHHHCCSSSCCEEEEECTTTBTTBC---------CCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCC
T ss_pred             HHHHhhhhhhcCcEEEEEcccccCCcC---------CChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCcccc
Confidence            99999    999999999999875432         112123458999999994 45555 999999887776543211 


Q ss_pred             --------------------cceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447        313 --------------------GYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG  369 (457)
Q Consensus       313 --------------------~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~  369 (457)
                                          .+. .++.++..++++.++++.+.+   .++++++++++.+++.+.|++   .+|+.+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~  323 (390)
T 1elu_A          248 WRSITYGAKGEPTGWAEGGKRFE-VATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ---LPHVHCLA  323 (390)
T ss_dssp             TTTEEECTTSCEEEECSGGGGGC-CSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH---STTEEESC
T ss_pred             CCcccccccCcccccccchHhhC-CCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEec
Confidence                                111 234577777777777776644   245778899999999999988   45887764


Q ss_pred             c--CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        370 H--RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       370 ~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +  ..++++.+.++...       ...++.+.|.++||.+.++.        .++++||+++..+|++|+++++++|+++
T Consensus       324 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~--------~~~~iRis~~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          324 TSAPQAGLVSFTVDSPL-------GHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYITDEEEINHLLARLADF  388 (390)
T ss_dssp             SSCCSSSEEEEEECSSS-------CHHHHHHHHHHTTEECEEET--------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred             CccccccEEEEEcCCCC-------CHHHHHHHHHHCCEEEEecC--------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence            2  35777877775332       34578899999999998754        2478999999899999999999998753

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.97  E-value=1e-29  Score=252.68  Aligned_cols=345  Identities=12%  Similarity=0.055  Sum_probs=239.8

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----C-CcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----L-EETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~-~~~i~~~sG~~a~  153 (457)
                      +..+|||+.+.. .+..+|++.+++.+++.+...  .++....|..++..++++.+.+.+|    . +.++++++|++|+
T Consensus        22 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~   98 (410)
T 3e2y_A           22 DPSVVNLGQGFP-DISPPSYVKEELSKAAFIDNM--NQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSL   98 (410)
T ss_dssp             STTSEECSSCCC-CSCCCHHHHHHHHHHHTCGGG--GSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred             CCCeEEecCCCC-CCCCCHHHHHHHHHHHhCccc--cCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence            356899988763 666789999999999875311  1111112334444444444444333    2 5678888888999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----------------CHHHHHHHHHhhchhcccCCCCc
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----------------NMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----------------d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      ..++.+++++||.|++..++|..+...+...|.++..++.+                |++++++.++           ++
T Consensus        99 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~-----------~~  167 (410)
T 3e2y_A           99 FNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-----------SK  167 (410)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCC-----------TT
T ss_pred             HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcC-----------CC
Confidence            99999999999999999999998888889999888877653                7788877663           24


Q ss_pred             cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447        218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      +++|++++++||+|.+.+   +++|+++|++||+++|+||+|+.+.++.........+... .+.++++.|+||++|+.|
T Consensus       168 ~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~g~~G  246 (410)
T 3e2y_A          168 TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGM-WERTITIGSAGKTFSVTG  246 (410)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTC-GGGEEEEEEHHHHSSCGG
T ss_pred             ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCc-cCeEEEEecchhhcCCCC
Confidence            678888999999999964   8899999999999999999998655432111111122211 234688999999998655


Q ss_pred             ---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH--------hhCcHHHHHHHHHHHHHHHHhhcccccC
Q psy15447        295 ---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL--------KANPSLLTKLREKCNTMHSLLSQHKVTQ  363 (457)
Q Consensus       295 ---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~--------~~~~~~~~~l~~~~~~l~~~L~~~~~~~  363 (457)
                         ||+++++++++.+........+  +.+++.++++.++++..        +..++++++++++.+++.+.|++    .
T Consensus       247 ~r~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~  320 (410)
T 3e2y_A          247 WKLGWSIGPAHLIKHLQTVQQNSFY--TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNS----V  320 (410)
T ss_dssp             GCCEEEECCHHHHHHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHT----T
T ss_pred             ceEEEEEECHHHHHHHHHHHHhhcc--CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHH----C
Confidence               9999999998887654322223  34788888888887631        11135677888899999999988    4


Q ss_pred             CeEEeccCCCCeEEEEecCCcc-hHH---HHHHHHHHHHHHH-HcCeeEeccccCcccc--CCCCCeEEEEecCCCCHHH
Q psy15447        364 RFLVQGHRDTPLKYLYLQKSDD-EVA---SKKLLQTICDMCI-QAGFAITCPSHLDQEA--KKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       364 ~~~~~~~~~~~~~~i~~~~~~~-~~~---~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~~~lRi~~~~~~t~ed  436 (457)
                      |+.+..+..+.++++.+..... ...   ......+++++++ ++||++.++..+....  +...+++||+++.  |+++
T Consensus       321 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~  398 (410)
T 3e2y_A          321 GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK--KDST  398 (410)
T ss_dssp             TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC--CHHH
T ss_pred             CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC--CHHH
Confidence            7877666677788877653110 000   0001236666665 5699998876532100  0125799999764  9999


Q ss_pred             HHHHHHHHHH
Q psy15447        437 MNSLIETLCK  446 (457)
Q Consensus       437 i~~~~~~l~~  446 (457)
                      +++++++|++
T Consensus       399 l~~~l~~l~~  408 (410)
T 3e2y_A          399 LDAAEEIFRA  408 (410)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.97  E-value=3.9e-29  Score=243.34  Aligned_cols=330  Identities=12%  Similarity=0.053  Sum_probs=236.5

Q ss_pred             cCCCcEEE-ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEE
Q psy15447         69 QKSGYIVN-INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETAL  145 (457)
Q Consensus        69 ~~~g~~~~-~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~  145 (457)
                      .+.|.+++ .+|+++|||+++.. .++.+|++.+++.+++..+. .+.       .. ...++++++++++|.+  .+++
T Consensus         3 ~~~g~~~~~~~g~~~id~~~~~~-~~~~~~~v~~a~~~~~~~~~-~y~-------~~-~~~~lr~~la~~~~~~~~~i~~   72 (350)
T 3fkd_A            3 FGHGDEGITPLSSEIVNFSTTVW-TDGDKDHLEKHLVENLNCIR-HYP-------EP-DAGTLRQMLAKRNSVDNNAILV   72 (350)
T ss_dssp             -------------CCEECSCCSC-CCSCCHHHHHHHHHTGGGGG-SCC-------CT-TCHHHHHHHHHHTTCCGGGEEE
T ss_pred             ccccchHhhhccccEEEccCCCC-CCCCCHHHHHHHHHhHhHHh-cCC-------CC-cHHHHHHHHHHHhCcCHHHEEE
Confidence            45666777 69999999998743 34467999999998884321 111       11 1268999999999864  6778


Q ss_pred             ecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-CCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        146 YSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-NNMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       146 ~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      +++|++++..++.++.  ||.|+++.++|..+...++..|.++..++. ++.+.+..              +++++|+++
T Consensus        73 t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~--------------~~~~~v~i~  136 (350)
T 3fkd_A           73 TNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF--------------SNMDFCWLC  136 (350)
T ss_dssp             ESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC--------------TTCSEEEEE
T ss_pred             cCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc--------------CCCCEEEEe
Confidence            8888899999999888  999999999999999999999999999987 44332211              245677788


Q ss_pred             cCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        225 GVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       225 ~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +++||+|.+.|++++.++++.++ .++|+||+|+....  .+.......+  ..+.++++.|+||++|++|   ||++++
T Consensus       137 ~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~--~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~~~~~  212 (350)
T 3fkd_A          137 NPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT--EEVIRPADIK--GRKNLVMVYSFSHAYGIPGLRIGYIVAN  212 (350)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS--SCCCCGGGGT--TCSSEEEEEESHHHHSCGGGCCEEEECC
T ss_pred             CCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc--CcchhhHHhh--cCCCEEEEecCchhccCcchheEeEEeC
Confidence            99999999999999999998876 79999999975433  2222222222  2344688999999998555   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      +++++.++.....    .+.+++.++++.++++......+..++..++.+++.+.|++   .+++.+. ++.+.++++.+
T Consensus       213 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~-~~~~~~~~~~~  284 (350)
T 3fkd_A          213 KDFMKRVAAFSTP----WAVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNR---LDGVEVH-PSGTTFFLLRL  284 (350)
T ss_dssp             HHHHHHHHTTCCT----TCSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHH---STTEEEC-CCSSSEEEEEE
T ss_pred             HHHHHHHHHhCCC----CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEC-CCCCcEEEEEC
Confidence            9999988765432    24688888888888875442222334444889999999988   4688875 56677888877


Q ss_pred             cCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +..        ...++.+.|.+ +||.++++..+.   ....+++||+++   +++|+++++++|+++.++
T Consensus       285 ~~~--------~~~~l~~~L~~~~gi~v~~g~~f~---~~~~~~iRis~~---~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          285 KKG--------TAAELKKYMLEEYNMLIRDASNFR---GLDESYVRITTQ---RPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             SSS--------CHHHHHHHHHHTTCEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHHTC
T ss_pred             CCC--------CHHHHHHHHHHHCCEEEEeCccCC---CCCCCEEEEEcC---CHHHHHHHHHHHHHHHHH
Confidence            653        24578899999 899998876432   233679999986   899999999999887643

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.97  E-value=5.4e-30  Score=252.09  Aligned_cols=333  Identities=14%  Similarity=0.120  Sum_probs=240.0

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC-CCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG-PRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA  158 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~-~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~  158 (457)
                      |+|++++.    ..+|++++++.+++.+....+.. +....+..+...++++++++++|.+  .++++++|++|+..++.
T Consensus         3 yld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~   78 (382)
T 4eb5_A            3 YFDYTSAK----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAII   78 (382)
T ss_dssp             BCBTTTCC----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHH
T ss_pred             eeccCCCC----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHH
Confidence            56766642    24799999999999863211111 1111123567899999999999976  56777888999999999


Q ss_pred             hhc----CCCCEEEEeCcccHHHHHHHHh---cCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        159 AYV----KRNDAVFVDENINFAIQTGLIA---SRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       159 a~~----~~gd~v~~~~~~h~~~~~~~~~---~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ++.    ++||.|+++.+.|.++...+..   .|.++..++.     .|++++++.+++           ++++|+++++
T Consensus        79 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~  147 (382)
T 4eb5_A           79 GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD-----------DTILVSVQHA  147 (382)
T ss_dssp             HHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEEEECCSB
T ss_pred             HHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhcC-----------CCeEEEEecc
Confidence            987    8999999999999988776653   5888888775     378888887742           4578999999


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIE  305 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~  305 (457)
                      +||+|.+.|+++|.++|++||++ |+||+|++|...   ..+ ..+     ++|+++.|++|.+|..| |+++++++.  
T Consensus       148 ~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~---~~~-~~~-----~~di~~~s~sK~~g~~g~G~~~~~~~~--  215 (382)
T 4eb5_A          148 NNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIE---VDV-EKI-----GADMLTISSNDIYGPKGVGALWIRKEA--  215 (382)
T ss_dssp             CTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBC---CCH-HHH-----TCSEEEEETGGGTCCSSCEEEEEETTC--
T ss_pred             CCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcc---cCc-ccc-----CCCEEEeehHHhcCCCceEEEEEcccc--
Confidence            99999999999999999999999 999999865321   111 111     34899999999988654 787777653  


Q ss_pred             HHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC---CCeE
Q psy15447        306 HHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD---TPLK  376 (457)
Q Consensus       306 ~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~---~~~~  376 (457)
                      .++....+     ....++.++..++++.++++.+.+. ++++++++++++++.+.|++   ++++.+..+..   +.++
T Consensus       216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~  292 (382)
T 4eb5_A          216 KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK---IEESYLNGHPEKRLPNNV  292 (382)
T ss_dssp             CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTEEECSCSSSBCTTEE
T ss_pred             ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh---CCCeEEeCCcccCCCCEE
Confidence            11111110     0112335666666666777765432 45778889999999999988   46887764321   5577


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc----------C----CCCCeEEEEecCCCCHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA----------K----KQKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~----------~----~~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                      ++.++. .       ...++.+.|.++||.+.++.++....          .    ...+.+|++++..+|++|++++++
T Consensus       293 ~~~~~~-~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~  364 (382)
T 4eb5_A          293 NVRFSY-I-------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE  364 (382)
T ss_dssp             EEEETT-S-------CHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHH
T ss_pred             EEEeCC-c-------CHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHH
Confidence            777763 2       34578889999999998765422100          0    024789999998899999999999


Q ss_pred             HHHHHHHHhc
Q psy15447        443 TLCKSHDIAV  452 (457)
Q Consensus       443 ~l~~~~~~~~  452 (457)
                      +|++++++++
T Consensus       365 ~l~~~~~~~~  374 (382)
T 4eb5_A          365 VLPGVIERLR  374 (382)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999988765

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.97  E-value=2.3e-29  Score=250.18  Aligned_cols=316  Identities=10%  Similarity=0.097  Sum_probs=237.8

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc---EEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE---TALYSFGFSTSASAIAAYVKRNDAVFVDEN  172 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~  172 (457)
                      +|++.+++.+++    .++..    ....+...++++++++++|.+.   +++++||++|+..++.+++++||.|++..+
T Consensus        25 ~~~v~~a~~~~~----~~~~~----~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~   96 (411)
T 3nnk_A           25 DPRVLRAMSSQL----IGQYD----PAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVF   96 (411)
T ss_dssp             CHHHHHHHTSCC----CCTTC----HHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CHHHHHHhhccc----ccccc----HHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecC
Confidence            577777766543    11111    1124667899999999998653   355567899999999999999999999999


Q ss_pred             ccHH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447        173 INFA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK  245 (457)
Q Consensus       173 ~h~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~  245 (457)
                      .|.+  +...+...|.++..++.+     |++++++.+++.          ++++|++++++|++|.+.|+++|+++|++
T Consensus        97 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~  166 (411)
T 3nnk_A           97 GRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRI----------RPRLLLTVQGDTSTTMLQPLAELGEICRR  166 (411)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHHH
T ss_pred             CchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhC----------CCeEEEEeCCCCCcceeccHHHHHHHHHH
Confidence            8876  677788889998888765     899999998752          45688899999999999999999999999


Q ss_pred             cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhC------------
Q psy15447        246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSG------------  311 (457)
Q Consensus       246 ~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~------------  311 (457)
                      ||+++|+||++++|...         ++....++|+++.|++|++ |+.| |+++.++++++.++...            
T Consensus       167 ~~~~li~Dea~~~~~~~---------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  237 (411)
T 3nnk_A          167 YDALFYTDATASLGGNP---------LETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHR  237 (411)
T ss_dssp             HTCEEEEECTTTBTTBC---------CCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCC
T ss_pred             cCCEEEEECCcccCCcc---------cchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccc
Confidence            99999999998865432         1222234689999999986 4444 89999999988876432            


Q ss_pred             ----------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        312 ----------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       312 ----------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                                            ......++.+...++++.++++.+.+.  ++++++++++.+++.+.|++    .++.+
T Consensus       238 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~  313 (411)
T 3nnk_A          238 DGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQA----MGLET  313 (411)
T ss_dssp             CCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCB
T ss_pred             cccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCEe
Confidence                                  001122345777777777888776543  46788999999999999998    46665


Q ss_pred             eccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHH
Q psy15447        368 QGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIE  442 (457)
Q Consensus       368 ~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~  442 (457)
                      ..+.   .+.++++.++...       ...++.+.|+++ ||.++++..     +..++++|+++ +..+|++|++++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~~~~~i~~~~~  381 (411)
T 3nnk_A          314 FGDLKHKMNNVLGVVIPQGI-------NGDQARKLMLEDFGIEIGTSFG-----PLHGKVWRIGTMGYNARKDCVMTTLS  381 (411)
T ss_dssp             CSCGGGBCSSEEEEECCTTC-------CHHHHHHHHHHHHSEEEEECCG-----GGTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred             CCCcccccccEEEEECCCCC-------CHHHHHHHHHHhcCeEEeCccC-----CCCCCEEEEeCccCcCCHHHHHHHHH
Confidence            4332   2567777775433       356788999887 999987542     22357999998 77789999999999


Q ss_pred             HHHHHHHHhcCC
Q psy15447        443 TLCKSHDIAVQP  454 (457)
Q Consensus       443 ~l~~~~~~~~~~  454 (457)
                      +|+++++++..+
T Consensus       382 ~l~~~l~~~~~~  393 (411)
T 3nnk_A          382 ALEAVLNYLKFP  393 (411)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCC
Confidence            999999877544

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.97  E-value=4e-30  Score=257.47  Aligned_cols=340  Identities=11%  Similarity=0.050  Sum_probs=242.3

Q ss_pred             eeeEEeecCCccCCCCChhh--HHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-----CC--Cc---EEEec
Q psy15447         80 IPCINFATHNYLSFVENPDI--EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-----GL--EE---TALYS  147 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i--~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-----g~--~~---~i~~~  147 (457)
                      ++++||+++.+..++.+|.+  .+++.+++.+...  .+    |+......++++.+++++     +.  +.   +++++
T Consensus        47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~--~~----y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEI--FP----YAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTN  120 (430)
T ss_dssp             TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGT--SS----CCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred             CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccc--cc----cCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence            46899998765223335667  7776666543111  11    112222466777777776     53  46   77888


Q ss_pred             ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        148 FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       148 sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +|++|+..++.+++++||.|++..+.|..+...+.. .|.++..++.      .|++++++.+++..        .++++
T Consensus       121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~  192 (430)
T 2x5f_A          121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN--------KDKVI  192 (430)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC--------SSEEE
T ss_pred             CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC--------CCCEE
Confidence            889999999999999999999999999999888888 8988887764      36889998887532        24567


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHH-----cCcEEEEEcCcccccccCCC-Cccc-cccCCCCCCc-cEEEecCccc
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSK-----YQARIFVDESVSFGTLGSTG-HGVT-EYFGVSTEEV-DMIIGSLEHA  289 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~-----~g~~li~DEa~~~g~~g~~g-~~~~-~~~~~~~~~~-Di~~~s~sK~  289 (457)
                      +++.+++||+|.+.|   +++|+++|++     ||+++|+||+|+.+.++..+ ..+. ...+..++.+ +++++|+||+
T Consensus       193 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~  272 (430)
T 2x5f_A          193 MILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKE  272 (430)
T ss_dssp             EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHH
T ss_pred             EEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccC
Confidence            777778999999999   8899999999     99999999999865553221 1222 2222221111 5889999999


Q ss_pred             ccCcc---cEEEe---cHHHHHHHHhhCCcc--eecCCCcHHHHHHHHHHHH----HHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        290 LGSVG---GFCVG---SSYIIEHHRLSGSGY--CFSASLPPFLAVAANKALH----LLKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       290 lg~~g---G~v~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~aaa~a~l~----~~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                      +|++|   ||+++   ++++++.+.......  ..+.+.+++.++++.++++    ..++.+..+++++++.+++.+.|+
T Consensus       273 ~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~  352 (430)
T 2x5f_A          273 FFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVY  352 (430)
T ss_dssp             TTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            98655   99999   998888876432110  0123458888888888887    333333477888899999999998


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                      +.....++.+..+..+.++++.++ ..       ...++++.|.+ +||++.++.         .+++||+++. .++++
T Consensus       353 ~~~~~~g~~~~~~~~g~~~~~~~~-~~-------~~~~~~~~l~~~~gi~v~~g~---------~~~iRis~~~-~~~e~  414 (430)
T 2x5f_A          353 ADQYHSHWQAYDFNSGYFMAIKVH-DV-------DPEALRKHLIDKYSIGVIALN---------ATDIRIAFSC-VEKDD  414 (430)
T ss_dssp             CGGGTTTEEECCCCBSSEEEEEES-SS-------CHHHHHHHHHHHHCEECEECS---------SSEEEEEGGG-SCGGG
T ss_pred             hhCCCCCceeeCCCceEEEEeCCC-CC-------CHHHHHHHHHHhCCEEEecCC---------CCeEEEEEec-CCHHH
Confidence            311004777764444566888876 32       34578899998 899998752         4789999986 49999


Q ss_pred             HHHHHHHHHHHHHHh
Q psy15447        437 MNSLIETLCKSHDIA  451 (457)
Q Consensus       437 i~~~~~~l~~~~~~~  451 (457)
                      +++++++|+++++++
T Consensus       415 i~~~~~~l~~~l~~~  429 (430)
T 2x5f_A          415 IPHVFDSIAKAIDDL  429 (430)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999998765

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.97  E-value=5.5e-30  Score=248.93  Aligned_cols=329  Identities=17%  Similarity=0.181  Sum_probs=230.2

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      .++|||+++....  ..|++.+++.+...  +      ...|+..+...+|++++++++|.+.++++++|++|+..++.+
T Consensus         3 ~~~i~~~~~~~~~--p~~~~~~a~~~~~~--~------~~~y~~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~   72 (347)
T 1jg8_A            3 HMMIDLRSDTVTK--PTEEMRKAMAQAEV--G------DDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMA   72 (347)
T ss_dssp             --CEECSCGGGCC--CCHHHHHHHHTCCC--C------CGGGTCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHH
T ss_pred             ceEEEeccccCCC--CCHHHHHHHhcCCC--C------CcccCCChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHH
Confidence            4678998875533  45778777754321  0      112445667789999999999999999999999999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHH---HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-
Q psy15447        160 YVKRNDAVFVDENINFAIQT---GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-  230 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~---~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-  230 (457)
                      +.++||.|+++.++|.+...   .....|.++..+ .+     |++++++.+++...     ..+++++|++++++||+ 
T Consensus        73 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~-----~~~~~~~v~~~~~~npt~  146 (347)
T 1jg8_A           73 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNI-----HFPRTSLIAIENTHNRSG  146 (347)
T ss_dssp             HCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCT-----TSCCEEEEEEESSBTTTT
T ss_pred             hcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCccCHHHHHHHhccccc-----cccCceEEEEeccccccC
Confidence            99999999999999987653   456678887776 32     78888888753110     00256889999999999 


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-ccEEEecHHHHHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-GGFCVGSSYIIEH  306 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-gG~v~~~~~~~~~  306 (457)
                      |.+.|   +++|.++|++||+++|+||+|.++.++..+..... ..   ...|.++.|+||++|++ |+++++++++++.
T Consensus       147 G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~-~~---~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~  222 (347)
T 1jg8_A          147 GRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKE-YA---GYADSVMFCLSKGLCAPVGSVVVGDRDFIER  222 (347)
T ss_dssp             SBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHH-HH---HTCSEEEEESSSTTCCSSCEEEEECHHHHHH
T ss_pred             CccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHH-hc---ccccEEEEecccccCCCceEEEEcCHHHHHH
Confidence            99888   46889999999999999999865432211111111 10   12366677999999854 4467788888776


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecC-Cc
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQK-SD  384 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~-~~  384 (457)
                      ++.....+..+...+++.++++..+++...+   ..++..++.+++.+.|++   . ++.+. .++.++++++.++. ..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~-~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
T 1jg8_A          223 ARKARKMLGGGMRQAGVLAAAGIIALTKMVD---RLKEDHENARFLALKLKE---I-GYSVNPEDVKTNMVILRTDNLKV  295 (347)
T ss_dssp             HHHHHHHHTCCCSSTHHHHHHHHHHHHHSST---THHHHHHHHHHHHHHHHH---H-TCBCCGGGCCSSEEEEECTTSSS
T ss_pred             HHHHHHHcCCchhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHh---c-CceeccCCCcceEEEEEcccccC
Confidence            6432211211222355666666666654322   234445677888888887   3 55442 24567788888763 22


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                             ...++.++|.++||.+++..         .+++|++++..+|++|+++++++|+++++.+
T Consensus       296 -------~~~~~~~~l~~~gi~v~~~~---------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          296 -------NAHGFIEALRNSGVLANAVS---------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             -------CHHHHHHHHHHHTEECEEEE---------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             -------CHHHHHHHHHHCCCEEecCC---------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence                   34578999999999988643         3689999988899999999999999987653

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.97  E-value=2.7e-29  Score=250.09  Aligned_cols=318  Identities=11%  Similarity=0.078  Sum_probs=236.3

Q ss_pred             hhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc--EE-EecccHHHHHHHHHhhcCCCCEEEEeCccc
Q psy15447         98 DIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE--TA-LYSFGFSTSASAIAAYVKRNDAVFVDENIN  174 (457)
Q Consensus        98 ~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~--~i-~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h  174 (457)
                      .+.+++.+++.+...+..    .....+...++++++++++|.+.  .+ +++||++|+..++.++.++||.|++..+.|
T Consensus        21 ~~~~~v~~a~~~~~~~~~----~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~   96 (416)
T 3isl_A           21 EVDPRVLRVMSTPVVGQF----DPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGR   96 (416)
T ss_dssp             CCCHHHHHHTTSCCCCTT----SHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSH
T ss_pred             CcCHHHHHHhcccCCCCc----cHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCc
Confidence            455556666655322211    11235678899999999999653  34 566788999999999999999999998888


Q ss_pred             HH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC
Q psy15447        175 FA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ  247 (457)
Q Consensus       175 ~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g  247 (457)
                      .+  ....++..|.+++.++.+     |++++++.+++          +++++|++++++|++|.+.|+++|.++|++||
T Consensus        97 ~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~  166 (416)
T 3isl_A           97 FGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKK----------VKPKIVAMVHGETSTGRIHPLKAIGEACRTED  166 (416)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHH----------HCCSEEEEESEETTTTEECCCHHHHHHHHHTT
T ss_pred             ccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhh----------CCCcEEEEEccCCCCceecCHHHHHHHHHHcC
Confidence            77  556678889998888765     89999999974          23478999999999999999999999999999


Q ss_pred             cEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhC--------------
Q psy15447        248 ARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSG--------------  311 (457)
Q Consensus       248 ~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~--------------  311 (457)
                      +++|+||+|++|...         .+....++|+++.|++|++ |+.| |+++.++++++.+....              
T Consensus       167 ~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~  237 (416)
T 3isl_A          167 ALFIVDAVATIGGCE---------VKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAA  237 (416)
T ss_dssp             CEEEEECTTTTTTSC---------CCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC---------------
T ss_pred             CEEEEECCccccCCC---------cchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchh
Confidence            999999999866432         1222234689999999986 4444 88999999888776321              


Q ss_pred             ---------------------Ccce-ecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        312 ---------------------SGYC-FSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       312 ---------------------~~~~-~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                                           .... ..++.+...++++.++++.+.+.  ++++++++++++++.+.|++    .|+++
T Consensus       238 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~----~g~~~  313 (416)
T 3isl_A          238 LSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKA----MGLRL  313 (416)
T ss_dssp             ---CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCB
T ss_pred             ccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCEe
Confidence                                 0111 12345777777777788776543  46788999999999999998    47666


Q ss_pred             eccCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHH-HHHHHH
Q psy15447        368 QGHRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQD-MNSLIE  442 (457)
Q Consensus       368 ~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed-i~~~~~  442 (457)
                      ..+..   +.++++.++...       ...++.+.|.++ ||.++++..     +..++++|++++...|++| ++++++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~~~e~i~~~~~  381 (416)
T 3isl_A          314 FGDDSCKMPVVTCVEIPGGI-------DGESVRDMLLAQFGIEIASSFG-----PLAGKIWRIGTMGYSCRKENVLFVLA  381 (416)
T ss_dssp             CSCGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECBCCCS-----TTTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred             ccCccccCCcEEEEeCCCCC-------CHHHHHHHHHHhCCEEEecCCC-----CCCCCEEEEecccCCCcHHHHHHHHH
Confidence            53322   567778775433       456799999887 999987653     2346799999976667766 999999


Q ss_pred             HHHHHHHHhcCC
Q psy15447        443 TLCKSHDIAVQP  454 (457)
Q Consensus       443 ~l~~~~~~~~~~  454 (457)
                      +|+++++++..+
T Consensus       382 ~l~~~~~~~~~~  393 (416)
T 3isl_A          382 GLEAVLLRHNAG  393 (416)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCC
Confidence            999999876533

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.97  E-value=1.7e-29  Score=251.87  Aligned_cols=338  Identities=12%  Similarity=0.035  Sum_probs=235.1

Q ss_pred             CeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHH
Q psy15447         79 GIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFS  151 (457)
Q Consensus        79 G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~  151 (457)
                      |+++|||+.+.|.+..    ..+.+.+++.+.....   ..++....|..++.+++++.+.+..+.+   .++++++|++
T Consensus        37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~  113 (418)
T 3rq1_A           37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE---HVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTG  113 (418)
T ss_dssp             GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH---HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHH
T ss_pred             CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc---cCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHH
Confidence            5689999988775443    3455666654433211   0112222355666666666666655666   7888889999


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      |+..++.+++++||.|++..++|..+...+...|.++..++.      .|++++++.+++...      +.+++++++++
T Consensus       114 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~------~~~~~~vi~~~  187 (418)
T 3rq1_A          114 GIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAA------KQTNVVVIFNT  187 (418)
T ss_dssp             HHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHH------HCSEEEEEEEC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhc------cCCCEEEEEeC
Confidence            999999999999999999999999999999999999988773      278999999875321      02345788887


Q ss_pred             C-CCCCCCCCChH---HHHHHHH------HcCcEEEEEcCcccccccCCCC---cccc-ccCCCCCCccEEEecCccccc
Q psy15447        226 V-YMNSADICPLK---DILSLRS------KYQARIFVDESVSFGTLGSTGH---GVTE-YFGVSTEEVDMIIGSLEHALG  291 (457)
Q Consensus       226 v-~~~~G~i~~l~---~i~~l~~------~~g~~li~DEa~~~g~~g~~g~---~~~~-~~~~~~~~~Di~~~s~sK~lg  291 (457)
                      + +||+|.+.|.+   +|+++|+      +||+++|+||+|....  ..+.   .+.. ..++.++...|+++|+||++|
T Consensus       188 p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  265 (418)
T 3rq1_A          188 PGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYS--GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFT  265 (418)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGS--SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTT
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccc--CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCc
Confidence            7 99999999954   5556666      8999999999986432  2221   1222 223332211378899999998


Q ss_pred             Ccc---cEEEe---cHHHHHHHHhhCCccee--cCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHh
Q psy15447        292 SVG---GFCVG---SSYIIEHHRLSGSGYCF--SASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       292 ~~g---G~v~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L  356 (457)
                      ++|   ||+++   ++++++.+.........  ..+.+.++++++.+.++..       ++..+++++++++.+++.+.|
T Consensus       266 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L  345 (418)
T 3rq1_A          266 MYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEA  345 (418)
T ss_dssp             CCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            665   99988   88888887643211111  1235666666666665321       111245678888899999999


Q ss_pred             hcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        357 SQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                      ++    .|+++..+..+.++++.+.          ...++++.|.++||++.++.          +++||++. .+|+++
T Consensus       346 ~~----~g~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~g~----------~~iRis~~-~~~~~~  400 (418)
T 3rq1_A          346 AQ----VGLPMLPYRGGFFITIPTD----------SANAICEELKKEHIYVIALA----------NGIRIAAC-GIPKCQ  400 (418)
T ss_dssp             HH----HTCCCCCCCSSSEEEEECT----------THHHHHHHHHHTTEECEECS----------SEEEEEGG-GSCHHH
T ss_pred             Hh----cCCCCCCCCceEEEEcCCC----------CHHHHHHHHHhCCEEEecCC----------CCeEEEEe-cCCHHH
Confidence            88    3676654445555665543          23468888999999998753          68999976 579999


Q ss_pred             HHHHHHHHHHHHHHhc
Q psy15447        437 MNSLIETLCKSHDIAV  452 (457)
Q Consensus       437 i~~~~~~l~~~~~~~~  452 (457)
                      +++++++|+++++++.
T Consensus       401 i~~~~~~l~~~l~~~~  416 (418)
T 3rq1_A          401 MTGLAEKIYNAMKSLG  416 (418)
T ss_dssp             HTTHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998764

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.97  E-value=3.2e-29  Score=246.66  Aligned_cols=312  Identities=16%  Similarity=0.138  Sum_probs=235.0

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc----EEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE----TALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      +|++.+++.+++..+    .    .+...+...++++++++++|.+.    ++++++|++|+. ++.++.++||.|++..
T Consensus        14 ~~~v~~a~~~~~~~~----~----~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~   84 (384)
T 3zrp_A           14 KEDVLVAGLENNVGF----T----SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVS   84 (384)
T ss_dssp             CHHHHHHTTCCSCCT----T----SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEEC
T ss_pred             CHHHHHHhhcccccc----c----cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEec
Confidence            577777766554321    0    11235678899999999999664    678888999999 9999999999999888


Q ss_pred             cccHH--HHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFA--IQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~--~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +.|.+  ....+...|.++..++.+     |++++++.+++          .++++|++++++|++|.+.|+++|.++|+
T Consensus        85 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~  154 (384)
T 3zrp_A           85 NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRK----------SEYKLVALTHVETSTGVREPVKDVINKIR  154 (384)
T ss_dssp             SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHH----------SCEEEEEEESEETTTTEECCHHHHHHHHG
T ss_pred             CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHh----------CCCcEEEEeCCCCCCceECcHHHHHHHHH
Confidence            87755  334446778888888754     89999999875          24679999999999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHH-H------------h
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHH-R------------L  309 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~-~------------~  309 (457)
                      +||+++|+||+|++|...         .++...++|+++.|++|+++ +.| |++++++++++.+ .            .
T Consensus       155 ~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (384)
T 3zrp_A          155 KYVELIVVDGVSSVGAEE---------VKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRN  225 (384)
T ss_dssp             GGEEEEEEECTTTTTTSC---------CCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHH
T ss_pred             hcCCEEEEECcccccCcc---------ccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHH
Confidence            999999999999865432         12222346899999999985 444 8899999887766 1            1


Q ss_pred             hC---------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCC
Q psy15447        310 SG---------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTP  374 (457)
Q Consensus       310 ~~---------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~  374 (457)
                      ..         ... ..++.+...+++..++++.+...  ++++++++++.+++.+.|++    .++++..+.    .+.
T Consensus       226 ~~~~~~~~~~~~~~-~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~  300 (384)
T 3zrp_A          226 WLPVMRGAEEGKAA-YFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEA----LGLEIVARRPESYSNT  300 (384)
T ss_dssp             HHHHHHHHHTTCCC-CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSCSSGGGBCSS
T ss_pred             HHHHHHhhcccCCC-cCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----CCCeEccCcccccCcc
Confidence            00         111 11245676767777788766543  46788999999999999998    366665333    356


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      ++++.++. .       ...++.+.|.++||.++++.++    +  .+++|++++..+|++|+++++++|+++++++..+
T Consensus       301 ~~~~~~~~-~-------~~~~~~~~l~~~gi~v~~g~~~----~--~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~  366 (384)
T 3zrp_A          301 VTGVILKV-A-------DPQKVLAGTVNEGVEFAPGVHP----A--FKYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP  366 (384)
T ss_dssp             EEEEECSS-S-------CHHHHHHHHHTTTCCCEECCCT----T--CCEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEECCC-C-------CHHHHHHHHHHCCEEEecCCCC----C--cCEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence            66777765 2       4567999999999999876531    1  1789999999999999999999999999887654

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.97  E-value=5.6e-29  Score=245.63  Aligned_cols=317  Identities=12%  Similarity=0.103  Sum_probs=235.0

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      .+|++.+++.+++..    ..    .....+...++++++++++|.+   .++++++|++|+..+++++.++||.|++..
T Consensus        34 ~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~  105 (393)
T 3kgw_A           34 LAPRVLAAGSLRMIG----HM----QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGT  105 (393)
T ss_dssp             CCHHHHHHTTCCCCC----TT----SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCHHHHHHhcccccC----cc----cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEe
Confidence            357777776553311    11    1123467788999999999865   356778999999999999999999999887


Q ss_pred             cccHH--HHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 NINFA--IQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~~h~~--~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      +.|.+  ....+...|.++..++.     .|++++++.+++.          ++++|++++++|++|.+.|+++|+++|+
T Consensus       106 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~nptG~~~~l~~i~~l~~  175 (393)
T 3kgw_A          106 NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQH----------KPVLLFLVHGESSTGVVQPLDGFGELCH  175 (393)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHH
T ss_pred             CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC----------CCcEEEEeccCCcchhhccHHHHHHHHH
Confidence            76643  35566778888887763     4899999998752          4568899999999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Cc-ccEEEecHHHHHHHHhhCCcc--------
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SV-GGFCVGSSYIIEHHRLSGSGY--------  314 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~-gG~v~~~~~~~~~~~~~~~~~--------  314 (457)
                      +||+++|+||+|++|...         ++....++|+++.|++|+++ +. .|++++++++++.+......+        
T Consensus       176 ~~~~~li~De~~~~g~~~---------~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (393)
T 3kgw_A          176 RYQCLLLVDSVASLGGVP---------IYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDIT  246 (393)
T ss_dssp             HTTCEEEEECTTTTTTSC---------CCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHH
T ss_pred             HcCCEEEEECCccccCcc---------cchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHH
Confidence            999999999999865321         12222345899999999884 44 489999999988876432111        


Q ss_pred             -------------eecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC----CCCe
Q psy15447        315 -------------CFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR----DTPL  375 (457)
Q Consensus       315 -------------~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~----~~~~  375 (457)
                                   .+.++.++..++++.++++.+.+.  +++.++++++++++.+.|++    .++.+..+.    .+.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~  322 (393)
T 3kgw_A          247 YLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQE----MGLKFFVKDPEIRLPTI  322 (393)
T ss_dssp             HHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSSSSGGGBCSSE
T ss_pred             HHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----cCCeeccCChhhcCCeE
Confidence                         122345777777777888876542  56788999999999999998    366554221    2455


Q ss_pred             EEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        376 KYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       376 ~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      +++.+....       ...++.+.|+++ ||.+.++..+     ..++++|+++ +..+|++|+++++++|+++++++.+
T Consensus       323 ~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~  390 (393)
T 3kgw_A          323 TTVTVPAGY-------NWRDIVSYVLDHFSIEISGGLGP-----TEERVLRIGLLGYNATTENVDRVAEALREALQHCPK  390 (393)
T ss_dssp             EEEECCTTB-------CHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred             EEEeCCCCC-------CHHHHHHHHHHhCCEEEeCCccc-----CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence            567765443       456789999988 9999876542     3367999998 7667999999999999999988764


Q ss_pred             C
Q psy15447        454 P  454 (457)
Q Consensus       454 ~  454 (457)
                      .
T Consensus       391 ~  391 (393)
T 3kgw_A          391 N  391 (393)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.97  E-value=4.3e-29  Score=246.64  Aligned_cols=329  Identities=12%  Similarity=0.017  Sum_probs=239.3

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      ..|+|..+.    ...+|++.+++.+++..    ..    .+...+...++++++++++|.+  .++++++|++|+..++
T Consensus         9 ~~yl~~~~~----~~~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~   76 (392)
T 2z9v_A            9 PVITLTAGP----VNAYPEVLRGLGRTVLY----DY----DPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAA   76 (392)
T ss_dssp             CSEECSSSC----CCCCHHHHHHTTSCCCC----TT----SHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHH
T ss_pred             cceeecCCC----cCCCHHHHHHHhccccc----cc----cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHH
Confidence            345555432    12367888877665542    10    1223566789999999999965  5677788999999999


Q ss_pred             HhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        158 AAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       158 ~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      .++.++||.|++..+.|.+..  ..+...|.++..++.     .|++++++.+++.         +++++|++++++|++
T Consensus        77 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---------~~~~~v~~~~~~npt  147 (392)
T 2z9v_A           77 ASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAH---------PEITVVSVCHHDTPS  147 (392)
T ss_dssp             HHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHC---------TTCCEEEEESEEGGG
T ss_pred             HHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcC---------CCCcEEEEeccCCCC
Confidence            999999999999998887652  223446778877764     4799999998641         245788999999999


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHR  308 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~  308 (457)
                      |.+.|+++|.++|++||+++|+||+|++|....         ++...++|+++.|++|+++ +.| |++++++++++.++
T Consensus       148 G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~---------~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~  218 (392)
T 2z9v_A          148 GTINPIDAIGALVSAHGAYLIVDAVSSFGGMKT---------HPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMK  218 (392)
T ss_dssp             TEECCHHHHHHHHHHTTCEEEEECTTTBTTBSC---------CGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHH
T ss_pred             ceeccHHHHHHHHHHcCCeEEEEcccccCCccc---------ccccccceEEEecCcccccCCCceeEEEECHHHHHHhh
Confidence            999999999999999999999999998654321         1111135899999999774 445 89999999888775


Q ss_pred             hhC------------------CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        309 LSG------------------SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       309 ~~~------------------~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      ...                  ....+.++.++..++++.++++.+.+.  ++.+++++++.+++.+.|++   . |+.+.
T Consensus       219 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~---~-g~~~~  294 (392)
T 2z9v_A          219 ANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTA---M-GLSVW  294 (392)
T ss_dssp             TCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH---T-TCCBS
T ss_pred             hccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---c-CCeec
Confidence            311                  011223445777767777778766442  45788899999999999988   3 66665


Q ss_pred             ccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecC-CCCHHHHHHHHH
Q psy15447        369 GHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIE  442 (457)
Q Consensus       369 ~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~  442 (457)
                      .++    .+.++++.++...       ...++.++|.++ ||.+.++..+     ...+++|+++.. .+|++|++++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~~-----~~~~~lRi~~~~~~~~~~~i~~~~~  362 (392)
T 2z9v_A          295 AASDSIASPTTTAVRTPDGV-------DEKALRQAARARYGVVFSSGRGE-----TLGKLTRIGHMGPTAQPIYAIAALT  362 (392)
T ss_dssp             SSSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECEECCGG-----GTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred             cCCccccCCceEEEECCCCC-------CHHHHHHHHHhcCCEEEecCCCC-----CCCCeEEEeCcccccCHHHHHHHHH
Confidence            312    4677788775332       345788999998 9999876532     235799999644 789999999999


Q ss_pred             HHHHHHHHhcCC
Q psy15447        443 TLCKSHDIAVQP  454 (457)
Q Consensus       443 ~l~~~~~~~~~~  454 (457)
                      +|+++++++.-+
T Consensus       363 ~l~~~~~~~~~~  374 (392)
T 2z9v_A          363 ALGGAMNAAGRK  374 (392)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCC
Confidence            999999877543

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.97  E-value=5.7e-30  Score=254.08  Aligned_cols=338  Identities=13%  Similarity=0.086  Sum_probs=239.6

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcEE-EecccHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEETA-LYSFGFSTS  153 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~i-~~~sG~~a~  153 (457)
                      +.++|+++++++    +|++.+++.+++. .++.++.+++...|. +...++    ++++++++|.+... ++++|++|+
T Consensus        24 ~~~~~~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~   98 (405)
T 2vi8_A           24 AKIELIASENFV----SRAVMEAQGSVLTNKYAEGYPGRRYYGGC-EYVDIVEELARERAKQLFGAEHANVQPHSGAQAN   98 (405)
T ss_dssp             HSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCC-HHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred             cceeeccCcccC----CHHHHHHHHHHhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHH
Confidence            457888877765    7999999999985 454433333322222 233444    46999999988664 468999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHH-H--HHhcC--CeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQT-G--LIASR--CKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~-~--~~~~g--~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      ..++++++++||.|++..++|+++.. .  +...|  .++..++.      .|++++++.+++.          ++++|+
T Consensus        99 ~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~  168 (405)
T 2vi8_A           99 MAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLH----------RPKLIV  168 (405)
T ss_dssp             HHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH----------CCSEEE
T ss_pred             HHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEecccccccCCcCHHHHHHHHHhc----------CCeEEE
Confidence            99999999999999999999876542 1  11223  25555542      4789999988642          234666


Q ss_pred             EecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecH
Q psy15447        223 VEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSS  301 (457)
Q Consensus       223 ~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~  301 (457)
                      +.+.+  .|...++++|+++|++||+++|+||+|++|.++. +  ... .++  ...|+++.|+||+++ +.||++++++
T Consensus       169 ~~~~~--~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~--~~~-~~~--~~~di~~~s~sK~~~g~~gG~~~~~~  240 (405)
T 2vi8_A          169 AAAAA--YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA-G--LHP-NPV--PYAHFVTTTTHKTLRGPRGGMILCQE  240 (405)
T ss_dssp             ECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-T--SSC-CST--TTCSEEEEESSSTTCCCSCEEEEECH
T ss_pred             EeCCC--CCccCCHHHHHHHHHHcCCEEEEEcccccccccc-C--cCC-Ccc--ccCCEEEEeccccCCCCCCeEEEEcH
Confidence            64332  3566789999999999999999999999776542 1  111 222  245899999999996 7789999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYL  378 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i  378 (457)
                      ++++.+......+.++ +.++..++++.++++.+..  .++++++++++.+++.+.|++    .|+.+..+ ..++++++
T Consensus       241 ~~~~~l~~~~~~~~~~-~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~  315 (405)
T 2vi8_A          241 QFAKQIDKAIFPGIQG-GPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN----EGFTLVSGGTDNHLLLV  315 (405)
T ss_dssp             HHHHHHHHHHTTTTCS-SCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEE
T ss_pred             HHHHHHHhhhcccccC-CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCCeEecCCCCceEEEE
Confidence            8888876543333333 3466666776777776542  246788999999999999998    37877654 35788888


Q ss_pred             EecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+... .       ...++.+.|.++||.++++..|.. ..+...+.+|++++.    .++++|+++++++|+++++++.
T Consensus       316 ~~~~~~~-------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~  388 (405)
T 2vi8_A          316 DLRPQQL-------TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG  388 (405)
T ss_dssp             ECGGGTC-------CHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred             EccCCCC-------CHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence            87631 1       245688889899999987643211 001234689999986    6889999999999999987664

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.95  E-value=3e-33  Score=276.76  Aligned_cols=348  Identities=13%  Similarity=0.097  Sum_probs=245.5

Q ss_pred             eeeecCCCcEEEE-CCe--eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---
Q psy15447         65 YVVDQKSGYIVNI-NGI--PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM---  138 (457)
Q Consensus        65 ~~i~~~~g~~~~~-~G~--~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---  138 (457)
                      .+..+++|+++|+ +|+  +++||..+++ ++..+|++.+++.+++.+...++.       .  ...++++.+++++   
T Consensus        13 ~~~~~~~g~~~~d~~g~~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~y~-------~--~~~~l~~~la~~l~~~   82 (392)
T 3b1d_A           13 APNRLSHHTYKWKETETDPQLLPAWIADM-DFEVMPEVKQAIHDYAEQLVYGYT-------Y--ASDELLQAVLDWEKSE   82 (392)
Confidence            3455789999994 898  9999988776 677789999999999865211111       1  1445555555543   


Q ss_pred             -C----CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHh
Q psy15447        139 -G----LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQ  205 (457)
Q Consensus       139 -g----~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~  205 (457)
                       |    .+.++++++|++|+..++++++++||.|++..+.|..+...+...|.++..++.        .|++++++.+++
T Consensus        83 ~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~  162 (392)
T 3b1d_A           83 HQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVE  162 (392)
Confidence             4    345677778889999999999999999999999998888888878877776654        266777777753


Q ss_pred             hchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--CCcc
Q psy15447        206 QDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--EEVD  280 (457)
Q Consensus       206 ~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--~~~D  280 (457)
                                .++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++  |......+.+.+  .+.+
T Consensus       163 ----------~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--g~~~~~~~~~~~~~~~~~  230 (392)
T 3b1d_A          163 ----------NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLF--GHEHVSFNTVSPDFKDFA  230 (392)
Confidence                      23457777889999999877   889999999999999999999865543  222222233322  2446


Q ss_pred             EEEecCcccccCcc---cEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHH
Q psy15447        281 MIIGSLEHALGSVG---GFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       281 i~~~s~sK~lg~~g---G~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~  355 (457)
                      ++++|+||++|.+|   ||+++++ ++++.++.....+.++ +.+++.++++.++++..++ .++.+++++++.+++.+.
T Consensus       231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  309 (392)
T 3b1d_A          231 LVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHH-EVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEY  309 (392)
Confidence            88999999997555   8888864 5888776544333322 3477777777777764221 234667777888888888


Q ss_pred             hhcccccCCeEEeccCCCCeEEEEecCC-cchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCC
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLYLQKS-DDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHT  433 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t  433 (457)
                      |++.  .+++.+..+..+.++++.++.. .       ...++++.|+ ++||++.++..+.   ...++++|+++..  +
T Consensus       310 l~~~--~~~~~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~l~~~~gi~v~~g~~f~---~~~~~~iRi~~~~--~  375 (392)
T 3b1d_A          310 FAQE--APRLKVMKPQGTYLIWLDFSDYGL-------TDDALFTLLHDQAKVILNRGSDYG---SEGELHARLNIAA--P  375 (392)
Confidence            7651  1466665444455556666532 1       3457888887 7899998865432   1235789999764  6


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy15447        434 EQDMNSLIETLCKSHD  449 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~  449 (457)
                      ++++++++++|+++++
T Consensus       376 ~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          376 KSLVEEICKRIVCCLP  391 (392)
Confidence            8999999999988764

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.97  E-value=6.5e-29  Score=245.44  Aligned_cols=331  Identities=10%  Similarity=0.082  Sum_probs=237.4

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSA  154 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~  154 (457)
                      +|+.|.+..+    ....+|++.+++.+++..   ..     .....+...++++.+++++|.+   .++++++|++|+.
T Consensus        17 ~~~~~~~~~g----~~~~~~~v~~a~~~~~~~---~~-----~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~   84 (393)
T 2huf_A           17 TPNKLLMGPG----PSNAPQRVLDAMSRPILG---HL-----HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGME   84 (393)
T ss_dssp             CCCCEECSSS----CCCCCHHHHHHTTSCCCC---TT-----SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHH
T ss_pred             CCCeEEecCC----CCCCCHHHHHHHHhhhcc---CC-----CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHH
Confidence            3455554333    223468888887765532   00     0113567889999999999975   3556688899999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      .++.++.++||.|++..+.|.+..  ..+...|.+++.++.     .|++++++.+++.          ++++|++++++
T Consensus        85 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~  154 (393)
T 2huf_A           85 ATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIH----------KPSVLFLTQGD  154 (393)
T ss_dssp             HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHH----------CCSEEEEESEE
T ss_pred             HHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhcc----------CCcEEEEEccC
Confidence            999999999999999988877632  233456888887763     5899999988641          34688889999


Q ss_pred             CCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHH
Q psy15447        228 MNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIE  305 (457)
Q Consensus       228 ~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~  305 (457)
                      |++|.+.|+++|.++|++||+++|+||++++|...         .++...++|+++.|++|+++ +.| |++++++++++
T Consensus       155 nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~  225 (393)
T 2huf_A          155 SSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAP---------MFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVE  225 (393)
T ss_dssp             TTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC---------CCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHH
T ss_pred             CCccccCCHHHHHHHHHHcCCEEEEEcccccCCCC---------cchhhcCccEEEECCCcccccCCCeEEEEECHHHHH
Confidence            99999999999999999999999999998865321         11211245899999999864 445 89999999988


Q ss_pred             HHHhhC---Ccce-----------------e-cCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhccccc
Q psy15447        306 HHRLSG---SGYC-----------------F-SASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVT  362 (457)
Q Consensus       306 ~~~~~~---~~~~-----------------~-~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~  362 (457)
                      .++...   .++.                 + .++.+...++++.++++.+.+  .++.+++++++++++.+.|++    
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----  301 (393)
T 2huf_A          226 RYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQD----  301 (393)
T ss_dssp             HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH----
Confidence            876431   1211                 1 123466666666678877643  245778899999999999988    


Q ss_pred             CCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEe-cCCCCHHHH
Q psy15447        363 QRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDM  437 (457)
Q Consensus       363 ~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi  437 (457)
                      .|+.+..+.   .+.++++.++...       ...++.+.|.++ ||.++++..+     ...+++|+++ +...+++|+
T Consensus       302 ~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~~Ri~~~~~~~~~e~i  369 (393)
T 2huf_A          302 AGFELYADPKDRLSTVTTIKVPQGV-------DWLKAAQYAMKTYLVEISGGLGP-----TAGQVFRIGLMGQNATTERV  369 (393)
T ss_dssp             TTCCBSSCGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHCEECBCCCGG-----GTTTEEEEECCGGGCSHHHH
T ss_pred             cCCeeccCccccCCcEEEEEcCCCC-------CHHHHHHHHHHhCCEEEecCccc-----ccCCEEEEEcccCcCCHHHH
Confidence            366654332   2347777775332       345788889875 9999876532     2357999999 656689999


Q ss_pred             HHHHHHHHHHHHHhcCCC
Q psy15447        438 NSLIETLCKSHDIAVQPL  455 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~~~~  455 (457)
                      ++++++|+++++++..+.
T Consensus       370 ~~~~~~l~~~~~~~~~~~  387 (393)
T 2huf_A          370 DRVLQVFQEAVAAVKPDV  387 (393)
T ss_dssp             HHHHHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHHHHHcCCCc
Confidence            999999999998887653

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.97  E-value=2.8e-29  Score=250.13  Aligned_cols=328  Identities=13%  Similarity=0.073  Sum_probs=237.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      +|..|+|++++.    ..+|++.+++.+++.+ ++..........+..+...++++++++++|.+  .++++++|++++.
T Consensus        27 ~~~~yld~~~~~----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~  102 (416)
T 1qz9_A           27 EGVIYLDGNSLG----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLF  102 (416)
T ss_dssp             TTCEECCTTTSC----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHH
T ss_pred             CCeEeecCCCcC----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHH
Confidence            356777776542    3468899999999975 22211100111133577889999999999965  5677778888888


Q ss_pred             HHHHhhc------CCCC-EEEEeCcccHHHHHHHH----hc--CCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        155 SAIAAYV------KRND-AVFVDENINFAIQTGLI----AS--RCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       155 ~ai~a~~------~~gd-~v~~~~~~h~~~~~~~~----~~--g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++.++.      ++|| +|+.+.++|+++...+.    ..  |.++..++.  ++++++.+.           +++++|
T Consensus       103 ~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~~~l~~~i~-----------~~~~~v  169 (416)
T 1qz9_A          103 KVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS--PEELPQAID-----------QDTAVV  169 (416)
T ss_dssp             HHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS--GGGHHHHCS-----------TTEEEE
T ss_pred             HHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc--HHHHHHHhC-----------CCceEE
Confidence            8888876      8887 57778889997665432    23  888888876  777777664           245799


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--Ccc-cEEE
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVG-GFCV  298 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~g-G~v~  298 (457)
                      ++++++|++|.+.|+++|+++|++||+++|+||+|++|...   ... ..+     ++|+++.|++|+++  ..+ |+++
T Consensus       170 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~---~~~-~~~-----~~d~~~~s~~K~l~~g~~~~g~l~  240 (416)
T 1qz9_A          170 MLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVP---VDL-HQA-----GADYAIGCTYKYLNGGPGSQAFVW  240 (416)
T ss_dssp             EEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---CCH-HHH-----TCSEEEECSSSTTCCCTTCCCEEE
T ss_pred             EEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcC---CCh-hhc-----CCCEEEecCcccCCCCCCCeEEEE
Confidence            99999999999999999999999999999999999865432   111 112     24899999999973  455 8999


Q ss_pred             ecHHHHHHHHhhCCcc--------------------ee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHH
Q psy15447        299 GSSYIIEHHRLSGSGY--------------------CF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSL  355 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~  355 (457)
                      +++++++.++....++                    .+ .++.++..++++.++++.+.+.  +++.++++++++++.+.
T Consensus       241 ~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  320 (416)
T 1qz9_A          241 VSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIEL  320 (416)
T ss_dssp             ECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            9988766554321110                    11 2345777777788888877532  45788899999999999


Q ss_pred             hhcccccC--CeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        356 LSQHKVTQ--RFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       356 L~~~~~~~--~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      |+++.  +  |+.+..+.    .++++++.+.+          ..++.+.|.++||.+...         ..+.+|++++
T Consensus       321 L~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~~gi~~~~~---------~~~~lRis~~  379 (416)
T 1qz9_A          321 VEQRC--AAHELTLVTPREHAKRGSHVSFEHPE----------GYAVIQALIDRGVIGDYR---------EPRIMRFGFT  379 (416)
T ss_dssp             HHHHH--TTSCCEECSCSSGGGBCSEEEEECTT----------HHHHHHHHHTTTEECEEE---------TTTEEEEECC
T ss_pred             HHhhc--cCCCeEEeCCCCHHHcCCEEEEecCC----------HHHHHHHHHhCCcEeccC---------CCCeEEEeCc
Confidence            98720  3  77775442    35677777653          246888999999987532         2478999997


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        430 -ISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       430 -~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                       ..+|++|+++++++|++++++..
T Consensus       380 ~~~~t~~~i~~~~~~l~~~~~~~~  403 (416)
T 1qz9_A          380 PLYTTFTEVWDAVQILGEILDRKT  403 (416)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCHHHHHHHHHHHHHHHhccc
Confidence             58999999999999999987653

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.97  E-value=2.7e-28  Score=244.09  Aligned_cols=305  Identities=12%  Similarity=0.107  Sum_probs=215.5

Q ss_pred             HHHHHHHHhhcC----------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-hcCCeEEEecCC--
Q psy15447        128 LDLENDIASFMG----------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-ASRCKVQYFKHN--  194 (457)
Q Consensus       128 ~~l~~~la~~~g----------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-~~g~~~~~~~~~--  194 (457)
                      .+|++.++++++          .+.+++++++++++..++.+++++||.|++..++|..+...+. ..|.++..++.+  
T Consensus        86 ~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~  165 (428)
T 1iay_A           86 PEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESS  165 (428)
T ss_dssp             HHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCc
Confidence            456666666554          3456777777899999999999999999999999988776554 678888887642  


Q ss_pred             -----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC
Q psy15447        195 -----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       195 -----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~  266 (457)
                           |++++++.+++....     ..++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++....
T Consensus       166 ~~~~~d~~~l~~~l~~~~~~-----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~  240 (428)
T 1iay_A          166 NNFKITSKAVKEAYENAQKS-----NIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQF  240 (428)
T ss_dssp             TTTCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCC
T ss_pred             cCCcCCHHHHHHHHHHHHhc-----CCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCc
Confidence                 788999888753210     135677888889999999999   8999999999999999999998654432111


Q ss_pred             -cccccc------CCCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447        267 -GVTEYF------GVSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       267 -~~~~~~------~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~  335 (457)
                       .+....      ++.++. .+++.|+||++|.+|   |++++ ++++++.++.....  +  +.++++++++.++++..
T Consensus       241 ~~~~~~~~~~~~~~~~~d~-viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~a~~~~l~~~  315 (428)
T 1iay_A          241 VSIAEILDEQEMTYCNKDL-VHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF--G--LVSTQTQYFLAAMLSDE  315 (428)
T ss_dssp             CCHHHHHTSGGGTTSCTTS-EEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT--S--CCCHHHHHHHHHHTTCH
T ss_pred             cCHHHhccccccccCCCCc-EEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc--c--cCCHHHHHHHHHHhcCh
Confidence             111111      111322 288899999998655   89888 67888877643221  2  34777777777776532


Q ss_pred             h----hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEecc
Q psy15447        336 K----ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCP  410 (457)
Q Consensus       336 ~----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~  410 (457)
                      +    ..++++++++++.+++.+.|++    .|+++..+..+.++++.+...... .......++.+.|+++ ||++.++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~~  390 (428)
T 1iay_A          316 KFVDNFLRESAMRLGKRHKHFTNGLEV----VGIKCLKNNAGLFCWMDLRPLLRE-STFDSEMSLWRVIINDVKLNVSPG  390 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBCCCSSSSEEEEECGGGCSS-SSHHHHHHHHHHHHHTSCEECEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCcccCCCeeEEEEEechhhcCC-CchhHHHHHHHHHHHhCCEEEeCc
Confidence            2    1235677888999999999988    366665333677888887642100 0001345788999987 9999886


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+..   ..++++||+++ .+|++++++++++|++++++.
T Consensus       391 ~~~~~---~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~  427 (428)
T 1iay_A          391 SSFEC---QEPGWFRVCFA-NMDDGTVDIALARIRRFVGVE  427 (428)
T ss_dssp             GGGTC---SSSSEEEEECS-SSCHHHHHHHHHHHHHHHHTT
T ss_pred             hhhCC---CCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhcc
Confidence            54211   12468999998 589999999999999988653

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.97  E-value=3e-28  Score=235.61  Aligned_cols=310  Identities=12%  Similarity=0.093  Sum_probs=231.6

Q ss_pred             CCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         78 NGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        78 ~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      +.+++|||++| ++++  .+|.+.+++.+++..+..        | ..+...++++.+++++|.+  .+++++++++++.
T Consensus        14 ~~~~~i~l~~n~~~~~--~~~~v~~a~~~~~~~~~~--------y-~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~   82 (337)
T 3p1t_A           14 AAAQAVCLAFNENPEA--VEPRVQAAIAAAAARINR--------Y-PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFD   82 (337)
T ss_dssp             CCCCCEECSSCCCCSC--CCHHHHHHHHHHGGGTTS--------C-CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHH
T ss_pred             CCCCceEeeCCCCCCC--CCHHHHHHHHHhhhhhcc--------C-CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHH
Confidence            45789999988 5544  469999999998865321        1 1346788999999999965  4566666678888


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      .++.++  +||.|+++.++|..+...++..|.++..++.+     |++++++.             .+++++++++++||
T Consensus        83 ~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-------------~~~~~v~i~~p~np  147 (337)
T 3p1t_A           83 RISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPNDLAQV-------------SRDDCVVLANPSNP  147 (337)
T ss_dssp             HHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHHHHTTC-------------CTTEEEEEESSCTT
T ss_pred             HHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHhh-------------cCCCEEEEeCCCCC
Confidence            888877  89999999999999999999999999888743     67766543             13478899999999


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH  306 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~  306 (457)
                      +|.+.|++++.++|+++++ +|+||+|+..  +..+...     ....+.+++++|+||++|.+|   ||+++++++++.
T Consensus       148 tG~~~~~~~l~~l~~~~~~-~ivDea~~~~--~~~~~~~-----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~  219 (337)
T 3p1t_A          148 TGQALSAGELDQLRQRAGK-LLIDETYVDY--SSFRARG-----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAA  219 (337)
T ss_dssp             TCCCCCHHHHHHHHHHCSE-EEEECTTGGG--SSCSSSC-----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCc-EEEECCChhh--ccccccc-----cccCCCEEEEeeCchhccCcchheEEEEeCHHHHHH
Confidence            9999999999999999997 5669998642  2111111     111244799999999998555   999999999998


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      +.....    ..+.+++.++++.++++..+...+.++++.++.+++.+.|++    .|+.+. ++.+.++++...+.   
T Consensus       220 l~~~~~----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~~---  287 (337)
T 3p1t_A          220 MKRKQW----FCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRG----LGYRVA-SSEANFVLVENAAG---  287 (337)
T ss_dssp             HHTTSC----TTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBC-CCSSSEEEEECTTT---
T ss_pred             HHhhcC----CCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CcCEEC-CCCCeEEEEEcCCH---
Confidence            865432    224567777777666654322234567777888999999988    466654 45677777766543   


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                             ..+.+.|.++||.++++..+     ..++++|++++   +++|+++++++|+++.
T Consensus       288 -------~~~~~~l~~~gi~v~~g~~~-----~~~~~iRis~~---~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          288 -------ERTLRFLRERGIQVKDAGQF-----GLHHHIRISIG---REEDNDRLLAALAEYS  334 (337)
T ss_dssp             -------HHHHHHHHHTTEECEEGGGG-----TCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred             -------HHHHHHHHHCCeEEEECccC-----CCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence                   25677888999999987653     23579999986   7999999999998865

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.97  E-value=1.9e-28  Score=242.85  Aligned_cols=293  Identities=13%  Similarity=0.152  Sum_probs=220.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+..+++++|++|+..++.++.++||.|++..+.|.++...+    ...|.++..++.+|+++
T Consensus        62 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~  141 (398)
T 2rfv_A           62 GNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEE  141 (398)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHH
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence            57888999999999999999999999999999999999999999999999999888776    77899999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.++.   ..  .+     +
T Consensus       142 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~---~~--~~-----~  200 (398)
T 2rfv_A          142 IRAAMRP-----------ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ---PL--QL-----G  200 (398)
T ss_dssp             HHHHCCT-----------TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---GG--GG-----T
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---ch--hh-----C
Confidence            9888742           45789999999999999999999999999999999999998765532   11  12     3


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCccee-cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCF-SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      +|+++.|++|+++++    ||++++++++++ .++...  ..+ +.+.+++.++++.++++.+.   ...++..++.+.+
T Consensus       201 ~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l  275 (398)
T 2rfv_A          201 ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGL--KDITGGCMSPFNAWLTLRGVKTLG---IRMERHCENALKI  275 (398)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHH--HHTTCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHH
T ss_pred             CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHH--HhCCCCCCCHHHHHHHHhhhhhHH---HHHHHHHHHHHHH
Confidence            489999999999643    589999988876 444322  223 34568888888888876442   3556677788888


Q ss_pred             HHHhhccc-----------ccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------
Q psy15447        353 HSLLSQHK-----------VTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------  412 (457)
Q Consensus       353 ~~~L~~~~-----------~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------  412 (457)
                      .+.|++..           ..+++.+..+   ..++++++.+++..      ....++.+.+...|+.++.+..      
T Consensus       276 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~~l~~~~~~~~i~~~~G~~~~li~~  349 (398)
T 2rfv_A          276 ARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL------EAGRRMINSVELCLLAVSLGDTETLIQH  349 (398)
T ss_dssp             HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH------HHHHHHHTTCSSSEECSCCSSSSCEEEC
T ss_pred             HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCH------HHHHHHHHhCCcceeccCCCCcceeeec
Confidence            88776621           0122222211   35788888776421      1344566665556777765532      


Q ss_pred             Ccc--c----------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        413 LDQ--E----------AKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       413 ~~~--~----------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      |..  .          ....++.+|++++..+++++++++.++|+++
T Consensus       350 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          350 PASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             HHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             ccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence            110  0          0112589999999999999999999998764

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.97  E-value=1.2e-28  Score=239.61  Aligned_cols=310  Identities=11%  Similarity=0.021  Sum_probs=229.7

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRNDAVFVDEN  172 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~  172 (457)
                      .+|++.+++.+++..    .    ..+...+...++++++++++|.+  .++++++|++|+..++.++.++||.|++..+
T Consensus        12 ~~~~v~~a~~~~~~~----~----~~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~   83 (352)
T 1iug_A           12 LHPKALEALARPQLH----H----RTEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVY   83 (352)
T ss_dssp             CCHHHHHHHHSCCCC----T----TSHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCHHHHHHhccCCCC----c----cCHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeC
Confidence            468888888776541    1    11223456789999999999976  5677778999999999999999999999999


Q ss_pred             ccHHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH
Q psy15447        173 INFAIQ--TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK  245 (457)
Q Consensus       173 ~h~~~~--~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~  245 (457)
                      .|.+..  ..+...|.++..++.+     |++++++              +++++|++++++|++|.+.|+++|.++|++
T Consensus        84 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~--------------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~  149 (352)
T 1iug_A           84 GKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAK--------------EGYAGLLLVHSETSTGALADLPALARAFKE  149 (352)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCC--------------SSCSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred             CchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhc--------------cCCcEEEEEEecCCcceecCHHHHHHHHHh
Confidence            888864  3334568888877653     4444433              134688899999999999999999999999


Q ss_pred             c--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHH---------HH----
Q psy15447        246 Y--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEH---------HR----  308 (457)
Q Consensus       246 ~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~---------~~----  308 (457)
                      |  |+++|+||+|++|...         +++...++|+++.|++|++ |+.| |+++.++++++.         +.    
T Consensus       150 ~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (352)
T 1iug_A          150 KNPEGLVGADMVTSLLVGE---------VALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELK  220 (352)
T ss_dssp             HCTTCEEEEECTTTBTTBC---------CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHH
T ss_pred             hCCCCEEEEECCccccCcc---------eeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHh
Confidence            9  9999999999865431         1111123589999999966 4445 888888887654         11    


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CCCeEEEEecCCcch
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DTPLKYLYLQKSDDE  386 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~  386 (457)
                      ..... .+.++.++..++++.++++.+++. ++.+++++++++++.+.|++   . |+.+..+. .+.++++.++...  
T Consensus       221 ~~~~~-~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~~~~~~~~~--  293 (352)
T 1iug_A          221 AQKEG-ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEE---G-GLRPVPKRFSPAVAAFYLPEGV--  293 (352)
T ss_dssp             HHTTT-CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHH---T-TCEESCSSBCTTCEEEECCTTC--
T ss_pred             hcccC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-CCcccccccCCeEEEEEcCCCC--
Confidence            11111 233456777777778888876543 45778899999999999988   3 77776443 5678888876432  


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                           ...++.+.|.++||.+.++..+     ...+++|++++..+|++|+++++++|+++++++.
T Consensus       294 -----~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~  349 (352)
T 1iug_A          294 -----PYARVKEAFAQRGAVIAGGQGP-----LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL  349 (352)
T ss_dssp             -----CHHHHHHHHHTTTEECEECCGG-----GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred             -----CHHHHHHHHHHCCEEEEeCCCc-----cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence                 3457889999999999876531     2357899999998899999999999999988763

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.97  E-value=5.1e-28  Score=241.84  Aligned_cols=316  Identities=13%  Similarity=0.144  Sum_probs=224.7

Q ss_pred             ccChHHHHHHHHHHHhhcCCC-----------cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEE
Q psy15447        121 YGTNVVHLDLENDIASFMGLE-----------ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQ  189 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~  189 (457)
                      .|..++++++++.+++..|.+           .+++++++++|+..++.+++++||.|++..++|..+...++..|.++.
T Consensus        78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~  157 (425)
T 2r2n_A           78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNII  157 (425)
T ss_dssp             TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence            456777788888887777743           445556667899999999999999999999999999999999999888


Q ss_pred             EecC----CCHHHHHHHHHhhchhccc-CCCCccEEEEE-ecCCCCCCCCCCh---HHHHHHHHHcCcEEEEEcCccccc
Q psy15447        190 YFKH----NNMQHLEELLRQQDERDTL-NSKVTKKFIIV-EGVYMNSADICPL---KDILSLRSKYQARIFVDESVSFGT  260 (457)
Q Consensus       190 ~~~~----~d~~~le~~l~~~~~~~~~-~~~~~~~~vi~-e~v~~~~G~i~~l---~~i~~l~~~~g~~li~DEa~~~g~  260 (457)
                      .++.    .|+++|++.+++....... ....++++|++ ++++||+|.+.|.   ++|+++|++||+++|+||+|+...
T Consensus       158 ~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~  237 (425)
T 2r2n_A          158 NVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ  237 (425)
T ss_dssp             EECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred             EeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence            8764    3789999988642100000 00023456655 6889999999985   499999999999999999998655


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-  336 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-  336 (457)
                      ++.  ........++.++.+++++|+||++| +|   ||+++++++++.+........+  +.+++.++++.++++... 
T Consensus       238 ~~g--~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~--~~~~~~q~a~~~~l~~~~~  312 (425)
T 2r2n_A          238 FNK--FRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTL--HPSTFNQLMISQLLHEWGE  312 (425)
T ss_dssp             SSS--SCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTC--SSCHHHHHHHHHHHHHHHH
T ss_pred             CCC--CCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHhccc
Confidence            532  11111122223445799999999997 55   9999999998887654322223  347888888877776531 


Q ss_pred             -----hCcHHHHHHHHHHHHHHHHhhcccccCCe-EEeccCCCCeEEEEecCCcchHHHHHHHHH-HHHHHHHcCeeEec
Q psy15447        337 -----ANPSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGHRDTPLKYLYLQKSDDEVASKKLLQT-ICDMCIQAGFAITC  409 (457)
Q Consensus       337 -----~~~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~l~~~Gi~v~~  409 (457)
                           ...+++++++++.+++.+.|++.  .+++ .+..+..+.++++.++...       ...+ +.+.|.++||.+.+
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~p~~g~~~~~~~~~~~-------~~~~~~~~~l~~~gv~v~p  383 (425)
T 2r2n_A          313 EGFMAHVDRVIDFYSNQKDAILAAADKW--LTGLAEWHVPAAGMFLWIKVKGIN-------DVKELIEEKAVKMGVLMLP  383 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--CSSSEEECCCSBSSEEEEEETTCS-------CCHHHHHTHHHHTTEECEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCeEEeCCCceEEEEEEeCCCC-------CHHHHHHHHHHHCCcEEec
Confidence                 12346677888888888888762  1354 4444566788888887532       1224 57788899999998


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +..+........+++||+++. .+++++++++++|++++++.
T Consensus       384 g~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          384 GNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             GGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence            765422101124789999974 59999999999999988653

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.97  E-value=5.3e-29  Score=242.56  Aligned_cols=330  Identities=12%  Similarity=0.153  Sum_probs=231.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-EEEecccHHHHHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-TALYSFGFSTSASAIA  158 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~~sG~~a~~~ai~  158 (457)
                      ..+|||+++++.  ..+|++.+++.+++..       +...|+..+...++++++++++|.+. ++++++|++|+..+++
T Consensus         7 ~~~id~~~~~~~--~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~   77 (356)
T 1v72_A            7 PPALGFSSDNIA--GASPEVAQALVKHSSG-------QAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLS   77 (356)
T ss_dssp             CCCCBCSCGGGC--CCCHHHHHHHHHTTSS-------CCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHH
T ss_pred             CceEeeccCCcc--CCCHHHHHHHHhhccC-------cccccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHH
Confidence            468899887553  3579999999887531       12234567788999999999999655 5788899999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHH--HHhc--CCeEEEecCC----CHHHHHH-HHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQTG--LIAS--RCKVQYFKHN----NMQHLEE-LLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~--~~~~--g~~~~~~~~~----d~~~le~-~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      +++++||.|++..++|.+....  +...  |.+++.++.+    |++++++ .+++....    ...++++|++++++ +
T Consensus        78 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~----~~~~~~~v~~~~~~-~  152 (356)
T 1v72_A           78 AMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDV----HTTQPACVSITQAT-E  152 (356)
T ss_dssp             TSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCT----TSCEEEEEEEESSC-T
T ss_pred             HhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhh----ccCCceEEEEEcCC-C
Confidence            9999999999999999887765  6666  8888888764    7888888 77541000    01256888888876 4


Q ss_pred             CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-c-cEEEecHHHH
Q psy15447        230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-G-GFCVGSSYII  304 (457)
Q Consensus       230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~  304 (457)
                      +|.+.|   +++|+++|++||++||+||+|+.+.....+.. ...+++. ...|+++.|+||+ |.+ | |+++++++++
T Consensus       153 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~-~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~  229 (356)
T 1v72_A          153 VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS-PAEMTWK-AGVDALSFGATKN-GVLAAEAIVLFNTSLA  229 (356)
T ss_dssp             TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC-TTTTTGG-GTCCEEEECCGGG-TCSSCEEEEESSGGGH
T ss_pred             CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC-HHHhhhh-hcCCEEEEecccC-CCcCccEEEEECHHHH
Confidence            999665   78999999999999999999875422111111 1111111 1447888899999 544 4 5888888888


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      +.+.....   +.+........++.++++.+++.  .+..++++++.+++.+.|++   ++|+++..+..++++++.++ 
T Consensus       230 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~-  302 (356)
T 1v72_A          230 TEMSYRRK---RAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG---LGGVEVLGGTEANILFCRLD-  302 (356)
T ss_dssp             HHHHHHHH---HTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT---CTTEEEESCCCSSEEEEEEC-
T ss_pred             hhHHHHhh---ccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh---CCCcEEccCCCccEEEEEcC-
Confidence            77643211   11111111112233344545432  13567788889999999987   46888765666777777653 


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       .          +++++|.++||.+.++.+     .  .+++|++++..+|++|+++++++|++++++.
T Consensus       303 -~----------~~~~~l~~~gi~v~~g~~-----~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~  353 (356)
T 1v72_A          303 -S----------AMIDALLKAGFGFYHDRW-----G--PNVVRFVTSFATTAEDVDHLLNQVRLAADRT  353 (356)
T ss_dssp             -H----------HHHHHHHHTTCBCBCSSS-----S--TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred             -H----------HHHHHHHhcCeEEecccc-----C--CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence             1          588889999999986542     1  5799999999999999999999999887654

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.97  E-value=1e-28  Score=244.83  Aligned_cols=340  Identities=14%  Similarity=0.099  Sum_probs=231.2

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhh--cC---CCcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASF--MG---LEETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~--~g---~~~~i~~~sG~~a~  153 (457)
                      |++++||+++.+ ++..+|.+.+++.+++++.+....  ...|+......+|++.++++  .|   .+.+++++++++++
T Consensus        32 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al  108 (400)
T 3asa_A           32 QHTVINLSIGDT-TQPLNASVAEAFASSIARLSSPTT--CRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDL  108 (400)
T ss_dssp             TSCCEECSSCCC-CCCCCHHHHHHHHHHHHHHTSSSC--CCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHH
T ss_pred             CCceEeccCCCC-CCCCCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHH
Confidence            678999988765 455689999999999987542110  11122233457889999998  46   34566666777888


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCe-EEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCK-VQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      ..++. +.++||.|++..++|..+...++..|.+ +..++.++...+...+++.         +++++|++++++||+|.
T Consensus       109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~---------~~~~~v~l~~p~nptG~  178 (400)
T 3asa_A          109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPED---------THIDILCLCSPNNPTGT  178 (400)
T ss_dssp             HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCTT---------CCCSEEEEESSCTTTCC
T ss_pred             HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhhc---------cCccEEEEeCCCCCCCC
Confidence            77554 4578999999999999988888888988 8887764211111001110         24567777789999999


Q ss_pred             CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC-CCccEEEecCcccccCcc---cEEEecHHH--
Q psy15447        233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST-EEVDMIIGSLEHALGSVG---GFCVGSSYI--  303 (457)
Q Consensus       233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~-~~~Di~~~s~sK~lg~~g---G~v~~~~~~--  303 (457)
                      +.|   +++|+++|++||+++|+||+|+....+  +........++. .+.+++++|+||++|.+|   ||+++++++  
T Consensus       179 ~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~  256 (400)
T 3asa_A          179 VLNKDQLRAIVHYAIEHEILILFDAAYSTFISD--PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTY  256 (400)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC--TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBC
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC--CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhcc
Confidence            998   668899999999999999999843232  111111122211 133588999999998666   999998877  


Q ss_pred             -----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        304 -----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       304 -----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                           ++.+........++ +.+++.++++.++++.. ..++.+++++++.+++.+.|++    .|+.+..+..++++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~  330 (400)
T 3asa_A          257 ADGHFVIQDWERFLSTTFN-GASIPAQEAGVAGLSIL-PQLEAIHYYRENSDLLRKALLA----TGFEVFGGEHAPYLWV  330 (400)
T ss_dssp             TTSCBHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHH----TTCEEEECSSSSEEEE
T ss_pred             chhhhHHHHHHHHhccCcc-CCChHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHH----CCCeeeCCCCceEEEE
Confidence                 55553222122232 35777777777777654 3456889999999999999998    4777765556788888


Q ss_pred             E-ecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        379 Y-LQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       379 ~-~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      . ++...       ...++.+.|+++ ||.+.++..+.   +...+++||+.  ..+++++++++++|+++++..
T Consensus       331 ~~~~~~~-------~~~~~~~~l~~~~gv~v~~g~~f~---~~~~~~iRis~--~~~~e~i~~~l~~l~~~~~~~  393 (400)
T 3asa_A          331 KPTQANI-------SDRDLFDFFLREYHIAITPGIGFG---RSGSGFVRFSS--LGKREDILAACERLQMAPALQ  393 (400)
T ss_dssp             ECCCTTC-------CTTTHHHHHHHHHSEECEEGGGGC---GGGTTCEEEEC--CSCHHHHHHHHHHHHC-----
T ss_pred             eccCCCC-------CHHHHHHHHHHhCCEEEeChhHhC---CCCCCEEEEEe--eCCHHHHHHHHHHHHHHHHhh
Confidence            8 65432       223577777754 99998875432   12357899994  579999999999999887654

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.97  E-value=1.1e-27  Score=244.14  Aligned_cols=343  Identities=11%  Similarity=0.070  Sum_probs=237.5

Q ss_pred             ChhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHHHHHHHhhc-CCCCEEEE
Q psy15447         96 NPDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTSASAIAAYV-KRNDAVFV  169 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~~~ai~a~~-~~gd~v~~  169 (457)
                      .+++.+++.+++.+... ....+....|..+++.++++.+.+..|    .+.++++++|++++..++.+++ ++||.|++
T Consensus       108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv  187 (500)
T 3tcm_A          108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILV  187 (500)
T ss_dssp             CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEE
T ss_pred             CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEE
Confidence            35577777788876521 333344445666666666666665544    4567888888999999999998 89999999


Q ss_pred             eCcccHHHHHHHHhcCCeEEEec-------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHH
Q psy15447        170 DENINFAIQTGLIASRCKVQYFK-------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDI  239 (457)
Q Consensus       170 ~~~~h~~~~~~~~~~g~~~~~~~-------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i  239 (457)
                      +.+.|..+...++..|.+++.++       ..|+++|++.+++....     ..++++|++.+++||+|.+.+   +++|
T Consensus       188 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-----~~~~k~ivl~~p~NPtG~~~s~~~l~~i  262 (500)
T 3tcm_A          188 PIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSR-----GINVRALVVINPGNPTGQVLAEENQYDI  262 (500)
T ss_dssp             EESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHT-----TCEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred             eCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhc-----CCCceEEEEECCCCCCcccCCHHHHHHH
Confidence            99999999999999999988876       55899999999864321     124567777788999999988   5677


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCC--ccc---cccCCCCCC-ccEEEecCcccc-c---CcccEEEe---cHHHHHH
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGH--GVT---EYFGVSTEE-VDMIIGSLEHAL-G---SVGGFCVG---SSYIIEH  306 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~--~~~---~~~~~~~~~-~Di~~~s~sK~l-g---~~gG~v~~---~~~~~~~  306 (457)
                      +++|++||+++|+||+|+.+.++....  .+.   ..++...++ ..++++|+||++ |   .++||+++   ++++++.
T Consensus       263 ~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~  342 (500)
T 3tcm_A          263 VKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQ  342 (500)
T ss_dssp             HHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHH
T ss_pred             HHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHH
Confidence            777999999999999998877643211  111   122221122 247789999998 4   45699887   8888888


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCe
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPL  375 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  375 (457)
                      +.....   ...+.++...+++..+++           +.++.++++++++++++++.+.|++   ++|+.+..+..+.+
T Consensus       343 l~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~~~g~~~  416 (500)
T 3tcm_A          343 IYKIAS---VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNK---LEGITCNEAEGAMY  416 (500)
T ss_dssp             HHHHHH---TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCCCBTTE
T ss_pred             HHHHHh---cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEEecCCeEEE
Confidence            765431   112335555555555553           3333456778899999999999988   46888875555556


Q ss_pred             EEEEecCCcch-HHHH----HHHHHHH-HHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        376 KYLYLQKSDDE-VASK----KLLQTIC-DMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       376 ~~i~~~~~~~~-~~~~----~~~~~~~-~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .++.+..+... +...    .....++ +.|.++||++.++..+..  ..+.+++|+++.  ++++++++++++|+++++
T Consensus       417 ~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~  492 (500)
T 3tcm_A          417 VFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--VPGTWHFRCTIL--PQEDKIPAVISRFTVFHE  492 (500)
T ss_dssp             ECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC--CTTCCBEEEESC--SCTTTHHHHHHHHHHHHH
T ss_pred             EeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
Confidence            66555433210 0000    0012233 445567999998876532  234568999998  799999999999999988


Q ss_pred             HhcC
Q psy15447        450 IAVQ  453 (457)
Q Consensus       450 ~~~~  453 (457)
                      ++.+
T Consensus       493 ~~~~  496 (500)
T 3tcm_A          493 AFMS  496 (500)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7654

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.97  E-value=1.2e-28  Score=245.62  Aligned_cols=330  Identities=14%  Similarity=0.111  Sum_probs=212.7

Q ss_pred             CChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHH-HHHHHHHHHhhcCCCcE-EEecccHHHHHHHHHhhcCCCCEEEE
Q psy15447         95 ENPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVV-HLDLENDIASFMGLEET-ALYSFGFSTSASAIAAYVKRNDAVFV  169 (457)
Q Consensus        95 ~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~-~~~l~~~la~~~g~~~~-i~~~sG~~a~~~ai~a~~~~gd~v~~  169 (457)
                      .+|++.+++.+++. .++.++.+++...+.  .+. ....++.+++++|.+.. +++++|++|+..++++++++||.|++
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~  121 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLG  121 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEe
Confidence            38999999999984 454344333322221  123 33345788999998766 55889999999999999999999999


Q ss_pred             eCcccHHHH-HHH--HhcCC--eEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        170 DENINFAIQ-TGL--IASRC--KVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       170 ~~~~h~~~~-~~~--~~~g~--~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      ..++|.+.. .+.  ...+.  ....++     ..|++++++.+++.          ++++|+++++++  |...|+++|
T Consensus       122 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~~--~~~~~l~~l  189 (420)
T 3gbx_A          122 MNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEH----------KPKMIIGGFSAY--SGVVDWAKM  189 (420)
T ss_dssp             EEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHH----------CCSEEEECCTTC--CSCCCHHHH
T ss_pred             cchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhc----------CCeEEEEecCcc--CCccCHHHH
Confidence            999998743 222  22222  333332     26899999999752          245777765544  458899999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH---HHHHHHHhhCCcce
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS---YIIEHHRLSGSGYC  315 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~---~~~~~~~~~~~~~~  315 (457)
                      +++|++||++||+||+|+.|..+. +..    ... ...+|+++.|+||++ |+.||++++++   ++.+.+.....+..
T Consensus       190 ~~l~~~~~~~li~De~~~~~~~~~-~~~----~~~-~~~~di~~~s~sK~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~  263 (420)
T 3gbx_A          190 REIADSIGAYLFVDMAHVAGLIAA-GVY----PNP-VPHAHVVTTTTHKTLAGPRGGLILAKGGDEELYKKLNSAVFPSA  263 (420)
T ss_dssp             HHHHHHTTCEEEEECTTTHHHHHT-TSS----CCS-TTTSSEEEEESSGGGCSCSCEEEEESSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHcCCEEEEECCcchhceec-ccC----Ccc-cccCCEEEeecccCCCCCCceEEEEcCCcHHHHHHhhhhcCCCC
Confidence            999999999999999987665432 111    111 123689999999999 56789999987   77777765433333


Q ss_pred             ecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHH
Q psy15447        316 FSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLL  393 (457)
Q Consensus       316 ~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~  393 (457)
                      +++..++..++++.+....+++ .++++++++++.+++.+.|++    .|+.+... ..++++++.+.....      ..
T Consensus       264 ~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~------~~  333 (420)
T 3gbx_A          264 QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN----RGYKVVSGGTENHLFLLDLVDKNL------TG  333 (420)
T ss_dssp             -CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEECGGGTC------CH
T ss_pred             CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh----cCCeeccCCCCCeEEEEEcCCCCC------CH
Confidence            3332233333333232232222 245688899999999999988    67877543 457788887754210      34


Q ss_pred             HHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHhc
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..+.+.|.++||++.+...|.. ..+...+.+||+++..    ++++|+++++++|+++++...
T Consensus       334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~  397 (420)
T 3gbx_A          334 KEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNIN  397 (420)
T ss_dssp             HHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCcc
Confidence            5677888889999987433321 1122345699998754    568999999999999887643

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.97  E-value=8e-29  Score=245.97  Aligned_cols=336  Identities=12%  Similarity=0.078  Sum_probs=236.0

Q ss_pred             eeeEEeecC-CccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCcE-EEecccHHH
Q psy15447         80 IPCINFATH-NYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEET-ALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i~~~sG~~a  152 (457)
                      ++++|+.++ +++    +|++.+++.+++.+ +..++..++...|.. ....++    +++++++|.+.. +++++|++|
T Consensus        23 ~~~i~~~~~~~~~----~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~-~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a   97 (407)
T 2dkj_A           23 REGLELIASENFV----SKQVREAVGSVLTNKYAEGYPGARYYGGCE-VIDRVESLAIERAKALFGAAWANVQPHSGSQA   97 (407)
T ss_dssp             HTSEECCTTCCCC----CHHHHHHHTSGGGGCCCCEETTEESSSCCH-HHHHHHHHHHHHHHHHHTCSEEECCCSSHHHH
T ss_pred             hcceeeccCCCCC----CHHHHHHHHhhhhcCcccCCCcccccCCch-HHHHHHHHHHHHHHHHhCCCcceEEecchHHH
Confidence            568898765 343    79999999999875 443333333222332 222333    589999998866 667899999


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHH---HHHHhcCC--eEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQ---TGLIASRC--KVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~---~~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +..+++++.++||.|++..+.|.++.   ..+...|.  ....++      ..|++++++.+++.          ++++|
T Consensus        98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~v  167 (407)
T 2dkj_A           98 NMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH----------RPKVI  167 (407)
T ss_dssp             HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH----------CCSEE
T ss_pred             HHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc----------CCeEE
Confidence            99999999999999999999987662   22333333  334442      24799999998741          23566


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~  300 (457)
                      ++..+++  |.+.|+++|+++|++||+++|+||+|+.|.... +... .  ..  +..|+++.|+||+++ +.||+++++
T Consensus       168 ~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~~~-~--~~--~~~di~~~s~sK~l~g~~~G~~~~~  239 (407)
T 2dkj_A          168 VAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAA-GLHP-N--PL--PYAHVVTSTTHKTLRGPRGGLILSN  239 (407)
T ss_dssp             EECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TCSC-C--CT--TTCSEEEEESSGGGCCCSCEEEEES
T ss_pred             EEecccc--CCCCCHHHHHHHHHHcCCEEEEEcccccccccc-CccC-C--cc--ccccEEEEeccccCCCCCceEEEEC
Confidence            6644444  377889999999999999999999998765432 1111 0  01  125899999999994 678999999


Q ss_pred             -HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeE
Q psy15447        301 -SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLK  376 (457)
Q Consensus       301 -~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~  376 (457)
                       +++++.+......+.. ++.++..++++.++++.+..  .++++++++++.+++.+.|++    .|+++..+ ..++++
T Consensus       240 ~~~~~~~l~~~~~~~~~-~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~  314 (407)
T 2dkj_A          240 DPELGKRIDKLIFPGIQ-GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELAR----RGYRIVTGGTDNHLF  314 (407)
T ss_dssp             CHHHHHHHHHHHTTTTC-SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEE
T ss_pred             CHHHHHHHHhhhccccc-CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh----CCceeecCCCCceEE
Confidence             7888887654333322 23566666677777776532  246788999999999999998    37777643 467888


Q ss_pred             EEEecCC-cchHHHHHHHHHHHHHHHHcCeeEeccccCccc-cCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKS-DDEVASKKLLQTICDMCIQAGFAITCPSHLDQE-AKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       377 ~i~~~~~-~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~  450 (457)
                      ++.++.. .       ...++.+.|.++||.+.++..|... .+..++.+|++++.    .+|++|+++++++|+++++.
T Consensus       315 ~~~~~~~~~-------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          315 LVDLRPKGL-------TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             EEECGGGTC-------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             EEECcccCC-------CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            8887641 1       2456888899999999876543110 11235689999976    37999999999999999877

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.96  E-value=1.2e-28  Score=239.55  Aligned_cols=311  Identities=13%  Similarity=0.079  Sum_probs=227.1

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---c-EEEecccHHHHHHHHHhhcCCCCEEEEe
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---E-TALYSFGFSTSASAIAAYVKRNDAVFVD  170 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~-~i~~~sG~~a~~~ai~a~~~~gd~v~~~  170 (457)
                      .+|++.+++.+++..    ..    .+...+...++++.+++++|.+   . ++++++|++|+..++.++.+  |.|++.
T Consensus        11 ~~~~v~~a~~~~~~~----~~----~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~   80 (353)
T 2yrr_A           11 IPERVQKALLRPMRG----HL----DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLVL   80 (353)
T ss_dssp             CCHHHHGGGGSCCCC----TT----CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEE
T ss_pred             CCHHHHHHHhccccc----cc----CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEE
Confidence            467888877766543    10    1123456889999999999973   3 56667888999999998876  667777


Q ss_pred             CcccHHH--HHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHH
Q psy15447        171 ENINFAI--QTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR  243 (457)
Q Consensus       171 ~~~h~~~--~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~  243 (457)
                      .+.|.+.  ...++..|.++..++.     .|++++++.+++.          ++++|++++++|++|.+.|+++|.++|
T Consensus        81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~~~~v~~~~~~nptG~~~~~~~i~~l~  150 (353)
T 2yrr_A           81 VNGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRR----------RYRMVALVHGETSTGVLNPAEAIGALA  150 (353)
T ss_dssp             ECSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHS----------CCSEEEEESEETTTTEECCHHHHHHHH
T ss_pred             cCCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhC----------CCCEEEEEccCCCcceecCHHHHHHHH
Confidence            7666653  3445677888887774     4789999988641          346888999999999999999999999


Q ss_pred             HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHh------------
Q psy15447        244 SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRL------------  309 (457)
Q Consensus       244 ~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~------------  309 (457)
                      ++||+++|+||+|++|...   .. ...+     ++|+++.|++|+++ +.| |++++++++++.++.            
T Consensus       151 ~~~~~~li~D~a~~~~~~~---~~-~~~~-----~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~  221 (353)
T 2yrr_A          151 KEAGALFFLDAVTTLGMLP---FS-MRAM-----GVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVA  221 (353)
T ss_dssp             HHHTCEEEEECTTTTTTSC---CC-HHHH-----TCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHH
T ss_pred             HHcCCeEEEEcCccccccc---cc-cccc-----CceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHh
Confidence            9999999999999865431   11 1112     24899999999774 344 899999988876541            


Q ss_pred             -hCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCc
Q psy15447        310 -SGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSD  384 (457)
Q Consensus       310 -~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~  384 (457)
                       ......+.++.++..++++.++++.+.+.  ++.+++++++++++.+.|++    .|+++..+.  .+.++++.++...
T Consensus       222 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~  297 (353)
T 2yrr_A          222 EHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKA----RGFRPYPKASPLPTVLVVRPPEGV  297 (353)
T ss_dssp             HHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCEESCSSSBCTTEEEEECCTTC
T ss_pred             hhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----CCCccccCccCCCeEEEEECCCCC
Confidence             00011233455777777777788776432  45788899999999999988    377775433  4566677775332


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH-HHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN-SLIETLCKSHDI  450 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~-~~~~~l~~~~~~  450 (457)
                             ...++.+.|.++||.+.++..+     ..++++|++++..+|++|++ +++++|++++++
T Consensus       298 -------~~~~~~~~l~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~  352 (353)
T 2yrr_A          298 -------DADRLVRALYAEGVAVAGGIGP-----TRGQVLRLGLMGEGARREAYQAFLKALDRALAL  352 (353)
T ss_dssp             -------CHHHHHHHHHHTTEECEECCGG-----GTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred             -------CHHHHHHHHHHCCEEEeCCccc-----cCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence                   3457899999999999876532     23578999998888999999 999999998764

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.96  E-value=6.4e-28  Score=244.03  Aligned_cols=343  Identities=12%  Similarity=0.079  Sum_probs=232.2

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      .|++|+||.++...     +++.+++.+++.. +.      ..|+..+...+|+++++++++.+.+++++||++|+..++
T Consensus        41 ~g~~ylD~~~~~~~-----~~v~~a~~~~~~~-~~------~~y~~~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al  108 (467)
T 1ax4_A           41 SSAVYIDLLTDSGT-----NAMSDHQWAAMIT-GD------EAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILF  108 (467)
T ss_dssp             GGGCSEECSCSSSC-----CCEEHHHHHHHHT-CC------CCSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHH
T ss_pred             CCceeeecccCcCC-----HHHHHHHHHHHhh-cc------cccccCccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHH
Confidence            57889999764322     7888888888764 21      123345677899999999999999999999999999999


Q ss_pred             HhhcC----CCCE---EEEeCcccHHHHHHHHhcCCeEEEec---------------CCCHHHHHHHHHhhchhcccCCC
Q psy15447        158 AAYVK----RNDA---VFVDENINFAIQTGLIASRCKVQYFK---------------HNNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       158 ~a~~~----~gd~---v~~~~~~h~~~~~~~~~~g~~~~~~~---------------~~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      +++++    +||.   |++..+.|..+...+...|..+...+               ..|+++|++.+++..       .
T Consensus       109 ~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-------~  181 (467)
T 1ax4_A          109 PVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG-------A  181 (467)
T ss_dssp             HHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC-------G
T ss_pred             HHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC-------C
Confidence            99988    9997   77775445666777788887766432               138999999997532       1


Q ss_pred             CccEEEEEecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCccc-ccc-------cCCCCcccccc-CCCCCCccEE
Q psy15447        216 VTKKFIIVEGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSF-GTL-------GSTGHGVTEYF-GVSTEEVDMI  282 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~-g~~-------g~~g~~~~~~~-~~~~~~~Di~  282 (457)
                      +++++|++++++|++ |.+.+   +++|+++|++||++||+||++.+ +.+       +..+....... +. ...+|++
T Consensus       182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~  260 (467)
T 1ax4_A          182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM-YKYADAL  260 (467)
T ss_dssp             GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHH-GGGCSEE
T ss_pred             CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhh-ccccceE
Confidence            257899999999998 77766   67999999999999999999765 222       22111111100 00 0234788


Q ss_pred             EecCcccccCc-ccEEEec-H-HHHHHHHhhC----CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH
Q psy15447        283 IGSLEHALGSV-GGFCVGS-S-YIIEHHRLSG----SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL  355 (457)
Q Consensus       283 ~~s~sK~lg~~-gG~v~~~-~-~~~~~~~~~~----~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~  355 (457)
                      +.|+||++|.+ ||+++++ + ++++.+....    ....++ ..+....++...+++...+ ++..++..++.+++.+.
T Consensus       261 ~~s~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~  338 (467)
T 1ax4_A          261 TMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYG-GLAGRDMAAMVQGLEEGTE-EEYLHYRIGQVKYLGDR  338 (467)
T ss_dssp             EEETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTT-TCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHH
T ss_pred             EEeccccCCCCcceEEEeCCHHHHHHHHHhhccccccccccC-CccchHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHH
Confidence            89999999876 7888887 6 7777654321    111122 1232222222224544322 23455556788899999


Q ss_pred             hhcccccCCeEEeccCCCCeEEEE-------ecCCcchHHHHHHHHHHHHHH-HHcCeeEec-cccCccc-------cCC
Q psy15447        356 LSQHKVTQRFLVQGHRDTPLKYLY-------LQKSDDEVASKKLLQTICDMC-IQAGFAITC-PSHLDQE-------AKK  419 (457)
Q Consensus       356 L~~~~~~~~~~~~~~~~~~~~~i~-------~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~-~~~~~~~-------~~~  419 (457)
                      |++    .++++..+..+..+++.       +....      ....+++++| .++||.+.+ +.+....       .+.
T Consensus       339 L~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~  408 (467)
T 1ax4_A          339 LRE----AGIPIQYPTGGHAVFVDCKKLVPQIPGDQ------FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHA  408 (467)
T ss_dssp             HHH----TTCCBCSSCCSSEEEEESTTTCTTSCGGG------CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCC
T ss_pred             HHh----CCCCcccCCCceEEEEehhhhccccccCC------CCHHHHHHHHHHhcCceeeecCcccccccccccccccc
Confidence            987    56666555667777776       22110      0356788998 888999987 3221000       011


Q ss_pred             CCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        420 QKPSIRITCN-ISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       420 ~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..+++||+++ ..+|++|+++++++|+++++.+.
T Consensus       409 ~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~  442 (467)
T 1ax4_A          409 DMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA  442 (467)
T ss_dssp             SCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred             ccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence            2479999998 45899999999999999887754

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.96  E-value=1.3e-27  Score=233.08  Aligned_cols=278  Identities=13%  Similarity=0.101  Sum_probs=207.5

Q ss_pred             HHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCC-CEEEEeCcccHHHHHHHHhcCCeEEEecC-----CCHHH
Q psy15447        127 HLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRN-DAVFVDENINFAIQTGLIASRCKVQYFKH-----NNMQH  198 (457)
Q Consensus       127 ~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~g-d~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----~d~~~  198 (457)
                      ..++++.+|+++|.+  .++++++|++++..++++++++| |.|++..++|..+...++..|.++..++.     .|+++
T Consensus        60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~  139 (356)
T 1fg7_A           60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQG  139 (356)
T ss_dssp             CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHH
T ss_pred             HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHHH
Confidence            578999999999864  56677777899999999999999 99999999999988888888999888875     35666


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      +++.++            ++++|++++++||+|.+.|.+   +|+++|+ ||+++|+||+|+.+..+   ..+....+. 
T Consensus       140 l~~~i~------------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~~~~~~~~~-  202 (356)
T 1fg7_A          140 ISDKLD------------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---ASLAGWLAE-  202 (356)
T ss_dssp             HHTSCT------------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---GCSGGGTTT-
T ss_pred             HHHHhc------------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---CcHHHHHhh-
Confidence            665542            246777789999999999855   5555566 99999999999854311   112222121 


Q ss_pred             CCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHH
Q psy15447        276 TEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCN  350 (457)
Q Consensus       276 ~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~  350 (457)
                       .+.++++.|+||++|.+|   ||+++++++++.++.....+    +.+++.++++.++++....  .++.+++++++++
T Consensus       203 -~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  277 (356)
T 1fg7_A          203 -YPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY----PLSTPVADIAAQALSPQGIVAMRERVAQIIAERE  277 (356)
T ss_dssp             -CTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS----CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence             234788999999998665   99999999999887654433    4578888888887754322  3346778888999


Q ss_pred             HHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEec
Q psy15447        351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       351 ~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~  429 (457)
                      ++.+.|++   ..++....++.++++++.++ +         ..++.++|.++||.+++ +.++     ...+++|++++
T Consensus       278 ~l~~~L~~---~~~~~~~~~~~~~~~~~~~~-~---------~~~l~~~L~~~gI~v~~~g~~~-----~~~~~iRis~~  339 (356)
T 1fg7_A          278 YLIAALKE---IPCVEQVFDSETNYILARFK-A---------SSAVFKSLWDQGIILRDQNKQP-----SLSGCLRITVG  339 (356)
T ss_dssp             HHHHHHHH---STTEEEECCCSSSEEEEEET-T---------HHHHHHHHHHTTEECEECTTST-----TCTTEEEEECC
T ss_pred             HHHHHHHh---CCCceEECCCCCeEEEEECC-C---------HHHHHHHHHHCCEEEEECCCCC-----CCCCeEEEEeC
Confidence            99999988   33432333556788888775 2         24688899999999988 5442     22468999986


Q ss_pred             CCCCHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~  447 (457)
                         +++|+++++++|+++
T Consensus       340 ---~~~e~~~~~~~l~~~  354 (356)
T 1fg7_A          340 ---TREESQRVIDALRAE  354 (356)
T ss_dssp             ---CHHHHHHHHHHHHTC
T ss_pred             ---CHHHHHHHHHHHHhh
Confidence               699999999998753

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.96  E-value=1.3e-27  Score=238.65  Aligned_cols=339  Identities=13%  Similarity=0.094  Sum_probs=217.2

Q ss_pred             eeEEeecC-CccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHHHHHHH-HHHHhhcCCCcEE-EecccHHHHH
Q psy15447         81 PCINFATH-NYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVVHLDLE-NDIASFMGLEETA-LYSFGFSTSA  154 (457)
Q Consensus        81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~~~~l~-~~la~~~g~~~~i-~~~sG~~a~~  154 (457)
                      +.+++.++ +++    +|++.+++.+++. .|+.++.+++...+.  .+...+++ +.+++++|.+... ++++|++|+.
T Consensus        33 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~  108 (425)
T 3ecd_A           33 SQVELIASENIV----SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFNAGHANVQPHSGAQANG  108 (425)
T ss_dssp             HSEECCTTCCCC----CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred             cceeeecccCCC----CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhCCCCceeecCchHHHHH
Confidence            45666544 442    8999999999984 554444333332222  23445554 7788999988874 4889999999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHH-HHHHHH--hcCC--eEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        155 SAIAAYVKRNDAVFVDENINFA-IQTGLI--ASRC--KVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~-~~~~~~--~~g~--~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      .++++++++||.|++..+.|.+ ...+..  ..+.  ....++.+      |++++++.+++.          ++++|++
T Consensus       109 ~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~  178 (425)
T 3ecd_A          109 AVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQH----------KPSLIIA  178 (425)
T ss_dssp             HHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred             HHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhc----------CCcEEEE
Confidence            9999999999999999999877 223322  3343  44455433      899999998742          3457777


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-H
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-S  301 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~  301 (457)
                      +++++  |...++++|+++|++||++||+||+|+.|.+.. +..    .+.. ..+|++++|+||+++ +.||+++++ +
T Consensus       179 ~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~-~~~----~~~~-~~~di~~~s~sK~l~g~~~g~~~~~~~  250 (425)
T 3ecd_A          179 GFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAA-GRH----ANPV-EHAHVVTSTTHKTLRGPRGGFVLTNDE  250 (425)
T ss_dssp             ECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT-TSS----CCGG-GTCSEEEEESSGGGCCCSCEEEEESCH
T ss_pred             ccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhc-ccc----cCch-hcCcEEEecCCcccCCCCcEEEEeCCH
Confidence            75554  678899999999999999999999987665432 211    1111 125899999999994 568999888 5


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYLY  379 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~  379 (457)
                      .+.+.+.........++..++..++++.+....+++ .++++++++++.+++.+.|++    .|+++..+ ..++++++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~  326 (425)
T 3ecd_A          251 EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKA----GGVDLVTGGTDNHLLLVD  326 (425)
T ss_dssp             HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEEE
T ss_pred             HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh----CCCeeccCCCCceEEEEE
Confidence            676666543322222222333443333333333322 245778899999999999988    67777643 457788887


Q ss_pred             ecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        380 LQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.....      ....+.+.|.++||.+.+...|.. ..+...+.+|++++    ..++++++++++++|+++++..
T Consensus       327 ~~~~~~------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~  397 (425)
T 3ecd_A          327 LRPKGL------KGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL  397 (425)
T ss_dssp             CGGGTC------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCC------CHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence            753210      345677888889999985443321 01223468999954    4456999999999999998876

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.96  E-value=3.7e-29  Score=247.83  Aligned_cols=335  Identities=14%  Similarity=0.093  Sum_probs=219.9

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-CCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-GPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      ++.-|+|++++.    ..+|++.+++.+++.+....+. .....++..+...++++++++++|.+  .++++++|++|+.
T Consensus        19 ~~~iyld~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~   94 (400)
T 3vax_A           19 SHMTYLDAAATT----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNN   94 (400)
T ss_dssp             ---CCCCCCCCS----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHH
T ss_pred             CCcEEecCCCCC----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHH
Confidence            456678877653    2478999999999976321111 11111223566889999999999975  6778888899999


Q ss_pred             HHHHhhc----CCCC-EEEEeCcccHHHHHHHHh---cCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        155 SAIAAYV----KRND-AVFVDENINFAIQTGLIA---SRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       155 ~ai~a~~----~~gd-~v~~~~~~h~~~~~~~~~---~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      .++.++.    ++|| .|+++.+.|+++...+..   .|.++..++.+     |++++++.++           +++++|
T Consensus        95 ~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-----------~~~~~v  163 (400)
T 3vax_A           95 IALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLR-----------PDTLLV  163 (400)
T ss_dssp             HHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCC-----------TTEEEE
T ss_pred             HHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcC-----------CCceEE
Confidence            9999987    8999 999999999887665544   58888888765     7888887764           246899


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEE-e
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCV-G  299 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~-~  299 (457)
                      ++++++|++|.+.|+++|.++|++||+++|+||+|++|....         ++... +|+++.|++|.+|+.| |+++ .
T Consensus       164 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~-~d~~~~s~~K~~g~~g~g~~~~~  233 (400)
T 3vax_A          164 SLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG---------DLTTP-IDMISISGHKIGAPKGVGALVTR  233 (400)
T ss_dssp             ECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG---------GGGSC-CSEEEEETGGGTSCSSCEEEEEC
T ss_pred             EEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc---------Chhhc-CcEEEEeHHHhCCCCceEEEEEe
Confidence            999999999999999999999999999999999998654321         11112 5899999999777654 6766 6


Q ss_pred             cH-HHH---HHHHhhCC----c-ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447        300 SS-YII---EHHRLSGS----G-YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG  369 (457)
Q Consensus       300 ~~-~~~---~~~~~~~~----~-~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~  369 (457)
                      ++ .+.   ..+.....    . ....++.++..++++.++++.+.+. ++.+++++++++++.+.|+.    +++.+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~  309 (400)
T 3vax_A          234 RREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLAS----TSFQVNG  309 (400)
T ss_dssp             BCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTT----TTCEECS
T ss_pred             cchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhCC----CCEEEeC
Confidence            55 111   11111110    0 0112345777777777788776543 56788899999999999984    7887764


Q ss_pred             cCC---CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc----------cCCC----CCeEEEEe-cCC
Q psy15447        370 HRD---TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE----------AKKQ----KPSIRITC-NIS  431 (457)
Q Consensus       370 ~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------~~~~----~~~lRi~~-~~~  431 (457)
                      +..   +.++.+.+...        ...++.+.|. +||.++++..+...          ....    .+++||++ +..
T Consensus       310 ~~~~~~~~~~~~~~~~~--------~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~  380 (400)
T 3vax_A          310 DQDHVVPHILNLSFEDV--------DAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ  380 (400)
T ss_dssp             CTTSBCTTEEEEECTTC--------CHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred             CcccCCCCEEEEEeCCC--------CHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence            433   35677766543        3457888999 99988775432110          0011    48999999 999


Q ss_pred             CCHHHHHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~~~~  450 (457)
                      +|++|+++++++|+++++.
T Consensus       381 ~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          381 ATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             -------------------
T ss_pred             CCHHHHHHHHHHHHHHhcc
Confidence            9999999999999987653

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.96  E-value=5.3e-28  Score=237.49  Aligned_cols=311  Identities=10%  Similarity=-0.008  Sum_probs=220.6

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCEEEEeC
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDAVFVDE  171 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~  171 (457)
                      +|++.+++.+++..    .. +   ....+...++++++++++|.+   ..++ ++||++|+..++++++++||.|++..
T Consensus        31 ~~~v~~a~~~~~~~----~~-~---~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~  102 (376)
T 3f0h_A           31 SEEVRAIGAEQVPY----FR-T---TEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVID  102 (376)
T ss_dssp             CHHHHHHHTSCCCC----CS-S---HHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred             cHHHHHHhcCCCCC----CC-C---HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEe
Confidence            57788777665421    11 1   123467788999999999865   4555 46779999999999999999888776


Q ss_pred             c-ccHHHH-HHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH
Q psy15447        172 N-INFAIQ-TGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS  244 (457)
Q Consensus       172 ~-~h~~~~-~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~  244 (457)
                      + +|+... ......|.++..++.     .|++++++.+.           +++++|++++++|++|.+.|+++|+++|+
T Consensus       103 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-----------~~~~~v~~~~~~nptG~~~~l~~i~~l~~  171 (376)
T 3f0h_A          103 GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDN-----------QNFTGLLVNVDETSTAVLYDTMMIGEFCK  171 (376)
T ss_dssp             SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTT-----------SCCCEEEEESEETTTTEECCHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhc-----------cCceEEEEecccCCcceecCHHHHHHHHH
Confidence            5 444322 345566777776653     37888877542           35678889999999999999999999999


Q ss_pred             HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhCC-cc-------
Q psy15447        245 KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSGS-GY-------  314 (457)
Q Consensus       245 ~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~-~~-------  314 (457)
                      +||+++|+||+++++...    .-.+.+     ++|+++.|++|+++ +.| |+++.++++++.+..... ++       
T Consensus       172 ~~~~~li~D~~~~~~~~~----~~~~~~-----~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (376)
T 3f0h_A          172 KNNMFFVCDCVSAFLADP----FNMNEC-----GADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDA  242 (376)
T ss_dssp             HTTCEEEEECTTTTTTSC----CCHHHH-----TCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHH
T ss_pred             HcCCEEEEEcCccccCcc----cccccc-----CccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHH
Confidence            999999999999865331    011122     34799999999997 444 788999998888764221 11       


Q ss_pred             -------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447        315 -------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD  384 (457)
Q Consensus       315 -------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~  384 (457)
                             ....+.+...++++.++++.+.+.   ++.+++.+++.+++.+.|++    .++.+..+.....+........
T Consensus       243 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~  318 (376)
T 3f0h_A          243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD----LPFELVSESPANGVTSVHPTTA  318 (376)
T ss_dssp             HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT----SSEEECCSSBBTTEEEEEESSS
T ss_pred             HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----cCCccCccccCceEEEEeCCCC
Confidence                   012234555556677778776654   45778888899999999988    5676654333333322222222


Q ss_pred             chHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                             ...++.+.|.++ ||.++++..     +...+++|++++..+|++|+++++++|++++++
T Consensus       319 -------~~~~l~~~l~~~~gi~v~~g~~-----~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~  373 (376)
T 3f0h_A          319 -------NAYDIFLKLKDEYGIWICPNGG-----EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR  373 (376)
T ss_dssp             -------CHHHHHHHHHHHSSEECEECCG-----GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             -------CHHHHHHHHHHhCCEEEecCcc-----ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence                   356789999998 999987632     123579999999999999999999999998753

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.96  E-value=2.3e-28  Score=247.16  Aligned_cols=336  Identities=12%  Similarity=0.064  Sum_probs=238.1

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCC-CCCC-CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGS-CGPR-GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~-~~~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      ++.++.|.++. ++.. ++.+.+++.+++++|+... .+.. ...+..+...++++++++++|.+  .+++++++++++.
T Consensus        65 ~~~~iyld~~~-~g~~-p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~  142 (465)
T 3e9k_A           65 DENAIYFLGNS-LGLQ-PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLH  142 (465)
T ss_dssp             TCBCEECBTTT-SCCE-ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHH
T ss_pred             CCCeEEecCCc-cCCC-hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHH
Confidence            34455555432 3433 4668888888887654211 1111 11234566688999999999965  5677778889999


Q ss_pred             HHHHhhcCCCC---EEEEeCcccHHHHH----HHHhcCCeE-----EEecCC-----CHHHHHHHHHhhchhcccCCCCc
Q psy15447        155 SAIAAYVKRND---AVFVDENINFAIQT----GLIASRCKV-----QYFKHN-----NMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       155 ~ai~a~~~~gd---~v~~~~~~h~~~~~----~~~~~g~~~-----~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      .++.++.++++   .|+++.+.|.+...    .++..|.++     ...+.+     |++++++.++++.        ++
T Consensus       143 ~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~--------~~  214 (465)
T 3e9k_A          143 LLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEG--------DS  214 (465)
T ss_dssp             HHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHG--------GG
T ss_pred             HHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcC--------CC
Confidence            99999976554   59999999987544    445567653     233322     7999999997643        35


Q ss_pred             cEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc--cCcc-
Q psy15447        218 KKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL--GSVG-  294 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l--g~~g-  294 (457)
                      +++|++++++|++|.+.|+++|.++|++||+++|+|++|+.|....         ++...++|++++|++|++  |+.| 
T Consensus       215 ~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~---------~~~~~~~D~~~~s~~K~l~~gp~~~  285 (465)
T 3e9k_A          215 IAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVEL---------YLHDWGVDFACWCSYKYLNAGAGGI  285 (465)
T ss_dssp             EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCC---------CHHHHTCCEEEECSSSTTCCCTTCC
T ss_pred             eEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCC---------chhhcCCCEEEECcccccccCCCce
Confidence            7899999999999999999999999999999999999998765421         111124589999999999  3433 


Q ss_pred             cEEEecHHHHHHHHhhCCcc---------------ee--------cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHH
Q psy15447        295 GFCVGSSYIIEHHRLSGSGY---------------CF--------SASLPPFLAVAANKALHLLKAN--PSLLTKLREKC  349 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~~~~---------------~~--------~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~  349 (457)
                      |+++.++++.+.+.....++               .+        .++.++..+++..++++.+.+.  ++++++.+++.
T Consensus       286 g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~  365 (465)
T 3e9k_A          286 AGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLT  365 (465)
T ss_dssp             CEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             EEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence            78888887765543221111               00        1256778888888888887652  56788899999


Q ss_pred             HHHHHHhhcccc-------cCCeEEeccC----CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC
Q psy15447        350 NTMHSLLSQHKV-------TQRFLVQGHR----DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK  418 (457)
Q Consensus       350 ~~l~~~L~~~~~-------~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~  418 (457)
                      +++.+.|++...       .+++++..+.    .+.++++.++.         ...++.+.|.++||.+...        
T Consensus       366 ~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---------~~~~l~~~L~~~Gi~v~~~--------  428 (465)
T 3e9k_A          366 GYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---------PNKDVFQELEKRGVVCDKR--------  428 (465)
T ss_dssp             HHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC---------TTCCHHHHHHTTTEECEEE--------
T ss_pred             HHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC---------CHHHHHHHHHHCCEEEecC--------
Confidence            999999987210       0578776543    27788887762         2236889999999988632        


Q ss_pred             CCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        419 KQKPSIRITC-NISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       419 ~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       .++++|+++ +..+|++|+++++++|++++++.
T Consensus       429 -~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~  461 (465)
T 3e9k_A          429 -NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA  461 (465)
T ss_dssp             -TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             -CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence             247999999 89999999999999999988654

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.96  E-value=3.1e-27  Score=234.07  Aligned_cols=291  Identities=14%  Similarity=0.141  Sum_probs=216.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+.+++++||++|+..++.++.++||.|++..+.|.++...+    ...|.++..++..|+++
T Consensus        63 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~  142 (398)
T 1gc0_A           63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQA  142 (398)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence            56788999999999999999999999999999999999999999999999998877765    56688999999889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.++.   ..  .     .+
T Consensus       143 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~---~~--~-----~~  201 (398)
T 1gc0_A          143 LEAAMTP-----------ATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR---PL--E-----LG  201 (398)
T ss_dssp             HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC---GG--G-----GT
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCC---ch--h-----hC
Confidence            9888753           56899999999999999999999999999999999999998765532   11  1     23


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|++|++    ||+++++++.++ .++..... .++++.+|+.++++.++++.+   +.++++..++.+.+.
T Consensus       202 ~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~  277 (398)
T 1gc0_A          202 ADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD-MTGAVLSPHDAALLMRGIKTL---NLRMDRHCANAQVLA  277 (398)
T ss_dssp             CSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH-HTCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHH
T ss_pred             ceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc-cCCCCCCHHHHHHHHhccchH---HHHHHHHHHHHHHHH
Confidence            589999999999753    689999887665 44322211 144567888888887777644   346677888888888


Q ss_pred             HHhhcccc-----------cCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc---c----
Q psy15447        354 SLLSQHKV-----------TQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS---H----  412 (457)
Q Consensus       354 ~~L~~~~~-----------~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~----  412 (457)
                      +.|+++..           .+++.+..+   ..++++.+.+...         ...+.+.+.+.|+.+....   .    
T Consensus       278 ~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~  348 (398)
T 1gc0_A          278 EFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGG---------IGAGRRFMNALQLFSRAVSLGDAESLA  348 (398)
T ss_dssp             HHHHTCTTEEEEEEC----------------CCTTEEEEEETTH---------HHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred             HHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCC---------HHHHHHHHHhCCCceeccCCCCcceee
Confidence            88876321           112222211   3477888877542         1235556666787765421   1    


Q ss_pred             --Ccc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        413 --LDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       413 --~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                        |..            .....++.+|++++..+++++++.+.++|+++
T Consensus       349 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          349 QHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS  397 (398)
T ss_dssp             ECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             ecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence              111            00112579999999999999999999999864

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.96  E-value=4.5e-28  Score=236.18  Aligned_cols=328  Identities=14%  Similarity=0.116  Sum_probs=229.4

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIA  158 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~  158 (457)
                      .+++|.+ ++.+ ..+|++.+++.+++..|+.+       .|..+...++++++++++|.+  .++++++|++|+..+++
T Consensus        14 ~~i~l~~-~~~~-~~~~~v~~a~~~~~~~~~~~-------~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~   84 (359)
T 1svv_A           14 KPYSFVN-DYSV-GMHPKILDLMARDNMTQHAG-------YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACS   84 (359)
T ss_dssp             -CEECSC-SCSS-CCCHHHHHHHHHHTTCCCCS-------TTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHH
T ss_pred             eeEEecC-CCcC-CCCHHHHHHHHHHHhhcccc-------ccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHH
Confidence            4788887 4445 45899999999998754322       346788999999999999854  46788899999999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHH--HHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQT--GLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      +++++||.|++..+.|.++..  .++..|.++..++.+    |++++++.+++....   . ..++++|+++++ |++|.
T Consensus        85 ~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~---~-~~~~~~v~~~~~-~ptG~  159 (359)
T 1svv_A           85 LALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE---H-MVIPKLVYISNT-TEVGT  159 (359)
T ss_dssp             HHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST---T-SCEEEEEEEESS-CTTSC
T ss_pred             HHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc---c-CCCceEEEEEcC-CCCce
Confidence            999999999999999998877  377789899888865    589999998753100   0 124678888888 68999


Q ss_pred             CCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHH
Q psy15447        233 ICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHR  308 (457)
Q Consensus       233 i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~  308 (457)
                      +.|   +++|+++|++||+++|+||+|....+|..+... ...++. ...|+++.|.+|..+..| |+++.++++++.++
T Consensus       160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~-~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~  237 (359)
T 1svv_A          160 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDL-TLADIA-RLTDMFYIGATKAGGMFGEALIILNDALKPNAR  237 (359)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCC-CHHHHH-HHCSEEEEECTTTTCSSCEEEEECSGGGCTTHH
T ss_pred             ecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcch-hhhhhh-hcCCEEEEecccCCCCCceEEEEEcccHHHHHH
Confidence            999   889999999999999999998321122222110 111100 134788889999866555 88888888776665


Q ss_pred             hhC--CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447        309 LSG--SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD  384 (457)
Q Consensus       309 ~~~--~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~  384 (457)
                      ...  .++.++.+ .+.. ++..+.   +++.  ++++++++++.+++.+.|+.    +++++..+..++++++.+.   
T Consensus       238 ~~~~~~~~~~~~~-~~~~-~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~---  305 (359)
T 1svv_A          238 HLIKQRGALMAKG-WLLG-IQFEVL---MKDNLFFELGAHSNKMAAILKAGLEA----CGIRLAWPSASNQLFPILE---  305 (359)
T ss_dssp             HHHHHTTCCCTTT-HHHH-HHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCCSSSEECBEEE---
T ss_pred             HHHhcCCcccccc-hhhH-HHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhcc----CCeEEccCCccceEEEEcC---
Confidence            321  22222221 2222 222222   3322  35778889999999999943    6777665555666665443   


Q ss_pred             chHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        385 DEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                               .++.+.|.++ ||++....      +...+++|++++..+|++|+++++++|+++++++
T Consensus       306 ---------~~~~~~l~~~~gi~v~~~~------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          306 ---------NTMIAELNNDFDMYTVEPL------KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST  358 (359)
T ss_dssp             ---------HHHHHHHTTTEECEEEEEE------TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred             ---------HHHHHHHHHhcCEEEEecc------cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence                     2588899998 99983211      1234689999999999999999999999887653

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.96  E-value=1.5e-26  Score=229.42  Aligned_cols=292  Identities=15%  Similarity=0.177  Sum_probs=215.9

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...++++.+++++|.+.++++++|++|+..++.+++++||.|++..+.|.++..    .++..|.++..++.+|++++
T Consensus        61 ~~~~~~l~~~ia~~~g~~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l  140 (404)
T 1e5e_A           61 NPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEV  140 (404)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHH
T ss_pred             ChHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence            56778999999999999999999999999999999999999999999999998877    67888999999999899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      ++.+++           ++++|++++++||+|.+.|+++|.++|++ ||+++|+||+|+.+.+..   .+ + +     +
T Consensus       141 ~~~i~~-----------~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~---~~-~-~-----~  199 (404)
T 1e5e_A          141 KKHMKP-----------NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN---PV-D-F-----G  199 (404)
T ss_dssp             HHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC---GG-G-G-----T
T ss_pred             HHhcCC-----------CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCC---cc-c-c-----C
Confidence            888742           46899999999999999999999999999 999999999998765421   11 1 2     3


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      .|+++.|+||+++++    ||++++++++++ .++..... .++.+.+++.++++.++++.+   +.+.++..++.+.+.
T Consensus       200 ~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~-~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~l~  275 (404)
T 1e5e_A          200 VDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKD-ITGSVISPHDAWLITRGLSTL---NIRMKAESENAMKVA  275 (404)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCC-CCCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHhHhHH---HHHHHHHHHHHHHHH
Confidence            589999999999754    599999998887 66644322 124457888888888777543   235666777777777


Q ss_pred             HHhhcccc-----------cCCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc--------
Q psy15447        354 SLLSQHKV-----------TQRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS--------  411 (457)
Q Consensus       354 ~~L~~~~~-----------~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------  411 (457)
                      +.|++...           .+++.+..   ...+.++.+.+++.         ...+.+.+.+.||++....        
T Consensus       276 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~~l~~~~i~~~~~s~G~~~sl~  346 (404)
T 1e5e_A          276 EYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG---------FEGAKKLLDNLKLITLAVSLGGCESLI  346 (404)
T ss_dssp             HHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH---------HHHHHHHHHTCSSSEESSCCCSSSCEE
T ss_pred             HHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCC---------HHHHHHHHHhCCCceeccCCCCcceee
Confidence            77766210           11222111   11367777776532         1234455556788555421        


Q ss_pred             -cCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        412 -HLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       412 -~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                       +|...            ....++.+|++++.    ||++++++.|+++++.+..
T Consensus       347 ~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~~  397 (404)
T 1e5e_A          347 QHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALLR  397 (404)
T ss_dssp             ECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHHC
T ss_pred             ecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHHH
Confidence             11110            01115799999986    8899999999988876644

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.96  E-value=3.3e-27  Score=232.94  Aligned_cols=315  Identities=12%  Similarity=0.114  Sum_probs=230.9

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN  174 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h  174 (457)
                      .|++.+++.+++++...       .+...+...++++++++++|.+..++++||++|+..++.++ .++||.|++..+.|
T Consensus        16 ~~~~~~a~~~~l~~~~~-------~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~   88 (388)
T 1b9h_A           16 DDAERNGLVRALEQGQW-------WRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTF   88 (388)
T ss_dssp             CHHHHHHHHHHHHTSCC-------BTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred             CHHHHHHHHHHHHcCCe-------eecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence            37899999999876211       12345678899999999999988999999999999999999 89999999999999


Q ss_pred             HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      .++...+...|.+++.++.+      |++++++.+++           ++++|+   ++|++|.+.|+++|.++|++||+
T Consensus        89 ~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~-----------~~~~v~---~~n~tG~~~~l~~i~~la~~~~~  154 (388)
T 1b9h_A           89 ISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVTP-----------RTKVIM---PVHMAGLMADMDALAKISADTGV  154 (388)
T ss_dssp             THHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-----------TEEEEC---CBCGGGCCCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-----------CceEEE---EeCCccCcCCHHHHHHHHHHcCC
Confidence            99999999999998887642      78888887742           345665   67789999999999999999999


Q ss_pred             EEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccc-cCcccEEEecHH-H--HHHHHhhC-Cc-------c
Q psy15447        249 RIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HAL-GSVGGFCVGSSY-I--IEHHRLSG-SG-------Y  314 (457)
Q Consensus       249 ~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~l-g~~gG~v~~~~~-~--~~~~~~~~-~~-------~  314 (457)
                      ++|+||+|+.|... .|..+ ..++      |+.+.|||  |++ |+.||+++++++ +  ++.++... .+       +
T Consensus       155 ~li~D~a~~~g~~~-~~~~~-~~~~------~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (388)
T 1b9h_A          155 PLLQDAAHAHGARW-QGKRV-GELD------SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRY  226 (388)
T ss_dssp             CBCEECTTCTTCEE-TTEEG-GGSS------SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSC
T ss_pred             EEEEecchhcCCcc-CCeec-cccc------ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccc
Confidence            99999999876432 12211 1121      56677887  777 456799888875 5  55553221 10       1


Q ss_pred             -----eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc------CCCCeEEEEecCC
Q psy15447        315 -----CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH------RDTPLKYLYLQKS  383 (457)
Q Consensus       315 -----~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~------~~~~~~~i~~~~~  383 (457)
                           .++..++++.++++.+.++.++   +..++.+++.+++.+.|++   ++++.+..+      ..++++++.++..
T Consensus       227 ~~~~~g~~~~~~~~~~a~~~~~~~~l~---~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (388)
T 1b9h_A          227 FHKIAGSNMRLNEFSASVLRAQLARLD---EQIAVRDERWTLLSRLLGA---IDGVVPQGGDVRADRNSHYMAMFRIPGL  300 (388)
T ss_dssp             CCCSCCCBCBCBHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHT---STTCEECCCCTTCCBCCCSEEEEECTTC
T ss_pred             eeecccccCCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc---CCCccccCCCcCCCccceEEEEEEeCCc
Confidence                 0111257777776666665543   3677888899999999988   457776542      2357888887643


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------C----------------CCCeEEEEecCCC-CHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------K----------------QKPSIRITCNISH-TEQDMN  438 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------~----------------~~~~lRi~~~~~~-t~edi~  438 (457)
                      .     .....++.+.|.++||.+++...|....+        .                ....+||+++..+ |++||+
T Consensus       301 ~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~  375 (388)
T 1b9h_A          301 T-----EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELH  375 (388)
T ss_dssp             C-----HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHH
T ss_pred             C-----cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHH
Confidence            1     01356789999999999987544321000        0                0236999999999 999999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        439 SLIETLCKSHDI  450 (457)
Q Consensus       439 ~~~~~l~~~~~~  450 (457)
                      +++++|+++++.
T Consensus       376 ~~~~~l~~~~~~  387 (388)
T 1b9h_A          376 ATAEIIADAVAR  387 (388)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999998764

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.96  E-value=9.2e-28  Score=237.95  Aligned_cols=326  Identities=12%  Similarity=0.102  Sum_probs=235.8

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      ++|+||.++.+. +  .|++.+++.+++.+..         |+..+...++++++++++|.+.++++++|++|+..++.+
T Consensus        30 ~~~id~~~~~~~-~--~~~v~~a~~~~~~~~~---------y~~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~   97 (399)
T 2oga_A           30 VPFLDLKAAYEE-L--RAETDAAIARVLDSGR---------YLLGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRG   97 (399)
T ss_dssp             BCSCCHHHHHHH-T--HHHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHH
T ss_pred             CcccccCcCCCC-C--CHHHHHHHHHHHhcCC---------CCCchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHH
Confidence            578998875431 2  2889999999987621         123466789999999999998899999999999999999


Q ss_pred             h-cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCC
Q psy15447        160 Y-VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSAD  232 (457)
Q Consensus       160 ~-~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~  232 (457)
                      + +++||.|++..+.|.++...++..|.++..++.      .|++++++.+++           ++++|++   .|++|.
T Consensus        98 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~---~n~tG~  163 (399)
T 2oga_A           98 LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITP-----------RTRALLP---VHLYGH  163 (399)
T ss_dssp             TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCT-----------TEEEECC---BCGGGC
T ss_pred             hCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCC-----------CCeEEEE---eCCcCC
Confidence            9 899999999999999999999999998887763      378888887743           3456663   467899


Q ss_pred             CCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC--cccEEEec-HHHHHHH
Q psy15447        233 ICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS--VGGFCVGS-SYIIEHH  307 (457)
Q Consensus       233 i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~--~gG~v~~~-~~~~~~~  307 (457)
                      +.|+++|.++|++||+++|+||+|++|... .+..    ++.   -.|+++.|+  +|++|+  .||+++++ +++++.+
T Consensus       164 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~----~~~---~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l  235 (399)
T 2oga_A          164 PADMDALRELADRHGLHIVEDAAQAHGARY-RGRR----IGA---GSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERL  235 (399)
T ss_dssp             CCCHHHHHHHHHHHTCEECEECTTCTTCEE-TTEE----TTC---TTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHH
T ss_pred             ccCHHHHHHHHHHcCCEEEEECcccccCcc-CCee----ccc---ccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHH
Confidence            999999999999999999999999876432 2221    221   127999999  699976  56888875 7887766


Q ss_pred             HhhC-Ccc---------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-CC-Ce
Q psy15447        308 RLSG-SGY---------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-DT-PL  375 (457)
Q Consensus       308 ~~~~-~~~---------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~~-~~  375 (457)
                      +... .+.         .+...++++.++++.++++.+++   ..++.+++.+++.+.|++   ++++.+...+ .+ ++
T Consensus       236 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~  309 (399)
T 2oga_A          236 RMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDS---WNGRRSALAAEYLSGLAG---LPGIGLPVTAPDTDPV  309 (399)
T ss_dssp             HHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHHHTTT---CTTCBCCCCCTTEECC
T ss_pred             HHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc---CCCccccCCCCCCcce
Confidence            4321 111         12224688888888888876643   567778889999999987   4566553222 11 11


Q ss_pred             -EEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc-Cccc------cCC-----------CCCeEEEEecCCCCHHH
Q psy15447        376 -KYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH-LDQE------AKK-----------QKPSIRITCNISHTEQD  436 (457)
Q Consensus       376 -~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~------~~~-----------~~~~lRi~~~~~~t~ed  436 (457)
                       +.+.+...        ...++.+.|.++||.+++... +...      ...           ..+.+||+++..+|++|
T Consensus       310 ~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~ed  381 (399)
T 2oga_A          310 WHLFTVRTE--------RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQ  381 (399)
T ss_dssp             CSSEEEECS--------SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHH
T ss_pred             eEEEEEECC--------CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHH
Confidence             11222222        235788999999999976321 1000      000           02579999999999999


Q ss_pred             HHHHHHHHHHHHHHhcC
Q psy15447        437 MNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       437 i~~~~~~l~~~~~~~~~  453 (457)
                      +++++++|+++++++.+
T Consensus       382 i~~~~~~l~~~~~~l~~  398 (399)
T 2oga_A          382 ALRVIDAVREWAERVDQ  398 (399)
T ss_dssp             HHHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999887654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.96  E-value=9.6e-27  Score=229.58  Aligned_cols=287  Identities=14%  Similarity=0.111  Sum_probs=215.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+..+++++|++|+..+++++.++||.|++..+.|.+....+    ...|.++..++.+|+++
T Consensus        50 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~  129 (386)
T 1cs1_A           50 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA  129 (386)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHH
T ss_pred             CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHH
Confidence            35677899999999999888899999999999999999999999999999998765543    56688999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+....   ..  .     .+
T Consensus       130 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~---~~--~-----~~  188 (386)
T 1cs1_A          130 LRAALAE-----------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN---PL--A-----LG  188 (386)
T ss_dssp             HHHHHHT-----------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---GG--G-----GT
T ss_pred             HHHhhcc-----------CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---cc--c-----cC
Confidence            9999863           45788899999999999999999999999999999999998764421   11  1     23


Q ss_pred             ccEEEecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|++|++    ||++++++ ++++.++.....  ++.+.+++.++++.++++.+.   +..+++.++.+++.
T Consensus       189 ~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~l~  263 (386)
T 1cs1_A          189 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN--IGVTGGAFDSYLLLRGLRTLV---PRMELAQRNAQAIV  263 (386)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHH--HTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             ceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhcccHHH---HHHHHHHHHHHHHH
Confidence            489999999999743    38888875 788877654322  334468888877777765442   35677888888888


Q ss_pred             HHhhcccccCCeEEec-----------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc-----
Q psy15447        354 SLLSQHKVTQRFLVQG-----------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS-----  411 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----  411 (457)
                      +.|+++   +.+.-..                 ...++++.+.+.+.         ...+.+.|.++||+++...     
T Consensus       264 ~~l~~~---~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~gi~~~~~~~g~~~  331 (386)
T 1cs1_A          264 KYLQTQ---PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD---------EQTLRRFLGGLSLFTLAESLGGVE  331 (386)
T ss_dssp             HHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC---------HHHHHHHHHTCSSSEEBSCCCSSS
T ss_pred             HHHhcC---CCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC---------HHHHHHHHHhCCcceEcccCCCcc
Confidence            888773   3322110                 12377888877643         2356677778899887421     


Q ss_pred             ----cCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        412 ----HLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       412 ----~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                          +|..    .        ....++.+|++++...++++++.+.++|+++
T Consensus       332 sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA  383 (386)
T ss_dssp             CEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             eeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence                1110    0        0112579999999988899999988888765

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.96  E-value=6.3e-27  Score=231.17  Aligned_cols=287  Identities=15%  Similarity=0.153  Sum_probs=219.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++++++++|.+.+++++||++|+..++++++++||.|++..+.|+++...+    ...|.++..++.+|+++
T Consensus        64 ~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~  143 (392)
T 3qhx_A           64 GNPTRTALEAALAAVEDAAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDA  143 (392)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHH
Confidence            46778999999999999999999999999999999999999999999999998877665    56688999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+....       ..+   .+
T Consensus       144 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~~~-------~~~---~~  202 (392)
T 3qhx_A          144 VRAAIRP-----------TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPALQQ-------PLS---LG  202 (392)
T ss_dssp             HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC-------GGG---GT
T ss_pred             HHHhhCC-----------CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcccccCC-------hHH---hC
Confidence            9988853           56889999999999999999999999999999999999997553321       112   23


Q ss_pred             ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|.+|+.    +|+++++ +++.+.++....  .++...+|+.++++++.++.+.   ..+++..++.+++.
T Consensus       203 ~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~~~~~~~~~~~~l~  277 (392)
T 3qhx_A          203 ADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQN--GAGAVPGPFDAYLTMRGLKTLV---LRMQRHSENAAAVA  277 (392)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHHH
Confidence            489999999999753    6888887 577777654332  2344568888888877766543   35678888888999


Q ss_pred             HHhhcccccCCeEEecc-----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-
Q psy15447        354 SLLSQHKVTQRFLVQGH-----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-  415 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~-----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-  415 (457)
                      +.|++   .+.+..+..                 ..+.++++.++.+.      ....++.+.|...|+.+..+..... 
T Consensus       278 ~~L~~---~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~------~~~~~~~~~l~~~~~~~s~G~~~sl~  348 (392)
T 3qhx_A          278 EFLAE---HPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR------TAAEQLCAKTNIFILAESLGSVESLI  348 (392)
T ss_dssp             HHHHT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH------HHHHHHHHHCSSSEECSCCCCSSCEE
T ss_pred             HHHhc---CCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH------HHHHHHHHhCCCceECCCCCCCCcee
Confidence            99887   344432211                 12668889887642      1556777777777777665443211 


Q ss_pred             ---------c-----cCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        416 ---------E-----AKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       416 ---------~-----~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                               .     ....++.+||+++...++++++.+.++|
T Consensus       349 ~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al  391 (392)
T 3qhx_A          349 EHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL  391 (392)
T ss_dssp             ECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred             eCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence                     0     0123678999999888888888777765

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.96  E-value=1.1e-26  Score=231.96  Aligned_cols=290  Identities=14%  Similarity=0.088  Sum_probs=220.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+..++++||++|+..++.+++++||.|++..+.|+++...    +...|.++..++.+|+++
T Consensus       112 ~~~~~~~l~~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~  191 (445)
T 1qgn_A          112 GNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGA  191 (445)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHH
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence            4678899999999999998899999999999999999999999999999999887764    455689999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++          .++++|++|+++|++|.+.|+++|.++|++||+++|+||+|+.+....       ...   .+
T Consensus       192 l~~ai~~----------~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~-------~~~---~g  251 (445)
T 1qgn_A          192 LELALNQ----------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK-------ALA---LG  251 (445)
T ss_dssp             HHHHHHH----------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC-------TTT---TT
T ss_pred             HHHHhcc----------CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCC-------ccc---cC
Confidence            9999874          223799999999999999999999999999999999999997654321       111   24


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +|+++.|++|.+|+.    +|++++++++++.+....  ..+++..+|+.++.+++.++.+.   .++++..++.+++.+
T Consensus       252 ~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~--~~~g~~~~~~~a~~~~~~l~~l~---~r~~~~~~~a~~l~~  326 (445)
T 1qgn_A          252 ADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLH--HILGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAE  326 (445)
T ss_dssp             CSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHGGGHH---HHHHHHHHHHHHHHH
T ss_pred             CEEEEECCcccccccccceEEEEEECHHHHHHHHHHH--HHhCCCCCHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHH
Confidence            589999999999753    799999998888775432  23455568887777766665443   356777788889999


Q ss_pred             HhhcccccCCe-EEecc----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc--
Q psy15447        355 LLSQHKVTQRF-LVQGH----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ--  415 (457)
Q Consensus       355 ~L~~~~~~~~~-~~~~~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~--  415 (457)
                      .|++   .+++ .+..+                ..+.++.+.++...      ....++.+.|...++.++.+..++.  
T Consensus       327 ~L~~---~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~------~~~~~~l~~l~~~~i~~s~G~~~sl~~  397 (445)
T 1qgn_A          327 ILEA---HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL------LTTAKFVDALKIPYIAPSFGGCESIVD  397 (445)
T ss_dssp             HHHT---CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH------HHHHHHHHHCSSSEECSCCCSSSCEEE
T ss_pred             HHhc---CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH------HHHHHHHHhCCCceEeccCCCCceeee
Confidence            9988   4555 33222                24778899887642      1355666666544666555443321  


Q ss_pred             ----------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        416 ----------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       416 ----------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                                      .....++.+|+++.    .||++++++.|+++++.
T Consensus       398 ~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~  444 (445)
T 1qgn_A          398 QPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS  444 (445)
T ss_dssp             CHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred             cccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence                            01122479999997    46899999999988764

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.96  E-value=1.3e-27  Score=244.61  Aligned_cols=338  Identities=11%  Similarity=0.055  Sum_probs=237.7

Q ss_pred             EEeecCCccCCC--CChhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcCCC----cE--EEecccHHHH
Q psy15447         83 INFATHNYLSFV--ENPDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMGLE----ET--ALYSFGFSTS  153 (457)
Q Consensus        83 id~~s~~~l~~~--~~p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~--i~~~sG~~a~  153 (457)
                      +++.++.++|..  .++.+.+++.+++..+.. ....+....+......++++++++++|.+    .+  +++++|++|+
T Consensus        94 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~  173 (514)
T 3mad_A           94 PAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESL  173 (514)
T ss_dssp             HHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHH
T ss_pred             CCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHH
Confidence            445556666643  457788888777765432 11122223344566677888889999966    55  8889999999


Q ss_pred             HHHHHhhcCCC--------CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        154 ASAIAAYVKRN--------DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       154 ~~ai~a~~~~g--------d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ..+++++++++        |.|+++.+.|.++..+++..|.+++.++.+     |+++|++.+++           ++++
T Consensus       174 ~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~-----------~~~~  242 (514)
T 3mad_A          174 LLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADYRADVAAMREAITP-----------NTVV  242 (514)
T ss_dssp             HHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCT-----------TEEE
T ss_pred             HHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhcc-----------CCEE
Confidence            99999987766        899999999999999999999999988866     89999988853           4678


Q ss_pred             EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCcccc-cC-ccc
Q psy15447        221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GS-VGG  295 (457)
Q Consensus       221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~-~gG  295 (457)
                      |++++++|++|.+.|+++|+++|++||++||+||+|+.+.+   +..|.... .+.....++|+++.|++|++ ++ ..|
T Consensus       243 v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~-~~~~~~~g~d~~~~s~~K~l~~~~~~g  321 (514)
T 3mad_A          243 VAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVP-PFDFRLEGVTSVSADTHKYGYGAKGTS  321 (514)
T ss_dssp             EEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCC-CCSTTSTTCCEEEECTTTTTCCCSSCE
T ss_pred             EEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCC-cccccCCCCcEEEECchhccCCCCCeE
Confidence            99999999999999999999999999999999999986544   22222111 12222346789999999996 33 347


Q ss_pred             EEEecHHHHHHHHhh-CC--------cceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447        296 FCVGSSYIIEHHRLS-GS--------GYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQR  364 (457)
Q Consensus       296 ~v~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~  364 (457)
                      +++.+++........ ..        ...+.++.+....++..++++.+..  .+++.++++++++++.+.|++   +++
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~---~~g  398 (514)
T 3mad_A          322 VILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA---IPS  398 (514)
T ss_dssp             EEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STT
T ss_pred             EEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh---CCC
Confidence            776666544332110 00        0111223333333344444544433  245788899999999999998   568


Q ss_pred             eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHH
Q psy15447        365 FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIET  443 (457)
Q Consensus       365 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~  443 (457)
                      +++..++ ..++++.....        ...++.+.|.++||.+....+        ++.+|++++ ...+++++++++++
T Consensus       399 ~~~~~~~-~~~~~~~~~~~--------~~~~l~~~L~~~Gi~v~g~~~--------~~~~Ri~~~~~~~~~e~i~~~l~~  461 (514)
T 3mad_A          399 LKILGDP-LWVIAVASDEL--------NIYQVMEEMAGRGWRLNGLHR--------PPAFHVALTLRHTEPGVVDRFLAD  461 (514)
T ss_dssp             CEESSCC-SSEEEEECSSS--------CHHHHHHHHHTTTCBCEEETT--------TTEEEEECCGGGGSTTHHHHHHHH
T ss_pred             eEEeCCC-eEEEEEeCCCC--------CHHHHHHHHHhcCCEeccCCC--------CCeEEEEEecCCCCHHHHHHHHHH
Confidence            8876444 45666655332        345799999999998843322        468999997 44567999999999


Q ss_pred             HHHHHHHhc
Q psy15447        444 LCKSHDIAV  452 (457)
Q Consensus       444 l~~~~~~~~  452 (457)
                      |+++++++.
T Consensus       462 L~~~l~~~~  470 (514)
T 3mad_A          462 LQDAVAQVR  470 (514)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998775

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.96  E-value=5.1e-27  Score=233.74  Aligned_cols=338  Identities=11%  Similarity=0.106  Sum_probs=224.0

Q ss_pred             eeEEeecC-CccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHH----HHHHHhhcCCCcE-EEecccHHHH
Q psy15447         81 PCINFATH-NYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDL----ENDIASFMGLEET-ALYSFGFSTS  153 (457)
Q Consensus        81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sG~~a~  153 (457)
                      +.+++.++ +++    +|++.+++.+++ ..++.++.+++. ++......++    ++.+++++|.+.. +++++|++|+
T Consensus        26 ~~i~l~~~~~~~----~~~v~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~i~~~sGt~a~  100 (417)
T 3n0l_A           26 EGLEMIASENFT----LPEVMEVMGSILTNKYAEGYPGKRY-YGGCEFVDEIETLAIERCKKLFNCKFANVQPNSGSQAN  100 (417)
T ss_dssp             HSEECCTTCCCC----CHHHHHHHTBGGGGCCCCEETTEES-SSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred             cCeeeecccCCC----CHHHHHHHhhhhhccccccCCCccc-cccchHHHHHHHHHHHHHHHHhCCCCcceEeccHHHHH
Confidence            35665443 442    799999999988 444433333332 2233444444    4488999998866 8889999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHH---HHHhcC--CeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQT---GLIASR--CKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~---~~~~~g--~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      ..++++++++||.|++..+.|.+...   .....|  ..+..++.     .|++++++.+++.          ++++|++
T Consensus       101 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~  170 (417)
T 3n0l_A          101 QGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKE----------KPKLIVC  170 (417)
T ss_dssp             HHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred             HHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhc----------CCeEEEE
Confidence            99999999999999999998876543   223333  33444443     4899999998742          2356666


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-H
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-S  301 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~  301 (457)
                      .+++  .|.+.|+++|+++|++||++||+||+|+.|.... +.    .... ....|+++.|+||+++ ..||+++++ +
T Consensus       171 ~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~-~~----~~~~-~~~~di~~~s~sK~l~g~~~G~~~~~~~  242 (417)
T 3n0l_A          171 GASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVVA-GE----HPSP-FPYAHVVSSTTHKTLRGPRGGIIMTNDE  242 (417)
T ss_dssp             CCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-TS----SCCC-TTTCSEEEEESSTTTCSCSCEEEEESCH
T ss_pred             CCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhhc-cc----CCCc-cccceEEEeeCccccCCCCeeEEEECCH
Confidence            5544  3889999999999999999999999987665422 11    1111 1245899999999994 558999998 7


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEE
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYL  378 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i  378 (457)
                      ++++.++....... +++.++..+++..+++....  ..++++++++++.+++.+.|++    .|+.+... ..++++++
T Consensus       243 ~~~~~~~~~~~~~~-~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~  317 (417)
T 3n0l_A          243 ELAKKINSAIFPGI-QGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD----RKFKLVSDGTDNHLVLM  317 (417)
T ss_dssp             HHHHHHHHHHTTTT-CSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEE
T ss_pred             HHHHHHhhhhCCcc-cCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh----CCceeccCCCCceEEEE
Confidence            88887765432222 22345555555555655432  2246778888999999999988    67776532 34667777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+.....      ....+.+.|.++||.+.+...|.. ..+...+.+|++++.    .++++|+++++++|+++++...
T Consensus       318 ~~~~~~~------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~  390 (417)
T 3n0l_A          318 SFLDREF------SGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVN  390 (417)
T ss_dssp             ECTTSSS------CHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred             EcccCCC------CHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhccc
Confidence            7653210      245677888889999987654422 112234679998763    3679999999999999987653

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.96  E-value=2e-27  Score=238.92  Aligned_cols=343  Identities=13%  Similarity=0.123  Sum_probs=226.1

Q ss_pred             eeEEeecC-CccCCCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHH--HHHH-HHHHhhcCCCcEEE-ecccHHHHH
Q psy15447         81 PCINFATH-NYLSFVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVH--LDLE-NDIASFMGLEETAL-YSFGFSTSA  154 (457)
Q Consensus        81 ~~id~~s~-~~l~~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~--~~l~-~~la~~~g~~~~i~-~~sG~~a~~  154 (457)
                      ..|++.++ ++   . +|++.+|+.+++. .|+.++.+++...|.....  ++++ +++++++|.+.+.+ ++||++|+.
T Consensus        46 ~~i~l~~~~~~---~-~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~~~~~v~~~sGs~a~~  121 (447)
T 3h7f_A           46 DTLEMIASENF---V-PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGAEFANVQPHSGAQANA  121 (447)
T ss_dssp             HSEECCTTCCC---C-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHH
T ss_pred             CceeEecCCCC---C-CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCCCceEEEeCCHHHHHH
Confidence            45666543 33   2 7999999999885 5655544444444443333  5566 99999999988776 899999999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHH-HHHHH--Hh--cCCeEEEec------CCCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        155 SAIAAYVKRNDAVFVDENINFA-IQTGL--IA--SRCKVQYFK------HNNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~-~~~~~--~~--~g~~~~~~~------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      .++++++++||.|++..+.|.+ ...+.  ..  .+..+..++      ..|++++++.+++.          ++++|++
T Consensus       122 ~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~i~~  191 (447)
T 3h7f_A          122 AVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEF----------RPKVIIA  191 (447)
T ss_dssp             HHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHH----------CCSEEEE
T ss_pred             HHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhc----------CCeEEEE
Confidence            9999999999999999988765 21111  11  123444444      35899999998652          2346667


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHH
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSY  302 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~  302 (457)
                      +.+.++++.  ++++|+++|++||++||+||+|..|... .|.    +.+.. ..+|+++.|+||+++ ..||+++++++
T Consensus       192 ~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~-~g~----~~~~~-~~~di~~~s~sK~l~G~~gG~i~~~~~  263 (447)
T 3h7f_A          192 GWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVA-AGL----HPSPV-PHADVVSTTVHKTLGGGRSGLIVGKQQ  263 (447)
T ss_dssp             ECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHH-TTS----SCCST-TTCSEEEEESSGGGCCCSCEEEEECGG
T ss_pred             cCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhc-CCC----CCCCC-CCCcEEEecCCcCCCCCCeEEEEECHH
Confidence            555555544  9999999999999999999998766432 111    11111 245899999999996 67899999998


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcc-cccCCeEEecc-CCCCeEEE
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGH-RDTPLKYL  378 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~~i  378 (457)
                      +++.+.....++.+++..++ .++++.+++....+  .+++.+++.++++++.+.|++. ...+|+++... ..++++++
T Consensus       264 ~~~~l~~~~~~~~~~~~~~~-~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~  342 (447)
T 3h7f_A          264 YAKAINSAVFPGQQGGPLMH-VIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLV  342 (447)
T ss_dssp             GHHHHHHHHTTTTCSSCCHH-HHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEE
T ss_pred             HHHHHhhhcCCcccCCccHH-HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEE
Confidence            88887665444444443333 33444444443322  2457788999999999999881 00027777532 45677777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEecCC----CCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCNIS----HTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~~~----~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .+.....      ....+.+.|.++||++.....|.. ..+..++.+|++++..    +|++|+++++++|+++++...
T Consensus       343 ~~~~~~~------~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~  415 (447)
T 3h7f_A          343 DLRDSPL------DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGS  415 (447)
T ss_dssp             ECTTSSC------CHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGG
T ss_pred             EcCCCCC------CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccC
Confidence            7653210      233455666677999883211110 0023357899998654    689999999999999987653

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.96  E-value=1.5e-26  Score=235.26  Aligned_cols=341  Identities=12%  Similarity=0.086  Sum_probs=231.2

Q ss_pred             hhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcC-----CCcEEEecccHHHHHHHHHhhcCCCC----E
Q psy15447         97 PDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMG-----LEETALYSFGFSTSASAIAAYVKRND----A  166 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~~~i~~~sG~~a~~~ai~a~~~~gd----~  166 (457)
                      .++.+++.+.+++.+. ....+....|..+++.++++.+.+..|     .+.+++++++++++..++.+++++||    .
T Consensus       104 ~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~  183 (498)
T 3ihj_A          104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTG  183 (498)
T ss_dssp             HHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEE
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCE
Confidence            3455777888887542 223344445667777777777777664     34677778888999999999998875    9


Q ss_pred             EEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---h
Q psy15447        167 VFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---L  236 (457)
Q Consensus       167 v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l  236 (457)
                      |+++.+.|..+...++..|.+++.++.+       |+++|++.+++...      ..++++|++.+++||+|.+.+   +
T Consensus       184 Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~------~~~~k~i~l~np~NPTG~v~s~~~l  257 (498)
T 3ihj_A          184 VMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKD------HCDPKVLCIINPGNPTGQVQSRKCI  257 (498)
T ss_dssp             EEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTT------TSEEEEEEEESSCTTTCCCCCHHHH
T ss_pred             EEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhc------cCCCeEEEEECCCCCCCCcCCHHHH
Confidence            9999999999999999999999888765       89999999976421      014577777799999999988   6


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCC--CCcccccc-CCCC---CC-ccEEEecCcccc-c---CcccEEE---ecHH
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYF-GVST---EE-VDMIIGSLEHAL-G---SVGGFCV---GSSY  302 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~-~~~~---~~-~Di~~~s~sK~l-g---~~gG~v~---~~~~  302 (457)
                      ++|+++|++||+++|+||+|+.+.++..  ...+.... +..+   ++ ..|+++|+||++ |   ..+||++   ++++
T Consensus       258 ~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~  337 (498)
T 3ihj_A          258 EDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPE  337 (498)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHH
T ss_pred             HHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHH
Confidence            7899999999999999999988777532  11111110 0000   11 137889999999 4   3459987   6888


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHH-----------HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALH-----------LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR  371 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-----------~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~  371 (457)
                      +++.+.....  .+. ..+.+..+++.++++           .+++.++++++++++++++.+.|++   ++|+.+..+.
T Consensus       338 l~~~l~~~~~--~~~-~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~---~~g~~~~~p~  411 (498)
T 3ihj_A          338 IKGQLVKLLS--VRL-CPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ---VPGIHCNPLQ  411 (498)
T ss_dssp             HHHHHHHHHH--HSC-CCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCCC
T ss_pred             HHHHHHHHHh--ccC-CCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCcEecCCC
Confidence            8888765432  111 234444444444432           2333345678899999999999988   5688887555


Q ss_pred             CCCeEEEEecCCcch-HHH---HHHHHH--HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        372 DTPLKYLYLQKSDDE-VAS---KKLLQT--ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       372 ~~~~~~i~~~~~~~~-~~~---~~~~~~--~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .+.+.++.+..+... ...   ......  +.+.|.++||++.++..+..  ..+.+++|+++.  ++++++++++++|+
T Consensus       412 gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~--~~~~~~~Ris~~--~~~e~l~~~i~~L~  487 (498)
T 3ihj_A          412 GAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ--REGTYHFRMTIL--PPVEKLKTVLQKVK  487 (498)
T ss_dssp             BSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC--CTTCCBEEEECC--SCHHHHHHHHHHHH
T ss_pred             eEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--CCCCCEEEEEeC--CCHHHHHHHHHHHH
Confidence            555666555433210 000   001122  24445567999998776532  234579999994  79999999999999


Q ss_pred             HHHHHhcC
Q psy15447        446 KSHDIAVQ  453 (457)
Q Consensus       446 ~~~~~~~~  453 (457)
                      +++++..+
T Consensus       488 ~~~~~~~~  495 (498)
T 3ihj_A          488 DFHINFLE  495 (498)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99887654

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.96  E-value=1e-27  Score=240.94  Aligned_cols=347  Identities=10%  Similarity=0.062  Sum_probs=226.4

Q ss_pred             eeeE-EeecCCccCCCCChhhHHHHHHHHHhcCCC-------CC--CCCCcccChHHHHHHHHHHHhhc--------CCC
Q psy15447         80 IPCI-NFATHNYLSFVENPDIEKCAIDCIDKNGVG-------SC--GPRGFYGTNVVHLDLENDIASFM--------GLE  141 (457)
Q Consensus        80 ~~~i-d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~-------~~--~~~~~~g~~~~~~~l~~~la~~~--------g~~  141 (457)
                      ..+| ||+.+++..   .|.+.+++.+++.+....       +.  .....|+......++++.+|+++        ..+
T Consensus        31 ~~~i~~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~  107 (444)
T 3if2_A           31 DQPVNMLGGGNPAK---IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSE  107 (444)
T ss_dssp             SSCCEECSCCCCCC---CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred             chhhhccCCCCCCc---ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHH
Confidence            3577 887765422   366666666666553221       10  00112222333456666666665        345


Q ss_pred             cEEEecccHHHHHHHHHhhcCCCC--------------EEEEe-CcccHHHHHH------HHhcCCeEEEec--------
Q psy15447        142 ETALYSFGFSTSASAIAAYVKRND--------------AVFVD-ENINFAIQTG------LIASRCKVQYFK--------  192 (457)
Q Consensus       142 ~~i~~~sG~~a~~~ai~a~~~~gd--------------~v~~~-~~~h~~~~~~------~~~~g~~~~~~~--------  192 (457)
                      +++++++|++|+..++++++++||              .|++. .+.|..+...      +...+..+..++        
T Consensus       108 ~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  187 (444)
T 3if2_A          108 NIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFF  187 (444)
T ss_dssp             GEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEEEEE
T ss_pred             HEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEecccccccCcc
Confidence            788888999999999999998887              66653 6666655432      223455555554        


Q ss_pred             --CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc
Q psy15447        193 --HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG  267 (457)
Q Consensus       193 --~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~  267 (457)
                        ..|+++|++.+++..        +++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+..+....+
T Consensus       188 ~~~~d~~~l~~~l~~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~  259 (444)
T 3if2_A          188 KYRVDFEALENLPALKE--------GRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSD  259 (444)
T ss_dssp             EEECCHHHHHTCHHHHT--------TCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC
T ss_pred             ccCCCHHHHHHHHHhcC--------CCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccccccc
Confidence              248999998865432        35678888888999999999   88999999999999999999975322211111


Q ss_pred             cccccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCc-H
Q psy15447        268 VTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANP-S  340 (457)
Q Consensus       268 ~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~-~  340 (457)
                      ..    ....+.+++++|+||. +++   .||+++++++++.+......+.++  .+++.++++.+.++...   ... .
T Consensus       260 ~~----~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~  332 (444)
T 3if2_A          260 AH----LNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLA--PTRFGAAIATPLVANDRIKQLSDNE  332 (444)
T ss_dssp             CC----CCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSS--CCCHHHHHHHHHHHTSHHHHHHHHT
T ss_pred             cc----ccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCC--CChHHHHHHHHHHHcCchhHHHHHH
Confidence            10    0113457999999997 443   499999999998886544333333  35555555555544211   111 1


Q ss_pred             HHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc--
Q psy15447        341 LLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--  417 (457)
Q Consensus       341 ~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--  417 (457)
                      +++.++++.+.+.+.|.+.....++.+..+..+.++++.++. ..       ...++++.|.++||.+.++..+....  
T Consensus       333 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~~~~~~~~  405 (444)
T 3if2_A          333 IKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPI-------STLDLYERLKAKGTLIVPSEYFFPGVDV  405 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSS-------CHHHHHHHHHHTTEECEEGGGSCTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCC-------CHHHHHHHHHHCCeEEecchhhcCCCCC
Confidence            455667777777777755210125666655668888888875 33       34578889999999999876543210  


Q ss_pred             ---CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        418 ---KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       418 ---~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                         ....+++||+++.  |+++|++++++|+++++++.+
T Consensus       406 ~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~  442 (444)
T 3if2_A          406 SDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELYD  442 (444)
T ss_dssp             TTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHHc
Confidence               0123689999986  999999999999999987764

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.96  E-value=1e-26  Score=229.98  Aligned_cols=294  Identities=11%  Similarity=0.079  Sum_probs=219.9

Q ss_pred             HHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC-----C
Q psy15447        125 VVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH-----N  194 (457)
Q Consensus       125 ~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~-----~  194 (457)
                      +...++++.+++++|.+   .++++++|++|+..++.++.++||.|++..+.|.++.  ..++..|.+++.++.     .
T Consensus        51 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~  130 (396)
T 2ch1_A           51 RTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRPF  130 (396)
T ss_dssp             HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSCC
T ss_pred             HHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCCCCC
Confidence            45789999999999965   3566778889999999999999999999999888864  366778888887773     5


Q ss_pred             CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCC
Q psy15447        195 NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGV  274 (457)
Q Consensus       195 d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~  274 (457)
                      |++++++.+++.          ++++|++++++|++|.+.|+++|.++|++||+++|+||+|++|...         .++
T Consensus       131 d~~~l~~~l~~~----------~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~---------~~~  191 (396)
T 2ch1_A          131 SLETLARAIELH----------QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP---------FYM  191 (396)
T ss_dssp             CHHHHHHHHHHH----------CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC---------CCT
T ss_pred             CHHHHHHHHHhC----------CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCc---------cch
Confidence            899999988641          3468888999999999999999999999999999999999865321         112


Q ss_pred             CCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhC---Cc------------------ceecCCCcHHHHHHHHHH
Q psy15447        275 STEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSG---SG------------------YCFSASLPPFLAVAANKA  331 (457)
Q Consensus       275 ~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~---~~------------------~~~~~~~~~~~~aaa~a~  331 (457)
                      ...++|+++.|++|++++ .| |+++.++++++.+....   ..                  ....++.+...++++.++
T Consensus       192 ~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a  271 (396)
T 2ch1_A          192 DKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREA  271 (396)
T ss_dssp             TTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHH
T ss_pred             hhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHH
Confidence            223458989999998853 33 78889988888765321   00                  011223566677777778


Q ss_pred             HHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-C
Q psy15447        332 LHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-G  404 (457)
Q Consensus       332 l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-G  404 (457)
                      ++.+.+  .++.+++++++++++.+.|++    .|+.+..+..    +.++++.++...       ...++.+.|.++ |
T Consensus       272 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~L~~~~g  340 (396)
T 2ch1_A          272 LAQIAEEGLENQIKRRIECAQILYEGLGK----MGLDIFVKDPRHRLPTVTGIMIPKGV-------DWWKVSQYAMNNFS  340 (396)
T ss_dssp             HHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCBSSCSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHHC
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHHH----CCCeeccCCccccCCceEEEEcCCCC-------CHHHHHHHHHHhCC
Confidence            876532  245778899999999999988    3666543322    236777775332       345788999876 9


Q ss_pred             eeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        405 FAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       405 i~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      |.++++..+     ...+++|+++ +..+|++|+++++++|+++++++..
T Consensus       341 i~v~~g~~~-----~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~  385 (396)
T 2ch1_A          341 LEVQGGLGP-----TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP  385 (396)
T ss_dssp             BCCBCCCGG-----GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEEecCccc-----cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence            999875431     2357899999 6677999999999999999987753

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.96  E-value=8.7e-27  Score=229.37  Aligned_cols=288  Identities=16%  Similarity=0.130  Sum_probs=211.3

Q ss_pred             HHHHHHHHHHhhcCC------CcEEEecccHHHHHHHHHhhc---CCCCEEEEe-CcccHHH-HHHHHhcCCeEEEecC-
Q psy15447        126 VHLDLENDIASFMGL------EETALYSFGFSTSASAIAAYV---KRNDAVFVD-ENINFAI-QTGLIASRCKVQYFKH-  193 (457)
Q Consensus       126 ~~~~l~~~la~~~g~------~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~-~~~h~~~-~~~~~~~g~~~~~~~~-  193 (457)
                      ...+++++++++++.      +.++++++|++|+..++.++.   ++||.|++. .+++... ...++..|.+++.++. 
T Consensus        39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~  118 (385)
T 2bkw_A           39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL  118 (385)
T ss_dssp             HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS
T ss_pred             HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC
Confidence            456788888888775      356777889999999999987   899987665 4444433 4667778989888876 


Q ss_pred             -----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCC
Q psy15447        194 -----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGH  266 (457)
Q Consensus       194 -----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~  266 (457)
                           .|++++++.+++          .++++|++++++|++|.+.|+++|.++|++|  |+++|+||+|++|...    
T Consensus       119 ~~~~~~d~~~l~~~l~~----------~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~----  184 (385)
T 2bkw_A          119 KIGESVPLELITEKLSQ----------NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE----  184 (385)
T ss_dssp             STTSCCCHHHHHHHHHH----------SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSC----
T ss_pred             CCCCCCCHHHHHHHHhc----------CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcc----
Confidence                 378999998864          2356888999999999999999999999999  9999999999865321    


Q ss_pred             ccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHH-HHHh----------------------hCCc-ceecCCC
Q psy15447        267 GVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIE-HHRL----------------------SGSG-YCFSASL  320 (457)
Q Consensus       267 ~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~-~~~~----------------------~~~~-~~~~~~~  320 (457)
                           .++...++|+++.|++|+++ +.| |+++++++.++ .++.                      ...+ ..+.++.
T Consensus       185 -----~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (385)
T 2bkw_A          185 -----FEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATP  259 (385)
T ss_dssp             -----CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCC
T ss_pred             -----ccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCC
Confidence                 11222245899999999885 455 89999887766 4310                      0000 0112345


Q ss_pred             cHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHh-hcccccCCeEEecc-----CCCCeEEEEecCCcchHHHHHH
Q psy15447        321 PPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLL-SQHKVTQRFLVQGH-----RDTPLKYLYLQKSDDEVASKKL  392 (457)
Q Consensus       321 ~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L-~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~~~~  392 (457)
                      ++..++++.++++.+.+.  ++.+++++++++++.+.| ++   + ++.+..+     ..++++++.+++          
T Consensus       260 ~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~-g~~~~~~~~~~~~~~~~~~~~~~~----------  325 (385)
T 2bkw_A          260 PVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNG---L-QLTSVSRYPSNMSAHGLTAVYVAD----------  325 (385)
T ss_dssp             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTT---T-CCEESSCSSSTTBCSSCEEEECSC----------
T ss_pred             CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHh---c-CceecccCcccccCCceEEEecCC----------
Confidence            777777777888776532  456788999999999999 87   3 7776532     246778887653          


Q ss_pred             HHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE-ec---CCCCHHHHHHHHHHHHHHHHH
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT-CN---ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~-~~---~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..++.+.|.++||.+.++..+    ....+.+|++ ++   ..+|++|+++++++|++++++
T Consensus       326 ~~~~~~~l~~~gi~v~~g~~~----~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          326 PPDVIAFLKSHGVVIAGGIHK----DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             HHHHHHHHHHTTEECBCCCCT----TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHCCeEEeCCCCc----ccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence            246888899999999876432    1234789999 55   257999999999999988654

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.96  E-value=2.9e-28  Score=240.96  Aligned_cols=328  Identities=12%  Similarity=0.045  Sum_probs=222.7

Q ss_pred             CeeeEEeecCCccCC----CCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C----CCcEEE--ec
Q psy15447         79 GIPCINFATHNYLSF----VENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G----LEETAL--YS  147 (457)
Q Consensus        79 G~~~id~~s~~~l~~----~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g----~~~~i~--~~  147 (457)
                      |.+++||+++.|++.    ..+|.+.+++.+++++...  .+    |+......++++.+++++ +    .+++++  ++
T Consensus        25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~----y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~   98 (394)
T 2ay1_A           25 RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETT--KT----YAGLSGEPEFQKAMGELILGDGLKSETTATLATV   98 (394)
T ss_dssp             CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC--CC----CCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEE
T ss_pred             CccccccccceeeCCCCCccCcHHHHHHHHHhcCCccc--CC----CCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecC
Confidence            567899999887543    3468999999988865211  11    112222466777777765 4    356677  88


Q ss_pred             ccHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCCCCcc
Q psy15447        148 FGFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       148 sG~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      +|++|+..+++++..  +||.|++..++|..+...+...|.++..++.   +    |++++++.+++..        +.+
T Consensus        99 g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~  170 (394)
T 2ay1_A           99 GGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK--------KGD  170 (394)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC--------TTC
T ss_pred             CchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHHHHHHHHHhCC--------CCC
Confidence            899999999887754  8999999999999988888888988888776   3    7899999887531        245


Q ss_pred             EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcc
Q psy15447        219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      +++++++++||+|.+.|   +++|+++|++||+++|+||+|+.+.++..... ....+....++ +++++|+||++|.+|
T Consensus       171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G  249 (394)
T 2ay1_A          171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPE-VLIAASCSKNFGIYR  249 (394)
T ss_dssp             EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSS-EEEEEECTTTTTCGG
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCC-EEEEEeccCCCcCcC
Confidence            77888999999999987   56889999999999999999986544210011 11111110112 488999999998666


Q ss_pred             ---cEEEe---cHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        295 ---GFCVG---SSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       295 ---G~v~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                         ||+++   ++++++.+....   ....++ +.+++.++++.++++..       +..++++++++++.+++.+.|++
T Consensus       250 ~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  328 (394)
T 2ay1_A          250 ERTGCLLALCADAATRELAQGAMAFLNRQTYS-FPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRD  328 (394)
T ss_dssp             GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccceEEEEeCCHHHHHHHHHHHHHHHhhhcC-CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               89887   665544332110   111222 23667777777776533       12245678888889999998887


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      +....++.+..+..+.++++.+.  .         ..+.+.|.++||++.+             .+|++++ .+|++|++
T Consensus       329 ~~~~~~~~~~~~~~g~~~~~~~~--~---------~~~~~~l~~~gi~v~~-------------~~Ris~~-~~~~~~i~  383 (394)
T 2ay1_A          329 LSGSDRFGFVAEHRGMFSRLGAT--P---------EQVKRIKEEFGIYMVG-------------DSRINIA-GLNDNTIP  383 (394)
T ss_dssp             HHTSSTTTHHHHCCSSEEECCCC--H---------HHHHHHHHHHCEECCT-------------TCEEEGG-GCCTTTHH
T ss_pred             cCCCCCeeEEcCCceEEEeeCCC--H---------HHHHHHHHhCCEEecC-------------CCeEEee-cCCHhhHH
Confidence            21000244443444666655332  1         2466667788998764             3699987 47999999


Q ss_pred             HHHHHHHHH
Q psy15447        439 SLIETLCKS  447 (457)
Q Consensus       439 ~~~~~l~~~  447 (457)
                      +++++|+++
T Consensus       384 ~~~~~l~~~  392 (394)
T 2ay1_A          384 ILARAIIEV  392 (394)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHc
Confidence            999999875

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.96  E-value=3.6e-27  Score=235.51  Aligned_cols=346  Identities=11%  Similarity=0.044  Sum_probs=230.0

Q ss_pred             eEEeecCCccC--CCCChhhHHHHH--HHHHhcCCCCCCCCCcc-cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         82 CINFATHNYLS--FVENPDIEKCAI--DCIDKNGVGSCGPRGFY-GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        82 ~id~~s~~~l~--~~~~p~i~~a~~--~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      .+||+.+.+-.  +..++++.+++.  +.++ .+..    ...| +......+|++.++++++.+  .+++++++++++.
T Consensus        27 ~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~-~~~~----~~~Yp~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~  101 (423)
T 3ez1_A           27 NLNMQRGQPADADFDLSNGLLTVLGAEDVRM-DGLD----LRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQ  101 (423)
T ss_dssp             CEESCCCCCCHHHHHTTGGGGGSCCGGGCEE-TTEE----TTSSCSCTTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHH
T ss_pred             eEecCCCCCChHhCCCcHHHHHHHhhhHHhh-cchh----hhCCCCCCCChHHHHHHHHHHhCCChhhEEEeCCcHHHHH
Confidence            57887654411  223456777764  3333 1211    1122 33344578999999998854  5666777778887


Q ss_pred             --HHHHhhcC--C---------CCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCc
Q psy15447        155 --SAIAAYVK--R---------NDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       155 --~ai~a~~~--~---------gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                        .++.+++.  +         ||.|++..++|..+...+...|.++..++.+    |++++++.+++.         ++
T Consensus       102 ~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~---------~~  172 (423)
T 3ez1_A          102 GLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTD---------PS  172 (423)
T ss_dssp             HHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHHSC---------TT
T ss_pred             HHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCCCCCHHHHHHHHhhC---------CC
Confidence              78888877  7         5999999999999999999999988877653    899999998631         34


Q ss_pred             cEEEEEe-cCCCCCCCCCChH---HHHHHH-HHcCcEEEEEcCcccccccC-CCCccccccCC----CCCCccEEEecCc
Q psy15447        218 KKFIIVE-GVYMNSADICPLK---DILSLR-SKYQARIFVDESVSFGTLGS-TGHGVTEYFGV----STEEVDMIIGSLE  287 (457)
Q Consensus       218 ~~~vi~e-~v~~~~G~i~~l~---~i~~l~-~~~g~~li~DEa~~~g~~g~-~g~~~~~~~~~----~~~~~Di~~~s~s  287 (457)
                      +++|++. +++||+|.+.|.+   +|+++| ++||+++|+||+|+...++. .+......+.+    ...+.+++++|||
T Consensus       173 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  252 (423)
T 3ez1_A          173 VKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTS  252 (423)
T ss_dssp             EEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEEST
T ss_pred             ceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCch
Confidence            5666654 7899999999966   888888 99999999999998544433 11111111111    1124469999999


Q ss_pred             ccc--cCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-H----hhCcHHHHHHHHHHHHHHHHhhc-c
Q psy15447        288 HAL--GSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL-L----KANPSLLTKLREKCNTMHSLLSQ-H  359 (457)
Q Consensus       288 K~l--g~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-~----~~~~~~~~~l~~~~~~l~~~L~~-~  359 (457)
                      |++  |.+.||+++++++++.++.......  .+.+++.++++.+.++. .    +...+.++.++++.+.+.+.|.+ +
T Consensus       253 K~~~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l  330 (423)
T 3ez1_A          253 KITFAGAGLGFVASSEDNIRWLSKYLGAQS--IGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAEL  330 (423)
T ss_dssp             TTSCSSSSCEEEEECHHHHHHHHHHHHHSC--SCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCcceEEEEeCHHHHHHHHHHHhhhc--cCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            974  2345999999999888865432222  23477776666666654 1    11122344455555555555433 1


Q ss_pred             cccC-CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec-cccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        360 KVTQ-RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC-PSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       360 ~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      .... ++.+..+..+.++++.+...        ....+.+.|.++||++++ +.++........+++||+++.. +++++
T Consensus       331 ~~~~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i  401 (423)
T 3ez1_A          331 GEGGEYATWTLPKGGYFISLDTAEP--------VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEV  401 (423)
T ss_dssp             TTTTSSEEECCCSBSSCEEEEESSS--------CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHH
T ss_pred             CcCCCceEEeCCCccEEEEEECCCC--------cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHH
Confidence            1122 37766566788888888754        234678889999999988 4332111112468999999765 99999


Q ss_pred             HHHHHHHHHHHHHhc
Q psy15447        438 NSLIETLCKSHDIAV  452 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~  452 (457)
                      ++++++|+++++++.
T Consensus       402 ~~~~~~l~~~l~~~~  416 (423)
T 3ez1_A          402 RTAMQVVAACIRLAT  416 (423)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999988764

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.96  E-value=4.1e-26  Score=227.46  Aligned_cols=318  Identities=14%  Similarity=0.105  Sum_probs=230.7

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN  174 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h  174 (457)
                      +|++.+++.+++++...+.  +....|..+...++++.+++++|.+.++++++|++|+..++.++ .++||.|++..+.|
T Consensus        15 ~~~~~~a~~~~~~~~~~~~--~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~   92 (418)
T 2c81_A           15 SDRTRRKIEEVFQSNRWAI--SGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTW   92 (418)
T ss_dssp             CHHHHHHHHHHHHHTCCST--TSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred             CHHHHHHHHHHHhcCCccc--cCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCcc
Confidence            5899999999998743321  22235667778999999999999998999999999999999999 89999999999999


Q ss_pred             HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      .++...+...|.+++.++.+      |++++++.+++           ++++|+++   +++|...++++|.++|++||+
T Consensus        93 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~---~~~G~~~~~~~i~~~~~~~~~  158 (418)
T 2c81_A           93 IATATAVLNVNALPVFVDVEADTYCIDPQLIKSAITD-----------KTKAIIPV---HLFGSMANMDEINEIAQEHNL  158 (418)
T ss_dssp             THHHHHHHHTTCEEEEECBCTTTCSBCHHHHGGGCCT-----------TEEEECCB---CCTTCCCCHHHHHHHHHHTTC
T ss_pred             HhHHHHHHHcCCEEEEEecCCCCCCcCHHHHHHhhCC-----------CCeEEEEe---CCcCCcccHHHHHHHHHHCCC
Confidence            99999999999998887754      67777766642           34666654   478999999999999999999


Q ss_pred             EEEEEcCccccc-ccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEec-HHHHHHHHhhC-Cc---------
Q psy15447        249 RIFVDESVSFGT-LGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVGS-SYIIEHHRLSG-SG---------  313 (457)
Q Consensus       249 ~li~DEa~~~g~-~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~~-~~~~~~~~~~~-~~---------  313 (457)
                      ++|+||+|+.|. +.  +..    .+.-   .|+++.||  +|++|+ .||+++++ +++++.++... .+         
T Consensus       159 ~li~D~a~~~~~~~~--~~~----~~~~---~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  229 (418)
T 2c81_A          159 FVIEDCAQSHGSVWN--NQR----AGTI---GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSE  229 (418)
T ss_dssp             EEEEECTTCTTCEET--TEE----TTSS---SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGG
T ss_pred             EEEEECcccccCccC--CEe----cccc---cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccc
Confidence            999999998775 32  111    1111   15777788  999975 66888884 77777664321 11         


Q ss_pred             ----ce----------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC------
Q psy15447        314 ----YC----------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT------  373 (457)
Q Consensus       314 ----~~----------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~------  373 (457)
                          +.          +...++++.++.....++.+   ++..++.+++.+++.+.|++   ++++.+..++.+      
T Consensus       230 ~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~---~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~  303 (418)
T 2c81_A          230 LMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQEL---DDKNAIREKNAMFLNDALSK---IDGIKVMKRPPQVSRQTY  303 (418)
T ss_dssp             CCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHTT---STTEEECCCCTTEEECCC
T ss_pred             cccchhhccccccccCcCCCcCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcc---CCCcccCCCCCCCccccc
Confidence                11          11114555555444444333   34677888889999999988   568877533322      


Q ss_pred             CeEEEEecC----CcchHHHHHHHHHHHHHHHHc-Cee---EeccccCccccC-----------------------CC--
Q psy15447        374 PLKYLYLQK----SDDEVASKKLLQTICDMCIQA-GFA---ITCPSHLDQEAK-----------------------KQ--  420 (457)
Q Consensus       374 ~~~~i~~~~----~~~~~~~~~~~~~~~~~l~~~-Gi~---v~~~~~~~~~~~-----------------------~~--  420 (457)
                      .++.+.+++    ..       ...++.+.|.++ ||.   ++++..|....+                       ..  
T Consensus       304 ~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (418)
T 2c81_A          304 YGYVFRFDPVKFGGL-------NADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP  376 (418)
T ss_dssp             SEEEEEECGGGTTTC-------CHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred             EEEEEEEcccccccc-------CHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence            245566653    22       345799999999 999   877653321000                       00  


Q ss_pred             ------CCeEEEEecCCC-CHHHHHHHHHHHHHHHHHh
Q psy15447        421 ------KPSIRITCNISH-TEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       421 ------~~~lRi~~~~~~-t~edi~~~~~~l~~~~~~~  451 (457)
                            .+.+|++++..+ |++|+++++++|+++++++
T Consensus       377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~  414 (418)
T 2c81_A          377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKF  414 (418)
T ss_dssp             HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence                  258999999999 9999999999999988754

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.96  E-value=5.5e-27  Score=226.76  Aligned_cols=303  Identities=12%  Similarity=0.100  Sum_probs=223.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---C--CcEEEecccHHHHH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---L--EETALYSFGFSTSA  154 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~--~~~i~~~sG~~a~~  154 (457)
                      ++++||.++.+ .+..+|++.+++.+++.+.+..  +    |+.. ...++++.++++++   .  +.++++++|++++.
T Consensus        19 ~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~~~--~----y~~~-~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNEN-PFPFPEDLVDEVFRRLNSDALR--I----YYDS-PDEELIEKILSYLDTDFLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCC-SSCCCHHHHHHHHHTCCGGGGG--S----CCCS-SCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCC-CCCCCHHHHHHHHHHhhhhhhh--c----CCCC-chHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHH
Confidence            46899988755 4456799999999887432211  1    1111 25789999999988   3  45677778889999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      .++.++   ||.|++. +.|..+...++..|.++..++.+     |++++                +++++|++.+++||
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l----------------~~~~~v~l~~p~np  150 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNV----------------GEGDVVFIPNPNNP  150 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCCTTSCCCCCCC----------------CTTEEEEEESSCTT
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccCCCCCCCHHHc----------------CCCCEEEEeCCCCC
Confidence            999888   8999999 99999888888889998888753     22222                13467776777999


Q ss_pred             CCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHH
Q psy15447        230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEH  306 (457)
Q Consensus       230 ~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~  306 (457)
                      +|.+.|.+++.++++.+| ++|+||+|+.+..+    ......+.  .+.+++++|+||++|.+|   ||+++++++++.
T Consensus       151 tG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~----~~~~~~~~--~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~  223 (335)
T 1uu1_A          151 TGHVFEREEIERILKTGA-FVALDEAYYEFHGE----SYVDFLKK--YENLAVIRTFSKAFSLAAQRVGYVVASEKFIDA  223 (335)
T ss_dssp             TCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC----CCGGGGGT--CSSEEEEEESTTTTTCGGGCCEEEEECHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhCC-EEEEECcchhhcch----hHHHHhhh--CCCEEEEecchhhcCCcccCeEEEEeCHHHHHH
Confidence            999999999999999989 99999999843221    12222222  234788999999998655   999999999988


Q ss_pred             HHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch
Q psy15447        307 HRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE  386 (457)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  386 (457)
                      ++.....  +  +.+++.++++.++++..+..++.+++++++.+++.+.|++    .|+.+. ++.++++++.++. .  
T Consensus       224 l~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~-~~~~~~~~~~~~~-~--  291 (335)
T 1uu1_A          224 YNRVRLP--F--NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYRIT-DSRGNFVFVFMEK-E--  291 (335)
T ss_dssp             HHHHSCT--T--CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH----HTCCBC-CCCSSEEEEECCT-H--
T ss_pred             HHHhcCC--C--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----CCcEEc-CCCCeEEEEECCC-C--
Confidence            8765433  2  4588888888888765332345778888999999999988    255543 4567788877654 2  


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                           ...++.+.|.++||.+.+.          .+++|++++   +++|+++++++|+++
T Consensus       292 -----~~~~~~~~l~~~gi~v~~~----------~~~iRis~~---~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          292 -----EKERLLEHLRTKNVAVRSF----------REGVRITIG---KREENDMILRELEVF  334 (335)
T ss_dssp             -----HHHHHHHHHHHHTEEEEEE----------TTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred             -----CHHHHHHHHHHCCEEEEEC----------CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence                 4567889999999999872          368999985   578899999998753

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.96  E-value=8.3e-27  Score=228.82  Aligned_cols=306  Identities=13%  Similarity=0.120  Sum_probs=222.3

Q ss_pred             hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHH
Q psy15447         99 IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAI  177 (457)
Q Consensus        99 i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~  177 (457)
                      +.+++.+.+....         |+..+...++++.++++++.+.++++++|++|+..++.++ .++||.|++..+.|.++
T Consensus        21 ~~~~~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~   91 (374)
T 3uwc_A           21 YLNDLREFIKTAD---------FTLGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIAS   91 (374)
T ss_dssp             HHHHHHHHHHHTC---------CSSCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHH
T ss_pred             HHHHHHHHHHcCC---------cccChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHH
Confidence            7777777776521         2346778999999999999999999999999999999999 99999999999999999


Q ss_pred             HHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEE
Q psy15447        178 QTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV  252 (457)
Q Consensus       178 ~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~  252 (457)
                      ...+...|.++..++.+     |++++++.+++           ++++|+   ++|++|.+.|+++|+++|++||+++|+
T Consensus        92 ~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~  157 (374)
T 3uwc_A           92 VGAIVQAGATPVLVDSENGYVIDPEKIEAAITD-----------KTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVE  157 (374)
T ss_dssp             HHHHHHTTCEEEEECBCTTSSBCGGGTGGGCCT-----------TEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHHcCCEEEEEecCCCCCcCHHHHHHhCCC-----------CceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence            99999999999988875     77887776642           345665   667899999999999999999999999


Q ss_pred             EcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEec-HHHHHHHHhhCCc----------ceec
Q psy15447        253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGS-SYIIEHHRLSGSG----------YCFS  317 (457)
Q Consensus       253 DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~-~~~~~~~~~~~~~----------~~~~  317 (457)
                      ||+|+.|..-. +    ...+.   ..|+++.|++  |++|+  .||+++++ +++.+.++.....          ..+.
T Consensus       158 D~~~~~g~~~~-~----~~~~~---~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (374)
T 3uwc_A          158 DACQTILGRIN-D----KFVGS---WGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGIN  229 (374)
T ss_dssp             ECTTCTTCEET-T----EETTS---SSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCB
T ss_pred             eCCCccCceeC-C----eeccc---cccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCcccccccc
Confidence            99998764310 1    12221   1389999977  99975  36777765 4666665432210          1122


Q ss_pred             CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCC-eEEeccCCC-----CeEEEEecCCcchHHHHH
Q psy15447        318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQR-FLVQGHRDT-----PLKYLYLQKSDDEVASKK  391 (457)
Q Consensus       318 ~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~-~~~~~~~~~-----~~~~i~~~~~~~~~~~~~  391 (457)
                      ..++++.++++...++.+   ++..++.+++.+++.+.|++   ..+ +.+......     ..+.+...          
T Consensus       230 ~~~~~~~aa~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----------  293 (374)
T 3uwc_A          230 CRMDTIQAVIANRLMNQL---ETITEKRRGIAHLYDQSFVD---LSEFIDVPVRREGVYHVFHIYVLRVK----------  293 (374)
T ss_dssp             CBCCHHHHHHHHHHGGGH---HHHHHHHHHHHHHHHHHTGG---GTTTEECCCCCTTEECCCSSEEEEET----------
T ss_pred             CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcc---CCCeEEeccCCCCCceeeEEEEEEcC----------
Confidence            235777766665554433   34678888999999999988   445 665422211     22333322          


Q ss_pred             HHHHHHHHHHHcCeeEeccc-cCccccCC-----------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        392 LLQTICDMCIQAGFAITCPS-HLDQEAKK-----------------QKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~-----------------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ...++.+.|.++||.+++.. .|....+.                 ..+.+|++++..+|++||++++++|++++++.
T Consensus       294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~  371 (374)
T 3uwc_A          294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEK  371 (374)
T ss_dssp             THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence            23578899999999988764 11110000                 02689999999999999999999999988753

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.96  E-value=2.4e-26  Score=231.75  Aligned_cols=343  Identities=10%  Similarity=0.034  Sum_probs=226.2

Q ss_pred             CCeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHH
Q psy15447         78 NGIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASA  156 (457)
Q Consensus        78 ~G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~a  156 (457)
                      .|+.|+||.++.. ...  .+++.+++.    . +.      ..|+..+...+|+++++++++.+.++++++|++|+..+
T Consensus        40 ~~~~ylD~~~~~~~~~~--~~~~~~a~~----~-~~------~~y~~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~a  106 (456)
T 2ez2_A           40 SKDIYIDLLTDSGTNAM--SDKQWAGMM----M-GD------EAYAGSENFYHLERTVQELFGFKHIVPTHQGRGAENLL  106 (456)
T ss_dssp             GGGCSEECSCSSSCCCC--CHHHHHHHT----T-CC------CCSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHH
T ss_pred             cccceeeeccccCCccC--CHHHHHHhh----c-ch------hhcccChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHH
Confidence            5778999977532 222  344444433    2 11      12334667889999999999999999999999999999


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---------------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---------------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---------------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      +++++++|| |+.+..+|.++...+...|.++..++.               .|+++|++.+++...       ..+++|
T Consensus       107 l~~l~~~gd-i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~-------~~~~~v  178 (456)
T 2ez2_A          107 SQLAIKPGQ-YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA-------ENIAYI  178 (456)
T ss_dssp             HHHHCCTTC-EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-------GGEEEE
T ss_pred             HHHhCCCCC-EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccc-------cceeEE
Confidence            999999999 544444448888888999988877642               278999999875321       235788


Q ss_pred             EEecCCC-CCCCCCC---hHHHHHHHHHcCcEEEEEcCccccc--------ccCCCCcccc---ccCCCCCCccEEEecC
Q psy15447        222 IVEGVYM-NSADICP---LKDILSLRSKYQARIFVDESVSFGT--------LGSTGHGVTE---YFGVSTEEVDMIIGSL  286 (457)
Q Consensus       222 i~e~v~~-~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~--------~g~~g~~~~~---~~~~~~~~~Di~~~s~  286 (457)
                      ++++++| ++|.+.+   +++|+++|++||++||+||+|++|.        .+..|..+..   ..+..   .|+++.|+
T Consensus       179 ~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~---~d~~~~S~  255 (456)
T 2ez2_A          179 CLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSY---ADGCTMSG  255 (456)
T ss_dssp             EEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT---CSEEEEET
T ss_pred             EEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhccc---CCEEEEeC
Confidence            8887777 8999887   9999999999999999999998751        2222322110   11221   26777688


Q ss_pred             cccccCc-ccEEEe-cHHHHHHHHhhC---CcceecCCCcHHHHHH-HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhccc
Q psy15447        287 EHALGSV-GGFCVG-SSYIIEHHRLSG---SGYCFSASLPPFLAVA-ANKALHLLKANPSLLTKLREKCNTMHSLLSQHK  360 (457)
Q Consensus       287 sK~lg~~-gG~v~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~aa-a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~  360 (457)
                      +|..+.+ ||++++ ++++++.+....   .++....+.++..+++ +.+.++.++  ++..++.+++.+++.+.|++  
T Consensus       256 kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~--~~~~~~~~~~~~~l~~~L~~--  331 (456)
T 2ez2_A          256 KKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLKA--  331 (456)
T ss_dssp             TTTTCCSSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHH--
T ss_pred             cccCCCCceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHhc--
Confidence            8876643 799888 678877664321   1111111223333333 444444332  35677778888999999988  


Q ss_pred             ccCCeEEeccCCCCeEEEEec---CCcchHHHHHHHHHHHHHH-HHcCeeEec-cccCcc-------ccCCCCCeEEEEe
Q psy15447        361 VTQRFLVQGHRDTPLKYLYLQ---KSDDEVASKKLLQTICDMC-IQAGFAITC-PSHLDQ-------EAKKQKPSIRITC  428 (457)
Q Consensus       361 ~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~-~~~~~~-------~~~~~~~~lRi~~  428 (457)
                        .|+++..+..+.++++.+.   ...+..  ......++++| .++||.+.+ +.++..       ......+++||++
T Consensus       332 --~g~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~  407 (456)
T 2ez2_A          332 --AGVPIVEPVGGHAVFLDARRFCEHLTQD--EFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTI  407 (456)
T ss_dssp             --TTCCBCSSCCSSEEEEEHHHHTTTSCGG--GCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEEC
T ss_pred             --CCCccccCCCceEEEEEhHHhcCCCChh--hccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEe
Confidence              4666655556777777763   111100  00134557777 577998644 221100       0012247899999


Q ss_pred             cCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447        429 NIS-HTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       429 ~~~-~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.. +|++|+++++++|+++++...
T Consensus       408 ~~~~~t~e~i~~~~~~l~~~l~~~~  432 (456)
T 2ez2_A          408 PRRVYTYAHMDVVADGIIKLYQHKE  432 (456)
T ss_dssp             CTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhh
Confidence            987 899999999999999987654

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.95  E-value=2.6e-26  Score=226.89  Aligned_cols=319  Identities=15%  Similarity=0.129  Sum_probs=234.8

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-  160 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-  160 (457)
                      +|+|+..   .+  .+++.+++.+++++...         +..+...++++.+++++|.+.+++++||++|+..++.++ 
T Consensus        10 ~i~~~~p---~~--~~~~~~a~~~~~~~~~~---------~~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~   75 (393)
T 1mdo_A           10 FLPFSRP---AM--GAEELAAVKTVLDSGWI---------TTGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALG   75 (393)
T ss_dssp             CBCSCCC---CC--CHHHHHHHHHHHHHTCC---------SSSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTT
T ss_pred             ccccCCC---CC--CHHHHHHHHHHHhcCCc---------CCChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcC
Confidence            5566551   22  47888999999876321         134677899999999999999999999999999999999 


Q ss_pred             cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCC
Q psy15447        161 VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADIC  234 (457)
Q Consensus       161 ~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~  234 (457)
                      .++||.|++..+.|.++...++..|.+++.++.      .|++++++.+++           ++++|++++   ++|.+.
T Consensus        76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-----------~~~~v~~~~---~~G~~~  141 (393)
T 1mdo_A           76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-----------QTKAIIPVH---YAGAPA  141 (393)
T ss_dssp             CCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-----------TEEEECCBC---GGGCCC
T ss_pred             CCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-----------CceEEEEeC---CCCCcC
Confidence            899999999999999999999999999888763      378888887743           346776654   678899


Q ss_pred             ChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhh
Q psy15447        235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLS  310 (457)
Q Consensus       235 ~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~  310 (457)
                      ++++|.++|++||+++|+||+|+.|... .+.    .++.    .|+++.|++  |+++ +.||+++++ +++++.++..
T Consensus       142 ~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~----~~~~----~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~  212 (393)
T 1mdo_A          142 DLDAIYALGERYGIPVIEDAAHATGTSY-KGR----HIGA----RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSL  212 (393)
T ss_dssp             CHHHHHHHHHHHTCCBCEECTTCTTCEE-TTE----ETTS----SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCeEEEECccccCCeE-CCe----ecCC----CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHH
Confidence            9999999999999999999999876432 122    1221    489999999  9885 467888886 7888777543


Q ss_pred             CC-c--------------ceec-------CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        311 GS-G--------------YCFS-------ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       311 ~~-~--------------~~~~-------~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      .. +              +.+.       ..++++.++++.+.++.++   +..++.+++.+++.+.|++    .++.+.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~---~~~~~~~~~~~~l~~~L~~----~~~~~~  285 (393)
T 1mdo_A          213 KFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD---ALNARRAAIAAQYHQAMAD----LPFQPL  285 (393)
T ss_dssp             TBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHT----SSCEEC
T ss_pred             HhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhc----CCcccc
Confidence            21 1              1110       2357887777777665543   3667777899999999988    335553


Q ss_pred             cc------CCCCeEEEEecC---CcchHHHHHHHHHHHHHHHHcCeeEeccccCccc------------cCC----CCCe
Q psy15447        369 GH------RDTPLKYLYLQK---SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE------------AKK----QKPS  423 (457)
Q Consensus       369 ~~------~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~------------~~~----~~~~  423 (457)
                      ..      ..+.++++.++.   ..       ...++.+.|.++||.++++..|...            .+.    ....
T Consensus       286 ~~~~~~~~~~~~~~~v~~~~~~~~~-------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (393)
T 1mdo_A          286 SLPSWEHIHAWHLFIIRVDEARCGI-------TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI  358 (393)
T ss_dssp             CCCSSCEECCCSCEEEECCHHHHSS-------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred             cCCCCCCCceeEEEEEEeccccccc-------CHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence            21      345578887763   12       3457899999999999876544110            000    1347


Q ss_pred             EEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        424 IRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       424 lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +|++++..+|++|+++++++|+++++..
T Consensus       359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          359 CSLPLFPDMTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred             EEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999887544

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.95  E-value=3.9e-26  Score=222.71  Aligned_cols=309  Identities=15%  Similarity=0.113  Sum_probs=225.1

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC---cEEEecccHHHHHHHHHhhcCCCCEEEEeCc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE---ETALYSFGFSTSASAIAAYVKRNDAVFVDEN  172 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~  172 (457)
                      +|++.+++.+.+.+...+.+ .+ .....+...++++++++++|.+   .+++++||++|+..++.++.++ +.++...+
T Consensus        16 ~~~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~   92 (362)
T 3ffr_A           16 YPTVRQHMITALDEKIGVIS-HR-SKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNG   92 (362)
T ss_dssp             CTTHHHHHHHHHHTTTTTSC-TT-SHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECS
T ss_pred             CHHHHHHHHHHhcCCccCcC-CC-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCc
Confidence            58899998888875221111 11 1123467788999999999863   4677788999999999999988 76777766


Q ss_pred             ccHHH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447        173 INFAI-QTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY  246 (457)
Q Consensus       173 ~h~~~-~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~  246 (457)
                      .|... ...+...|.++..++.+     |+++++  +   .        +++++|++++++|++|.+.|+++|.++|++|
T Consensus        93 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~---~--------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~  159 (362)
T 3ffr_A           93 SFSKRFYEFAGELGREAYKEEAAFGKGFYPADIT--V---P--------ADAEIICLTHNETSSGVSMPVEDINTFRDKN  159 (362)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC--C---C--------TTCCEEEEESEETTTTEECCHHHHTTSGGGS
T ss_pred             HHHHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh--c---c--------CCccEEEEEcCCCCcceeCCHHHHHHHHHhC
Confidence            66532 33556678888777643     667776  1   1        4567888889999999999999999999999


Q ss_pred             -CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhCC-----c-----
Q psy15447        247 -QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSGS-----G-----  313 (457)
Q Consensus       247 -g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~-----~-----  313 (457)
                       |+++|+|++|++|...         .++  ..+|+++.|++|+++ +.| |+++.++++++.++....     +     
T Consensus       160 p~~~li~D~a~~~~~~~---------~~~--~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~  228 (362)
T 3ffr_A          160 KDALIFVDAVSSLPYPK---------FDW--TKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTI  228 (362)
T ss_dssp             TTSEEEEECTTTTTSSC---------CCT--TSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSH
T ss_pred             CCCEEEEecccccCCcc---------cCh--hHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccH
Confidence             9999999999865321         112  226899999999998 555 788889888777654221     0     


Q ss_pred             ---------ceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc----CCCCeEEE
Q psy15447        314 ---------YCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH----RDTPLKYL  378 (457)
Q Consensus       314 ---------~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~----~~~~~~~i  378 (457)
                               .....+.+....+++.++++.+.+.  ++++++.+++.+++.+.|++   .+|+.+..+    ..+.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~  305 (362)
T 3ffr_A          229 PSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIES---SKVFSFGVEDAKLRSMTTIVA  305 (362)
T ss_dssp             HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH---CSSEEESSSCGGGBCSSEEEE
T ss_pred             HHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH---ccCceeccCChhhcCCceEEE
Confidence                     0112345666666666777765432  46788899999999999988   568887541    23567777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++. .        ..++.+.|.++||.++++..+     ...+++|++++..+|++|+++++++|++++
T Consensus       306 ~~~~-~--------~~~~~~~l~~~gi~~~~g~~~-----~~~~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          306 NTTM-L--------PGEINKILEPFDMAVGAGYGS-----KKETQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             EESS-C--------HHHHHHHHGGGTEEEEECSGG-----GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             ecCC-C--------HHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            7665 2        347899999999999876432     235799999999999999999999998764

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.95  E-value=5.8e-27  Score=230.01  Aligned_cols=306  Identities=15%  Similarity=0.123  Sum_probs=220.7

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      |++.+++.+++....         ++..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.+.|.
T Consensus        17 ~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~   87 (373)
T 3frk_A           17 YEIKFKFEEIYKRNW---------FILGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFI   87 (373)
T ss_dssp             HHHHHHHHHHHHHTC---------CSSSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCT
T ss_pred             HHHHHHHHHHHHCCC---------ccCCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence            566777777766521         2346778999999999999999999999999999999999 899999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...++..|.++..++.+      |++++++.+++           ++++|+   ++|++|.+.|+++|.++|++||++
T Consensus        88 ~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-----------~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~  153 (373)
T 3frk_A           88 ATALAVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-----------KTKAII---AVHLYGQPADMDEIKRIAKKYNLK  153 (373)
T ss_dssp             HHHHHHHHHSCEEEEECEETTTTEECGGGTGGGCCT-----------TEEEEE---EECCTTCCCCHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHcCCEEEEEeccccccCcCHHHHHHhcCC-----------CCeEEE---EECCCcCcccHHHHHHHHHHcCCE
Confidence            9999999999999888765      78888776642           445666   456889999999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC--cccEEEec-HHHHHHHHhh---CCc-------c
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS--VGGFCVGS-SYIIEHHRLS---GSG-------Y  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~--~gG~v~~~-~~~~~~~~~~---~~~-------~  314 (457)
                      +|+||+|++|.. ..+.    ..+.   ..|+++.||+  |++|+  .||+++++ +++.+.++..   +..       .
T Consensus       154 li~D~a~~~g~~-~~~~----~~~~---~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  225 (373)
T 3frk_A          154 LIEDAAQAHGSL-YKGM----KVGS---LGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYK  225 (373)
T ss_dssp             EEEECTTCTTCE-ETTE----ETTS---SSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSC
T ss_pred             EEEECCcccCCE-ECCE----eccc---cccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccc
Confidence            999999987654 1111    2222   1378888977  99975  46888776 4566555432   110       1


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEEEecCCcchHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~  389 (457)
                      .+...++++.++.++..++.++   +..++.+++.+++.+.|++    .++.+.....     ...+.+...        
T Consensus       226 g~~~~~~~~~aa~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~--------  290 (373)
T 3frk_A          226 GFNSRLDELQAGFLRVKLKYLD---KWNEERRKIAQKYIAGINN----PNVIIPVEADYAKHVWYTFVIRSE--------  290 (373)
T ss_dssp             CCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHCCC----TTEECCCCCTTEECCCSSEEEEES--------
T ss_pred             cccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----CceEeccCCCCCceeeEEEEEEeC--------
Confidence            1233468888777766665443   4678888999999999988    3355432211     123333332        


Q ss_pred             HHHHHHHHHHHHHcCeeEeccc-cCccccC--------C---------CCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPS-HLDQEAK--------K---------QKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~--------~---------~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                        ...++.+.|.++||.+++.. .|....+        .         ....+|++++..+|++||++++++|+++..+
T Consensus       291 --~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~  367 (373)
T 3frk_A          291 --KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE  367 (373)
T ss_dssp             --SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred             --CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence              23578899999999998654 1211000        0         0157999999999999999999999887554

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.95  E-value=1.9e-26  Score=228.96  Aligned_cols=291  Identities=12%  Similarity=0.102  Sum_probs=213.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|+++++++.|.+.+++++||++|+..++.+++++||.|++..+.|+.+...+..    .|.++..++.+|+++
T Consensus        79 ~~p~~~~l~~~la~~~g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~  158 (414)
T 3ndn_A           79 GNPTVSVFEERLRLIEGAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQ  158 (414)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHH
T ss_pred             CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHH
Confidence            5678999999999999999999999999999999999999999999999999887766644    899999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.++++|+++|++||++||+||+|+.|....   .  ..+     +
T Consensus       159 l~~ai~~-----------~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~---~--~~~-----g  217 (414)
T 3ndn_A          159 WERALSV-----------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ---G--FPL-----G  217 (414)
T ss_dssp             HHHHTSS-----------CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---C--GGG-----T
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC---c--hhc-----C
Confidence            9988853           45789999999999999999999999999999999999998554321   1  112     3


Q ss_pred             ccEEEecCcccccCc----ccEEEecHHHHH-HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSSYIIE-HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|++|+.    +|+++++++.+. .++...  ..++.++++..+++++..++.+.   .++++..++++++.
T Consensus       218 ~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~--~~~g~~~~~~~a~~~~~~l~~l~---~r~~~~~~~a~~l~  292 (414)
T 3ndn_A          218 VDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLM--RHTGPAMSAFNAWVLLKGLETLA---IRVQHSNASAQRIA  292 (414)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHH--HHHCCCCCHHHHHHHHHHGGGHH---HHHHHHHHHHHHHH
T ss_pred             CCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHH--HHcCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence            489999999999753    589999887665 444221  12344568888777776665443   36678888999999


Q ss_pred             HHhhcccccCCeEEec-c----------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-
Q psy15447        354 SLLSQHKVTQRFLVQG-H----------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-  415 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~-~----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-  415 (457)
                      +.|++   .+++..+. +                ..+.++++.++....  .....+.++.+.|...++.+..+...+. 
T Consensus       293 ~~L~~---~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~--~~~~~~~~~~~~l~~~~~~~s~G~~~sl~  367 (414)
T 3ndn_A          293 EFLNG---HPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED--VAKQRAFEVLDKMRLIDISNNLGDAKSLV  367 (414)
T ss_dssp             HHHHT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG--GHHHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred             HHHhc---CCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc--ccHHHHHHHHHhCccceEcCCCCCCCcee
Confidence            99987   34443221 1                136789999875300  0001466788887766766655432111 


Q ss_pred             -----------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        416 -----------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       416 -----------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                                       .....++.+|+++....    ++.+++.|++++
T Consensus       368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~----~~dli~dl~~al  413 (414)
T 3ndn_A          368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGLED----TDDLIADIDRAL  413 (414)
T ss_dssp             ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSC----HHHHHHHHHHHH
T ss_pred             eCccccccccCCHHHHHhcCCCCCeEEEEeCcCC----HHHHHHHHHHhh
Confidence                             01234679999997644    455555555443

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.95  E-value=2.2e-26  Score=222.11  Aligned_cols=284  Identities=14%  Similarity=0.157  Sum_probs=210.0

Q ss_pred             HHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHHHHHHH
Q psy15447        129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHLEELLR  204 (457)
Q Consensus       129 ~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~le~~l~  204 (457)
                      ++++++++++|.+..+++++|++|+..++.++.++||.|++..+.|.++...+    ...|.++..++..|++++++.++
T Consensus         2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~   81 (331)
T 1pff_A            2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK   81 (331)
T ss_dssp             HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred             hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence            68899999999998999999999999999999999999999999999877665    34789999999889999888774


Q ss_pred             hhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH-cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEE
Q psy15447        205 QQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK-YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII  283 (457)
Q Consensus       205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~-~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~  283 (457)
                                 +++++|++++++|++|.+.|+++|.++|++ ||+++|+||+|+.|.+..   ..  .+     +.|+++
T Consensus        82 -----------~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~---~~--~~-----~~d~~~  140 (331)
T 1pff_A           82 -----------PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN---PL--DL-----GVDIVV  140 (331)
T ss_dssp             -----------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC---GG--GG-----TCSEEE
T ss_pred             -----------CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCC---hh--hc-----CCcEEE
Confidence                       245789999999999999999999999999 999999999998765431   11  12     358999


Q ss_pred             ecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        284 GSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       284 ~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                      .|++|++|++    +|++++++ ++++.++.....+ ++.+.+++.++++.++++.+.   ...++..++.+.+.+.|++
T Consensus       141 ~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~  216 (331)
T 1pff_A          141 HSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDI-TGAIISPHDAWLITRGTLTLD---MRVKRAAENAQKVAEFLHE  216 (331)
T ss_dssp             EETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCC-CCCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred             EECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhh-cCCCCCHHHHHHHHcCcchHH---HHHHHHHHHHHHHHHHHHc
Confidence            9999999753    68999998 8888887544331 334568887777767766543   2445555566655555543


Q ss_pred             cc-----------ccCCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc---------cCcc
Q psy15447        359 HK-----------VTQRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS---------HLDQ  415 (457)
Q Consensus       359 ~~-----------~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------~~~~  415 (457)
                      ..           ..+++.+..   +..++++.+.+.+          ..++.+.|.++||+++...         +|..
T Consensus       217 ~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~  286 (331)
T 1pff_A          217 HKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG----------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPAS  286 (331)
T ss_dssp             CTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS----------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHH
T ss_pred             CCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC----------HHHHHHHHHhCCCceeccCCCCcceeeecchh
Confidence            11           012222221   1246788887752          1356777888899876542         2211


Q ss_pred             ------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        416 ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       416 ------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                                  .....++.+|++++..+|++++++++++|+++
T Consensus       287 ~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          287 MTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             HTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred             hcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence                        00112579999999999999999999998754

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.95  E-value=2.9e-27  Score=237.82  Aligned_cols=336  Identities=13%  Similarity=0.093  Sum_probs=214.0

Q ss_pred             eEEe-ecCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCc----E-EEecccH
Q psy15447         82 CINF-ATHNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEE----T-ALYSFGF  150 (457)
Q Consensus        82 ~id~-~s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~----~-i~~~sG~  150 (457)
                      .|++ +|.++    .+|+|.+|+...+ .+|+.++.+++...|. +...++|    +++++++|.+.    + ++++||+
T Consensus        56 ~i~lias~n~----~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~-~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt  130 (490)
T 2a7v_A           56 GLELIASENF----CSRAALEALGSCLNNKYSEGYPGKRYYGGA-EVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS  130 (490)
T ss_dssp             SEECCTTCCC----CCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred             CceEECCCCC----CCHHHHHHHHHHHcCCCccCCCcccccCcc-HHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchH
Confidence            3444 45555    2799999998887 4576677777665554 3444555    89999999886    4 4556999


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHH--------HHHhcCCe--EEEec------CCCHHHHHHHHHhhchhcccCC
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQT--------GLIASRCK--VQYFK------HNNMQHLEELLRQQDERDTLNS  214 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--------~~~~~g~~--~~~~~------~~d~~~le~~l~~~~~~~~~~~  214 (457)
                      +||..++.+++++||.|++..+.|++...        .+..+|..  +..++      ..|++++++.+++.        
T Consensus       131 ~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~--------  202 (490)
T 2a7v_A          131 PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLF--------  202 (490)
T ss_dssp             HHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHH--------
T ss_pred             HHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhc--------
Confidence            99999999999999999999988765321        23344532  23332      34899999998753        


Q ss_pred             CCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCc
Q psy15447        215 KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV  293 (457)
Q Consensus       215 ~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~  293 (457)
                        ++++|++....+  |...|+++|+++|++||++|++|++|..|.++. |... ..+    ..+|+++.|+||++ |+.
T Consensus       203 --~~klIi~~~s~~--~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~-g~~~-~~~----~~aDiv~~S~hK~l~Gp~  272 (490)
T 2a7v_A          203 --RPRLIIAGTSAY--ARLIDYARMREVCDEVKAHLLADMAHISGLVAA-KVIP-SPF----KHADIVTTTTHKTLRGAR  272 (490)
T ss_dssp             --CCSEEEECCSSC--CSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHT-TSSC-CGG----GTCSEEEEESSGGGCSCS
T ss_pred             --CCcEEEEcCCCC--CCcccHHHHHHHHHHcCCEEEEccccccccccC-CcCC-CCC----CCCCEEEECCcccCcccc
Confidence              234666654443  456799999999999999999999998775432 1111 111    24689999999999 567


Q ss_pred             ccEEEecHH---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHh
Q psy15447        294 GGFCVGSSY---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       294 gG~v~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L  356 (457)
                      ||+++++++               +.+.++....+...+ +.++...++..+++....  +.+++.+++.++++++.+.|
T Consensus       273 GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qg-gp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L  351 (490)
T 2a7v_A          273 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQG-GPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL  351 (490)
T ss_dssp             CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCC-SCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chheeeccchhcccccccchhhHHHHHHHHHHhcccCCC-CchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            899988764               445555432222222 234444444445555442  22567889999999999999


Q ss_pred             hcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec----CC
Q psy15447        357 SQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN----IS  431 (457)
Q Consensus       357 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~----~~  431 (457)
                      ++    .|+.+... ..++++++.+....-      ...++.+.|.++||.+.....|....+.....+||+.+    ..
T Consensus       352 ~~----~G~~v~~~~t~t~lv~vdl~~~g~------~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g  421 (490)
T 2a7v_A          352 LE----RGYSLVSGGTDNHLVLVDLRPKGL------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ  421 (490)
T ss_dssp             HH----TTCEEGGGSCSSSEEEEECTTTTC------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred             HH----cCcEEecCCCCCeEEEEEeCCCCC------CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCC
Confidence            98    68888642 457888888764310      24567788888999998654443222334578999664    45


Q ss_pred             CCHHHHHHHHHHHHHHHHHh
Q psy15447        432 HTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++++|++++++.|.++++..
T Consensus       422 ~~~~d~~~~~~~i~~~l~~~  441 (490)
T 2a7v_A          422 FREDDFRRVVDFIDEGVNIG  441 (490)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhh
Confidence            79999999999999988643

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.95  E-value=3.2e-26  Score=224.59  Aligned_cols=316  Identities=13%  Similarity=0.134  Sum_probs=225.8

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh---cCCCCEEEEeC
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY---VKRNDAVFVDE  171 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~  171 (457)
                      .+|++.+++.+++... ..+        ..+...++++.+++++|.+.+++++||++|+..++.++   .++||.|++..
T Consensus        11 ~~~~v~~a~~~~~~~~-~~~--------~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~   81 (375)
T 2fnu_A           11 LDKEDKKAVLEVLNSK-QLT--------QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTP   81 (375)
T ss_dssp             CCHHHHHHHHHHHTSS-CCS--------SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECS
T ss_pred             CCHHHHHHHHHHHHcC-ccc--------CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECC
Confidence            3689999999998652 111        23567899999999999998899999999999999999   88999999999


Q ss_pred             cccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447        172 NINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY  246 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~  246 (457)
                      +.|.++...+...|.++..++.+     |++++++.+++           ++++|++.++   +|.+.|+++|.++|++|
T Consensus        82 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~~---tG~~~~l~~i~~l~~~~  147 (375)
T 2fnu_A           82 ISFVATANMLLESGYTPVFAGIKNDGNIDELALEKLINE-----------RTKAIVSVDY---AGKSVEVESVQKLCKKH  147 (375)
T ss_dssp             SSCTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGCCT-----------TEEEEEEECG---GGCCCCHHHHHHHHHHH
T ss_pred             CccHhHHHHHHHCCCEEEEeccCCCCCCCHHHHHhhcCc-----------CceEEEEeCC---cCCccCHHHHHHHHHHc
Confidence            99999999999999998887753     66777665532           3456665554   79999999999999999


Q ss_pred             CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--ccccCcccEEEe-c-HHHHHHHHhhCC-c--------
Q psy15447        247 QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGSVGGFCVG-S-SYIIEHHRLSGS-G--------  313 (457)
Q Consensus       247 g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~~gG~v~~-~-~~~~~~~~~~~~-~--------  313 (457)
                      |+++|+||+|++|.... +    ...+..+   |+++.|++  |++|++.|+++. + +++++.++.... +        
T Consensus       148 ~~~li~D~a~~~~~~~~-~----~~~~~~~---~i~~~s~s~~K~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (375)
T 2fnu_A          148 SLSFLSDSSHALGSEYQ-N----KKVGGFA---LASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFE  219 (375)
T ss_dssp             TCEEEEECTTCTTCEET-T----EETTSSS---SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSC
T ss_pred             CCEEEEECccccCCeEC-C----eeccccC---CeEEEeCCCCCCccccCceEEEeCCHHHHHHHHHHHhcCCccccccc
Confidence            99999999998765431 1    1122111   57777888  999763355444 3 677776654321 1        


Q ss_pred             -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCC
Q psy15447        314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKS  383 (457)
Q Consensus       314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~  383 (457)
                           ..+...++++.+++++..++.+   ++..++.+++.+++.+.|++   ++++.+..+.     ...++++.++..
T Consensus       220 ~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (375)
T 2fnu_A          220 GEVKSIGHNFRLNEIQSALGLSQLKKA---PFLMQKREEAALTYDRIFKD---NPYFTPLHPLLKDKSSNHLYPILMHQK  293 (375)
T ss_dssp             EEESSCCCBCCCCHHHHHHHHHHHTTH---HHHHHHHHHHHHHHHHHHTT---CSSEEESGGGCSSCCCCSCEEEEECGG
T ss_pred             cccccccccCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCCCCcceEEEEEEeCcc
Confidence                 1111245777777666554433   34778889999999999998   5678775431     234456666532


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccc--cC--------C------CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQE--AK--------K------QKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~--------~------~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ..     ....++.+.|.++||.++....|...  ..        .      ..+.+|++++..+|++|+++++++|+++
T Consensus       294 ~~-----~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  368 (375)
T 2fnu_A          294 FF-----TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKT  368 (375)
T ss_dssp             GG-----GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             cc-----chHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHH
Confidence            10     02357889999999998843222110  00        0      1257999999999999999999999999


Q ss_pred             HHHhc
Q psy15447        448 HDIAV  452 (457)
Q Consensus       448 ~~~~~  452 (457)
                      ++.+.
T Consensus       369 ~~~~~  373 (375)
T 2fnu_A          369 FESFK  373 (375)
T ss_dssp             HHHHC
T ss_pred             HHHhc
Confidence            87653

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.95  E-value=3.4e-27  Score=236.00  Aligned_cols=308  Identities=10%  Similarity=-0.002  Sum_probs=215.0

Q ss_pred             hHHHHHHHHHHHhhcCCC--cEEEecccHHHH--HHHHHhhcC--C----------CCEEEEeCcccHHHHHHHHhcCCe
Q psy15447        124 NVVHLDLENDIASFMGLE--ETALYSFGFSTS--ASAIAAYVK--R----------NDAVFVDENINFAIQTGLIASRCK  187 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~--~~ai~a~~~--~----------gd~v~~~~~~h~~~~~~~~~~g~~  187 (457)
                      ..-..+|++.++++++.+  .+++++++++++  ..++.+++.  +          ||.|++..++|..+...++..|.+
T Consensus        77 ~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~  156 (427)
T 3ppl_A           77 LDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFE  156 (427)
T ss_dssp             SSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCE
T ss_pred             CCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCE
Confidence            334578888999988754  566666777888  477888766  5          899999999999999999999998


Q ss_pred             EEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEe-cCCCCCCCCCChH---HHHHHH-HHcCcEEEEEcCccc
Q psy15447        188 VQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVE-GVYMNSADICPLK---DILSLR-SKYQARIFVDESVSF  258 (457)
Q Consensus       188 ~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e-~v~~~~G~i~~l~---~i~~l~-~~~g~~li~DEa~~~  258 (457)
                      ++.++.+    |++++++.++.          +++++|++. +++||+|.+.|.+   +|+++| ++||+++|+||+|+.
T Consensus       157 ~~~v~~~~~g~d~~~l~~~l~~----------~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~  226 (427)
T 3ppl_A          157 MISVPMNEDGPDMDAVEELVKN----------PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAV  226 (427)
T ss_dssp             EEEEEEETTEECHHHHHHHTTS----------TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTT
T ss_pred             EEEeCCCCCCCCHHHHHHHHhc----------CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcc
Confidence            8877643    78899888842          345666655 7889999999966   888888 999999999999987


Q ss_pred             ccccCCCCccccccCC----CCCCccEEEecCccccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        259 GTLGSTGHGVTEYFGV----STEEVDMIIGSLEHALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       259 g~~g~~g~~~~~~~~~----~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      ..++..+......+++    ...+.+++++||||+++  .+.||+++++++++.+........+  +.+++.++++.+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~~l  304 (427)
T 3ppl_A          227 HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRGI--GPNKVNQLAHARYF  304 (427)
T ss_dssp             CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHCS--CCCHHHHHHHHHHH
T ss_pred             cccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhcccC--CCCHHHHHHHHHHH
Confidence            6665433222122211    11345799999999852  3449999999998888654322222  34666666655554


Q ss_pred             HH---H-hhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447        333 HL---L-KANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI  407 (457)
Q Consensus       333 ~~---~-~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v  407 (457)
                      +.   + +...+.++.++++.+.+.+.|.+. ....++.+..+..+.++++.++..        ...++.+.|.++||.+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gv~v  376 (427)
T 3ppl_A          305 GDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG--------TASRVAELAKEAGIAL  376 (427)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT--------CHHHHHHHHHHTTEEC
T ss_pred             hChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc--------hHHHHHHHHHHCCCEE
Confidence            32   1 112335566666777776666441 112356665566788888888754        2346788899999999


Q ss_pred             eccc-cCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        408 TCPS-HLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       408 ~~~~-~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++++ ++........+++||+++.. +++++++++++|+++++++.
T Consensus       377 ~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~~  421 (427)
T 3ppl_A          377 TGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLAA  421 (427)
T ss_dssp             CCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHHH
Confidence            8833 22111112468999999654 99999999999999987663

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.95  E-value=3e-27  Score=235.12  Aligned_cols=331  Identities=11%  Similarity=0.027  Sum_probs=224.2

Q ss_pred             CCeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C-------CCcEEE
Q psy15447         78 NGIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G-------LEETAL  145 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g-------~~~~i~  145 (457)
                      +|+.++||+.+.|++..    ..|.+.+++.+++++.+.. .    .|+......++++.+++++ +       .+.+++
T Consensus        28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~----~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~  102 (412)
T 1ajs_A           28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLN-H----EYLPILGLAEFRTCASRLALGDDSPALQEKRVGG  102 (412)
T ss_dssp             CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCC-C----CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred             CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhc-c----CCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEE
Confidence            36789999998875542    3478889888877331111 0    1122223466777777766 3       256788


Q ss_pred             --ecccHHHHHHHHH--hhcCCC-----CEEEEeCcccHHHHHHHHhcCCe-EEEecC---C----CHHHHHHHHHhhch
Q psy15447        146 --YSFGFSTSASAIA--AYVKRN-----DAVFVDENINFAIQTGLIASRCK-VQYFKH---N----NMQHLEELLRQQDE  208 (457)
Q Consensus       146 --~~sG~~a~~~ai~--a~~~~g-----d~v~~~~~~h~~~~~~~~~~g~~-~~~~~~---~----d~~~le~~l~~~~~  208 (457)
                        +++|++|+..+++  .++++|     |.|++..++|..+...+...|.+ +..++.   +    |++++++.+++.. 
T Consensus       103 ~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-  181 (412)
T 1ajs_A          103 VQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAP-  181 (412)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSC-
T ss_pred             EECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCC-
Confidence              8899999998864  446788     99999999998888888888988 887775   3    7899999887532 


Q ss_pred             hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC---Cc-cccccCCCCCCccE
Q psy15447        209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG---HG-VTEYFGVSTEEVDM  281 (457)
Q Consensus       209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g---~~-~~~~~~~~~~~~Di  281 (457)
                             .+++++++++++||+|.+.+   +++|+++|++||+++|+||+|+...++  |   .. ....+...++ .++
T Consensus       182 -------~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~-~~i  251 (412)
T 1ajs_A          182 -------EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASG--NLEKDAWAIRYFVSEGF-ELF  251 (412)
T ss_dssp             -------TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS--CHHHHTHHHHHHHHTTC-CEE
T ss_pred             -------CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCC--cccccchHHHHHhccCC-cEE
Confidence                   34577888999999999987   568999999999999999998643222  2   11 1111111122 248


Q ss_pred             EEecCcccccCcc---cEEEe---cHHH----HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-------hCcHHHHH
Q psy15447        282 IIGSLEHALGSVG---GFCVG---SSYI----IEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-------ANPSLLTK  344 (457)
Q Consensus       282 ~~~s~sK~lg~~g---G~v~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-------~~~~~~~~  344 (457)
                      ++.|+||++|+.|   ||+++   ++++    ++.+... ....++ +.+++.++++.++|+...       ..++++++
T Consensus       252 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  329 (412)
T 1ajs_A          252 CAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKI-VRVTWS-NPPAQGARIVARTLSDPELFHEWTGNVKTMADR  329 (412)
T ss_dssp             EEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHH-HHTTTS-SCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHH-HhcccC-CCChHHHHHHHHHHcCcchhHHHHHHHHHHHHH
Confidence            8999999998766   89888   7764    3333321 111222 236777777777776432       22457788


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI  424 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l  424 (457)
                      ++++.+++.+.|+++..-.++.+..+..+.+.++.+.           ...+...+.++||++.+             .+
T Consensus       330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~-------------~~  385 (412)
T 1ajs_A          330 ILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN-----------PKQVEYLINQKHIYLLP-------------SG  385 (412)
T ss_dssp             HHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCT-------------TS
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC-----------HHHHHHHHHhCCEEecC-------------Cc
Confidence            8999999999998821000355543444555554322           12344455578998863             26


Q ss_pred             EEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        425 RITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       425 Ri~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |++++. +|++++++++++|+++++++
T Consensus       386 Ris~~~-~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          386 RINMCG-LTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             EEEGGG-CCTTTHHHHHHHHHHHHHHC
T ss_pred             EEEeee-CCHHHHHHHHHHHHHHHHhc
Confidence            999874 59999999999999998764

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.95  E-value=1.2e-26  Score=236.73  Aligned_cols=338  Identities=8%  Similarity=0.052  Sum_probs=239.1

Q ss_pred             ecCCccCC--CCChhhHHHHHHHHHhcCCC-CCCCCCcccChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHH
Q psy15447         86 ATHNYLSF--VENPDIEKCAIDCIDKNGVG-SCGPRGFYGTNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIA  158 (457)
Q Consensus        86 ~s~~~l~~--~~~p~i~~a~~~~l~~~~~~-~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~  158 (457)
                      .++.+++.  .+++.+.+++.+++.++... ...+....+..+...++++.+++++|.+    .++++++|++|+..++.
T Consensus        65 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~  144 (497)
T 3mc6_A           65 KEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACL  144 (497)
T ss_dssp             GGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHH
T ss_pred             CCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHH
Confidence            33444454  34578999999999885432 2223333455677778888999999876    56888899999999998


Q ss_pred             hhcC-----CC---CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        159 AYVK-----RN---DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       159 a~~~-----~g---d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      ++++     +|   |.|+++.+.|.++..++...|.+++.++.+      |+++|++.++           +++++|+++
T Consensus       145 a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~  213 (497)
T 3mc6_A          145 SAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFIN-----------KNTVLLVGS  213 (497)
T ss_dssp             HHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCC-----------SSEEEEEEE
T ss_pred             HHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHh-----------hCCEEEEEE
Confidence            8754     45   899999999999999999999998887753      4677777664           346899999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc---CCCCccccccCCCCCCccEEEecCcccc-cCc-ccEEEe
Q psy15447        225 GVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG---STGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV-GGFCVG  299 (457)
Q Consensus       225 ~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g---~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~-gG~v~~  299 (457)
                      +++|++|.+.|+++|+++|++||++||+||+|+.+...   ..|.+....+.....++|+++.|++|++ ++. .|+++.
T Consensus       214 ~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~  293 (497)
T 3mc6_A          214 APNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMY  293 (497)
T ss_dssp             TTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEEC
T ss_pred             CCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEe
Confidence            99999999999999999999999999999999744321   1122211112222346799999999997 433 377777


Q ss_pred             cHHHHHHHHhhC-Cc--------ceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEe
Q psy15447        300 SSYIIEHHRLSG-SG--------YCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ  368 (457)
Q Consensus       300 ~~~~~~~~~~~~-~~--------~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~  368 (457)
                      +++.+....... ..        ..+.++.+....++..++++.+...  .++.++..++++++.+.|++.  ++|+++.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~g~~~~  371 (497)
T 3mc6_A          294 RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQEN--IPDLDIM  371 (497)
T ss_dssp             SSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEC
T ss_pred             cCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEe
Confidence            765544331100 00        1111222333334444455544332  456788889999999999881  1588887


Q ss_pred             ccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        369 GHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       369 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .++...++.+.....        ...++.+.|.++||.+.....        ++.+|++++ .+|++|+++++++|++++
T Consensus       372 ~~~~~~~v~~~~~~~--------~~~~l~~~L~~~Gi~v~~~~~--------~~~~ri~~~-~~t~e~i~~~~~~L~~~l  434 (497)
T 3mc6_A          372 GNPRYSVISFSSKTL--------NIHELSDRLSKKGWHFNALQK--------PVALHMAFT-RLSAHVVDEICDILRTTV  434 (497)
T ss_dssp             SCCCSSEEEEECTTT--------THHHHHHHHHTTTCBCEECCS--------SCCEEEECC-TTTTCTHHHHHHHHHHHH
T ss_pred             cCCCeeEEEEeCCCC--------CHHHHHHHHHhCCEEEecCCC--------CCeEEEEEe-CCCHHHHHHHHHHHHHHH
Confidence            666677777765432        456899999999998876543        257899998 789999999999999999


Q ss_pred             HHhcC
Q psy15447        449 DIAVQ  453 (457)
Q Consensus       449 ~~~~~  453 (457)
                      +++..
T Consensus       435 ~~~~~  439 (497)
T 3mc6_A          435 QELKS  439 (497)
T ss_dssp             HHHTC
T ss_pred             HHHHh
Confidence            88754

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.95  E-value=3e-27  Score=233.86  Aligned_cols=327  Identities=11%  Similarity=0.050  Sum_probs=219.0

Q ss_pred             CCeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc---C-----CCcEEE
Q psy15447         78 NGIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM---G-----LEETAL  145 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g-----~~~~i~  145 (457)
                      .|++++||+++.|++..    .+|.+.+++.+++++....  +    |+......++++.+++++   +     .+.+++
T Consensus        24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~----y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~   97 (396)
T 2q7w_A           24 ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTK--N----YLGIDGIPEFGRCTQELLFGKGSALINDKRART   97 (396)
T ss_dssp             ----CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCC--C----CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred             CCCCceecccccccCCCCCccCcHHHHHHHHhhcCccccc--C----CCCCCCCHHHHHHHHHHHhcCCCCccccccEEE
Confidence            46789999998875542    3689999999888763111  1    122223456677777765   2     345666


Q ss_pred             --ecccHHHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC---C----CHHHHHHHHHhhchhcccCC
Q psy15447        146 --YSFGFSTSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKVQYFKH---N----NMQHLEELLRQQDERDTLNS  214 (457)
Q Consensus       146 --~~sG~~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~---~----d~~~le~~l~~~~~~~~~~~  214 (457)
                        +++|++|+..+++++  ..+||.|++..++|..+...++..|.++..++.   +    |++++++.+++..       
T Consensus        98 ~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-------  170 (396)
T 2q7w_A           98 AQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ-------  170 (396)
T ss_dssp             EEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC-------
T ss_pred             EecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCC-------
Confidence              888899999998766  369999999999999988889999999888876   3    7899999886521       


Q ss_pred             CCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC--CCCccccccCCCCCCccEEEecCccc
Q psy15447        215 KVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS--TGHGVTEYFGVSTEEVDMIIGSLEHA  289 (457)
Q Consensus       215 ~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~--~g~~~~~~~~~~~~~~Di~~~s~sK~  289 (457)
                       .+++++++++++||+|.+.+   +++|+++|++||+++|+||+|+...++.  .+..+ ..+...+ +.+++++|+||+
T Consensus       171 -~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~~-~~~i~~~s~sK~  247 (396)
T 2q7w_A          171 -AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGL-RAFAAMH-KELIVASSYSXN  247 (396)
T ss_dssp             -TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHH-HHHHHHC-SCEEEEEECTTT
T ss_pred             -CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHH-HHHHhcC-CcEEEEEecccc
Confidence             24678888999999999987   5689999999999999999997644431  11111 1111111 235889999999


Q ss_pred             ccCcc---cEEEe---cH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hhCcHHHHHHHHHHHHH
Q psy15447        290 LGSVG---GFCVG---SS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KANPSLLTKLREKCNTM  352 (457)
Q Consensus       290 lg~~g---G~v~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~~~~~~~~l~~~~~~l  352 (457)
                      +|..|   ||+++   ++    .+++.+.... ...++ +.+++.++++.++++..       +..++.+++++++.+++
T Consensus       248 ~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  325 (396)
T 2q7w_A          248 FGLYNERVGACTLVAADSETVDRAFSQMKAAI-RANYS-NPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF  325 (396)
T ss_dssp             TTCGGGCCEEEEEECSSHHHHHHHHHHHHHHH-HTTTS-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred             ccccccccceEEEEcCCHHHHHHHHHHHHHHH-hhccC-CCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            98666   88876   55    3444443211 11222 24777777777776432       12234567788889999


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      .+.|++.....++.+..+..+.++++.+.           ...+.+.|.++||++.+             .+||+++. .
T Consensus       326 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gv~v~~-------------~~Ris~~~-~  380 (396)
T 2q7w_A          326 VNTLQEKGANRDFSFIIKQNGMFSFSGLT-----------KEQVLRLREEFGVYAVA-------------SGRVNVAG-M  380 (396)
T ss_dssp             HHHHHHTTCCSCCTHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCT-------------TCEEEGGG-C
T ss_pred             HHHHHhcCCCCCcceecCCCceEEEecCC-----------HHHHHHHHHhcCeeecC-------------CceEEEee-c
Confidence            99998721000254443444555554321           12455666788998764             36999985 4


Q ss_pred             CHHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCKS  447 (457)
Q Consensus       433 t~edi~~~~~~l~~~  447 (457)
                      |++++++++++|+++
T Consensus       381 ~~e~i~~~~~~l~~~  395 (396)
T 2q7w_A          381 TPDNMAPLCEAIVAV  395 (396)
T ss_dssp             CTTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999999875

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.95  E-value=6.9e-27  Score=233.40  Aligned_cols=346  Identities=12%  Similarity=0.014  Sum_probs=228.0

Q ss_pred             eEEeecCCccC---CCCChhhHHHHHHHHH-hcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH--
Q psy15447         82 CINFATHNYLS---FVENPDIEKCAIDCID-KNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS--  153 (457)
Q Consensus        82 ~id~~s~~~l~---~~~~p~i~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~--  153 (457)
                      ++||+.+.+ .   +...+.+.+++.+++. ..+...    ..|+...-..+|++.++++++.+  ++++++++++++  
T Consensus        34 ~i~l~~g~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l  108 (422)
T 3d6k_A           34 SLDLTRGKP-SAEQLDLSNDLLSLPGGDFRTKDGVDC----RNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMF  108 (422)
T ss_dssp             CEECCCCSC-CHHHHHTTGGGGGCSTTCCBCTTCCBT----TSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHH
T ss_pred             eEeCCCCCC-ChhhCCCcHHHHHHHHHHHhhccchhh----hCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHH
Confidence            689988765 2   3334577777665421 111111    11222222477888999988854  455556666776  


Q ss_pred             HHHHHhhcCC------------CCEEEEeCcccHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCc
Q psy15447        154 ASAIAAYVKR------------NDAVFVDENINFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       154 ~~ai~a~~~~------------gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      ..++.++..+            +|.|++..++|..+...++..|.++..++.    .|++++++.+++          .+
T Consensus       109 ~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~----------~~  178 (422)
T 3d6k_A          109 DLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDEGPDMGVVRELVKD----------PQ  178 (422)
T ss_dssp             HHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETTEECHHHHHHHHTS----------TT
T ss_pred             HHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhc----------CC
Confidence            5566766655            347999999999998888888998887765    378999888853          23


Q ss_pred             cEEEE-EecCCCCCCCCCChH---HHHHHHH-HcCcEEEEEcCcccccccCCCCccccccC----CCCCCccEEEecCcc
Q psy15447        218 KKFII-VEGVYMNSADICPLK---DILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFG----VSTEEVDMIIGSLEH  288 (457)
Q Consensus       218 ~~~vi-~e~v~~~~G~i~~l~---~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~----~~~~~~Di~~~s~sK  288 (457)
                      +++|+ +++++||+|.+.|.+   +|.++|+ +||+++|+||+|+.+.++..+........    ....+.+++++||||
T Consensus       179 ~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK  258 (422)
T 3d6k_A          179 VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSK  258 (422)
T ss_dssp             EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTT
T ss_pred             CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhh
Confidence            46666 678999999999965   7788888 99999999999985334332321111100    111234699999999


Q ss_pred             ccc--CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH----hhCcHHHHHHHHHHHHHHHHhhcc-cc
Q psy15447        289 ALG--SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL----KANPSLLTKLREKCNTMHSLLSQH-KV  361 (457)
Q Consensus       289 ~lg--~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~----~~~~~~~~~l~~~~~~l~~~L~~~-~~  361 (457)
                      +.+  .+.||+++++++++.+......+  +.+.+++.++++.++++..    +...+.++.++++.+++.+.|++. ..
T Consensus       259 ~~~~GlriG~~~~~~~l~~~l~~~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~  336 (422)
T 3d6k_A          259 ITHAGSGVSFFASSKENIEWYASHANVR--GIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSE  336 (422)
T ss_dssp             TSCTTSSCEEEECCHHHHHHHHHHHHHH--CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             hcCcccceEEEEeCHHHHHHHHHHHHhh--cCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            842  23499999999988886543222  2335777777777776431    112234566666777777777541 11


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc-ccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP-SHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      ..++.+..+..+.++++.++..        ....+.+.|.++||.+++. .++........+++||+++. +++++++++
T Consensus       337 ~~~~~~~~p~~g~~~~~~~~~~--------~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~  407 (422)
T 3d6k_A          337 YGVAKWTSPTGGYFISVDVVPG--------TASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVA  407 (422)
T ss_dssp             GTCEEECCCSBSSCEEEEESTT--------CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHH
T ss_pred             CCceEEeCCCcceEEEEECCCC--------CHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHH
Confidence            1236665555678888888653        1245778888999999883 32210000135799999987 899999999


Q ss_pred             HHHHHHHHHHhcC
Q psy15447        441 IETLCKSHDIAVQ  453 (457)
Q Consensus       441 ~~~l~~~~~~~~~  453 (457)
                      +++|+++++++..
T Consensus       408 ~~~l~~~l~~~~~  420 (422)
T 3d6k_A          408 MDGFATCVLMAAL  420 (422)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999887643

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.95  E-value=1.7e-26  Score=227.25  Aligned_cols=296  Identities=14%  Similarity=0.114  Sum_probs=210.7

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEE-ecccHHHHHHHHHhhcCCCCEEEEeCcccHH-HHHH-HHhcC--CeEEEec------
Q psy15447        124 NVVHLDLENDIASFMGLEETAL-YSFGFSTSASAIAAYVKRNDAVFVDENINFA-IQTG-LIASR--CKVQYFK------  192 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~-~~~~-~~~~g--~~~~~~~------  192 (457)
                      .+...++++++++++|.+..++ ++||++|+..++..+ .+||.|++..+.|.+ .+.. ....|  .++..++      
T Consensus        34 ~~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~  112 (379)
T 3ke3_A           34 QEVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTED  112 (379)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccccc
Confidence            3566788899999999876554 568999999888654 688888776665544 3222 23334  3444433      


Q ss_pred             --------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccc
Q psy15447        193 --------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTL  261 (457)
Q Consensus       193 --------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~  261 (457)
                              ..|++++++.+++.          ++++|++.++.+++|.+.|   +++|+++|++||+++|+|++++ |..
T Consensus       113 ~~~~~~~~~~d~~~l~~~i~~~----------~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~  181 (379)
T 3ke3_A          113 TEAPKPFAPVDIETAVAKIKED----------KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCV  181 (379)
T ss_dssp             CSSCCCEECCCHHHHHHHHHHH----------TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTC
T ss_pred             ccccCCCCCCCHHHHHHHHhhc----------CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCc
Confidence                    36899999998642          3457888888889999999   9999999999999999999987 522


Q ss_pred             cCCCCccccccCCCCCCccEEEecCcccccC-cc-cEEEecHHHHHHHHhhC-Ccc-------------------eecCC
Q psy15447        262 GSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VG-GFCVGSSYIIEHHRLSG-SGY-------------------CFSAS  319 (457)
Q Consensus       262 g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~~~~~~~~~~~-~~~-------------------~~~~~  319 (457)
                      .    .....+     ++|+++.|++|++++ .| |++++++++++.+.... .++                   .++++
T Consensus       182 ~----~~~~~~-----~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t  252 (379)
T 3ke3_A          182 W----LDMKEL-----GIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHAT  252 (379)
T ss_dssp             C----CCHHHH-----TCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSC
T ss_pred             c----cccccc-----CCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCC
Confidence            1    111222     458999999999964 33 88999999888876421 111                   12235


Q ss_pred             CcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCcchHHHHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSDDEVASKKLLQT  395 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~  395 (457)
                      .++..++++.++++.+.+.  +++.++.+++.+++++.|++    .|+++..+.  .++++.....+..       . ..
T Consensus       253 ~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~----~g~~~~~~~~~~~~~i~~~~~~~~-------~-~~  320 (379)
T 3ke3_A          253 MPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTD----KGIESVAAEGFEAPGVVVSYTERD-------D-MH  320 (379)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSBCTTCBCSSEEEEECSCH-------H-HH
T ss_pred             CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH----cCCEecCCccccCceEEEEccCCc-------c-hH
Confidence            6788888888899887654  56788999999999999988    466665433  2454433322221       1 12


Q ss_pred             HHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        396 ICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       396 ~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.+.|.++||.+.++.+|....+...+++||+++..+|++||++++++|+++++++.
T Consensus       321 ~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          321 KGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             SSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            367788999999887654332233367999999999999999999999999988765

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.95  E-value=1.3e-26  Score=231.35  Aligned_cols=332  Identities=9%  Similarity=-0.002  Sum_probs=223.1

Q ss_pred             CeeeEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC--cEEEecc
Q psy15447         79 GIPCINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE--ETALYSF  148 (457)
Q Consensus        79 G~~~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~--~~i~~~s  148 (457)
                      +..+|||+.+.|+...    ..|.+++++.+++++...  ..+....|..++.+++++.+....+    .+  .++++++
T Consensus        48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G  125 (420)
T 4f4e_A           48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLP--RGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALG  125 (420)
T ss_dssp             CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCC--CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEH
T ss_pred             CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCC--CCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCc
Confidence            3578999988544322    237899999999886221  1122234556666666666655443    34  5677788


Q ss_pred             cHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        149 GFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N---NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       149 G~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      |++|+..++  .+++++||.|+++.++|..+...++..|.++..++.    +   |++++++.+++..        ++++
T Consensus       126 ~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~--------~~~~  197 (420)
T 4f4e_A          126 GTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYE--------PGTI  197 (420)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTCC--------TTCE
T ss_pred             cHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhCC--------CCCE
Confidence            889999884  456899999999999999999999999999888876    3   7999999987532        4568


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCccccccCCCCCCccEEEecCcccccCcc
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      ++++++++||+|.+.+   +++|+++|++||+++|+||+|+...++..  ...+....+.  .+.+++++|+||.+|+.|
T Consensus       198 ~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G  275 (420)
T 4f4e_A          198 VVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAA--NLNVFVSSSFSKSFSLYG  275 (420)
T ss_dssp             EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHT--TCCEEEEEECTTTTTCGG
T ss_pred             EEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhc--CCCEEEEEeCCccCcCcC
Confidence            9999999999999987   66899999999999999999976555421  1111122122  233688999999998766


Q ss_pred             ---cEEE---ecHHHHHHHHhhCC---cceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        295 ---GFCV---GSSYIIEHHRLSGS---GYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       295 ---G~v~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                         ||++   .++++++.+.....   ...++ +.+++.++++.+.++.       .+..++++++++++.+++.+.|++
T Consensus       276 ~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  354 (420)
T 4f4e_A          276 ERVGALSIITDSKDEAARVLSQLKRVIRTNYS-NPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKA  354 (420)
T ss_dssp             GCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEEEcCCHHHHHHHHHHHHHHHhcccC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               8864   35565544321110   01122 2344444444444432       111245778889999999999988


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      +....++.+..+..+.+.++.+.           ...+.+.+.++||++.+.             .|++++ .+|+++++
T Consensus       355 ~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~l~~~gI~v~~~-------------~Ris~~-~~~~~~i~  409 (420)
T 4f4e_A          355 AGIERDFSFINAQRGMFSYSGLT-----------SAQVDRLREEFGIYAVST-------------GRICVA-ALNTRNLD  409 (420)
T ss_dssp             TTCSSCCTHHHHSCSSEEECCCC-----------HHHHHHHHHHHCEECCTT-------------SEEEGG-GCCTTTHH
T ss_pred             cCCCCCceeECCCccEEEEeCCC-----------HHHHHHHHHhCCEEecCC-------------CeEEEe-cCCHHHHH
Confidence            32113555544455666554332           124566677889988652             388885 35788899


Q ss_pred             HHHHHHHHHH
Q psy15447        439 SLIETLCKSH  448 (457)
Q Consensus       439 ~~~~~l~~~~  448 (457)
                      +++++|++++
T Consensus       410 ~~~~~l~~~l  419 (420)
T 4f4e_A          410 VVANAIAAVL  419 (420)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.95  E-value=1.4e-25  Score=221.40  Aligned_cols=287  Identities=13%  Similarity=0.150  Sum_probs=210.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+.+++++||++|+..+++++.++||.|++..+.|+++...    ++..|.++..++..|+++
T Consensus        57 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~  136 (389)
T 3acz_A           57 GNPTVEQFEEMVCSIEGAAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEK  136 (389)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHH
T ss_pred             CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHH
Confidence            3677899999999999999999999999999999999999999999999999887665    467899999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+..+.   .    .+   .+
T Consensus       137 l~~~i~~-----------~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~---~----~~---~~  195 (389)
T 3acz_A          137 VKAAWKP-----------NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLK---P----LE---LG  195 (389)
T ss_dssp             HHHTCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCC---G----GG---TT
T ss_pred             HHHhcCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccC---c----cc---cC
Confidence            9887743           45799999999999999999999999999999999999998664321   1    11   23


Q ss_pred             ccEEEecCcccccCc----ccEEEecH-HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSS-YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +|+++.|++|++|+.    ||++++++ ++++.++....  .++.+.+|..++++++.++.+.   .++++..++...+.
T Consensus       196 ~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~r~~~~~~~~~~l~  270 (389)
T 3acz_A          196 ADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRK--DAGSLMAPMDAFLCARGMKTLP---IRMQIHMENGLKVA  270 (389)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHcCccHHH---HHHHHHHHHHHHHH
Confidence            589999999999754    68999988 88887764331  2444568888888777775442   35566777777777


Q ss_pred             HHhhccccc-----------CCeEEec---cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc---------
Q psy15447        354 SLLSQHKVT-----------QRFLVQG---HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP---------  410 (457)
Q Consensus       354 ~~L~~~~~~-----------~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---------  410 (457)
                      +.|++...+           +++.+..   ...++++.+.+++ .         .++.+.+.+.|+.+...         
T Consensus       271 ~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-~---------~~~~~~l~~~~i~~~~~s~G~~~sl~  340 (389)
T 3acz_A          271 KFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-F---------EAAKKLMEHLKVCTLAVSLGCVDTLI  340 (389)
T ss_dssp             HHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-H---------HHHHHHHTTCSSSEEBSCCCCSSCEE
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-H---------HHHHHHHHhCCCcEECcCCCCcccEe
Confidence            777763111           1111111   1236788887754 2         13445566678887663         


Q ss_pred             ccCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        411 SHLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       411 ~~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                      .+|...            ....++.+|++++...+++.++.+.++|+
T Consensus       341 ~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~  387 (389)
T 3acz_A          341 EHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALE  387 (389)
T ss_dssp             ECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHT
T ss_pred             eCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHh
Confidence            222210            01125799999988766666666655553

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.95  E-value=2.1e-26  Score=229.27  Aligned_cols=340  Identities=11%  Similarity=0.092  Sum_probs=215.0

Q ss_pred             CeeeEEeecCCccCCCCChh----hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc----C----CCcEEEe
Q psy15447         79 GIPCINFATHNYLSFVENPD----IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM----G----LEETALY  146 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~----i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~~~i~~  146 (457)
                      +..++||+.+.+-.   .|.    +.+++.+.+.+....  .....|+......+|++.+|+++    |    .++++++
T Consensus        30 ~~~~i~l~~g~p~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t  104 (417)
T 3g7q_A           30 TPGAIMLGGGNPAH---IPAMQDYFQTLLTDMVESGKAA--DALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALT  104 (417)
T ss_dssp             --CCEECSCCCCCC---CHHHHHHHHHHHHHHHHHTHHH--HHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred             CCCceEecCcCCCC---CChHHHHHHHHHHHHhhCCccc--ceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEe
Confidence            35688998764422   344    444444444331100  00011222233456666666654    3    3577888


Q ss_pred             cccHHHHHHHHHhhcCCCC-----EEEEe-CcccHHHHHHHHh------cCCeEEEecC------CCHHHHHHHHHhhch
Q psy15447        147 SFGFSTSASAIAAYVKRND-----AVFVD-ENINFAIQTGLIA------SRCKVQYFKH------NNMQHLEELLRQQDE  208 (457)
Q Consensus       147 ~sG~~a~~~ai~a~~~~gd-----~v~~~-~~~h~~~~~~~~~------~g~~~~~~~~------~d~~~le~~l~~~~~  208 (457)
                      ++|++|+..++++++++||     .|++. .+.|..+......      .+..+..++.      .|+++++  +   . 
T Consensus       105 ~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~---~-  178 (417)
T 3g7q_A          105 NGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--I---G-  178 (417)
T ss_dssp             SCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--C---C-
T ss_pred             CCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--c---c-
Confidence            8899999999999999987     78885 7777766544321      1233444433      2677766  2   1 


Q ss_pred             hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEec
Q psy15447        209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGS  285 (457)
Q Consensus       209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s  285 (457)
                             +++++|++++++||+|.+.|   +++|+++|++||+++|+||+|+.+..+....+..    ....+.++++.|
T Consensus       179 -------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~----~~~~~~~i~~~s  247 (417)
T 3g7q_A          179 -------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEAR----PLWNPNIILCMS  247 (417)
T ss_dssp             -------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC----CCCCTTEEEEEE
T ss_pred             -------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccc----cCCCCCEEEEEe
Confidence                   35678889999999999999   8899999999999999999997532211111110    011245799999


Q ss_pred             CcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hCc-HHHHHHHHHHHHHHHHhhc
Q psy15447        286 LEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---ANP-SLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       286 ~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~~-~~~~~l~~~~~~l~~~L~~  358 (457)
                      +|| ++++|   ||+++++++++.+......+.++  .+++.++++.+.++...   ... .++++++++.+.+.+.|++
T Consensus       248 ~sK-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (417)
T 3g7q_A          248 LSK-LGLPGSRCGIIIANDKTITAIANMNGIISLA--PGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR  324 (417)
T ss_dssp             SGG-GTCTTSCCEEEECCHHHHHHHHHHHHHHCCC--CCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             chh-ccCCCcceEEEEeCHHHHHHHHHhhcceeeC--CCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 55444   99999999998887544333333  35666666655554211   111 1456677777777777765


Q ss_pred             ccccCCeEEeccCCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCC----CCCeEEEEecCCCC
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK----QKPSIRITCNISHT  433 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~----~~~~lRi~~~~~~t  433 (457)
                      .....++.+..+..+.++++.++. ..       ...++.+.|.++||.+.++..+......    ..+++||+++.  |
T Consensus       325 ~l~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~  395 (417)
T 3g7q_A          325 YLSEERCLIHKPEGAIFLWLWFKDLPI-------TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--E  395 (417)
T ss_dssp             HCCTTTCEEECCCBSSEEEEECTTCSS-------CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--C
T ss_pred             hcccCCceeeCCCcceEEEEEcCCCCC-------CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--C
Confidence            210125666656668888888875 23       3457889999999999987654220000    14689999985  9


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q psy15447        434 EQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       434 ~edi~~~~~~l~~~~~~~~  452 (457)
                      ++++++++++|+++++++.
T Consensus       396 ~~~i~~~~~~l~~~l~~~~  414 (417)
T 3g7q_A          396 PDKIEAGVKILAEEIERAW  414 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999988764

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.95  E-value=1.6e-26  Score=235.36  Aligned_cols=345  Identities=15%  Similarity=0.087  Sum_probs=238.6

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-------cEEEecccH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-------ETALYSFGF  150 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~i~~~sG~  150 (457)
                      +|+..+++++  +.....+|.+.+++.+.+......+.   ...+..+...++.+.+++++|.+       ..+++++|+
T Consensus        53 ~gnp~~~l~s--~~t~~~~~~v~~~l~~~~~~~~~~~~---~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggt  127 (502)
T 3hbx_A           53 DGNPRLNLAS--FVTTWMEPECDKLIMSSINKNYVDMD---EYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS  127 (502)
T ss_dssp             SCCGGGBTTC--CSCCCCCHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHH
T ss_pred             CCCCCceecc--ccCCCCCHHHHHHHHHHhccCCCChh---cChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHH
Confidence            5666555544  22233578899988888765433221   11234566667888899999977       345688999


Q ss_pred             HHHHHHHHhhcCC--------CC-----EEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcc
Q psy15447        151 STSASAIAAYVKR--------ND-----AVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDT  211 (457)
Q Consensus       151 ~a~~~ai~a~~~~--------gd-----~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~  211 (457)
                      +|+..++.++..+        |+     .|+++...|.++..+++..|.+++.++.+      |++++++.+.+      
T Consensus       128 ea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~------  201 (502)
T 3hbx_A          128 EAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDE------  201 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCT------
T ss_pred             HHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhh------
Confidence            9999888877554        66     89999999999999999999998888743      78888887753      


Q ss_pred             cCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc------CcEEEEEcCcccccc---cCCCCccccccCCCCCCccEE
Q psy15447        212 LNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY------QARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMI  282 (457)
Q Consensus       212 ~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~  282 (457)
                           ++++|+++.+++++|.+.|+++|.++|++|      |+++++|++|+.+..   .....     +.+...++|++
T Consensus       202 -----~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~-----~~~~~~~~D~v  271 (502)
T 3hbx_A          202 -----NTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELE-----WDFRLPLVKSI  271 (502)
T ss_dssp             -----TEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-----CSTTSTTEEEE
T ss_pred             -----CCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccc-----cccCCCCceEE
Confidence                 457888888999999999999999999999      999999999986542   22111     11222477999


Q ss_pred             EecCcccccC-cc-cEE-EecHHHHHHHHhhCCcc--------eecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHH
Q psy15447        283 IGSLEHALGS-VG-GFC-VGSSYIIEHHRLSGSGY--------CFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKC  349 (457)
Q Consensus       283 ~~s~sK~lg~-~g-G~v-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~  349 (457)
                      ..+.+|.+++ .| |++ +.++..+.........|        .+..+.+...+++..++++.+..  ..+++++..+++
T Consensus       272 ~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a  351 (502)
T 3hbx_A          272 NVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENM  351 (502)
T ss_dssp             EEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999843 22 544 44444331111000011        11122222233333344444322  245778888999


Q ss_pred             HHHHHHhhcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        350 NTMHSLLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       350 ~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++|.+.|++   .+++++..+ +..+++.+.+......     ...++.+.|.++|+++.....|..  ..+..++|+++
T Consensus       352 ~~l~~~L~~---~~~~~~~~~~~~~~~v~f~~~~~~~~-----~~~~l~~~L~~~Gi~v~~~~~p~~--~~~~~~lRisv  421 (502)
T 3hbx_A          352 IVLREGLEK---TERFNIVSKDEGVPLVAFSLKDSSCH-----TEFEISDMLRRYGWIVPAYTMPPN--AQHITVLRVVI  421 (502)
T ss_dssp             HHHHHHHHT---TTCEEECSCSSSSSEEEEEESSCSSC-----CHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEEC
T ss_pred             HHHHHHHHh---CCCEEEEeCCCCceEEEEEecCCCcC-----CHHHHHHHHHhCCcEEeeccCCcc--cCCceEEEEEe
Confidence            999999998   456888755 5788888888653210     345789999999999865444322  22346899999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ...+|++|++++++.|+++++.+.+
T Consensus       422 ~~~~t~edid~li~~L~~~l~~l~~  446 (502)
T 3hbx_A          422 REDFSRTLAERLVIDIEKVMRELDE  446 (502)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999987754

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.95  E-value=8.9e-27  Score=231.58  Aligned_cols=324  Identities=10%  Similarity=0.040  Sum_probs=218.8

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-CCC-------cE--EEeccc
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-GLE-------ET--ALYSFG  149 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~-------~~--i~~~sG  149 (457)
                      ..+|||+.++|+++.++|.+.+++.++...   ...++    +......+|++.+++++ |.+       .+  ..+.+|
T Consensus        41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~---~~~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g  113 (409)
T 4eu1_A           41 KRKVNLSIGVYRDDADQPFVLECVKQATLG---TNMDY----APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGG  113 (409)
T ss_dssp             SSCEECCCSSCCCTTSCCCCCHHHHTCCCC---SCCCC----CCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHH
T ss_pred             cCceeeeeeEEECCCCCEeecHHHHhcCcc---ccccC----CCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccc
Confidence            568999999998888888899988877221   11111    12222356777777754 532       33  346777


Q ss_pred             HHHHHHH---HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        150 FSTSASA---IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       150 ~~a~~~a---i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      ++++..+   +.+++++||.|+++.++|..+...++..|.++..++.       .|++++++.+++..        ++++
T Consensus       114 ~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~  185 (409)
T 4eu1_A          114 TGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAP--------EGSV  185 (409)
T ss_dssp             HHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSC--------TTCE
T ss_pred             hHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCC--------CCcE
Confidence            7777654   4567789999999999999999999999999988875       27899999987532        3457


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC---CCCccccccCCCCCCccEEEecCcccccCc
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS---TGHGVTEYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~---~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      ++++++++||+|.+.+   +++|.++|++||+++|+||+|+.+.++.   .+.+.....+..+  ..++++|+||++|.+
T Consensus       186 ~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~S~SK~~g~~  263 (409)
T 4eu1_A          186 ILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP--NLIVAQSFSKNFGLY  263 (409)
T ss_dssp             EEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS--CCEEEEECTTTSSCG
T ss_pred             EEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC--cEEEEecCcccccCc
Confidence            7888889999999998   5569999999999999999987655442   1122222223322  248899999999876


Q ss_pred             c---cEE---EecHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHh
Q psy15447        294 G---GFC---VGSSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       294 g---G~v---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L  356 (457)
                      |   ||+   +++++    +++.++......  ..+.+++.++++.++++.       .+..++.+++++++.+++.+.|
T Consensus       264 G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L  341 (409)
T 4eu1_A          264 GHRCGALHISTASAEEAKRLVSQLALLIRPM--YNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSEL  341 (409)
T ss_dssp             GGCCEEEEEECSSHHHHHHHHHHHHHHHHHH--HSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCceEEEEEeCCHHHHHHHHHHHHHHHhhh--cCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6   884   67777    555554322111  223466776667666652       2223457788999999999999


Q ss_pred             hcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        357 SQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      ++...-.++.+..+..+.+.++.+  +.          +++..++ ++||++.+.             .||+++. ++++
T Consensus       342 ~~~g~~~~~~~~~~~~~~~~~~~~--~~----------~~~~~ll~~~gv~v~p~-------------~Ri~~~~-~~~~  395 (409)
T 4eu1_A          342 KACGSVHDWSHIERQVGMMAYTGL--TR----------EQVELLRSEYHIYMTLN-------------GRAAVSG-LNST  395 (409)
T ss_dssp             HHTTCCSCCHHHHHSCSSEEECCC--CH----------HHHHHHHHHHCEECCTT-------------CEEEGGG-CCTT
T ss_pred             HhcCCCCCcceecCCceEEEEeCC--CH----------HHHHHHHHcCCEEEcCC-------------CEEEEEe-cCHh
Confidence            882100014444344454444322  21          3455555 569988642             4788754 6778


Q ss_pred             HHHHHHHHHHHHH
Q psy15447        436 DMNSLIETLCKSH  448 (457)
Q Consensus       436 di~~~~~~l~~~~  448 (457)
                      |+++++++|++++
T Consensus       396 ~i~~~~~~l~~~l  408 (409)
T 4eu1_A          396 NVEYVSQAIHNVT  408 (409)
T ss_dssp             THHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHh
Confidence            8999999998875

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.95  E-value=2.1e-26  Score=232.92  Aligned_cols=346  Identities=14%  Similarity=0.091  Sum_probs=223.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      .|++||||.++.+.     |++.+++.+++.. +.      ..|+..+...+|++++++++|.+.+++++||++|+..++
T Consensus        39 ~~~~ylD~~~~~~~-----~~v~~a~~~~l~~-~~------~~y~~~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al  106 (467)
T 2oqx_A           39 SEDVFIDLLTDSGT-----GAVTQSMQAAMMR-GD------EAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYI  106 (467)
T ss_dssp             GGGCSEECSCCSSC-----SCCCHHHHHHTTS-CC------CCSSSCHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHH
T ss_pred             CCCeeEecccCCCc-----HHHHHHHHHHhcc-Cc------ceeccCchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHH
Confidence            47889999775432     8899999888753 11      124456677899999999999999999999999999999


Q ss_pred             HhhcCC-----C----CEEEEeCcccHHHH-HHHHhcCCeEEEe--------------cC-CCHHHHHHHHHhhchhccc
Q psy15447        158 AAYVKR-----N----DAVFVDENINFAIQ-TGLIASRCKVQYF--------------KH-NNMQHLEELLRQQDERDTL  212 (457)
Q Consensus       158 ~a~~~~-----g----d~v~~~~~~h~~~~-~~~~~~g~~~~~~--------------~~-~d~~~le~~l~~~~~~~~~  212 (457)
                      ++++++     |    |.|+.. .+|+... ......+..+...              .. .|+++|++.+++..     
T Consensus       107 ~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~-----  180 (467)
T 2oqx_A          107 PVLIKKREQEKGLDRSKMVAFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG-----  180 (467)
T ss_dssp             HHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC-----
T ss_pred             HHHhccccccCCCCccceEEec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC-----
Confidence            998877     7    877776 5675433 3333444443321              11 28999999997532     


Q ss_pred             CCCCccEEEEEecCCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcCccc-ccc-------cCCCCccccccCCC-CCCc
Q psy15447        213 NSKVTKKFIIVEGVYMNS-ADICP---LKDILSLRSKYQARIFVDESVSF-GTL-------GSTGHGVTEYFGVS-TEEV  279 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~-G~i~~---l~~i~~l~~~~g~~li~DEa~~~-g~~-------g~~g~~~~~~~~~~-~~~~  279 (457)
                        .+++++|++++++|++ |.+.+   +++|+++|++||++||+|++|++ +.+       +..|..... ++.. ...+
T Consensus       181 --~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~-~~~~~~~~~  257 (467)
T 2oqx_A          181 --PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQ-ITRETYKYA  257 (467)
T ss_dssp             --GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHH-HHHHHGGGC
T ss_pred             --CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHH-HhhhhhccC
Confidence              0256789999999986 77766   78999999999999999988876 433       222221111 1100 0123


Q ss_pred             cEEEecCcccccCc-ccEEEecHH-HHHH---HHhh---CCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGSV-GGFCVGSSY-IIEH---HRLS---GSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       280 Di~~~s~sK~lg~~-gG~v~~~~~-~~~~---~~~~---~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      |+++.|+||++|++ ||+++++++ +++.   ++..   ..+....+..+...+++....++... .++..++.+++.++
T Consensus       258 d~~~~s~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~-~~~~~~~~~~~~~~  336 (467)
T 2oqx_A          258 DMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGM-NLDWLAYRIAQVQY  336 (467)
T ss_dssp             SEEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHH
T ss_pred             CeEEEecccccCCCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhh-hHHHHHHHHHHHHH
Confidence            67788999999876 788888765 4333   3221   11111111223222222112222111 12355667788999


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecC---CcchHHHHHHHHHHHHHH-HHcCeeEeccccCcc--------ccCC
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK---SDDEVASKKLLQTICDMC-IQAGFAITCPSHLDQ--------EAKK  419 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~--------~~~~  419 (457)
                      +.+.|++    .++++. +..+.++++.+..   ..+..  .....++++.| .++||.+.+...+..        ....
T Consensus       337 l~~~L~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~  409 (467)
T 2oqx_A          337 LVDGLEE----IGVVCQ-QAGGHAAFVDAGKLLPHIPAD--QFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPC  409 (467)
T ss_dssp             HHHHHHH----TTCCEE-EECSSCEEEEHHHHSTTSCGG--GCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCC
T ss_pred             HHHHHHH----CCCeee-cCCceEEEEechhhcccCCcc--cccHHHHHHHHHHhcCceecccccccccccccccccccC
Confidence            9999988    266665 5567778887642   11100  00145678888 888999987432100        0011


Q ss_pred             CCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447        420 QKPSIRITCNIS-HTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       420 ~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..+++|++++.. +|++|+++++++|+++++...
T Consensus       410 ~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~  443 (467)
T 2oqx_A          410 PAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA  443 (467)
T ss_dssp             SCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred             ccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence            237999999998 999999999999999987654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.95  E-value=3.9e-26  Score=226.47  Aligned_cols=289  Identities=16%  Similarity=0.173  Sum_probs=215.9

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++|+++|.+.+++++||++|+..++.+++++||.|++..+.|.++...+    ...|.++..++.+|+++
T Consensus        80 ~~p~~~~le~~lA~l~g~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~  159 (415)
T 2fq6_A           80 GTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGAD  159 (415)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGG
T ss_pred             CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence            46788999999999999998999999999999999999999999999999998877554    34588999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK--YQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++++++           ++++|++|+++|++|.+.|+++|.++|++  ||+++|+|++|+.+...   ..+    .   
T Consensus       160 le~ai~~-----------~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~---~p~----~---  218 (415)
T 2fq6_A          160 IVKHLQP-----------NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLF---KAL----D---  218 (415)
T ss_dssp             GGGGCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSS---CGG----G---
T ss_pred             HHHhhcc-----------CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccC---Ccc----c---
Confidence            8887743           46899999999999999999999999999  99999999999865322   111    1   


Q ss_pred             CCccEEEecCcccccCc----ccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSV----GGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~----gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      .++|+++.|++|.+|+.    ||++++++++++.++...  ..+++.++|..++.++.+++.+.   .++++..++...+
T Consensus       219 ~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~--~~~G~~~~~~~a~~~~~~l~~l~---~r~~~~~~n~~~l  293 (415)
T 2fq6_A          219 FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA--YLMGQMVDADTAYITSRGLRTLG---VRLRQHHESSLKV  293 (415)
T ss_dssp             GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH--HHTTCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred             cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHH
Confidence            24589999999999753    589999888877775432  12344567877776766666553   3667778888889


Q ss_pred             HHHhhcccccCCeEE---ec--------------cCCCCeEEEEecCC--cchHHHHHHHHHHHHHHHHcCeeEeccccC
Q psy15447        353 HSLLSQHKVTQRFLV---QG--------------HRDTPLKYLYLQKS--DDEVASKKLLQTICDMCIQAGFAITCPSHL  413 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~---~~--------------~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~  413 (457)
                      .+.|++.   +.+.-   .+              ...+.++++.+++.  .      ....++.+.|.-.++.++.+..+
T Consensus       294 ~~~L~~~---~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~------~~~~~~l~~l~~~~~a~s~G~~~  364 (415)
T 2fq6_A          294 AEWLAEH---PQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNN------EELANYLDNFSLFSMAYSWGGYE  364 (415)
T ss_dssp             HHHHHTC---TTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCH------HHHHHHHTTCSSCEECSCCCSSS
T ss_pred             HHHHHcC---CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCH------HHHHHHHHhCCcCeEeccCCCCc
Confidence            8888873   33321   11              12467889988763  1      14455665554345555433221


Q ss_pred             c--------c--------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        414 D--------Q--------EAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       414 ~--------~--------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      +        .        .....++.+|+++....++++++.+.++|++
T Consensus       365 s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          365 SLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             CEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             eeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence            1        0        0112257899999999999999999998874

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.95  E-value=1e-26  Score=231.29  Aligned_cols=331  Identities=8%  Similarity=-0.011  Sum_probs=221.1

Q ss_pred             CCeeeEEeecCCccCCC----CChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc-C-------CCcEE
Q psy15447         78 NGIPCINFATHNYLSFV----ENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM-G-------LEETA  144 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~----~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g-------~~~~i  144 (457)
                      +|++++||+++.|+++.    ..|.+.+++.+ +++....  .+    |+......++++.+++++ +       .+.++
T Consensus        27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~--~~----y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~  100 (412)
T 1yaa_A           27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYN--HE----YLGITGLPSLTSNAAKIIFGTQSDALQEDRVI  100 (412)
T ss_dssp             CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCC--CC----CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred             CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccc--cC----CCCCCCcHHHHHHHHHHHhcCCCCCCCcceEE
Confidence            35778999998886664    34778888887 7652111  11    112222355666666655 2       45677


Q ss_pred             E--ecccHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccC
Q psy15447        145 L--YSFGFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLN  213 (457)
Q Consensus       145 ~--~~sG~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~  213 (457)
                      +  +++|++|+..++  .....+||.|++..++|..+...++..|.++..++.       .|++++++.+++..      
T Consensus       101 ~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~------  174 (412)
T 1yaa_A          101 SVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP------  174 (412)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC------
T ss_pred             EEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhCC------
Confidence            7  888899998874  344568999999999999888888888998887776       27899999887521      


Q ss_pred             CCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC---CCCccccccCCCCCC--ccEEEec
Q psy15447        214 SKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS---TGHGVTEYFGVSTEE--VDMIIGS  285 (457)
Q Consensus       214 ~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~---~g~~~~~~~~~~~~~--~Di~~~s  285 (457)
                        ..++++++++++||+|.+.+   +++|.++|++||+++|+||+|+...++.   .+..+....... ++  .+++++|
T Consensus       175 --~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s  251 (412)
T 1yaa_A          175 --EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL-STVSPVFVCQS  251 (412)
T ss_dssp             --TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT-TTTCCEEEEEE
T ss_pred             --CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC-CCCcceEEEec
Confidence              23466777999999999987   5688999999999999999996543331   111121211111 11  3688999


Q ss_pred             CcccccCcc---cEEE--e-----cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-------hCcHHHHH
Q psy15447        286 LEHALGSVG---GFCV--G-----SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-------ANPSLLTK  344 (457)
Q Consensus       286 ~sK~lg~~g---G~v~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-------~~~~~~~~  344 (457)
                      +||++|+.|   ||++  +     +++    +++.+..... ..+ .+.+++.++++.++++...       ..++.+++
T Consensus       252 ~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  329 (412)
T 1yaa_A          252 FAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIR-SEV-SNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSR  329 (412)
T ss_dssp             CTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHH-TTT-SSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHh-hcc-CCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            999998766   8887  7     666    6666654211 112 2336777777777775431       23457788


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI  424 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l  424 (457)
                      ++++.+++.+.|+++....++.+..+..+.+.++.+  +         ...+.+.+.++||.+.+             .+
T Consensus       330 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~l~~~gi~v~~-------------~~  385 (412)
T 1yaa_A          330 ITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL--T---------PQMVKRLEETHAVYLVA-------------SG  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC--C---------HHHHHHHHHHHCEECCT-------------TS
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC--C---------HHHHHHHHHhCCEEecc-------------Cc
Confidence            888999999999872100025554344444444322  1         12454445578998763             47


Q ss_pred             EEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        425 RITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       425 Ri~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ||+++. +|++++++++++|+++++.
T Consensus       386 Ris~~~-~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          386 RASIAG-LNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             EEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred             EEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence            999974 6999999999999998864

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.95  E-value=2.3e-25  Score=222.42  Aligned_cols=323  Identities=10%  Similarity=0.076  Sum_probs=229.0

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccC-hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcC
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGT-NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVK  162 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~-~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~  162 (457)
                      ||..+.+ .+...+++.+++.+.++. +.        |+. .+...++++.+++++|.+.++++++|++|+..++.++. 
T Consensus        20 ~l~~~~p-~~~~p~~~~~a~~~~~~~-~~--------y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~-   88 (424)
T 2po3_A           20 PLLVGRP-NRIDRARLYERLDRALDS-QW--------LSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAG-   88 (424)
T ss_dssp             CEETTCC-CCCCHHHHHHHHHHHHHH-TC--------CSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHT-
T ss_pred             cccccCC-CCCChHHHHHHHHHHHhc-CC--------cccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcC-
Confidence            4554432 344457899999888875 21        223 46788999999999999999999999999999999885 


Q ss_pred             CCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        163 RNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       163 ~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      +||.|++..+.|.++...+...|.+++.++.+      |++++++.+++           ++++|++.+   ++|...++
T Consensus        89 ~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~---~tG~~~~l  154 (424)
T 2po3_A           89 LTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTP-----------RTSAVVGVH---LWGRPCAA  154 (424)
T ss_dssp             CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCT-----------TEEEEEEEC---GGGCCCCH
T ss_pred             CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCc-----------CCcEEEEEC---CCCCcCCH
Confidence            78999999999999999999999998888754      67777766532           346666643   67889999


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhhCC
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLSGS  312 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~~~  312 (457)
                      ++|.++|++||+++|+||+|++|.. ..+..    .+.   ..|+++.||+  |+++ +.+|+++++ +++++.++....
T Consensus       155 ~~i~~la~~~~~~li~Dea~~~g~~-~~~~~----~~~---~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~  226 (424)
T 2po3_A          155 DQLRKVADEHGLRLYFDAAHALGCA-VDGRP----AGS---LGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHN  226 (424)
T ss_dssp             HHHHHHHHHTTCEEEEECTTCTTCE-ETTEE----TTS---SSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHB
T ss_pred             HHHHHHHHHcCCEEEEECccccCCe-ECCee----ccc---ccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHh
Confidence            9999999999999999999986543 22221    111   1268899998  8885 456899998 788777653211


Q ss_pred             -c----ce-----ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-C----CCeEE
Q psy15447        313 -G----YC-----FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-D----TPLKY  377 (457)
Q Consensus       313 -~----~~-----~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-~----~~~~~  377 (457)
                       +    +.     ....++++.+++++..++.++   +..++.+++.+++.+.|++   ++++.+...+ .    ..++.
T Consensus       227 ~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~---~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~  300 (424)
T 2po3_A          227 FGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFP---EVIDRNRRNHAAYREHLAD---LPGVLVADHDRHGLNNHQYVI  300 (424)
T ss_dssp             TTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHTCS---CTTEEECCGGGGSCCCCCCEE
T ss_pred             cCccccccccccCcCCCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc---CCCccccCCCCCCccccEEEE
Confidence             1    10     112356777777776665543   3677888889999999987   4578775422 1    14555


Q ss_pred             EEecC---CcchHHHHHHHHHHHHHHHHcCeeEeccccCcccc-CC--------C-------CCeEEEEecCCCCHHHHH
Q psy15447        378 LYLQK---SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA-KK--------Q-------KPSIRITCNISHTEQDMN  438 (457)
Q Consensus       378 i~~~~---~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-~~--------~-------~~~lRi~~~~~~t~edi~  438 (457)
                      +.++.   ..       ...++.+.|.++||.+++...+.... +.        .       ...+|++++..+|++|++
T Consensus       301 i~~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~  373 (424)
T 2po3_A          301 VEIDEATTGI-------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIR  373 (424)
T ss_dssp             EEECHHHHSS-------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHH
T ss_pred             EEECCccchh-------hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHH
Confidence            66542   11       24578889999999998732211000 00        0       112777777999999999


Q ss_pred             HHHHHHHHHHHHhc
Q psy15447        439 SLIETLCKSHDIAV  452 (457)
Q Consensus       439 ~~~~~l~~~~~~~~  452 (457)
                      +++++|+++++...
T Consensus       374 ~~~~~L~~~~~~~~  387 (424)
T 2po3_A          374 RVADLLRLCATRGR  387 (424)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhH
Confidence            99999999886653

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.95  E-value=5.5e-26  Score=224.50  Aligned_cols=309  Identities=16%  Similarity=0.166  Sum_probs=224.2

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN  174 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h  174 (457)
                      .+++.+++.+.+......        +..+...++++.+++++|.+.++++++|++|+..++.++ .++||.|++..+.|
T Consensus        35 ~~~~~~a~~~~~~~~~~~--------~~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~  106 (391)
T 3dr4_A           35 DGNERDYVLECMDTTWIS--------SVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTY  106 (391)
T ss_dssp             CSSHHHHHHHHHHHTCCS--------SCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSC
T ss_pred             CHHHHHHHHHHHHcCCcc--------CCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCch
Confidence            378889998888752110        245778999999999999999999999999999999999 89999999999999


Q ss_pred             HHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        175 FAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       175 ~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      .++...+...|.++..++.+      |++++++.+++           ++++|++   .|++|.+.|+++|+++|++||+
T Consensus       107 ~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~v~~---~n~tG~~~~~~~i~~l~~~~~~  172 (391)
T 3dr4_A          107 IASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITP-----------RTKAIMP---VHLYGQICDMDPILEVARRHNL  172 (391)
T ss_dssp             THHHHHHHHTTCEEEEECBCTTTCSBCGGGSGGGCCT-----------TEEEECC---BCGGGCCCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHCCCEEEEEecCccccCcCHHHHHHhcCC-----------CceEEEE---ECCCCChhhHHHHHHHHHHcCC
Confidence            99999999999999888755      67777766642           4456663   4688999999999999999999


Q ss_pred             EEEEEcCcccccccCCCCccccccCCCCCCccEEEecCc--cccc-CcccEEEec-HHHHHHHHhhC-Cc------c---
Q psy15447        249 RIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALG-SVGGFCVGS-SYIIEHHRLSG-SG------Y---  314 (457)
Q Consensus       249 ~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg-~~gG~v~~~-~~~~~~~~~~~-~~------~---  314 (457)
                      ++|+||+|+.|.... +.    ..+.-+   |+.+.||+  |+++ +.||+++.+ +.+.+.++... .+      +   
T Consensus       173 ~li~D~a~~~g~~~~-~~----~~~~~~---di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  244 (391)
T 3dr4_A          173 LVIEDAAEAVGATYR-GK----KSGSLG---DCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFP  244 (391)
T ss_dssp             EEEEECTTCTTCEET-TE----ETTSSS---SEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCS
T ss_pred             EEEEECcccccceEC-Ce----eecccC---CEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCCCccccc
Confidence            999999998765321 11    122112   57777766  9996 456777665 55665554221 11      0   


Q ss_pred             --eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-------CCCCeEEEEecC--C
Q psy15447        315 --CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-------RDTPLKYLYLQK--S  383 (457)
Q Consensus       315 --~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-------~~~~~~~i~~~~--~  383 (457)
                        .+...++++.+++++..++.++   +..++.+++.+++++.|++   . ++.+...       ....++++.+..  .
T Consensus       245 ~~g~~~~~~~l~aa~~~~~~~~~~---~~~~~~~~~~~~l~~~L~~---~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~~  317 (391)
T 3dr4_A          245 IVGFNYRMTNIQAAIGLAQLERVD---EHLAARERVVGWYEQKLAR---L-GNRVTKPHVALTGRHVFWMYTVRLGEGLS  317 (391)
T ss_dssp             SCCCBCBCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHGG---G-TTSEECCCCCTTSCCCCSSEEEEECSSCS
T ss_pred             ccccccCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhc---C-CccccCcCCCCCCcceeEEEEEEECCccc
Confidence              1123457777777766655443   4678888999999999988   3 5554433       123356777665  2


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccC---------------CCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK---------------KQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~---------------~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .       ...++.+.|.++||.++++..|....+               .....+|++++..+|++||++++++|++++
T Consensus       318 ~-------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          318 T-------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             S-------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred             h-------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            2       356799999999999987653321000               013579999999999999999999998653

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.95  E-value=3.4e-25  Score=220.34  Aligned_cols=285  Identities=15%  Similarity=0.140  Sum_probs=209.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++++++|.+.+++++||++|+..++.++.++||.|++..+.|.++...+    ...|.++..++. |+++
T Consensus        54 ~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~  132 (412)
T 2cb1_A           54 KDPTAKALEERLKALEGALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEA  132 (412)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHH
T ss_pred             CChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHH
Confidence            35778999999999999999999999999999999999999999999999998876654    346888888876 4888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++++++|++|.+.|+++|+++|++||+++|+||+|+.+.+.  ...    .+   .+
T Consensus       133 l~~~i~-----------~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~--~~~----~~---~~  192 (412)
T 2cb1_A          133 VREALS-----------AKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGAL--CRP----LA---WG  192 (412)
T ss_dssp             HHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTS--CCG----GG---GT
T ss_pred             HHHHhc-----------cCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccc--CCc----cc---cC
Confidence            887774           25678999999999999999999999999999999999999865111  111    11   23


Q ss_pred             ccEEEecCcccccCc----ccEEEecH---------------------------HHHHHHHhhCCcceecCCCcHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGSS---------------------------YIIEHHRLSGSGYCFSASLPPFLAVA  327 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~aa  327 (457)
                      +|+++.|++|+++++    ||+++.++                           ++.+.++.... ..++..++|..++.
T Consensus       193 ~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~-~~~g~~~~~~~a~~  271 (412)
T 2cb1_A          193 AHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGL-SLCGMALSPFNAYL  271 (412)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHT-TTTCCCCCHHHHHH
T ss_pred             CeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHH-HhcCCCCChHHhHH
Confidence            589999999999642    45555552                           34444443220 11233568888877


Q ss_pred             HHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-cc----------------CCCCeEEEEecCCcchHHHH
Q psy15447        328 ANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GH----------------RDTPLKYLYLQKSDDEVASK  390 (457)
Q Consensus       328 a~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~----------------~~~~~~~i~~~~~~~~~~~~  390 (457)
                      +...++.+.   +..++..++.+++.+.|.+   .+++... .+                ..+.++.+.+ .+       
T Consensus       272 ~~~~l~~l~---~~~~~~~~~~~~l~~~L~~---~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~~-------  337 (412)
T 2cb1_A          272 LFQGLETVA---LRVARMSETARFLAERLQG---HPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-GD-------  337 (412)
T ss_dssp             HHHHGGGHH---HHHHHHHHHHHHHHHHHHT---CTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-SS-------
T ss_pred             HHcCCchHH---HHHHHHHHHHHHHHHHHHc---CCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CC-------
Confidence            777765553   3566777899999999987   4565532 11                2466888888 43       


Q ss_pred             HHHHHHHHHHHHcCeeEeccc---------cCcccc------------CCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        391 KLLQTICDMCIQAGFAITCPS---------HLDQEA------------KKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       391 ~~~~~~~~~l~~~Gi~v~~~~---------~~~~~~------------~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                        ...+.+.|.+.||.+ ...         +|....            ...++.+|++++..+++++++.+.++|++
T Consensus       338 --~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          338 --LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             --HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             --HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence              234566666789988 552         342200            11157999999999999999999999864

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.95  E-value=8.8e-26  Score=224.65  Aligned_cols=287  Identities=15%  Similarity=0.149  Sum_probs=211.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH----HHHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT----GLIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~----~~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...+|++++++++|.+.+++++||++|+..++.+++++||.|++..+.|+++..    .+...|.++..++.+|+++
T Consensus        80 ~~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~  159 (430)
T 3ri6_A           80 SNPTVEDLEQRLKNLTGALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLA  159 (430)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHH
Confidence            467889999999999999999999999999999999999999999999999988777    5667899999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+++           ++++|++|+++||+|.+.|+++|+++|++||+++|+|++++.+.+-.   .  ..     .+
T Consensus       160 l~~ai~~-----------~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~~~---~--~~-----~g  218 (430)
T 3ri6_A          160 VEHACDE-----------TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYLLE---A--KR-----LG  218 (430)
T ss_dssp             HHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTTCC---G--GG-----GT
T ss_pred             HHHhhCC-----------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC---h--HH-----cC
Confidence            9988753           56899999999999999999999999999999999999998654311   1  11     23


Q ss_pred             ccEEEecCcccccC----cccEEE--ecHHH------------------HHHHHhhCCcceecCCCcHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCV--GSSYI------------------IEHHRLSGSGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~--~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      +|+++.|++|++|+    .||+++  ++..+                  ++..+.. ....++..++|..++.++..++.
T Consensus       219 ~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~-~~~~~g~~~~~~~a~l~l~~l~~  297 (430)
T 3ri6_A          219 VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKE-VFQNLGPSLSPHNAYLQSLGLET  297 (430)
T ss_dssp             CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHT-HHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHH-HHHhcCCCCCHHHHHHHHhhhhh
Confidence            58999999999975    568877  33222                  2222211 11234556788888887777776


Q ss_pred             HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC----------------CC-eEEEEecCCcchHHHHHHHHHHH
Q psy15447        335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD----------------TP-LKYLYLQKSDDEVASKKLLQTIC  397 (457)
Q Consensus       335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~----------------~~-~~~i~~~~~~~~~~~~~~~~~~~  397 (457)
                      +.   .++++..+++.++.+.|++   .+++..+..+.                +. ++++.+++..       .+.++.
T Consensus       298 l~---~r~~~~~~na~~la~~L~~---~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~-------~~~~~~  364 (430)
T 3ri6_A          298 MA---LRIERSCQNAQELAHWLLS---IPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE-------ASYRFM  364 (430)
T ss_dssp             HH---HHHHHHHHHHHHHHHHHTT---CTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH-------HHHHHH
T ss_pred             HH---HHHHHHHHHHHHHHHHHhC---CCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH-------HHHHHH
Confidence            64   3667888999999999988   45554322221                44 9999988432       566777


Q ss_pred             HHHHHcCeeEeccccCcc------------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        398 DMCIQAGFAITCPSHLDQ------------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       398 ~~l~~~Gi~v~~~~~~~~------------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      +.|.-.++.+..+...+.                  .....++.+|+++....    .+.+++.|++++
T Consensus       365 ~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~----~~dl~~dl~~al  429 (430)
T 3ri6_A          365 DALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEE----IEDLKEDILQAL  429 (430)
T ss_dssp             HHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSC----HHHHHHHHHHHH
T ss_pred             HhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHhh
Confidence            777655555544332211                  01234678999997544    455555555443

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.95  E-value=2.9e-26  Score=229.53  Aligned_cols=340  Identities=11%  Similarity=0.084  Sum_probs=226.7

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCC--cccChHHHHHHHHHHHhhcCCC--cEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRG--FYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~  153 (457)
                      +|..|+|++++.    ..+|++.+++.+++.... ++..+..  ..+..+...++++++++++|.+  .++++++|++|+
T Consensus        17 ~~~~~Ld~~~~~----~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~   91 (432)
T 3a9z_A           17 NRKVYMDYNATT----PLEPEVIQAVTEAMKEAW-GNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESN   91 (432)
T ss_dssp             -CCEECBTTTCC----CCCHHHHHHHHHHHHHCC-SCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHH
T ss_pred             CCcEEeeCCccC----CCCHHHHHHHHHHHHHhc-CCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHH
Confidence            466777776653    347999999999997632 1111111  1123456789999999999964  567777789999


Q ss_pred             HHHHHhhc--------CCCC-------------EEEEeCcccHHHHHHHH----hcCCeEEEecCC------CHHHHHHH
Q psy15447        154 ASAIAAYV--------KRND-------------AVFVDENINFAIQTGLI----ASRCKVQYFKHN------NMQHLEEL  202 (457)
Q Consensus       154 ~~ai~a~~--------~~gd-------------~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~------d~~~le~~  202 (457)
                      ..++.+++        ++||             .|+++...|.+...++.    ..|.++..++.+      |++++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~  171 (432)
T 3a9z_A           92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAA  171 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHT
T ss_pred             HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHh
Confidence            99998875        4774             66667777887765543    357888877652      67777776


Q ss_pred             HHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC----------cEEEEEcCcccccccCCCCcccccc
Q psy15447        203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ----------ARIFVDESVSFGTLGSTGHGVTEYF  272 (457)
Q Consensus       203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g----------~~li~DEa~~~g~~g~~g~~~~~~~  272 (457)
                      ++           +++++|++++++|++|.+.|+++|.++|++||          +++|+||+|++|...   ...   .
T Consensus       172 i~-----------~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~---~~~---~  234 (432)
T 3a9z_A          172 VR-----------PTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR---VDV---E  234 (432)
T ss_dssp             CC-----------TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC---CCH---H
T ss_pred             cc-----------CCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcc---cCh---h
Confidence            64           24678999999999999999999999999999          999999999865321   111   1


Q ss_pred             CCCCCCccEEEecCcccccCcccEEEecHHH-HHHHHhhCC-----cceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHH
Q psy15447        273 GVSTEEVDMIIGSLEHALGSVGGFCVGSSYI-IEHHRLSGS-----GYCFSASLPPFLAVAANKALHLLKAN-PSLLTKL  345 (457)
Q Consensus       273 ~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l  345 (457)
                      .   .++|+++.|+||++|...|+++++++. ...++....     .....++.++..++++.++++.+++. ++..+++
T Consensus       235 ~---~~~d~~~~s~~K~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~  311 (432)
T 3a9z_A          235 D---LGVDFLTIVGHKFYGPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHM  311 (432)
T ss_dssp             H---HCCSEEEEEGGGTTCCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             h---cCCCEEEEehhHhcCCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence            1   134788999999998778999988764 222211100     00112345777777777788765432 4577888


Q ss_pred             HHHHHHHHHHhhcccccCC--eEEecc-----CCCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccc-
Q psy15447        346 REKCNTMHSLLSQHKVTQR--FLVQGH-----RDTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE-  416 (457)
Q Consensus       346 ~~~~~~l~~~L~~~~~~~~--~~~~~~-----~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-  416 (457)
                      +++++++.+.|++   ++|  +.+..+     ..+.++.+.+.+ ..       ...++.+.+  +|+.+..+..+... 
T Consensus       312 ~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l--~~i~~~~G~~~~~~~  379 (432)
T 3a9z_A          312 RDIRDYLEERLEA---EFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-------RGYMVLAQC--QTLLASVGASCHSDH  379 (432)
T ss_dssp             HHHHHHHHHHHHH---HHGGGEEESSCCTTCCBCTTEEEEEECSTTC-------CHHHHHHHC--SSEECBSSCGGGGGG
T ss_pred             HHHHHHHHHHHHh---ccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-------cHHHHHHHh--cCeEEeccccccCCC
Confidence            8999999999987   233  332222     123366666654 21       123444444  36666544322110 


Q ss_pred             ----------cCC----CCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        417 ----------AKK----QKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       417 ----------~~~----~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                                ...    ..+++|++++..+|++|+++++++|++++++++++
T Consensus       380 ~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~~  431 (432)
T 3a9z_A          380 EDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGP  431 (432)
T ss_dssp             TTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence                      000    13789999999889999999999999999887654

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.95  E-value=1.7e-26  Score=228.56  Aligned_cols=330  Identities=10%  Similarity=0.026  Sum_probs=218.6

Q ss_pred             eeeEEeecCCccCCC----CChhhHHHHHH-HHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CC--cEEEecc
Q psy15447         80 IPCINFATHNYLSFV----ENPDIEKCAID-CIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LE--ETALYSF  148 (457)
Q Consensus        80 ~~~id~~s~~~l~~~----~~p~i~~a~~~-~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~--~~i~~~s  148 (457)
                      ..++||+.+.|++..    .+|++.+++.+ +++..+..  ++....|..+.++++++.+.+..+    .+  .++++++
T Consensus        26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~--~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g  103 (397)
T 3fsl_A           26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGAS--LYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG  103 (397)
T ss_dssp             SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCC--CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred             CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccc--cCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence            468999988554332    23789999988 77653321  122233455555555555544333    34  5677788


Q ss_pred             cHHHHHHHH--HhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC----C---CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        149 GFSTSASAI--AAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH----N---NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       149 G~~a~~~ai--~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----~---d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      |++|+..++  .+++++||.|+++.++|..+...++..|.++..++.    +   |++++++.+++..        ++++
T Consensus       104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~  175 (397)
T 3fsl_A          104 GSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ--------AGSI  175 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC--------TTCE
T ss_pred             cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC--------CCCE
Confidence            889999885  455789999999999999999999999999998876    4   8999999997532        3568


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC--CccccccCCCCCCccEEEecCcccccCcc
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG--HGVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g--~~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      ++++++++||+|.+.+   +++|+++|++||+++|+||+|+.+.++..+  ..+....+.  .+.+++++|+||++|.+|
T Consensus       176 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G  253 (397)
T 3fsl_A          176 VLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA--GLPALVSNSFSKIFSLYG  253 (397)
T ss_dssp             EEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHT--TCCEEEEEECTTTTTCGG
T ss_pred             EEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhc--CCCEEEEecccccccCcC
Confidence            8999999999999977   559999999999999999999876554111  111111112  233688999999998666


Q ss_pred             ---cEEEe---cHHHHHHHHhhCCc---ceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhhc
Q psy15447        295 ---GFCVG---SSYIIEHHRLSGSG---YCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       295 ---G~v~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~~  358 (457)
                         ||+++   +++.++.+......   ..++ +.+++..+++.+.++.       .+..++++++++++.+++.+.|++
T Consensus       254 ~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~  332 (397)
T 3fsl_A          254 ERVGGLSVMCEDAEAAGRVLGQLKATVRRNYS-SPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLST  332 (397)
T ss_dssp             GCCEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEEecCCHHHHHHHHHHHHHHHHhccC-CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               88763   45555543221110   1111 2244444444433321       122245778889999999999987


Q ss_pred             ccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        359 HKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       359 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      +....++.+..+..+.+.++.+.           ...+.+.|.++||++.++           +  ||+++ .+|+++|+
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~gi~v~~g-----------~--Ris~~-~~~~~~i~  387 (397)
T 3fsl_A          333 EMPERNFDYLLNQRGMFSYTGLS-----------AAQVDRLREEFGVYLIAS-----------G--RMCVA-GLNTANVQ  387 (397)
T ss_dssp             HCTTSCCTHHHHCCSSEEECCCC-----------HHHHHHHHHTTCEECCTT-----------C--EEEGG-GCCTTTHH
T ss_pred             cCCCCCceeecCCceEEEecCCC-----------HHHHHHHHHhCCEEECCC-----------C--eEEEE-ecCHhhHH
Confidence            32101555544445555554432           123566677789998753           1  88885 35778899


Q ss_pred             HHHHHHHHH
Q psy15447        439 SLIETLCKS  447 (457)
Q Consensus       439 ~~~~~l~~~  447 (457)
                      +++++|+++
T Consensus       388 ~~~~~l~~~  396 (397)
T 3fsl_A          388 RVAKAFAAV  396 (397)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999999875

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.95  E-value=2.4e-26  Score=224.29  Aligned_cols=313  Identities=11%  Similarity=0.136  Sum_probs=215.1

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCE--EEEeCcc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDA--VFVDENI  173 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~--v~~~~~~  173 (457)
                      +|++.+|+.+.+.         ...|+..+...+|++++++++|.+..+++++|++|+..++++++.+||.  |+++..+
T Consensus        28 ~p~v~~ai~~~~~---------~~~~~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~   98 (359)
T 3pj0_A           28 LTEALQNIDDNLE---------SDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLS   98 (359)
T ss_dssp             HHHHTTTSCTTCB---------CCBTTBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTC
T ss_pred             CHHHHHHHHhhcc---------cCcccCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccc
Confidence            4666666555221         1234556788999999999999998888999999999999999888775  7777777


Q ss_pred             cHHHHH--HH-HhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC-CCCCChH---HHHHH
Q psy15447        174 NFAIQT--GL-IASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS-ADICPLK---DILSL  242 (457)
Q Consensus       174 h~~~~~--~~-~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~-G~i~~l~---~i~~l  242 (457)
                      |.....  .. ...|.++..++.+    |++++++.  .          +++++|++++++|++ |.+.|.+   +|+++
T Consensus        99 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~--~----------~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~  166 (359)
T 3pj0_A           99 HLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSL--R----------EPVSSVLIELPQREIGGQLPAFEELEKISEY  166 (359)
T ss_dssp             HHHHSSTTHHHHHHCCEEEECSCTTSCCCHHHHHTC--S----------SCCSEEEEESSBGGGTSBCCCHHHHHHHHHH
T ss_pred             eeeehhcchHHHhcCceEEecCCcCCCcCHHHHHhc--c----------CCceEEEEEecccCCCcccCCHHHHHHHHHH
Confidence            765432  22 4568888887754    67777765  1          356788999998886 7888855   55999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cccEEEecHHHHHHHHhhCCcceecCCCc
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGFCVGSSYIIEHHRLSGSGYCFSASLP  321 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~~~~~~~~~~~~~~~  321 (457)
                      |++||++||+||+|.++.....+...... .   ...|+++.|+||++++ .||++++++++++.++.....+..+....
T Consensus       167 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~---~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~~~~~~~~~~~~~  242 (359)
T 3pj0_A          167 CHEQGISLHLDGARLWEITPFYQKSAEEI-C---ALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKIWKRRYGGDLISL  242 (359)
T ss_dssp             HHHHTCEEEEEETTCGGGHHHHTCCHHHH-H---TTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHHHHTTCCCSCC
T ss_pred             HHHcCCEEEEECcchhcchhhhCCCHHHh-h---ccCCEEEEeccccCCCcceEEEECCHHHHHHHHHHHHHhCCCcchh
Confidence            99999999999998765432111111111 1   2347888899999964 45788899999888764221111111123


Q ss_pred             HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEe-ccCCCCeEEEEecCCcchHHHHHHHHHHHHHH
Q psy15447        322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GHRDTPLKYLYLQKSDDEVASKKLLQTICDMC  400 (457)
Q Consensus       322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  400 (457)
                      ...++++..+++...   +..++..++.+++.+.|++   ++|+.+. .++.++++++.+....     .....++.+.|
T Consensus       243 ~~~~~a~~~~l~~~~---~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l  311 (359)
T 3pj0_A          243 YPYILSADYYFEKRI---GKMAEYFEAAKGLAERFNS---CSGVKTVPEVPVSNMFHVYFENSA-----DEIGAILTKIQ  311 (359)
T ss_dssp             HHHHHHHHHHHHHHG---GGHHHHHHHHHHHHHHHHT---STTEEEESSSCSSSEEEEEESSCH-----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHhh---CCCceeeccCCcceEEEEEecCcc-----chhHHHHHHHH
Confidence            333344445554432   3456678889999999988   5688874 3567788888876542     11356788999


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecC---CCCHHHHHHHHHHHHHH
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNI---SHTEQDMNSLIETLCKS  447 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~---~~t~edi~~~~~~l~~~  447 (457)
                      .++||.++++..+..   .+..++|+++..   ..+.++++++++.|.++
T Consensus       312 ~~~GV~v~~g~~~~~---~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          312 DETGVGISGYLQEKS---ADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             HHHCEECCSCCEEEE---TTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             HhcCcEecCCccccC---CCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence            999999988754321   234689998753   35788888888888764

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.95  E-value=1.2e-25  Score=222.03  Aligned_cols=288  Identities=13%  Similarity=0.134  Sum_probs=211.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      ..+...++++++|+++|.+..++++||++|+..+++ ++++||.|++..+.|.+....    ++..|.++..++.+| ++
T Consensus        53 ~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~  130 (393)
T 1n8p_A           53 QNPNRENLERAVAALENAQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-ND  130 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HH
T ss_pred             CChhHHHHHHHHHHHhCCCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HH
Confidence            346688999999999999889999999999999999 889999999999998866553    345688888888877 77


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc----CcEEEEEcCcccccccCCCCccccccCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY----QARIFVDESVSFGTLGSTGHGVTEYFGV  274 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~----g~~li~DEa~~~g~~g~~g~~~~~~~~~  274 (457)
                      +++.++           +++++|++++++|++|.+.|+++|.++|++|    |+++|+||+|+.+.+..    ... +  
T Consensus       131 l~~~i~-----------~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~~----~~~-~--  192 (393)
T 1n8p_A          131 LPQLIK-----------ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISN----PLN-F--  192 (393)
T ss_dssp             HHHHSC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCC----GGG-G--
T ss_pred             HHHhcc-----------cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccCC----HHH-c--
Confidence            777664           3568999999999999999999999999999    99999999998765431    111 2  


Q ss_pred             CCCCccEEEecCcccccCcc----cEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447        275 STEEVDMIIGSLEHALGSVG----GFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC  349 (457)
Q Consensus       275 ~~~~~Di~~~s~sK~lg~~g----G~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~  349 (457)
                         ++|+++.|++|.+|+.|    |+++++ +++++.++....  .++.++++..++++.++++.+   +..+++..++.
T Consensus       193 ---~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~  264 (393)
T 1n8p_A          193 ---GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQN--AIGAIPSPFDAWLTHRGLKTL---HLRVRQAALSA  264 (393)
T ss_dssp             ---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTH---HHHHHHHHHHH
T ss_pred             ---CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHhccchH---HHHHHHHHHHH
Confidence               35899999999998654    999884 788887764321  234455777777766666543   23567777888


Q ss_pred             HHHHHHhhcccccCC-eEEe-cc----------------C-C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447        350 NTMHSLLSQHKVTQR-FLVQ-GH----------------R-D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC  409 (457)
Q Consensus       350 ~~l~~~L~~~~~~~~-~~~~-~~----------------~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~  409 (457)
                      ..+.+.|++.   +. +.-. .+                . . +.++++.++...      .....+.+.|...++.++.
T Consensus       265 ~~l~~~L~~~---~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------~~~~~~l~~l~~~~~~~s~  335 (393)
T 1n8p_A          265 NKIAEFLAAD---KENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA------EAASKFASSTRLFTLAESL  335 (393)
T ss_dssp             HHHHHHHTSC---TTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH------HHHHHHHHHCSSSEECSCC
T ss_pred             HHHHHHHHhC---CCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH------HHHHHHHhhCCcceECCCC
Confidence            8888888773   22 2211 01                1 3 678888887531      1445666666544555443


Q ss_pred             ccc------Ccc--c----------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        410 PSH------LDQ--E----------AKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       410 ~~~------~~~--~----------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +..      |..  .          .....+.+|++++...++++++.+.++|+++
T Consensus       336 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          336 GGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             CCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             CCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence            321      111  0          0112578999999999999999999999865

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.95  E-value=9.2e-26  Score=220.98  Aligned_cols=303  Identities=15%  Similarity=0.092  Sum_probs=220.6

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      |++.+++.+++...         .++..+...++++++++++|.+.+++++||++|+..++.++ .++||.|+++.++|.
T Consensus        16 ~~v~~a~~~~~~~~---------~~~~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~   86 (367)
T 3nyt_A           16 DKIDAGIQRVLRHG---------QYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYV   86 (367)
T ss_dssp             HHHHHHHHHHHHHC---------CCSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCT
T ss_pred             HHHHHHHHHHHhcC---------CccCChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccH
Confidence            55666666666542         12245678899999999999999999999999999999999 899999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++...+...|.++..++.+      |++++++.+.           +++++|+   +.+++|...++++|+++|++||++
T Consensus        87 ~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~-----------~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~  152 (367)
T 3nyt_A           87 ATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAIT-----------PRTKAII---PVSLYGQCADFDAINAIASKYGIP  152 (367)
T ss_dssp             HHHHHHHHTTCEEEEECBCTTTCSBCGGGTGGGCC-----------TTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCEEEEEecCCccCCcCHHHHHHhcC-----------cCCcEEE---eeCCccChhhHHHHHHHHHHcCCE
Confidence            9999999999998887643      7788877663           2456666   445789999999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC--cccEEEe-cHHHHHHHHhhCC-cc---------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS--VGGFCVG-SSYIIEHHRLSGS-GY---------  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~--~gG~v~~-~~~~~~~~~~~~~-~~---------  314 (457)
                      +|+||+|++|... .+.    ..+.-  . |+++.||  +|.+|+  .||++++ ++++.+.++.... +.         
T Consensus       153 li~D~a~~~g~~~-~~~----~~~~~--~-di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~  224 (367)
T 3nyt_A          153 VIEDAAQSFGASY-KGK----RSCNL--S-TVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRV  224 (367)
T ss_dssp             BEEECTTTTTCEE-TTE----ETTSS--S-SEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSC
T ss_pred             EEEECccccCCeE-CCe----eccCC--C-CEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeecc
Confidence            9999999876542 122    12211  1 7888897  899976  3688777 4677776654321 11         


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCCcchHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~  389 (457)
                      .++..++++.++++++.++.++   +..++.+++.+++.+.|++    .++.+....     ....+.+.+.        
T Consensus       225 g~~~~~~~~~aa~~~~~l~~~~---~~~~~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~--------  289 (367)
T 3nyt_A          225 GVNSRLDTLQAAILLPKLEIFE---EEIALRQKVAAEYDLSLKQ----VGIGTPFIEVNNISVYAQYTVRMD--------  289 (367)
T ss_dssp             CCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHH----TTCCCCCCCTTEECCCSSEEEECS--------
T ss_pred             CcCCCccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----CCeeccCCCCCCceeeEEEEEEeC--------
Confidence            1344578999888888877664   3667788889999999988    343332111     1233444443        


Q ss_pred             HHHHHHHHHHHHHcCeeEecccc-Ccccc--CC------------CCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSH-LDQEA--KK------------QKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~--~~------------~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                        ...++.+.|.++||.++.... |....  ..            ....+|+++...+|++|+++++++|++.
T Consensus       290 --~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          290 --NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             --SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             --CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence              234788999999999876532 21100  00            1347999999999999999999999765

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.95  E-value=1.4e-25  Score=228.59  Aligned_cols=348  Identities=11%  Similarity=0.079  Sum_probs=224.5

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHH----HHHHHHhhcCC---CcEEEecccHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLD----LENDIASFMGL---EETALYSFGFSTSA  154 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~---~~~i~~~sG~~a~~  154 (457)
                      .+++.+..|+++...+....++.+.+..+....  +...++..+...+    +.+++++++|.   +..+++++|++|+.
T Consensus        95 ~~~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~--~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~  172 (497)
T 2qma_A           95 AIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQ--SMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQ  172 (497)
T ss_dssp             SCCTTSTTBCSSSCCCCBHHHHHHHHHHHHHCC--CTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHH
T ss_pred             CCCCCCCCeeEeCCCCCcHHHHHHHHHHHhhcc--cccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHH
Confidence            345666677777755444444444433322221  1222333334444    45559999986   45788889999999


Q ss_pred             HHHHhh----c---------CC------CC-EEEEeCcccHHHHHHHHhcCC---eEEEecCC-----CHHHHHHHHHhh
Q psy15447        155 SAIAAY----V---------KR------ND-AVFVDENINFAIQTGLIASRC---KVQYFKHN-----NMQHLEELLRQQ  206 (457)
Q Consensus       155 ~ai~a~----~---------~~------gd-~v~~~~~~h~~~~~~~~~~g~---~~~~~~~~-----d~~~le~~l~~~  206 (457)
                      .++.++    .         ++      ++ .|+++...|.++..++...|.   +++.++.+     |+++|++.+++.
T Consensus       173 ~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~  252 (497)
T 2qma_A          173 MGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANADGTMDITKLDEVIAQA  252 (497)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHH
Confidence            988773    2         12      46 789999999999999888875   68888765     899999999764


Q ss_pred             chhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC
Q psy15447        207 DERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL  286 (457)
Q Consensus       207 ~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~  286 (457)
                      ...     ...+.+|+++.+++++|.+.|+++|+++|++||+++++|++|+.+.+....+.  ...++  .++|+++.|+
T Consensus       253 ~~~-----~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~--~~~gi--~~~D~i~~s~  323 (497)
T 2qma_A          253 KAE-----GLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKS--RLKGV--ERAHSISVDF  323 (497)
T ss_dssp             HHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGG--GGTTG--GGCSEEEEET
T ss_pred             HHC-----CCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchH--hhcCc--ccCCEEEEcc
Confidence            210     01234777888888999999999999999999999999999987665322111  12233  3568999999


Q ss_pred             cccccCc--ccEEEec-HHHHHHHHhhCCcceecCC---CcHHHH----------HHHHHHHHHHhh--CcHHHHHHHHH
Q psy15447        287 EHALGSV--GGFCVGS-SYIIEHHRLSGSGYCFSAS---LPPFLA----------VAANKALHLLKA--NPSLLTKLREK  348 (457)
Q Consensus       287 sK~lg~~--gG~v~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~----------aaa~a~l~~~~~--~~~~~~~l~~~  348 (457)
                      ||+++.+  .|+++.+ +..++.+.. ...|.++..   .++..+          .+..++++.+..  ..++.++..++
T Consensus       324 hK~l~~p~~~G~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~  402 (497)
T 2qma_A          324 HKLFYQTISCGALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQ  402 (497)
T ss_dssp             TTTTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             hhccCCCcceEEEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            9998643  3666554 443433321 112222111   111111          111233444322  13567888899


Q ss_pred             HHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        349 CNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       349 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      ++++.+.|++   .+++++..++..+++++.+......  ......++.+.|.++|+.+.+...     ..+.+++|+++
T Consensus       403 a~~l~~~L~~---~~~~~~~~~~~~~~v~f~~~~~~~~--~~~l~~~l~~~l~~~G~~~~~~~~-----~~g~~~lRis~  472 (497)
T 2qma_A          403 TLEVADMIRT---NDQFELLAEPSLSTVLFRATHETAD--LDELNKALRLEALTRGIAVLGETI-----VDGKTALKFTI  472 (497)
T ss_dssp             HHHHHHHHHT---CTTEEECSCCSSSEEEEEECCSSSC--HHHHHHHHHHHHHHHTSCBCEEEE-----ETTEEEEEEEC
T ss_pred             HHHHHHHHhh---CCCeEEEcCCCceEEEEEEcCCccC--HHHHHHHHHHHHHhCCCEEEEeeE-----ECCEEEEEEEe
Confidence            9999999988   5688886566778888887643110  011345678889999988754321     22346899998


Q ss_pred             -cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        429 -NISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       429 -~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       +..+|++|+++++++|+++++++
T Consensus       473 ~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          473 LNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhh
Confidence             88899999999999999988754

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.94  E-value=1.3e-24  Score=214.90  Aligned_cols=321  Identities=12%  Similarity=0.138  Sum_probs=226.5

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCccc
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENIN  174 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h  174 (457)
                      .|++.+++.+.+.. +..+  +     ..+...++++++++++|.+.++++++|++|+..++.++ .++||.|+++.+.|
T Consensus        11 ~~~v~~a~~~~~~~-~~~~--~-----~g~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~   82 (394)
T 1o69_A           11 GGNELKYIEEVFKS-NYIA--P-----LGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTF   82 (394)
T ss_dssp             -CCHHHHHHHHHHH-TTTS--C-----TTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSC
T ss_pred             CHHHHHHHHHHHHc-CCcc--C-----CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCcc
Confidence            47889999988875 2111  0     13567899999999999999999999999999999999 89999999999999


Q ss_pred             HHHHHHHHhcCCeEEEecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        175 FAIQTGLIASRCKVQYFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       175 ~~~~~~~~~~g~~~~~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      .++...+...|.++..++.     .|++++++.+++..        +++++|++++   ++|...++++|.++|++||++
T Consensus        83 ~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~--------~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~  151 (394)
T 1o69_A           83 IASVAPICYLKAKPVFIDCDETYNIDVDLLKLAIKECE--------KKPKALILTH---LYGNAAKMDEIVEICKENDIV  151 (394)
T ss_dssp             GGGTHHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS--------SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHcCCEEEEEEeCCCCCcCHHHHHHHHhccc--------CCceEEEEEC---CCCChhhHHHHHHHHHHcCCE
Confidence            9998888999999888874     37899999886521        1356777775   678899999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEec-HHHHHHHHhhCCcce-----e------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGS-SYIIEHHRLSGSGYC-----F------  316 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~-~~~~~~~~~~~~~~~-----~------  316 (457)
                      +|+||+|++|... .+..... +    .++|+...|.+|.++ ..+|+++++ +++++.++.......     +      
T Consensus       152 li~Dea~~~g~~~-~~~~~~~-~----~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g  225 (394)
T 1o69_A          152 LIEDAAEALGSFY-KNKALGT-F----GEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYG  225 (394)
T ss_dssp             EEEECTTCTTCEE-TTEETTS-S----SSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCC
T ss_pred             EEEECcCccccee-CCccccc-c----cCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccccC
Confidence            9999999865431 1221111 1    235666556689886 456899985 788887764321110     1      


Q ss_pred             -cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----CCCeEEEEecCCcc-----
Q psy15447        317 -SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----DTPLKYLYLQKSDD-----  385 (457)
Q Consensus       317 -~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~-----  385 (457)
                       ...++++.++.+++.++.++   +..++++++.+++.+.|++    . +.+....     ..+++++.++....     
T Consensus       226 ~~~~~~~~~aa~~l~~l~~l~---~~~~~~~~~~~~l~~~L~~----~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  297 (394)
T 1o69_A          226 YNYRLSNVLGAIGVAQMEVLE---QRVLKKREIYEWYKEFLGE----Y-FSFLDELENSRSNRWLSTALINFDKNELNAC  297 (394)
T ss_dssp             CBCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHTT----T-EECCCCCTTEECCCSSEEEEESCCGGGSCCC
T ss_pred             cccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcc----c-ccccCCCCCCcceeEEEEEEecchhhccccc
Confidence             11147777777766665554   3678899999999999988    3 5544321     12256677653200     


Q ss_pred             ---------hHHHHHHHHHHHHHHHHcCeeEeccccCccccCC--C-------------CCeEEEEecCCCCHHHHHHHH
Q psy15447        386 ---------EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKK--Q-------------KPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       386 ---------~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~--~-------------~~~lRi~~~~~~t~edi~~~~  441 (457)
                               .........++.+.|.++||.++++..|....+.  .             ...+++..+..+|++|+++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~  377 (394)
T 1o69_A          298 QKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEIS  377 (394)
T ss_dssp             CEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred             cccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHH
Confidence                     0000013567899999999999887543210010  0             035666678889999999999


Q ss_pred             HHHHHHHH
Q psy15447        442 ETLCKSHD  449 (457)
Q Consensus       442 ~~l~~~~~  449 (457)
                      ++|+++++
T Consensus       378 ~~l~~~~~  385 (394)
T 1o69_A          378 KLILKSIK  385 (394)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHh
Confidence            99998754

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.94  E-value=9.1e-26  Score=221.50  Aligned_cols=328  Identities=14%  Similarity=0.116  Sum_probs=213.6

Q ss_pred             Ce-eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHH
Q psy15447         79 GI-PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~-~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~  154 (457)
                      |+ +++|++.... ....++++.+++.    .++          +......++++.+++++|.   +.++++++|++|+.
T Consensus        26 g~~~v~~~~~~~~-~~~~~~~v~~a~~----~~~----------~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~   90 (374)
T 2aeu_A           26 GRDALYDLSGLSG-GFLIDEKDKALLN----TYI----------GSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAIL   90 (374)
T ss_dssp             CGGGCEECSSCCC-CCCCCHHHHHHHT----STT----------HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             CccceeeecccCC-CCCCCHHHHHHHH----Hhc----------CchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHH
Confidence            55 6778776432 1122456666553    221          1234456788888888898   77889999999999


Q ss_pred             HHHHhhcCCCCEEEEeCcc---cHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEE-EEEecCCCCC
Q psy15447        155 SAIAAYVKRNDAVFVDENI---NFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF-IIVEGVYMNS  230 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~---h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~-vi~e~v~~~~  230 (457)
                      .++.++  +||.|++..+.   |......+...|.++..+  .|++++++. .           +++++ |++++++|++
T Consensus        91 ~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--~d~~~l~~~-~-----------~~~~~~v~~~~p~npt  154 (374)
T 2aeu_A           91 ATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES--DKVGEILNK-I-----------DKDTLVIITGSTMDLK  154 (374)
T ss_dssp             HHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--SCHHHHHTT-C-----------CTTEEEEEECBCTTSC
T ss_pred             HHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe--CCHHHHHhc-C-----------CCccEEEEEccCCCCC
Confidence            999988  99999998884   344444677789888888  688888765 2           24577 8899999999


Q ss_pred             C-CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHH
Q psy15447        231 A-DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHR  308 (457)
Q Consensus       231 G-~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~  308 (457)
                      | ...++++|.++|++||+++|+||+|+.+..+.........+     ++|++++|+||+++ ..+|++++++++++.++
T Consensus       155 G~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~  229 (374)
T 2aeu_A          155 VIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL-----GADLVVTSTDKLMEGPRGGLLAGKKELVDKIY  229 (374)
T ss_dssp             BCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH-----TCSEEEEETTSSSSSCSCEEEEEEHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc-----CCcEEEecCcccccCcceEEEEECHHHHHHHH
Confidence            9 78889999999999999999999987653211111001111     23899999999995 56799999999998876


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH--------HHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC--------NTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~--------~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ...  ..++.+.+++.++++.++++.+..  +.+++..++.        +.+.+.|.......|+.+...+.+.+++. .
T Consensus       230 ~~~--~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~-~  304 (374)
T 2aeu_A          230 IEG--TKFGLEAQPPLLAGIYRALKNFNL--ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKR-V  304 (374)
T ss_dssp             HHH--HTTTCBCCHHHHHHHHHHHHHCCH--HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEE-E
T ss_pred             Hhh--ccccCCCCHHHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEe-e
Confidence            543  223345688888888888876522  2334444444        34444444411013555533334433332 2


Q ss_pred             cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecC-CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      .... . .......+++..++ ++||.+.++..+    +...+++||+++. ..+++++++++++++++++++..
T Consensus       305 ~~~~-~-~~~~~~~~~~~~ll~~~gV~v~~g~~~----~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~  373 (374)
T 2aeu_A          305 YKDD-T-INIKKLIEIGFNLLKNYGIITITVAGM----PGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK  373 (374)
T ss_dssp             ESSH-H-HHHHHHHHHHHHHHHHHCEECSTTSSS----CSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred             cccc-c-ccccchHHHHHHHHHhCCEEEecCCCC----CCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence            2111 0 00001223555544 679999876421    2235689999864 33444699999999999987754

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.94  E-value=7.5e-26  Score=229.38  Aligned_cols=332  Identities=13%  Similarity=0.104  Sum_probs=224.3

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHh-cCCCCCCCCCcccChHHH----HHHHHHHHhhcCCCc-----EEEecccH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDK-NGVGSCGPRGFYGTNVVH----LDLENDIASFMGLEE-----TALYSFGF  150 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~-~~~~~~~~~~~~g~~~~~----~~l~~~la~~~g~~~-----~i~~~sG~  150 (457)
                      ..|++..+.  ++ .+|++.+|+.+.+.. |..++.+.+. |+..+..    ..+++++++++|.+.     .+++++|+
T Consensus        45 ~~i~L~a~e--~~-~~~~V~eA~~~~l~~~~~~g~p~~~~-y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs  120 (483)
T 1rv3_A           45 VGLELIASE--NF-ASRAVLEALGSCLNNKYSLGYPGQRY-YGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS  120 (483)
T ss_dssp             SSEECCTTC--CC-CCHHHHHHHTSGGGTCCCCEETTEES-SSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred             cCeEEEcCC--CC-CCHHHHHHHHHHHhccCcccCCCccc-cCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH
Confidence            356664432  12 368999999888865 3223322222 2233333    445588999999763     38889999


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHH--------HHHhcC--CeEEEec------CCCHHHHHHHHHhhchhcccCC
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQT--------GLIASR--CKVQYFK------HNNMQHLEELLRQQDERDTLNS  214 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--------~~~~~g--~~~~~~~------~~d~~~le~~l~~~~~~~~~~~  214 (457)
                      +++..++.+++++||.|++..+.|++...        ++...|  ...+.++      ..|++++++.+.+.        
T Consensus       121 ~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~--------  192 (483)
T 1rv3_A          121 PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLF--------  192 (483)
T ss_dssp             HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHH--------
T ss_pred             HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhc--------
Confidence            99999899999999999999988876542        223333  3445542      24899999999742        


Q ss_pred             CCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCc
Q psy15447        215 KVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSV  293 (457)
Q Consensus       215 ~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~  293 (457)
                        ++++|++ ++.|++ .+.|+++|+++|++||++||+|++|+.|.... +.  .. ..+  ..+|+++.|+||+| |+.
T Consensus       193 --~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~-~~--~~-~p~--~~~div~~s~~K~l~Gpr  262 (483)
T 1rv3_A          193 --HPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA-GV--VP-SPF--EHCHVVTTTTHKTLRGCR  262 (483)
T ss_dssp             --CCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH-TS--SC-CGG--GTCSEEEEESSGGGCCCS
T ss_pred             --CCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc-CC--CC-CCC--CCCcEEEecCcccCCCCC
Confidence              3457777 777776 88999999999999999999999998765421 11  00 001  14589999999999 677


Q ss_pred             ccEEEecHH---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHh
Q psy15447        294 GGFCVGSSY---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       294 gG~v~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L  356 (457)
                      ||+++++++               +.+.+.....+.. .++.+....++..++++.+..  .+++.++++++++++.+.|
T Consensus       263 gG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~-~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L  341 (483)
T 1rv3_A          263 AGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGL-QGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAAL  341 (483)
T ss_dssp             CEEEEEECSBCC-------CCBCCHHHHHHHHHTTTT-CCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcc-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHH
Confidence            899988864               3333332211111 233444444555566665532  2457888999999999999


Q ss_pred             hcccccCCeEEeccC-CCCeEEEEecC-CcchHHHHHHHHHHHHHHHHcCeeEe----ccccCccccCCCCCeEEEEecC
Q psy15447        357 SQHKVTQRFLVQGHR-DTPLKYLYLQK-SDDEVASKKLLQTICDMCIQAGFAIT----CPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~-~~~~~~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~----~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      ++    .|+.+..+. .++++++.+.. ..       ...++.+.|.++||.+.    ++..+    +...+.+||+++.
T Consensus       342 ~~----~g~~~~~~~~~~~~~~v~~~~~g~-------~~~~~~~~L~~~gI~v~~~~~pg~~~----~~~~~~iRis~~~  406 (483)
T 1rv3_A          342 VE----LGYKIVTGGSDNHLILVDLRSKGT-------DGGRAEKVLEACSIACNKNTCPGDKS----ALRPSGLRLGTPA  406 (483)
T ss_dssp             HH----TTCEEGGGSCSSSEEEEEGGGGTC-------CHHHHHHHHHHTTEECEEECCSSCSC----TTSCCEEEEECHH
T ss_pred             Hh----cCCEeccCCCCCceEEEeccCCCC-------CHHHHHHHHHhCCcEEecCCCCCCCc----CCCCceEEeecCC
Confidence            98    488876543 34567776643 11       23457778888999998    53311    1235789999987


Q ss_pred             CCC----HHHHHHHHHHHHHHHHH
Q psy15447        431 SHT----EQDMNSLIETLCKSHDI  450 (457)
Q Consensus       431 ~~t----~edi~~~~~~l~~~~~~  450 (457)
                      .+|    ++|+++++++|+++++.
T Consensus       407 ~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          407 LTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHh
Confidence            666    99999999999998876

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.94  E-value=3.1e-25  Score=219.15  Aligned_cols=287  Identities=12%  Similarity=0.111  Sum_probs=208.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH-----hcCCeEEEecCCCHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI-----ASRCKVQYFKHNNMQ  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~-----~~g~~~~~~~~~d~~  197 (457)
                      .++...+|+++|+++.|.+.+++++||++|+.. +.+++++||.|++..+.|++....+.     ..|.++..++.+|++
T Consensus        65 ~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~  143 (400)
T 3nmy_A           65 HNPTRFAYERCVAALEGGTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPA  143 (400)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHH
Confidence            567889999999999999999999999999987 56688999999999999987665543     358999999999999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.+++           ++++|++|+++|++|.+.|+++|+++|++||+++|+||+|+.+.+..   .  ..+     
T Consensus       144 ~l~~~i~~-----------~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~---~--~~~-----  202 (400)
T 3nmy_A          144 AFKAAIRA-----------DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQR---P--LSL-----  202 (400)
T ss_dssp             HHHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC---G--GGG-----
T ss_pred             HHHHHhcc-----------CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCC---h--hhc-----
Confidence            99988753           56899999999999999999999999999999999999997554321   1  112     


Q ss_pred             CccEEEecCcccccCc----cc--EEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGSV----GG--FCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~----gG--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~  351 (457)
                      ++|+++.|++|++|+.    ||  ++..++++++.++....  .++..++|..++.++..++.+.   .++++..+++.+
T Consensus       203 g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~--~~g~~~~~~~a~~~l~~l~~l~---~r~~~~~~~a~~  277 (400)
T 3nmy_A          203 GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN--SIGGVQGPFDSFLALRGLKTLP---LRMRAHCENALA  277 (400)
T ss_dssp             TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHH--HHCCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHH
T ss_pred             CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHH--hcCCCCCHHHHHHHHHhHhHHH---HHHHHHHHHHHH
Confidence            3589999999999743    56  45557778777764432  3344568888888877766553   367888899999


Q ss_pred             HHHHhhcccccCCeEEec-----------------cCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc--
Q psy15447        352 MHSLLSQHKVTQRFLVQG-----------------HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH--  412 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~-----------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--  412 (457)
                      +.+.|++   .+.+..+.                 ...+.++++.++.+.      ....++.+.|.-.++.+..+..  
T Consensus       278 l~~~L~~---~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~------~~~~~~~~~l~~~~~~~s~G~~~s  348 (400)
T 3nmy_A          278 LAQWLET---HPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF------DAAKRFCEKTELFTLAESLGGVES  348 (400)
T ss_dssp             HHHHHTT---CTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH------HHHHHHHHHCSSSEECSCCCSSSC
T ss_pred             HHHHHHc---CCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH------HHHHHHHHcCCcceEecCCCCCcc
Confidence            9999987   34443221                 123678999886532      1345666666543433332221  


Q ss_pred             ----Ccc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        413 ----LDQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       413 ----~~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                          |..            .....++.+|+++....+++.++.+.++|+
T Consensus       349 l~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~  397 (400)
T 3nmy_A          349 LVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV  397 (400)
T ss_dssp             EEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred             eeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence                111            011236789999988766665555554443

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.94  E-value=7.8e-26  Score=224.10  Aligned_cols=329  Identities=10%  Similarity=-0.011  Sum_probs=209.9

Q ss_pred             eeEEeecCCccCCCCChh----hHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEE--ecccH
Q psy15447         81 PCINFATHNYLSFVENPD----IEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETAL--YSFGF  150 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~----i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~--~~sG~  150 (457)
                      ..|||+.+.|++...+|.    +.+++.+.+...+  ..++....|..+..+.+++.+.+..|    .+++++  +++|+
T Consensus        29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~  106 (401)
T 7aat_A           29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKM--DKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGT  106 (401)
T ss_dssp             TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTC--CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHH
T ss_pred             CceeeeeeeEECCCCCEechHHHHHHHHHhccccc--ccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcch
Confidence            479999988877765555    5555555544322  22222234444555555554444333    456655  78888


Q ss_pred             HHHHHHHHhhc---CCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        151 STSASAIAAYV---KRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       151 ~a~~~ai~a~~---~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +|+..++.++.   ++||.|++..++|..+...++..|.++..++..       |++.+++.+++..        +++++
T Consensus       107 ~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--------~~~~~  178 (401)
T 7aat_A          107 GSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP--------EKSII  178 (401)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC--------TTCEE
T ss_pred             HHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCC--------CCcEE
Confidence            99998876654   899999999999999999999999988877643       6788888886532        45688


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCC--C-ccccccCCCCCCccEEEecCcccccCcc
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTG--H-GVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g--~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      +++++++||+|.+.+   +++|.++|++||+++|+||+|....++...  . .+....+.  ...+|+++|+||.+|..|
T Consensus       179 v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G  256 (401)
T 7aat_A          179 LLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQ--GIDVVLSQSYAKNMGLYG  256 (401)
T ss_dssp             EEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT--TCCCEEEEECTTTSCCGG
T ss_pred             EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhc--CCcEEEEecCCccccccc
Confidence            999999999998877   778999999999999999998754443210  0 01111111  123588999999998777


Q ss_pred             ---cEEEe---cHH----HHHHHHhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        295 ---GFCVG---SSY----IIEHHRLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       295 ---G~v~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                         ||++.   +++    +.+.+......  .+.+.+...++++...++.       .+..++.+++++++++++.+.|+
T Consensus       257 ~RiG~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~  334 (401)
T 7aat_A          257 ERAGAFTVICRDAEEAKRVESQLKILIRP--MYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLK  334 (401)
T ss_dssp             GCEEEEEEECSSHHHHHHHHHHHHHHHHH--HHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               88664   555    33333322111  1222344444444333321       12223567888899999999998


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      ++....++.+..+..+.+.++.+.           ...+...+.++||++.+             .+||+++. +|+++|
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ll~~~gi~v~~-------------~~Ris~~~-~~~~~i  389 (401)
T 7aat_A          335 KEGSSHNWQHITDQIGMFCFTGLK-----------PEQVERLTKEFSIYMTK-------------DGRISVAG-VASSNV  389 (401)
T ss_dssp             HTTCCSCCHHHHHCCSSEEECCCC-----------HHHHHHHHHHHCEECCT-------------TCEEEGGG-CCTTTH
T ss_pred             hcCCCCCCceecCCcceEEecCCC-----------HHHHHHHHHhCCEeccC-------------CCeEEecc-CChhhH
Confidence            721112244433444555544321           12233334567998753             37999875 456669


Q ss_pred             HHHHHHHHHHH
Q psy15447        438 NSLIETLCKSH  448 (457)
Q Consensus       438 ~~~~~~l~~~~  448 (457)
                      ++++++|++++
T Consensus       390 ~~~~~~l~~~~  400 (401)
T 7aat_A          390 GYLAHAIHQVT  400 (401)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998875

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.94  E-value=1.8e-25  Score=226.29  Aligned_cols=318  Identities=11%  Similarity=0.061  Sum_probs=224.4

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCC-CcccChHHHHHHHHHHHhhcCCCcEEEe-cccHHHHHHHHHhh----cCCCC----
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPR-GFYGTNVVHLDLENDIASFMGLEETALY-SFGFSTSASAIAAY----VKRND----  165 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~-~~~g~~~~~~~l~~~la~~~g~~~~i~~-~sG~~a~~~ai~a~----~~~gd----  165 (457)
                      +|++.+++.+++..|  .+..+. ...|..+...++++.+++++|.+..+++ ++|++|+..++.++    .++||    
T Consensus        79 ~p~v~~~~~~~~~~~--~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r  156 (474)
T 1wyu_B           79 NPKLHEEAARLFADL--HPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTR  156 (474)
T ss_dssp             CCHHHHHHHHTTSSC--CTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CHHHHHHHHHHHHhc--CCCCchhhChHHHHHHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCC
Confidence            588888777653222  121111 2456678899999999999998876544 77888988876654    35776    


Q ss_pred             -EEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CChHH
Q psy15447        166 -AVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CPLKD  238 (457)
Q Consensus       166 -~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~l~~  238 (457)
                       .|++..++|+++...+...|.+++.++.+     |+++|++.+.+           ++++|+++++ |++|.+ .++++
T Consensus       157 ~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~-----------~t~~v~~~~p-n~~G~~~~~l~~  224 (474)
T 1wyu_B          157 RVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELGP-----------HVAALMLTNP-NTLGLFERRILE  224 (474)
T ss_dssp             CEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCST-----------TEEEEEECSS-CTTSCCCTTHHH
T ss_pred             CEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcCHHHHHHhhCC-----------CceEEEEECC-CCCcccCCCHHH
Confidence             89999999999999999999999988865     88999888743           4578888886 579988 69999


Q ss_pred             HHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc-------ccEEEecHHHHHHHHhh-
Q psy15447        239 ILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV-------GGFCVGSSYIIEHHRLS-  310 (457)
Q Consensus       239 i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~-------gG~v~~~~~~~~~~~~~-  310 (457)
                      |+++|++||+++|+||+|+.+.+|..   ....+     ++|+++.|+||+++.+       .|++++++++++.+... 
T Consensus       225 i~~l~~~~g~~li~Dea~~~~~~g~~---~~~~~-----g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~  296 (474)
T 1wyu_B          225 ISRLCKEAGVQLYYDGANLNAIMGWA---RPGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPL  296 (474)
T ss_dssp             HHHHHHHHTCEEEEEGGGGGGTTTTC---CHHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCE
T ss_pred             HHHHHHHcCCEEEEeCchhhhhccCC---CcccC-----CCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCe
Confidence            99999999999999999987665421   11122     3489999999999643       48899998877655310 


Q ss_pred             ----CCccee------------cCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-
Q psy15447        311 ----GSGYCF------------SASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-  371 (457)
Q Consensus       311 ----~~~~~~------------~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-  371 (457)
                          +..+.+            +...+++.++++.+.++.+..  ..+..+++.++++++.+.|++    .|+++.... 
T Consensus       297 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~  372 (474)
T 1wyu_B          297 VERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE----KGYRVPYDGP  372 (474)
T ss_dssp             EEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCBCSSCSS
T ss_pred             eeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cCcEecCCCC
Confidence                001111            112466777777777664322  234578888999999999988    366653222 


Q ss_pred             CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        372 DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       372 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ....+++.+....       ...++.++|.++||.+....++    ....+.+|++++..+|++|+++++++|++++++
T Consensus       373 ~~~~~~~~~~~~~-------~~~~l~~~L~~~Gi~~~~~~~~----~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~  440 (474)
T 1wyu_B          373 SMHEFVAQPPEGF-------RALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTETEAKETLEAFAEAMGALLKK  440 (474)
T ss_dssp             CCSCEEEBCSTTC-------CHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEEcCCCC-------CHHHHHHHHHHCCccccccccc----cccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence            1121444442222       3567999999999986332222    112578999999989999999999999988754

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.94  E-value=6.6e-25  Score=217.36  Aligned_cols=289  Identities=12%  Similarity=0.125  Sum_probs=210.3

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~l  199 (457)
                      ++...+|++.+++++|.+..+++++|++|+..++. ++++||.|++..+.|+++...+    +..|.++..++.+|++++
T Consensus        66 ~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l  144 (403)
T 3cog_A           66 NPTRNCLEKAVAALDGAKYCLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLL  144 (403)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHH
T ss_pred             CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence            46678999999999999889999999999999999 8899999999999998765543    457899999999899999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC-cEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ-ARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g-~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      ++.++           +++++|++++++||+|.+.|+++|.++|++|| +++|+||+|+.+.+..   .    .+   .+
T Consensus       145 ~~~i~-----------~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~---~----~~---~~  203 (403)
T 3cog_A          145 EAAIT-----------PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQR---P----LA---LG  203 (403)
T ss_dssp             HHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCC---T----TT---TT
T ss_pred             HHhcC-----------cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCC---c----cc---cC
Confidence            88874           25678999999999999999999999999999 9999999998765421   1    11   24


Q ss_pred             ccEEEecCcccccCc----ccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGSV----GGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~~----gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      .|+++.|++|++|+.    +|+++++ +++++.++....  .++...+|+.++++.++++.+.   .++++..++...+.
T Consensus       204 ~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~--~~g~~~~~~~~~~~~~~l~~l~---~r~~~~~~n~~~l~  278 (403)
T 3cog_A          204 ADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQN--SLGAVPSPIDCYLCNRGLKTLH---VRMEKHFKNGMAVA  278 (403)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhhhhHHH---HHHHHHHHHHHHHH
Confidence            589999999999753    4898884 788777764332  2344568888887777765442   35566667777776


Q ss_pred             HHhhccc-----------ccCCeEEecc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecc---c-----
Q psy15447        354 SLLSQHK-----------VTQRFLVQGH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP---S-----  411 (457)
Q Consensus       354 ~~L~~~~-----------~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~-----  411 (457)
                      +.|++..           ..+++.+..+   ..+.++.+.++...         .++.+.+.+.|+.+...   .     
T Consensus       279 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~---------~~~~~~l~~~~i~~~~~s~G~~~sl~  349 (403)
T 3cog_A          279 QFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTL---------QHAEIFLKNLKLFTLAESLGGFESLA  349 (403)
T ss_dssp             HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCH---------HHHHHHHHHCSSSEECSCCSSSSCEE
T ss_pred             HHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCH---------HHHHHHHHhCCcceEccCCCCcceee
Confidence            6665521           1123332211   23778888776431         23445566678865432   1     


Q ss_pred             -cCccc------------cCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        412 -HLDQE------------AKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       412 -~~~~~------------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                       +|...            ....++.+|++++...++++++.+.++|++++
T Consensus       350 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~  399 (403)
T 3cog_A          350 ELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAH  399 (403)
T ss_dssp             ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred             ecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence             22110            01225799999999888888888888877654

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.94  E-value=4.9e-26  Score=222.10  Aligned_cols=321  Identities=11%  Similarity=0.065  Sum_probs=219.7

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcC-CCCCCC---CCcccChHHHHHHHHHHHhhcCCC---cEEEeccc-HH
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNG-VGSCGP---RGFYGTNVVHLDLENDIASFMGLE---ETALYSFG-FS  151 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~-~~~~~~---~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sG-~~  151 (457)
                      ++++++..+.+   ..+|.+.+++.+.+.++. .+...+   ...++..+...++++.+++++|.+   .+++++++ ++
T Consensus         2 ~~~~~~~~g~~---~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~   78 (360)
T 1w23_A            2 KQVFNFNAGPS---ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASL   78 (360)
T ss_dssp             CCCEECCSSSC---CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH
T ss_pred             CceEeecCCCc---CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchH
Confidence            34556655432   346889999998886541 111100   002344567889999999999975   34555555 78


Q ss_pred             HHHHHHHhhcCC---CCEEEEeCcccHHHHHHHHhcCCeEEEecC------CCHHHHHH-HHHhhchhcccCCCCccEEE
Q psy15447        152 TSASAIAAYVKR---NDAVFVDENINFAIQTGLIASRCKVQYFKH------NNMQHLEE-LLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       152 a~~~ai~a~~~~---gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------~d~~~le~-~l~~~~~~~~~~~~~~~~~v  221 (457)
                      |+..++.++..+   +|.|+.+.+.|.+.. .+...| +++.++.      .|++++++ .+.           +++++|
T Consensus        79 al~~~~~~l~~~~~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~-----------~~~k~v  145 (360)
T 1w23_A           79 QFTMLPMNLLTKGTIGNYVLTGSWSEKALK-EAKLLG-ETHIAASTKANSYQSIPDFSEFQLN-----------ENDAYL  145 (360)
T ss_dssp             HHHHHHHHHCCTTCEEEEEECSHHHHHHHH-HHHTTS-EEEEEEECGGGTSCSCCCGGGCCCC-----------TTEEEE
T ss_pred             HHHHHHHHhcCCCCcccEEEecchhHHHHH-HHHHhC-CeEEeecccccCcCCccchHhhccC-----------CCCCEE
Confidence            999988888754   667777777776643 345667 8777653      35555655 431           356788


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~  300 (457)
                      ++++++|++|.+.|     +|+++||+++|+||+|+.|...         .++  ...|+++.|+||++|+.| |+++++
T Consensus       146 ~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~---------~~~--~~~di~~~s~sK~~~~~G~G~~~~~  209 (360)
T 1w23_A          146 HITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRP---------LKV--NQFGMIYAGAQKNLGPSGVTVVIVK  209 (360)
T ss_dssp             EEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSC---------CCG--GGCSEEEEETTTTTSCTTCEEEEEE
T ss_pred             EEeCCCCCcceecc-----cccccCCceEEEechhhcCCCC---------cCc--ccCCEEEEEcccccCCCCcEEEEEc
Confidence            88999999999976     3444899999999999875321         111  122799999999998767 999999


Q ss_pred             HHHHHHHHhhCC-----------cceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-
Q psy15447        301 SYIIEHHRLSGS-----------GYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-  365 (457)
Q Consensus       301 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-  365 (457)
                      +++++.++....           ++.+ ++.+...++++.++++.+.+.   ++++++++++.+++.+.|++   .+++ 
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~  285 (360)
T 1w23_A          210 KDLLNTKVEQVPTMLQYATHIKSDSLY-NTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDE---SNGFY  285 (360)
T ss_dssp             HHHHCSCCTTCCGGGCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT---TTTSS
T ss_pred             HHHHhhcccCCcchhhhhhhhhccCCC-CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH---ccCcc
Confidence            887765533211           1111 234666666777778776543   45788899999999999988   3334 


Q ss_pred             EEe--ccCC-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHH
Q psy15447        366 LVQ--GHRD-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       366 ~~~--~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                      ...  .... +.++++.+++..       ...++.++|.++||.+.++..       ..+++|++++..+|++|++++++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~gi~~~~~~~-------~~~~iRis~~~~~~~~~i~~~~~  351 (360)
T 1w23_A          286 VGHAEKGSRSLMNVTFNLRNEE-------LNQQFLAKAKEQGFVGLNGHR-------SVGGCRASIYNAVPIDACIALRE  351 (360)
T ss_dssp             EESSCGGGBCSSEEEEECSSHH-------HHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHH
T ss_pred             cccCCchhccCcEEEEEcCCCc-------cHHHHHHHHHHCCeeeecCCC-------CCCeEEEEecCCCCHHHHHHHHH
Confidence            432  1112 347888775422       456788889999999865431       14789999998899999999999


Q ss_pred             HHHHHHHH
Q psy15447        443 TLCKSHDI  450 (457)
Q Consensus       443 ~l~~~~~~  450 (457)
                      +|++++++
T Consensus       352 ~l~~~~~~  359 (360)
T 1w23_A          352 LMIQFKEN  359 (360)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhh
Confidence            99998765

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.94  E-value=1.4e-25  Score=229.99  Aligned_cols=338  Identities=10%  Similarity=-0.007  Sum_probs=222.5

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-------CcEEEecccHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-------EETALYSFGFSTS  153 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sG~~a~  153 (457)
                      .++||+.+.+ ++. +|++.+++.+++.....  .  ....|..+....+++.+.+..+.       +.++++++|++|+
T Consensus       104 ~~i~l~~g~~-~~~-~~~~v~a~~~~~~~~~y--~--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al  177 (533)
T 3f6t_A          104 DAVNYCHTEL-GLN-RDKVVAEWVNGAVANNY--P--VPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAI  177 (533)
T ss_dssp             HHHHHHHHTT-CCC-HHHHHHHHHHHHHTCSC--C--SSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHH
T ss_pred             hheeccCCCC-CcC-CcHHHHHHHHHHHhCCC--C--CCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHH
Confidence            4677776655 443 68888888888875321  1  11235566666677766555232       4567777888999


Q ss_pred             HHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---------CHHHHHHHHHhhchhcccCCCCccE
Q psy15447        154 ASAIAA-----YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---------NMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       154 ~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---------d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      ..++.+     ++++||.|+++.++|.++...+...|..+..++.+         |++++++.+.           ++++
T Consensus       178 ~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~-----------~~~k  246 (533)
T 3f6t_A          178 VYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD-----------PSIK  246 (533)
T ss_dssp             HHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC-----------TTEE
T ss_pred             HHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC-----------CCCe
Confidence            999987     78999999999999999998888888888877653         6888888763           2457


Q ss_pred             EEEEecCCCCCCCCCChH---HHHHHHH-HcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-
Q psy15447        220 FIIVEGVYMNSADICPLK---DILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~l~---~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      +|++++++||+|.+.|.+   +|+++|+ +||+++|+||+|+....+  +..+..   ..+ +.+++++||||.+|..| 
T Consensus       247 ~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~--~~~~~~---~~~-~~~i~~~S~SK~~g~~G~  320 (533)
T 3f6t_A          247 ALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN--FKSIYS---VVP-YNTMLVYSYSKLFGCTGW  320 (533)
T ss_dssp             EEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT--CCCHHH---HSG-GGEEEEEESHHHHTCGGG
T ss_pred             EEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC--ccCHhh---cCC-CCEEEEecCcccCCCccc
Confidence            777778999999999865   8888888 689999999999754332  222211   112 34699999999998777 


Q ss_pred             --cEEEecHH-----HHHHH--------------------------------HhhCCcceecCCCcHHHHHHHHHHHHHH
Q psy15447        295 --GFCVGSSY-----IIEHH--------------------------------RLSGSGYCFSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       295 --G~v~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~~aaa~a~l~~~  335 (457)
                        ||++++++     +++.+                                +. ...+.+++..++...++++.++..+
T Consensus       321 RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~-~~~~~~~~~~~~~q~a~a~~a~~~L  399 (533)
T 3f6t_A          321 RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRS-IGLYHTAGLSTPQQIMEALFSMTHL  399 (533)
T ss_dssp             CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTT-TTTGGGCSCCHHHHHHHHHHHHHHH
T ss_pred             ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHH-HHHhcccCCChHHHHHHHHHHHHHH
Confidence              99988765     33321                                11 1122222222333333332233333


Q ss_pred             h----------hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch----HHH-----HHHHHHH
Q psy15447        336 K----------ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE----VAS-----KKLLQTI  396 (457)
Q Consensus       336 ~----------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~-----~~~~~~~  396 (457)
                      .          ..++++++++++.+++.+.|.     .++.+..+..+.++++.+..-...    +..     .....++
T Consensus       400 ~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-----~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~  474 (533)
T 3f6t_A          400 LTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-----APKDETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDF  474 (533)
T ss_dssp             TTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-----CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHH
T ss_pred             hhhccccchHHHHHHHHHHHHHHHHHHHHhcC-----CCccccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHH
Confidence            2          113466778888888888885     234444344566666665420000    000     0012345


Q ss_pred             HHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        397 CDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       397 ~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +..++ ++||++.++..+..    +.+++|+++.. ++++++++++++|++++++..
T Consensus       475 ~~~ll~~~GV~v~pg~~f~~----~~~~iRls~a~-~~~e~i~~~i~~L~~~l~~~~  526 (533)
T 3f6t_A          475 LLKLAEKNGVVLVDGVGFGA----KPGELRVSQAN-LPTEDYALIGKQVLELLKEYY  526 (533)
T ss_dssp             HHHHHHHTTSSSCTTEEECS----STTEEEEESSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCEEEeCCcccCC----CCCEEEEEEee-CCHHHHHHHHHHHHHHHHHHH
Confidence            55555 67999998776532    35799999843 789999999999999988764

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.94  E-value=1.8e-25  Score=224.82  Aligned_cols=333  Identities=11%  Similarity=0.027  Sum_probs=221.0

Q ss_pred             CCee-eEEeecCCccCCCCChhhHHHHHHHHHhcC----CCCCCCCCcccChHHHHHHHHHHHhhc-CC-------CcEE
Q psy15447         78 NGIP-CINFATHNYLSFVENPDIEKCAIDCIDKNG----VGSCGPRGFYGTNVVHLDLENDIASFM-GL-------EETA  144 (457)
Q Consensus        78 ~G~~-~id~~s~~~l~~~~~p~i~~a~~~~l~~~~----~~~~~~~~~~g~~~~~~~l~~~la~~~-g~-------~~~i  144 (457)
                      |+++ .|||+.+.|+++.+++.+.+++.+++.+..    .....+....|    ..++++.+++++ |.       ++++
T Consensus        46 ~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G----~~~lr~~ia~~l~g~~~~~~~~~~i~  121 (448)
T 3meb_A           46 DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAG----FPLFLEAAQFLMFGKDSKAAQEGRIA  121 (448)
T ss_dssp             CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTC----CHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred             CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcc----hHHHHHHHHHHhcCCCccccCcCcEE
Confidence            4544 699999999888877777777777744321    22222222233    356677777765 64       3567


Q ss_pred             E--ecccHHHHHH--HHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecC---C-----CHHHHHHHHHhhch
Q psy15447        145 L--YSFGFSTSAS--AIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKH---N-----NMQHLEELLRQQDE  208 (457)
Q Consensus       145 ~--~~sG~~a~~~--ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~---~-----d~~~le~~l~~~~~  208 (457)
                      +  +++|++|+..  .+.+++.+||.|+++.++|..+...+.    ..|.++..++.   +     |++++++.+++.. 
T Consensus       122 ~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~-  200 (448)
T 3meb_A          122 SCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAP-  200 (448)
T ss_dssp             EEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSC-
T ss_pred             EEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCC-
Confidence            7  8888999876  456678899999999999999998888    88988887765   2     7888988887532 


Q ss_pred             hcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCC--CCcccccc-CCCCCCccEE
Q psy15447        209 RDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGST--GHGVTEYF-GVSTEEVDMI  282 (457)
Q Consensus       209 ~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~--g~~~~~~~-~~~~~~~Di~  282 (457)
                             .+++++++.+++||+|.+.+   +++|.++|++||+++|+||+|+...++..  .......+ +..  ...++
T Consensus       201 -------~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~--~~~i~  271 (448)
T 3meb_A          201 -------EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAG--VEVLV  271 (448)
T ss_dssp             -------TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTT--CCEEE
T ss_pred             -------CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcC--CcEEE
Confidence                   34678888999999999988   55699999999999999999875444320  00111111 111  22588


Q ss_pred             EecCcccccCcc---cEE--Ee---------cH----HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-------hh
Q psy15447        283 IGSLEHALGSVG---GFC--VG---------SS----YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-------KA  337 (457)
Q Consensus       283 ~~s~sK~lg~~g---G~v--~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-------~~  337 (457)
                      +.|+||.+|..|   ||+  ++         ++    .+++.+..... ..++ +.+.+.++++.+.++..       +.
T Consensus       272 ~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~  349 (448)
T 3meb_A          272 AQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIR-KTWS-MSAIHGAYIVQVIVHDKRLLQMFYDN  349 (448)
T ss_dssp             EEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHH-TTTS-SCCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             EecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHh-cccC-CccHHHHHHHHHHhcChHHHHHHHHH
Confidence            999999998766   886  55         45    55555543211 1121 24556655555554321       12


Q ss_pred             CcHHHHHHHHHHHHHHHHhhcccccCC------eEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHH-HHcCeeEecc
Q psy15447        338 NPSLLTKLREKCNTMHSLLSQHKVTQR------FLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMC-IQAGFAITCP  410 (457)
Q Consensus       338 ~~~~~~~l~~~~~~l~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~  410 (457)
                      .++++++++++++++.+.|+++. .++      +.+..+..+.+.+..+.            .+++..| .++||++.++
T Consensus       350 ~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~ll~~~gV~v~~G  416 (448)
T 3meb_A          350 VKEMSARIHRMRSLLHASLAKRK-TPGPGSKGTWDHILTAIGMFTFTGLT------------PEHVDYLKEKWSIYLVKA  416 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT-CCCSTTTCCCTHHHHCCSSEEECCCC------------HHHHHHHHHHHCEEECSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhC-CCCcCcccccceeCCCceEEEecCCC------------HHHHHHHHHhCCEEEeCC
Confidence            24567888899999999998721 123      33333344554443331            1345555 4569999764


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .            .||++. .+++++|++++++|+++++.+.
T Consensus       417 ~------------gRis~a-~~~~~~i~~~~~~l~~~l~~~~  445 (448)
T 3meb_A          417 G------------GRMSMC-GLTESNCDYVAEAIHDAVTKLP  445 (448)
T ss_dssp             G------------GEEEGG-GCCTTTHHHHHHHHHHHHHHSC
T ss_pred             C------------cEEEEe-cCCHHHHHHHHHHHHHHHHhcc
Confidence            2            389885 3577889999999999987543

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.94  E-value=5.7e-25  Score=219.22  Aligned_cols=289  Identities=13%  Similarity=0.072  Sum_probs=207.8

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEe-cCCCHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYF-KHNNMQ  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~-~~~d~~  197 (457)
                      ..+...++++++++++|.+.++++++|++|+..++++++++||.|++..+.|.++...+    ...|.++..+ +.+|++
T Consensus        56 ~~~~~~~l~~~la~~~g~~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~  135 (421)
T 2ctz_A           56 MNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPE  135 (421)
T ss_dssp             BCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHH
T ss_pred             CChHHHHHHHHHHHHhCCCceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHH
Confidence            45778999999999999988999999999999999999999999999999998877765    6779999999 888999


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc-ccccccCCCCccccccCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV-SFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~-~~g~~g~~g~~~~~~~~~~~  276 (457)
                      ++++.+++           ++++|++++++|++|.+.|+++|+++|++||+++|+||+| ++|..+   ..+    +   
T Consensus       136 ~l~~~i~~-----------~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~---~~~----~---  194 (421)
T 2ctz_A          136 EFLALTDE-----------KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL---RPL----A---  194 (421)
T ss_dssp             HHHHHCCT-----------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC---CGG----G---
T ss_pred             HHHHhhcc-----------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC---Ccc----c---
Confidence            99988753           5678999999999999999999999999999999999999 776432   211    2   


Q ss_pred             CCccEEEecCcccccCc----ccEEEec--HHH----HHHHHhh---CC---------------------cceecCCCcH
Q psy15447        277 EEVDMIIGSLEHALGSV----GGFCVGS--SYI----IEHHRLS---GS---------------------GYCFSASLPP  322 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~----gG~v~~~--~~~----~~~~~~~---~~---------------------~~~~~~~~~~  322 (457)
                      .++|+++.|++|++|+.    ||+++.+  .++    .+.++..   .+                     ...++..++|
T Consensus       195 ~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~  274 (421)
T 2ctz_A          195 WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGP  274 (421)
T ss_dssp             GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCH
T ss_pred             cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence            13489999999999753    4555552  111    1222110   00                     0123446789


Q ss_pred             HHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec------------------cCCCCeEEEEecCCc
Q psy15447        323 FLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG------------------HRDTPLKYLYLQKSD  384 (457)
Q Consensus       323 ~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~~~~~~i~~~~~~  384 (457)
                      +.+++++..++.+.   .+.++..++.+++.+.|++   .+++....                  ...++++.+.+.+..
T Consensus       275 ~~a~~~~~~l~~l~---~r~~~~~~~a~~l~~~L~~---~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~  348 (421)
T 2ctz_A          275 FEAWVVLLGMETLS---LRAERHVENTLHLAHWLLE---QPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY  348 (421)
T ss_dssp             HHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHT---CTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH
T ss_pred             HHHHHHHcCcchHH---HHHHHHHHhHHHHHHHHHh---CCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH
Confidence            88888877776553   3566777899999999988   56776542                  234778888886521


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEeccc------cCcc----c--------cCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPS------HLDQ----E--------AKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~----~--------~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                            .....+.+.+...++.++.+.      +|..    .        ....++.+|++++.    +|+|++++.|++
T Consensus       349 ------~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~  418 (421)
T 2ctz_A          349 ------EAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKE  418 (421)
T ss_dssp             ------HHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHH
T ss_pred             ------HHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHH
Confidence                  134556666654455444331      1111    0        01124799999875    466666776666


Q ss_pred             HH
Q psy15447        447 SH  448 (457)
Q Consensus       447 ~~  448 (457)
                      ++
T Consensus       419 al  420 (421)
T 2ctz_A          419 AL  420 (421)
T ss_dssp             HT
T ss_pred             Hh
Confidence            54

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.94  E-value=4.7e-24  Score=210.58  Aligned_cols=305  Identities=14%  Similarity=0.110  Sum_probs=221.1

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-------cCCCCEEE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-------VKRNDAVF  168 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-------~~~gd~v~  168 (457)
                      +|++.+++.+++++..         +...+...++++.+++++|.+.++++++|++|+..++.++       .++||.|+
T Consensus        14 ~~~~~~a~~~~~~~~~---------~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi   84 (390)
T 3b8x_A           14 DDLEYKAIQSVLDSKM---------FTMGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEII   84 (390)
T ss_dssp             CHHHHHHHHHHHHHTC---------CSSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEE
T ss_pred             CHHHHHHHHHHHHcCC---------CCCChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEE
Confidence            5889999999987621         1235678999999999999999999999999999999998       78899999


Q ss_pred             EeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH
Q psy15447        169 VDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL  242 (457)
Q Consensus       169 ~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l  242 (457)
                      ++.+.|.++...+...|.++..++.+      |++++++.+++           ++++|++.+   +.|...|+++|.++
T Consensus        85 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-----------~~~~v~~~~---~~g~~~~~~~i~~l  150 (390)
T 3b8x_A           85 VPAVSWSTTYYPLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-----------STKAILTVN---LLGNPNNFDEINKI  150 (390)
T ss_dssp             EESSSCHHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-----------TEEEEEEEC---GGGCCCCHHHHHHH
T ss_pred             ECCCCcHHHHHHHHHcCCEEEEEecCccccCcCHHHHHHHhCc-----------CCeEEEEEC---CccChhhHHHHHHH
Confidence            99999999999999999998887754      78888887743           345666643   45778999999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEecH-HHHHHHHhhC-Cc----
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGSS-YIIEHHRLSG-SG----  313 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~~-~~~~~~~~~~-~~----  313 (457)
                      |++||+++|+||+|++|... .+    ..+|..+   |+...|+  +|.++ +.||++++++ ++.+.++... .+    
T Consensus       151 ~~~~~~~li~D~a~~~g~~~-~~----~~~g~~~---~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~  222 (390)
T 3b8x_A          151 IGGRDIILLEDNCESMGATF-NN----KCAGTFG---LMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRN  222 (390)
T ss_dssp             HTTSCCEEEEECTTCTTCEE-TT----EETTSSS---SEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTT
T ss_pred             HHHcCCEEEEECcCcccCEE-CC----ccccccc---ceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCcc
Confidence            99999999999999976543 22    2344432   4554333  45553 4578888875 6655543211 11    


Q ss_pred             -------------------c-----eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec
Q psy15447        314 -------------------Y-----CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG  369 (457)
Q Consensus       314 -------------------~-----~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~  369 (457)
                                         +     .+...++++.++++++.++.++   +..++.+++.+++.+.|++   ++++.+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~---~~~~~~~~~~~~l~~~L~~---~~~~~~~~  296 (390)
T 3b8x_A          223 LPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP---RFISVRRKNAEYFLDKFKD---HPYLDVQQ  296 (390)
T ss_dssp             SCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTT---CSSEEECC
T ss_pred             ccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcC---CCCcccCC
Confidence                               0     1222368888888888877664   4778889999999999988   56777754


Q ss_pred             cC-CC--CeEEEEecC--CcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-cc-C--C----------------CCCeE
Q psy15447        370 HR-DT--PLKYLYLQK--SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EA-K--K----------------QKPSI  424 (457)
Q Consensus       370 ~~-~~--~~~~i~~~~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~-~--~----------------~~~~l  424 (457)
                      +. ..  ..+++.+..  ..       ...++.+.|.++||.+++...+.. .. +  .                ....+
T Consensus       297 ~~~~~~~~~~~i~~~~~~~~-------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  369 (390)
T 3b8x_A          297 ETGESSWFGFSFIIKKDSGV-------IRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGL  369 (390)
T ss_dssp             CCSBCCCCEEEEEECTTSCC-------CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEE
T ss_pred             CCCCcccEEEEEEecCcCcc-------cHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEE
Confidence            32 22  235556653  12       345788999999999886322110 01 0  0                01369


Q ss_pred             EEEecCCCCHHHHHHHHHHH
Q psy15447        425 RITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       425 Ri~~~~~~t~edi~~~~~~l  444 (457)
                      |++++..+|++|+++++++|
T Consensus       370 ~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          370 FVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             EEECCSSCCHHHHHHHHHHT
T ss_pred             EeeCCCCCCHHHHHHHHHhh
Confidence            99999999999999999886

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.94  E-value=2.5e-24  Score=219.48  Aligned_cols=312  Identities=14%  Similarity=0.131  Sum_probs=213.6

Q ss_pred             ChHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC--------------CCCEEEEeCcccHHHHHHHHhc
Q psy15447        123 TNVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK--------------RNDAVFVDENINFAIQTGLIAS  184 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~--------------~gd~v~~~~~~h~~~~~~~~~~  184 (457)
                      ..+...++.+.+++++|.+    ..+++++|++|+..++.++..              +++.|+++...|.++.++++..
T Consensus       133 ~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~  212 (511)
T 3vp6_A          133 FVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAAL  212 (511)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHc
Confidence            3445555666777778865    567888999999988877654              5678999999999999999999


Q ss_pred             CC---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc
Q psy15447        185 RC---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV  256 (457)
Q Consensus       185 g~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~  256 (457)
                      |.   +++.++.+     |+++|++.|++....     ...+++|+++.+++++|.+.|+++|.++|++||+++++|++|
T Consensus       213 g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~-----g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~  287 (511)
T 3vp6_A          213 GFGTDNVILIKCNERGKIIPADFEAKILEAKQK-----GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAW  287 (511)
T ss_dssp             TSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETT
T ss_pred             CCCCCcEEEeecCCCCccCHHHHHHHHHHHHhc-----CCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccc
Confidence            87   78888765     899999999764321     123678999999999999999999999999999999999999


Q ss_pred             ccccccC-CCCccccccCCCCCCccEEEecCcccccCc--ccEE-EecHHHHHHHHhhCCcceecC--------------
Q psy15447        257 SFGTLGS-TGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFC-VGSSYIIEHHRLSGSGYCFSA--------------  318 (457)
Q Consensus       257 ~~g~~g~-~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v-~~~~~~~~~~~~~~~~~~~~~--------------  318 (457)
                      +.|.+.. ..+.  ...|+  .++|+++.+.+|+++.+  .|++ +.++............|.+..              
T Consensus       288 ~~~~~~~~~~~~--~~~g~--~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~  363 (511)
T 3vp6_A          288 GGGLLMSRKHRH--KLNGI--ERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKA  363 (511)
T ss_dssp             GGGGGGCTTTGG--GGTTG--GGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGS
T ss_pred             hhhHhhChhhhh--hccCC--ccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCC
Confidence            8876522 1111  11233  35699999999999643  2444 445555555432222222211              


Q ss_pred             -----CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCc------c
Q psy15447        319 -----SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSD------D  385 (457)
Q Consensus       319 -----~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~------~  385 (457)
                           ....+.+.+++..+.. +..+++.++..++++++.+.|++   .+|+++..  ++..+++.+.+....      +
T Consensus       364 ~~~~r~~~al~~~~al~~~g~-~gl~~~~~~~~~~a~~l~~~L~~---~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~  439 (511)
T 3vp6_A          364 IQCGRHVDIFKFWLMWKAKGT-VGFENQINKCLELAEYLYAKIKN---REEFEMVFNGEPEHTNVCFWYIPQSLRGVPDS  439 (511)
T ss_dssp             SCSSCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS---CTTEEESSSSCCSSSCEEEEECCGGGSSCCCC
T ss_pred             CCCCCchHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEecCCCCeEEEEEEEeCccccccccc
Confidence                 1233444444443321 12246788999999999999988   57999876  356677766553211      0


Q ss_pred             -h--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        386 -E--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       386 -~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                       .  ........++.+.|.++|+++.....  .  ....+++|+++ +..+|++||++++++|+++.+.+
T Consensus       440 ~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~--~--~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~  505 (511)
T 3vp6_A          440 PQRREKLHKVAPKIKALMMESGTTMVGYQP--Q--GDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL  505 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSCEEEEEE--E--TTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCEEEEEEE--e--CCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence             0  01112345789999999976543211  0  11234799999 78899999999999999887654

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.94  E-value=3.3e-25  Score=216.55  Aligned_cols=307  Identities=10%  Similarity=0.059  Sum_probs=213.5

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCC-----CCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCC
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGP-----RGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRND  165 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~-----~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd  165 (457)
                      .+|++++++.+.+.++. +.+.+     .......+..+++++++++++|.+   +++++ ++|++++..++.+++++||
T Consensus        15 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd   93 (362)
T 2c0r_A           15 LPLEVLERAQAEFVDYQ-HTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQ   93 (362)
T ss_dssp             CCHHHHHHHHHTSSSST-TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTC
T ss_pred             CCHHHHHHHHHHHhhhh-hcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCC
Confidence            46899999999887642 11111     011123456789999999999976   44555 6788999999999999999


Q ss_pred             EEEEeCcccHHH--HHHHHhcCCeEEEecCC---------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-
Q psy15447        166 AVFVDENINFAI--QTGLIASRCKVQYFKHN---------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-  233 (457)
Q Consensus       166 ~v~~~~~~h~~~--~~~~~~~g~~~~~~~~~---------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-  233 (457)
                      .|++....|...  ...++..| ++..++.+         |.++++  +   .        +++++|++.+++|++|.+ 
T Consensus        94 ~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i---~--------~~t~~v~~~~~~n~tG~~~  159 (362)
T 2c0r_A           94 TANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--L---Q--------DNAAYLHLTSNETIEGAQF  159 (362)
T ss_dssp             EEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--C---C--------TTEEEEEEESEETTTTEEC
T ss_pred             eEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--c---C--------CCcCEEEEeCCcCccceec
Confidence            887665443332  34455567 77665432         222221  1   1        356888888889999995 


Q ss_pred             CChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCC
Q psy15447        234 CPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       234 ~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~  312 (457)
                      .|+++|      ||+++|+||+|++|...         .++  .+.|+++.|+||++|+.| ||+++++++++.+.....
T Consensus       160 ~~l~~i------~~~~vivD~a~~~~~~~---------~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~  222 (362)
T 2c0r_A          160 KAFPDT------GSVPLIGDMSSDILSRP---------FDL--NQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLP  222 (362)
T ss_dssp             SSCCCC------TTSCEEEECTTTTTSSC---------CCG--GGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSC
T ss_pred             cccccc------CCCEEEEEChhhccCCc---------cch--hHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCc
Confidence            777776      89999999999876321         122  223899999999999777 999999887665532110


Q ss_pred             cc----------eecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCC-e-EEecc---CCCC
Q psy15447        313 GY----------CFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQR-F-LVQGH---RDTP  374 (457)
Q Consensus       313 ~~----------~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~-~-~~~~~---~~~~  374 (457)
                      .+          ...++.++...+++.++++.+.+.   ++++++++++++++.+.|++    .+ + ++..+   ....
T Consensus       223 ~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~  298 (362)
T 2c0r_A          223 TMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQ----SGGFYRGCVDVDSRSDM  298 (362)
T ss_dssp             GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT----STTSSEESSCGGGBCSS
T ss_pred             hHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH----cCCccccCCChHHcCCc
Confidence            00          112345777778888888876553   56788999999999999988    34 5 55321   2345


Q ss_pred             eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        375 LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       375 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ++++.++...       ...++++.|.++||.+.++..       ..+.+|+++...+|++|+++++++|+++++..
T Consensus       299 ~~~~~~~~~~-------~~~~~~~~L~~~gi~~~~g~~-------~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~  361 (362)
T 2c0r_A          299 NITFRLASEE-------LEKEFVKASEQEGFVGLKGHR-------SVGGLRASIYNAVPYESCEALVQFMEHFKRSR  361 (362)
T ss_dssp             EEEEECSCHH-------HHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCcc-------hHHHHHHHHHHCCCeeccCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            6777665422       456789999999997765431       13579999998899999999999999987653

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.94  E-value=2e-24  Score=217.43  Aligned_cols=329  Identities=10%  Similarity=0.020  Sum_probs=225.1

Q ss_pred             CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-------EEEecccHHHHHHHHHhhcC-----
Q psy15447         95 ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-------TALYSFGFSTSASAIAAYVK-----  162 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sG~~a~~~ai~a~~~-----  162 (457)
                      .+|.+.+++.+.+.+....+.   ...+..+...++.+.+++++|.+.       ++++++|++|+..++.++..     
T Consensus        54 ~~~~v~e~~~~a~~~~~~~~~---~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~  130 (452)
T 2dgk_A           54 DDENVHKLMDLSINKNWIDKE---EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKR  130 (452)
T ss_dssp             CCHHHHHHHHHTTTCBTTCTT---TCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhccCCCChh---hChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHH
Confidence            468888888888765332221   223456677888888999999652       67888999999999887653     


Q ss_pred             ---CC-----CEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCC
Q psy15447        163 ---RN-----DAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYM  228 (457)
Q Consensus       163 ---~g-----d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~  228 (457)
                         +|     +.|++.. +|.++...++..|.+++.++.+      |+++|++.+.+           ++++|++..+++
T Consensus       131 ~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-----------~t~~v~~~~~~n  198 (452)
T 2dgk_A          131 MEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE-----------NTIGVVPTFGVT  198 (452)
T ss_dssp             HHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT-----------TEEEEECBBSCT
T ss_pred             HHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhh-----------CCEEEEEEcCCc
Confidence               44     5888888 9999999999999999888753      78888888753           457888888989


Q ss_pred             CCCCCCChHHHHHHHHHc------CcEEEEEcCcccccc---cCCCCccccccCCCCCCccEEEecCccccc-C-cccEE
Q psy15447        229 NSADICPLKDILSLRSKY------QARIFVDESVSFGTL---GSTGHGVTEYFGVSTEEVDMIIGSLEHALG-S-VGGFC  297 (457)
Q Consensus       229 ~~G~i~~l~~i~~l~~~~------g~~li~DEa~~~g~~---g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~-~gG~v  297 (457)
                      ++|.+.|+++|.++|++|      |+++++|++|+.+..   .....     +.....++|+++.+.+|.+. + ..|++
T Consensus       199 ~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~hK~~~~~~~~G~~  273 (452)
T 2dgk_A          199 YTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV-----WDFRLPRVKSISASGHKFGLAPLGCGWV  273 (452)
T ss_dssp             TTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC-----CSTTSTTEEEEEEETTTTTCCCSSCEEE
T ss_pred             CCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch-----hhcCCCCCcEEEECcccccCCCCCeEEE
Confidence            999999999999999996      999999999987643   21111     11222467999999999763 2 34787


Q ss_pred             EecH-HHH-HHHHhhCCcce------e--cCCCcHHHHHHHHHHHHHHh--hCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        298 VGSS-YII-EHHRLSGSGYC------F--SASLPPFLAVAANKALHLLK--ANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       298 ~~~~-~~~-~~~~~~~~~~~------~--~~~~~~~~~aaa~a~l~~~~--~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      +.++ ..+ +.+... ..|.      +  ..+.+.....+..++++.+.  ...++.++..++++++.+.|++   .+++
T Consensus       274 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~---~~~~  349 (452)
T 2dgk_A          274 IWRDEEALPQELVFN-VDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAK---LGPY  349 (452)
T ss_dssp             EESSGGGSCGGGCEE-ECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---TSSE
T ss_pred             EEcCHHHHHHHhccC-ccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---CCCe
Confidence            7754 332 332111 1111      1  11212112222223333332  1245678888999999999988   4578


Q ss_pred             EEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHH
Q psy15447        366 LVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLI  441 (457)
Q Consensus       366 ~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~  441 (457)
                      ++..+    +..+++.+.++.....   .....++.+.|.++|+.++....|..  ......+|+++...+|++|+++++
T Consensus       350 ~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~l~~~L~~~Gi~v~~~~~~~~--~~~~~~lRis~~~~~t~e~id~li  424 (452)
T 2dgk_A          350 EFICTGRPDEGIPAVCFKLKDGEDP---GYTLYDLSERLRLRGWQVPAFTLGGE--ATDIVVMRIMCRRGFEMDFAELLL  424 (452)
T ss_dssp             EEEEECCTTTBSSEEEEEECTTCCC---SCCHHHHHHHHHHTTCBCCEEECSTT--CTTCEEEEEECCTTCCHHHHHHHH
T ss_pred             EEecCCCCCCCeEEEEEEecCcccc---cCCHHHHHHHHHhcCCeeeeeeCCcc--cCCeEEEEEEecCCCCHHHHHHHH
Confidence            87644    3567788877642100   00235789999999997654322211  123468999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy15447        442 ETLCKSHDIAV  452 (457)
Q Consensus       442 ~~l~~~~~~~~  452 (457)
                      ++|+++++.+.
T Consensus       425 ~~l~~~~~~~~  435 (452)
T 2dgk_A          425 EDYKASLKYLS  435 (452)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999887664

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.93  E-value=1.5e-24  Score=218.09  Aligned_cols=289  Identities=13%  Similarity=0.160  Sum_probs=205.2

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHH
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHL  199 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~l  199 (457)
                      .+...++++++++++|.+.++++++|++|+..++. ++++||.|++..+.|.++...    +...|.++..++.+|++++
T Consensus       132 ~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l  210 (464)
T 1ibj_A          132 NPTRDALESLLAKLDKADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEV  210 (464)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHH
Confidence            45789999999999999999999999999988875 789999999999999887653    4566889999999999999


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCc
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV  279 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~  279 (457)
                      ++.++           +++++|++++++||+|.+.|+++|+++|++||+++|+||+|+.|...   .. .+ +     ++
T Consensus       211 ~~~i~-----------~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~---~~-~~-~-----~~  269 (464)
T 1ibj_A          211 AAAIG-----------PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLS---RP-LE-L-----GA  269 (464)
T ss_dssp             HHHCC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTC---CG-GG-T-----TC
T ss_pred             HHHhc-----------cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccC---Ch-hh-c-----CC
Confidence            88874           35689999999999999999999999999999999999999764321   11 11 2     35


Q ss_pred             cEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        280 DMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       280 Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      |+++.|++|++++    .+|+++++ +++++.++...  ..++.+.+++.++++.++++.+.   ...++..++...+.+
T Consensus       270 div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~--~~~g~~~~~~~~~a~~~al~~~~---~r~~~~~~~~~~l~~  344 (464)
T 1ibj_A          270 DIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIAM  344 (464)
T ss_dssp             SEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHH--HHTTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred             EEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHH--HhcCCCCCHHHHHHHHhchhhHH---HHHHHHHHHHHHHHH
Confidence            8999999999964    34888888 47777765432  11233457888877777765332   123333333344434


Q ss_pred             Hhhcc-----------cccCCeEEeccC---CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEecccc------Cc
Q psy15447        355 LLSQH-----------KVTQRFLVQGHR---DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSH------LD  414 (457)
Q Consensus       355 ~L~~~-----------~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~  414 (457)
                      .|++.           ..++++.+..+.   .+.++++.+++..       ...++.+.|...||.++.+..      |.
T Consensus       345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~-------~~~~~~~~L~~~gi~v~~G~~~sl~~~p~  417 (464)
T 1ibj_A          345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA-------LSKHLVETTKYFSIAVSFGSVKSLISMPC  417 (464)
T ss_dssp             HHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHH-------HHHHHHHHCSSSEECSCCCSSSCEEECTT
T ss_pred             HHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHH-------HHHHHHHhcCcceEeecCCCCceeeeccc
Confidence            44331           112344443221   3568888874311       234577887777888776541      10


Q ss_pred             ------c------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        415 ------Q------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       415 ------~------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                            .      .....++.+|++++.    ||++++++.|+++++.
T Consensus       418 ~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~~  461 (464)
T 1ibj_A          418 FMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFKT  461 (464)
T ss_dssp             TTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHHS
T ss_pred             ccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHhh
Confidence                  0      001125789999986    8999999999998764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.3e-23  Score=212.92  Aligned_cols=305  Identities=13%  Similarity=0.141  Sum_probs=212.1

Q ss_pred             ChHHHHHHHHHHHhhcCCC------------cEEEecccHHHHHHHHHhhcC-------------------CCCEEEEeC
Q psy15447        123 TNVVHLDLENDIASFMGLE------------ETALYSFGFSTSASAIAAYVK-------------------RNDAVFVDE  171 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~------------~~i~~~sG~~a~~~ai~a~~~-------------------~gd~v~~~~  171 (457)
                      ..++..++.+.+++++|.+            ..+++++|++||..++.+.+.                   +++.|+++.
T Consensus       116 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~  195 (481)
T 4e1o_A          116 CTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASD  195 (481)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEET
T ss_pred             HHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcC
Confidence            3445555555667777765            347888999999988876532                   467899999


Q ss_pred             cccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc
Q psy15447        172 NINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY  246 (457)
Q Consensus       172 ~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~  246 (457)
                      ..|.++.+++++.|.+++.++.+     |+++|++.|++....     ...+.+|+.....+++|.+.|+++|.++|++|
T Consensus       196 ~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~-----g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~  270 (481)
T 4e1o_A          196 QAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQR-----GLVPVFVCATLGTTGVCAFDCLSELGPICARE  270 (481)
T ss_dssp             TSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred             cchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhC-----CCCcEEEEEecCCCCCcCcCCHHHHHHHHHHc
Confidence            99999999999999999988864     899999999764321     12246677888888999999999999999999


Q ss_pred             CcEEEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCc---ccEEEecHHHHHHHHhhCCcceec-----
Q psy15447        247 QARIFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGSSYIIEHHRLSGSGYCFS-----  317 (457)
Q Consensus       247 g~~li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~~~~~~~~~~~~~~~~~~-----  317 (457)
                      |+++++|++|+.+.+ ++..+..  ..|+  ..+|.++.+.||+++.+   |++++.++............|.+.     
T Consensus       271 ~~~lhvDaA~g~~~~~~~~~~~~--~~gi--~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~  346 (481)
T 4e1o_A          271 GLWLHIDAAYAGTAFLCPEFRGF--LKGI--EYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGV  346 (481)
T ss_dssp             TCEEEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTT
T ss_pred             CCeEEeehhhHHHHHhChhhHHH--hcCc--ccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCC
Confidence            999999999987643 2212211  1233  34589999999999743   234455555433211111112111     


Q ss_pred             ----------C--CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        318 ----------A--SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       318 ----------~--~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                                .  ....+.+.+++..+.. +..+++.++..++++++.+.|++   .+++++..++..+++++.+.... 
T Consensus       347 ~~~~~~~~~~~~r~~~~l~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~~~~~~~~~~v~f~~~~~~-  421 (481)
T 4e1o_A          347 ATDFMHWQIPLSRRFRSVKLWFVIRSFGV-KNLQAHVRHGTEMAKYFESLVRN---DPSFEIPAKRHLGLVVFRLKGPN-  421 (481)
T ss_dssp             SCCGGGGSSSSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT---CTTEECCSCCCSSEEEEEESSCH-
T ss_pred             CCCcccccccCCCCccHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHhc---CCCeEEecCCceeEEEEEeCCch-
Confidence                      1  1234444444444321 12245778889999999999998   57999876677888888876432 


Q ss_pred             hHHHHHHHHHHHHHHHHcCee-EeccccCccccCCCCCeEEEEecCC-CCHHHHHHHHHHHHHHHHHhc
Q psy15447        386 EVASKKLLQTICDMCIQAGFA-ITCPSHLDQEAKKQKPSIRITCNIS-HTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~~~lRi~~~~~-~t~edi~~~~~~l~~~~~~~~  452 (457)
                           ....++.++|.++|+. +.+..      ..+..++|+++... .|++||++++++|+++.+++.
T Consensus       422 -----~~~~~l~~~L~~~g~~~~~~~~------~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~  479 (481)
T 4e1o_A          422 -----SLTENVLKEIAKAGRLFLIPAT------IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL  479 (481)
T ss_dssp             -----HHHHHHHHHHHHHCSSBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHhCCeEEEEeeE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                 1456889999999844 33322      22346899997644 489999999999999988764

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.93  E-value=1.7e-24  Score=213.77  Aligned_cols=250  Identities=12%  Similarity=0.110  Sum_probs=188.9

Q ss_pred             HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHH----------HHHhcCCeEEEe
Q psy15447        126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQT----------GLIASRCKVQYF  191 (457)
Q Consensus       126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~----------~~~~~g~~~~~~  191 (457)
                      .+.+|++.+|+++|.+.+++   ++||++|+..++.+++++||.|+++. +.|..+..          .++..|.++..+
T Consensus        60 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v  139 (409)
T 3jzl_A           60 GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV  139 (409)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe
Confidence            47889999999999999888   88999999999999999999999997 77777664          334568888888


Q ss_pred             cC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccccc
Q psy15447        192 KH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFGT  260 (457)
Q Consensus       192 ~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~  260 (457)
                      +.     .|++++++.++           +++++|++++    ++|++|.+.++++|.++|++  ||+++|+||+|+.+.
T Consensus       140 ~~~~~g~~d~e~l~~ai~-----------~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~  208 (409)
T 3jzl_A          140 PLLENGDVDFPRIAKKMT-----------PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFV  208 (409)
T ss_dssp             CCCTTSCCCHHHHHHHCC-----------TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTT
T ss_pred             CCCCCCCcCHHHHHHhcc-----------CCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccc
Confidence            87     68999988874           3568999999    99999999999999999999  999999999998665


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--CcceecCCCcHHHHHHHHHHHHH
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      ++...        . ..++|++++|++|++|+    .||++++++++++.++...  .......+..+..+.+++..++.
T Consensus       209 ~~~~p--------~-~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~  279 (409)
T 3jzl_A          209 EYQEP--------P-EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFL  279 (409)
T ss_dssp             SSCCS--------G-GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH
T ss_pred             ccCCc--------c-ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhh
Confidence            32111        1 12458999999999974    3799999999999987632  21212222222112334444443


Q ss_pred             HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---Cee
Q psy15447        335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---GFA  406 (457)
Q Consensus       335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~  406 (457)
                      +   +.++++..+++.++.+.|++    .|+.+. +..++     ++.+.+++..       .+.++++.|++.   +.+
T Consensus       280 ~---~~r~~~~~~~a~~la~~L~~----~g~~v~-p~~~~~~~~~i~~i~l~~~~-------~~~~~~~~L~~~~~~~s~  344 (409)
T 3jzl_A          280 A---PHVTAQAIKGARFTAAMLAE----FGVEAD-PVWDAPRTDLIQSVSFHNKE-------KMVAFAQAIQAASPVNAH  344 (409)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSCCEEECSCHH-------HHHHHHHHHHHTSSSSTT
T ss_pred             H---HHHHHHHHHHHHHHHHHHHh----CCCccc-CCCCCCCccEEEEEEeCCHH-------HHHHHHHHHHhcCccccc
Confidence            3   45788899999999999998    566663 33444     7888887543       677899999987   444


Q ss_pred             Eecc
Q psy15447        407 ITCP  410 (457)
Q Consensus       407 v~~~  410 (457)
                      +.|.
T Consensus       345 ~~p~  348 (409)
T 3jzl_A          345 VLPI  348 (409)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            4443

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.93  E-value=3.5e-24  Score=212.18  Aligned_cols=255  Identities=14%  Similarity=0.165  Sum_probs=192.6

Q ss_pred             HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHH-----------HHHhcCCeEEE
Q psy15447        126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQT-----------GLIASRCKVQY  190 (457)
Q Consensus       126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~-----------~~~~~g~~~~~  190 (457)
                      .+.+|++.+|+++|.+.+++   ++||++|+..++.+++++||.|+++. +.|..+..           .+...|.++..
T Consensus        74 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~  153 (427)
T 3i16_A           74 GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQ  153 (427)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEE
T ss_pred             HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEE
Confidence            47889999999999998888   89999999999999999999999998 77765542           33456888888


Q ss_pred             ecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCcccc
Q psy15447        191 FKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFG  259 (457)
Q Consensus       191 ~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g  259 (457)
                      ++.     .|++++++.+++.         +++++|++++    ++|++|.+.++++|+++|++  ||+++++|++|+.+
T Consensus       154 v~~~~~g~~D~e~l~~~l~~~---------~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~  224 (427)
T 3i16_A          154 VDLKEDGKPNLEEIEKVLKED---------ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF  224 (427)
T ss_dssp             CCCCTTSSCCHHHHHHHHHTC---------TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred             ecCccCCCcCHHHHHHHhhCC---------CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccc
Confidence            887     5899999998741         2468999999    99999999999999999999  99999999999876


Q ss_pred             cccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcH-HH-HHHHHHHHH
Q psy15447        260 TLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPP-FL-AVAANKALH  333 (457)
Q Consensus       260 ~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~aaa~a~l~  333 (457)
                      .+..  ..      . ..++|++++|++|++|+    .||++++++++++.++.......++....| +. +..++..++
T Consensus       225 ~~~~--~p------~-~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~  295 (427)
T 3i16_A          225 MDTK--EP------T-DVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLF  295 (427)
T ss_dssp             SSSS--CG------G-GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH
T ss_pred             cccC--Cc------c-ccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHH
Confidence            5322  11      1 12458999999999974    579999999999998763222222222222 22 344444444


Q ss_pred             HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---Ce
Q psy15447        334 LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---GF  405 (457)
Q Consensus       334 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---Gi  405 (457)
                      .+   +.++++..+++.++.+.|++    .|+.+. +..++     ++.+.+++..       .+.++++.|...   +.
T Consensus       296 ~~---~~r~~~~~~~a~~la~~L~~----~g~~V~-p~~~~~~~~~i~~i~l~~~~-------~~~~f~~~l~~~~~~~s  360 (427)
T 3i16_A          296 LA---PHISMEALKGAILCSRIMEL----AGFEVM-PKYDEKRSDIIQSIKFNDKD-------KLIEFCKGIQTGSPIDS  360 (427)
T ss_dssp             HH---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSCEEEECSSHH-------HHHHHHHHHHHTCSSST
T ss_pred             HH---HHHHHHHHHHHHHHHHHHHh----CCCeec-CCCCCCCccEEEEEEECCHH-------HHHHHHHHHhhcCcccc
Confidence            33   45788999999999999998    566663 44555     8888887544       677899999886   55


Q ss_pred             eEeccccC
Q psy15447        406 AITCPSHL  413 (457)
Q Consensus       406 ~v~~~~~~  413 (457)
                      ++.|..++
T Consensus       361 ~~~p~~~~  368 (427)
T 3i16_A          361 FVSCEPWD  368 (427)
T ss_dssp             TSCCCCBC
T ss_pred             cccCcCCC
Confidence            55554443

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.93  E-value=1.9e-23  Score=205.10  Aligned_cols=319  Identities=12%  Similarity=0.082  Sum_probs=222.1

Q ss_pred             CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH-HhhcC-CCcEEEecccHHHHHHHHHhh-cCCCCEEE
Q psy15447         92 SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI-ASFMG-LEETALYSFGFSTSASAIAAY-VKRNDAVF  168 (457)
Q Consensus        92 ~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l-a~~~g-~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~  168 (457)
                      .+...+++.+++.+.++. +..       +...+...+|++++ |+++| .+.+++++||++|+..++.++ +++||.|+
T Consensus        11 ~~~~~~~i~~a~~~~~~~-~~~-------~~~~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi   82 (377)
T 3ju7_A           11 STVPVIEYLDELKEIDAS-HIY-------TNYGPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYAL   82 (377)
T ss_dssp             CCCCGGGGHHHHHHHHHH-TCC-------SSSCHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred             CCCCcHHHHHHHHHHHHc-CCc-------ccCCHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence            344568899999999876 221       11245678999999 99999 888999999999999999988 89999999


Q ss_pred             EeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHH
Q psy15447        169 VDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSL  242 (457)
Q Consensus       169 ~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l  242 (457)
                      ++.+.|.++...+...|.+++.++.+      |++++++.+....        .++++|+   +.+++|.+.++++|.++
T Consensus        83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~--------~~tk~v~---~~~~~G~~~~~~~i~~l  151 (377)
T 3ju7_A           83 MPSFTFPATPLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELK--------EEVAIVV---PYATFGSWMNLEEYEEL  151 (377)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHG--------GGEEEEC---CBCGGGBCCCCHHHHHH
T ss_pred             ECCCCcHHHHHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCC--------CCceEEE---EECCCCCccCHHHHHHH
Confidence            99999999999999999998887643      8999999884311        1256666   34578999999999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--cccccC-cccEEEe-cHHHHHHHHhhCC-c----
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALGS-VGGFCVG-SSYIIEHHRLSGS-G----  313 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg~-~gG~v~~-~~~~~~~~~~~~~-~----  313 (457)
                      |+ ||+++|+|++|++|.... +.    ..|-  ...|+.+.||  +|.+++ .||+++. ++++.+.++.... +    
T Consensus       152 a~-~~~~vi~D~a~a~g~~~~-~~----~~g~--~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~  223 (377)
T 3ju7_A          152 EK-KGVPVVVDAAPGFGLMNG-GM----HYGQ--DFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTN  223 (377)
T ss_dssp             HH-TTCCBEEECTTCTTCEET-TE----ETTT--TCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTT
T ss_pred             Hh-cCCEEEEECCCccCCeEC-CE----eccC--CCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCC
Confidence            99 999999999999875421 11    1110  0125666665  699964 4577665 5666666653221 1    


Q ss_pred             -----ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCe--EEeccC----CCCeEEEEecC
Q psy15447        314 -----YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF--LVQGHR----DTPLKYLYLQK  382 (457)
Q Consensus       314 -----~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~--~~~~~~----~~~~~~i~~~~  382 (457)
                           ..+...++++.++.+++.++.++   +..++.+++.+++.+.|+++   +++  .+....    ...++.+.+++
T Consensus       224 ~~~~~~g~~~~~~~~~aa~~~~~l~~l~---~~~~~~~~~~~~~~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (377)
T 3ju7_A          224 RECTMMGFNCKMSEYAAAIGIATMKKWD---DKLKERTRISEWYKQLLQSN---GLMKKGWQLQKTEAVIQQFMPILCPE  297 (377)
T ss_dssp             SCBCSSCCBCCCCHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHHHHT---TTTTTTCBCCCCSCBCCSSEEEECCT
T ss_pred             CceeeccccCCCCHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCC---CCccccccCCCCCcceEEEEEEEeCC
Confidence                 12334578888888888776554   36778888888888888873   221  111111    11234455544


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccC-ccccC--C-------------CCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHL-DQEAK--K-------------QKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~-~~~~~--~-------------~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      ..       ...++.+.|.++||.++....+ ....+  .             ....+|+.++..+|++|+++++++|++
T Consensus       298 ~~-------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~  370 (377)
T 3ju7_A          298 EV-------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQ  370 (377)
T ss_dssp             TS-------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred             hh-------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence            22       2567999999999998765422 11000  0             134799999999999999999999987


Q ss_pred             HHHH
Q psy15447        447 SHDI  450 (457)
Q Consensus       447 ~~~~  450 (457)
                      ++..
T Consensus       371 ~~~~  374 (377)
T 3ju7_A          371 KVVS  374 (377)
T ss_dssp             ----
T ss_pred             HHhc
Confidence            7654

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.93  E-value=2.8e-23  Score=210.00  Aligned_cols=304  Identities=10%  Similarity=0.044  Sum_probs=207.3

Q ss_pred             hHHHHHHHHHHHhhcCCC-----------cEEEecccHHHHHHHHHhhcC-------------------CCCEEEEeCcc
Q psy15447        124 NVVHLDLENDIASFMGLE-----------ETALYSFGFSTSASAIAAYVK-------------------RNDAVFVDENI  173 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~-----------~~i~~~sG~~a~~~ai~a~~~-------------------~gd~v~~~~~~  173 (457)
                      .++..++.+.+++++|.+           ..+++++|++||..++.+.+.                   +++.|+++...
T Consensus       112 ~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~  191 (475)
T 3k40_A          112 TELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQA  191 (475)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTS
T ss_pred             HHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCc
Confidence            344444445567777866           368889999999988876531                   24689999999


Q ss_pred             cHHHHHHHHhcCCeEEEecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        174 NFAIQTGLIASRCKVQYFKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       174 h~~~~~~~~~~g~~~~~~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      |.++.+++++.|.+++.++.    .|+++|++.|++....     ...+.+|++....+++|.+.|+++|.++|++||++
T Consensus       192 H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~-----~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~  266 (475)
T 3k40_A          192 HSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAE-----GLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLW  266 (475)
T ss_dssp             CHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCE
T ss_pred             hHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHC-----CCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCe
Confidence            99999999999999998887    4899999999864321     12245677777788899999999999999999999


Q ss_pred             EEEEcCcccccc-cCCCCccccccCCCCCCccEEEecCcccccCc--ccEE-EecHHHH-HHHHhhCCcce---------
Q psy15447        250 IFVDESVSFGTL-GSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFC-VGSSYII-EHHRLSGSGYC---------  315 (457)
Q Consensus       250 li~DEa~~~g~~-g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v-~~~~~~~-~~~~~~~~~~~---------  315 (457)
                      +++|++|+.+.+ ++..+..  ..++  ..+|.++.+.||+++.+  .|++ +.++... +.+.. ...|.         
T Consensus       267 lhvD~A~~~~~~~~~~~~~~--~~gi--~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~~  341 (475)
T 3k40_A          267 IHVDAAYAGSAFICPEYRHL--MKGI--ESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNV-DPLYLKHDMQGSAP  341 (475)
T ss_dssp             EEEECTTGGGGGGSGGGGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESSGGGC---------------------
T ss_pred             EEEeHHhHHHHHhCHhhHHH--hcCc--ccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcC-CccccCCCcCCCCC
Confidence            999999987643 2211111  1233  24689999999999643  2444 4444332 22211 11111         


Q ss_pred             ------ecCC--CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchH
Q psy15447        316 ------FSAS--LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEV  387 (457)
Q Consensus       316 ------~~~~--~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  387 (457)
                            ...+  ...+.+.+++..+.. +..+++.++..++++++.+.|++   .+++++..++..+++++.+....   
T Consensus       342 ~~~~~~~~~sr~~~~l~l~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~l~~~~~~~iv~f~~~~~~---  414 (475)
T 3k40_A          342 DYRHWQIPLGRRFRALKLWFVLRLYGV-ENLQAHIRRHCNFAKQFGDLCVA---DSRFELAAEINMGLVCFRLKGSN---  414 (475)
T ss_dssp             -------CCCGGGTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---STTEEESSCCBTTEEEEEESSCH---
T ss_pred             CcccccccCCCcccHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEecCCceEEEEEEeCCch---
Confidence                  1111  122333333333321 12245778899999999999998   57999876677888888876432   


Q ss_pred             HHHHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEecC-CCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        388 ASKKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITCNI-SHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       388 ~~~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~~~-~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                         ....++.++|.++|..+ .+..      ..+..++|+++.. .+|++||++++++|+++.+++..
T Consensus       415 ---~~~~~l~~~L~~~g~~~~~~~~------~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~  473 (475)
T 3k40_A          415 ---ERNEALLKRINGRGHIHLVPAK------IKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ  473 (475)
T ss_dssp             ---HHHHHHHHHHHHHTSCBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHHHHhCCcEEEEeeE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence               14568899999988643 3322      2335689999764 45899999999999999887654

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.93  E-value=3.3e-23  Score=211.38  Aligned_cols=311  Identities=14%  Similarity=0.149  Sum_probs=211.7

Q ss_pred             hHHHHHHHHHHHhhcCCC----cEEEecccHHHHHHHHHhhcC--------CC-----C-EEEEeCcccHHHHHHHHhcC
Q psy15447        124 NVVHLDLENDIASFMGLE----ETALYSFGFSTSASAIAAYVK--------RN-----D-AVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~ai~a~~~--------~g-----d-~v~~~~~~h~~~~~~~~~~g  185 (457)
                      .+...++.+.+++++|.+    ..+++++|++|+..++.++..        +|     + .|+++...|.++..++...|
T Consensus       131 ~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g  210 (504)
T 2okj_A          131 VLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALG  210 (504)
T ss_dssp             HHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcC
Confidence            344556667778988865    467888999999999887742        45     6 78889999999999988877


Q ss_pred             C---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcc
Q psy15447        186 C---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVS  257 (457)
Q Consensus       186 ~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~  257 (457)
                      .   +++.++.+     |+++|++.+++....     ..++++|+++.+++++|.+.|+++|.++|++||+++++|++|+
T Consensus       211 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-----g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~  285 (504)
T 2okj_A          211 FGTDNVILIKCNERGKIIPADFEAKILEAKQK-----GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWG  285 (504)
T ss_dssp             SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred             CCcccEEEEecCCCCCCCHHHHHHHHHHHHHC-----CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhh
Confidence            6   78888765     899999999763221     1246788899999999999999999999999999999999998


Q ss_pred             cccccCCCCccccccCCCCCCccEEEecCcccccCc--ccEEEecH-HHHHHHHhhCCcceecC----------------
Q psy15447        258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSS-YIIEHHRLSGSGYCFSA----------------  318 (457)
Q Consensus       258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~-~~~~~~~~~~~~~~~~~----------------  318 (457)
                      .+.+..... .....++  .++|+++.++||+++.+  .|+++.++ ++++.......++.++.                
T Consensus       286 ~~~~~~~~~-~~~~~g~--~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  362 (504)
T 2okj_A          286 GGLLMSRKH-RHKLNGI--ERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQ  362 (504)
T ss_dssp             GGGGGCTTT-GGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSC
T ss_pred             hHHHhCHhh-HhhcCCc--ccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCC
Confidence            776532110 0111223  25689999999999732  47777665 45554322222232211                


Q ss_pred             ---CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCCeEEEEecCCc------chH
Q psy15447        319 ---SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTPLKYLYLQKSD------DEV  387 (457)
Q Consensus       319 ---~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~i~~~~~~------~~~  387 (457)
                         ...++.++++++++.. +...++.++..++++++.+.|++   .+++++..  ++...++.+......      ..+
T Consensus       363 ~~rr~~~l~~~a~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~---~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~  438 (504)
T 2okj_A          363 CGRHVDIFKFWLMWKAKGT-VGFENQINKCLELAEYLYAKIKN---REEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQ  438 (504)
T ss_dssp             SSCBCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTT---CTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHH
T ss_pred             CCCCccHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEEecCCCCeEEEEEEEeCccccccccchh
Confidence               1135555555555542 22245678888999999999988   57888875  345556666542210      000


Q ss_pred             HH---HHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        388 AS---KKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       388 ~~---~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..   .....++.+.|.++|+.+ .+..+     ....+++|+++. ..+|++||++++++|+++.+++
T Consensus       439 ~~~~~~~~~~~l~~~L~~~G~~~~~~~~~-----~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  502 (504)
T 2okj_A          439 RREKLHKVAPKIKALMMESGTTMVGYQPQ-----GDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL  502 (504)
T ss_dssp             HHHHHTTHHHHHHHHHHHHTSCEEEEEEE-----TTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             hHHHHHHHHHHHHHHHHhCCcEEEEeeEE-----CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            00   012457888999999643 32221     111258999995 8899999999999999887543

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.93  E-value=6e-24  Score=210.48  Aligned_cols=245  Identities=14%  Similarity=0.145  Sum_probs=187.6

Q ss_pred             HHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHH-----------HHHHhcCCeEEE
Q psy15447        126 VHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQ-----------TGLIASRCKVQY  190 (457)
Q Consensus       126 ~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~-----------~~~~~~g~~~~~  190 (457)
                      -..+|++++|+++|.+.+++   ++||++|+..++.+++++||.|+++. +.|....           ..++..|.++..
T Consensus        75 g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~  154 (427)
T 3hvy_A           75 GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKM  154 (427)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEE
T ss_pred             hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEE
Confidence            47889999999999999988   89999999999999999999999997 7776544           234456888888


Q ss_pred             ecC----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccccc
Q psy15447        191 FKH----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSFGT  260 (457)
Q Consensus       191 ~~~----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~g~  260 (457)
                      ++.    .|++++++.+++.         +++++|++++    ++|++|.+.++++|+++|++  ||+++++|++|+.+.
T Consensus       155 v~~~~~~~d~e~l~~~i~~~---------~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~  225 (427)
T 3hvy_A          155 VDLKDGKVDINTVKEELKKD---------DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFV  225 (427)
T ss_dssp             CCCBTTBCCHHHHHHHHHHC---------TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTT
T ss_pred             ecCCCCCcCHHHHHHHhhCC---------CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccc
Confidence            887    7999999999741         2568999999    99999999999999999999  899999999998765


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC----cccEEEecHHHHHHHHhhC--CcceecCCCcHHHHHHHHHHHHH
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSG--SGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      ++..  .      + ..++|++++|++|++|+    .||++++++++++.++...  .+.....+.++..+..++..++.
T Consensus       226 ~~~~--p------~-~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~  296 (427)
T 3hvy_A          226 EEKE--P------T-DVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFM  296 (427)
T ss_dssp             SSSC--G------G-GGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHH
T ss_pred             cCCC--C------c-ccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhH
Confidence            3321  1      1 12458999999999974    5799999999999987632  22222222222223444444443


Q ss_pred             HhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc
Q psy15447        335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA  403 (457)
Q Consensus       335 ~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~  403 (457)
                      +   +.++++..+++.++.+.|++    .|+.+. +..++     ++.+.+++..       .+.++++.|...
T Consensus       297 ~---~~r~~~~~~~a~~la~~L~~----~g~~V~-p~~~~~~~~li~~~~l~~~~-------~~~~f~~~l~~~  355 (427)
T 3hvy_A          297 A---PHVTIEAVKGAVFCARIMEL----AGFDVL-PKYNDKRTDIIQAIKFNDEK-------KLIDFIKGIQTA  355 (427)
T ss_dssp             H---HHHHHHHHHHHHHHHHHHHH----TTCEEE-SCTTSCCSSSEEEEECSSHH-------HHHHHHHHHHHT
T ss_pred             H---HHHHHHHHHHHHHHHHHHHh----CCCeec-CCCCCCCceEEEEEeCCCHH-------HHHHHHHHhccc
Confidence            3   35788899999999999998    566663 43444     8888887543       677899998875

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.92  E-value=1.3e-23  Score=220.31  Aligned_cols=316  Identities=13%  Similarity=0.040  Sum_probs=209.4

Q ss_pred             cChHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHH-HHhcCCeEEEecC------
Q psy15447        122 GTNVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTG-LIASRCKVQYFKH------  193 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~-~~~~g~~~~~~~~------  193 (457)
                      +....+.++++.+|+++|.+.++++++|+ +++..++.+++++||.|+++.++|.+...+ +.++|++++.++.      
T Consensus       170 ~~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~~  249 (730)
T 1c4k_A          170 IHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYG  249 (730)
T ss_dssp             TTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTTC
T ss_pred             CChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCccccC
Confidence            44567899999999999999888888876 899999999999999999999999999988 8889988776542      


Q ss_pred             ----CCHHHH-----HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccC
Q psy15447        194 ----NNMQHL-----EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGS  263 (457)
Q Consensus       194 ----~d~~~l-----e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~  263 (457)
                          .|++++     ++++++......+. ....++++++++ +++|.+.|+++|.++|++||+++|+||+|+.+. +++
T Consensus       250 i~g~id~e~L~~~~le~~i~~~~~~~~~t-~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~  327 (730)
T 1c4k_A          250 FIGGIYDSDFDEKKIRELAAKVDPERAKW-KRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIP  327 (730)
T ss_dssp             CEEEECGGGSCHHHHHHHTTTSSHHHHTC-SCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSG
T ss_pred             ccCCCCHHHHhhhHHHHHhhcCCcccccc-cCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCc
Confidence                277777     66665420000000 011155555555 478999999999999999999999999997542 332


Q ss_pred             CCCcc--c--cccCCCCCCccEEEecCcccccCc--ccEEEecHHH-------H--HHHHhhCCcceecCCCcHHHHHHH
Q psy15447        264 TGHGV--T--EYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSSYI-------I--EHHRLSGSGYCFSASLPPFLAVAA  328 (457)
Q Consensus       264 ~g~~~--~--~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~aaa  328 (457)
                      .+++.  .  +.++.+ +..++++.|+||++++.  ||++..++..       +  ..+.... ....++++++...++.
T Consensus       328 ~~~g~~~l~~~~~g~D-~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~-~~~~stsp~~~~iaal  405 (730)
T 1c4k_A          328 MMRNSSPLLIDDLGPE-DPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSF-NLFMSTSPFYPMYAAL  405 (730)
T ss_dssp             GGGGGCTTSCCCCCTT-SCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHHH-HHHSCSSCCHHHHHHH
T ss_pred             ccCCcCcccccccCCC-CCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccCHHHHHHHH-HHhCCCCCcHHHHHHH
Confidence            21111  1  112321 11129999999999753  4566433221       1  1121111 1223455677776776


Q ss_pred             HHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC-----------------------------------
Q psy15447        329 NKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR-----------------------------------  371 (457)
Q Consensus       329 ~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~-----------------------------------  371 (457)
                      .++++.+..  ..++++++.++.+++++.|++.  ++|+.+..+.                                   
T Consensus       406 ~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~--i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  483 (730)
T 1c4k_A          406 DVNAAMQEGEAGRKLWHDLLITTIEARKKLIKA--GSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG  483 (730)
T ss_dssp             HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHT--TCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhh--CCCeEEccccccccccccccccccccccchhhccCccchhccccc
Confidence            677776654  3557788999999999999761  2455553221                                   


Q ss_pred             --CC-----Ce-EEEEecCC--cch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447        372 --DT-----PL-KYLYLQKS--DDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       372 --~~-----~~-~~i~~~~~--~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~  439 (457)
                        .+     |+ +.+..++.  ...  ......+..+.+.|+++||.+....         ...+|++++..+|++++++
T Consensus       484 ~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~---------~~~ir~~~s~g~t~e~i~~  554 (730)
T 1c4k_A          484 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD---------LNSILFLMTPAETPAKMNN  554 (730)
T ss_dssp             CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC---------SSEEEEECCTTCCHHHHHH
T ss_pred             cCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECC---------CCeEEEEeCCCCCHHHHHH
Confidence              11     11 33333210  000  0000135678899999999886432         4789999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q psy15447        440 LIETLCKSHDIAV  452 (457)
Q Consensus       440 ~~~~l~~~~~~~~  452 (457)
                      ++++|+++.+...
T Consensus       555 Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          555 LITQLLQLQRLIE  567 (730)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999877653

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.92  E-value=2.5e-22  Score=205.38  Aligned_cols=313  Identities=12%  Similarity=0.086  Sum_probs=211.2

Q ss_pred             cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc-------C-CCC------EEEEeCcccHHHHHHHHhcC
Q psy15447        122 GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV-------K-RND------AVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       122 g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~-------~-~gd------~v~~~~~~h~~~~~~~~~~g  185 (457)
                      +..+...++.+.+++++|.+  ..+++++|++|+..++.++.       + +|+      .|+++...|.++..+++..|
T Consensus       145 ~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g  224 (515)
T 2jis_A          145 VFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLG  224 (515)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcC
Confidence            34566677888899999975  56888899999999988763       2 465      88999999999999998888


Q ss_pred             C---eEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcc
Q psy15447        186 C---KVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVS  257 (457)
Q Consensus       186 ~---~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~  257 (457)
                      .   +++.++.+     |+++|++.+++....     ..++++|+++.+++++|.+.|+++|.++|++||+++|+|++|+
T Consensus       225 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~-----g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~  299 (515)
T 2jis_A          225 LGTDSVRVVKADERGKMVPEDLERQIGMAEAE-----GAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWG  299 (515)
T ss_dssp             SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred             CCCCcEEEEecCCCCcCCHHHHHHHHHHHHhC-----CCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhh
Confidence            7   78887754     799999999763211     1246788999999999999999999999999999999999998


Q ss_pred             cccccCCCCccccccCCCCCCccEEEecCcccccC-c-ccEEEecHH--HHHHHHhhCCcceec----------------
Q psy15447        258 FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-V-GGFCVGSSY--IIEHHRLSGSGYCFS----------------  317 (457)
Q Consensus       258 ~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~-gG~v~~~~~--~~~~~~~~~~~~~~~----------------  317 (457)
                      .+.+.... ......++  .++|+++.+++|++++ . .|+++.++.  +++.......++.++                
T Consensus       300 ~~~~~~~~-~~~~~~g~--~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  376 (515)
T 2jis_A          300 GSVLLSQT-HRHLLDGI--QRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVV  376 (515)
T ss_dssp             GGGGGCTT-TGGGGTTG--GGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCS
T ss_pred             hHHHhChh-hHhhcCCC--ccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCC
Confidence            77653211 00112233  2568999999999963 3 377777655  555421111111110                


Q ss_pred             ---CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC------cchHH
Q psy15447        318 ---ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS------DDEVA  388 (457)
Q Consensus       318 ---~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~  388 (457)
                         .....+...++++++.. +...++.++..++++++.+.|++   .+++++..++....+.+.....      ...+.
T Consensus       377 ~~~rr~~al~~~~~l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~---~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~  452 (515)
T 2jis_A          377 QCGRRVDCLKLWLMWKAQGD-QGLERRIDQAFVLARYLVEEMKK---REGFELVMEPEFVNVCFWFVPPSLRGKQESPDY  452 (515)
T ss_dssp             CSSCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT---STTEEESSCCSSSEEEEEECCGGGTTCTTSTTH
T ss_pred             CCCCcccHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCEEEeCCCCeeEEEEEEeCccccccccchhH
Confidence               01124444444444432 12235778888999999999988   5789887655555666654211      00000


Q ss_pred             HH---HHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHH
Q psy15447        389 SK---KLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       389 ~~---~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..   .....+.+.|.++|+.+......    ....+++|+++ +..+|++|+++++++|++++++
T Consensus       453 ~~~l~~~~~~l~~~l~~~G~~~~~~~~~----~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~  514 (515)
T 2jis_A          453 HERLSKVAPVLKERMVKEGSMMIGYQPH----GTRGNFFRVVVANSALTCADMDFLLNELERLGQD  514 (515)
T ss_dssp             HHHHHTHHHHHHHHHHHHTSCEEEEEEE----TTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhcCCEEEEEEEE----CCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence            00   01234778888899765321100    11136899999 8999999999999999987653

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.92  E-value=2.3e-23  Score=216.70  Aligned_cols=306  Identities=11%  Similarity=0.076  Sum_probs=212.3

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------  194 (457)
                      ...+.++++++|+++|.+.++++++|+ .||..++.+++++||.|++++++|.++..++.++|+++++++..        
T Consensus       194 ~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~gi~~  273 (715)
T 3n75_A          194 SGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG  273 (715)
T ss_dssp             BTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTTCCBC
T ss_pred             cHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccccccccc
Confidence            456789999999999999999999885 89999999999999999999999999999999999998877631        


Q ss_pred             -------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCC
Q psy15447        195 -------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGH  266 (457)
Q Consensus       195 -------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~  266 (457)
                             |++++++++++...      ....+++++.++ |++|.+.|+++|.++|++++  +++||||+.+. +++.+.
T Consensus       274 ~i~~~~~d~e~Le~~l~~~~~------~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~  344 (715)
T 3n75_A          274 GIPQSEFQHATIAKRVKETPN------ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE  344 (715)
T ss_dssp             CCCGGGGSHHHHHHHHHHSTT------CCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred             CcccccCCHHHHHHHHhhCcC------ccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccc
Confidence                   79999999986421      011124555444 78999999999999998774  79999998664 343222


Q ss_pred             ccccccCCCC-CCccEE---EecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--C
Q psy15447        267 GVTEYFGVST-EEVDMI---IGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--N  338 (457)
Q Consensus       267 ~~~~~~~~~~-~~~Di~---~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~  338 (457)
                      +..   .+.. +.+|++   ++|+||++++  .||++..++++.....+......+++++++..+|+..+++++++.  .
T Consensus       345 ~~~---al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g  421 (715)
T 3n75_A          345 GKC---GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAG  421 (715)
T ss_dssp             TSS---TTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHH
T ss_pred             ccc---ccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhcc
Confidence            111   1110 123544   8999999976  468887765432222222223456777888888888889988863  4


Q ss_pred             cHHHHHHHHHHHHHHHHhhccccc-CC--eEEeccCC-----------------------C-----Ce-EEEEecCC-cc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVT-QR--FLVQGHRD-----------------------T-----PL-KYLYLQKS-DD  385 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~-~~--~~~~~~~~-----------------------~-----~~-~~i~~~~~-~~  385 (457)
                      +++++++.++.+++++.|+++... .+  +.+..+..                       .     |+ +.+..++- .+
T Consensus       422 ~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~  501 (715)
T 3n75_A          422 KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKD  501 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCC
Confidence            568899999999999999873210 01  22221110                       0     11 12222210 00


Q ss_pred             h--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        386 E--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       386 ~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .  ......+..+.+.|.++||.+-...         .+.+-+.++...|++++++++++|.++.+.
T Consensus       502 G~~~~~Gi~g~~~~~~L~~~~I~~E~~d---------~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~  559 (715)
T 3n75_A          502 GTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLFLFSIGIDKTKALSLLRALTDFKRA  559 (715)
T ss_dssp             SCBCSSCCCHHHHHHHHHHTTCCCSEEE---------TTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CccccCCCcHHHHHHHHHHCCCEEEecC---------CCcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence            0  0000134567888888999875443         357778888889999999999999887654

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.91  E-value=9.4e-22  Score=199.78  Aligned_cols=305  Identities=11%  Similarity=0.043  Sum_probs=207.8

Q ss_pred             hHHHHHHHHHHHhhcCCCc-----------EEEecccHHHHHHHHHhhcCC---------C---------C-EEEEeCcc
Q psy15447        124 NVVHLDLENDIASFMGLEE-----------TALYSFGFSTSASAIAAYVKR---------N---------D-AVFVDENI  173 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~~~ai~a~~~~---------g---------d-~v~~~~~~  173 (457)
                      .+...++.+.+++++|.+.           .+++++|++|+..++.+...+         |         + .|+++...
T Consensus       112 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~  191 (486)
T 1js3_A          112 TELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQA  191 (486)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTC
T ss_pred             HHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCC
Confidence            4455556667788888663           578899999999888765321         3         3 47889999


Q ss_pred             cHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        174 NFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       174 h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      |.++..+++..|.+++.++.+     |+++|++.+++....     .....+|++..+++++|.+.|+++|.++|++||+
T Consensus       192 h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~-----g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~  266 (486)
T 1js3_A          192 HSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAA-----GLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDI  266 (486)
T ss_dssp             CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhC-----CCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            999999999999999888763     799999999764310     0123477788888999999999999999999999


Q ss_pred             EEEEEcCccccccc-CCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHH-H-HHHHHhhCCcce--------
Q psy15447        249 RIFVDESVSFGTLG-STGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSY-I-IEHHRLSGSGYC--------  315 (457)
Q Consensus       249 ~li~DEa~~~g~~g-~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~-~-~~~~~~~~~~~~--------  315 (457)
                      ++++|++|+.+.+. +..+..  ..++  .++|+++.+.||+++.  ..|+++.++. . .+.+.. ...|.        
T Consensus       267 ~lhvD~a~g~~~~~~~~~~~~--~~g~--~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~-~~~yl~~~~~~~~  341 (486)
T 1js3_A          267 WLHVDAAYAGSAFICPEFRHL--LNGV--EFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKL-DPVYLKHSHQGSG  341 (486)
T ss_dssp             EEEEECTTGGGGGGSTTTGGG--GTTG--GGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC-------------CC
T ss_pred             EEEEehhhHHHHHHCHHHHHH--hcCc--cccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcC-CchhhCCCccccc
Confidence            99999999876542 112221  1233  2568889999999974  3477766543 2 232210 00111        


Q ss_pred             -----------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc
Q psy15447        316 -----------FSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD  384 (457)
Q Consensus       316 -----------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~  384 (457)
                                 .+.....+.+.+++..+.. +...++.++..++++++.+.|++   .+++++..++..+++.+.+....
T Consensus       342 ~~~~~~~~~~~~~rr~~~~~~~~al~~~g~-~g~~~~~~~~~~~a~~l~~~L~~---~~~~~~~~~~~~~~v~f~~~~~~  417 (486)
T 1js3_A          342 LITDYRHWQLPLGRRFRSLKMWFVFRMYGV-KGLQAYIRKHVQLSHEFEAFVLQ---DPRFEVCAEVTLGLVCFRLKGSD  417 (486)
T ss_dssp             SCCCGGGSSSCSCCCCTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH---CTTEEECSCCCSSEEEEEESSCH
T ss_pred             CCCCccccCCCCCCchhHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHhc---CCCeEEeCCCceeEEEEEecChH
Confidence                       0111233444444443321 12245678888999999999988   57898875566778877775421


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeE-eccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v-~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                            ....++.+.|.++|+.+ .+..      ..+.+++|+++ +..+|++|+++++++|+++++++.+.
T Consensus       418 ------~~~~~l~~~L~~~g~~~~~~~~------~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~  477 (486)
T 1js3_A          418 ------GLNEALLERINSARKIHLVPCR------LRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAA  477 (486)
T ss_dssp             ------HHHHHHHHHHHHHTSCBCEEEE------ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ------HHHHHHHHHHHhcCCEEEEEEE------ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                  13467889999888653 2221      12356899997 55578999999999999998876543

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.91  E-value=2.7e-23  Score=208.48  Aligned_cols=281  Identities=12%  Similarity=0.111  Sum_probs=195.4

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEec-ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--C-----
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYS-FGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--N-----  194 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~-sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--~-----  194 (457)
                      ......++++.+++ +|.++.++++ +|++|+..++.+++++||.|+++.++|.++..++...|.+++.++.  +     
T Consensus        55 ~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~  133 (446)
T 2x3l_A           55 PEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETHQSPLTNH  133 (446)
T ss_dssp             CSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTTTSS
T ss_pred             cchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccccCc
Confidence            34567899999999 9987666555 4568999999999999999999999999999999999988877664  3     


Q ss_pred             ----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        195 ----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       195 ----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                          |++++   +   .        +++++|++++ .|++|.+.|+++|+++|++||+++|+||+|+. .++..+. ...
T Consensus       134 ~~~~d~~~l---~---~--------~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~-~~~  196 (446)
T 2x3l_A          134 YNKVNLSRL---N---N--------DGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGF-PDS  196 (446)
T ss_dssp             EEEEEC---------------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTS-CCC
T ss_pred             CCCCCHHHH---c---C--------CCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCC-CCC
Confidence                23444   1   1        2456777777 55699999999999999999999999999985 2221121 111


Q ss_pred             ccCCCCCCccEEEecCccccc-C-cccEEEecHHHHH--HHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC-cH-HHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALG-S-VGGFCVGSSYIIE--HHRLSGSGYCFSASLPPFLAVAANKALHLLKAN-PS-LLTK  344 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg-~-~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~~-~~~~  344 (457)
                      ...   .++|+++.|+||+++ + .+|++++++++++  .+..... ...+++.+...+++..++++.++.. .+ +.++
T Consensus       197 ~~~---~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~-~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~  272 (446)
T 2x3l_A          197 TLN---YQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLS-YFQTSSPSYLIMASLESAAQFYKTYDSTLFFAK  272 (446)
T ss_dssp             GGG---GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHH-HHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred             hHH---cCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            111   124899999999774 3 3588888776644  2222111 1123345666666666677777654 23 6667


Q ss_pred             HHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeE
Q psy15447        345 LREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSI  424 (457)
Q Consensus       345 l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~l  424 (457)
                      .+++.+++++.        ++.+..+.....+++.+.. .       ...++.+.|.++||.+....         .+++
T Consensus       273 ~~~l~~~l~~~--------g~~~~~~~~~~~l~i~~~~-~-------~~~~l~~~L~~~GI~v~~~g---------~~~i  327 (446)
T 2x3l_A          273 RAQLIECLENK--------GFEMLQVDDPLKLLIKYEG-F-------TGHDIQNWFMNAHIYLELAD---------DYQA  327 (446)
T ss_dssp             HHHHHHHHHHH--------TCEEEECSSTTEEEEECTT-S-------CHHHHHHHHHHTTEEESEEC---------SSCE
T ss_pred             HHHHHHHHHHc--------CCEECcCCCCeEEEEEeCC-c-------CHHHHHHHHHHCCCEEEecC---------CCEE
Confidence            77777776664        4555433333456666652 2       34578899999999986221         3689


Q ss_pred             EEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        425 RITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       425 Ri~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |++++..+|++|+ +++++|+++++..
T Consensus       328 Ri~~~~~~t~e~i-~l~~aL~~~~~~~  353 (446)
T 2x3l_A          328 LAILPLWHHDDTY-LFDSLLRKIEDMI  353 (446)
T ss_dssp             EEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred             EEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence            9999998999999 9999999987654

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.91  E-value=7.1e-23  Score=202.34  Aligned_cols=329  Identities=11%  Similarity=-0.004  Sum_probs=209.0

Q ss_pred             eeeEEeecCCccCC----CCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----Cc--EEEecc
Q psy15447         80 IPCINFATHNYLSF----VENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EE--TALYSF  148 (457)
Q Consensus        80 ~~~id~~s~~~l~~----~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~--~i~~~s  148 (457)
                      ...|||+-+.|...    ...+.+++|.. .+ +.-+.  .++....|..++.+.+++.+.+..+.    +.  ++++++
T Consensus        29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G  105 (405)
T 3k7y_A           29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKE--KPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIG  105 (405)
T ss_dssp             SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCC--CCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEH
T ss_pred             cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCC--CCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCc
Confidence            35789987655332    22466777765 33 22111  12222345666666665555443332    22  366777


Q ss_pred             cHHHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        149 GFSTSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       149 G~~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      |++|+..++.+++.  + |.|++..++|..+...++..|.+++.++.       .|++++++.+++.         ++++
T Consensus       106 ~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~---------~~~~  175 (405)
T 3k7y_A          106 GTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI---------PNGS  175 (405)
T ss_dssp             HHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS---------CSSC
T ss_pred             hHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC---------CCCe
Confidence            88999999888887  8 99999999999999999999999888764       1688999888752         2345


Q ss_pred             EEEEec-CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC---ccccccCCCCCCccEEEecCcccccC
Q psy15447        220 FIIVEG-VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH---GVTEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       220 ~vi~e~-v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~---~~~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      ++++.+ .+||||.+.+   +++|.++|++||+++|+||+|....++....   ......... ++ .|+++||||++|.
T Consensus       176 ~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~-~~-~i~~~S~SK~~~l  253 (405)
T 3k7y_A          176 SVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN-IA-FSVCQSFSKNMSL  253 (405)
T ss_dssp             EEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT-CC-EEEEEECTTTSCC
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcC-Cc-EEEEeeCCccCCC
Confidence            666654 5899999998   6688899999999999999997544431100   111111111 22 4889999999986


Q ss_pred             cc---cEEE---ecHHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHh
Q psy15447        293 VG---GFCV---GSSYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       293 ~g---G~v~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L  356 (457)
                      +|   ||++   .++++++.+....   ....++ +.+.+..+++.++++.       .++...++++++++++.+.+.|
T Consensus       254 ~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L  332 (405)
T 3k7y_A          254 YGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYS-SPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKL  332 (405)
T ss_dssp             TTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceEEEEEeCCHHHHHHHHHHHHHHHhcccC-CCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66   8874   3566655442110   011222 2345554444444432       1122345677889999999999


Q ss_pred             h----cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        357 S----QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       357 ~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      +    ++..-.++++..+.++.++|+.+..            +++++|.++||++.+.           +  ||+++. .
T Consensus       333 ~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------------~~~~~L~~~gV~v~p~-----------~--Ris~a~-~  386 (405)
T 3k7y_A          333 ETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------------KIAEHLKTHHIYIINN-----------G--RINVSG-I  386 (405)
T ss_dssp             HHHGGGGTCCCCGGGGSSCCSSEEECGGGG------------GGTTTTTTTTEECCTT-----------S--EEEGGG-C
T ss_pred             HhhhhhcCCCCCCccccCCceEEEecCCCH------------HHHHHHHHCCEeecCC-----------C--eEEEec-c
Confidence            8    7211011344434556666654332            2345666779998752           1  898853 5


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~  450 (457)
                      ++++|++++++|+++++.
T Consensus       387 ~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          387 TKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             CTTHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHhh
Confidence            789999999999998764

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.91  E-value=4.8e-24  Score=210.51  Aligned_cols=274  Identities=12%  Similarity=0.105  Sum_probs=190.8

Q ss_pred             HHHHHHHHhhcC-------C-CcEEEecccHHHHHHHHHhhcCCCC----EEEEeCcccHHHHHHHHhcCCeEEEecCCC
Q psy15447        128 LDLENDIASFMG-------L-EETALYSFGFSTSASAIAAYVKRND----AVFVDENINFAIQTGLIASRCKVQYFKHNN  195 (457)
Q Consensus       128 ~~l~~~la~~~g-------~-~~~i~~~sG~~a~~~ai~a~~~~gd----~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d  195 (457)
                      .+|++.+|++++       . +.+++++++++++..++.+++++||    .|+++.++|..+...++..|.++..++.+ 
T Consensus        71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-  149 (391)
T 3bwn_A           71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGD-  149 (391)
T ss_dssp             HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEE-
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCC-
Confidence            677778887776       3 2456666667899999999999999    99999999999999999999888776642 


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccC
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      .+.++    .          +++++|++++++||+|.+.+  +|.+  ++|+  +++|+||+|..+   . ...+.    
T Consensus       150 ~~~l~----~----------~~~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~~ii~De~y~~~---~-~~~l~----  203 (391)
T 3bwn_A          150 AWGFD----K----------KGPYIELVTSPNNPDGTIRE--TVVN--RPDDDEAKVIHDFAYYWP---H-YTPIT----  203 (391)
T ss_dssp             STTCC----C----------CSCEEEEEESSCTTTCCCCC--CCC-------CCCEEEEECTTCST---T-TSCCC----
T ss_pred             HHHcC----C----------CCCEEEEECCCCCCCchhHH--HHHH--HhhcCCCEEEEeCCCCCC---C-CCccc----
Confidence            22222    1          24577878999999999986  4433  2255  999999998642   1 11111    


Q ss_pred             CCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh----------h-C
Q psy15447        274 VSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK----------A-N  338 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~----------~-~  338 (457)
                      .. .+.+|+++||||.+|++|   ||+++ ++++++.+......  ...+.+++...++.++++.-.          + .
T Consensus       204 ~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~  280 (391)
T 3bwn_A          204 RR-QDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIV--NSIGVSKESQVRTAKILNVLKETCKSESESENFF  280 (391)
T ss_dssp             CC-BCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHH
T ss_pred             cC-CCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcc--cccCCCHHHHHHHHHHHhCcchhccccccHHHHH
Confidence            11 234799999999998777   99986 88888877653321  123347777777777776431          1 2


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF  405 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi  405 (457)
                      ++.++.++++.+++.+.|++   .+++.+..+             ..+.++++.+....          .+.+.|.++||
T Consensus       281 ~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~~gV  347 (391)
T 3bwn_A          281 KYGREMMKNRWEKLREVVKE---SDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEET----------DLVSELRRHKV  347 (391)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---CSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSC----------CHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHh---CCCcccccCCccccccccccCCCcceEEEecCCcHH----------HHHHHHHHCCE
Confidence            35678888999999999988   346655322             23346777776432          35566778999


Q ss_pred             eEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        406 AITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       406 ~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .++++..+.    ...+++||++..  +++++++++++|+++++.
T Consensus       348 ~v~pg~~fg----~~~~~iRis~~~--~~e~i~~~~~~L~~~~~~  386 (391)
T 3bwn_A          348 MSRAGERCG----SDKKHVRVSMLS--REDVFNVFLERLANMKLI  386 (391)
T ss_dssp             ECEEGGGGT----CCTTEEEEESCS--CHHHHHHHHHHHHSCC--
T ss_pred             EEccCCCCC----CCCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence            999876542    235799999983  899999999999887654

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.91  E-value=5.3e-23  Score=203.58  Aligned_cols=285  Identities=10%  Similarity=0.023  Sum_probs=197.8

Q ss_pred             hHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH-HHHhc--CCeEEEecCCCH
Q psy15447        124 NVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDAVFVDENINFAIQT-GLIAS--RCKVQYFKHNNM  196 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~-~~~~~--g~~~~~~~~~d~  196 (457)
                      .+...++++++++++|.+   .+++ +++|++|+..++.+++++| .+.+....|..... .....  |.++..++.++-
T Consensus        77 ~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~g  155 (398)
T 2fyf_A           77 KNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSDPG  155 (398)
T ss_dssp             HHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECCTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence            356788999999999975   4566 6788899999999998887 23335555643222 23343  666666654310


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      .....   +.        .+++++|++.+++|++|.+.|+++|.++   ||+++|+||+|+.|...         .++  
T Consensus       156 ~~~~~---~i--------~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~---------~~~--  210 (398)
T 2fyf_A          156 SAPEP---QT--------DPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLP---------VDI--  210 (398)
T ss_dssp             CCCCC---CC--------CTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSC---------CCG--
T ss_pred             CCCCc---cc--------cCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcc---------cCc--
Confidence            00000   11        1345788888999999999999888887   89999999999865321         111  


Q ss_pred             CCccEEEecCcccccCcc--cEEEecHHHHHHHHhhC--------------------CcceecCCCcHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSG--------------------SGYCFSASLPPFLAVAANKALHL  334 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~aaa~a~l~~  334 (457)
                      .++|+++.|++|++|+.|  |++++++++++.++...                    ....+ .+.+...++++.++++.
T Consensus       211 ~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~t~~~~~~~a~~~al~~  289 (398)
T 2fyf_A          211 AETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTY-NTPAIATLALLAEQIDW  289 (398)
T ss_dssp             GGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCS-SCCCHHHHHHHHHHHHH
T ss_pred             ccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCC-CCCCHHHHHHHHHHHHH
Confidence            235899999999998764  67888998887763210                    01122 23466666667777776


Q ss_pred             Hhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEec--c-CCCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE
Q psy15447        335 LKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--H-RDTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI  407 (457)
Q Consensus       335 ~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~-~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v  407 (457)
                      +.+   .++.+++.+++++++.+.|++   .+|+++..  + ..++ ++++.++...       ...++.+.|.++||.+
T Consensus       290 ~~~~g~~~~~~~~~~~~~~~l~~~L~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~gI~v  359 (398)
T 2fyf_A          290 LVGNGGLDWAVKRTADSSQRLYSWAQE---RPYTTPFVTDPGLRSQVVGTIDFVDDV-------DAGTVAKILRANGIVD  359 (398)
T ss_dssp             HHHHTSHHHHHHHHHHHHHHHHHHHHH---STTEEESCCSGGGBCSSEEEEEECTTS-------CHHHHHHHHHHTTCBC
T ss_pred             HHHccCHHHHHHHHHHHHHHHHHHHHH---cCCceeccCChhhcCCcEEEEECCCCC-------CHHHHHHHHHHCCcEE
Confidence            543   245778899999999999988   45887753  2 1345 7888875433       3467899999999998


Q ss_pred             eccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        408 TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       408 ~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +++..     ..+.+++|++++..+|++|+++++++|++++++
T Consensus       360 ~~g~~-----~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          360 TEPYR-----KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER  397 (398)
T ss_dssp             CSCCT-----TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             ecCcc-----cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            76421     122478999999889999999999999988764

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.91  E-value=1.5e-22  Score=214.21  Aligned_cols=313  Identities=14%  Similarity=0.118  Sum_probs=210.0

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEEecccH-HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC--------
Q psy15447        124 NVVHLDLENDIASFMGLEETALYSFGF-STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN--------  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~~~sG~-~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~--------  194 (457)
                      .....++++.+++++|.+..+++++|+ +|+..++.+++++||.|+++.++|.++..++...|++++.++..        
T Consensus       204 ~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~g~~g  283 (755)
T 2vyc_A          204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIG  283 (755)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTTSCBC
T ss_pred             ccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcccccc
Confidence            456788999999999999888887775 78999999999999999999999999999999999988876531        


Q ss_pred             -------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccc-ccCCCC
Q psy15447        195 -------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGT-LGSTGH  266 (457)
Q Consensus       195 -------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~-~g~~g~  266 (457)
                             |++++++++++........ ..++++++++++ +++|.+.|+++|.++|++||+++++||+|+.+. ++..++
T Consensus       284 ~i~~~~~d~e~le~~i~~~~~~k~~~-~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~  361 (755)
T 2vyc_A          284 PIYPQEMQPETLQKKISESPLTKDKA-GQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYA  361 (755)
T ss_dssp             CCCGGGGSHHHHHHHHHHCTTTGGGT-TCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGT
T ss_pred             ccCcCCCCHHHHHHHHHhCccccccc-cCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccC
Confidence                   8999999997531100000 012235555555 579999999999999999999999999997542 222111


Q ss_pred             ccccccC--CC-CCCccEEEecCcccccCc--ccEEEecHH--HH--HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh
Q psy15447        267 GVTEYFG--VS-TEEVDMIIGSLEHALGSV--GGFCVGSSY--II--EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA  337 (457)
Q Consensus       267 ~~~~~~~--~~-~~~~Di~~~s~sK~lg~~--gG~v~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~  337 (457)
                      +.....+  .+ .+..+|++.|+||++++.  ||++..++.  .+  ..+.... ....+++++....++..++++.+..
T Consensus       362 ~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~-~~~~s~sp~~~~iaal~aA~~~l~~  440 (755)
T 2vyc_A          362 DHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY-MMHATTSPLYAICASNDVAVSMMDG  440 (755)
T ss_dssp             TSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHH-HHTSCSSCCHHHHHHHHHHHHHHST
T ss_pred             CcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHh
Confidence            1111122  11 122345899999999753  567766543  11  1222111 1122345677777777778887754


Q ss_pred             C--cHHHHHHHHHHHHHHHHhhcccccCC---------eEEeccC-----------------------------------
Q psy15447        338 N--PSLLTKLREKCNTMHSLLSQHKVTQR---------FLVQGHR-----------------------------------  371 (457)
Q Consensus       338 ~--~~~~~~l~~~~~~l~~~L~~~~~~~~---------~~~~~~~-----------------------------------  371 (457)
                      .  .++++++.++.+++++.|+++   .+         +.+.++.                                   
T Consensus       441 ~gg~~~~~~~~~~a~~~r~~L~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (755)
T 2vyc_A          441 NSGLSLTQEVIDEAVDFRQAMARL---YKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGES  517 (755)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhc---cccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccc
Confidence            2  467888999999999999873   33         3332211                                   


Q ss_pred             --------C------CCeEEEEecC-Ccch--HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447        372 --------D------TPLKYLYLQK-SDDE--VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       372 --------~------~~~~~i~~~~-~~~~--~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~  434 (457)
                              .      ...+.+.++. ....  +.....+..+.+.|.++||.+....         .+.+|++++...|+
T Consensus       518 ~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~---------~~~v~~~~~~g~t~  588 (755)
T 2vyc_A          518 WHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQIMFLFSMGVTR  588 (755)
T ss_dssp             TTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEEC---------SSEEEEECCTTCCT
T ss_pred             cccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecC---------CCeEEEEECCCCCH
Confidence                    1      1233444432 0000  0000133578888988998875322         47899999999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q psy15447        435 QDMNSLIETLCKSHDIA  451 (457)
Q Consensus       435 edi~~~~~~l~~~~~~~  451 (457)
                      +++++++++|.++.+..
T Consensus       589 ~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          589 GKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             TTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999987644

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=5.1e-23  Score=204.78  Aligned_cols=254  Identities=13%  Similarity=0.136  Sum_probs=184.2

Q ss_pred             hHHHHHHHHHHHhhcCCCcEEE---ecccHHHHHHHHHhhcCCCCEEEEeC-cccHHHHHHHHh----------cCCeEE
Q psy15447        124 NVVHLDLENDIASFMGLEETAL---YSFGFSTSASAIAAYVKRNDAVFVDE-NINFAIQTGLIA----------SRCKVQ  189 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~~i~---~~sG~~a~~~ai~a~~~~gd~v~~~~-~~h~~~~~~~~~----------~g~~~~  189 (457)
                      .....++++.+++++|.+.+.+   ++||++|+..++.+++++||.|++.. +.|..+...+.+          .|.++.
T Consensus        64 ~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~  143 (431)
T 3ht4_A           64 DIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN  143 (431)
T ss_dssp             CHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred             hhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence            3557889999999999988766   78999999999999999999999988 888888766543          578888


Q ss_pred             EecC-----CCHHHHHHHHHhhchhcccCCCCccEEEEEec----CCCCCCCCCChHHHHHHHHH--cCcEEEEEcCccc
Q psy15447        190 YFKH-----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEG----VYMNSADICPLKDILSLRSK--YQARIFVDESVSF  258 (457)
Q Consensus       190 ~~~~-----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~----v~~~~G~i~~l~~i~~l~~~--~g~~li~DEa~~~  258 (457)
                      .++.     .|++++++.+++           ++++|++++    +.+++|.+.++++|+++|++  ||+++|+||+|+.
T Consensus       144 ~v~~~~~~~~d~e~l~~~l~~-----------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~  212 (431)
T 3ht4_A          144 AVPLTEGGLVDFEAVAAAIHS-----------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGE  212 (431)
T ss_dssp             ECCBCTTSSBCHHHHHHHCCT-----------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred             EeCCCCCCCcCHHHHHhhcCC-----------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChh
Confidence            8887     389999988753           467888885    44555666679999999999  9999999999987


Q ss_pred             ccccCCCCccccccCCCCCCccEEEecCccccc----CcccEEEecHHHHHHHHhhCCc--ceecCCCcHHHHHHHHHHH
Q psy15447        259 GTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG----SVGGFCVGSSYIIEHHRLSGSG--YCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       259 g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg----~~gG~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aaa~a~l  332 (457)
                      +..+.  ...  .+     ++|++++|++|++|    ..||++++++++++.++.....  .....+.++..+++++..+
T Consensus       213 ~~~~~--~~~--~~-----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l  283 (431)
T 3ht4_A          213 FIEEQ--EPC--HV-----GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGF  283 (431)
T ss_dssp             TSSSC--CGG--GT-----TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHH
T ss_pred             hccCC--Ccc--cc-----CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHh
Confidence            65432  111  12     34899999999975    4589999999999988653222  1111112222234445555


Q ss_pred             HHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-----eEEEEecCCcchHHHHHHHHHHHHHHHHc---C
Q psy15447        333 HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-----LKYLYLQKSDDEVASKKLLQTICDMCIQA---G  404 (457)
Q Consensus       333 ~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~l~~~---G  404 (457)
                      +.+   +.++++..+++.++.+.|++    .|+.+. +....     ++.+.+++..       ...++++.|.+.   +
T Consensus       284 ~~~---~~~~~~~~~~a~~l~~~L~~----~g~~v~-p~~~~~~~~li~~i~l~~~~-------~~~~~~~~l~~~~~~~  348 (431)
T 3ht4_A          284 FLA---PHVAGQALKGAIFTAAFLEK----LGMNTS-PAWNAPRTDLIQSVQFDDKD-------RMIAFCQAIQYASPIN  348 (431)
T ss_dssp             HHH---HHHHHHHHHHHHHHHHHHHH----HTCCEE-SCTTSCCSSSCCEEECCCHH-------HHHHHHHHHHHTSSSS
T ss_pred             hhH---HHHHHHHHHHHHHHHHHHHh----CcCEec-CCCCCCCccEEEEEEeCCHH-------HHHHHHHHHHhcCccc
Confidence            544   34678889999999999988    455542 22333     7778877543       677899999886   4


Q ss_pred             eeEecccc
Q psy15447        405 FAITCPSH  412 (457)
Q Consensus       405 i~v~~~~~  412 (457)
                      .++.|..+
T Consensus       349 ~~~~p~~~  356 (431)
T 3ht4_A          349 SHFTPYAN  356 (431)
T ss_dssp             TTSCCCCE
T ss_pred             cccCCCCC
Confidence            44444433

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.90  E-value=5.3e-22  Score=199.79  Aligned_cols=294  Identities=12%  Similarity=0.095  Sum_probs=199.6

Q ss_pred             hHHHHHHHHHHHhhcCCCc-EEEecccH-HHHHHHHHhhcC--CCCEEEEeCcccHHHHHHHHhcCCeEEEecC------
Q psy15447        124 NVVHLDLENDIASFMGLEE-TALYSFGF-STSASAIAAYVK--RNDAVFVDENINFAIQTGLIASRCKVQYFKH------  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~-~i~~~sG~-~a~~~ai~a~~~--~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~------  193 (457)
                      .+...++++++++++|.+. ++++++|+ .++..++.++..  +++.|++....|.++...++..|.++..++.      
T Consensus       132 ~~~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~  211 (456)
T 2z67_A          132 YALTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDR  211 (456)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTE
T ss_pred             HHHHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCC
Confidence            4566779999999999764 67777888 567666666543  6788888888999999999999998877653      


Q ss_pred             --CCHHHHHHHH-HhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        194 --NNMQHLEELL-RQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       194 --~d~~~le~~l-~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                        .|++++++.+ +...       ..++.+|++..+++++|.+.|+++|.++|++||+++++||+|+....|.... ...
T Consensus       212 ~~~d~~~l~~~i~~~~~-------~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~-~~~  283 (456)
T 2z67_A          212 VYVPVEDIENAIKKEIE-------LGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEK-LKK  283 (456)
T ss_dssp             EECCHHHHHHHHHHHHH-------TTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHH
T ss_pred             CCcCHHHHHHHHHHHhh-------CCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHH-HHH
Confidence              3899999999 4211       0245677788888899999999999999999999999999987544321000 000


Q ss_pred             ccCCCCCCccEEEecCccccc-C-cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALG-S-VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKL  345 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg-~-~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l  345 (457)
                      .+  . .++|+++.|++|+++ + .+|+++. ++++++.+.....+   ..+.++  ..++.+++..+..  .++..++.
T Consensus       284 ~~--~-~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g---~~~~~~--~~~~~aal~~l~~~~~~~~~~~~  355 (456)
T 2z67_A          284 AF--K-YRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPG---RASATP--VVNTLVSLLSMGSKNYLELVKNQ  355 (456)
T ss_dssp             HH--T-SCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCS---CBCSHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hh--C-CCCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCC---CCCCCH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence            11  1 145899999999864 3 3588888 57777776432221   112232  2223333333322  24567888


Q ss_pred             HHHHHHHHHHhhcccccC---CeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCe---eEe------ccccC
Q psy15447        346 REKCNTMHSLLSQHKVTQ---RFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AIT------CPSHL  413 (457)
Q Consensus       346 ~~~~~~l~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~v~------~~~~~  413 (457)
                      .++++++.+.|++   .+   |+.+..+ . +++++.+..+.       ...++.+.|.++|+   .+.      .+.++
T Consensus       356 ~~~~~~l~~~L~~---~~~~~g~~v~~~-~-~~v~~~~~~~~-------~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~  423 (456)
T 2z67_A          356 KNSKKLLDELLND---LSKKTGGKFLDV-E-SPIASCISVNS-------DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYL  423 (456)
T ss_dssp             HHHHHHHHHHHHH---HHHHSSCCBCCC-C-CSSEEEEECSS-------CHHHHHHHHHHTTEESCEEECTTCHHHHTCS
T ss_pred             HHHHHHHHHHHHh---cccccCCEecCC-C-CeEEEEEeccc-------HHHHHHHHHHHcCCCcceEEeecCccccccc
Confidence            9999999999988   33   6555433 3 66666663221       12468888999986   222      01111


Q ss_pred             ccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        414 DQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       414 ~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .   ....+++|++++..+|++|+|+++++|++++
T Consensus       424 ~---~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          424 G---TYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             S---CCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             c---ccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence            0   1124689999999999999999999998754

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.89  E-value=4.1e-21  Score=196.87  Aligned_cols=337  Identities=12%  Similarity=0.046  Sum_probs=208.5

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHH-HhhcC-------CCcEEEecccHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI-ASFMG-------LEETALYSFGFSTS  153 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l-a~~~g-------~~~~i~~~sG~~a~  153 (457)
                      ++||+.+.+ ++ +.|.+.+++.+.+..  ..   +....|..+..+++.+.+ .+..+       .+.+++++++++++
T Consensus       106 ~i~l~~g~~-~~-~~~~~~~al~~~~~~--~~---Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal  178 (546)
T 2zy4_A          106 SLSYVRDQL-GL-DPAAFLHEMVDGILG--CN---YPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAM  178 (546)
T ss_dssp             HHHHHHHTS-CC-CHHHHHHHHHHHHHT--CS---CCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHH
T ss_pred             hhecccCCC-CC-CChHHHHHHHHhhhc--CC---CCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHH
Confidence            677776554 44 357777777777642  11   222234455555554443 22221       13456666667898


Q ss_pred             HHHHHh-----hcCCCCEEEEeCcccHHHHHHHHhc--CCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccE
Q psy15447        154 ASAIAA-----YVKRNDAVFVDENINFAIQTGLIAS--RCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKK  219 (457)
Q Consensus       154 ~~ai~a-----~~~~gd~v~~~~~~h~~~~~~~~~~--g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~  219 (457)
                      ..++.+     ++++||.|++..++|..+.....+.  |.+++.++.       .|++++++.+.           .+++
T Consensus       179 ~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~k  247 (546)
T 2zy4_A          179 AYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD-----------PAIK  247 (546)
T ss_dssp             HHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-----------TTEE
T ss_pred             HHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-----------CCCe
Confidence            888877     5789999999999999888776554  467777653       36777766542           3457


Q ss_pred             EEEEecCCCCCCCCCC---hHHHHHHH--HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc
Q psy15447        220 FIIVEGVYMNSADICP---LKDILSLR--SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       220 ~vi~e~v~~~~G~i~~---l~~i~~l~--~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      +|++++++||+|.+.+   +++|.++|  ++||+++|+||+|+....+  ...+...   .+ +.+|++.||||.+|.+|
T Consensus       248 ~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~--~~s~~~~---~~-~~~i~~~S~SK~~g~~G  321 (546)
T 2zy4_A          248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD--FQSLFAI---CP-ENTLLVYSFSKYFGATG  321 (546)
T ss_dssp             EEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT--CCCHHHH---CG-GGEEEEEESTTTTTCGG
T ss_pred             EEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc--CcCHHHh---CC-CCEEEEEeCccccCCCC
Confidence            7777799999999998   56788998  7899999999999854332  2222221   12 34699999999998666


Q ss_pred             ---cEEEecHH-HHHHHHhhC------------Cc----------------------ceecCCCcHHHH-HHHHHH-HHH
Q psy15447        295 ---GFCVGSSY-IIEHHRLSG------------SG----------------------YCFSASLPPFLA-VAANKA-LHL  334 (457)
Q Consensus       295 ---G~v~~~~~-~~~~~~~~~------------~~----------------------~~~~~~~~~~~~-aaa~a~-l~~  334 (457)
                         ||++++++ +++.+....            ..                      ...+.+.+.+.. ++++.+ ...
T Consensus       322 lRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~al  401 (546)
T 2zy4_A          322 WRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFAL  401 (546)
T ss_dssp             GCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHH
T ss_pred             cceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHH
Confidence               99998875 766652110            00                      011122333333 322211 223


Q ss_pred             HhhC----cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCc----chHH-H----H-HHHHHHHHHH
Q psy15447        335 LKAN----PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSD----DEVA-S----K-KLLQTICDMC  400 (457)
Q Consensus       335 ~~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~-~----~-~~~~~~~~~l  400 (457)
                      +++.    .++++.++++.+.+.+.|..     ++.+..+..+.++++.+..-.    .... .    . .....+.+.+
T Consensus       402 l~~~~~~~~~~r~~~~~r~~~l~~~L~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll  476 (546)
T 2zy4_A          402 MDEADEYKHTLKQLIRRRETTLYRELGM-----PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIA  476 (546)
T ss_dssp             HCTTCHHHHHHHHHHHHHHHHHHGGGTS-----SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHHhcCC-----CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHH
Confidence            3322    23456666677777666632     233332345666677764200    0000 0    0 0123456677


Q ss_pred             HHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        401 IQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       401 ~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++||.+.++..+.    ...+++|+++. ..+++++++++++|++++++..
T Consensus       477 ~~~gV~v~pG~~F~----~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~  523 (546)
T 2zy4_A          477 DETGIVLLPGRGFG----SNRPSGRASLA-NLNEYEYAAIGRALRKMADELY  523 (546)
T ss_dssp             HHHSCCCEESSCTT----CSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCEEEeCccccC----CCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence            78899999887542    23578999997 4689999999999999887654

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.88  E-value=9.7e-21  Score=189.74  Aligned_cols=322  Identities=16%  Similarity=0.143  Sum_probs=202.0

Q ss_pred             eEEeecCCccCCCCChhhHHHHH---HHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcE--EEecccHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAI---DCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEET--ALYSFGFSTSASA  156 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~---~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~--i~~~sG~~a~~~a  156 (457)
                      ++++.+.++.+.. .|+..+++.   +.+..|  ++..+....|..+...++++.+++++|.+..  +++++|+.+++.+
T Consensus        65 ~~~~~~~g~~~~~-~p~~v~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~  141 (438)
T 1wyu_A           65 HKAFLGGGVRSHH-VPPVVQALAARGEFLTAY--TPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGV  141 (438)
T ss_dssp             TTCCCCSSCCCCC-CCHHHHHHHTSHHHHHCC--SCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHH
T ss_pred             cccccCCCccCCc-CcHHHHHHHhcchhhhcC--CCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHH
Confidence            4445444433332 455545443   232333  2211233456678899999999999998754  5666666443433


Q ss_pred             HHh-hcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCC-HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        157 IAA-YVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNN-MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       157 i~a-~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d-~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      +.+ ..++||.|+++.+.|.++...++    ..|.+++.++..+ .-++++ +   .        +++++|+++++ |++
T Consensus       142 ~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~-i---~--------~~t~~v~i~~p-n~t  208 (438)
T 1wyu_A          142 LLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPE-V---G--------EEVGAVVVQNP-NFL  208 (438)
T ss_dssp             HHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCC-C---C--------TTEEEEEEESS-CTT
T ss_pred             HHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCccCHHH-h---C--------CCeEEEEEECC-CCC
Confidence            332 24789999999999999886653    4788888887421 001111 2   1        35678888888 899


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcC-cccccccCCCCccccccCCCCCCccEEEecCccc------ccC-cccEEEecHH
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDES-VSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHA------LGS-VGGFCVGSSY  302 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa-~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~------lg~-~gG~v~~~~~  302 (457)
                      |.+.|+++|.++|++||+++|+|.. +++|.+..     ...+     ++|++++| +|.      +++ .+|+++++++
T Consensus       209 G~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~-----~~~~-----g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~  277 (438)
T 1wyu_A          209 GALEDLGPFAEAAHGAGALFVAVADPLSLGVLKP-----PGAY-----GADIAVGD-GQSLGLPMGFGGPHFGFLATKKA  277 (438)
T ss_dssp             SBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCC-----HHHH-----TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGG
T ss_pred             eEEecHHHHHHHHHHcCCEEEEEechhhccCcCC-----CccC-----CCCEEEEC-CcccCCCccCCCCCeeEEEEcHH
Confidence            9999999999999999999997743 55544321     1122     34788888 554      333 3489999988


Q ss_pred             HHHHHHhhC----------Cccee------------cCC--C---cHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHH
Q psy15447        303 IIEHHRLSG----------SGYCF------------SAS--L---PPFLAVAANKALHLLKA--NPSLLTKLREKCNTMH  353 (457)
Q Consensus       303 ~~~~~~~~~----------~~~~~------------~~~--~---~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~  353 (457)
                      +++.+....          ..+.+            .++  .   +.+.+.++...+..+..  .++..++.+++++++.
T Consensus       278 ~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~  357 (438)
T 1wyu_A          278 FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLH  357 (438)
T ss_dssp             GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence            766542110          00111            011  1   22222222122433322  2356778889999999


Q ss_pred             HHhhcccccCCeEEeccCC-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeE--eccccCccccCCCCCeEEEEecC
Q psy15447        354 SLLSQHKVTQRFLVQGHRD-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAI--TCPSHLDQEAKKQKPSIRITCNI  430 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v--~~~~~~~~~~~~~~~~lRi~~~~  430 (457)
                      +.|++   ++|+++..+.. ..++.+.++  .       ...+++++|.++||.+  .+..++      .++++|++++.
T Consensus       358 ~~L~~---~~g~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~L~~~gi~v~~~~~~~~------~~~~lRis~~~  419 (438)
T 1wyu_A          358 ALLLE---VPGVRPFTPKPFFNEFALALP--K-------DPEAVRRALAERGFHGATPVPREY------GENLALFAATE  419 (438)
T ss_dssp             HHHTT---STTCEECSCSSBCSEEEEECS--S-------CHHHHHHHHHHTTCCCCEECCTTS------CSSEEEEECCT
T ss_pred             HHHhc---CCCeEECCCCCeEEEEEEeCC--C-------CHHHHHHHHHHCCceecccccccc------CCCeEEEEecc
Confidence            99998   45888864321 222334332  2       3457999999999998  444321      25799999999


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q psy15447        431 SHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       431 ~~t~edi~~~~~~l~~~~  448 (457)
                      .+|++|+++++++|++++
T Consensus       420 ~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          420 LHEEEDLLALREALKEVL  437 (438)
T ss_dssp             TCCHHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHHHHHh
Confidence            999999999999998764

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.87  E-value=2.9e-21  Score=192.68  Aligned_cols=322  Identities=11%  Similarity=0.019  Sum_probs=215.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc-cChHHHHHHHHHHHhhcC--------CCcEEEecc
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY-GTNVVHLDLENDIASFMG--------LEETALYSF  148 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~-g~~~~~~~l~~~la~~~g--------~~~~i~~~s  148 (457)
                      +.+..+||..+.+ .+..++.+.+++.+.+...+....++.... | .....+|++.++++++        .+.++++++
T Consensus        54 ~~~~~i~l~~g~~-~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G  131 (427)
T 2hox_A           54 IQGCSADVASGDG-LFLEEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFGVG  131 (427)
T ss_dssp             CTTCCEECCSCCC-GGGHHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESH
T ss_pred             CCCceEEecCcCC-CCCCCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCC
Confidence            4556788877654 333345677777766643332211121112 3 1124567777777664        245677777


Q ss_pred             cHHHHHHHHHhh--------cCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        149 GFSTSASAIAAY--------VKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       149 G~~a~~~ai~a~--------~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      +++++..++.++        +++||.|+++.++|..+...++..|.++..+. .|+++|++.+.           +++++
T Consensus       132 ~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~-----------~~~k~  199 (427)
T 2hox_A          132 VTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWA-GNAANYVNVSN-----------PEQYI  199 (427)
T ss_dssp             HHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEE-EEGGGGTTCSC-----------GGGEE
T ss_pred             HHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeec-CCHHHHHHhhc-----------CCceE
Confidence            789999999999        89999999999999999999999888776654 36777766553           24567


Q ss_pred             EEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447        221 IIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       221 vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      |++.+++||+|.+.+ +    +++  ++..+.|+++-    .+ ...+   ..+. .+.||+++||||.+|.+|   ||+
T Consensus       200 v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~----~~-~~s~---~~~~-~~~~i~~~S~SK~~g~~G~RiG~~  263 (427)
T 2hox_A          200 EMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYY----WP-HYTP---IKYK-ADEDILLFTMSKFTGHSGSRFGWA  263 (427)
T ss_dssp             EEEESSCTTTCCCCC-C----SST--TCEEEEECTTC----ST-TTSC---CCSC-BCCSEEEEEHHHHTSCGGGCCEEE
T ss_pred             EEEcCCCCCcccccH-H----HHc--CCCEEEeeccc----CC-CCCc---cccC-CCceEEEEeChhcCCCCCceEEEE
Confidence            788899999999999 4    333  56788998752    11 1111   1222 345799999999998666   999


Q ss_pred             Ee-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---------C---cHHHHHHHHHHHHHHHHhhcccccCC
Q psy15447        298 VG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA---------N---PSLLTKLREKCNTMHSLLSQHKVTQR  364 (457)
Q Consensus       298 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---------~---~~~~~~l~~~~~~l~~~L~~~~~~~~  364 (457)
                      ++ ++++++.++.....  ...+.+++...++.++|+...+         .   .+.+++++++.+++.+.|++   .+|
T Consensus       264 ~~~~~~l~~~l~~~~~~--~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~g  338 (427)
T 2hox_A          264 LIKDESVYNNLLNYMTK--NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ---SDR  338 (427)
T ss_dssp             EECCHHHHHHHHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT---SSS
T ss_pred             EECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh---CcC
Confidence            98 58888887654321  1223466666666666654210         1   23567888899999999988   346


Q ss_pred             eEE--------------eccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEec
Q psy15447        365 FLV--------------QGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCN  429 (457)
Q Consensus       365 ~~~--------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~  429 (457)
                      +.+              ..+..+.++++.+..+         ..++++.|+ ++||.++++..+.    ...+++|+++.
T Consensus       339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~---------~~~~~~~ll~~~gI~v~pg~~f~----~~~~~~Ris~~  405 (427)
T 2hox_A          339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE---------EDKDCYQTFQNGRINTQNGVGFE----ASSRYVRLSLI  405 (427)
T ss_dssp             EECCCCCSCEEETTTTEEECCCCSEEEEEECSG---------GGCSHHHHHHHTTEECEEGGGGT----SCTTEEEEECS
T ss_pred             ccccccccccccccccccCCCCceEEEEECCCc---------HHHHHHHHHHHCCEEEcCCCccC----CCCCEEEEEec
Confidence            554              1233467788887642         124666765 7899999875431    13579999997


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~  449 (457)
                      .  ++++++++++.|+++++
T Consensus       406 ~--~~e~l~~~l~~l~~~~~  423 (427)
T 2hox_A          406 K--TQDDFDQLMYYLKDMVK  423 (427)
T ss_dssp             S--CHHHHHHHHHHHHHHHT
T ss_pred             C--CHHHHHHHHHHHHHHHh
Confidence            4  89999999999988763

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.86  E-value=2.8e-20  Score=183.92  Aligned_cols=338  Identities=12%  Similarity=0.019  Sum_probs=199.9

Q ss_pred             CCeeeEEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-Cc--EEEecccH
Q psy15447         78 NGIPCINFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-EE--TALYSFGF  150 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~~--~i~~~sG~  150 (457)
                      |+++-||++-+.|.+-.++    |.|++|..+.++. +... .+....|..++.+.+.+.+-.-... +.  .+-+.+|+
T Consensus        42 d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~-~~~~-~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggt  119 (420)
T 4h51_A           42 AKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM-NLDY-EYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGT  119 (420)
T ss_dssp             CCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT-TCCC-CCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHH
T ss_pred             CCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcC-CCCC-CCCCcCChHHHHHHHHHHhcCCCccccccceeeecCch
Confidence            3445678776655443333    4567776655544 2211 1223345555544444333111111 12  23456777


Q ss_pred             HHHHHHHH----hhcCCCCEEEEeCcccHHHHHHHHhcCCe-EEEecCC-------CHHHHHHHHHhhchhcccCCCCcc
Q psy15447        151 STSASAIA----AYVKRNDAVFVDENINFAIQTGLIASRCK-VQYFKHN-------NMQHLEELLRQQDERDTLNSKVTK  218 (457)
Q Consensus       151 ~a~~~ai~----a~~~~gd~v~~~~~~h~~~~~~~~~~g~~-~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~  218 (457)
                      .|+..++.    ++..+||.|+++.+++..+...++..|.+ +..+++.       |.+.+.+.++...        ++.
T Consensus       120 ga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~--------~~~  191 (420)
T 4h51_A          120 GAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAP--------DGS  191 (420)
T ss_dssp             HHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSC--------SSC
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccC--------CCc
Confidence            77665554    45679999999999999999889999875 4444322       6777777776543        566


Q ss_pred             EEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-ccccCCCCCCccEEEecCcccccCcc
Q psy15447        219 KFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-TEYFGVSTEEVDMIIGSLEHALGSVG  294 (457)
Q Consensus       219 ~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~~~~~~~~~~~Di~~~s~sK~lg~~g  294 (457)
                      ++++..+++||||...+   +++|.++|+++++++|.||+|....+|...... ......+....-+++.||||.++..|
T Consensus       192 ~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G  271 (420)
T 4h51_A          192 VFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYS  271 (420)
T ss_dssp             EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGG
T ss_pred             EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccccccc
Confidence            78888999999999988   779999999999999999998754444211100 00000000112478899999998766


Q ss_pred             ---cEEEecHHHHHHH-------HhhCCcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        295 ---GFCVGSSYIIEHH-------RLSGSGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       295 ---G~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                         |++++.....+..       .... ...++ +.+...+.++...+..       .++...++++++++++.+.+.|+
T Consensus       272 ~RvG~~~~~~~~~~~~~~~~~~l~~~~-r~~~s-~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~  349 (420)
T 4h51_A          272 ERAGTLSLLLKDKTKRADVKSVMDSLI-REEYT-CPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELL  349 (420)
T ss_dssp             GCEEEEEEECSCHHHHHHHHHHHHHHH-HTTTS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEecccCHHHHHHHHHHHHHhh-hcccC-cchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               8877653322221       1111 11222 2344444444333321       11223567788888999999998


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHH
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi  437 (457)
                      ++..-..+....++.|.+.++.+  ..          +.++.|.++||++.+.             -||+++. .+++.|
T Consensus       350 ~~g~~~~~~~i~~q~GmF~~~gl--s~----------e~v~~L~e~~Vy~~~~-------------gRis~Ag-l~~~ni  403 (420)
T 4h51_A          350 RLQTPGSWEHVINQIGMFSFLGL--SK----------AQCEYCQNHNIFITVS-------------GRANMAG-LTHETA  403 (420)
T ss_dssp             HTTCSSCCTHHHHCCSSEEECCC--CH----------HHHHHHHHTTEECCTT-------------CEEEGGG-CCHHHH
T ss_pred             HhCCCCCCCeecCCCceEEecCc--CH----------HHHHHHHhCCEEEcCC-------------CEEEecc-CCHHHH
Confidence            73211112222344565544322  21          2356788899987642             2888854 789999


Q ss_pred             HHHHHHHHHHHHHhcC
Q psy15447        438 NSLIETLCKSHDIAVQ  453 (457)
Q Consensus       438 ~~~~~~l~~~~~~~~~  453 (457)
                      ++++++|.++++++.+
T Consensus       404 ~~~a~aI~~vvr~i~r  419 (420)
T 4h51_A          404 LMLAQTINDAVRNVNR  419 (420)
T ss_dssp             HHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            9999999999987754

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.86  E-value=9.3e-21  Score=184.22  Aligned_cols=315  Identities=10%  Similarity=0.033  Sum_probs=205.8

Q ss_pred             CChhhHHHHHHHHHhcCC-CCCC---CCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCC--C
Q psy15447         95 ENPDIEKCAIDCIDKNGV-GSCG---PRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKR--N  164 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~-~~~~---~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~--g  164 (457)
                      -+++|.+++.+.+.++.- +.+.   +....-..+..++.++.++++++.+   +++|+ ++|++++..++..+..+  |
T Consensus        24 ~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~G  103 (377)
T 3e77_A           24 LPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAG  103 (377)
T ss_dssp             CCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTT
T ss_pred             CCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCC
Confidence            368899999988865432 1111   0000112467788899999999975   35664 58889999999888764  8


Q ss_pred             CEEEEeCcccHHHH--HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        165 DAVFVDENINFAIQ--TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       165 d~v~~~~~~h~~~~--~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      |.+++-...|.+..  ..++..|..+..++.+     ++++++..+           .+++++|.+.+..+.+|.+.|+ 
T Consensus       104 d~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i-----------~~~t~lV~~~h~et~tG~~~pi-  171 (377)
T 3e77_A          104 RCADYVVTGAWSAKAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNL-----------NPDASYVYYCANETVHGVEFDF-  171 (377)
T ss_dssp             CEEEECCCSHHHHHHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCC-----------CTTCSCEEEESEETTTTEECSS-
T ss_pred             CeEEEEECCHHHHHHHHHHHHhCCceEEeccCCCcCCCCChHHhcc-----------CCCccEEEEeCccCchheEchh-
Confidence            87765544443321  2233446555544432     334333222           1345677777777778999998 


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-------
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL-------  309 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~-------  309 (457)
                          +|+++|+++++|.++++|...           ++.++.|+++.|.+|++|+.| |+++.++++.+.+..       
T Consensus       172 ----i~~~~~~~~~vD~~q~~g~~~-----------id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~  236 (377)
T 3e77_A          172 ----IPDVKGAVLVCDMSSNFLSKP-----------VDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLE  236 (377)
T ss_dssp             ----CCCCTTCCEEEECTTTTTSSC-----------CCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGC
T ss_pred             ----hhccCCCEEEEEcccccCCCC-----------CchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhh
Confidence                588999999999999987542           222334567889999999766 777777665322211       


Q ss_pred             ----hCCcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEec-c--CCCC-eEEE
Q psy15447        310 ----SGSGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-H--RDTP-LKYL  378 (457)
Q Consensus       310 ----~~~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~--~~~~-~~~i  378 (457)
                          ......+ ++++....++..++++++.+.   +.+.++.+++.+++++.|++   ++|+.+.. +  ..++ ++.+
T Consensus       237 ~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~---~~g~~~~~~~~~~rs~~ivsf  312 (377)
T 3e77_A          237 YKVQAGNSSLY-NTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDN---SQGFYVCPVEPQNRSKMNIPF  312 (377)
T ss_dssp             HHHHHTTTTCS-SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT---STTSEECCSCGGGBCSSEEEE
T ss_pred             HHHHhhcCCCC-CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh---cCCceecCCCHHHcCCcEEEE
Confidence                0111112 244556666667888887654   56778899999999999998   45776432 1  2244 5777


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+++....   ......+.+.+.++||.++++..       ..+.+|+++...+|++|||+++++|+++.++
T Consensus       313 ~~~~~~~~---~~~~~~~l~~l~~~Gi~~~~g~~-------~~g~iRiS~~~~~t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          313 RIGNAKGD---DALEKRFLDKALELNMLSLKGHR-------SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             EESSTTCC---HHHHHHHHHHHHHTTEESCBCCT-------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EcCCCCCc---hhHHHHHHHHHHHCCcEEeCCCC-------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            77752100   00123577888889998866532       1356999999999999999999999998765

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.85  E-value=3.7e-19  Score=172.35  Aligned_cols=303  Identities=13%  Similarity=0.056  Sum_probs=202.8

Q ss_pred             ChhhHHHHHHHHHhcCC-CCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEE-ecccHHHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNGV-GSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETAL-YSFGFSTSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~-~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~-~~sG~~a~~~ai~a~~~~gd~  166 (457)
                      +|+|.+++.+.+..+.. +.+    +.+. .-..+..++.++.++++++.+   +++| +++|++++..++..+. ++|.
T Consensus        17 ~~~V~~a~~~~~~~~~~~~~s~~~~~hr~-~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~   94 (361)
T 3m5u_A           17 PLEILEQAQKELCDYQGRGYSIMEISHRT-KVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGV   94 (361)
T ss_dssp             CHHHHHHHHHTSSSGGGSSSCGGGSCSSS-HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSC
T ss_pred             cHHHHHHHHHHHHhcccCCceeeccCCCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCe
Confidence            58899999888765421 111    1111 112467788899999999974   4565 5788899999998888 6763


Q ss_pred             E--EE-eCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        167 V--FV-DENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       167 v--~~-~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      +  ++ ....|.+.. .++..|.++..++.+       +++. +  |.           +++++|.+.+..+.+|.+.|.
T Consensus        95 ~~~i~~~~~~~~~~~-~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~-----------~~t~lv~~~~~e~~tG~~~~~  159 (361)
T 3m5u_A           95 CEYANTGVWTKKAIK-EAQILGVNVKTVASSEESNFDHIPRV-E--FS-----------DNADYAYICSNNTIYGTQYQN  159 (361)
T ss_dssp             EEEEECSHHHHHHHH-HHHHTTCCEEEEEECTTTTSCSCCCC-C--CC-----------TTSSEEEEESEETTTTEECSS
T ss_pred             EEEEeCCHHHHHHHH-HHHHcCCceEEEecccCcCCCcCChh-h--cC-----------CCCCEEEEeCCCCCcceeCCc
Confidence            2  22 223343332 234456666655432       2333 2  21           345677777777778998662


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-hC---
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL-SG---  311 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~-~~---  311 (457)
                           +++ +|+++++|.++++|..           .++.+++|+++.|.+|++|+.| |+++.++++.+.+.. ..   
T Consensus       160 -----i~~-~~~~~~vD~~q~~g~~-----------~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~  222 (361)
T 3m5u_A          160 -----YPK-TKTPLIVDASSDFFSR-----------KVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSM  222 (361)
T ss_dssp             -----CCC-CSSCEEEECGGGTTSS-----------CCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGG
T ss_pred             -----ccc-cCCEEEEEcccccCCC-----------CCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCce
Confidence                 444 4999999999998754           2223457999999999999776 889999888776643 11   


Q ss_pred             --------CcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CC-CCeE
Q psy15447        312 --------SGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RD-TPLK  376 (457)
Q Consensus       312 --------~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~-~~~~  376 (457)
                              ....+ ++++.....+..++++++.+.   +.+.++.+++.+++++.|++   +.++ .+..+  .. ..++
T Consensus       223 ~~~~~~~~~~~~~-~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~---~~g~~~~~~~~~~rs~~iv  298 (361)
T 3m5u_A          223 LNYLTHAENQSLF-NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL---SNGFYKGHADKKDRSLMNV  298 (361)
T ss_dssp             GCHHHHHHTTTCS-SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT---STTSEEESSCGGGBCSSEE
T ss_pred             eehHHHhhcCCCC-CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH---CCCeeeccCCHHHcCCeEE
Confidence                    11111 244666666677889887654   45778899999999999988   3444 44322  12 3467


Q ss_pred             EEEecC-CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQK-SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       377 ~i~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+.+++ ..       ...++.+.|.++||.++.+...       .+.+|+++...+|++|||+++++|+++.++
T Consensus       299 sf~~~~~~~-------~~~~~~~~L~~~gI~~~~g~~~-------~g~iRiS~~~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          299 SFNIAKNKD-------LEPLFVKEAEEAGMIGLKGHRI-------LGGIRASIYNALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             EEEESSCTT-------HHHHHHHHHHHTTEECCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCchh-------hhHHHHHHHHHCCCEEecCCCc-------cCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence            777775 21       1136778888999998765431       256999999999999999999999998765

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.82  E-value=6e-20  Score=179.50  Aligned_cols=307  Identities=11%  Similarity=0.050  Sum_probs=191.6

Q ss_pred             ChhhHHHHHHHHHhcC-CCCC----CCCCcccChHHHHHHHHHHHhhcCCC---cEEEe-cccHHHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNG-VGSC----GPRGFYGTNVVHLDLENDIASFMGLE---ETALY-SFGFSTSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~-~~~~----~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG~~a~~~ai~a~~~~gd~  166 (457)
                      +|+|.+++.+.+.++. .+.+    +.+. .-..+..++.++.+++++|.+   +++|+ ++|++++..++..+.++||.
T Consensus        39 p~~V~~a~~~~~~~~~~n~~s~~~~~h~~-~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~  117 (386)
T 3qm2_A           39 PAEVLKLAQQELCDWHGLGTSVMEISHRG-KEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTT  117 (386)
T ss_dssp             CHHHHHHHTCC------------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCE
T ss_pred             CHHHHHHHHHHHHhccccCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCe
Confidence            5889998887776532 1111    0111 112456678899999999975   35663 68999999999999899997


Q ss_pred             EEEeCcccHHH--HHHHHhcCCeEEEecCC--------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCC-CC
Q psy15447        167 VFVDENINFAI--QTGLIASRCKVQYFKHN--------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADI-CP  235 (457)
Q Consensus       167 v~~~~~~h~~~--~~~~~~~g~~~~~~~~~--------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i-~~  235 (457)
                      +++-...|.+.  ...++..| .+..++.+        ++++++..+.           +++++|.+.+..+.+|.+ .|
T Consensus       118 v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~-----------~~t~lV~~~h~et~tG~~i~p  185 (386)
T 3qm2_A          118 ADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLS-----------DNAAYLHYCPNETIDGIAIDE  185 (386)
T ss_dssp             EEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCC-----------TTCSCEEECSEETTTTEECCC
T ss_pred             EEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcC-----------CCCcEEEEECCcCCcCEecCc
Confidence            65332222221  12233345 66555432        3344443332           345677777777788995 89


Q ss_pred             hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHh-----
Q psy15447        236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRL-----  309 (457)
Q Consensus       236 l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~-----  309 (457)
                      +++|.     +|+++++|.++++|...           ++.++.|+++.|.+|++|+.| |+++.++++.+.+..     
T Consensus       186 i~~i~-----~g~~~~vDa~qs~g~~p-----------idv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~  249 (386)
T 3qm2_A          186 TPDFG-----PEVVVTADFSSTILSAP-----------LDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSI  249 (386)
T ss_dssp             CCCCC-----TTCCEEEECTTTTTSSC-----------CCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGG
T ss_pred             hhhhc-----CCCEEEEEcccccCCCC-----------CCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcH
Confidence            88875     89999999999987542           222333566789999999776 788887765332111     


Q ss_pred             ------hCCcceecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhcccccCCe-EEecc--CCC-CeE
Q psy15447        310 ------SGSGYCFSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQHKVTQRF-LVQGH--RDT-PLK  376 (457)
Q Consensus       310 ------~~~~~~~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~-~~~~~--~~~-~~~  376 (457)
                            ...+..+. +.|....++..++++++.+.   +...++.+++.+++++.|++    .++ ....+  ..+ .++
T Consensus       250 ~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~----~~~~~~~~~~~~rs~~iv  324 (386)
T 3qm2_A          250 LDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDN----SDFYRNDVAQANRSRMNV  324 (386)
T ss_dssp             GCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHT----CSSEECCBCGGGBCSSEE
T ss_pred             HHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCHHHcCceEE
Confidence                  00111222 23444445556677766543   45778889999999999988    343 22111  223 467


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+.+++.. .     . ..+.+.|.++||.++.+..+       .+.+|+++...+|++|||+++++|+++.++
T Consensus       325 ~f~~~~~~-~-----~-~~~~~~L~~~gI~~~~g~~~-------~~~iRiS~~~~~t~edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          325 PFQLADNT-L-----D-KVFLEESFAAGLHALKGHRV-------VGGMRASIYNAMPIEGVKALTDFMIDFERR  384 (386)
T ss_dssp             EEEESSGG-G-----H-HHHHHHHHHTTEECCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCcc-c-----c-HHHHHHHHHCCCEEeCCCCC-------cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence            77776421 0     2 46777788999988765432       246999999999999999999999998765

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.82  E-value=2.9e-18  Score=165.37  Aligned_cols=326  Identities=11%  Similarity=0.069  Sum_probs=199.7

Q ss_pred             ChhhHHHHHHHHH-hcCCCCCCCCCcccC--hHHHHHHHH-HHHhhcCCCcE-----EEecccHHHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCID-KNGVGSCGPRGFYGT--NVVHLDLEN-DIASFMGLEET-----ALYSFGFSTSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~-~~~~~~~~~~~~~g~--~~~~~~l~~-~la~~~g~~~~-----i~~~sG~~a~~~ai~a~~~~gd~  166 (457)
                      +|.+.+|.-..+. +|.-++.+-|.+.|.  .+..+.|+. +..++||.+.+     +-..||+.||.+++.++++|||.
T Consensus        67 S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~  146 (490)
T 3ou5_A           67 SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDR  146 (490)
T ss_dssp             CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCC
T ss_pred             CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCE
Confidence            5788888766664 576677666665443  233344433 34458898754     55579999999999999999999


Q ss_pred             EEEeCcccHHHHH--------HHHhcCC--eEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        167 VFVDENINFAIQT--------GLIASRC--KVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       167 v~~~~~~h~~~~~--------~~~~~g~--~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      |+.-+..|+..+.        .+..+|.  +...++.      .|.+.+++..++.+          +++|++-...  .
T Consensus       147 ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~k----------PklIi~G~Sa--Y  214 (490)
T 3ou5_A          147 IMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR----------PRLIIAGTSA--Y  214 (490)
T ss_dssp             EECBC----------------------------CBCEETTTTEECHHHHHHHHHHHC----------CSEEEECCSS--C
T ss_pred             EEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcC----------CCeEEECCcc--C
Confidence            9987776655432        1222332  1222211      28999999888754          3577764322  2


Q ss_pred             CCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecH--------
Q psy15447        231 ADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSS--------  301 (457)
Q Consensus       231 G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~--------  301 (457)
                      -...|++++++||++.|++|++|-+|-.|..-. |. +..-  +  ...|++++|.||+| |+.||.+.+++        
T Consensus       215 ~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~-g~-~psP--~--~~ADvVTtTTHKTLrGPrGG~Il~~~~~~~~~~k  288 (490)
T 3ou5_A          215 ARLIDYARMREVCDEVKAHLLADMAHISGLVAA-KV-IPSP--F--KHADIVTTTTHKTLRGARSGLIFYRKGVKAVDPK  288 (490)
T ss_dssp             CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHT-TS-SCCG--G--GTCSEEEEESSSTTCSCSCEEEEEECSEEEECC-
T ss_pred             ccccCHHHHHHHHhhcccEEEechhhhhhhhcc-cc-cCCc--c--ccceEEeccccccccCCCceEEEecccccccccc
Confidence            345679999999999999999999997665421 11 1111  1  23599999999999 77899998775        


Q ss_pred             -------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CC
Q psy15447        302 -------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RD  372 (457)
Q Consensus       302 -------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~  372 (457)
                             ++.+.+...-.+...++......+|.+.+-.+.+.. ..+..+++.+|++.|.+.|.+    .|+.++.. .+
T Consensus       289 ~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~----~G~~vvsGgTd  364 (490)
T 3ou5_A          289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE----RGYSLVSGGTD  364 (490)
T ss_dssp             -CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCS
T ss_pred             ccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCCC
Confidence                   345555443333333333333333333333332322 245778899999999999999    89988643 45


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHH
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI----SHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~  448 (457)
                      ++++.+.+....      ....+..+.|.+.||.+....-|....+...+.|||..+.    ...++|++++.+.|.+++
T Consensus       365 nHlvLvDl~~~g------~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l  438 (490)
T 3ou5_A          365 NHLVLVDLRPKG------LDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGV  438 (490)
T ss_dssp             SSEEEEECGGGT------CCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeccccC------CCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence            788888775421      0234555667778999875554433223345689998753    468899999999998877


Q ss_pred             H
Q psy15447        449 D  449 (457)
Q Consensus       449 ~  449 (457)
                      .
T Consensus       439 ~  439 (490)
T 3ou5_A          439 N  439 (490)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.76  E-value=1.3e-16  Score=154.62  Aligned_cols=300  Identities=12%  Similarity=0.118  Sum_probs=187.7

Q ss_pred             cCCCc---EEEecccHHHHHHHHHhhcCC----CCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHH
Q psy15447        138 MGLEE---TALYSFGFSTSASAIAAYVKR----NDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEEL  202 (457)
Q Consensus       138 ~g~~~---~i~~~sG~~a~~~ai~a~~~~----gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~  202 (457)
                      +|.+.   .+++++++.++.+++.+.+++    +|.|++++.+|.+..+++.++|..+++++.        .|++.++++
T Consensus       129 ~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~a  208 (501)
T 3hl2_A          129 AGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAK  208 (501)
T ss_dssp             TTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHH
T ss_pred             cCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHH
Confidence            37553   344555555777766666653    499999999999999999999998877653        279999999


Q ss_pred             HHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc-cccCCCCCCccE
Q psy15447        203 LRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT-EYFGVSTEEVDM  281 (457)
Q Consensus       203 l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~-~~~~~~~~~~Di  281 (457)
                      |+++..       +.+.+|++.+.++..+.+.++++|.++|++||+++++||||+.-. .. ...+. +.+..  .++|+
T Consensus       209 I~e~ga-------~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~-~~-~~~lp~sA~~~--GrAD~  277 (501)
T 3hl2_A          209 VQELGP-------DCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQS-SK-CMHLIQQGARV--GRIDA  277 (501)
T ss_dssp             HHHHCG-------GGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTC-HH-HHHHHHHHHHH--SCCCE
T ss_pred             HHhcCC-------CcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhh-hh-hhhhHHHHHhc--CCCcE
Confidence            998642       456677777666545577899999999999999999999987422 10 00000 11111  12689


Q ss_pred             EEecCccccc-CcccEEE-e-cHHHHHHHHhhCCcceecCCCcHHH-HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        282 IIGSLEHALG-SVGGFCV-G-SSYIIEHHRLSGSGYCFSASLPPFL-AVAANKALHLLKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       282 ~~~s~sK~lg-~~gG~v~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                      ++.|.+|.+- ..||.++ . ++++++.+.....   ...+..|.. ..+++..+-. +...+++++..++.++|++.|+
T Consensus       278 vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yP---Gr~S~Spsldl~~tLL~lGr-~Gy~~ll~e~~ela~~L~~~L~  353 (501)
T 3hl2_A          278 FVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYP---GRASASPSLDVLITLLSLGS-NGYKKLLKERKEMFSYLSNQIK  353 (501)
T ss_dssp             EEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSC---SCBCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecccccceeecCceEEEeCCHHHHHHHHHhCC---CCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999984 3355443 3 4566666543221   111223332 3333222211 1124577888889999999998


Q ss_pred             cccccCCeEEeccCCCCe-EEEEecCCcchHHHHHHHHHHHHHHHHcCee---Eecccc------------CccccCCCC
Q psy15447        358 QHKVTQRFLVQGHRDTPL-KYLYLQKSDDEVASKKLLQTICDMCIQAGFA---ITCPSH------------LDQEAKKQK  421 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~---v~~~~~------------~~~~~~~~~  421 (457)
                      ++....|-++...+..++ +.+.+......  .......+...|..++|-   +.+..-            -+.....+.
T Consensus       354 ~la~~~ge~ll~~~~n~is~a~tl~~~~~~--~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~  431 (501)
T 3hl2_A          354 KLSEAYNERLLHTPHNPISLAMTLKTLDEH--RDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPC  431 (501)
T ss_dssp             HHHHTTTCCBCCCTTCSSEEEEECTTSCTT--TSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSS
T ss_pred             HHHHhcChhhcCCCCCceeEEEeccccccc--ccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCc
Confidence            855444544443333443 33344322100  001355778888887543   322111            000111235


Q ss_pred             CeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        422 PSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       422 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      +++-++....++++|+|.+++.|++++..++.+
T Consensus       432 ~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~  464 (501)
T 3hl2_A          432 AYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE  464 (501)
T ss_dssp             CEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999887644

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.75  E-value=5.2e-16  Score=152.54  Aligned_cols=309  Identities=10%  Similarity=0.121  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHhhcCCCcE---EEecccHHHHHHHHHhhcC----CCCEEEEeCcccHHHHHHHHhcCCeEEEecC----
Q psy15447        125 VVHLDLENDIASFMGLEET---ALYSFGFSTSASAIAAYVK----RNDAVFVDENINFAIQTGLIASRCKVQYFKH----  193 (457)
Q Consensus       125 ~~~~~l~~~la~~~g~~~~---i~~~sG~~a~~~ai~a~~~----~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~----  193 (457)
                      .....+...+.+++|.+..   ++++++|.++.+++.+.++    +++.|++.+.+|.+..+++.+.|....+++.    
T Consensus        98 ~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~  177 (450)
T 3bc8_A           98 KITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEG  177 (450)
T ss_dssp             HHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEET
T ss_pred             HHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecC
Confidence            4445677777777786643   6666666444434333333    3788999999999999999999988776643    


Q ss_pred             ----CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccc
Q psy15447        194 ----NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVT  269 (457)
Q Consensus       194 ----~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~  269 (457)
                          .|++.++++|++...       +.+.+|++.+.++..|.+.|+++|.++|++||+++++|+||+... .. ...+.
T Consensus       178 ~~~~id~~~le~aI~~~~~-------~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~-~~-~~~l~  248 (450)
T 3bc8_A          178 DELRTDLKAVEAKIQELGP-------EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQS-SK-CMHLI  248 (450)
T ss_dssp             TEEECCHHHHHHHHHHHCG-------GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC-HH-HHHHH
T ss_pred             ccCCcCHHHHHHHHHhcCC-------CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhh-hh-hHhHH
Confidence                289999999987541       355777777777666789999999999999999999999987421 10 00011


Q ss_pred             cccCCCCCCccEEEecCcccccC-cc-cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHH
Q psy15447        270 EYFGVSTEEVDMIIGSLEHALGS-VG-GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLR  346 (457)
Q Consensus       270 ~~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~  346 (457)
                      . .++....+|+++.|.+|++.. .+ +++.. +++..+.....-.+  ..++.|.+.+++.+.++- .+...+..++..
T Consensus       249 ~-~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g--~~s~SpsL~l~~~l~~~G-~~g~~~~i~~~~  324 (450)
T 3bc8_A          249 Q-QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPG--RASASPSLDVLITLLSLG-CSGYRKLLKERK  324 (450)
T ss_dssp             H-HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCS--CBCSHHHHHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred             H-HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhc--CCcccHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            0 011102568999999999964 34 44443 55555555432111  122223333333333220 111123445557


Q ss_pred             HHHHHHHHHhhcccccCCeEEeccCCCCe-EEEEecC-----CcchHHHHHHHHHHHHHHHHcC---eeEec--------
Q psy15447        347 EKCNTMHSLLSQHKVTQRFLVQGHRDTPL-KYLYLQK-----SDDEVASKKLLQTICDMCIQAG---FAITC--------  409 (457)
Q Consensus       347 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~~-----~~~~~~~~~~~~~~~~~l~~~G---i~v~~--------  409 (457)
                      ++.+++++.|+++....|..+...+..++ ..+.+..     +.       +..++.-.+...|   .-+.+        
T Consensus       325 ~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~-------D~tkl~i~~~~~g~sG~~v~~~~~~~~~~  397 (450)
T 3bc8_A          325 EMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDK-------AVTQLGSMLFTRQVSGARAVPLGNVQTVS  397 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSC-------HHHHHHHHHHHTTCCSCEEECSCCEEEET
T ss_pred             HHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccC-------CCceeEEEecCCCCccceeeecccccchh
Confidence            78889998887732112655543222221 1122221     12       3445666666655   33220        


Q ss_pred             ----cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        410 ----PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       410 ----~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                          ..|-...-.....++-+.++...+++|+++++++|+++.+..++
T Consensus       398 ~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~  445 (450)
T 3bc8_A          398 GHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK  445 (450)
T ss_dssp             TEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                00100000123567888889999999999999999998776643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	457
d1fc4a_	401	c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {E	3e-55
d1bs0a_	383	c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-a	2e-46
d2bwna1	396	c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rho	5e-36
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-12
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	1e-11
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	8e-10
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	5e-08
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	3e-07
d1c4ka2	462	c.67.1.5 (A:108-569) Ornithine decarboxylase major	8e-07
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	1e-06
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	5e-06
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	6e-05
d1sffa_	425	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	5e-04

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

 Score =  186 bits (474), Expect = 3e-55
 Identities = 101/380 (26%), Positives = 156/380 (41%), Gaps = 27/380 (7%)

Query: 71  SGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDL 130
              I   +G   INF  +NYL    +PD+   A   +D +G G    R   GT   H +L
Sbjct: 36  QADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKEL 95

Query: 131 ENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQY 190
           E  +A+F+G+E+  LYS  F  +       +   DA+  D   + +I  G+   + K   
Sbjct: 96  EQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYR 155

Query: 191 FKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARI 250
           + +N+MQ LE  L++  E     +      I  +GV+     I  LK +  L  KY A +
Sbjct: 156 YANNDMQELEARLKEARE-----AGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALV 210

Query: 251 FVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRL 309
            VD+S + G +G  G G  EY  V    VD+I G+L  AL G+ GG+      ++E  R 
Sbjct: 211 MVDDSHAVGFVGENGRGSHEYCDVM-GRVDIITGTLGKALGGASGGYTAARKEVVEWLRQ 269

Query: 310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQG 369
               Y FS SL P +  A+ K L +++A   L  +L          +S    T       
Sbjct: 270 RSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFT-----LA 324

Query: 370 HRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGF---AITCPSHLDQEAKKQKPSIRI 426
             D  +  + L   D  VA     Q       + G        P        K +  IR 
Sbjct: 325 GADHAIIPVML--GDAVVA-----QKFARELQKEGIYVTGFFYPV-----VPKGQARIRT 372

Query: 427 TCNISHTEQDMNSLIETLCK 446
             + +HT + +   +E   +
Sbjct: 373 QMSAAHTPEQITRAVEAFTR 392

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]} Length = 383

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

 Score =  162 bits (411), Expect = 2e-46
 Identities = 81/382 (21%), Positives = 158/382 (41%), Gaps = 29/382 (7%)

Query: 66  VVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNV 125
            V Q +G  +  +    +NF++++YL    +P I +      ++ G+GS G     G +V
Sbjct: 24  PVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSV 83

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASR 185
           VH  LE ++A ++G     L+  GF+ + + IAA + + D +  D   + ++      S 
Sbjct: 84  VHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSP 143

Query: 186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSK 245
            +++ F HN++ HL  LL        +        ++ EGV+    D  PL +I  +  +
Sbjct: 144 SQLRRFAHNDVTHLARLLASPCPGQQM--------VVTEGVFSMDGDSAPLAEIQQVTQQ 195

Query: 246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIE 305
           +   + VD++   G +G  G G      V  E + +  G      G  G   + SS + +
Sbjct: 196 HNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGK---GFGVSGAAVLCSSTVAD 252

Query: 306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRF 365
           +         +S S+PP  A A   +L +++++       R +         +  V    
Sbjct: 253 YLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEG---DARREKLAALITRFRAGVQDLP 309

Query: 366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC---PSHLDQEAKKQKP 422
                  + ++ L +   D+  A +     + +   Q G  +T    P+           
Sbjct: 310 FTLADSCSAIQPLIV--GDNSRALQ-----LAEKLRQQGCWVTAIRPPT-----VPAGTA 357

Query: 423 SIRITCNISHTEQDMNSLIETL 444
            +R+T   +H  QD++ L+E L
Sbjct: 358 RLRLTLTAAHEMQDIDRLLEVL 379

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

 Score =  135 bits (339), Expect = 5e-36
 Identities = 82/376 (21%), Positives = 150/376 (39%), Gaps = 29/376 (7%)

Query: 75  VNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDI 134
            +        +  ++YL   ++P +     + ++  G GS G R   GT   H  LE +I
Sbjct: 40  PDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEI 99

Query: 135 ASFMGLEETALYSFGFSTSASAIAAYVKR--NDAVFVDENINFAIQTGLIASRCKVQYFK 192
           A     E   ++S  ++ + + ++          ++ D   + ++  G+  +    + F+
Sbjct: 100 AGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFR 159

Query: 193 HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFV 252
           HN++ HL EL+   D           K I  E VY    D  P+K+I  +  ++ A  ++
Sbjct: 160 HNDVAHLRELIAADD-------PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYI 212

Query: 253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS 312
           DE  + G  G  G GV E  G+    +D+  G+L  A G  GG+   S+ +++  R    
Sbjct: 213 DEVHAVGMYGPRGAGVAERDGL-MHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAP 271

Query: 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD 372
           G+ FS SLPP +A  A  ++  LK       KLR+       +L          +  H  
Sbjct: 272 GFIFSTSLPPAIAAGAQASIAFLKTAEG--QKLRDAQQMHAKVLKMRLKALGMPIIDH-G 328

Query: 373 TPLKYLYLQKSDDEVA-SKKLLQTICDMCIQAGF---AITCPSHLDQEAKKQKPSIRITC 428
           + +  + +       A S  LL          G     I  P+       +    +R T 
Sbjct: 329 SHIVPVVIGDPVHTKAVSDMLLS-------DYGVYVQPINFPT-----VPRGTERLRFTP 376

Query: 429 NISHTEQDMNSLIETL 444
           +  H  + ++ L+  +
Sbjct: 377 SPVHDLKQIDGLVHAM 392

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.0 bits (159), Expect = 2e-12
 Identities = 38/327 (11%), Positives = 83/327 (25%), Gaps = 24/327 (7%)

Query: 121 YGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG 180
           YG +    +LE   A   G E       G   +  +I A+ +R D V ++ + +      
Sbjct: 30  YGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEV 89

Query: 181 LIASRCKVQYFKHNNMQHLEELLRQQDE---RDTLNSKVTKKFIIVEGVYMNSADICPLK 237
              +            ++         +      ++   T    I      +   + PL+
Sbjct: 90  GAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLE 149

Query: 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFC 297
           +I  + +  +               ++          +     ++    +     VG   
Sbjct: 150 NIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVV 209

Query: 298 VGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS 357
           VG    IE  R +             LA A   AL  +        +           + 
Sbjct: 210 VGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG 269

Query: 358 QHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEA 417
                         D     + L+  + +V +        +    +G      S      
Sbjct: 270 --------YSVNPEDVKTNMVILRTDNLKVNAHGF----IEALRNSGVLANAVSD----- 312

Query: 418 KKQKPSIRITCNISHTEQDMNSLIETL 444
                 IR+  +   +  D+   +   
Sbjct: 313 ----TEIRLVTHKDVSRNDIEEALNIF 335

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.7 bits (153), Expect = 1e-11
 Identities = 33/334 (9%), Positives = 93/334 (27%), Gaps = 20/334 (5%)

Query: 116 GPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINF 175
           G      T  +H  + N +  F+G +   + +       + + +  K++  V +DEN ++
Sbjct: 38  GRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHY 97

Query: 176 AIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADIC 234
           +       +   +      +            +      K  +  + +         ++ 
Sbjct: 98  SSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLP 157

Query: 235 PLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG 294
            +K I  + S+Y   + V+ + + G +  +   +   F        +  G    A     
Sbjct: 158 DVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADF-------IVGSGHKSMAASGPI 210

Query: 295 GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLR----EKCN 350
           G         E        Y                 + L+ + P +  +++    E   
Sbjct: 211 GVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 270

Query: 351 TMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCP 410
                    K+  + L     +  L + + +   + ++ K                I   
Sbjct: 271 ARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYE-ISKKAKGGRFFLYRELKSRKIHG- 328

Query: 411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL 444
                  K              ++++++ ++   
Sbjct: 329 ------IKPGLTRYFKLSTYGLSDEEVDYVLNAF 356

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 58.4 bits (140), Expect = 8e-10
 Identities = 52/418 (12%), Positives = 108/418 (25%), Gaps = 61/418 (14%)

Query: 83  INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF---------YGTNVVHLDLEND 133
           I  +  N        D E   ID +  +G G+               +  +  +  L   
Sbjct: 27  IIKSGMNPFLL----DSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSGSRSYYALAES 82

Query: 134 IASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAI-------QTGLIASRC 186
           + +  G + T     G       I   +K+ +     +              T   +   
Sbjct: 83  VKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQIN 142

Query: 187 KVQ-----------------YFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN 229
                               +  + +++ LE  + +    +          I        
Sbjct: 143 GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNV---PYIVATITSNSAGGQ 199

Query: 230 SADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV--------DM 281
              +  LK + S+  KY   + +D +              EY   + E++        DM
Sbjct: 200 PVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADM 259

Query: 282 IIGSLEHALGSVGGFCVGS-------SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHL 334
           +  S +       G  +          Y              +       A+        
Sbjct: 260 LAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY 319

Query: 335 LKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQ 394
              N   L     +   +   L +  V  +             L      D+  ++ L  
Sbjct: 320 DGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALAC 379

Query: 395 TICDM-CIQAGFAITCPSHLDQEAKKQKPS----IRITCNI-SHTEQDMNSLIETLCK 446
            +  +  I+A    +     D +  KQ P     +R+T    ++T+  M+ +IE    
Sbjct: 380 ELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKH 437

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 52.9 bits (126), Expect = 5e-08
 Identities = 41/360 (11%), Positives = 99/360 (27%), Gaps = 38/360 (10%)

Query: 121 YGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENI------- 173
           Y  +     LE  +    G +       G           +K    V  +          
Sbjct: 71  YAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQ 130

Query: 174 -------NFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV 226
                     ++     +   + +    ++  L  L++++   +     +     +  G 
Sbjct: 131 EKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQ 190

Query: 227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEV------- 279
            ++ A++  + ++    S Y  +IF D +               Y  VS +++       
Sbjct: 191 PVSMANMRAVHEMA---STYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSY 247

Query: 280 -DMIIGSLEHALGSVGGF--CVGSSYIIEHHR-LSGSGYCFSASLPPFLAVAANKALHLL 335
            D    S +       G   C+    +    + L        +            A+ L 
Sbjct: 248 ADGCTMSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLR 307

Query: 336 KA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR---DTPLKYLYLQKSDDEVASKK 391
           +A     +    ++   +   L +  V       GH    D      +L   D   A   
Sbjct: 308 EAMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHL-TQDQFPAQSL 366

Query: 392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPS----IRITCNIS-HTEQDMNSLIETLCK 446
                 +  +++       +   +E  +        +R+T     +T   M+ + + + K
Sbjct: 367 AASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIK 426

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.3 bits (119), Expect = 3e-07
 Identities = 28/343 (8%), Positives = 89/343 (25%), Gaps = 31/343 (9%)

Query: 129 DLENDIASFMGLEETALYSFGFSTSASAIAA-------YVKRNDAVFVDENINFAIQTGL 181
            L  ++    G+   A        +  ++            +   +        +    +
Sbjct: 98  SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM 157

Query: 182 IASRCKVQYFK----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK 237
           + +  +    +     + ++   + +  + +      +           +        L+
Sbjct: 158 VTAGFEPVVIENVLEGDELRTDLKAVEAKIQELG--PEHILCLHSTTACFAPRV-PDRLE 214

Query: 238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VGGF 296
           ++  + + Y     V+ +    +            G     +D  + SL+      VGG 
Sbjct: 215 ELAVICANYDIPHVVNNAYGLQSSKCMHLIQ---QGARVGRIDAFVQSLDKNFMVPVGGA 271

Query: 297 CVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL--HLLKANPSLLTKLREKCNTMHS 354
            +          +S      +++ P    +    +L     +       ++    +T   
Sbjct: 272 IIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLK 331

Query: 355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLD 414
            L++    +      +  +    L       + A  +L   +    +    A+   +   
Sbjct: 332 KLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQT 391

Query: 415 QEAKKQK-----------PSIRITCNISHTEQDMNSLIETLCK 446
                 +             +     I    QD++  I+ L K
Sbjct: 392 VSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDK 434

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Length = 462

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

 Score = 48.9 bits (115), Expect = 8e-07
 Identities = 49/393 (12%), Positives = 95/393 (24%), Gaps = 77/393 (19%)

Query: 126 VHLDLENDIASFMGLEETALYSFGFSTS-ASAIAAYVKRNDAVFVDENINFAIQTGLIAS 184
             +  E   A     ++T     G S +  +  +A V   D V  D N + ++    +A 
Sbjct: 67  PAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAM 126

Query: 185 RCKVQYFKHNNMQH----------------LEELLRQQDERDTLNSKVTKKFIIVEGVYM 228
                 +   N                   + EL  + D       +  +  +I  G Y 
Sbjct: 127 AGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYD 186

Query: 229 NSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS----TEEVDMIIG 284
               I    +++         I  D +             +    +      +   +++ 
Sbjct: 187 G--TIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQ 244

Query: 285 SLEHALGSVGGFCV---------GSSYIIEHHRLSGSGYCFSASLPPF-----LAVAANK 330
           S+                     G     +H   + S   F ++ P +     L V A  
Sbjct: 245 SVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAM 304

Query: 331 AL-----HLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD 385
                   L         + R+K     S+    +     +V G +        +  + D
Sbjct: 305 QEGEAGRKLWHDLLITTIEARKKLIKAGSMF---RPFVPPVVNGKKWEDGDTEDMANNID 361

Query: 386 EVASKKLLQTICDMCIQAGFAITCPSHLD------------------------------- 414
               +K  +               P+                                  
Sbjct: 362 YWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHG 421

Query: 415 -QEAKKQKPSIRITCNISHTEQDMNSLIETLCK 446
               K    SI      + T   MN+LI  L +
Sbjct: 422 IIPEKSDLNSILFLMTPAETPAKMNNLITQLLQ 454

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 35/372 (9%), Positives = 99/372 (26%), Gaps = 41/372 (11%)

Query: 81  PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL 140
           P + F++ N      +P++ +  +                YGT+ +   ++         
Sbjct: 3   PALGFSSDNIAGA--SPEVAQALVKHSSGQAGP-------YGTDELTAQVKRKFCEIFER 53

Query: 141 EETALY-SFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIAS-----RCKVQYFKHN 194
           +        G + +A  ++A       ++     +                  +      
Sbjct: 54  DVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPA 113

Query: 195 NMQHLEELLRQQDERDTLNSKVTKKFII--VEGVYMNSADICPLKDILSLRSKYQARIFV 252
               +  L  +  E+           +         +   +  ++ I  +       + +
Sbjct: 114 AKLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHM 173

Query: 253 DESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS 312
           D S     L S G    E    +     +  G+ ++ + +     + ++ +         
Sbjct: 174 DGSRFANALVSLGCSPAEMTWKA-GVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRK 232

Query: 313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD 372
                +S         +  +     +   L   R+       L    +      V G  +
Sbjct: 233 RAGHLSSKMR----FLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTE 288

Query: 373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISH 432
             + +  L   D  +             ++AGF            +     +R   + + 
Sbjct: 289 ANILFCRL---DSAMIDA---------LLKAGFGFYHD-------RWGPNVVRFVTSFAT 329

Query: 433 TEQDMNSLIETL 444
           T +D++ L+  +
Sbjct: 330 TAEDVDHLLNQV 341

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 46.1 bits (108), Expect = 5e-06
 Identities = 34/329 (10%), Positives = 87/329 (26%), Gaps = 27/329 (8%)

Query: 129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDA-----VFVDENINFAIQTGLIA 183
            +       +GL   A+ +   ST  S                V      + +    +  
Sbjct: 117 KILESFFKQLGLNVHAI-ATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSF 175

Query: 184 SRCKVQYFK--------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP 235
               ++  +        +  ++ +E  ++++ E            ++    +    +   
Sbjct: 176 VGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNR------PCVLSTLTFFPPRNSDD 229

Query: 236 LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG 295
           + +I  +   Y     ++ + +                     VD ++ S +  L +  G
Sbjct: 230 IVEIAKICENYDIPHIINGAYAIQNNYYLEK----LKKAFKYRVDAVVSSSDKNLLTPIG 285

Query: 296 FCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSL 355
             +  S   E  +     Y   AS  P +    +      K    L+   +     +  L
Sbjct: 286 GGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 345

Query: 356 LSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ 415
           L+                    + +     E+A+K  L  +     +         +   
Sbjct: 346 LNDLSKKTGGKFLDVESPIASCISVNSDPVEIAAK--LYNLRVTGPRGIKKTDHFGNCYL 403

Query: 416 EAKKQKPSIRITCNISHTEQDMNSLIETL 444
                   I +   I    +D+ + +  L
Sbjct: 404 GTYT-HDYIVMNAAIGVRTEDIVNSVSKL 431

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 43.0 bits (100), Expect = 6e-05
 Identities = 42/391 (10%), Positives = 95/391 (24%), Gaps = 48/391 (12%)

Query: 104 IDCIDKNGVGSCGPRGF---------YGTNVVHLDLENDIASFMGLEETALYSFGFSTSA 154
           ID +  +G  +     +         Y  +  + DL++        +       G     
Sbjct: 45  IDLLTDSGTNAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAEN 104

Query: 155 SAIAAYVKRNDAV------------FVDENINFAIQTGLIASRCKVQYFKH-------NN 195
                 +K                   D         G  A     +             
Sbjct: 105 ILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKG 164

Query: 196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDES 255
              +++L     +    N       +           +  LK++  +  ++   + +D +
Sbjct: 165 DFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSA 224

Query: 256 VSFGTLGSTGHGVTEYFGVSTEEV--------DMIIGSLEHALGSVGGFCVGS-----SY 302
                         +Y   + +EV        D +  S +       G  V        +
Sbjct: 225 RFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIF 284

Query: 303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVT 362
            +   R        +        +AA             L     +   +   L +  + 
Sbjct: 285 TLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIP 344

Query: 363 QRFLVQGHR--DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQ 420
            ++   GH       K +     D   A   +     +  ++A    +     D    +Q
Sbjct: 345 IQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQ 404

Query: 421 KP----SIRITCNI-SHTEQDMNSLIETLCK 446
           K      +R+T     +T   M+ + + L  
Sbjct: 405 KHADMEFMRLTIARRVYTNDHMDYIADALIG 435

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (92), Expect = 5e-04
 Identities = 34/232 (14%), Positives = 74/232 (31%), Gaps = 19/232 (8%)

Query: 221 IIVEGV----YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST 276
           I++E V       ++    ++ + +L  ++   +  DE V  G   +      E  GV  
Sbjct: 202 IVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE-VQSGAGRTGTLFAMEQMGV-- 258

Query: 277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK 336
              D+   +   A G       G + +++     G G  ++ +  P   VAA + L + +
Sbjct: 259 -APDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGN--PIACVAALEVLKVFE 315

Query: 337 ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTI 396
               L             LL+  +              +     +  D      KL   I
Sbjct: 316 QENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEI 375

Query: 397 CDMCIQAGFAI-TCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS 447
                  G  + +C  + +         +RI   ++  +  +   +E + + 
Sbjct: 376 VARARDKGLILLSCGPYYN--------VLRILVPLTIEDAQIRQGLEIISQC 419

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	457
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	100.0
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	100.0
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	100.0
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	100.0
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	100.0
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	100.0
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	100.0
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	100.0
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.98
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.97
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.97
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.97
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.96
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.96
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.96
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.96
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.96
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.96
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.95
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.95
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.95
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.95
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.95
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.95
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.95
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.94
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.94
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.94
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.94
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.94
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.94
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.94
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.94
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.93
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.92
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.92
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.91
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.9
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.9
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.9
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.9
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.9
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.9
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.89
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.89
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.89
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.88
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.88
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.88
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.88
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.88
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.87
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.87
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.87
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.87
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.86
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.86
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.86
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.86
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.86
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.85
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.85
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.85
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.85
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.85
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.84
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.84
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.84
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.84
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.84
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.83
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.83
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.83
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.82
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.81
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.81
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.8
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.79
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.68
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.6
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.58
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.56
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.4

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-60  Score=469.32  Aligned_cols=387  Identities=25%  Similarity=0.398  Sum_probs=354.8

Q ss_pred             hhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC
Q psy15447         37 INVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC  115 (457)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~  115 (457)
                      +.+.+.+++++.+++++         ...++++++|+++|+ ||++||||+||+|||++.||+|++++.+++++||.+++
T Consensus        10 ~~~~~~l~~~~~~g~~r---------~~~~i~~~~g~~v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~   80 (401)
T d1fc4a_          10 QQLTNDLETARAEGLFK---------EERIITSAQQADITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMA   80 (401)
T ss_dssp             HHHHHHHHHHHHTTCCC---------CCCCBCSCSSSEEEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHcCCCC---------cceeccCCCCCeEEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCcc
Confidence            45777788888888887         356789999999995 99999999999999999999999999999999999999


Q ss_pred             CCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC
Q psy15447        116 GPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN  195 (457)
Q Consensus       116 ~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d  195 (457)
                      ++|...|+.+.+.+||++||+++|.+.+++++||+.|+..+++++++++|.|+.+...|.++..++..+++++..++++|
T Consensus        81 ~sr~~~g~~~~~~~lE~~lA~~~g~e~al~~~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~~d  160 (401)
T d1fc4a_          81 SVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANND  160 (401)
T ss_dssp             SCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECTTC
T ss_pred             cceeeccCcHHHHHHHHHHHHhhcCCceEEecchhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCC
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      ++++++.+++....     +..+++|++|+++++.|.+.||+++++||++||++||+||+|++|++|.+|+|..+++++.
T Consensus       161 ~~~le~~~~~~~~~-----~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~  235 (401)
T d1fc4a_         161 MQELEARLKEAREA-----GARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVM  235 (401)
T ss_dssp             HHHHHHHHHHHHHT-----TCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCT
T ss_pred             hHHHHHHHHHhhhc-----ccCceEEEEcCCCCCCCchhhhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCC
Confidence            99999998876531     2556899999999999999999999999999999999999999999999999998999885


Q ss_pred             CCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        276 TEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       276 ~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                       .++||+++|++|++| ..||+++++++++++++....++.|+++++|..++++.++++.+.+.++++++++++.+++++
T Consensus       236 -~~~dii~~tl~Ka~gg~~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~  314 (401)
T d1fc4a_         236 -GRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFRE  314 (401)
T ss_dssp             -TCCSEEEEESSSTTCSSSCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             -CCCeEEEeecccccccCCcccccCCHHHHHHHHcCChhhhhcCCCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHh
Confidence             578999999999995 468999999999999998888899999999999999999999998888899999999999999


Q ss_pred             HhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447        355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~  434 (457)
                      .+.+    .++.+. ...+|++++.++++.       .+..+.++|+++||++.+..||.+  +.+..++|++++..||+
T Consensus       315 ~l~~----~g~~~~-~~~~pIv~v~~~~~~-------~a~~~~~~L~~~Gi~v~~i~~PtV--p~g~~~lRi~~~a~hT~  380 (401)
T d1fc4a_         315 QMSA----AGFTLA-GADHAIIPVMLGDAV-------VAQKFARELQKEGIYVTGFFYPVV--PKGQARIRTQMSAAHTP  380 (401)
T ss_dssp             HHHH----TTCCBC-CSSSSEEEEEEECHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEEEEECCTTCCH
T ss_pred             hhcc----cCCccC-CCCCCEEEEEECCHH-------HHHHHHHHHHHCCceEEeECCCCC--CCCCceEEEEECCCCCH
Confidence            9998    676654 457899999888765       677899999999999999999877  66677899999999999


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q psy15447        435 QDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       435 edi~~~~~~l~~~~~~~~  452 (457)
                      +|||+++++|+++.+++.
T Consensus       381 edId~~v~al~ev~~~lg  398 (401)
T d1fc4a_         381 EQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhC
Confidence            999999999999988763

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=100.00  E-value=4.8e-60  Score=460.07  Aligned_cols=379  Identities=21%  Similarity=0.360  Sum_probs=338.6

Q ss_pred             hHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEE-----E--CCeeeEEeecCCccCCCCChhhHHHHHHHHHhc
Q psy15447         38 NVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVN-----I--NGIPCINFATHNYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~-----~--~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      .+++.+++++.++++.         ....+++..|.+.+     .  ++++++||+||+|||+..||++++++.+++++|
T Consensus         5 ~~~~~l~~l~~~g~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~FsSndYLGL~~~p~v~~a~~~al~~y   75 (396)
T d2bwna1           5 ALDKAIQKLHDEGRYR---------TFIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAV   75 (396)
T ss_dssp             HHHHHHHHHHHTTCCC---------CCCEEEECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCc---------cccccccccCCCCcceEeecCCCCeEEEEEEcccccCcCCCHHHHHHHHHHHHHh
Confidence            4556677777777766         23455666664321     1  469999999999999999999999999999999


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh--cCCCCEEEEeCcccHHHHHHHHhcCCeE
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY--VKRNDAVFVDENINFAIQTGLIASRCKV  188 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~--~~~gd~v~~~~~~h~~~~~~~~~~g~~~  188 (457)
                      |.+++++|.++|+.+.+.+||++||+++|.+.+++++||+.||..++.++  .+++|.|+.|...|.++..+++++++++
T Consensus        76 G~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~e~all~~sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~  155 (396)
T d2bwna1          76 GAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPK  155 (396)
T ss_dssp             CSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCE
T ss_pred             CCCccccccccCCchHHHHHHHHHHHHhCCCceeeeecchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCc
Confidence            99999999999999999999999999999999999999999999999987  5789999999999999999999999999


Q ss_pred             EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447        189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV  268 (457)
Q Consensus       189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~  268 (457)
                      ..++|||++++++.++...       +...++|++|++++++|.+.|+++|.+||++||++|++||+|++|++|++|+|.
T Consensus       156 ~~f~Hnd~~~l~~l~~~~~-------~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~  228 (396)
T d2bwna1         156 RIFRHNDVAHLRELIAADD-------PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGV  228 (396)
T ss_dssp             EEECTTCHHHHHHHHHHSC-------TTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCH
T ss_pred             eEeecchHHHhhhHHhhhc-------ccCceeEEEEeeccCcccccccHhHHHHhhhhcceeeeccceeeeeeccccccc
Confidence            9999999999999887644       256679999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHH
Q psy15447        269 TEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLR  346 (457)
Q Consensus       269 ~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~  346 (457)
                      .+++++. ..+||+++||+|++|+.||||++++++++++++.+.++.|++++||..+++++++++++...  ++++++++
T Consensus       229 ~~~~~~~-~~~di~~gTlsKa~g~~Gg~v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~l~  307 (396)
T d2bwna1         229 AERDGLM-HRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQ  307 (396)
T ss_dssp             HHHHTCG-GGCSEEEEESSSTTCSCCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             hhhcCCc-eeeeeeeecccccccccccccchhHHHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence            9999985 67899999999999999999999999999999999999999999999999999999987643  34578888


Q ss_pred             HHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEE
Q psy15447        347 EKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIR  425 (457)
Q Consensus       347 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lR  425 (457)
                      ++.+++++.|.+    .|+++. +..+|++++.++++.       .+..++++|+ ++||++.+..||.+  |.+..++|
T Consensus       308 ~~~~~~~~~l~~----~g~~~~-~~~spIvpv~ig~~~-------~~~~~a~~lL~e~Gi~v~~i~~PtV--p~g~~rlR  373 (396)
T d2bwna1         308 MHAKVLKMRLKA----LGMPII-DHGSHIVPVVIGDPV-------HTKAVSDMLLSDYGVYVQPINFPTV--PRGTERLR  373 (396)
T ss_dssp             HHHHHHHHHHHH----HTCCBC-CCSSSCEEEECCCHH-------HHHHHHHHHHHHHCEECCEECTTTS--CTTCCEEE
T ss_pred             HHHHHHHHHHHh----cCCCcC-CCCCCEEEEEeCCHH-------HHHHHHHHHHHhCCEEEEEECCCcC--CCCCeeEE
Confidence            999999999988    677765 567999999998765       6778888866 67999999999987  67778999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHH
Q psy15447        426 ITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       426 i~~~~~~t~edi~~~~~~l~~~  447 (457)
                      |+++..||++|||+++++|+++
T Consensus       374 i~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         374 FTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             ECCCTTSCHHHHHHHHHHHHHH
T ss_pred             EEeCccCCHHHHHHHHHHHHHh
Confidence            9999999999999999999875

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-59  Score=458.35  Aligned_cols=377  Identities=21%  Similarity=0.352  Sum_probs=344.1

Q ss_pred             hhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCC
Q psy15447         37 INVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNINGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCG  116 (457)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~  116 (457)
                      +++++.+++....+.++         .++++.+++|+++.+||++++||+||+|||++.||++++++.+++++||.++++
T Consensus         4 ~~~~~~l~~~~~~~~~~---------~~~~~~~~~g~~i~~~g~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~G~~~~~   74 (383)
T d1bs0a_           4 EKINAALDARRAADALR---------RRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGG   74 (383)
T ss_dssp             HHHHHHHHHCCGGGCCC---------CCCCCSBCSSSEEEETTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCS
T ss_pred             HHHHHHHHHHHHhCCCc---------cccccCCCCCCeEEECCeEEEEEEcccccccCCCHHHHHHHHHHHHHhCCCCCc
Confidence            34666666666666665         466789999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCH
Q psy15447        117 PRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNM  196 (457)
Q Consensus       117 ~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~  196 (457)
                      +|.++|+.+.+.+||++||+++|.+.+++++||+.|+..++.++.+++|.|+.+...|.++..+.+.++.+++.++|+|+
T Consensus        75 sr~~~g~~~~~~~lE~~LA~~~g~e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~  154 (383)
T d1bs0a_          75 SGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDV  154 (383)
T ss_dssp             BTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCH
T ss_pred             cccccCcchHHHHHHHHHHHhcCCCceEEecccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecchHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++++.+.+..        +.+.+|++|++++++|.+.|+++|+++|++||++|++||+|++|++|.+|+|..+++++.+
T Consensus       155 ~~le~~l~~~~--------~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~~~  226 (383)
T d1bs0a_         155 THLARLLASPC--------PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKP  226 (383)
T ss_dssp             HHHHHHHHSCC--------SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCC
T ss_pred             HHHHHHhcccC--------CCceEEEecCCCCCCCcccchhHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCCcc
Confidence            99999998754        4668999999999999999999999999999999999999999999999999999999865


Q ss_pred             CCccEEEecCcccccCcccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHS  354 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~  354 (457)
                         |+++.|++|++|..||+++++.++++.++..+.++.|+++.+|..++++.+++++++..  +.++++++++..++++
T Consensus       227 ---~~~~~t~~ka~g~~Gg~v~~~~~~~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~  303 (383)
T d1bs0a_         227 ---ELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRA  303 (383)
T ss_dssp             ---SEEEEESSSTTSSCCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccccccccccccccccccccchhHHHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence               67788999999999999999999999999998899999999999999999999887653  4577889999999999


Q ss_pred             HhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447        355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~  434 (457)
                      .|++    .|+.+. +..++++++.++++.       .+.++.+.|+++||++.+..||.+  +.+...+|++++..||+
T Consensus       304 ~l~~----~g~~~~-~~~s~Ii~v~~g~~~-------~a~~~~~~L~~~Gi~v~~~~~PtV--p~g~~~lRi~~~a~ht~  369 (383)
T d1bs0a_         304 GVQD----LPFTLA-DSCSAIQPLIVGDNS-------RALQLAEKLRQQGCWVTAIRPPTV--PAGTARLRLTLTAAHEM  369 (383)
T ss_dssp             HHTT----SSCEEC-SCCSSBCCEEEESHH-------HHHHHHHHHHHTTEECCEECTTSS--CTTCEEECCBCCTTCCH
T ss_pred             HHHh----cCCccC-CCCCCEEEEEECCHH-------HHHHHHHHHHHCCceEEEEcCCCC--CCCCceEEEEeCCCCCH
Confidence            9998    777764 567899888887754       677899999999999999999877  66677899999999999


Q ss_pred             HHHHHHHHHHHHH
Q psy15447        435 QDMNSLIETLCKS  447 (457)
Q Consensus       435 edi~~~~~~l~~~  447 (457)
                      ||||+++++|+.+
T Consensus       370 edid~l~~~L~~~  382 (383)
T d1bs0a_         370 QDIDRLLEVLHGN  382 (383)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999864

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-45  Score=359.18  Aligned_cols=365  Identities=15%  Similarity=0.118  Sum_probs=289.5

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      .++++.++..++.++.++|         .|+++++++|+|||+ |||+||||.++   ..+|+ +||+|.+|+.+|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~p---------~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Av~~q~~~~   73 (404)
T d2byla1           4 TSDDIFEREYKYGAHNAHP---------LPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGH-CHPKIVNALKSQVDKL   73 (404)
T ss_dssp             CHHHHHHHHHHHBCSCCCC---------EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHhccCCCCC---------CCceEEEeecCEEEECCCCEEEEecCCHHHHhhcC-CCHHHHHHHHHHHhhC
Confidence            4578888888887766655         588899999999995 99999999874   34566 4999999999999986


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHH
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQT  179 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~  179 (457)
                      .+.+..     ..++...++++.++++.+.+.+++++||++|++.|++...           +++.++.....+|+.+..
T Consensus        74 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~  148 (404)
T d2byla1          74 TLTSRA-----FYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLS  148 (404)
T ss_dssp             CCCCTT-----EEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHH
T ss_pred             CCcccc-----cccchHHHHHHhhhhcccccccccccCccccchhHHHHHHHHhhhccccccccccccccCCCccccccc
Confidence            643321     1355677888999999999999999999999999998642           345577788889987776


Q ss_pred             HHHhcC------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHH
Q psy15447        180 GLIASR------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLR  243 (457)
Q Consensus       180 ~~~~~g------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~  243 (457)
                      ++...+            ..+..++++|++++++.+..          +++++|++||+++.+|.+.|    +++|+++|
T Consensus       149 ~~~~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~l~~----------~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc  218 (404)
T d2byla1         149 AISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD----------PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELC  218 (404)
T ss_dssp             HHTTCCCHHHHTTSCSCCTTEEEECTTCHHHHHHHHTS----------TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHH
T ss_pred             eeccCCCcccccCCCCCCCCeeEecccCHHHHHHhcCC----------CCeEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence            665543            23567889999999999864          56889999999999998876    89999999


Q ss_pred             HHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCC
Q psy15447        244 SKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSAS  319 (457)
Q Consensus       244 ~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~  319 (457)
                      ++||++||+||+++ +|++|.  .+..+++|+.|   ||+  +++|++|+   +.|++++++++++.+....+..+|+  
T Consensus       219 ~~~g~llI~DEV~tGfgR~G~--~~a~~~~gv~P---Di~--~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~--  289 (404)
T d2byla1         219 TRHQVLFIADEIQTGLARTGR--WLAVDYENVRP---DIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYG--  289 (404)
T ss_dssp             HHHTCEEEEECTTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSST--
T ss_pred             HhcCeEEEeeccccccccccc--cchhhhcCCCC---CEE--EECchhhCCCccceeeeechhhhhccCCCCCCcCCC--
Confidence            99999999999985 555543  34568899988   787  89999963   4588999999988776555444444  


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDM  399 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  399 (457)
                      .+|++|++++++|+++++.+ +.++.+++.+++++.|++++. ..+.-+ +..+.+..+.+.+....     ...++.++
T Consensus       290 gnpl~~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~l~~l~~-~~i~~v-Rg~Gl~~~i~~~~~~~~-----~~~~~~~~  361 (404)
T d2byla1         290 GNPLGCRVAIAALEVLEEEN-LAENADKLGIILRNELMKLPS-DVVTAV-RGKGLLNAIVIKETKDW-----DAWKVCLR  361 (404)
T ss_dssp             TCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHTSCT-TTEEEE-EEETTEEEEEECCCSSC-----CHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHhcC-chhhhhHhhHHHHHHHHhhcc-ccceee-eecccEEEEEEecCCch-----hHHHHHHH
Confidence            59999999999999998764 889999999999999988542 222211 34577877877654321     45578999


Q ss_pred             HHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        400 CIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       400 l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      |+++|+++.+..         .+.+|++|++++|++|||+++++|++++.+
T Consensus       362 l~~~Gvl~~~~~---------~~~i~l~PpL~it~~~id~~~~~l~~al~~  403 (404)
T d2byla1         362 LRDNGLLAKPTH---------GDIIRFAPPLVIKEDELRESIEIINKTILS  403 (404)
T ss_dssp             HHHTTEECEEEE---------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCeEEecCC---------CCEEEEECCcCCCHHHHHHHHHHHHHHHHc
Confidence            999999987543         478999999999999999999999999864

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-43  Score=347.86  Aligned_cols=383  Identities=14%  Similarity=0.115  Sum_probs=286.3

Q ss_pred             ChhhHHHHHcccCCCCCCCccccccccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhc
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKFKDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKN  110 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~  110 (457)
                      +++++.++..+..|.++..+        .|+++++++|+|||+ |||+||||.++   ..+|+ +||+|.+|+.+|++++
T Consensus         2 ~~~~l~~r~~~~~~~g~~~~--------~P~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~~   72 (425)
T d1sffa_           2 SNKELMQRRSQAIPRGVGQI--------HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKL   72 (425)
T ss_dssp             CHHHHHHHHHHHSCTTBCCS--------EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTC
T ss_pred             chHHHHHHHHHhcCCCCCCC--------CCceEEEEecCEEEeCCCCEEEEcCcCHHhhcccC-CcHHHHHHHHHHHhhc
Confidence            35677888887777775432        588999999999994 99999999864   44565 4899999999999986


Q ss_pred             CCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhc
Q psy15447        111 GVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIAS  184 (457)
Q Consensus       111 ~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~  184 (457)
                      .+...    ....++...+++++|.+.++   .+.+++++||++|++.|++.   +.++.++|.....+|+.+...+.++
T Consensus        73 ~~~~~----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t  148 (425)
T d1sffa_          73 SHTCF----QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALT  148 (425)
T ss_dssp             SCCCT----TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHS
T ss_pred             CCccc----ccccCcHHHHHHHHHHhhhhhcccceeeeeccccchhhhHHHHhhhhhcccceEeecCCCcCccccchhhc
Confidence            54322    12357788999999999986   34678889999999999875   4578888889999999998888777


Q ss_pred             CCe-------------EEEecCC------C----HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hH
Q psy15447        185 RCK-------------VQYFKHN------N----MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LK  237 (457)
Q Consensus       185 g~~-------------~~~~~~~------d----~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~  237 (457)
                      +..             ....+.+      .    ....++.+....      ....+++|++||+++.+|.+.|    ++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~vaavi~EPi~g~~G~~~~~~~~l~  222 (425)
T d1sffa_         149 GKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA------APEDIAAIVIEPVQGEGGFYASSPAFMQ  222 (425)
T ss_dssp             SCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC------CGGGEEEEEECSBCTTTTSCBCCHHHHH
T ss_pred             CCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhcc------cccceEEEEecCccCCCCcccCCHHHHH
Confidence            521             1111111      1    112222222211      1257899999999999888765    89


Q ss_pred             HHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc
Q psy15447        238 DILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY  314 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~  314 (457)
                      +|+++|++||++||+||+++ +|+.|.  .+..+++|+.|   ||+  +++|++|+  +.|++++++++++.+....++.
T Consensus       223 ~l~~lc~~~gillI~DEV~tG~gR~g~--~~a~~~~gv~P---Di~--~~gK~l~gG~P~~av~~~~~i~~~~~~~~~~~  295 (425)
T d1sffa_         223 RLRALCDEHGIMLIADEVQSGAGRTGT--LFAMEQMGVAP---DLT--TFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGG  295 (425)
T ss_dssp             HHHHHHHHHTCEEEEECTTTTTTTTSS--SSGGGGTTSCC---SEE--EECGGGGTSSCCEEEEEEHHHHTTSCTTSBCC
T ss_pred             HHHHHHHHcCceEEeccccccCCCcch--hhHHHhcCCCc---cce--ecccccCCCcceEEEEEcHHHHHhhCCCCCCC
Confidence            99999999999999999986 455553  34568899988   777  79999963  4478899999988876655554


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLL  393 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~  393 (457)
                      +|+  .+|++|++++++|+++++.+ ..++++++.+++++.|+++....++.......+.++.+.+..+... ..+....
T Consensus       296 T~~--gnpl~~aaa~a~L~~i~~~~-~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~f~~~~~~~~~~~~~~  372 (425)
T d1sffa_         296 TYA--GNPIACVAALEVLKVFEQEN-LLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLT  372 (425)
T ss_dssp             SSS--SCHHHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSBCHHHH
T ss_pred             CCC--cCHHHHHHHHHHHHHHHHhh-hhhhhhhhhhhhhhhhhhhHhhCCceEEEEccccEEEEEEeccCccCCccHHHH
Confidence            454  59999999999999998764 7899999999999888664322222222234578888877543211 1122356


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ..+.++|+++|+++.+.+       ...+.+|++||+.+|++|||+++++++++++++++
T Consensus       373 ~~~~~~l~~~Gvl~~~~g-------~~~n~i~~~PpL~it~~eid~~l~~l~~al~eikk  425 (425)
T d1sffa_         373 AEIVARARDKGLILLSCG-------PYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAKQ  425 (425)
T ss_dssp             HHHHHHHHHTTEECEEES-------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHCCCEEeccC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            789999999999987653       22578999999999999999999999999999875

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=100.00  E-value=3.1e-43  Score=348.10  Aligned_cols=381  Identities=15%  Similarity=0.149  Sum_probs=285.2

Q ss_pred             ChhhHHHHHcccCCCCCCCccccc-cccCCceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHh
Q psy15447         35 HTINVDALINNWTPEPIVSKAEKF-KDVSSKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDK  109 (457)
Q Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~  109 (457)
                      .++++.+..+++.|.+...+.+.. ....+|.++++++|+|||+ |||+||||.++   ..+|+ +||+|.+|+++|+++
T Consensus         5 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~P~~i~~a~G~~l~D~~G~~ylD~~~~~~~~~lGh-~hp~i~~ai~~~~~~   83 (427)
T d2gsaa_           5 KSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGH-AHPEVIEALKVAMEK   83 (427)
T ss_dssp             HHHHHHHHHHHHSGGGSSSGGGCCTTTSSCCCCEEEEEBTEEEETTSCEEEESSGGGTTTTTCB-TCHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHhhcCCCCCCCccccccCCCCCcEEEEeecCEEEECCCCEEEEechhHHHHhccC-CcHHHHHHHHHHHHh
Confidence            367899999999998887655443 3445789999999999995 99999999775   34566 499999999999987


Q ss_pred             cCCCCCCCCCcccChHHHHHHHHHHHhhcC-CCcEEEecccHHHHHHHHHhh---cCCCCEEEEeCcccHHHHHHHHhcC
Q psy15447        110 NGVGSCGPRGFYGTNVVHLDLENDIASFMG-LEETALYSFGFSTSASAIAAY---VKRNDAVFVDENINFAIQTGLIASR  185 (457)
Q Consensus       110 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~~~i~~~sG~~a~~~ai~a~---~~~gd~v~~~~~~h~~~~~~~~~~g  185 (457)
                      .....       ........+++.+.+..+ .+.++|++||++|++.|++..   .++..+|..+..+|+.+..++.+++
T Consensus        84 ~~~~~-------~~~~~~~~la~~~~~~~~~~~~v~f~~sGseA~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~  156 (427)
T d2gsaa_          84 GTSFG-------APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAG  156 (427)
T ss_dssp             CSCCS-------SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCC
T ss_pred             cCccc-------cchhHHHHHHHHHHhhCCccccccccCCcHHHHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecC
Confidence            43221       134567778888888765 567788899999999999854   5777788889999987554332221


Q ss_pred             -------------------CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHH
Q psy15447        186 -------------------CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSL  242 (457)
Q Consensus       186 -------------------~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l  242 (457)
                                         .+...++++|++++++.+++..        .++++|++||+++.+|.+.|    +++|+++
T Consensus       157 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--------~~iaavi~Epi~g~~G~~~~~~~~l~~l~~l  228 (427)
T d2gsaa_         157 SGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENP--------GEIAGVILEPIVGNSGFIVPDAGFLEGLREI  228 (427)
T ss_dssp             HHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTST--------TTEEEEEECSSBCSSSCBCCCTTHHHHHHHH
T ss_pred             CcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCC--------CCeEEEEEcCCcCCCCCccCCHHHHHHHHHH
Confidence                               2456678899999999998643        57899999999999999887    9999999


Q ss_pred             HHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcc-eecCC
Q psy15447        243 RSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGY-CFSAS  319 (457)
Q Consensus       243 ~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~-~~~~~  319 (457)
                      |++||++||+||+++..+.|.  .+..+++|+.|   ||+  +++|++|+  +.|++++++++++.+....... ..|.+
T Consensus       229 c~~~~~llI~DEv~tG~r~g~--~~~~~~~gi~P---Di~--~~gK~lggG~p~~a~~~~~~i~~~~~~~~~~~~~~T~~  301 (427)
T d2gsaa_         229 TLEHDALLVFDEVMTGFRIAY--GGVQEKFGVTP---DLT--TLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLS  301 (427)
T ss_dssp             HHHTTCEEEEECTTTBTTTBT--TCHHHHTTCCC---SEE--EECGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTT
T ss_pred             HHHhceeeeeccccccceecc--cchHHhcCCCH---HHH--hhhhccCCCcceeeeeehHHHHHHhcccCCCcCCCCCC
Confidence            999999999999996434442  45668999988   787  79999953  4577889999988775433222 23345


Q ss_pred             CcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc-----h-HHHHHHH
Q psy15447        320 LPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD-----E-VASKKLL  393 (457)
Q Consensus       320 ~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~-~~~~~~~  393 (457)
                      .+|++|++++++|+++++.+ +.+++++++++|++.|+++....+........+.++.+.+.....     . ..+....
T Consensus       302 gnpla~AAala~Le~i~~~~-l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~ggm~~i~~~~~~v~~~~~~~~~d~~~~  380 (427)
T d2gsaa_         302 GNPLAMTAGIKTLELLRQPG-TYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKF  380 (427)
T ss_dssp             TCHHHHHHHHHHHHHHTSTT-HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHH
T ss_pred             CCchhhHHHHHhhHHhhhhh-HHhhhhHHHHHHHHHHHHHHhhcCCCcEEcccCCeEEEEEeccCCCCHHHhhcccHHHH
Confidence            79999999999999998754 789999999999999876432233222112234455665533210     0 1112244


Q ss_pred             HHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        394 QTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       394 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..+.+.|+++||++.+..+           .++.+++.||++|||++++++++++++
T Consensus       381 ~~~~~~ll~~Gv~l~p~~~-----------~~~~~~l~~Te~dId~~l~al~~al~~  426 (427)
T d2gsaa_         381 SRFHRGMLEQGIYLAPSQF-----------EAGFTSLAHTEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             HHHHHHHHHTTEECCSSTT-----------SCEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCEEECCCCC-----------cceeCCCCCCHHHHHHHHHHHHHHHHh
Confidence            6788999999999876542           234578999999999999999999865

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=100.00  E-value=3.5e-42  Score=338.24  Aligned_cols=348  Identities=17%  Similarity=0.168  Sum_probs=260.0

Q ss_pred             CceeeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|.|||+ |||+||||.++   ..+|+ +||+|.+|+.+|++++++.+..     ........+++.+.++.
T Consensus        21 ~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~~-----~~~~~~~~~~~~~~~~~   94 (404)
T d1z7da1          21 IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGH-CHPNILNAMINQAKNLTICSRA-----FFSVPLGICERYLTNLL   94 (404)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCB-TCHHHHHHHHHHHTTCSCCCTT-----SEEHHHHHHHHHHHHHH
T ss_pred             CCceEEEeecCEEEECCCCEEEEccccHHHHhhhc-CcHHHHHHHHHHHHhCCCcccc-----cchHHHHHHHHhhhhcc
Confidence            588999999999995 99999999764   34555 4999999999999987654321     14567788888899999


Q ss_pred             CCCcEEEecccHHHHHHHHHhhc-----------CCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCC
Q psy15447        139 GLEETALYSFGFSTSASAIAAYV-----------KRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNN  195 (457)
Q Consensus       139 g~~~~i~~~sG~~a~~~ai~a~~-----------~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d  195 (457)
                      +.+.+.+++||++|+..+++...           ....++.....+|+.+.......+            .....++.++
T Consensus        95 ~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (404)
T d1z7da1          95 GYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDD  174 (404)
T ss_dssp             TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTC
T ss_pred             ccceeeeeccccchHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccch
Confidence            99999999999999999987542           122466677778887665554443            2344566778


Q ss_pred             HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCcccc
Q psy15447        196 MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTE  270 (457)
Q Consensus       196 ~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~  270 (457)
                      .+.++..+..          +++++|++||+++++|.+.|    +++|+++|++||++||+||+++ +|+.|.  .+..+
T Consensus       175 ~~~l~~~~~~----------~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~--~~~~e  242 (404)
T d1z7da1         175 LEALEEELKD----------PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK--LLCVH  242 (404)
T ss_dssp             HHHHHHHHTS----------TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SSGGG
T ss_pred             HHHHHHHhcC----------CCEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCcccc--ccccc
Confidence            8888776643          57899999999999998877    8999999999999999999985 555443  34568


Q ss_pred             ccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLRE  347 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~  347 (457)
                      ++|+.|   ||+  +++|++|.   +.|++++++++++.++...++.+|+  .+|++|++++++|+++++++ ..+++.+
T Consensus       243 ~~gv~P---Div--t~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~--gnpl~~aaa~a~L~~~~~~~-~~~~~~~  314 (404)
T d1z7da1         243 HYNVKP---DVI--LLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYG--GNPLAASICVEALNVLINEK-LCENAEK  314 (404)
T ss_dssp             GGTCCC---SEE--EECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTT--TCHHHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred             ccCCCC---CEE--EEcccccCCCCCcccccchHHHHccCCCCCcCcCCC--CCcchhhhhhhhhhhhhcch-hhhhhcc
Confidence            899988   787  89999963   4688999999988776655444444  59999999999999987764 6778888


Q ss_pred             HHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE
Q psy15447        348 KCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT  427 (457)
Q Consensus       348 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~  427 (457)
                      +.+++.+.|.+.....++....+..+.++.+.+.++..      ...+++++|.++|+++.+..         .+.+||+
T Consensus       315 ~~~~~~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~------~~~~~~~~l~~~Gl~~~~~~---------~~~ir~~  379 (404)
T d1z7da1         315 LGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELV------NVLDICLKLKENGLITRDVH---------DKTIRLT  379 (404)
T ss_dssp             HHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTC------CHHHHHHHHHHTTEECCEET---------TTEEEEC
T ss_pred             chhHHHHHHHHHHhcCCCeEEEEeeCcEEEEEEcCCcc------cHHHHHHHHHhCCeEEecCC---------CCEEEEE
Confidence            77777776654221122211123457888888876531      34578899999999986543         4789999


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        428 CNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       428 ~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      |++.+|++|||+++++|+++++++
T Consensus       380 Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         380 PPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999875

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.4e-42  Score=332.99  Aligned_cols=340  Identities=15%  Similarity=0.135  Sum_probs=269.8

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|++|++++|+|+| .|||+||||.++   ..+|+ +||+|.+|+.+|+++....+.   .  ..++...++++++.+..
T Consensus        19 ~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh-~hp~v~~a~~~~~~~~~~~~~---~--~~~~~~~~la~~l~~~~   92 (387)
T d1vefa1          19 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGH-GNPEVVEAVKRQAETLMAMPQ---T--LPTPMRGEFYRTLTAIL   92 (387)
T ss_dssp             CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCT---T--SCCHHHHHHHHHHHHTS
T ss_pred             CCceEEEeEcCEEEECCCCEEEEcchhHHhhhhcC-CcHHHHHHHHHHHHhhccccc---c--cCCchHHHHHHHhhhhc
Confidence            58899999999999 499999999763   44666 499999999999998543221   1  14677788888888876


Q ss_pred             CCC--cEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcC------------CeEEEecCCCHHHHHH
Q psy15447        139 GLE--ETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASR------------CKVQYFKHNNMQHLEE  201 (457)
Q Consensus       139 g~~--~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g------------~~~~~~~~~d~~~le~  201 (457)
                      +..  ++++++||++|++.|++.   +.++..+|.....+|+.+..+..+++            .++..+|+||.++|++
T Consensus        93 ~~~~~~v~f~~sGseA~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~~d~~~l~~  172 (387)
T d1vefa1          93 PPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKR  172 (387)
T ss_dssp             CTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHH
T ss_pred             cccceeeccccCchHHHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCCCCHHHHHH
Confidence            544  678899999999999976   46788888889999999888887775            2466789999999988


Q ss_pred             HHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-cccccCCCCccccccCCCC
Q psy15447        202 LLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       202 ~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~  276 (457)
                      .++           +.+++|++||+++.+|.+.|    +++|+++|++||++||+||+++ +|++|.  .+..+++|+.|
T Consensus       173 ~~~-----------~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~--~~~~~~~~v~P  239 (387)
T d1vefa1         173 AVD-----------EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--RFAFEHFGIVP  239 (387)
T ss_dssp             HCC-----------TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SSTHHHHTCCC
T ss_pred             hcC-----------CCeEEEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCC--CcccccCCcCC
Confidence            874           36789999999999998866    9999999999999999999985 555543  23558899988


Q ss_pred             CCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                         ||+  +++|++|+  +.+.+++.+++++.+....++.+|+  .+|++|++++++|+.+++. +..++++++.+++++
T Consensus       240 ---Di~--~~gK~l~gG~~~~~~~~~~~~~~~~~~~~~g~T~~--gnPla~aaa~a~L~~l~~~-~~~~~v~~~g~~l~~  311 (387)
T d1vefa1         240 ---DIL--TLAKALGGGVPLGVAVMREEVARSMPKGGHGTTFG--GNPLAMAAGVAAIRYLERT-RLWERAAELGPWFME  311 (387)
T ss_dssp             ---SEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTSSCCSST--TCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHH
T ss_pred             ---cee--eecccCCCCccccccccceeeeeccccCCccccCC--CCcchhhhcccchhhcccc-cccchHhhhhHHHHH
Confidence               787  79999963  3366778888887776555555554  4999999999999999764 478999999999999


Q ss_pred             HhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCH
Q psy15447        355 LLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTE  434 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~  434 (457)
                      .|++++. +.+.-+ +..+.+..+.+.++.        ...+.+.++++|+++.+..         ++.+|++|++.+|+
T Consensus       312 ~L~~l~~-~~v~~v-rg~Gl~~~ie~~~~~--------~~~~~~~~~~~g~l~~~~g---------~~~ir~~Ppl~it~  372 (387)
T d1vefa1         312 KLRAIPS-PKIREV-RGMGLMVGLELKEKA--------APYIARLEKEHRVLALQAG---------PTVIRFLPPLVIEK  372 (387)
T ss_dssp             HHHTSCC-TTEEEE-EEETTEEEEEESSCS--------HHHHHHHHHHHCEECEESS---------TTEEEECCCTTCCH
T ss_pred             HHHhcCC-CceEEE-eecceEEEEEEeCCc--------hHHHHHHHHHCCCeEEecC---------CCEEEEECCccCCH
Confidence            9988542 233211 345778888887653        3457777888998876433         47899999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy15447        435 QDMNSLIETLCKSH  448 (457)
Q Consensus       435 edi~~~~~~l~~~~  448 (457)
                      +|||++++++++++
T Consensus       373 ~~ld~~~~~i~~aL  386 (387)
T d1vefa1         373 EDLERVVEAVRAVL  386 (387)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999886

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.2e-41  Score=332.16  Aligned_cols=367  Identities=12%  Similarity=0.081  Sum_probs=272.3

Q ss_pred             cCCCCCCCccccccccCCce-eeecCCCcEEEE-CCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCc
Q psy15447         46 WTPEPIVSKAEKFKDVSSKY-VVDQKSGYIVNI-NGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF  120 (457)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~-~i~~~~g~~~~~-~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~  120 (457)
                      |..+++|++.+..... .|+ .+++++|.|||+ |||+||||.++   ..+|+ +||+|.+|+.+|+++..+... +   
T Consensus         8 ~d~~h~~~p~~~~~~~-~p~~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~-~---   81 (429)
T d1s0aa_           8 FDQRHILHPFTSMTSP-LPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQIDAMSHVMF-G---   81 (429)
T ss_dssp             HHHHHBCCTTCCSSSC-CCCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHHCSCCCC-S---
T ss_pred             HHHHhcCCCcccCCCC-CCCcceEEeECCEEEECCCCEEEECcccHHHHhhcC-CcHHHHHHHHHHHHhcCCccc-C---
Confidence            3334455554443211 344 488999999995 99999999775   23455 489999999999998654221 1   


Q ss_pred             ccChHHHHHHHHHHHhhcC--CCcEEEecccHHHHHHHHHhhc--------CCCCEEEEeCcccHHHHHHHHhcCCe---
Q psy15447        121 YGTNVVHLDLENDIASFMG--LEETALYSFGFSTSASAIAAYV--------KRNDAVFVDENINFAIQTGLIASRCK---  187 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g--~~~~i~~~sG~~a~~~ai~a~~--------~~gd~v~~~~~~h~~~~~~~~~~g~~---  187 (457)
                      ...++...++.+++.+..+  .+++++.+||++|++.|++...        .+.++|.....+|+.+..++.+++..   
T Consensus        82 ~~~~~~~~~l~~~l~~~~~~~~~~v~f~~sGseA~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~  161 (429)
T d1s0aa_          82 GITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSM  161 (429)
T ss_dssp             SEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTT
T ss_pred             CccchHHHHHHHHHHhhhccCcceeeeccccccchhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCcccc
Confidence            1246778888899888764  5678899999999999987643        23467888899999998887776521   


Q ss_pred             ----------EEEec-----------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCC-C---hHHHHH
Q psy15447        188 ----------VQYFK-----------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADIC-P---LKDILS  241 (457)
Q Consensus       188 ----------~~~~~-----------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~-~---l~~i~~  241 (457)
                                ....+           .++.+++++.+.+..        +.+++|++||+... +|.+. |   +++|++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~iaavivEPi~~~~gg~~~~~~~fl~~lr~  233 (429)
T d1s0aa_         162 HSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR--------HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK  233 (429)
T ss_dssp             GGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHT--------TTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred             ccccCccccccccccccccccccccchhhhhhhhhhhhhcC--------CccceeeecceeccCCCccCCCHHHHHHHHH
Confidence                      11111           124566666665543        67899999999854 44543 3   899999


Q ss_pred             HHHHcCcEEEEEcCcc-cccccCCCCccccccCCCCCCccEEEecCcccccC---cccEEEecHHHHHHHHhhC-Cc--c
Q psy15447        242 LRSKYQARIFVDESVS-FGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS---VGGFCVGSSYIIEHHRLSG-SG--Y  314 (457)
Q Consensus       242 l~~~~g~~li~DEa~~-~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~---~gG~v~~~~~~~~~~~~~~-~~--~  314 (457)
                      +|++||++||+||+++ +|++|.  .+..+++|+.|   ||+  +++|+++.   +.+++++++++.+.+.... ..  +
T Consensus       234 lc~~~gillI~DEV~tGfGRtG~--~~~~~~~~v~P---Di~--~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~  306 (429)
T d1s0aa_         234 ICDREGILLIADEIATGFGRTGK--LFACEHAEIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMH  306 (429)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSS--SSGGGGGTCCC---SEE--EECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSC
T ss_pred             HHHHcCcceehhhcccccccccc--ccccccceecc---ccc--ccccccccccccccchhhHHHHHhccCCCCCcceee
Confidence            9999999999999985 555553  34568899988   787  79999953   4578899999998876432 11  2


Q ss_pred             eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHH
Q psy15447        315 CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQ  394 (457)
Q Consensus       315 ~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  394 (457)
                      ..+.+.+|++|++++++|++++++ ++.+++++++++|++.|+++...+.+.-+ +..+.+..+.+..+.       ...
T Consensus       307 ~~T~~gnp~~~aaa~a~L~~i~~~-~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-rg~Gl~~~~e~~~~~-------~~~  377 (429)
T d1s0aa_         307 GPTFMGNPLACAAANASLAILESG-DWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHPV-------NMA  377 (429)
T ss_dssp             CCTTTTCHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSCB-------CHH
T ss_pred             cCCCCCCcccchhhhccccccccc-cccchhhHHHHHHHHHHHHhccCCceEEE-eecccEEEEEecCcc-------cHH
Confidence            234446999999999999999765 58999999999999999886544444321 345778888887765       456


Q ss_pred             HHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        395 TICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       395 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ++.+.|+++|+++.+.          .+.+|++|++.+|++|||+++++|++++++..
T Consensus       378 ~~~~~~~~~Gl~~~~~----------g~~i~~~Ppl~it~~eid~~~~~l~~al~e~~  425 (429)
T d1s0aa_         378 ALQKFFVEQGVWIRPF----------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDET  425 (429)
T ss_dssp             HHHHHHHHTTEECCCB----------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSGG
T ss_pred             HHHHHHHHCCcEEEec----------CCEEEEeCCcCCCHHHHHHHHHHHHHHHHhhh
Confidence            7999999999998653          37899999999999999999999999987653

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=100.00  E-value=1.9e-41  Score=336.26  Aligned_cols=363  Identities=15%  Similarity=0.147  Sum_probs=267.6

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+||| .|||+||||.++   ..+|+ +||+|.+|+.+|++++++....     ..++...+|+++|++..
T Consensus        23 ~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~~~la~~L~~~~   96 (431)
T d1zoda1          23 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLFSE-----MLSRPVVDLATRLANIT   96 (431)
T ss_dssp             CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCTT-----CCCHHHHHHHHHHHHHS
T ss_pred             CCCeEEEeecCEEEECCCCEEEEcccCHHhhhhcC-CCHHHHHHHHHHHhhccccccc-----cccHHHHHHHHHHHHhC
Confidence            48899999999999 599999999763   45666 4899999999999997643221     24677889999999987


Q ss_pred             --CCCcEEEecccHHHHHHHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCe-----------EEEecCC--------
Q psy15447        139 --GLEETALYSFGFSTSASAIAA---YVKRNDAVFVDENINFAIQTGLIASRCK-----------VQYFKHN--------  194 (457)
Q Consensus       139 --g~~~~i~~~sG~~a~~~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~-----------~~~~~~~--------  194 (457)
                        +.++++|++||++|++.|++.   ++++..++..+..+|+.+...+..++..           ...++..        
T Consensus        97 ~~~~~~v~f~~sGseA~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (431)
T d1zoda1          97 PPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFE  176 (431)
T ss_dssp             CTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCE
T ss_pred             CcccceeeecccccchHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccc
Confidence              568899999999999999986   4678888889999999988777765421           1111110        


Q ss_pred             ------CH---HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC----hHHHHHHHHHcCcEEEEEcCcc-ccc
Q psy15447        195 ------NM---QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP----LKDILSLRSKYQARIFVDESVS-FGT  260 (457)
Q Consensus       195 ------d~---~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~----l~~i~~l~~~~g~~li~DEa~~-~g~  260 (457)
                            +.   +.++..+....       ++++++|++||+++.+|.+.|    +++|+++|++||++||+||+++ +|+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~-------~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gR  249 (431)
T d1zoda1         177 RNGAYDYLAELDYAFDLIDRQS-------SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR  249 (431)
T ss_dssp             ETTEECHHHHHHHHHHHHHHHC-------CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred             cccchhhhhhHHHHHHHHHHhc-------cccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccc
Confidence                  12   33333333322       367899999999998888765    8999999999999999999986 455


Q ss_pred             ccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhC
Q psy15447        261 LGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKAN  338 (457)
Q Consensus       261 ~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~  338 (457)
                      +|.  .+..+++|+.|   ||+  +++|++|+  +-+.+++++++++........+..+.+.+|++|+++.+++++++++
T Consensus       250 tG~--~~~~~~~gv~P---Di~--~~gK~l~gG~p~~av~~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~  322 (431)
T d1zoda1         250 TGT--MFACQRDGVTP---DIL--TLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRD  322 (431)
T ss_dssp             TSS--SSTHHHHTCCC---SEE--EECHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHT
T ss_pred             ccc--ccccccCCCCc---chh--ccccccccccccceeeeeecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhh
Confidence            553  34568899988   787  79999953  3466777787777765544333445567999999999999998876


Q ss_pred             cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCcccc
Q psy15447        339 PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEA  417 (457)
Q Consensus       339 ~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~  417 (457)
                      + ..++..++.+++.+.+.++....++....+..+.++.+.+..+... ........++.+.|+++|++......     
T Consensus       323 ~-~~~~~~~~g~~l~~~l~~~~~~~~~i~~vrG~Glm~~ie~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~-----  396 (431)
T d1zoda1         323 G-LVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL-----  396 (431)
T ss_dssp             T-HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC-----
T ss_pred             h-hhHHHHHHHHHHhhhhhhhhhcCCCeEEEeecceEEEEEEecCCcccCccHHHHHHHHHHHHHhCcccCeeee-----
Confidence            4 7888888888888877653222232222234577877776432111 11111456789999999987543222     


Q ss_pred             CCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        418 KKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       418 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +..++.+|++|++.+|++|||+++++|+++++++
T Consensus       397 ~~~~~~i~l~Ppl~it~~eid~~~~~l~~al~~v  430 (431)
T d1zoda1         397 PGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA  430 (431)
T ss_dssp             TTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            2336799999999999999999999999999876

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.3e-39  Score=322.84  Aligned_cols=354  Identities=12%  Similarity=0.118  Sum_probs=255.5

Q ss_pred             CceeeecCCCcEEE-ECCeeeEEeecC---CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhc
Q psy15447         63 SKYVVDQKSGYIVN-INGIPCINFATH---NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFM  138 (457)
Q Consensus        63 ~~~~i~~~~g~~~~-~~G~~~id~~s~---~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  138 (457)
                      .|+++++++|+|+| .|||+||||.++   ..+|++ ||+|.+|+.+|+++..+.+.............++|+++|.+..
T Consensus        35 ~p~~~~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh~-~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~  113 (461)
T d1ohwa_          35 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYS-HPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVA  113 (461)
T ss_dssp             CCBCTTTCBBTEEEBTTSCEEEESSHHHHTCSSCBT-CHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGC
T ss_pred             CCeEEEEeecCEEEECCCCEEEEcccCHHHHhhcCC-cHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhh
Confidence            47889999999999 599999999764   345664 8999999999988744211111011113445667777777765


Q ss_pred             C--CCcEEEecccHHHHHHHHHhhc-----------------------------CCCCEEEEeCcccHHHHHHHHhcCCe
Q psy15447        139 G--LEETALYSFGFSTSASAIAAYV-----------------------------KRNDAVFVDENINFAIQTGLIASRCK  187 (457)
Q Consensus       139 g--~~~~i~~~sG~~a~~~ai~a~~-----------------------------~~gd~v~~~~~~h~~~~~~~~~~g~~  187 (457)
                      +  .+++++++||++|++.|++...                             ++..+|.....+|+.+..++.+++.+
T Consensus       114 ~~~~~~v~f~~sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~  193 (461)
T d1ohwa_         114 PKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK  193 (461)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSC
T ss_pred             ccCcceeeeecchhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCc
Confidence            4  5688999999999999998642                             12246778899999999888887642


Q ss_pred             E-------------EEecC-----------------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC--
Q psy15447        188 V-------------QYFKH-----------------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP--  235 (457)
Q Consensus       188 ~-------------~~~~~-----------------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~--  235 (457)
                      .             ..++.                 ++.+++++.+.....     .++.+++|++||+++..|.+.|  
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~iAavivEPi~g~~G~~~~~~  268 (461)
T d1ohwa_         194 AIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRK-----KKKTVAGIIVEPIQSEGGDNHASD  268 (461)
T ss_dssp             HHHHTTCCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHH-----TTCCEEEEEECSSBCTTTCBCCCH
T ss_pred             ccccccccccCCcccccccccccccccccccchhhhhhHHHHHHHHHHHHh-----CCCccceeeeccccccccccCchh
Confidence            1             11111                 123455666544321     1367899999999999888765  


Q ss_pred             --hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcccEEEecHHHHHHHHhhCC
Q psy15447        236 --LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVGGFCVGSSYIIEHHRLSGS  312 (457)
Q Consensus       236 --l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~gG~v~~~~~~~~~~~~~~~  312 (457)
                        +++|+++|++||++||+||+++.  +|++|.+ ..+++|+.+ .+||+  +++|+++  ||++.....+.. ..... 
T Consensus       269 ~fl~~lr~lc~~~gillI~DEV~tG--~gRtG~~~~~e~~gi~~-~PDiv--~~gK~l~--~g~~~~~~~~~~-~~~~~-  339 (461)
T d1ohwa_         269 DFFRKLRDISRKHGCAFLVDEVQTG--GGSTGKFWAHEHWGLDD-PADVM--TFSKKMM--TGGFFHKEEFRP-NAPYR-  339 (461)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTTC--SSTTSSSSGGGGGCCSS-CCSEE--EECGGGS--SEEEEECGGGSC-SSTTS-
T ss_pred             hHHHHHHHHHHhhCcceeccccccc--ccccccccccccccccc-Cchhh--hhhhccc--cccccccccccc-ccccc-
Confidence              89999999999999999999853  3445554 458889852 34888  8999986  455554443321 11112 


Q ss_pred             cceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccc-cCC-e-EEeccCCCCeEEEEecCCcchHHH
Q psy15447        313 GYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKV-TQR-F-LVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       313 ~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~-~~~-~-~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                       +..+.+.+|++|++++++|++++++ .+.+++++++++|.+.|+++.. .+. + ++  +..+.++.+.+.++.     
T Consensus       340 -~~~T~~g~p~~~aaa~a~l~~i~~~-~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~v--rG~Gl~~~ie~~~~~-----  410 (461)
T d1ohwa_         340 -IFNTWLGDPSKNLLLAEVINIIKRE-DLLSNAAHAGKVLLTGLLDLQARYPQFISRV--RGRGTFCSFDTPDES-----  410 (461)
T ss_dssp             -SCCSCSSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHHHCTTTCEEE--EEETTEEEEECSSHH-----
T ss_pred             -cccccccccccchhhcccchhhhhh-hHHHHHHHHHHHHHHHHHHHHhhCCCceEEe--eeeeEEEEEEcCCHH-----
Confidence             2233446999999999999999876 4889999999999999987432 122 2 22  345788888887654     


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                        ...++++.|+++|+++.+..         ++.|||.|++.+|++|+|+++++|++++++.
T Consensus       411 --~~~~i~~~~~~~Gll~~~~~---------~~~ir~~PpL~it~~eid~~~~~l~~~l~ef  461 (461)
T d1ohwa_         411 --IRNKLISIARNKGVMLGGCG---------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF  461 (461)
T ss_dssp             --HHHHHHHHHHHTTEECEEET---------TTEEECCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHCCeEEeeCC---------CCEEEEeCCcCCCHHHHHHHHHHHHHHHhcC
Confidence              66789999999999987643         4789999999999999999999999998763

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.98  E-value=1.5e-30  Score=254.43  Aligned_cols=339  Identities=12%  Similarity=0.118  Sum_probs=242.3

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      +|+++|||+.+++ ++..++.+++|+.+.+++ +..  ++....|..++.+.+++.+.+..|.    +++++++++++++
T Consensus        28 ~g~~vi~l~~G~p-~~~~p~~v~~a~~~~~~~-~~~--~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~it~G~~~al  103 (388)
T d1j32a_          28 EGIDVCSFSAGEP-DFNTPKHIVEAAKAALEQ-GKT--RYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI  103 (388)
T ss_dssp             TTCCCEECCCSSC-SSCCCHHHHHHHHHHHHT-TCC--SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred             CCCCeEECCCCCC-CCCCCHHHHHHHHHHHhc-CCC--CCCCCCCCHHHHHHHHHHHHHhcccCCCCceEEEcCCHHHHH
Confidence            5789999998775 666678999999999875 321  2222345666666666666666553    3456666667999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..+...+...+..++.++.       .|++++++.+.           ++++++++.++
T Consensus       104 ~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~~~~~~P  172 (388)
T d1j32a_         104 FNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT-----------PKTKLLVFNTP  172 (388)
T ss_dssp             HHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC-----------TTEEEEEEESS
T ss_pred             HHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-----------CCCeEEEECCC
Confidence            9999999999999999999999998888888888877764       26788877664           34567778888


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC--CccEEEecCcccccCcc---cEEE
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE--EVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~--~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      +||||.+.+   +++|.++|++||+++|+||+|+...++......  .....++  +..|++.|+||.++.+|   ||++
T Consensus       173 ~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s--~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~  250 (388)
T d1j32a_         173 SNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLS--IGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA  250 (388)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC--GGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred             CCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCC--HHHhCcccccceeEecCChhhhhcchhHeEEEE
Confidence            999999988   678888999999999999999766554322111  1111111  23588999999998665   9999


Q ss_pred             ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        299 GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++++.+.......  ....+.....++...+...++ ..+.++.++++.+.+.+.|++   ..|+.+..+..+.++|
T Consensus       251 ~~~~~~~~~~~~~~~~--~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~g~~~~~p~gg~~l~  325 (388)
T d1j32a_         251 GPVPLVKAATKIQGHS--TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNA---MPGLECPKPDGAFYMF  325 (388)
T ss_dssp             CCHHHHHHHHHHHHTT--TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHT---CTTCBCCCCCBTTEEC
T ss_pred             ECHHHHHHHHHhhhhc--cccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEecCCCceEEEE
Confidence            9999988775432111  122345554544444432111 134567788888899999987   5677776566677888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+.....      ...+++++|+ ++||.+.|+..+     ..++++|++++  .++++++++++.|+++++.+
T Consensus       326 ~~l~~~~~------~~~~~~~~ll~~~gV~v~pG~~F-----~~~~~~Rls~~--~~~e~l~~al~rl~~~l~~l  387 (388)
T d1j32a_         326 PSIAKTGR------SSLDFCSELLDQHQVATVPGAAF-----GADDCIRLSYA--TDLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             CBCGGGTC------CHHHHHHHHHHHHCEECEEGGGG-----TCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCC------CHHHHHHHHHHhCCEEEEecccc-----CCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence            77654210      3346777776 469999987653     34689999986  58999999999999998765

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=4.7e-30  Score=250.56  Aligned_cols=332  Identities=13%  Similarity=0.101  Sum_probs=236.6

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      +|+++|||+.+++ ++..+|++++++.+.+++-..+   +....|..++++++++.+.+..|    .+++++++++++|+
T Consensus        29 ~G~~vi~l~~g~p-~~~~p~~i~~a~~~~~~~~~~~---Y~~~~G~~~lR~~ia~~~~~~~~~~~~~~~i~it~G~~~al  104 (382)
T d1b5pa_          29 QGVDLVALTAGEP-DFDTPEHVKEAARRALAQGKTK---YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQAL  104 (382)
T ss_dssp             TTCCCEECCCSSC-SSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHH
T ss_pred             CCCCeEECCCCCC-CCCCCHHHHHHHHHHHhcCCcC---CCCCCCCHHHHHHHHhhhhhhcccccccccceecCCHHHHH
Confidence            5789999998775 5666789999999998762222   33334566666666666655545    24567677778999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..+...++..|..+..++..       |++++++.+.           ++++++++.++
T Consensus       105 ~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~~~~P  173 (382)
T d1b5pa_         105 FNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-----------PRTKALVVNSP  173 (382)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC-----------TTEEEEEEESS
T ss_pred             HHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC-----------CCCeEEEECCC
Confidence            99999999999999999999999999999999998887632       6666665543           35577778888


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +||||.+.+   +++|.++|++||+++|.||+|+...+...  ...... ..+++ .|+++|+||.++.+|   ||++++
T Consensus       174 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~-~~~~~-~i~~~s~SK~~~~~GlR~G~~~~~  249 (382)
T d1b5pa_         174 NNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE--HFSPGR-VAPEH-TLTVNGAAKAFAMTGWRIGYACGP  249 (382)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC--CCCGGG-TCTTT-EEEEEESTTTTTCGGGCCEEEECC
T ss_pred             CCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCC--CCCHHH-cCCCC-EEEEecchhhccCcHhheEEEEEC
Confidence            999999988   77899999999999999999986555322  111111 22344 588999999998665   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH---HHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALH---LLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLK  376 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~---~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  376 (457)
                      +++++.+.........+  .+.....++.+.+.   ..+. ....++.++++.+.+.+.+.+    .|+.+..+.++.++
T Consensus       250 ~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~p~gg~~~  323 (382)
T d1b5pa_         250 KEVIKAMASVSRQSTTS--PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA----LGLKAVRPSGAFYV  323 (382)
T ss_dssp             HHHHHHHHHHHHTTTCS--CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HTCCBCCCSBTTEE
T ss_pred             HHHHHHHHHHHHhcccC--cccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhh----cCCeEecCCceEEE
Confidence            99888775432222222  23333223222221   1111 123556677778888888877    67777656668888


Q ss_pred             EEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        377 YLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       377 ~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      |+.+.....      +...+.+.|.++||.+.|+..+     ...+++|+++.  .+++++++++++|+++
T Consensus       324 ~~~~~~~~~------~~~~~~~~l~e~gV~v~PG~~F-----~~~~~iRis~~--~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         324 LMDTSPIAP------DEVRAAERLLEAGVAVVPGTDF-----AAFGHVRLSYA--TSEENLRKALERFARV  381 (382)
T ss_dssp             EEECTTTCS------SHHHHHHHHHHTTEECEESGGG-----TCTTEEEEECC--SCHHHHHHHHHHGGGG
T ss_pred             eEeCCCCCC------CHHHHHHHHHHCCEEEEeCccc-----CCCCeEEEEEc--CCHHHHHHHHHHHHHh
Confidence            888754210      3456788899999999988653     44689999985  4889999999988765

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.97  E-value=9e-30  Score=249.12  Aligned_cols=340  Identities=13%  Similarity=0.132  Sum_probs=237.4

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC-----CCcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG-----LEETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-----~~~~i~~~sG~~a~  153 (457)
                      ++.+|||+.+++ ++..++.+++++.+++++-..+   +....|..++.+++++.+.+..+     .+.+++++++++++
T Consensus        24 ~~dvi~l~~g~p-~~~~p~~v~~~~~~a~~~~~~~---Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l   99 (388)
T d1gdea_          24 MKDVISLGIGEP-DFDTPQHIKEYAKEALDKGLTH---YGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAF   99 (388)
T ss_dssp             CTTCEECCCCSC-CSCCCHHHHHHHHHHHHTTCCS---CCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHH
T ss_pred             CCCeEECCCCCC-CCCCCHHHHHHHHHHHhcCccC---CCCCcCCHHHHHHHHHHHHhhccccCCChheeeeccCcchHH
Confidence            356899987765 6666789999999998762112   22233555555555555544333     23456666777899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|+++.++|..+...++..|.++..++..       |+++|++.++           ++++++++.++
T Consensus       100 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~~~~P  168 (388)
T d1gdea_         100 LMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT-----------DKTRALIINSP  168 (388)
T ss_dssp             HHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC-----------TTEEEEEEESS
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCc-----------cCCeEEEECCC
Confidence            99999999999999999999999999999999998887642       6788877664           34578888889


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +||+|.+.+   +++|.++|++||+++|+||+|+...++.............+ +..|+++||||.+|.+|   ||++++
T Consensus       169 ~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~ii~~  247 (388)
T d1gdea_         169 CNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMF-ERTITVNGFSKTFAMTGWRLGFVAAP  247 (388)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCG-GGEEEEEESTTTTTCGGGCCEEEECC
T ss_pred             cCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCC-CeEEEEeCChhhccCccccEEEEEee
Confidence            999999988   67899999999999999999986655432222211122112 23589999999998665   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHH---HHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALH---LLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKY  377 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~---~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  377 (457)
                      +++++.+.........  ..+.....++.++++   ..+.....++.++++...+.+.|..    .++.+..+.++.++|
T Consensus       248 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg~fl~  321 (388)
T d1gdea_         248 SWIIERMVKFQMYNAT--CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNE----MGLPTVKPKGAFYIF  321 (388)
T ss_dssp             HHHHHHHHHHHHTTTC--SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCCCCCCBTTEEC
T ss_pred             ccchhhhhhccccccc--cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhh----ccccccCCCceEEEE
Confidence            9888877654322222  224444344434432   1111223556667777788888877    566665556677888


Q ss_pred             EEecCC-cchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        378 LYLQKS-DDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       378 i~~~~~-~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      +.+.+. .       ...+++++|++ +||.+.|+..+.   ..+++++|++++  .+++++++++++|++++++.+
T Consensus       322 ~~l~~~~~-------~~~~~~~~ll~e~gV~v~PG~~F~---~~~~~~iRis~~--~~~e~l~~al~rL~~~l~e~k  386 (388)
T d1gdea_         322 PRIRDTGL-------TSKKFSELMLKEARVAVVPGSAFG---KAGEGYVRISYA--TAYEKLEEAMDRMERVLKERK  386 (388)
T ss_dssp             CBCGGGTC-------CHHHHHHHHHHHTCEECEEGGGGC---GGGTTBEEEECC--SCHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCCCC-------CHHHHHHHHHHhCCEEEEechhhC---CCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhcC
Confidence            877642 2       34567777664 599999876532   123678999986  588999999999999988753

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.97  E-value=9.8e-30  Score=246.47  Aligned_cols=298  Identities=10%  Similarity=0.128  Sum_probs=207.1

Q ss_pred             HHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHH
Q psy15447        125 VVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQ  197 (457)
Q Consensus       125 ~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~  197 (457)
                      +.++.+++++|+++|.+.++++++|++|+..++.+++++||.|+++.++|.+...++...|.++..++++       |++
T Consensus        47 ~l~~~~~~~~A~~~g~e~~~~t~g~t~a~~~~~~al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~  126 (364)
T d2e7ja1          47 PIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPE  126 (364)
T ss_dssp             CHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHH
T ss_pred             HHHHHHHHHHHHHhCcCEEEEECcHHHHHHHHHHHHhCCCcEEEeecccccccchHHHhccceEEEeeeccccccccCHH
Confidence            4788899999999999999999999999999999999999999999999999999999999999988764       589


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      ++++.+++...      ...+++|++++++|++|.+.|+++|.++|++||+++|+|++|++|.++...    ..+     
T Consensus       127 ~l~~~i~~~~k------~~~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~~~~~~----~~~-----  191 (364)
T d2e7ja1         127 NFAQTIEETKK------RGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSL----KEI-----  191 (364)
T ss_dssp             HHHHHHHHHTT------TSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCH----HHH-----
T ss_pred             HHHhhhhhhcc------cCCceEEEeecCCCCCceeecchhheeccccccchhhccccchhhhhhhcc----ccc-----
Confidence            99999987542      245678999999999999999999999999999999999999877654211    112     


Q ss_pred             CccEEEecCcccccCcc--cEEEecHHHHHHHHhhCCcce------ecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGSGYC------FSASLPPFLAVAANKALHLLKANPSLLTKLREKC  349 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~  349 (457)
                      ++|++++|++|++|++|  |++++++++++.+......+.      .+...+.....+..++++...+.-+...+..++.
T Consensus       192 g~D~~~~S~~K~~~~~g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  271 (364)
T d2e7ja1         192 GADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKA  271 (364)
T ss_dssp             TCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred             ccceeeeccccccCCCCCEEEEEECHHHHHHHHhhccccCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34899999999998654  889998887766533222111      1111122222333445544433212233444677


Q ss_pred             HHHHHHhhcccccCCeEEeccC--CCCeEEEEecCCcch-HHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEE
Q psy15447        350 NTMHSLLSQHKVTQRFLVQGHR--DTPLKYLYLQKSDDE-VASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRI  426 (457)
Q Consensus       350 ~~l~~~L~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi  426 (457)
                      +++.+.|++    .|+......  ......+......+. .........+...+.++|+......        ....+|+
T Consensus       272 ~~~~~~l~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g--------~~~~~~~  339 (364)
T d2e7ja1         272 RRFAAEMEK----LGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPG--------LTRYFKL  339 (364)
T ss_dssp             HHHHHHHHH----TTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTT--------CCSEEEE
T ss_pred             HHHHHHHHH----cCCeecCCCCCCcceEEEeccchHHHHHHhhccchHHHHHHHhcCCceecCC--------CcceEEE
Confidence            788888887    566554322  233333322211000 0000011234455667777543221        1345666


Q ss_pred             EecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        427 TCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      + +..+|++||++++++|++++++
T Consensus       340 ~-~~~~t~edid~~~~~l~ei~~~  362 (364)
T d2e7ja1         340 S-TYGLSDEEVDYVLNAFKEIIEK  362 (364)
T ss_dssp             E-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             e-ccCCCHHHHHHHHHHHHHHHHH
Confidence            5 4567999999999999999876

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.96  E-value=5.8e-28  Score=236.50  Aligned_cols=343  Identities=10%  Similarity=0.055  Sum_probs=229.5

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~  154 (457)
                      |+++|||+.+++ ++..+|+|++|+.+.+++--.++.     .|..++.+.+++.+.+..|.    +++++++++++++.
T Consensus        30 g~~vi~l~~g~p-df~~p~~v~~al~~~~~~~~~~Y~-----~g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~al~  103 (394)
T d1c7na_          30 GNEVVPLSVADM-EFKNPPELIEGLKKYLDETVLGYT-----GPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (394)
T ss_dssp             CTTCCCCCSSSC-SSCCCHHHHHHHHHHHHHCCCSSB-----CCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCCeEEccCCCC-CCCCCHHHHHHHHHHHhCCCcCCC-----CCCHHHHHHHHHHHHHhcCCCCCCcceEeeccchhhhh
Confidence            678899977665 777789999999999986212221     23444455555555544453    35677777779999


Q ss_pred             HHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        155 SAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       155 ~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      .++.+++++||.|++..+.+..........|...+.++.        .|.+.++..+..          ++++++++.++
T Consensus       104 ~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~----------~~~~~i~l~~P  173 (394)
T d1c7na_         104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD----------KNNKALLFCSP  173 (394)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC----------TTEEEEEEESS
T ss_pred             hhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhcc----------ccceEEEeccc
Confidence            999999999999999999988888888888877766543        256666666543          45678889999


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE-Ee
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC-VG  299 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v-~~  299 (457)
                      +||||.+.+   +++|.++|++|++++|+||+|+...+...................+++.|+||.+|.+|   |++ +.
T Consensus       174 ~NPTG~v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~  253 (394)
T d1c7na_         174 HNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIK  253 (394)
T ss_dssp             BTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECC
T ss_pred             ccccceeccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeeccccccccccccccccccccc
Confidence            999999998   67889999999999999999986555432111111111000123478899999997544   554 45


Q ss_pred             cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEE
Q psy15447        300 SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i  378 (457)
                      ++.+.+.+..... .....+.+....+++.......++ .+++.+.++++.+.+.+.++..  .+++.+..+.++.++|+
T Consensus       254 ~~~i~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~p~g~~~~~~  330 (394)
T d1c7na_         254 NPDIRERFTKSRD-ATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVN--HPEIKAPLIEGTYLQWI  330 (394)
T ss_dssp             CHHHHHHHHHHHH-HTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSBCCCCSBSSEEEE
T ss_pred             Chhhhhhhhhhhh-hccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhcc--ccceeecCCCceeEEEE
Confidence            5666665543221 112222344343443333322221 1345566666777777766642  24565554556777888


Q ss_pred             EecC-CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        379 YLQK-SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       379 ~~~~-~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      .++. ..       ...+++++|+++ ||.+.|+..+.   ..+.+++||++.  .++++|+++++.|++++++++
T Consensus       331 ~~~~~~~-------~~~~~~~~Ll~~~gV~v~pG~~Fg---~~~~~~iRis~~--~~~e~i~eal~rl~~~l~~Lk  394 (394)
T d1c7na_         331 DFRALKM-------DHKAMEEFMIHKAQIFFDEGYIFG---DGGIGFERINLA--APSSVIQESLERLNKALKDLK  394 (394)
T ss_dssp             ECGGGCC-------CHHHHHHHHHHTTCCCCEEGGGGC---GGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred             ECCCCCC-------CHHHHHHHHHHhCCEEEEcchhhC---CCCCCEEEEEEe--CCHHHHHHHHHHHHHHHHhcC
Confidence            8764 22       345788888876 99999876542   133578999985  578999999999999998874

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.96  E-value=4.4e-27  Score=232.03  Aligned_cols=347  Identities=14%  Similarity=0.114  Sum_probs=242.1

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHHHHHH
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFSTSAS  155 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~a~~~  155 (457)
                      ..||++.+++ .+...+.+++++.++++.......++....|..++++.+++.+.+..|.     +++++++++++|+..
T Consensus        27 ~~I~L~~G~P-d~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~  105 (418)
T d2r5ea1          27 KPLNLGQGFP-DYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYA  105 (418)
T ss_dssp             CCEECSSSCC-SSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred             CCEEccCCCC-CCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhh
Confidence            5689887664 5555678999999998764433334455567778888888888877662     346666677799999


Q ss_pred             HHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC---------------CHHHHHHHHHhhchhcccCCCCccEE
Q psy15447        156 AIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN---------------NMQHLEELLRQQDERDTLNSKVTKKF  220 (457)
Q Consensus       156 ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~---------------d~~~le~~l~~~~~~~~~~~~~~~~~  220 (457)
                      ++.+++++||.|++..++|..+...+...|.+++.++..               +.+.+++...           ..+++
T Consensus       106 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  174 (418)
T d2r5ea1         106 TIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-----------EKTKM  174 (418)
T ss_dssp             HHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCC-----------TTEEE
T ss_pred             hhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhh-----------ccccc
Confidence            999999999999999999999999999999888766532               3444443332           46678


Q ss_pred             EEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccCcc--
Q psy15447        221 IIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGSVG--  294 (457)
Q Consensus       221 vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~~g--  294 (457)
                      +++.+++||+|.+.+   +++|.++|++||+++|.||+|....+..... .+....+.  ....+++.|+||.++.+|  
T Consensus       175 ~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~pGlR  252 (418)
T d2r5ea1         175 IIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGM--WERTITIGSAGKTFSLTGWK  252 (418)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT--GGGEEEEEEHHHHTTCGGGC
T ss_pred             eecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccc--cceeeeeecCCccccCCCcc
Confidence            888999999999988   6688999999999999999998766543222 12222222  123488899999998666  


Q ss_pred             -cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH----hhC----cHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        295 -GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLL----KAN----PSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       295 -G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~----~~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                       ||+++++++++.+........++.  +.....++.+.+...    +..    .+++++++.+++.+.+.|++    .|+
T Consensus       253 iG~~~~~~~~i~~~~~~~~~~~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~  326 (418)
T d2r5ea1         253 IGWAYGPEALLKNLQMVHQNCVYTC--ATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAE----VGM  326 (418)
T ss_dssp             CEEEESCHHHHHHHHHHHTTTTCSC--CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHH----TTC
T ss_pred             cccccccchhhhhhhhccccccccc--ccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhh----cCC
Confidence             999999999888765443333332  333333333333211    111    24567778888999999998    688


Q ss_pred             EEeccCCCCeEEEEecCCc---ch--HHHHHHHHHHHHHHHHc-CeeEeccccCccc--cCCCCCeEEEEecCCCCHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSD---DE--VASKKLLQTICDMCIQA-GFAITCPSHLDQE--AKKQKPSIRITCNISHTEQDM  437 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~---~~--~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~--~~~~~~~lRi~~~~~~t~edi  437 (457)
                      .+..+.++.++|+.+..-.   ..  ........+++++|+++ ||.+.|+..+...  ...+.+++||++.  .+++++
T Consensus       327 ~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis~~--~~~e~l  404 (418)
T d2r5ea1         327 NPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENL  404 (418)
T ss_dssp             EEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEECC--SCHHHH
T ss_pred             cccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEEec--CCHHHH
Confidence            8876777888888875310   00  00011455788888765 9999988654321  1112578999984  489999


Q ss_pred             HHHHHHHHHHHH
Q psy15447        438 NSLIETLCKSHD  449 (457)
Q Consensus       438 ~~~~~~l~~~~~  449 (457)
                      ++++++|++++.
T Consensus       405 ~~a~~rl~~~lg  416 (418)
T d2r5ea1         405 QKAAEILRKWKG  416 (418)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHc
Confidence            999999998763

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=2.5e-27  Score=230.47  Aligned_cols=330  Identities=13%  Similarity=0.136  Sum_probs=235.0

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      .|+++||++.+++ ++..++.+.+++.+.+.+-..   ++....|..++++.+.+.+.+..|    .+.+++++++++|+
T Consensus        26 ~G~~vI~l~~G~p-~~~~p~~i~~~~~~~~~~~~~---~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~~t~G~~~al  101 (375)
T d1o4sa_          26 KGEDVINLTAGEP-DFPTPEPVVEEAVRFLQKGEV---KYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQAL  101 (375)
T ss_dssp             TTCCCEECCCSSC-SSCCCHHHHHHHHHHHTTCCC---CCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHH
T ss_pred             CCCCeEECCCcCC-CCCCCHHHHHHHHHHHhcCCc---CCCCCcCCHHHHHHHHhhhhhccccccccccccccCcHHHHH
Confidence            4788999988765 566678899999988865222   233344667777777777766555    34567778888999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ..++.+++++||.|++..++|..........+.....++..       |.+.++....           .+++++++.++
T Consensus       102 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~nP  170 (375)
T d1o4sa_         102 FNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV-----------GKTKAVLINSP  170 (375)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC-----------TTEEEEEEESS
T ss_pred             HHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhc-----------cCccEEEEeCC
Confidence            99999999999999999999888888888888777765543       3444433221           45678888888


Q ss_pred             CCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEec
Q psy15447        227 YMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGS  300 (457)
Q Consensus       227 ~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~  300 (457)
                      +||||.+.+   +++|.++|++|+++||.||+|+....+..........+. ++ ..|+++|+||.+|.+|   ||++++
T Consensus       171 ~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~-~~i~~~S~SK~~~l~G~R~G~~~~~  248 (375)
T d1o4sa_         171 NNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEG-FD-RIVYINGFSKSHSMTGWRVGYLISS  248 (375)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSS-ST-TEEEEEESTTTTTCGGGCCEEEECC
T ss_pred             CCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCC-CC-CEEEEeechhhccCCcccccccccc
Confidence            999999988   678899999999999999999876554322222222221 23 3589999999997555   999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLY  379 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~  379 (457)
                      +..++.+......  .....+.........   .++. .....+.++++.+.+.+.|++    .|+++..+..+.++|+.
T Consensus       249 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~~~~~~l~~----~g~~~~~p~gg~f~~~~  319 (375)
T d1o4sa_         249 EKVATAVSKIQSH--TTSCINTVAQYAALK---ALEVDNSYMVQTFKERKNFVVERLKK----MGVKFVEPEGAFYLFFK  319 (375)
T ss_dssp             HHHHHHHHHHHHH--HTCSCCHHHHHHHHH---HTTCCCHHHHHHHHHHHHHHHHHHHH----TTCCCCCCSBSSEEEEE
T ss_pred             ccchhhhhhhhcc--ccccccccchhhhhh---hcccchhhhHHHHHHHHHHHHHHHHh----cCceEecCCccEEEEEE
Confidence            9988877543322  222223333332222   2222 245667788889999999988    68877656667888888


Q ss_pred             ecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        380 LQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ++.+.         .+++.+|+ ++||++.++..+     ..++++||++.  .++++++++++.|+++++
T Consensus       320 ~~~~~---------~~~~~~ll~~~gV~v~pG~~F-----~~~g~iRis~~--~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         320 VRGDD---------VKFCERLLEEKKVALVPGSAF-----LKPGFVRLSFA--TSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             CSSCH---------HHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECC--SCHHHHHHHHHHHHHHHT
T ss_pred             CCCCH---------HHHHHHHHHhCCEEEEEcccc-----CCCCeEEEEEc--CCHHHHHHHHHHHHHHhc
Confidence            87542         24555555 569999987653     34679999985  589999999999998874

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.6e-26  Score=223.60  Aligned_cols=338  Identities=13%  Similarity=0.056  Sum_probs=227.5

Q ss_pred             EEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHHHHHHH
Q psy15447         83 INFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTSASAIA  158 (457)
Q Consensus        83 id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~~~ai~  158 (457)
                      |+|.-++. ++...|.|++|+.+.++. +..  ++....| .+..+++++.+++.+|.    +.+++++++++++..++.
T Consensus         2 ~~~~~~~~-df~~p~~i~eal~~~~~~-~~~--~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~   76 (361)
T d1d2fa_           2 LPFTISDM-DFATAPCIIEALNQRLMH-GVF--GYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIR   76 (361)
T ss_dssp             EECCSSSC-SSCCCHHHHHHHHHHHTT-CCC--CCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred             cCcCCCCC-CCCCCHHHHHHHHHHHhC-CCC--CCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhh
Confidence            55555444 677779999999998864 221  2222233 45666666666666664    356777778899999999


Q ss_pred             hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        159 AYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       159 a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      +++++||.|++..++|..+...+...|..++.++.        .|++.+++.+.+          .+++++++.+++|||
T Consensus        77 ~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~----------~~~~~i~l~~p~NPT  146 (361)
T d1d2fa_          77 QWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK----------PECKIMLLCSPQNPT  146 (361)
T ss_dssp             HSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS----------TTEEEEEEESSCTTT
T ss_pred             hccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhccc----------CCceeEEeccccccc
Confidence            99999999999999999999888888988776542        378888888754          456788889999999


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCc---ccEEEec-HHH
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSV---GGFCVGS-SYI  303 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~---gG~v~~~-~~~  303 (457)
                      |.+.+   +++|.++|++||+++|+||+|+...++.......  ....+++ .+++.|+||.++.+   .|++... +..
T Consensus       147 G~~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~--~~~~~~~-~v~~~s~SK~~~~~g~R~g~~~~~~~~~  223 (361)
T d1d2fa_         147 GKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW--SNVARGD-WALLTSGSKSFNIPALTGAYGIIENSSS  223 (361)
T ss_dssp             CCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCG--GGTCCSS-EEEEECSHHHHTCGGGCCEEEEECSHHH
T ss_pred             ccccchhhhhhhhhhhhhhheeeeeccccccccccccccccc--ccccccc-cccccccccccccccccceeeecchhHH
Confidence            99987   6799999999999999999998766554322222  2222333 47788999999654   4876544 333


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      .+.............+.+....++++.++....+ ..+.++.++++.+.+.+.+.+.  ..++.+..+..+.++|+.+..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~--~~~~~~~~p~gg~~~~~~l~~  301 (361)
T d1d2fa_         224 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA--FPELNWQIPQSTYLAWLDLRP  301 (361)
T ss_dssp             HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCCCCCSBCSEEEEECGG
T ss_pred             HHHHhhhcccccccccchhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhh--cccccccccCceeEEEEEccC
Confidence            2322211111112222344444444444433222 1245566666777776666542  245555545557778887752


Q ss_pred             -CcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        383 -SDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       383 -~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                       ..       +..+++++|+++ ||.+.|+..+.   ..+.+++|+++.  .+++++++.++.|++++++++
T Consensus       302 ~~~-------~~~~~~~~Ll~~~gv~v~pG~~F~---~~~~~~vRis~~--~~~e~l~~al~rl~~~l~~lr  361 (361)
T d1d2fa_         302 LNI-------DDNALQKALIEQEKVAIMPGYTYG---EEGRGFVRLNAG--CPRSKLEKGVAGLINAIRAVR  361 (361)
T ss_dssp             GCC-------CHHHHHHHHHHTTCEECEEGGGGC---GGGTTEEEEECC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred             CCC-------CHHHHHHHHHHhCCEEEEeccccC---CCCCCEEEEEEc--CCHHHHHHHHHHHHHHHHhcC
Confidence             22       356788888776 99998876542   234578999974  588999999999999998764

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.96  E-value=4.5e-27  Score=230.11  Aligned_cols=344  Identities=11%  Similarity=0.052  Sum_probs=233.7

Q ss_pred             ECCeeeEEeecCCc--cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccH
Q psy15447         77 INGIPCINFATHNY--LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGF  150 (457)
Q Consensus        77 ~~G~~~id~~s~~~--l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~  150 (457)
                      .+|+++||++.+++  .++...+.+++++.+.++. +..  ++....|..++.+++++.+.+..|.    +.+++++++.
T Consensus        27 ~~G~~vi~l~~G~P~~~df~~p~~i~~a~~~a~~~-~~~--~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~i~~G~~  103 (395)
T d1xi9a_          27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE-GHN--YYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVT  103 (395)
T ss_dssp             HTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHT-TCC--SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHH
T ss_pred             HCCCCeEECCCCCCCCCCCCCCHHHHHHHHHHHhc-CCC--CCCCCCCCHHHHHHHHHhhhhcccccccccccccccccc
Confidence            36889999988764  3566678899999999976 321  2333456667777777777776664    3567777778


Q ss_pred             HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        151 STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       151 ~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      +++..++.+++.+||.|++..++|..+...++..|.+++.++.       .|++++++.+.           ++++++++
T Consensus       104 ~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~-----------~~~~~v~l  172 (395)
T d1xi9a_         104 EALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT-----------DRTKAIAV  172 (395)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC-----------TTEEEEEE
T ss_pred             hhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEeccccccccchHHHHHHhhc-----------ccccEEEe
Confidence            9999999999999999999999999999999999998877652       25677666553           34567778


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEE
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFC  297 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v  297 (457)
                      .+++||||.+.+   +++|.++|++||+++|.||+|+...++..........   ++...|++.||||.++.+|   ||+
T Consensus       173 ~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~---~~~~vi~~~S~SK~~~~~GlRvG~~  249 (395)
T d1xi9a_         173 INPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLT---KDVPVIVMNGLSKVYFATGWRLGYM  249 (395)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHC---SSSCEEEEEESTTTTCCGGGCCEEE
T ss_pred             cCCCCCccchhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcC---CCCCEEEEeCcchhcccchhhcEee
Confidence            888999999998   6799999999999999999998765543222211111   1222488999999997655   775


Q ss_pred             Ee--cHHHHHHHHhhCCcc-eecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCC
Q psy15447        298 VG--SSYIIEHHRLSGSGY-CFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDT  373 (457)
Q Consensus       298 ~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~  373 (457)
                      +.  +...+..+....... ......+.+...++..++..-+ ...+.++.++++.+.+.+.|++   ..++.+..+.++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~p~gg  326 (395)
T d1xi9a_         250 YFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNE---IPGISTTKPQGA  326 (395)
T ss_dssp             EEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHT---STTEECCCCCBS
T ss_pred             EecCHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHh---CCCceecCCCee
Confidence            43  322222221111000 0111123333344444432111 1134567788899999999988   456666655668


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .++|+.+......     ...+++++|+ ++||.+.|+..+..   .+.+++||++.  .++++++++++.|++++++
T Consensus       327 ~~~~~~l~~~~~~-----~~~~~~~~ll~~~gV~v~PG~~Fg~---~~~~~~Ris~~--~~~e~l~eal~rl~~~l~e  394 (395)
T d1xi9a_         327 FYIFPKIEVGPWK-----NDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL--PPIEILEEAMDRFEKFMKE  394 (395)
T ss_dssp             SEECCEECSCSCS-----SHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             EEEeEECCCCCCC-----CHHHHHHHHHHhCCEEEEcChhhCC---CCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence            8888887643110     2335666655 56999998765421   23678999974  5899999999999998875

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=4.3e-27  Score=232.29  Aligned_cols=362  Identities=12%  Similarity=0.069  Sum_probs=244.5

Q ss_pred             CCeeeEEeecCCc-cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHH
Q psy15447         78 NGIPCINFATHNY-LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFS  151 (457)
Q Consensus        78 ~G~~~id~~s~~~-l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~  151 (457)
                      .++.+|||+.+.+ ....+.+.+.+++.+.++........+....|..++.+.+++.+.+..|.     +.+++++++++
T Consensus        36 ~~~~~I~l~~G~Pd~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~  115 (420)
T d1vp4a_          36 ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQ  115 (420)
T ss_dssp             TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHH
T ss_pred             CCCCcEecCCcCCCCccCCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCHHHeEeccchhh
Confidence            3578999987643 11123456778887777654322222333456677777777777766553     34566667779


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ++..++.+++++||.|++..++|..+...++..|.++..++..    |++.++..+.+.......  ...+.++++.+++
T Consensus       116 al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~p~  193 (420)
T d1vp4a_         116 ALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKI--KQVKFIYVVSNFH  193 (420)
T ss_dssp             HHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCG--GGEEEEEEECSSC
T ss_pred             hHHHHHHhhhccccccccccccccchhHHHHHHhhhcccccccccccccchhhhhhhhhHHHhhc--cccceeeEecCCC
Confidence            9999999999999999999999999999999999888877643    577777666543211000  1345677788999


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSY  302 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~  302 (457)
                      ||+|.+.+   +++|.++|++|++++|+||+|+...++..........+ . .+..++++|++|.++  ...||++++++
T Consensus       194 NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~-~-~~~~i~~~s~sk~~~~G~RiG~~~~~~~  271 (420)
T d1vp4a_         194 NPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG-G-PERVVLLNTFSKVLAPGLRIGMVAGSKE  271 (420)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH-C-TTTEEEEEESTTTTCGGGCEEEEECCHH
T ss_pred             CccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccc-c-ccceeEEeccccccccccccccccccch
Confidence            99999987   67999999999999999999986555332211111111 1 233477888999874  34599999999


Q ss_pred             HHHHHHhhCCcceecCCCcHHHHHHHHHHHHH---HhhCcHHHHHHHHHHHHHHHHhhcc-cccCCeEEeccCCCCeEEE
Q psy15447        303 IIEHHRLSGSGYCFSASLPPFLAVAANKALHL---LKANPSLLTKLREKCNTMHSLLSQH-KVTQRFLVQGHRDTPLKYL  378 (457)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~---~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i  378 (457)
                      +++.+......+..  +.+....+++...++.   .+...+.++.++++.+.+.+.|++. ...+|+++..+.++.++|+
T Consensus       272 ~i~~l~~~~~~~~~--~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~  349 (420)
T d1vp4a_         272 FIRKIVQAKQSADL--CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWL  349 (420)
T ss_dssp             HHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEE
T ss_pred             hhhhhhhhhhhccc--cCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEE
Confidence            99888654322222  2344444444333321   2222345566677777776666542 1246888876677888999


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      .+++..       +..++++.|.++||.+.|+..+... ....+++|++++. .++++++++++.|++++++..++
T Consensus       350 ~~~~~~-------d~~~~~~~l~~~gV~v~PG~~F~~~-~~~~~~iRls~~~-~~~e~l~~a~~rL~~~l~~~~~~  416 (420)
T d1vp4a_         350 TLPEGF-------DTWEMFEYAKRKKVFYVPGRVFKVY-DEPSPSMRLSFCL-PPDEKIVEGIKRLREVVLEYGKE  416 (420)
T ss_dssp             ECCTTC-------CTTTTHHHHHHHTEECEEGGGGCTT-CCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCC-------CHHHHHHHHHHCCeEEEechhhCCC-CCCCCEEEEEeCc-CCHHHHHHHHHHHHHHHHHhhHh
Confidence            887543       3346778899999999987654320 1235799999853 58899999999999999887654

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.95  E-value=9.9e-27  Score=228.46  Aligned_cols=356  Identities=13%  Similarity=0.085  Sum_probs=233.0

Q ss_pred             CeeeEEeecCCcc-CCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHHHH
Q psy15447         79 GIPCINFATHNYL-SFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l-~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~a~  153 (457)
                      +..+|||+++.+- ...+.+.+.+++.+.++..+.....+....|..++.+.+++.+.+..|    .+.+++++++++++
T Consensus        28 ~~~~i~l~~G~P~~~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al  107 (403)
T d1wsta1          28 TSDVISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQAL  107 (403)
T ss_dssp             SSSCEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHH
T ss_pred             CCCcEECCCCCCCccccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCChHHeeecccchHHH
Confidence            3457888875431 111234677777777765321111122334566666666666665555    34566666777999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN  229 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~  229 (457)
                      ..++.+++++||.|++..++|..+...+...|.++..++.+    +...+.........    .......++++.+++||
T Consensus       108 ~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~NP  183 (403)
T d1wsta1         108 DLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRK----QGKRVKIVYTVSTFQNP  183 (403)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHH----TTCCCCEEEECCSSCTT
T ss_pred             HHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCccccccccchhhhh----ccccccccccccccCCC
Confidence            99999999999999999999999999999999888777643    33333322222111    01245567888889999


Q ss_pred             CCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc--CcccEEEecHHHH
Q psy15447        230 SADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG--SVGGFCVGSSYII  304 (457)
Q Consensus       230 ~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg--~~gG~v~~~~~~~  304 (457)
                      +|.+.+   +++|.++|++||++||+||+|....++..........+  ..+..++++|+||.++  .+.||++++++++
T Consensus       184 tG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~G~RiG~~i~~~~~i  261 (403)
T d1wsta1         184 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFD--DYGRVIYLGTFSKILAPGFRIGWVAAHPHLI  261 (403)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGC--SSSCEEEEEESTTTTCGGGCCEEEEECHHHH
T ss_pred             CCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccC--CCCcEEEEccccceecCcccccccccchHHH
Confidence            999988   56888999999999999999976544322111111111  1234688999999994  3459999999988


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHH--HHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALH--LLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ  381 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~--~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  381 (457)
                      +.+.........  ..+.....+..+.+.  ..+. ..+.++.++++.+.+.+.|.+.. ..++.+..+.++.++++.++
T Consensus       262 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~p~gg~~~~~~~~  338 (403)
T d1wsta1         262 RKMEIAKQSIDL--CTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYM-PEGVEWTKPEGGMFVRVTLP  338 (403)
T ss_dssp             HHHHHHHHHHHS--SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CTTCEECCCSBSSEEEEECC
T ss_pred             HHHHHHHhhhcc--ccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhc-cCCeEEeCCCceeEEEEECC
Confidence            877543322222  223333222222221  1111 13456666677777777776621 14677766677889999888


Q ss_pred             CCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        382 KSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ...       ....+++.|.++||++.|+..+.. ....++++||+++. .++++++++++.|++++++..
T Consensus       339 ~~~-------~~~~~~~~l~~~gV~v~pg~~f~~-~~~~~~~iRi~~~~-~~~~~l~~al~rl~~~l~~~~  400 (403)
T d1wsta1         339 EGI-------DTKLMMERAVAKGVAYVPGEAFFV-HRDKKNTMRLNFTY-VPEETIREGVRRLAETIKEEM  400 (403)
T ss_dssp             TTC-------CTTTTHHHHHHTTEECEEGGGGST-TCCCCSEEEEECSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC-------CHHHHHHHHHHCCEEEEechhhcC-CCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHHHH
Confidence            654       345688899999999988754322 12245799999854 589999999999999988653

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.3e-26  Score=224.73  Aligned_cols=323  Identities=18%  Similarity=0.142  Sum_probs=231.0

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHh
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAA  159 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a  159 (457)
                      .||++.+++ ++..+|.+++|+.+.+.+. ..   +....|    ..+|++.+|++++.+  ++++++++++++..++.+
T Consensus        27 ~I~ls~g~p-~~~~p~~i~~al~~~l~~~-~~---Y~~~~G----~~elr~aiA~~~~~~~~~Iiit~G~~~al~~~~~~   97 (368)
T d1v2da_          27 AVNLGQGFP-SNPPPPFLLEAVRRALGRQ-DQ---YAPPAG----LPALREALAEEFAVEPESVVVTSGATEALYVLLQS   97 (368)
T ss_dssp             CEECCCCSC-SSCCCHHHHHHHHHHTTTS-CS---CCCTTC----CHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHH
T ss_pred             CEEecCCCC-CCCCCHHHHHHHHHHhhcc-cC---CCCCcC----CHHHHHHHHhhcccCCcceeeccchHHHHHHHhhc
Confidence            689987665 5666789999999888652 12   222223    367888888988854  568888888999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC--------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH--------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~--------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      +++++|.|++..++|..........|..+..++.        .|++.+++.+.+           .++++++.+++||||
T Consensus        98 l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~-----------~~~~i~~~~p~NPtG  166 (368)
T d1v2da_          98 LVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTP-----------RTRALLLNTPMNPTG  166 (368)
T ss_dssp             HCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCT-----------TEEEEEEESSCTTTC
T ss_pred             cccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhcc-----------CceEEEEcCCCCccc
Confidence            9999999999999999888888888877765543        377888777643           446777788899999


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIE  305 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~  305 (457)
                      .+.+   +++|.++|++||+++|.||+++............. . .  .+..+++.|+||.++.+|   |++++++++++
T Consensus       167 ~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~sk~~~~~G~R~g~~~~~~~~~~  242 (368)
T d1v2da_         167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE-F-A--PERTFTVGSAGKRLEATGYRVGWIVGPKEFMP  242 (368)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHH-H-C--TTTEEEEEEHHHHTTCGGGCCEEEECCTTTHH
T ss_pred             ccCCHHHHHHHHHHHHHcCCeeeechhhhhhccccccccccc-c-c--ccccceeecccccccccccccccccccccccc
Confidence            9998   77899999999999999999986554432222111 1 1  122466789999887554   99999998888


Q ss_pred             HHHhhCCcceecCCCcHHHHHHHHHHHHHHhh---CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecC
Q psy15447        306 HHRLSGSGYCFSASLPPFLAVAANKALHLLKA---NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQK  382 (457)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~---~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~  382 (457)
                      .+.........  +.++....++.+++.....   ....++.++++.+++.+.|++    .|+.+..+..++++++.++.
T Consensus       243 ~~~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~p~g~~~~~~~l~~  316 (368)
T d1v2da_         243 RLAGMRQWTSF--SAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA----MGLRVYVPEGTYFLMAELPG  316 (368)
T ss_dssp             HHHHHHHHHTS--SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH----TTCCEECCSBSSEEEEECTT
T ss_pred             hhhhhhhcccc--ccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHh----cCcEEecCCceeEEEEeCCc
Confidence            77543322222  2344444444444433222   234667788889999999998    68887766668888888875


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      ..           ..+.|.++||.++++..+... ..+.+++||++.  .+++++++++++|++++
T Consensus       317 ~~-----------~~~ll~~~gI~v~pg~~F~~~-~~~~~~iRis~~--~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         317 WD-----------AFRLVEEARVALIPASAFYLE-DPPKDLFRFAFC--KTEEELHLALERLGRVV  368 (368)
T ss_dssp             CC-----------HHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred             cH-----------HHHHHHhCCEEEEechhhCCC-CCCCCEEEEEec--CCHHHHHHHHHHHHHhC
Confidence            42           223466789999987543210 134679999975  58999999999998763

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.95  E-value=1.5e-26  Score=225.35  Aligned_cols=331  Identities=13%  Similarity=0.112  Sum_probs=230.8

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCC-CCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGV-GSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSAS  155 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~  155 (457)
                      ++-|+|.++.   +.. ...+.+++.+.++.+.. ++..........+...++++.+|+++|.+  ++++++||++++..
T Consensus         7 ~~~yld~~~~---~~~-p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~i~~~~g~t~a~~~   82 (381)
T d1elua_           7 NKTYFNFGGQ---GIL-PTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDI   82 (381)
T ss_dssp             TSEECCTTTC---CCC-CHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHH
T ss_pred             CCEEeeCCcc---cCC-CHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcccEEEECChHHHhhh
Confidence            3446665432   222 34588899888875421 11111111122355677899999999964  56778888999998


Q ss_pred             HHHhh-cCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCC---HHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        156 AIAAY-VKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNN---MQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       156 ai~a~-~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d---~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ++.++ .++||.|++....|++....+    +..|.++..++.++   .+..++.+++..       +++++++++.+++
T Consensus        83 ~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i-------~~~t~~v~i~~~~  155 (381)
T d1elua_          83 VLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHL-------GPKTRLVILSHLL  155 (381)
T ss_dssp             HHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTC-------CTTEEEEEEESBC
T ss_pred             cchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhh-------ccccccccccccc
Confidence            98887 689999999999998765543    34588888877542   223334444332       2577899999999


Q ss_pred             CCCCCCCChHHHHHHHHHc----CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC-cc-cEEEecH
Q psy15447        228 MNSADICPLKDILSLRSKY----QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS-VG-GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~l~~i~~l~~~~----g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~-~g-G~v~~~~  301 (457)
                      |++|.+.|+++|.++|+++    ++++++|++|+.|...         ..+...++|+++.|++|++++ .| |++..++
T Consensus       156 n~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~~~p~G~g~l~~~~  226 (381)
T d1elua_         156 WNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP---------LDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHG  226 (381)
T ss_dssp             TTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBC---------CCTTTSCCSEEEEESSSTTCCCTTCEEEEECT
T ss_pred             ccccccchhhHHHHHHhhccccccccccccccccccccc---------ccccccccccccccccccccccchhhHHHhhH
Confidence            9999999999999999985    6999999999876432         233334579999999999964 33 7787777


Q ss_pred             HHHHHHHhhCCcc------------e--------ecCCCcHHHHHHHHHHHHHHhhC---cHHHHHHHHHHHHHHHHhhc
Q psy15447        302 YIIEHHRLSGSGY------------C--------FSASLPPFLAVAANKALHLLKAN---PSLLTKLREKCNTMHSLLSQ  358 (457)
Q Consensus       302 ~~~~~~~~~~~~~------------~--------~~~~~~~~~~aaa~a~l~~~~~~---~~~~~~l~~~~~~l~~~L~~  358 (457)
                      +..+.+.....++            .        ..++.+.....+..++++.+...   +...++.+++.+++.+.|++
T Consensus       227 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~  306 (381)
T d1elua_         227 DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQ  306 (381)
T ss_dssp             TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhhhhhHHHHHHHHHhc
Confidence            6665442111100            0        11234555556666777766542   33457888899999999998


Q ss_pred             ccccCCeEEecc--CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHH
Q psy15447        359 HKVTQRFLVQGH--RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQD  436 (457)
Q Consensus       359 ~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~ed  436 (457)
                         ++++++.++  +.++++.+.+....       ....+.+.|.++||.++....        ++++|++++..+|++|
T Consensus       307 ---~~~~~~~~~~~~~~~~vsf~~~~~~-------~~~~i~~~L~~~gi~v~~~~~--------~~~lRis~~~~nt~ed  368 (381)
T d1elua_         307 ---LPHVHCLATSAPQAGLVSFTVDSPL-------GHRAIVQKLEEQRIYLRTIAD--------PDCIRACCHYITDEEE  368 (381)
T ss_dssp             ---STTEEESCSSCCSSSEEEEEECSSS-------CHHHHHHHHHHTTEECEEETT--------TTEEEEECCTTCCHHH
T ss_pred             ---CCCeEecCCCCccccEEEEEcCCCC-------CHHHHHHHHHhCCcEEEecCC--------CCEEEEecCCCCCHHH
Confidence               678888643  34678888776654       445788999999998875432        4789999999999999


Q ss_pred             HHHHHHHHHHH
Q psy15447        437 MNSLIETLCKS  447 (457)
Q Consensus       437 i~~~~~~l~~~  447 (457)
                      ||+++++|+++
T Consensus       369 id~ll~~l~e~  379 (381)
T d1elua_         369 INHLLARLADF  379 (381)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHHhh
Confidence            99999999764

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=6.1e-27  Score=223.60  Aligned_cols=330  Identities=17%  Similarity=0.168  Sum_probs=218.9

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhc
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYV  161 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~  161 (457)
                      ++||.+-+.  ..++|++++|+.++..  |      ...||..+...+||+++|+++|.+.+++++||++|+..++++++
T Consensus         1 ~~~~~~~~~--t~p~p~v~~A~~~a~~--g------~~~yg~~p~~~~le~~lA~~~G~~~~~~~~sGt~A~~~al~a~~   70 (343)
T d1m6sa_           1 MIDLRSDTV--TKPTEEMRKAMAQAEV--G------DDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHT   70 (343)
T ss_dssp             CEECSCGGG--CCCCHHHHHHHHTCCC--C------CGGGTCCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHC
T ss_pred             CcccccccC--CCCCHHHHHHHHhhhc--C------CcccCCCHHHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHHHh
Confidence            478876321  2247999999865421  1      22356778899999999999999999999999999999999999


Q ss_pred             CCCCEEEEeCcccHHHHHH---HHhcCCeEEEec----CCCHHHHHHHHHhhchhcccCCCCccE-EEEEecCCCCCCCC
Q psy15447        162 KRNDAVFVDENINFAIQTG---LIASRCKVQYFK----HNNMQHLEELLRQQDERDTLNSKVTKK-FIIVEGVYMNSADI  233 (457)
Q Consensus       162 ~~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~----~~d~~~le~~l~~~~~~~~~~~~~~~~-~vi~e~v~~~~G~i  233 (457)
                      ++||.++.....|.++...   ....+......+    ..|++.+++.+......     ..... +++...+++++|.+
T Consensus        71 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~  145 (343)
T d1m6sa_          71 QRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIH-----FPRTSLIAIENTHNRSGGRV  145 (343)
T ss_dssp             CTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECEETTEECHHHHHHHSCCSCTT-----SCCEEEEEEESSBTTTTSBC
T ss_pred             ccCCceeccccccceeeecccccccccceeeccccccCccCHHHHHHhhhhhhcc-----cccccccccccccccCCcee
Confidence            9999999999988765432   233333333332    23788888777654321     12334 44455555667777


Q ss_pred             CC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEecHHHHHHHHh
Q psy15447        234 CP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGSSYIIEHHRL  309 (457)
Q Consensus       234 ~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~~~~~~~~~~  309 (457)
                      .|   +++|+++|++||+++++|++++.+..+..+.........   . +..+.+.+|.. |..+|++.+..+.+.....
T Consensus       146 ~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  221 (343)
T d1m6sa_         146 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY---A-DSVMFCLSKGLCAPVGSVVVGDRDFIERARK  221 (343)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT---C-SEEEEESSSTTCCSSCEEEEECHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccc---c-ccccccccccccccccccccccHHHHhhhHh
Confidence            76   568888889999999999998866554322222222211   1 23344445544 4556778888877766654


Q ss_pred             hCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        310 SGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       310 ~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      ....+.++.+.+...+++.....   .......+...++..++.+.+.+   +.+.....+..++++++.+.....    
T Consensus       222 ~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~----  291 (343)
T d1m6sa_         222 ARKMLGGGMRQAGVLAAAGIIAL---TKMVDRLKEDHENARFLALKLKE---IGYSVNPEDVKTNMVILRTDNLKV----  291 (343)
T ss_dssp             HHHHHTCCCSSTHHHHHHHHHHH---HHSSTTHHHHHHHHHHHHHHHHH---HTCBCCGGGCCSSEEEEECTTSSS----
T ss_pred             hCcccccccchhHHHHHhhhhhh---hhhHHHHHHHHHHHHHhhhHHHH---hccCccCCCCCceEEEEEeCCCcc----
Confidence            33222233333333333322222   22223455666777777777766   233334445567888888765321    


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                        ...+++++|+++||++++..         ++.+|++++..+|+||||+++++|+++++++
T Consensus       292 --~a~~l~~~L~~~Gi~v~~~~---------~~~iRi~~~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         292 --NAHGFIEALRNSGVLANAVS---------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             --CHHHHHHHHHHHTEECEEEE---------TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             --cHHHHHHHHHHCCCEEecCC---------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence              45689999999999988754         4789999999999999999999999999875

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-25  Score=220.64  Aligned_cols=347  Identities=14%  Similarity=0.118  Sum_probs=236.0

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC-----cEEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE-----ETALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sG~~a~  153 (457)
                      ++.+||++.+++ ++...+.+++++.++++. +....++....|..++.+.+++.+.+.+|.+     .+++++++++++
T Consensus        24 ~~dvI~l~~G~p-~~~~p~~v~~a~~~al~~-~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~al  101 (418)
T d1w7la_          24 EHDVVNLGQGFP-DFPPPDFAVEAFQHAVSG-DFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL  101 (418)
T ss_dssp             TSCCEECCCCSC-SSCCCHHHHHHHHHHTSS-CGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred             CCCCEECCCCCC-CCCCCHHHHHHHHHHHhC-CCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHHHH
Confidence            567899988765 565567788999888864 2111123334566777777777777766643     355666667899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-----------------CHHHHHHHHHhhchhcccCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-----------------NMQHLEELLRQQDERDTLNSKV  216 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----------------d~~~le~~l~~~~~~~~~~~~~  216 (457)
                      ..++.+++.+||.|++..+++..+...+...|.+++.++..                 |.+++..   ...        +
T Consensus       102 ~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~--------~  170 (418)
T d1w7la_         102 FTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAG---KFT--------S  170 (418)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHH---HCC--------T
T ss_pred             HHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhc---ccc--------c
Confidence            99999999999999999999999888888889887665422                 2222222   221        4


Q ss_pred             ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC
Q psy15447        217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      .++++++.+++||+|.+.+   +++|.++|++|++++|.||+|....++..-. ......+. . +..+++.|+||.++.
T Consensus       171 ~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~-~-~~~i~~~S~SK~~~~  248 (418)
T d1w7la_         171 RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGM-W-ERTLTIGSAGKTFSA  248 (418)
T ss_dssp             TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTT-G-GGEEEEEEHHHHTTC
T ss_pred             cccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHcccc-c-cccceecccCccccC
Confidence            6678889999999999987   6789999999999999999998655543211 12222122 1 235889999999976


Q ss_pred             cc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh---hC-----cHHHHHHHHHHHHHHHHhhcccc
Q psy15447        293 VG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK---AN-----PSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       293 ~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~---~~-----~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      +|   ||+++++++++.+........+  +.+.....++.+++....   +.     ...+++++++++.+.+.|++   
T Consensus       249 pG~RvG~~v~~~~~~~~l~~~~~~~~~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---  323 (418)
T d1w7la_         249 TGWKVGWVLGPDHIMKHLRTVHQNSVF--HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQS---  323 (418)
T ss_dssp             GGGCCEEEECCHHHHHHHHHHHHTTTS--CCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             CCCcccccccchhhhhhhccccccccc--cccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhh---
Confidence            55   9999999988887654322222  235555455554543321   11     24567788888889999988   


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcc------hHHHHHHHHHHHHHHHH-cCeeEeccccCcc--ccCCCCCeEEEEecCCC
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDD------EVASKKLLQTICDMCIQ-AGFAITCPSHLDQ--EAKKQKPSIRITCNISH  432 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~--~~~~~~~~lRi~~~~~~  432 (457)
                       .|+++..+.++.++|+.++....      .........+++++|++ +||.+.|+..+..  ......+++||++.  .
T Consensus       324 -~g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis~~--~  400 (418)
T d1w7la_         324 -VGLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV--K  400 (418)
T ss_dssp             -TTCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC--C
T ss_pred             -cCCcccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEEEc--C
Confidence             68888767778888888752100      00000134567777665 5999998765422  11234679999974  5


Q ss_pred             CHHHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCKSH  448 (457)
Q Consensus       433 t~edi~~~~~~l~~~~  448 (457)
                      +++++++++++|++..
T Consensus       401 ~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         401 DEATLQAMDEKLRKWK  416 (418)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            8999999999998864

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.95  E-value=4.2e-25  Score=217.34  Aligned_cols=346  Identities=13%  Similarity=0.071  Sum_probs=226.4

Q ss_pred             CCeeeEEeecCCc-cCC--CCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----------CCcEE
Q psy15447         78 NGIPCINFATHNY-LSF--VENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----------LEETA  144 (457)
Q Consensus        78 ~G~~~id~~s~~~-l~~--~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----------~~~~i  144 (457)
                      .++++|||+.+++ +..  ...+.+.+++.+.+.....  .++....|..++.+.+++.+.+.++          .++++
T Consensus        28 ~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~  105 (412)
T d1bw0a_          28 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQEC--NGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVV  105 (412)
T ss_dssp             SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCS--SSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEE
T ss_pred             CCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCC--CCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEE
Confidence            3567999987653 121  1235667777776654222  1233344666666666666665432          33567


Q ss_pred             EecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-------CCHHHHHHHHHhhchhcccCCCCc
Q psy15447        145 LYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-------NNMQHLEELLRQQDERDTLNSKVT  217 (457)
Q Consensus       145 ~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~~~~~  217 (457)
                      +++++++|+..++.+++++||.|++..++|..+...+...|.+++.++.       .+++++++...           ..
T Consensus       106 it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~-----------~~  174 (412)
T d1bw0a_         106 LCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD-----------DK  174 (412)
T ss_dssp             EESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC-----------TT
T ss_pred             EecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhh-----------cc
Confidence            7777789999999999999999999999999999999999999887763       25566655442           35


Q ss_pred             cEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc-c-cccCCCCCCccEEEecCcccccC
Q psy15447        218 KKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV-T-EYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       218 ~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~-~-~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      ++++++.+++||+|.+.+   +++|.++|++|++++|+||+|+...+....... . .....+....-++++|+||.++.
T Consensus       175 ~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~  254 (412)
T d1bw0a_         175 TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVV  254 (412)
T ss_dssp             EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSC
T ss_pred             ccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCcc
Confidence            678888899999999988   678888899999999999999765443211111 1 11111111223678899999976


Q ss_pred             cc---cEEEecH------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHH-HHh-hCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447        293 VG---GFCVGSS------YIIEHHRLSGSGYCFSASLPPFLAVAANKALH-LLK-ANPSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       293 ~g---G~v~~~~------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~-~~~-~~~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      +|   ||+++++      .++......   .....+.++...+.+.+.+. ..+ ...+.+++++++++.+.+.|.+   
T Consensus       255 ~G~RvG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~---  328 (412)
T d1bw0a_         255 PGWRLGWLLYVDPHGNGPSFLEGLKRV---GMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGE---  328 (412)
T ss_dssp             GGGCCEEEEEECTTCSCHHHHHHHHHH---HHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             CCCCcccccccchhhcchhhhhhhccc---cccccCCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHH---
Confidence            65   9987753      222222211   11122223333333322221 111 1134667788888899998877   


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      ..|+.+..+.++.++++.++......  .....+++++|+++ ||.+.|+..+     ..++++||++.  .++++++++
T Consensus       329 ~~g~~~~~p~gg~~l~~~~~~~~~~~--~~~~~~~~~~ll~~~gV~v~PG~~F-----g~~g~iRis~~--~~~e~l~ea  399 (412)
T d1bw0a_         329 CIGLAPTMPRGAMYLMSRIDLEKYRD--IKTDVEFFEKLLEEENVQVLPGTIF-----HAPGFTRLTTT--RPVEVYREA  399 (412)
T ss_dssp             STTEEECCCCBTTEEEEEECGGGBSS--CCSHHHHHHHHHHHHCEECEEGGGG-----TCTTEEEEECC--SCHHHHHHH
T ss_pred             hcCceecCCCCceEEEEeCChhhcCC--CCCHHHHHHHHHHhCCEEEEecccc-----CCCCeEEEEEc--CCHHHHHHH
Confidence            57888876677888888775221000  00234678888764 9999987653     34689999985  589999999


Q ss_pred             HHHHHHHHHHh
Q psy15447        441 IETLCKSHDIA  451 (457)
Q Consensus       441 ~~~l~~~~~~~  451 (457)
                      ++.|+++++..
T Consensus       400 l~Rl~~~l~~~  410 (412)
T d1bw0a_         400 VERIKAFCQRH  410 (412)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999988653

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.95  E-value=7.7e-26  Score=218.20  Aligned_cols=318  Identities=14%  Similarity=0.096  Sum_probs=209.5

Q ss_pred             eeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-EEEecccH-HHHHHH
Q psy15447         80 IPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-TALYSFGF-STSASA  156 (457)
Q Consensus        80 ~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-~i~~~sG~-~a~~~a  156 (457)
                      .++|||++| |+++.  +|.+++++.+.+......    +     ..-..+|++.+|+++|.+. .+++++|+ +++..+
T Consensus        22 ~~~idls~~~np~~~--p~~~~~a~~~~~~~~~~Y----p-----~~~~~~Lr~aia~~~~v~~~~I~~~~g~~~~~~~~   90 (355)
T d1lc5a_          22 DQLLDFSANINPLGM--PVSVKRALIDNLDCIERY----P-----DADYFHLHQALARHHQVPASWILAGNGETESIFTV   90 (355)
T ss_dssp             GGSEECSSCCCTTCC--CHHHHHHHHHTGGGGGSC----C-----CTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHH
T ss_pred             hheEEccCCCCCCCC--CHHHHHHHHHHHHHhccC----C-----CCChHHHHHHHHHHhCCCHHHEEecccHHHHHHHH
Confidence            468999987 66664  588999998877654221    1     1112579999999999663 35555555 555555


Q ss_pred             HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCC------HHHHHHHHHhhchhcccCCCCccEEEEEecCCCCC
Q psy15447        157 IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNN------MQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNS  230 (457)
Q Consensus       157 i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d------~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~  230 (457)
                      +.++.+.++.|..  +.+..+.......+..+..++...      .+++++.+   .        .+++++++.+++||+
T Consensus        91 ~~~~~~~~~~v~~--p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~--------~~~~~v~l~nP~NPt  157 (355)
T d1lc5a_          91 ASGLKPRRAMIVT--PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEAL---T--------PDLDCLFLCTPNNPT  157 (355)
T ss_dssp             HHHHCCSEEEEEE--SCCTHHHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHC---C--------TTCCEEEEESSCTTT
T ss_pred             HhhhccccccccC--CccceeccccccccccceeeeeeccCCccceeeeeecc---c--------cccceeeeecccCcc
Confidence            5554443333333  344444445556666666655321      12222222   1        355677788889999


Q ss_pred             CCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH-H
Q psy15447        231 ADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY-I  303 (457)
Q Consensus       231 G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~-~  303 (457)
                      |.+.+   +.+|.++|++|++++|+||+|......  +......... . ...+++.|+||++|.+|   ||++++++ +
T Consensus       158 G~~~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~--~~~~~~~~~~-~-~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~  233 (355)
T d1lc5a_         158 GLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH--ETGFIPALKD-N-PHIWVLRSLTKFYAIPGLRLGYLVNSDDAA  233 (355)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT--CCCSGGGCTT-C-TTEEEEEESTTTTTCTTTCCEEEECCCHHH
T ss_pred             cccchhhhhhhhhhhccccccccccccceeeeeee--cccccccccc-c-ccceeecccccccccccccccceeccchhh
Confidence            99988   668889999999999999998643322  1222211211 1 23588999999998666   99988755 4


Q ss_pred             HHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        304 IEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      .+.++....+    .+.+.++..++.++++......+.+++++++.+++.+.|.+   ..++.+. +++++++++.++.+
T Consensus       234 ~~~~~~~~~~----~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~-p~~~~f~~~~~~~~  305 (355)
T d1lc5a_         234 MARMRRQQMP----WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ---LPLLTVY-PGRANYLLLRCERE  305 (355)
T ss_dssp             HHHHHHHSCT----TCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT---STTEEEC-CCSSSEEEEEESCT
T ss_pred             hHHHHhhcCC----ccccccccccccccccccchhHHHHHHHHHHHHHHHHHHhh---cCCcEEC-CCCCEEEEEECCCC
Confidence            4555443322    23466666666666643322334677888888899899988   5687764 66788888887754


Q ss_pred             cchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        384 DDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      .         .++++.|.++||.+++...+.   ...++++||+++   +++|+++++++|++++
T Consensus       306 ~---------~~~~~~L~~~gv~vr~~~~f~---~~~~~~iRis~~---~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         306 D---------IDLQRRLLTQRILIRSCANYP---GLDSRYYRVAIR---SAAQNERLLAALRNVL  355 (355)
T ss_dssp             T---------CCHHHHHHTTTEECEECTTST---TCCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred             H---------HHHHHHHHHCCcEEEeCccCC---CCCCCEEEEEeC---CHHHHHHHHHHHHHhC
Confidence            2         358889999999998754211   223679999985   7999999999999863

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=4.4e-25  Score=216.51  Aligned_cols=325  Identities=12%  Similarity=0.108  Sum_probs=232.4

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCC---CcEEEecccHHHHHHHHHh----hcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGL---EETALYSFGFSTSASAIAA----YVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a~~~ai~a----~~~~gd~  166 (457)
                      .+.+.+++.+.+++....+..+...  .-..+..++.++.+|+++|.   +.++++.++++++..++.+    ..++||.
T Consensus        35 p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~~~~~~~~~~~~~~~g~~  114 (405)
T d1jf9a_          35 PSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDN  114 (405)
T ss_dssp             CHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHHHHHHCCTTCE
T ss_pred             CHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHHHHHHhcccccccCCCCE
Confidence            5789999999887632211111111  11235677888999999983   3556777788887766654    3588999


Q ss_pred             EEEeCcccHHHHHHH----HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        167 VFVDENINFAIQTGL----IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       167 v~~~~~~h~~~~~~~----~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      |++....|++...++    +..|.++.+++.+     |++.+++.+.           +++++|+++.+.+.+|.+.|++
T Consensus       115 il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~g~~~~~~~~~~i~-----------~~t~lv~~~~v~~~tG~~~pi~  183 (405)
T d1jf9a_         115 IIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFD-----------EKTRLLAITHVSNVLGTENPLA  183 (405)
T ss_dssp             EEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCC-----------TTEEEEEEESBCTTTCCBCCHH
T ss_pred             EEEEeCcccchHHHHHHHHHHcCcEEEEECCCCCCcCCHHHHHHhcc-----------CCcEEEEEecCCCcccccCchH
Confidence            999999988855544    3458888888743     5666665543           5778999999999999999999


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCc---
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSG---  313 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~---  313 (457)
                      +|.++|+++|+++++|.+|+.|...         .++...++|+++.|.+|++|+.| |++..+++..+........   
T Consensus       184 ~i~~~~~~~g~~~~vD~~q~~g~~~---------id~~~~~~D~~~~s~hK~~Gp~G~g~l~v~~~~~~~~~~~~~~~~~  254 (405)
T d1jf9a_         184 EMITLAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSM  254 (405)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTSC---------CCHHHHTCSEEEEEGGGTTSCSSCEEEEECHHHHTTCCCSSCSSSS
T ss_pred             HhhhHHHHcCCeeecccceeccccc---------cchhhcCCceeeccccccccCCCceeeeechhhhcccCcccccccc
Confidence            9999999999999999999987542         22222356999999999998765 8888888776544221100   


Q ss_pred             ---------c-------ee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCC
Q psy15447        314 ---------Y-------CF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDT  373 (457)
Q Consensus       314 ---------~-------~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~  373 (457)
                               .       .| .++.+...+++..++++++.+.  +...++...+.+++.+.++.   .+......+ ...
T Consensus       255 ~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~---~~~~~~~~~~~r~  331 (405)
T d1jf9a_         255 IATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLES---VPDLTLYGPQNRL  331 (405)
T ss_dssp             EEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT---STTEEEESCTTCC
T ss_pred             cCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhc---CCcccccCCcCcC
Confidence                     0       01 2356777777777888877653  45666777778888888877   445555433 346


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +++.+.++..        ...++...|.++||.++.+.++..   .....++.+|++++..+|++|||+++++|+++.+.
T Consensus       332 ~ivsf~~~~~--------~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         332 GVIAFNLGKH--------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             SEEEEEETTC--------CHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEcCCC--------CHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            7888877654        345678888889999987665533   11223578999999999999999999999999876


Q ss_pred             h
Q psy15447        451 A  451 (457)
Q Consensus       451 ~  451 (457)
                      +
T Consensus       404 ~  404 (405)
T d1jf9a_         404 L  404 (405)
T ss_dssp             H
T ss_pred             c
Confidence            5

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=2e-25  Score=218.03  Aligned_cols=342  Identities=11%  Similarity=0.039  Sum_probs=228.9

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcEEEecccHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EETALYSFGFSTS  153 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sG~~a~  153 (457)
                      .|+++||++.+++ ++..++.+.+++.+....    ..++....|..++.+.+++.+.+..|.    +++++++++++++
T Consensus        26 ~g~~vi~l~~G~p-~~~~p~~~~~al~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G~~~~l  100 (389)
T d2gb3a1          26 RGVRIHHLNIGQP-DLKTPEVFFERIYENKPE----VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI  100 (389)
T ss_dssp             TTCEEEECSSCCC-CSCCCTHHHHHHHHTCCS----SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHH
T ss_pred             cCCCEEECCCCCC-CCCCCHHHHHHHHhcCCC----CCCCCCCcCCHHHHHHHHHHHHHhcCCCcccceEEecccccccc
Confidence            4788999987765 455567788877664332    122333456777777777777776663    3566677777899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHH--HHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQH--LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~--le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      ..++.+++++||.|++..+++......+...|..+..++..+...  ....+....       .++++++++.+++||+|
T Consensus       101 ~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~nP~NPtG  173 (389)
T d2gb3a1         101 LFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFI-------NERTKGIVLSNPCNPTG  173 (389)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGC-------CTTEEEEEEESSCTTTC
T ss_pred             cccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhhhc-------ccCccEEEeCCCCcccc
Confidence            999999999999999999999998888888898877766432110  011111111       24667888899999999


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHH-HH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSY-II  304 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~-~~  304 (457)
                      .+.+   +++|.++|++||+++|.||+|+...+.......   ....++. .+++.|++|.++.+|   ||++++.+ +.
T Consensus       174 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~---~~~~~~~-~~v~~s~sK~~~~~GlRiG~~~~~~~~i~  249 (389)
T d2gb3a1         174 VVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA---LSIESDK-VVVIDSVSKKFSACGARVGCLITRNEELI  249 (389)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG---GGSCCTT-EEEEEESTTTTTCGGGCCEEEECSCHHHH
T ss_pred             ccchHHHHHHHHhhcccCCEEEEEeccccccccccccccc---ccccccc-ccccccccccccCcccceeeeeccchhHH
Confidence            9988   779999999999999999999865554322211   1122233 477889999997665   99888654 44


Q ss_pred             HHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCC
Q psy15447        305 EHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKS  383 (457)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~  383 (457)
                      ....... .  ...+.++....++.+.+...++ .+..++.++++.+.+.+.|++   ..+..+..+..+.++|+.++..
T Consensus       250 ~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~---~~~~~~~~p~~g~~~~~~lp~~  323 (389)
T d2gb3a1         250 SHAMKLA-Q--GRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE---HGLKRFTKPSGAFYITAELPVE  323 (389)
T ss_dssp             HHHHHHH-H--HSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCBCCCSBSSEEEEECSSS
T ss_pred             HHHhhhh-h--ccccccccccccccccccccchhcccccccccccchhhhhhhhh---hccccccCCCceEEEEEeCCCC
Confidence            4333222 1  1222344444444444321111 134667788889999999988   2333344456688888888654


Q ss_pred             cchHHHHHHHHHHHHHHHHc------CeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        384 DDEVASKKLLQTICDMCIQA------GFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       384 ~~~~~~~~~~~~~~~~l~~~------Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                              ...+++++|+++      ||.+.|+..+......+.+++||++.  .++++++++++.|.++++++
T Consensus       324 --------~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~--~~~~~l~~a~~~L~~~lk~f  387 (389)
T d2gb3a1         324 --------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMF  387 (389)
T ss_dssp             --------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             --------CHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHHHh
Confidence                    345677777653      77777765332211223679999975  58999999999999988865

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.7e-25  Score=216.45  Aligned_cols=338  Identities=14%  Similarity=0.119  Sum_probs=235.6

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----Cc-EEEecccHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EE-TALYSFGFSTS  153 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~-~i~~~sG~~a~  153 (457)
                      ++.+||++.+++ ++..++.+++++.+.+++-..   ++....|..++.+.+++.+.+..|.    +. +++++++++++
T Consensus        25 ~~~~i~l~~G~P-d~~~p~~i~~a~~~~~~~~~~---~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al  100 (382)
T d1u08a_          25 QHQAINLSQGFP-DFDGPRYLQERLAHHVAQGAN---QYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL  100 (382)
T ss_dssp             HTTCEECCCSSC-SSCCCHHHHHHHHHHHHTTCC---SCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred             cCCCEEccCCCC-CCCCCHHHHHHHHHHHhcCCC---CCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHHH
Confidence            457799998766 666678899999999876222   2333457777777777777776663    33 55566666899


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCC
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVY  227 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~  227 (457)
                      ..++.+++++||.|++..+++..........|......+..      |++++++.+.           ++++++++.+++
T Consensus       101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~l~~P~  169 (382)
T d1u08a_         101 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS-----------ERTRLVILNTPH  169 (382)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC-----------TTEEEEEEESSC
T ss_pred             HHHHhhcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhc-----------cCccEEEECCCC
Confidence            99999999999999999999988888888888766554432      5667665543           356788888899


Q ss_pred             CCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecH
Q psy15447        228 MNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSS  301 (457)
Q Consensus       228 ~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~  301 (457)
                      ||+|.+.+   +++|.++|++++++++.||++....+..............+++ .|++.|+||.++.+|   ||+++++
T Consensus       170 NPtG~v~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~SK~~~~pG~RiG~~v~~~  248 (382)
T d1u08a_         170 NPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRER-AVAVSSFGKTYHMTGWKVGYCVAPA  248 (382)
T ss_dssp             TTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTT-EEEEEEHHHHTTCGGGCCEEEECCH
T ss_pred             cccccccccccchhhhhhhccccceeeeecchhhccccccccccccccccccCc-EEEEeeccccccCCcccchhhhccc
Confidence            99999998   5677788899999999999987544432111111111011122 488999999997655   9999999


Q ss_pred             HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEe
Q psy15447        302 YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYL  380 (457)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~  380 (457)
                      ++++.+........  .+.+.+...++.++++.-++ ....++.++++.+.+.+.++.    .|+.+..+.++.++|+.+
T Consensus       249 ~~~~~~~~~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~p~gg~~~~~~~  322 (382)
T d1u08a_         249 PISAEIRKVHQYLT--FSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE----SRLEILPCEGTYFLLVDY  322 (382)
T ss_dssp             HHHHHHHHHHHHHT--SSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS----SSCEECCCCBSSEEEEEC
T ss_pred             hhHHHHHhhhcccc--cccccccccccccccccchHHHHHHHHHHHhhhhhhhhhhcc----CCcEEecCCceEEEEEec
Confidence            98887754332111  23355555555555543221 134667788888888888877    788887677788889888


Q ss_pred             cCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      +.....     +..+++++|+ ++||.+.|+..+.. .+.+.+++||++.  .++++++++++.|++
T Consensus       323 ~~~~~~-----d~~e~~~~ll~e~gV~v~PG~~F~~-~~~~~~~~Ris~~--~~~e~l~~al~RL~~  381 (382)
T d1u08a_         323 SAVSTL-----DDVEFCQWLTQEHGVAAIPLSVFCA-DPFPHKLIRLCFA--KKESTLLAAAERLRQ  381 (382)
T ss_dssp             TTTCCS-----CHHHHHHHHHHHSCEECEEGGGGCS-SCCCSCEEEEECC--SCHHHHHHHHHHHTT
T ss_pred             CCCCCC-----CHHHHHHHHHHHCCEEEEcchhhCC-CCCCCCEEEEEEe--CCHHHHHHHHHHHhC
Confidence            742110     3456788775 56999998865432 1234578999985  478999999888765

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=3.5e-25  Score=211.08  Aligned_cols=327  Identities=13%  Similarity=0.135  Sum_probs=207.7

Q ss_pred             eeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEE-EecccHHHHHHHHHh
Q psy15447         81 PCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETA-LYSFGFSTSASAIAA  159 (457)
Q Consensus        81 ~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i-~~~sG~~a~~~ai~a  159 (457)
                      +++||+|+|+.|.  ||+|++|+.++...       ....|+..+.+.++++.+|+++|.+..+ |++||++||..++.+
T Consensus         3 ~~~~f~s~n~~g~--~P~v~~A~~~a~~~-------~~~~~~~~~~~~~l~~~la~~~g~~~~v~f~~sGt~An~~a~~~   73 (345)
T d1v72a1           3 PALGFSSDNIAGA--SPEVAQALVKHSSG-------QAGPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSA   73 (345)
T ss_dssp             CCCBCSCGGGCCC--CHHHHHHHHHTTSS-------CCCSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHT
T ss_pred             CCcCcCCCCCCCC--CHHHHHHHHHHhcc-------CccccCCCHHHHHHHHHHHHHHCCCcEEEECCchHHHHHHHHHH
Confidence            5789999888775  89999998876432       1223567889999999999999998655 568999999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHHH---HHhcCCeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        160 YVKRNDAVFVDENINFAIQTG---LIASRCKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      .+.+++.++.....|.+....   ....+.......     ..+++.+++.+......   .. .....+++....++.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~  149 (345)
T d1v72a1          74 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGD---VH-TTQPACVSITQATEVG  149 (345)
T ss_dssp             SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTC---TT-SCEEEEEEEESSCTTS
T ss_pred             HHhcCCccccccccceeeechhhHHHhcCcccccccccccccccHHHhhhhhcccccc---cc-cccceeeeeecccccc
Confidence            999999999888888775432   334454444432     34788888888653210   01 1222334444444555


Q ss_pred             CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHH
Q psy15447        232 DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHH  307 (457)
Q Consensus       232 ~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~  307 (457)
                      ...+   +.++.++|++||+++++|++++.+..+........ ....+ ..+..+.+.+|+.+..+ +.+..........
T Consensus       150 ~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (345)
T d1v72a1         150 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAE-MTWKA-GVDALSFGATKNGVLAAEAIVLFNTSLATEM  227 (345)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTT-TTGGG-TCCEEEECCGGGTCSSCEEEEESSGGGHHHH
T ss_pred             ccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHH-hhccc-cccccccCccccccccccccccchhhhhhhc
Confidence            5544   67889999999999999999976544332222211 11111 12344333444333333 3334443333332


Q ss_pred             HhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        308 RLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                      .........+.+....+   +.++...+...  .....+..++..++...+.+   .+++.+..+..++++++.++.   
T Consensus       228 ~~~~~~~~~~~~~~~~a---a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~g~~~~~p~~~niv~~~~~~---  298 (345)
T d1v72a1         228 SYRRKRAGHLSSKMRFL---SAQIDAYLTDDLWLRNARKANAAAQRLAQGLEG---LGGVEVLGGTEANILFCRLDS---  298 (345)
T ss_dssp             HHHHHHTTCCCSSTHHH---HHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTT---CTTEEEESCCCSSEEEEEECH---
T ss_pred             cccccccccccchhhHH---hhhhHHHHHHhhhhhhccchhhHHHHHHHHHHh---cCCcEeccCCCccEEEEEcCH---
Confidence            22111111122222222   22233333222  23445555667777777877   688888777788888887642   


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                               ++++.|+++|+.+....       .+.+.+||+++..+|+||||+++++|+++
T Consensus       299 ---------~~~~~L~~~gi~v~~~~-------~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         299 ---------AMIDALLKAGFGFYHDR-------WGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             ---------HHHHHHHHTTCBCBCSS-------SSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             ---------HHHHHHHHcCCCccccC-------CCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence                     46788999999875432       34689999999999999999999999875

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=9.2e-25  Score=213.40  Aligned_cols=326  Identities=17%  Similarity=0.156  Sum_probs=213.1

Q ss_pred             CChhhHHHHHHHHHhcCC-CCCCCC---CcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhh----cCCC
Q psy15447         95 ENPDIEKCAIDCIDKNGV-GSCGPR---GFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAY----VKRN  164 (457)
Q Consensus        95 ~~p~i~~a~~~~l~~~~~-~~~~~~---~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~----~~~g  164 (457)
                      .+|.+.+|+.+.+++... +...+.   ......+..+++++++|+++|.+  ++++++++++++..++.++    .++|
T Consensus        14 ~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~~I~~~~~~t~~l~~~~~~~~~~~~~~g   93 (391)
T d1p3wa_          14 VDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKG   93 (391)
T ss_dssp             CCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHGGGC
T ss_pred             CCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHHHHhhhhhhhcCCC
Confidence            368899999888764321 111010   00112355667889999999976  5667777788877777654    4899


Q ss_pred             CEEEEeCcccHHHHHHH---HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCCh
Q psy15447        165 DAVFVDENINFAIQTGL---IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPL  236 (457)
Q Consensus       165 d~v~~~~~~h~~~~~~~---~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l  236 (457)
                      |.|++....|.+.....   ...|.++..++.+     |++++++.+.           +++++|++++++|++|.+.|+
T Consensus        94 d~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~~~~~i~-----------~~T~lv~is~~~n~tG~~~~~  162 (391)
T d1p3wa_          94 KHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMR-----------DDTILVSIMHVNNEIGVVQDI  162 (391)
T ss_dssp             CEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCC-----------TTEEEEECCSBCTTTCCBCCH
T ss_pred             CEEEEeccccchHHHHHHHHHHcCCEEEEeCCCCCCeEcHHHHHHhCC-----------CCcEEEEEECCCCCCeeECCH
Confidence            99999999999876544   3458899888754     5677777663           467899999999999999999


Q ss_pred             HHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcce
Q psy15447        237 KDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGYC  315 (457)
Q Consensus       237 ~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~~  315 (457)
                      ++|.++|++||+++++|++|++|...         .++...++|+++.|.+|++|+.| |++..+++..........++.
T Consensus       163 ~~I~~~~~~~~~~~ivD~~~~~g~~~---------~d~~~~~~D~~~~s~~k~~g~~g~g~~~~~~~~~~~~~~~~~gg~  233 (391)
T d1p3wa_         163 AAIGEMCRARGIIYHVDATQSVGKLP---------IDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGG  233 (391)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTBTTBC---------CCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSC
T ss_pred             HHHHHHhccCCcEEEEeeccccCCcc---------ccchhccccccccccccccCCCceEEEEEecchhcccCCcccCCc
Confidence            99999999999999999999877542         33444567999999999998765 777776654333321111111


Q ss_pred             -----ecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc--C-CCCeEEEEecCCcch
Q psy15447        316 -----FSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--R-DTPLKYLYLQKSDDE  386 (457)
Q Consensus       316 -----~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~-~~~~~~i~~~~~~~~  386 (457)
                           ..+..+....++....++... ......++++++..++.+.|..   +.+..+...  . ...++.+.+...   
T Consensus       234 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~~~---  307 (391)
T d1p3wa_         234 HERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD---IEEVYLNGDLEHGAPNILNVSFNYV---  307 (391)
T ss_dssp             TTTTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---STTEEECSCTTTSCTTEEEEEETTS---
T ss_pred             cccCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHHHHHHh---hcCeeecccccccCceEEEEEeCCC---
Confidence                 111222222222222222222 2234567778888888888877   455544322  1 234445555443   


Q ss_pred             HHHHHHHHHHHHHHHHcCeeEeccccCccccC--------------CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        387 VASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------------KQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------------~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                           ....+...|  +++.++.+..+.....              ...+.+|++++..+|++|||+++++|+++++.++
T Consensus       308 -----~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr  380 (391)
T d1p3wa_         308 -----EGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLR  380 (391)
T ss_dssp             -----CHHHHHHHT--TTEECBCCCC------CCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----ChHHHHHHh--CCCEEEccccccCCccchhHHHHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                 233455555  3566554433221000              0125799999999999999999999999998875


Q ss_pred             C
Q psy15447        453 Q  453 (457)
Q Consensus       453 ~  453 (457)
                      .
T Consensus       381 ~  381 (391)
T d1p3wa_         381 D  381 (391)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.94  E-value=2e-24  Score=213.63  Aligned_cols=317  Identities=14%  Similarity=0.081  Sum_probs=212.6

Q ss_pred             ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecC
Q psy15447        121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKH  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~  193 (457)
                      .|..++.+++++.+.+..|      .+++++++++++++..++.+++++||.|++..++|......+.. .|.+++.++.
T Consensus        84 ~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~  163 (431)
T d1m7ya_          84 HGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHC  163 (431)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEEC
T ss_pred             cCcHHHHHHHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccc
Confidence            3555666666666666554      23566667777999999999999999999999999887777764 4677776653


Q ss_pred             -------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 -------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 -------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                             .|++.+++.+.+....     ..+++++++.+++||+|.+.+   +++|.++|++||+++|+||+|+...++.
T Consensus       164 ~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~  238 (431)
T d1m7ya_         164 TSSNGFQITETALEEAYQEAEKR-----NLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS  238 (431)
T ss_dssp             CGGGTSCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS
T ss_pred             cchhcccccHHHhhhhhhhhhhc-----cCcceEEEecCccccccccccccccccccccccccCcceeecccccccccCC
Confidence                   2678888887654321     246778889999999999988   7789999999999999999998765543


Q ss_pred             CCC-ccccc---cCCC----CCCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH
Q psy15447        264 TGH-GVTEY---FGVS----TEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL  332 (457)
Q Consensus       264 ~g~-~~~~~---~~~~----~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l  332 (457)
                      ... .+.+.   ....    ..+..+++.|+||.+|.+|   |+++++++++.........+....+.....+++.+...
T Consensus       239 ~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~l~~~  318 (431)
T d1m7ya_         239 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDK  318 (431)
T ss_dssp             SCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCH
T ss_pred             CCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhhhHHHHHHHhccccccccccchhhhhhccc
Confidence            211 11111   0110    0122488999999997554   99999877655443322222111111222222222222


Q ss_pred             HHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEecc
Q psy15447        333 HLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCP  410 (457)
Q Consensus       333 ~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~  410 (457)
                      ...++ ..+.+.+++++.+.+.+.|++    .|+++..+..+.++|+.+...... .......+++++|++ +||.+.|+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~gi~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~l~~~ll~~~gV~v~PG  393 (431)
T d1m7ya_         319 KLTKNYIAENHKRLKQRQKKLVSGLQK----SGISCLNGNAGLFCWVDMRHLLRS-NTFEAEMELWKKIVYEVHLNISPG  393 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHT----TTCEECCCCSSSEEEEECGGGSSS-SSHHHHHHHHHHHHHTSCEECEEG
T ss_pred             hhhhhhhhhhhhhhhhhhhhhhhhhhc----CCcEEecCCceeEEEEECcccccc-CcccCHHHHHHHHHHHCCEEEEec
Confidence            22221 234667788888999999988    899987666788888887642111 001134467888775 59999987


Q ss_pred             ccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        411 SHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       411 ~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+.   ...++++||++. ..++++++++++.|++++++.
T Consensus       394 ~~F~---~~~~~~~Ri~~a-~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         394 SSCH---CTEPGWFRVCFA-NLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             GGGT---CSSTTEEEEECS-SSCHHHHHHHHHHHHHHHHHH
T ss_pred             cccC---CCCCCEEEEEeC-cCCHHHHHHHHHHHHHHHHHh
Confidence            6542   234578999984 357889999999999998763

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.94  E-value=5.3e-26  Score=219.90  Aligned_cols=320  Identities=15%  Similarity=0.161  Sum_probs=208.6

Q ss_pred             cCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccHHHHHHHHHhhcCCCCEE
Q psy15447         91 LSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGFSTSASAIAAYVKRNDAV  167 (457)
Q Consensus        91 l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~ai~a~~~~gd~v  167 (457)
                      .|+.+++.+.++..+.+.++.          |......++++..++.++   .+.++++++|++|+..++.++..+++.|
T Consensus        26 ~gl~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al~~~~~vi   95 (366)
T d2aeua1          26 SGLSGGFLIDEKDKALLNTYI----------GSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILALKPKKVIH   95 (366)
T ss_dssp             SSCCCCCCCCHHHHHHHTSTT----------HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHCCSEEEE
T ss_pred             ccCCCCCCccHHHHHHHHHhc----------CchhhHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHhCCCCEEE
Confidence            455667777777777776652          122345667777777665   3467888999999999999987666666


Q ss_pred             EE-eCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCC-CCCCCChHHHHHHHHH
Q psy15447        168 FV-DENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMN-SADICPLKDILSLRSK  245 (457)
Q Consensus       168 ~~-~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~-~G~i~~l~~i~~l~~~  245 (457)
                      ++ +.++|.++..++++.|++.  ++++|++++++.+.           +++++|++++++|+ ++.+.++++|+++|++
T Consensus        96 ~~~~~~~~~~~~~~~~l~g~~~--v~~~d~e~l~~~i~-----------~~tk~i~~~~p~n~~~~~~~~l~~i~~ia~~  162 (366)
T d2aeua1          96 YLPELPGHPSIERSCKIVNAKY--FESDKVGEILNKID-----------KDTLVIITGSTMDLKVIELENFKKVINTAKN  162 (366)
T ss_dssp             ECSSSSCCTHHHHHHHHTTCEE--EEESCHHHHHTTCC-----------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHH
T ss_pred             EecCCCcchhHHHHHHhcCCeE--ECCCCHHHHHHhcC-----------CCceEEEEEecCCCCcCCHHHHHHHHHHhcc
Confidence            65 4689999999999999875  45678888887764           35678888888775 5567789999999999


Q ss_pred             cCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-CcccEEEecHHHHHHHHhhCCcceecCCCcHHH
Q psy15447        246 YQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SVGGFCVGSSYIIEHHRLSGSGYCFSASLPPFL  324 (457)
Q Consensus       246 ~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (457)
                      ||+++|+||+|+.+.++..+......++     +|+++.|++|+++ ..+||+++++++++.++....  .++.+.+|+.
T Consensus       163 ~~~~~i~De~y~~~~~~~~~~~~~~~~~-----~di~~~S~sK~~~g~~~G~i~~~~~~i~~~~~~~~--~~g~~~~~~~  235 (366)
T d2aeua1         163 KEAIVFVDDASGARVRLLFNQPPALKLG-----ADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGT--KFGLEAQPPL  235 (366)
T ss_dssp             HTCCEEEECTTHHHHHHHTTCCCHHHHT-----CSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHH--TTTCBCCHHH
T ss_pred             CcEEEEEecCccccccccccCCCHhhcC-----ceEEEecccccccccceeEEEecHHHHHHHHHHHh--cccccCCHHH
Confidence            9999999999988777654443332333     4899999999996 467999999999999876542  2344457777


Q ss_pred             HHHHHHHHHHHhhCcHHHHHHHHHHH--------HHHHHhhcccccCCeE--EeccCCCCeEEEEecCCcchHHHHHHHH
Q psy15447        325 AVAANKALHLLKANPSLLTKLREKCN--------TMHSLLSQHKVTQRFL--VQGHRDTPLKYLYLQKSDDEVASKKLLQ  394 (457)
Q Consensus       325 ~aaa~a~l~~~~~~~~~~~~l~~~~~--------~l~~~L~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~  394 (457)
                      +++++++|+.+.  ...+++..++.+        ++...+..   ..+..  .........++.......  ........
T Consensus       236 ~~a~~~aL~tl~--~~r~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  308 (366)
T d2aeua1         236 LAGIYRALKNFN--LERIRKAFERAKNFDLSKIEKLNKELKA---IDDNINIVYERTPTGFVIKRVYKDD--TINIKKLI  308 (366)
T ss_dssp             HHHHHHHHHHCC--HHHHHHHHHHHHHCCCHHHHHHHHHHTT---TCTTEEEEEEECSSEEEEEEEESSH--HHHHHHHH
T ss_pred             HHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHhhhhccccc---cccccCcccccCccchhccCCCcce--eecccCHH
Confidence            777777776432  112222222222        22222222   11211  111222333333332221  11112345


Q ss_pred             HHHHHHHHc-CeeEeccccCccccCCCCCeEEEEecCCCCHH-HHHHHHHHHHHHHHHh
Q psy15447        395 TICDMCIQA-GFAITCPSHLDQEAKKQKPSIRITCNISHTEQ-DMNSLIETLCKSHDIA  451 (457)
Q Consensus       395 ~~~~~l~~~-Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e-di~~~~~~l~~~~~~~  451 (457)
                      +++.+|+++ ||.+.|...    .+.+.+++||+++...+++ +.+++++++.+.++..
T Consensus       309 ~~a~~Ll~~~gV~~ip~~~----~p~~~~~lRis~~~~~~~~i~~d~l~~ai~~~lK~~  363 (366)
T d2aeua1         309 EIGFNLLKNYGIITITVAG----MPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMA  363 (366)
T ss_dssp             HHHHHHHHHHCEECSTTSS----SCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCEEEEECCC----CCCCCCEEEEeccccchhhCCHHHHHHHHHHHHHHH
Confidence            677777765 998766532    1455779999997654443 4566677776666543

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.94  E-value=4.3e-24  Score=209.59  Aligned_cols=325  Identities=15%  Similarity=0.161  Sum_probs=228.2

Q ss_pred             ChhhHHHHHHHHHhcCCCC-CCC-CCcccChHHHHHHHHHHHhhcCCC--c-EEEecccHHHHHHHHHh----hcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNGVGS-CGP-RGFYGTNVVHLDLENDIASFMGLE--E-TALYSFGFSTSASAIAA----YVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~-~~~-~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sG~~a~~~ai~a----~~~~gd~  166 (457)
                      .+.+.+++.+.++++...+ .+. ....-..+..++.++.+++++|.+  + +++++++++++..++..    -.++|+.
T Consensus        35 p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~n~~~~~~~~~~~~~g~~  114 (408)
T d1t3ia_          35 PRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDE  114 (408)
T ss_dssp             CHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCE
T ss_pred             CHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHHHHHHhhccccccCCCCE
Confidence            5778999999887743211 111 111112356777889999999964  4 45555666676655543    3578999


Q ss_pred             EEEeCcccHHHHHHH----HhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH
Q psy15447        167 VFVDENINFAIQTGL----IASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK  237 (457)
Q Consensus       167 v~~~~~~h~~~~~~~----~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~  237 (457)
                      |++....|.+.....    ...|..+..++.+     +.+.+++.+.           +++++|.+.++++.+|.+.|++
T Consensus       115 il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~-----------~~t~lv~i~~~~~~tG~~~p~~  183 (408)
T d1t3ia_         115 IITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLS-----------EKTKLVTVVHISNTLGCVNPAE  183 (408)
T ss_dssp             EEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHCC-----------TTEEEEEEESBCTTTCBBCCHH
T ss_pred             EEeecccchhhhhhhhhhhhccCceEeeeeccccccccHHHhhhccC-----------CCceEEEEecccccccccCcHH
Confidence            999998888755443    4457888777643     4666666542           5778999999999999999999


Q ss_pred             HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhCCcc--
Q psy15447        238 DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSGSGY--  314 (457)
Q Consensus       238 ~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~~~~--  314 (457)
                      +|.++|+++|+++++|.+|+.|...         .++...++|+++.|.+|++|+.| |+++.+++..........++  
T Consensus       184 ~i~~~~~~~g~~~ivDa~q~~g~~~---------id~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~~~p~~~g~~~  254 (408)
T d1t3ia_         184 EIAQLAHQAGAKVLVDACQSAPHYP---------LDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEM  254 (408)
T ss_dssp             HHHHHHHHTTCEEEEECTTTTTTSC---------CCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTS
T ss_pred             HHhhhhhccCceeeeccceeccccc---------ccccccCCceEEeccccccCCCCccccccchhhhhcCCceecCCcc
Confidence            9999999999999999999987542         22222356999999999988765 88888888765543211110  


Q ss_pred             ----------------ee-cCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc-----
Q psy15447        315 ----------------CF-SASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-----  370 (457)
Q Consensus       315 ----------------~~-~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-----  370 (457)
                                      .| .++.+....+++.++++++.+.  +.+.++..++.+++.+.+.+   .+++.+.++     
T Consensus       255 ~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~  331 (408)
T d1t3ia_         255 IAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQ---IPQLRLYGPNPKHG  331 (408)
T ss_dssp             EEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT---CTTEEEESCCGGGS
T ss_pred             cccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHhHHhhhhcc---CccccccCCCcccc
Confidence                            01 2345666666667788877653  34567777888888888887   567766543     


Q ss_pred             CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc---ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        371 RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ---EAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       371 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                      ...+++.+.+...        ...++.+.|.++||.++.+.++..   .....++.+||+++..+|++|||+++++|+++
T Consensus       332 ~~~~iv~f~~~~~--------~~~~v~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~  403 (408)
T d1t3ia_         332 DRAALASFNVAGL--------HASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQAT  403 (408)
T ss_dssp             CBCSEEEEEETTB--------CHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred             CcceEEEEEeCCC--------CHHHHHHHHhhCCcEEecCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHH
Confidence            2256777776653        345788888889999887655432   11123568999999999999999999999999


Q ss_pred             HHHh
Q psy15447        448 HDIA  451 (457)
Q Consensus       448 ~~~~  451 (457)
                      ++-+
T Consensus       404 ~~~f  407 (408)
T d1t3ia_         404 IRFF  407 (408)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8754

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.93  E-value=3.3e-24  Score=211.77  Aligned_cols=313  Identities=12%  Similarity=0.110  Sum_probs=208.1

Q ss_pred             ccChHHHHHHHHHHHhhcC------CCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh-cCCeEEEecC
Q psy15447        121 YGTNVVHLDLENDIASFMG------LEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA-SRCKVQYFKH  193 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g------~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~-~g~~~~~~~~  193 (457)
                      .|..++.+++++.+.+..|      .+++++++++++++..++.+++++||.|++..++|..+...+.. .|.+++.++.
T Consensus        83 ~G~~~LR~aiA~~l~~~~~~~~~~~~e~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~  162 (428)
T d1iaya_          83 HGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHC  162 (428)
T ss_dssp             TCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECC
T ss_pred             cchHHHHHHHHHHHHHHhCCCCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeec
Confidence            3555566666666655544      23566777778999999999999999999999999888777764 4788877753


Q ss_pred             C-------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccC
Q psy15447        194 N-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGS  263 (457)
Q Consensus       194 ~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~  263 (457)
                      .       |+++++..++.....     ..+++++++.+++||+|.+.+   +++|.++|++||++||+||+|+...++.
T Consensus       163 ~~~~~~~~d~~~~~~~~~~~~~~-----~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~  237 (428)
T d1iaya_         163 ESSNNFKITSKAVKEAYENAQKS-----NIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT  237 (428)
T ss_dssp             CTTTTTCCCHHHHHHHHHHHHHT-----TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSS
T ss_pred             ccccccccccccccchhhhhhcc-----CCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCc
Confidence            2       677777666443211     256678888899999999988   6789999999999999999998765543


Q ss_pred             CCCc-cccccC-----CCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHH--HHHHHHH
Q psy15447        264 TGHG-VTEYFG-----VSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFL--AVAANKA  331 (457)
Q Consensus       264 ~g~~-~~~~~~-----~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~aaa~a~  331 (457)
                      .... +....+     ....+..+++.||||.++.+|   |++++ ++.+.+.++....   ++...++..  +++.+..
T Consensus       238 ~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~a~l~~  314 (428)
T d1iaya_         238 PQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSS---FGLVSTQTQYFLAAMLSD  314 (428)
T ss_dssp             SCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHT---TSCCCHHHHHHHHHHTTC
T ss_pred             ccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccchhhhhhhhhc---ccccccccccchhhhhhh
Confidence            2211 111111     111123488999999997544   88877 5666666654322   111112221  1222111


Q ss_pred             HHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeEec
Q psy15447        332 LHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAITC  409 (457)
Q Consensus       332 l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~  409 (457)
                      .+.+++ ..+.+++++++.+.+.+.|+.    .|+++..+..+.++|+.+...... .......++++.|+++ ||.+.|
T Consensus       315 ~~~~~~~~~~~~~~l~~r~~~~~~~L~~----~gi~~~~p~gg~f~w~~l~~~~~~-~~~~~~~~l~~~Ll~~~gV~v~P  389 (428)
T d1iaya_         315 EKFVDNFLRESAMRLGKRHKHFTNGLEV----VGIKCLKNNAGLFCWMDLRPLLRE-STFDSEMSLWRVIINDVKLNVSP  389 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCCBCCCSSSSEEEEECGGGCSS-SSHHHHHHHHHHHHHTSCEECEE
T ss_pred             hccccccccccccccchhHHHHHHHHHh----CCCEEecCCcceEEEEECcccccc-CCCCCHHHHHHHHHHhCCEEEEc
Confidence            122221 134567788888899999987    788877666788888887642110 0011334678888764 999998


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      +..+..   ..++++|+++. ..+++++++++++|++++.+
T Consensus       390 G~~F~~---~~~g~~Ris~a-~~~~~~l~~al~Rl~~~l~~  426 (428)
T d1iaya_         390 GSSFEC---QEPGWFRVCFA-NMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             GGGGTC---SSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred             chhcCC---CCCCEEEEEeC-CCCHHHHHHHHHHHHHHHhh
Confidence            765422   34679999984 35788999999999998864

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=5.5e-24  Score=203.25  Aligned_cols=308  Identities=12%  Similarity=0.083  Sum_probs=213.2

Q ss_pred             CCeeeEEeecC-CccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC-----CcEEEecccHH
Q psy15447         78 NGIPCINFATH-NYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL-----EETALYSFGFS  151 (457)
Q Consensus        78 ~G~~~id~~s~-~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-----~~~i~~~sG~~  151 (457)
                      .++++++++.| |+++.  ++.+.+++.+.+..-...+. + . .|    ..+|++.+|++++.     +++++++++++
T Consensus        17 ~~~d~~~l~~~enp~~~--p~~i~~~~~~~~~~~~~~~y-p-~-~g----~~~Lr~aia~~~~~~~v~~d~I~it~G~~~   87 (334)
T d2f8ja1          17 EKRDKTYLALNENPFPF--PEDLVDEVFRRLNSDALRIY-Y-D-SP----DEELIEKILSYLDTDFLSKNNVSVGNGADE   87 (334)
T ss_dssp             CCCCSEECSSCCCSSCC--CHHHHHHHHHHCCTTGGGSC-C-C-SS----CHHHHHHHHHHHTCSSCCGGGEEEEEHHHH
T ss_pred             cCCCceEEECCCCCCCC--CHHHHHHHHHHhhcchhcCC-C-C-CC----cHHHHHHHHHHhcccCCCcceEEecCcchh
Confidence            57888998766 55443  58899988888765222111 1 1 12    25677777777652     23444444446


Q ss_pred             HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC
Q psy15447        152 TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA  231 (457)
Q Consensus       152 a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G  231 (457)
                      ++..++    +.+|.|++..++|..+...++..|.+++.++.++.....    +..       ..+++++++.+++||+|
T Consensus        88 ~l~~l~----~~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~----~~~-------~~~~~~l~l~nP~NPtG  152 (334)
T d2f8ja1          88 IIYVMM----LMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIP----EVN-------VGEGDVVFIPNPNNPTG  152 (334)
T ss_dssp             HHHHHH----HHSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSCCC----CCC-------CCTTEEEEEESSCTTTC
T ss_pred             HHHHHh----hhccccccccccccccccchhccCCcccccccccccccc----ccc-------cccceEEEecccccccc
Confidence            666554    456899999999999999999999999998864211100    111       14567888888999999


Q ss_pred             CCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc---cEEEecHHHHHHHH
Q psy15447        232 DICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHR  308 (457)
Q Consensus       232 ~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~  308 (457)
                      .+.+.+++.+++ ++++++|+||++.......  . .. ... .++. .|++.|+||.++.+|   ||+++++++++.+.
T Consensus       153 ~~~s~~~l~~~~-~~~~~ii~Dd~~~~~~~~~--~-~~-~~~-~~~~-~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~  225 (334)
T d2f8ja1         153 HVFEREEIERIL-KTGAFVALDEAYYEFHGES--Y-VD-FLK-KYEN-LAVIRTFSKAFSLAAQRVGYVVASEKFIDAYN  225 (334)
T ss_dssp             CCCCHHHHHHHH-TTTCEEEEECTTGGGTCCC--C-GG-GGG-TCSS-EEEEEESTTTSSCTTTCEEEEEECHHHHHHHH
T ss_pred             eeecHHHhhccc-cceeEEeecccchhhcccc--c-cc-ccc-cCce-EEEEecCccccchhhhhhhhcccchHHHHHHH
Confidence            999988887765 5789999999875432211  1 11 111 1223 488999999997555   99999999999887


Q ss_pred             hhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHH
Q psy15447        309 LSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVA  388 (457)
Q Consensus       309 ~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  388 (457)
                      .....+    ..+.....++.+.++..+...+.++.++++++++.+.|++    .|+++. ++.++++++.+...     
T Consensus       226 ~~~~~~----~~s~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~~~-~~~g~f~~~~~~~~-----  291 (334)
T d2f8ja1         226 RVRLPF----NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGYRIT-DSRGNFVFVFMEKE-----  291 (334)
T ss_dssp             HHSCTT----CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH----HTCEEC-CCCSSEEEEECCHH-----
T ss_pred             Hhhccc----ccchhhhhhcccccccccchhhHHHHHHHHHHHHHHHHHH----CCCeEC-CCCceEEEEECCCC-----
Confidence            654322    3455565666666654443345678888899999999998    688876 45677777766542     


Q ss_pred             HHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        389 SKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       389 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                         ...++.+.|+++||.+++.          ++++|+++.   |++|+++++++|++
T Consensus       292 ---~~~~~~~~L~~~GI~vr~~----------~~~vRis~g---~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         292 ---EKERLLEHLRTKNVAVRSF----------REGVRITIG---KREENDMILRELEV  333 (334)
T ss_dssp             ---HHHHHHHHHHHTTEECEEE----------TTEEEEECC---CHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHCCCEECCC----------CCeEEEEcC---CHHHHHHHHHHHhc
Confidence               5668999999999998653          379999985   78999999999875

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=2.4e-23  Score=200.39  Aligned_cols=276  Identities=14%  Similarity=0.115  Sum_probs=194.0

Q ss_pred             HHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhcCCCC-EEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHH
Q psy15447        128 LDLENDIASFMGLE--ETALYSFGFSTSASAIAAYVKRND-AVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHL  199 (457)
Q Consensus       128 ~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~~~gd-~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~l  199 (457)
                      .+|++++|+++|.+  .+++++++.+++..++.+++++|| .|++..++|..+....+..|.++..++..     |++++
T Consensus        59 ~~Lr~~ia~~~gv~pe~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l  138 (354)
T d1fg7a_          59 KAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGI  138 (354)
T ss_dssp             HHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHH
T ss_pred             HHHHHHHHHHhCCChHHeeeccCchHHHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhh
Confidence            58999999999964  556666667999999999999998 68889999999998999999998877643     45555


Q ss_pred             HHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChH---HHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        200 EELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLK---DILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       200 e~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~---~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +..+            .+++++++.+++||+|.+.+-+   .+.+.+ +++.++|+||++........   .......  
T Consensus       139 ~~~~------------~~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~-~~~~~~iidd~~~~f~~~~~---~~~~~~~--  200 (354)
T d1fg7a_         139 SDKL------------DGVKVVYVCSPNNPTGQLINPQDFRTLLELT-RGKAIVVADEAYIEFCPQAS---LAGWLAE--  200 (354)
T ss_dssp             HTSC------------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHH-TTTCEEEEECTTGGGSGGGC---SGGGTTT--
T ss_pred             hhcc------------cccceeeccCCCccceeEeeecccccccccc-cccccccccccchhhccccc---cchhhcc--
Confidence            4432            3467899999999999999854   444444 46777888887643222211   1111111  


Q ss_pred             CCccEEEecCcccccCcc---cEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHH--HHHhhCcHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSVG---GFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKAL--HLLKANPSLLTKLREKCNT  351 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~g---G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l--~~~~~~~~~~~~l~~~~~~  351 (457)
                      ....+++.||||++|.+|   ||+++++++++.+......+    ..+..+..++.+++  +.........+++.+..++
T Consensus       201 ~~~~iv~~S~SK~~~laGlRiGy~i~~~~~i~~l~~~~~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~  276 (354)
T d1fg7a_         201 YPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY----PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREY  276 (354)
T ss_dssp             CTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS----CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEeCCccccCCCccccccccccchhhhhhhhhcCcc----chhhHHHHHHHHHHhhhccccccccchhhhhHHHH
Confidence            222477899999998655   99999999999887655433    22333333333332  2222222345667777888


Q ss_pred             HHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCC
Q psy15447        352 MHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNIS  431 (457)
Q Consensus       352 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~  431 (457)
                      +.+.|.+   +.++....++.++++++.+++.          .++++.|+++||++++....    +..++++||++.  
T Consensus       277 l~~~l~~---~~~~~~~~p~~~~f~~~~~~~~----------~~~~~~L~~~gIlvr~~~~~----~~~~~~lRisig--  337 (354)
T d1fg7a_         277 LIAALKE---IPCVEQVFDSETNYILARFKAS----------SAVFKSLWDQGIILRDQNKQ----PSLSGCLRITVG--  337 (354)
T ss_dssp             HHHHHHH---STTEEEECCCSSSEEEEEETTH----------HHHHHHHHHTTEECEECTTS----TTCTTEEEEECC--
T ss_pred             HHHHHHh---CCCcceeCCCCceEEEEeCCCH----------HHHHHHHHHCCcEEecCCCC----CCCCCEEEEEeC--
Confidence            8888888   4666555567788898887642          46889999999999875431    233689999985  


Q ss_pred             CCHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLC  445 (457)
Q Consensus       432 ~t~edi~~~~~~l~  445 (457)
                       |++|+++++++|+
T Consensus       338 -t~ee~~~~l~aLk  350 (354)
T d1fg7a_         338 -TREESQRVIDALR  350 (354)
T ss_dssp             -CHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHh
Confidence             7999999999886

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.91  E-value=8.6e-22  Score=188.22  Aligned_cols=294  Identities=15%  Similarity=0.180  Sum_probs=212.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.|+++.|.+.+++++||..|+.+++.+++++||.|++....|+.+..-    +...|.++..++..|++.
T Consensus        61 ~nPT~~~LE~~la~LEgg~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~~d~~~  140 (397)
T d1y4ia1          61 GNPTTDALEKKLAVLERGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAGKPEE  140 (397)
T ss_dssp             SCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHH
T ss_pred             CCHHHHHHHHHHHHHhCCccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCCCCHHH
Confidence            4688999999999999999999999999999999999999999999999988876654    345688999999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.++           +++++|++|++.||+..+.++++|+++|+++|+++++|..++...+-+         .+. .+
T Consensus       141 ~~~~i~-----------~~Tklv~~Esp~NP~l~v~Di~~i~~iA~~~gi~~vvDnT~atP~~~~---------Pl~-~G  199 (397)
T d1y4ia1         141 IRAAMR-----------PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQ---------PLQ-LG  199 (397)
T ss_dssp             HHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---------GGG-GT
T ss_pred             HHHhcC-----------CCCcEEEecCCcccceeecccHHHHHHhhcCCceEEecCcccCcccCc---------chh-cC
Confidence            998874           467899999999999999999999999999999999999865432211         111 24


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +||++.|++|.+++    .||+++++++.+...+........+..++|..|..++..|+-+.   .++++..+++..+.+
T Consensus       200 aDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~TL~---lRm~~~~~nA~~lA~  276 (397)
T d1y4ia1         200 ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLG---IRMERHCENALKIAR  276 (397)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred             CCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCcHH---HHHHHHHHHHHHHHH
Confidence            58999999999964    46999999887776543221223466789999998888876554   478889999999999


Q ss_pred             HhhcccccCCeEEeccC--------------CCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cCc
Q psy15447        355 LLSQHKVTQRFLVQGHR--------------DTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HLD  414 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~  414 (457)
                      .|++++.+..+..++-+              .+.++.+.+....      ..+.++++.|.=-.+.+..++      +|.
T Consensus       277 ~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~~------~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~  350 (397)
T d1y4ia1         277 FLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGL------EAGRRMINSVELCLLAVSLGDTETLIQHPA  350 (397)
T ss_dssp             HHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTHH------HHHHHHHHTCSSSEECSCCSCSSCEEECTT
T ss_pred             HHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecCCH------HHHHHHHHcCCccceeeccCcccceeeCcc
Confidence            99984433222222111              2567888776532      133455555431111111111      111


Q ss_pred             c------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy15447        415 Q------------EAKKQKPSIRITCNISHTEQDMNSLIETLCK  446 (457)
Q Consensus       415 ~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~  446 (457)
                      .            .....++.+|+++.....++-++.+-++|++
T Consensus       351 ~~th~~~~~e~r~~~Gi~~~liRlsvGlEd~~DLi~Dl~~AL~~  394 (397)
T d1y4ia1         351 SMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK  394 (397)
T ss_dssp             TTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             ccccccCCHHHHHHcCCCcCEEEEEeccCCHHHHHHHHHHHHHH
Confidence            1            0112367899999876655555555555544

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=3.7e-22  Score=190.67  Aligned_cols=249  Identities=16%  Similarity=0.176  Sum_probs=192.0

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.|+++.|.+.+++++||..|+..++.+++++||.|++....|+.+..-+    .-.|.++.+++..|+++
T Consensus        57 ~nPT~~~LE~~la~LEg~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~~d~~~  136 (392)
T d1gc0a_          57 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQA  136 (392)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHH
T ss_pred             CChHHHHHHHHHHHHhCCcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCccCHHH
Confidence            46788999999999999999999999999999999999999999999888887766543    33488899999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      ++++++           +++++|++|++.||+..+.++++|+++|+++|+++++|..++.+.+-+   .+  .+     +
T Consensus       137 ~~~ai~-----------~~t~lv~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vvDnT~atP~~~~---Pl--~~-----G  195 (392)
T d1gc0a_         137 LEAAMT-----------PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQR---PL--EL-----G  195 (392)
T ss_dssp             HHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCC---GG--GG-----T
T ss_pred             HHHhCC-----------CCCeEEEecccccceeeecchHHHHHHHHhcCCEEEEecCccCccccC---hH--Hh-----C
Confidence            998885           367899999999999999999999999999999999999976543321   11  12     4


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +||++.|.+|.+++    .||.++++++.+...+.......++..++|..|...+..++-+.   .++++..+|+..+.+
T Consensus       196 aDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~~~G~~~~p~da~ll~rgl~TL~---lRm~~~~~nA~~lA~  272 (392)
T d1gc0a_         196 ADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKTLN---LRMDRHCANAQVLAE  272 (392)
T ss_dssp             CSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHH
T ss_pred             CCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHHccCCcCChhhHHHHHhccccHH---HHHHHHHHHHHHHHH
Confidence            58999999999963    46899999888776543222223566789999998888876654   478899999999999


Q ss_pred             HhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        355 LLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      .|++++.+..+..++.              ..+.++.+.+..+.      ..+.++++.|.
T Consensus       273 ~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~~~~------~~~~~f~~~L~  327 (392)
T d1gc0a_         273 FLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGI------GAGRRFMNALQ  327 (392)
T ss_dssp             HHHTCTTEEEEEEC----------------CCTTEEEEEETTHH------HHHHHHHHHCS
T ss_pred             HHHhCCCccEEeeccccCCcccccccccccCCCcEEEEEEeCCH------HHHHHHHHhCC
Confidence            9998543332222211              12567777775432      13455666654

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-22  Score=194.35  Aligned_cols=296  Identities=14%  Similarity=0.145  Sum_probs=208.6

Q ss_pred             hHHHHHHHHHHHhhcCCCc---EEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH--HHhcCCeEEEecC-----
Q psy15447        124 NVVHLDLENDIASFMGLEE---TALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG--LIASRCKVQYFKH-----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~---~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~--~~~~g~~~~~~~~-----  193 (457)
                      .+...++++.|++++|.++   +++..||++++.+++..+..+++.+++....|.+....  ....+..+..+..     
T Consensus        51 ~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (388)
T d1h0ca_          51 YQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGH  130 (388)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCSSCCEEECBSSHHHHHHHHHHHHHC--CBCCBCCTTCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhhccCCceeeecccceeeeeccccccccccccccccCCccc
Confidence            5678889999999999752   34445789999999999999999888777776654322  2333333333332     


Q ss_pred             CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      .|.+.+++.+..          .+++++.+.+..+.+|.+.|+++|.++|++||+++++|.+++.|...         .+
T Consensus       131 ~~~~~~~~~~~~----------~~~~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~~~---------~d  191 (388)
T d1h0ca_         131 YTLQEVEEGLAQ----------HKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTP---------LY  191 (388)
T ss_dssp             CCHHHHHHHHHH----------HCCSEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTTTTSC---------CC
T ss_pred             cchHHHHHHhcc----------CCcceEEEeeeeeccccccCHHHHHHHhhcccccceecccccccccc---------cc
Confidence            256677666654          24568888889999999999999999999999999999999977542         23


Q ss_pred             CCCCCccEEEecCcccccCcc--cEEEecHHHHHHHHhhCC---------------------cceecCCCcHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHRLSGS---------------------GYCFSASLPPFLAVAANK  330 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~aaa~a  330 (457)
                      ++..++|+++.|.+|++++++  |++..++..++.......                     ...+.++.+.....+..+
T Consensus       192 ~~~~~~D~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~  271 (388)
T d1h0ca_         192 MDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRE  271 (388)
T ss_dssp             TTTTTCSEEEEESSSTTCCCTTCEEEEECHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHH
T ss_pred             ccccccceecccccccccCCCceEEEeecHHHHHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHH
Confidence            434567999999999996543  567788777766532110                     011233455566666777


Q ss_pred             HHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEec-c---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-
Q psy15447        331 ALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG-H---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-  403 (457)
Q Consensus       331 ~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~-~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-  403 (457)
                      +++.+.+.  +...++..++.+++++.+.+    .++.... +   ....++.+.+++..       +..++.+.|+++ 
T Consensus       272 al~~~~~~g~~~~~~~~~~l~~~l~~~~~~----~g~~~~~~~~~~rs~~i~~~~~p~~~-------~~~~~~~~L~~~~  340 (388)
T d1h0ca_         272 SLALIAEQGLENSWRQHREAAAYLHGRLQA----LGLQLFVKDPALRLPTVTTVAVPAGY-------DWRDIVSYVIDHF  340 (388)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCBSSCSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHH
T ss_pred             HHHHHHHhccccccccccchhHHHHHHHhh----cCcccccCCHHHcCCeEEEEECCCCC-------CHHHHHHHHHhcC
Confidence            77776543  45667777888888888887    3433321 1   12345667775544       456788888776 


Q ss_pred             CeeEeccccCccccCCCCCeEEEE-ecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        404 GFAITCPSHLDQEAKKQKPSIRIT-CNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       404 Gi~v~~~~~~~~~~~~~~~~lRi~-~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                      ||.++.+..+     ..++.+||+ ++..+|++|||+++++|++++++++++
T Consensus       341 gI~v~~G~~~-----~~~~~iRis~~g~~~t~edid~li~aL~~~L~~l~k~  387 (388)
T d1h0ca_         341 DIEIMGGLGP-----STGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKK  387 (388)
T ss_dssp             CEECEECCGG-----GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHSCCC
T ss_pred             CEEEeCCchh-----hcCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence            9988766542     235689999 677889999999999999999998764

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.90  E-value=2.9e-21  Score=187.19  Aligned_cols=310  Identities=15%  Similarity=0.120  Sum_probs=215.2

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      ++-++++.+.++. |...        ..+...++|+++|+++|.+.+++++||++|+..++.++ .++||.|+++...|.
T Consensus        12 ~~~~~~~~~~~~~-~~~~--------~G~~v~~~E~~la~~~g~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~~~~   82 (376)
T d1mdoa_          12 AEELAAVKTVLDS-GWIT--------TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWV   82 (376)
T ss_dssp             HHHHHHHHHHHHH-TCCS--------SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCH
T ss_pred             HHHHHHHHHHHhc-CCCc--------CCHHHHHHHHHHHHHHCcCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEeccccc
Confidence            5556788888876 3211        23567899999999999999999999999999999998 899999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++..++...|..++.++.+      |+++|++.+.+           ++++|++.+++   |...++++|.++|++||+.
T Consensus        83 ~~~~ai~~~g~~pv~~d~~~~~~~~d~~~l~~~i~~-----------~tkaIi~~h~~---G~~~~~~~i~~i~~~~~i~  148 (376)
T d1mdoa_          83 STLNMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-----------QTKAIIPVHYA---GAPADLDAIYALGERYGIP  148 (376)
T ss_dssp             HHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-----------TEEEECCBCGG---GCCCCHHHHHHHHHHHTCC
T ss_pred             ccccchhccccceeeecccccccCCCHHHHHHhcCC-----------CCeEEEEeCCC---CCccchhHHHHHHHhcCce
Confidence            9999999999998887643      78999888753           45777766554   7789999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEec-HHHHHHHHhhC-Ccc----------
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGS-SYIIEHHRLSG-SGY----------  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~-~~~~~~~~~~~-~~~----------  314 (457)
                      ||+|++|++|..-. +.    ..|-  .  |..+.||  +|.++ +.||+++++ +++.+.++... .+.          
T Consensus       149 vIeD~a~a~g~~~~-~~----~~g~--~--g~~~~Sf~~~K~l~~g~GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~  219 (376)
T d1mdoa_         149 VIEDAAHATGTSYK-GR----HIGA--R--GTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSG  219 (376)
T ss_dssp             BCEECTTCTTCEET-TE----ETTS--S--SEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC-------
T ss_pred             EEeccchhccCeeC-Ce----eccc--c--cCccccCCCcCCCCCCCCCEEEEechhHHHHHHhhcccCCcccccccccc
Confidence            99999999875311 11    1111  1  2334455  68885 456776665 55555553221 110          


Q ss_pred             -----------eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-----CCeEEE
Q psy15447        315 -----------CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-----TPLKYL  378 (457)
Q Consensus       315 -----------~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-----~~~~~i  378 (457)
                                 .+...++.+.++.+...|+.+++   ..++.+++.+++.+.|++   .....+.....     ...+.+
T Consensus       220 ~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~~~~---~~~~r~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~~~~~~  293 (376)
T d1mdoa_         220 GRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDA---LNARRAAIAAQYHQAMAD---LPFQPLSLPSWEHIHAWHLFII  293 (376)
T ss_dssp             ----CCEESSCCCBCCCCHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHHHHHT---SSCEECCCCSSCEECCCSCEEE
T ss_pred             cccccccchhcccccccchhhhhhhhhhhhhhhH---HHHHHhhhhhhhhhhccc---cccccccccccccccccccccc
Confidence                       12234678888888777766543   677888899999999988   34443322211     122223


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccc-------cCC---------CCCeEEEEecCCCCHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQE-------AKK---------QKPSIRITCNISHTEQDMNSLIE  442 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-------~~~---------~~~~lRi~~~~~~t~edi~~~~~  442 (457)
                      .+.....    .....++.+.|.++||.++....|...       ...         ....+.+.++..+|++|++++++
T Consensus       294 ~~~~~~~----~~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~  369 (376)
T d1mdoa_         294 RVDEARC----GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVIT  369 (376)
T ss_dssp             ECCHHHH----SSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHH
T ss_pred             ccccccc----hhhHHHHHHHHHHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHH
Confidence            2221100    001346899999999988654332210       000         14568888888899999999999


Q ss_pred             HHHHHH
Q psy15447        443 TLCKSH  448 (457)
Q Consensus       443 ~l~~~~  448 (457)
                      +|++++
T Consensus       370 ~i~~i~  375 (376)
T d1mdoa_         370 ALHQIA  375 (376)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999875

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=9.5e-23  Score=203.55  Aligned_cols=316  Identities=14%  Similarity=0.096  Sum_probs=201.9

Q ss_pred             ccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCC---------CEEEEeCcccHHHHHHHHhcCCeEEEe
Q psy15447        121 YGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRN---------DAVFVDENINFAIQTGLIASRCKVQYF  191 (457)
Q Consensus       121 ~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~g---------d~v~~~~~~h~~~~~~~~~~g~~~~~~  191 (457)
                      ||..+...+||+++++++|.+.+++++||++|+..+++++++++         +.+.....+|..+......+|..+..+
T Consensus        70 Y~~~~~~~~le~~~a~l~G~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~G~~~~~~  149 (467)
T d2v1pa1          70 FSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNV  149 (467)
T ss_dssp             SSSCHHHHHHHHHHHHHTCCSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEEC
T ss_pred             hcCCchHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHHHcCCeeeec
Confidence            55678889999999999999999999999999999999876544         456677778888888899999887764


Q ss_pred             c---------------CCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCC-CCCC---hHHHHHHHHHcCcEEEE
Q psy15447        192 K---------------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSA-DICP---LKDILSLRSKYQARIFV  252 (457)
Q Consensus       192 ~---------------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G-~i~~---l~~i~~l~~~~g~~li~  252 (457)
                      +               ..|++++++.+++...       +.++++++|++++..| .+.|   +++|+++|++||++||+
T Consensus       150 ~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-------~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~~  222 (467)
T d2v1pa1         150 YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-------NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVM  222 (467)
T ss_dssp             BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCG-------GGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred             ccccccccccccccccCCCHHHHHHHHhhcCc-------cccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEEE
Confidence            3               2478999999987652       4677899999998755 4444   78999999999999999


Q ss_pred             EcCcccccccCCCCccccccCCCC--------CCccEEEecCcccccC-cccEEEecHHHHHHH----Hhh---CCccee
Q psy15447        253 DESVSFGTLGSTGHGVTEYFGVST--------EEVDMIIGSLEHALGS-VGGFCVGSSYIIEHH----RLS---GSGYCF  316 (457)
Q Consensus       253 DEa~~~g~~g~~g~~~~~~~~~~~--------~~~Di~~~s~sK~lg~-~gG~v~~~~~~~~~~----~~~---~~~~~~  316 (457)
                      |+++.+|.....+.....+.+..+        ..+|++..|.+|.+++ .||+++++++.+...    +..   ..+...
T Consensus       223 D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (467)
T d2v1pa1         223 DSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPT  302 (467)
T ss_dssp             ECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCC
T ss_pred             echhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCceeEEecchhhhhHHHhhcccccccccCcc
Confidence            999876532111111111222110        2358888899999964 467777765433222    111   111112


Q ss_pred             cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEec----CCcchHHHHHH
Q psy15447        317 SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQ----KSDDEVASKKL  392 (457)
Q Consensus       317 ~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~  392 (457)
                      ....+...+++....+.. ...++..++..++.+++.+.|++    .+..+.. .......+...    .......  ..
T Consensus       303 ~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~----~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~--~~  374 (467)
T d2v1pa1         303 YGGLEGGAMERLAVGLYD-GMNLDWLAYRIAQVQYLVDGLEE----IGVVCQQ-AGGHAAFVDAGKLLPHIPADQF--PA  374 (467)
T ss_dssp             CCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHH----TTCCEEE-ECSSCEEEEHHHHSTTSCGGGC--HH
T ss_pred             hhhhHHHHHHHHHHHhHH-hhhHHHHHHHHHHHHHHHHHHHh----cCCcccC-CCccceeecchhhcCCcchhhh--hh
Confidence            222333333333333333 23345778888999999999988    4544432 22332222211    1100000  01


Q ss_pred             HHHHHHHHHHcCeeEeccccCcc--------ccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        393 LQTICDMCIQAGFAITCPSHLDQ--------EAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       393 ~~~~~~~l~~~Gi~v~~~~~~~~--------~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      .....+.+.+.||.......+..        ..+...+.+|++++ ..+|+||||+++++|+++.+..
T Consensus       375 ~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~~  442 (467)
T d2v1pa1         375 QALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_dssp             HHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred             HHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            12234445667886542221110        12334578999875 5779999999999999998754

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.90  E-value=3.6e-22  Score=199.29  Aligned_cols=351  Identities=12%  Similarity=0.045  Sum_probs=209.5

Q ss_pred             CCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHH
Q psy15447         78 NGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAI  157 (457)
Q Consensus        78 ~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai  157 (457)
                      .|+.+|||.|..+.+.     +.++..+.+.. |.      ..|+..+...+|++++++++|.+.+++++||++|+..++
T Consensus        40 ~~~~~id~~sd~~t~~-----~~~~~~a~~~~-gd------~~y~~~~~~~~le~~~a~l~g~~~~~~~~sGt~A~~~a~  107 (465)
T d1ax4a_          40 SSAVYIDLLTDSGTNA-----MSDHQWAAMIT-GD------EAYAGSRNYYDLKDKAKELFNYDYIIPAHQGRGAENILF  107 (465)
T ss_dssp             GGGCSEECSCSSSCCC-----EEHHHHHHHHT-CC------CCSSSCHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHH
T ss_pred             ccCeeeecccccchhh-----hhHHHHHHHhh-hh------hhhccChHHHHHHHHHHHHHCCCEEEECCCcHHHHHHHH
Confidence            4678999987544221     22332233332 21      124456777899999999999999999999999999999


Q ss_pred             HhhcCCCC-------EEEEeCcccHHHHHHHHhcCCeEEEec---------------CCCHHHHHHHHHhhchhcccCCC
Q psy15447        158 AAYVKRND-------AVFVDENINFAIQTGLIASRCKVQYFK---------------HNNMQHLEELLRQQDERDTLNSK  215 (457)
Q Consensus       158 ~a~~~~gd-------~v~~~~~~h~~~~~~~~~~g~~~~~~~---------------~~d~~~le~~l~~~~~~~~~~~~  215 (457)
                      ++++++++       .++.....|..+.......|.......               ..|++++++++++...       
T Consensus       108 ~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~-------  180 (465)
T d1ax4a_         108 PVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA-------  180 (465)
T ss_dssp             HHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG-------
T ss_pred             HHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHcCCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhcc-------
Confidence            98865433       344555555556666677776665432               1389999999987652       


Q ss_pred             CccEEEEEecCCCCCCCC-CC---hHHHHHHHHHcCcEEEEEcCccccccc----CCCCcc-ccccCCCC---CCccEEE
Q psy15447        216 VTKKFIIVEGVYMNSADI-CP---LKDILSLRSKYQARIFVDESVSFGTLG----STGHGV-TEYFGVST---EEVDMII  283 (457)
Q Consensus       216 ~~~~~vi~e~v~~~~G~i-~~---l~~i~~l~~~~g~~li~DEa~~~g~~g----~~g~~~-~~~~~~~~---~~~Di~~  283 (457)
                      ..+++++++++++.+|.. .|   +++|+++|++||++||+||++..|..+    +.+... ....++.+   ...|++.
T Consensus       181 ~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s  260 (465)
T d1ax4a_         181 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALT  260 (465)
T ss_dssp             GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEE
T ss_pred             ccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeE
Confidence            456788888888776544 33   789999999999999999998754321    100000 00111100   1237888


Q ss_pred             ecCcccccCc-ccEEEecHH--HHHHHHhh-CCcceecC--CCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhh
Q psy15447        284 GSLEHALGSV-GGFCVGSSY--IIEHHRLS-GSGYCFSA--SLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       284 ~s~sK~lg~~-gG~v~~~~~--~~~~~~~~-~~~~~~~~--~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~  357 (457)
                      .|.+|.+++. ||+++.++.  ........ .....+++  .......+++...+.. ...++..++..++.+++.+.|+
T Consensus       261 ~s~~k~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~e-~~~~~~~~~~~~~~~~l~~~L~  339 (465)
T d1ax4a_         261 MSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEE-GTEEEYLHYRIGQVKYLGDRLR  339 (465)
T ss_dssp             EETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             eecccCcccccceeEeecchHHHHHhhhccccccccCCCcchhhHHHHHHHhhhhHH-hhhHHHHHHHHHHHHHHHHHHH
Confidence            8888888654 567776643  22222111 00111111  1222222222222221 1224466777788999999999


Q ss_pred             cccccCCeEEeccCCCCeEEEEecCCcc--hHHHHHHHHHHHHHHHHcCeeEeccccCcc--------ccCCCCCeEEEE
Q psy15447        358 QHKVTQRFLVQGHRDTPLKYLYLQKSDD--EVASKKLLQTICDMCIQAGFAITCPSHLDQ--------EAKKQKPSIRIT  427 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~--------~~~~~~~~lRi~  427 (457)
                      +    .++.+..+.....+.+....-..  ............+.+.+.||......++..        ..+...+.+|++
T Consensus       340 ~----~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRla  415 (465)
T d1ax4a_         340 E----AGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLT  415 (465)
T ss_dssp             H----TTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEE
T ss_pred             h----hcCccccCCCcceeeeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEe
Confidence            8    67666655555555544322100  000011222345556677987654433221        112335689998


Q ss_pred             e-cCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        428 C-NISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       428 ~-~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      + ...+|+||||+++++|+++.+...
T Consensus       416 lP~~~~T~eeiD~vv~~l~~v~~~~~  441 (465)
T d1ax4a_         416 IARRVYTNDHMDYIADALIGLKEKFA  441 (465)
T ss_dssp             CCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5 467899999999999999887654

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.90  E-value=3.7e-22  Score=199.05  Aligned_cols=320  Identities=13%  Similarity=0.032  Sum_probs=194.4

Q ss_pred             cccChHHHHHHHHHHHhhcCCCcEEEecccHH-HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhc-CCeEEEec--CC-
Q psy15447        120 FYGTNVVHLDLENDIASFMGLEETALYSFGFS-TSASAIAAYVKRNDAVFVDENINFAIQTGLIAS-RCKVQYFK--HN-  194 (457)
Q Consensus       120 ~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~-a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~-g~~~~~~~--~~-  194 (457)
                      .........++++.+|+++|.++++|+++|++ +|.+++.+++++||.|++++.+|.++..+.... +.......  .+ 
T Consensus        61 l~~~~~~i~eae~~~A~~~ga~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~~~~~~~~  140 (462)
T d1c4ka2          61 LLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNP  140 (462)
T ss_dssp             TTTTBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECT
T ss_pred             ccCCCHHHHHHHHHHHHHhCCCeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCceeeeccccc
Confidence            34456778999999999999999999999975 567778999999999999999999998765544 43332211  11 


Q ss_pred             ------------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccccccc
Q psy15447        195 ------------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLG  262 (457)
Q Consensus       195 ------------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g  262 (457)
                                  +.+.+++.+.+...+...  ..++..+++.+..+..|.+.|+++|.++|++||++|++||+|+.+...
T Consensus       141 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~g~~l~vD~A~~~~~~~  218 (462)
T d1c4ka2         141 YGFIGGIYDSDFDEKKIRELAAKVDPERAK--WKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQF  218 (462)
T ss_dssp             TCCEEEECGGGSCHHHHHHHTTTSSHHHHT--CSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGS
T ss_pred             ccccCCCChHHhhHHHHHhhhhhhcHHhhh--ccCCceeEEEEeeeeccchhhHHHHHHHHHHcCCEEEEechhhccccc
Confidence                        122233222211110001  123345555566678899999999999999999999999999876532


Q ss_pred             CCC-Cc----cccccCCCCCCccEEEecCcccccCc-ccEE-EecHHHH---------HHHHhhCCcceecCCCcHHHHH
Q psy15447        263 STG-HG----VTEYFGVSTEEVDMIIGSLEHALGSV-GGFC-VGSSYII---------EHHRLSGSGYCFSASLPPFLAV  326 (457)
Q Consensus       263 ~~g-~~----~~~~~~~~~~~~Di~~~s~sK~lg~~-gG~v-~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a  326 (457)
                      ... +.    .....+.. ..+|+++.|+||++|+. +|.+ ..++..+         +.++.. .....+++++....+
T Consensus       219 ~~~~~~~~~~~g~~~~~~-~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~~~~~~~~~~~~~~~~-~~~~~t~sp~~~~~a  296 (462)
T d1c4ka2         219 IPMMRNSSPLLIDDLGPE-DPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNS-FNLFMSTSPFYPMYA  296 (462)
T ss_dssp             SGGGGGGCTTSCCCCCTT-SCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCCHHHHHHH-HHHHSCSSCCHHHHH
T ss_pred             cCcCCcchhhcccccccc-CCccEEEEecCcccccccceEEEEeccccccccchhhhHHHHHHh-hhhcccCCchHHHHH
Confidence            111 11    11112222 46799999999999864 4444 3333222         111111 112223444555555


Q ss_pred             HHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccC---------CeEEec----------------cC--------
Q psy15447        327 AANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQ---------RFLVQG----------------HR--------  371 (457)
Q Consensus       327 aa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~---------~~~~~~----------------~~--------  371 (457)
                      ...++..++..  ..++.++..++.+++++.++++....         +.....                +.        
T Consensus       297 sl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  376 (462)
T d1c4ka2         297 ALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEG  376 (462)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTT
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccc
Confidence            55555655543  23566778888999999887632110         000000                00        


Q ss_pred             -CCCe-------EEEEecCCc----chHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHH
Q psy15447        372 -DTPL-------KYLYLQKSD----DEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       372 -~~~~-------~~i~~~~~~----~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~  439 (457)
                       ....       +.+..+.-.    ...........+.+.|.++||.+....         .+.+|++++..+|++|+|+
T Consensus       377 ~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~e~~~---------~~~i~~~~s~~~T~edid~  447 (462)
T d1c4ka2         377 YGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSD---------LNSILFLMTPAETPAKMNN  447 (462)
T ss_dssp             CCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEEC---------SSEEEEECCTTCCHHHHHH
T ss_pred             cCccceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCeeeccC---------CCeEEEEecCCCCHHHHHH
Confidence             0000       112111100    000000024567888899999654322         4789999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q psy15447        440 LIETLCKSHDIAV  452 (457)
Q Consensus       440 ~~~~l~~~~~~~~  452 (457)
                      ++++|+++.+...
T Consensus       448 li~aL~ei~r~~~  460 (462)
T d1c4ka2         448 LITQLLQLQRLIE  460 (462)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999877653

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.89  E-value=1e-20  Score=181.02  Aligned_cols=248  Identities=15%  Similarity=0.119  Sum_probs=189.6

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----HhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----IASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||++||++.|.+.+++++||..|+..++.+++++||.|++....|+.+..-+    ...|..+..++..+.+.
T Consensus        65 ~nPt~~~LE~~la~LEgg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~~~~~~  144 (398)
T d1qgna_          65 GNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGA  144 (398)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHH
T ss_pred             CChHHHHHHHHHHHHhCCceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccccccchhh
Confidence            46888999999999999999999999999999999999999999999999888876543    34467788887777776


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      .++.+..          +++++|++|++.||+..+.++++|+++|+++|+++|+|...+...+-+         .+ ..+
T Consensus       145 ~~~~~~~----------~~t~~v~~EspsNP~l~v~Di~~ia~ia~~~g~~~vVDnT~atP~~~~---------Pl-~~G  204 (398)
T d1qgna_         145 LELALNQ----------KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQK---------AL-ALG  204 (398)
T ss_dssp             HHHHHHH----------SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---------TT-TTT
T ss_pred             hhhhhcc----------ccceEEEccCccccccccchHHHHHHHHhhcCCEEEecceeeccccCC---------ch-hhC
Confidence            6555443          467899999999999999999999999999999999999865432211         12 135


Q ss_pred             ccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~  354 (457)
                      +||++.|++|.+|+    .||.++++++.+..++...  ..++..++|..|...+..++-+.   .++++..+|+..+.+
T Consensus       205 aDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~~--~~~G~~l~p~~a~ll~rgl~TL~---lRm~~~~~nA~~lA~  279 (398)
T d1qgna_         205 ADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLH--HILGGALNPNAAYLIIRGMKTLH---LRVQQQNSTALRMAE  279 (398)
T ss_dssp             CSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHGGGHH---HHHHHHHHHHHHHHH
T ss_pred             CCEEEEechhhcCcccceeehhhcchhhhhhhhhhhc--ccCCCcCCHHHHHHHHhcchHHH---HHHHHHHHHHHHHHH
Confidence            69999999999964    4688899988888776532  34566789999888877765553   478899999999999


Q ss_pred             HhhcccccCCeEEeccC--------------CCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        355 LLSQHKVTQRFLVQGHR--------------DTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      .|++++.+..+..++-+              .+.++.+.+..+.      ..+.++++.|.
T Consensus       280 ~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g~~------~~a~~f~~~L~  334 (398)
T d1qgna_         280 ILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL------LTTAKFVDALK  334 (398)
T ss_dssp             HHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH------HHHHHHHHHCS
T ss_pred             HHHhCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecCCH------HHHHHHHHcCC
Confidence            99985433222222111              2567777776543      14556776653

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.89  E-value=5e-22  Score=196.43  Aligned_cols=347  Identities=11%  Similarity=0.054  Sum_probs=214.8

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHh
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAA  159 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a  159 (457)
                      ..+||+-|....     ....++...++.. |      .-.||..+...+||+++++++|.+.+++++||+.|+..++++
T Consensus        42 ~v~iDl~sDs~t-----~am~~~~~aa~~~-G------Dd~Y~~dpt~~~lE~~~a~l~G~e~al~~~SGt~An~~a~~~  109 (456)
T d1c7ga_          42 DIYIDLLTDSGT-----NAMSDKQWAGMMI-G------DEAYAGSENFYHLEKTVKELFGFKHIVPTHQGRGAENLLSQL  109 (456)
T ss_dssp             GCSEECSCSSSC-----CCEEHHHHHHTTS-C------CCCSSSCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHH
T ss_pred             ceeeEcccCCCc-----ccchHHHHHHHhc-c------chhccCCchHHHHHHHHHHHhCCCeEEECCCHHHHHHHHHHH
Confidence            467898775432     1233333333321 1      123556788899999999999999999999999999999999


Q ss_pred             hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEec---------------CCCHHHHHHHHHhhchhcccCCCCccEEEEEe
Q psy15447        160 YVKRNDAVFVDENINFAIQTGLIASRCKVQYFK---------------HNNMQHLEELLRQQDERDTLNSKVTKKFIIVE  224 (457)
Q Consensus       160 ~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~---------------~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e  224 (457)
                      ++++||.|+.+...+. ....+...|.......               ..|++.|++.|++...       ..+.+++++
T Consensus       110 l~~~Gd~Vi~~~~f~~-~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~-------~~~~~i~~e  181 (456)
T d1c7ga_         110 AIKPGQYVAGNMYFTT-TRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGA-------ENIAYICLA  181 (456)
T ss_dssp             HCCTTEEEEESSCCHH-HHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG-------GGEEEEEEE
T ss_pred             hcCCCCeEecCcchHH-HHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCC-------ccceeEEee
Confidence            9999999987765443 3344555565544221               2389999999987652       466788899


Q ss_pred             cCCCCCC-CCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC--------CCccEEEecCcccccC
Q psy15447        225 GVYMNSA-DICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST--------EEVDMIIGSLEHALGS  292 (457)
Q Consensus       225 ~v~~~~G-~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~--------~~~Di~~~s~sK~lg~  292 (457)
                      .++|+.| ...+   +++|+++|++||+.+++|+++.+|.....+.....+.+...        ..+|+++.|++|.++.
T Consensus       182 ~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~  261 (456)
T d1c7ga_         182 VTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLV  261 (456)
T ss_dssp             SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCC
T ss_pred             ecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEeccccccc
Confidence            8888755 4444   67899999999999999999875431000000000111110        2348889999999975


Q ss_pred             -cccEEEec-HHHHHHHHhhC---CcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEE
Q psy15447        293 -VGGFCVGS-SYIIEHHRLSG---SGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLV  367 (457)
Q Consensus       293 -~gG~v~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~  367 (457)
                       .||+++++ +++.+..+...   .++...+..+...+.+....+.... ..+..++..++.++|.+.|.+    .|+.+
T Consensus       262 ~~GG~i~~~~~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~-~~~~l~~r~~~~~~L~e~L~~----~g~~v  336 (456)
T d1c7ga_         262 NIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAM-QYEYIEHRVKQVRYLGDKLRE----AGVPI  336 (456)
T ss_dssp             SSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHH----TTCCB
T ss_pred             cceeEEEcCCHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHh----ccCCc
Confidence             46777665 55666554321   1111112233333333333333332 234556666778999999998    67777


Q ss_pred             eccCCCCeEEEEecCCcc-hHHHHHHHHHHHHH-HHHcCeeEeccccCcc--------ccCCCCCeEEEEec-CCCCHHH
Q psy15447        368 QGHRDTPLKYLYLQKSDD-EVASKKLLQTICDM-CIQAGFAITCPSHLDQ--------EAKKQKPSIRITCN-ISHTEQD  436 (457)
Q Consensus       368 ~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~-l~~~Gi~v~~~~~~~~--------~~~~~~~~lRi~~~-~~~t~ed  436 (457)
                      ..+.+++.+.+....-.. ..........+..+ +.+.||...+.+.+..        ......+.+|++++ ..+|++|
T Consensus       337 v~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T~e~  416 (456)
T d1c7ga_         337 VEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAH  416 (456)
T ss_dssp             CSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCCHHH
T ss_pred             ccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCCHHH
Confidence            666667766654321000 00000023344433 4566987654332211        11123456999987 4569999


Q ss_pred             HHHHHHHHHHHHHHh
Q psy15447        437 MNSLIETLCKSHDIA  451 (457)
Q Consensus       437 i~~~~~~l~~~~~~~  451 (457)
                      ||+++++|+++.+..
T Consensus       417 iD~Vae~i~~v~~~~  431 (456)
T d1c7ga_         417 MDVVADGIIKLYQHK  431 (456)
T ss_dssp             HHHHHHHHHHHHTTG
T ss_pred             HHHHHHHHHHHHhhh
Confidence            999999999987643

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=5.6e-21  Score=182.13  Aligned_cols=290  Identities=14%  Similarity=0.168  Sum_probs=206.1

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHh----cCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLIA----SRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~----~g~~~~~~~~~d~~~  198 (457)
                      .++....||++||++.|.+.++.++||..|+. ++.+++++||.|++....|+.+..-++.    .|..+..++..++++
T Consensus        47 ~nPt~~~le~~la~LE~~~~a~~fsSGMaAis-all~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~  125 (380)
T d1ibja_          47 GNPTRDALESLLAKLDKADRAFCFTSGMAALS-AVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDE  125 (380)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHH-HHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHH
T ss_pred             CChHHHHHHHHHHHHcCCceEEehhhHHHHHH-HHHHhhCCCCEEEEEecccccccchhhhhhccccccccccCcchHHH
Confidence            46778999999999999999999999999985 6778899999999999999988766543    477888888899999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      ++++++           +++++|++|++.||+..+.++++|+++|+++|+++|+|..++.+..-+         .++ .+
T Consensus       126 ~~~ai~-----------~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDnT~atP~~~~---------Pl~-~G  184 (380)
T d1ibja_         126 VAAAIG-----------PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSR---------PLE-LG  184 (380)
T ss_dssp             HHHHCC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCC---------GGG-TT
T ss_pred             HHHHhc-----------cCccEEEeccccccccccccHHHHHHHHHHcCCeEEeecccccccccc---------ccc-cC
Confidence            988874           467899999999999999999999999999999999999875433211         111 34


Q ss_pred             ccEEEecCcccccC----cccEEEec-HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVGS-SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +||++.|++|.+++    .||+++.+ +.+.+.++...  ..++..++|..|...+..++-+.   .++++..+|+..+.
T Consensus       185 aDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~--~~~G~~l~p~~a~ll~rgl~Tl~---lRm~~~~~nA~~lA  259 (380)
T d1ibja_         185 ADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEGSGLAPFDCWLCLRGIKTMA---LRIEKQQENARKIA  259 (380)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHH--HHTTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CCEEEecccceeccccCccccccccchhhHHHHHHhhc--cccCCcCCHHHHHHHHhcchhhh---hhHHHHHHHHHHHH
Confidence            69999999999964    45776554 55666554332  23455689999988888876554   47899999999999


Q ss_pred             HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH--HcCeeEe----ccccC
Q psy15447        354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI--QAGFAIT----CPSHL  413 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~--~~Gi~v~----~~~~~  413 (457)
                      +.|++++.+..+..++-              ..+.++.+.+++..       .+.++.+.|.  ..++-+.    ...+|
T Consensus       260 ~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~~~-------~a~~f~d~l~l~~~a~SlG~~~SLi~~p  332 (380)
T d1ibja_         260 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVA-------LSKHLVETTKYFSIAVSFGSVKSLISMP  332 (380)
T ss_dssp             HHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHH-------HHHHHHHHCSSSEECSCCCSSSCEEECT
T ss_pred             HHHHhCCCeeEEeccccccCccccccccccccccccccccccHHH-------HHHHHHHhCCcCeEeeccCCccccccCc
Confidence            99998654444433221              12456666555432       4556666653  1111110    00111


Q ss_pred             cc------------ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        414 DQ------------EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       414 ~~------------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..            .....++.+|+++.+.    +.|.+++-|+++++.
T Consensus       333 ~~~th~~~~~e~r~~~Gi~~~lvRlSvGlE----~~eDLi~Dl~qAl~~  377 (380)
T d1ibja_         333 CFMSHASIPAEVREARGLTEDLVRISAGIE----DVDDLISDLDIAFKT  377 (380)
T ss_dssp             TTTTTCSCCSSSSSSSSCCTTCEEEECCSS----CHHHHHHHHHHHHHS
T ss_pred             hhhhhhcCCHHHHHHcCCCcCeEEEEeccC----CHHHHHHHHHHHHHh
Confidence            11            0112357899999874    445555666665543

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=1.5e-20  Score=182.25  Aligned_cols=330  Identities=14%  Similarity=0.115  Sum_probs=210.6

Q ss_pred             eEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcc--cChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHH
Q psy15447         82 CINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFY--GTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAI  157 (457)
Q Consensus        82 ~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~--g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai  157 (457)
                      |+|.++..+    ..+.+.+++.+.+++....+. .....  -..+..++.++++++++|.+  ++++.+++++++..++
T Consensus         4 yld~a~~~~----~p~~v~ea~~~~~~~~~~np~-~~~~~~~~~~~~~~~aR~~ia~l~~~~~~~i~~~~~~T~~l~~~~   78 (376)
T d1eg5a_           4 YFDNNATTR----VDDRVLEEMIVFYREKYGNPN-SAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWIL   78 (376)
T ss_dssp             ECBTTTCCC----CCHHHHHHHHHHHHTCCCCTT-CSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHH
T ss_pred             EEECccccc----CCHHHHHHHHHHHHHcCCCCc-cccHHHHHHHHHHHHHHHHHHHHcCCCCCcEEEECCHHHHHHhhh
Confidence            555554322    357799999988876421111 11111  12445566788999999965  5677788888877776


Q ss_pred             Hh----hcCCCCEEEEeCcccHHHHHH---HHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        158 AA----YVKRNDAVFVDENINFAIQTG---LIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       158 ~a----~~~~gd~v~~~~~~h~~~~~~---~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      ..    ...+|+.|+.....|......   +...|.+++++|.+     |++++++.+.           +++++|++.+
T Consensus        79 ~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~~~~id~~~l~~~i~-----------~~t~lv~is~  147 (376)
T d1eg5a_          79 KTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD-----------EDTFLVSIMA  147 (376)
T ss_dssp             HHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC-----------TTEEEEEEES
T ss_pred             hcccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCCCCeECHHHHHHhcC-----------CCceEEEEEC
Confidence            53    457788888888877765543   45558899888743     6777777764           4678999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHH
Q psy15447        226 VYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSY  302 (457)
Q Consensus       226 v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~  302 (457)
                      +++++|.+.|++++.++|+.+  ++++++|.+|+.|...         .++...++|++++|++|++|+.| |++..+++
T Consensus       148 v~~~tG~~~~~~~i~~~~~~~~~~~~~~vD~~q~~g~~~---------~d~~~~~~D~~~~s~~K~~gp~G~~~l~~~~~  218 (376)
T d1eg5a_         148 ANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIP---------FSLEKLEVDYASFSAHKFHGPKGVGITYIRKG  218 (376)
T ss_dssp             BCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSC---------CCCTTTCCSEEEEEGGGGTSCTTCEEEEECTT
T ss_pred             CccccceeeeehhhhhhhhhcccCceeEEEeeecccccc---------ccccccCccceecccceeecCCCceeEEeccC
Confidence            999999999999999998665  9999999999987653         22323456999999999998766 55555543


Q ss_pred             HHHHHHhhCCc-----ceecCCCcHHHHHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCC
Q psy15447        303 IIEHHRLSGSG-----YCFSASLPPFLAVAANKALHLLKAN-PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDT  373 (457)
Q Consensus       303 ~~~~~~~~~~~-----~~~~~~~~~~~~aaa~a~l~~~~~~-~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~  373 (457)
                      ..  +++...+     ....+..+......+.+........ ...........+++.+.|..    ........   ...
T Consensus       219 ~~--~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~  292 (376)
T d1eg5a_         219 VP--IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN----LGAHIITPLEISLP  292 (376)
T ss_dssp             SC--CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT----TTCEECSCTTSBCT
T ss_pred             cc--cCCcccCCCCcccccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhcccccc----cccccccccccccc
Confidence            21  1111110     0111223444433333333333222 22344555567777777766    33223222   123


Q ss_pred             CeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC--------------CCCCeEEEEecCCCCHHHHHH
Q psy15447        374 PLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK--------------KQKPSIRITCNISHTEQDMNS  439 (457)
Q Consensus       374 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--------------~~~~~lRi~~~~~~t~edi~~  439 (457)
                      .+..+.+.+.        ....+...|.++||.++.+.++.....              ...+.+|++++..+|++|||+
T Consensus       293 ~~~~~~~~~~--------~~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~~~~iRiS~~~ynt~edid~  364 (376)
T d1eg5a_         293 NTLSVSFPNI--------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDY  364 (376)
T ss_dssp             TEEEEECTTC--------CHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHH
T ss_pred             ceeeeccCCC--------CHHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccCCCEEEEecCCCCCHHHHHH
Confidence            4455555543        345777888889999887654322000              012469999999999999999


Q ss_pred             HHHHHHHHHHH
Q psy15447        440 LIETLCKSHDI  450 (457)
Q Consensus       440 ~~~~l~~~~~~  450 (457)
                      ++++|+++++-
T Consensus       365 l~~~L~~iv~~  375 (376)
T d1eg5a_         365 FLKKIEEILSF  375 (376)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999998863

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.5e-20  Score=177.68  Aligned_cols=247  Identities=13%  Similarity=0.125  Sum_probs=185.2

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||++|+++.|.+.++.++||..|+..++.+++++||.|++....|+.+..-    +...|..+..++..|.++
T Consensus        48 ~nPt~~~le~~la~LEgg~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~~d~~~  127 (384)
T d1cs1a_          48 GNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA  127 (384)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccccCCCHHH
Confidence            4688899999999999999999999999999999999999999999998888776543    334467788888889999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEE  278 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~  278 (457)
                      +++.+..           ++++|++|++.||+..+.++++|+++|+++|+++|+|..++.+.+-+         .++ .+
T Consensus       128 ~~~~~~~-----------~t~~v~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~~~---------Pl~-~G  186 (384)
T d1cs1a_         128 LRAALAE-----------KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQN---------PLA-LG  186 (384)
T ss_dssp             HHHHHHT-----------CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCC---------GGG-GT
T ss_pred             HHhhccc-----------cccEEEEeccccccceeccHHHHhhhhhhcCcEEEEeccccCccccc---------ccc-cC
Confidence            9888864           56799999999999999999999999999999999999875432211         011 24


Q ss_pred             ccEEEecCcccccC----cccEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        279 VDMIIGSLEHALGS----VGGFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       279 ~Di~~~s~sK~lg~----~gG~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      +||++.|.+|.+++    .||++++ ++.+.+.++...  ..++..++|..|...+..|+-+.   .++++..+|+..+.
T Consensus       187 aDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~--~~~G~~~~p~~a~ll~rgL~TL~---lRm~~~~~nA~~lA  261 (384)
T d1cs1a_         187 ADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA--NNIGVTGGAFDSYLLLRGLRTLV---PRMELAQRNAQAIV  261 (384)
T ss_dssp             CSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHH--HHHTCBCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CCEEEEccccccccCCCcccccccCCchhhhhhhhhhh--hhhhhccccccHHHHhhccchhH---HHHHHHHHHHHHHH
Confidence            59999999999964    4577766 455555544322  23455679998888877766553   47889999999999


Q ss_pred             HHhhcccccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHH
Q psy15447        354 SLLSQHKVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCI  401 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~  401 (457)
                      +.|+.++.+..+..++-              ..+.++.+.+....      ..+.++++.|.
T Consensus       262 ~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~~------~~a~~f~~~L~  317 (384)
T d1cs1a_         262 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDE------QTLRRFLGGLS  317 (384)
T ss_dssp             HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCH------HHHHHHHHTCS
T ss_pred             HhcccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecchH------HHHHHHHHhCC
Confidence            99998443322222111              12567777776543      13445655553

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.88  E-value=9e-22  Score=192.51  Aligned_cols=328  Identities=11%  Similarity=-0.002  Sum_probs=206.5

Q ss_pred             eEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC---CCcEEEecccH----
Q psy15447         82 CINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG---LEETALYSFGF----  150 (457)
Q Consensus        82 ~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g---~~~~i~~~sG~----  150 (457)
                      .||++-+.|..-.    ..+.|++|..+.+.+-..  .++....|..++.+++++.+.+..+   .+..++++.|.    
T Consensus        30 ~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~~~~~~g  107 (401)
T d7aata_          30 KMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMD--KEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG  107 (401)
T ss_dssp             CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCC--CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             cEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCC--CCCCCCCCCHHHHHHHHHHHhccCCcccCcCceEEeccchHHH
Confidence            4888766443322    235677777776665322  1233345666666666666655444   22333332221    


Q ss_pred             --HHHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        151 --STSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       151 --~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                        .++..++++++++||.|++..++|..+...++..|.+++.++..       +++.+.+.+....        ++++++
T Consensus       108 ~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i  179 (401)
T d7aata_         108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIP--------EKSIIL  179 (401)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSC--------TTCEEE
T ss_pred             HHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEeccccccccccHHHHHHHHhcCC--------CceEEE
Confidence              35566678889999999999999999999999999999887642       5667766665433        467899


Q ss_pred             EEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCcc---ccccCCCCCCccEEEecCcccccCcc-
Q psy15447        222 IVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGV---TEYFGVSTEEVDMIIGSLEHALGSVG-  294 (457)
Q Consensus       222 i~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~---~~~~~~~~~~~Di~~~s~sK~lg~~g-  294 (457)
                      ++.+++||||.+.+   +++|.++|++|++++|.||+|....++......   ....... +. .+++.|++|.++..| 
T Consensus       180 ii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~-~~-~~~~~s~sk~~~~~G~  257 (401)
T d7aata_         180 LHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG-ID-VVLSQSYAKNMGLYGE  257 (401)
T ss_dssp             EESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT-CC-CEEEEECTTTSCCGGG
T ss_pred             EecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhh-cc-cceeEeccccceeecc
Confidence            99999999999998   679999999999999999999876554311101   0111111 12 366789999997665 


Q ss_pred             --cEEEecHHHHHHHHhhC------CcceecCCCcHHHHHHHHHHHH---H----HhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        295 --GFCVGSSYIIEHHRLSG------SGYCFSASLPPFLAVAANKALH---L----LKANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       295 --G~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aaa~a~l~---~----~~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                        ||++++..+++......      ....++. .+.+.++++...+.   .    ....+..+++++++++.+.+.|+++
T Consensus       258 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  336 (401)
T d7aata_         258 RAGAFTVICRDAEEAKRVESQLKILIRPMYSN-PPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKE  336 (401)
T ss_dssp             CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSS-CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccceeecchHHHHHHHHHHHHHHHHhhccccc-cchHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              99988866555432111      0111222 23333333332222   1    1111346677888888888888873


Q ss_pred             cccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHH
Q psy15447        360 KVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMN  438 (457)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~  438 (457)
                      .....+.+..+..+.++|+.+  ..          +++++|+ ++||++.++             .||+++. .++++|+
T Consensus       337 ~~~~~~~~~~~~~G~F~~~~l--s~----------e~~~~L~~e~gV~~~pg-------------~Ris~a~-~~~~~i~  390 (401)
T d7aata_         337 GSSHNWQHITDQIGMFCFTGL--KP----------EQVERLTKEFSIYMTKD-------------GRISVAG-VASSNVG  390 (401)
T ss_dssp             TCCSCCHHHHHCCSSEEECCC--CH----------HHHHHHHHHHCEECCTT-------------CEEEGGG-CCTTTHH
T ss_pred             CCCCCcceECCCCeEEEecCC--CH----------HHHHHHHHhCCEEECCC-------------cEEEecc-CCHHHHH
Confidence            211223333355666666533  21          3456665 469987642             5998754 6888999


Q ss_pred             HHHHHHHHHH
Q psy15447        439 SLIETLCKSH  448 (457)
Q Consensus       439 ~~~~~l~~~~  448 (457)
                      +++++|+++.
T Consensus       391 ~la~ai~~v~  400 (401)
T d7aata_         391 YLAHAIHQVT  400 (401)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.88  E-value=2.6e-21  Score=191.32  Aligned_cols=296  Identities=10%  Similarity=0.022  Sum_probs=195.0

Q ss_pred             HHHHHHHhhcCCCcE-EEec-ccHHHHHHHHHhhc--CCCCEEEEeCcccHHHHHHHHhcCCeEEEec--------CCCH
Q psy15447        129 DLENDIASFMGLEET-ALYS-FGFSTSASAIAAYV--KRNDAVFVDENINFAIQTGLIASRCKVQYFK--------HNNM  196 (457)
Q Consensus       129 ~l~~~la~~~g~~~~-i~~~-sG~~a~~~ai~a~~--~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~--------~~d~  196 (457)
                      ++...+++++|.+.+ .++. +|++++.+++.+..  .+++.|++++..|.+..+++...|.....++        ..|+
T Consensus       117 ~~~~~~~~~~g~~~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~  196 (434)
T d2z67a1         117 KILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPV  196 (434)
T ss_dssp             HHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCH
T ss_pred             HHHHHHHHhcCCCcceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCH
Confidence            344556777887654 4444 44456666666653  3788999999999999999999998877654        3589


Q ss_pred             HHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        197 QHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       197 ~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      ++|++.+++...      .+.+.+|++..++++.|.+.|+++|.++|++||+++|+|++|+.+.... +. .....+.  
T Consensus       197 ~~l~~~i~~~~~------~~~~~~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~-~~-~~~~~~~--  266 (434)
T d2z67a1         197 EDIENAIKKEIE------LGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYY-LE-KLKKAFK--  266 (434)
T ss_dssp             HHHHHHHHHHHH------TTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHH-HH-HHHHHHT--
T ss_pred             HHHHHHHHhhhh------cCCceEEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhc-cc-ccccccc--
Confidence            999999987543      1466788888888889999999999999999999999999997543110 00 1111111  


Q ss_pred             CCccEEEecCcccccCc-c-cEE-EecHHHHHHHHhhCCcceecCCC-cHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGSV-G-GFC-VGSSYIIEHHRLSGSGYCFSASL-PPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~~-g-G~v-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      .++|+++.|++|.++.+ | |++ ..++..++.+....   .++++. +...+.+++..+... ...+..++..++.+++
T Consensus       267 ~~~D~~~~s~hK~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~l~~~~~~-g~~~~~~~~~~~a~~l  342 (434)
T d2z67a1         267 YRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSY---PGRASATPVVNTLVSLLSMGSK-NYLELVKNQKNSKKLL  342 (434)
T ss_dssp             SCCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTTS---CSCBCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CCcceEEEcCccccccCCCccccccCcHHHHHHHHhhc---ccccccchHHHHHHHHHHHHHh-cchhHHHHHHHHHHHH
Confidence            24689999999998643 3 344 45566666665332   222222 333333333332221 2235677888888999


Q ss_pred             HHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc------ccCCCCCeEEE
Q psy15447        353 HSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ------EAKKQKPSIRI  426 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~------~~~~~~~~lRi  426 (457)
                      .+.|+++....+..+...+....+.+.+..         ...++...|.++||.......+..      ......+++|+
T Consensus       343 ~~~L~~l~~~~g~~ll~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~  413 (434)
T d2z67a1         343 DELLNDLSKKTGGKFLDVESPIASCISVNS---------DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVM  413 (434)
T ss_dssp             HHHHHHHHHHSSCCBCCCCCSSEEEEECSS---------CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEE
T ss_pred             HHHHHHhhhhcCceecCCCCCceeeeecCC---------CHHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEE
Confidence            888877443345555433333333333333         345688889999986543322211      01123578999


Q ss_pred             EecCCCCHHHHHHHHHHHHHH
Q psy15447        427 TCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       427 ~~~~~~t~edi~~~~~~l~~~  447 (457)
                      +++..+|+||||+++++|+++
T Consensus       414 ~~s~~~T~edID~~i~~L~kI  434 (434)
T d2z67a1         414 NAAIGVRTEDIVNSVSKLEKI  434 (434)
T ss_dssp             ECCTTCCHHHHHHHHHHHHTC
T ss_pred             ecCCCCCHHHHHHHHHHHhcC
Confidence            999999999999999999863

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.88  E-value=6e-21  Score=179.35  Aligned_cols=286  Identities=16%  Similarity=0.214  Sum_probs=206.4

Q ss_pred             HHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHHHHHHHH
Q psy15447        129 DLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQHLEELLR  204 (457)
Q Consensus       129 ~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~le~~l~  204 (457)
                      .||+++|++.|.+.++.++||..|+..++.+++++||+|++.+..|+.+..-    ++-.|.++..++..|++.+++.++
T Consensus         2 aLE~~la~Leg~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~~d~~~~~~~i~   81 (331)
T d1pffa_           2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK   81 (331)
T ss_dssp             HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred             HHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecccchhhHhhhcc
Confidence            5899999999999999999999999999999999999999998888776543    455688999999999999988874


Q ss_pred             hhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHH-HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEE
Q psy15447        205 QQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLR-SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMII  283 (457)
Q Consensus       205 ~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~-~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~  283 (457)
                                 +++++|++|++.||+..+.+++++++++ +++|+++|+|...+.+..-+         .+ ..++||++
T Consensus        82 -----------~~t~~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDnT~atp~~~~---------pl-~~GaDiVv  140 (331)
T d1pffa_          82 -----------PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTN---------PL-DLGVDIVV  140 (331)
T ss_dssp             -----------TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCC---------GG-GGTCSEEE
T ss_pred             -----------cccceeeeecccccccccccchhhhhhhhcccCceEEeecccccccccc---------cc-ccCCCEEE
Confidence                       4678999999999999999999999986 67899999999865332211         11 12459999


Q ss_pred             ecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcc
Q psy15447        284 GSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQH  359 (457)
Q Consensus       284 ~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~  359 (457)
                      .|++|.+++    .||+++++++.....+.......++..++|..|...+..++-+..   ++++..+|+..+.+.|+++
T Consensus       141 ~S~TKy~~Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~Tl~~---Rm~~~~~nA~~lA~~L~~h  217 (331)
T d1pffa_         141 HSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDM---RVKRAAENAQKVAEFLHEH  217 (331)
T ss_dssp             EETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHC
T ss_pred             ecchhhcCCCCccccccccccccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhhC
Confidence            999999964    468888887776665544434456777899999999888877653   7899999999999999986


Q ss_pred             cccCCeEEecc--------------CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccc------cCcc----
Q psy15447        360 KVTQRFLVQGH--------------RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPS------HLDQ----  415 (457)
Q Consensus       360 ~~~~~~~~~~~--------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~----  415 (457)
                      +.+..+..++-              ..+.++.+.+++..       .+.++++.|.=-++.+..+.      +|..    
T Consensus       218 p~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~~~-------~~~~f~d~l~lf~~~~SlG~~~SLi~~p~~~~h~  290 (331)
T d1pffa_         218 KAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLE-------KAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHA  290 (331)
T ss_dssp             TTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH-------HHHHHHHTCSSSEECSSCCSSSCEEECHHHHTST
T ss_pred             CcEEeeccccccCccHHHHHhhcccccCcccceeeccHH-------HHHHHHHhCCcceecccCCCCceeEeCccccccc
Confidence            65544443321              12567888876532       45556665531111111111      1110    


Q ss_pred             --------ccCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy15447        416 --------EAKKQKPSIRITCNISHTEQDMNSLIETLC  445 (457)
Q Consensus       416 --------~~~~~~~~lRi~~~~~~t~edi~~~~~~l~  445 (457)
                              .....++.+|+++.+...++=++.+-++|+
T Consensus       291 ~~~~e~~~~~Gi~~~liRlsvGlE~~~DLi~Dl~~AL~  328 (331)
T d1pffa_         291 GVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALD  328 (331)
T ss_dssp             TSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHhcCCCcCeEEEEeeeCCHHHHHHHHHHHHH
Confidence                    011236789999987554444444444444

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.87  E-value=3.6e-20  Score=179.64  Aligned_cols=314  Identities=11%  Similarity=0.103  Sum_probs=218.4

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccH
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINF  175 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~  175 (457)
                      .+-.+++.+.|+.-..       ++...+...++|+++|+++|.+.++.++||+.|+..+++++ .++||.|+++..++.
T Consensus        13 ~~~~~~~~~~l~~g~~-------~~~~g~~v~~fE~~~a~~~g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~~t~~   85 (384)
T d1b9ha_          13 DAERNGLVRALEQGQW-------WRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFI   85 (384)
T ss_dssp             HHHHHHHHHHHHTSCC-------BTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCT
T ss_pred             HHHHHHHHHHHHcCCe-------eecCCHHHHHHHHHHHHHHCcCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEeccccc
Confidence            4567788888876211       11134568899999999999999999999999999999987 689999999999999


Q ss_pred             HHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcE
Q psy15447        176 AIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQAR  249 (457)
Q Consensus       176 ~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~  249 (457)
                      ++..++...|.+++.++.+      |++.+++.+.           +++++|++.+++   |...+++++.++|++||+.
T Consensus        86 a~~~ai~~~g~~p~~~d~~~~~~~~d~~~~~~~i~-----------~~tk~i~~~~~~---g~~~d~~~i~~~~~~~~i~  151 (384)
T d1b9ha_          86 SSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAAVT-----------PRTKVIMPVHMA---GLMADMDALAKISADTGVP  151 (384)
T ss_dssp             HHHHHHHHTTCEEEEECBCTTTCCBCHHHHHHHCC-----------TTEEEECCBCGG---GCCCCHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccccccccccccchhhhccccc-----------cccccccccccc---ccccccccchhhhhhhhhh
Confidence            9999999999988876633      6888877653           356777665544   6788999999999999999


Q ss_pred             EEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEec-HHHHHHHHh---hCCc-------c-
Q psy15447        250 IFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGS-SYIIEHHRL---SGSG-------Y-  314 (457)
Q Consensus       250 li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~-~~~~~~~~~---~~~~-------~-  314 (457)
                      +|.|.+|++|..-. |... ..+|      |+.+.||  +|.++ +.||+++++ +++.+.++.   .+..       + 
T Consensus       152 lieD~a~a~ga~~~-g~~~-g~~g------~~~~~Sf~~~K~i~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~  223 (384)
T d1b9ha_         152 LLQDAAHAHGARWQ-GKRV-GELD------SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYF  223 (384)
T ss_dssp             BCEECTTCTTCEET-TEEG-GGSS------SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCC
T ss_pred             hhhhhceecccccC-CEec-Cccc------ccceecccccccccccccchhhhhhHHHHHHHHHHHhcCCCCcccccccc
Confidence            99999999876421 2211 1122      4445566  88884 456776654 555555432   1100       1 


Q ss_pred             ----eecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccC------CCCeEEEEecCCc
Q psy15447        315 ----CFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR------DTPLKYLYLQKSD  384 (457)
Q Consensus       315 ----~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~------~~~~~~i~~~~~~  384 (457)
                          .+...++++.++.++..|+.+++   ..++-+++.+++.+.|++   ++++......      ......+.+....
T Consensus       224 ~~~~G~n~rms~l~Aaig~~qL~~ld~---~~~~R~~~~~~y~~~L~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  297 (384)
T d1b9ha_         224 HKIAGSNMRLNEFSASVLRAQLARLDE---QIAVRDERWTLLSRLLGA---IDGVVPQGGDVRADRNSHYMAMFRIPGLT  297 (384)
T ss_dssp             CCSCCCBCBCBHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHHT---STTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred             ccccccccccccchhhhhhhhhhhccc---chhhhhhhhhhhhhhhhc---ccccccccccccccccccccccceecccc
Confidence                12233788888888887766543   567777888899998887   4555432211      1223444454332


Q ss_pred             chHHHHHHHHHHHHHHHHcCeeEeccccCcccc--------CC----------------CCCeEEEEecCCCC-HHHHHH
Q psy15447        385 DEVASKKLLQTICDMCIQAGFAITCPSHLDQEA--------KK----------------QKPSIRITCNISHT-EQDMNS  439 (457)
Q Consensus       385 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--------~~----------------~~~~lRi~~~~~~t-~edi~~  439 (457)
                      .     ....++.+.|.++||-++....|....        ..                ....+.+..+..+| ++|+++
T Consensus       298 ~-----~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~  372 (384)
T d1b9ha_         298 E-----ERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHA  372 (384)
T ss_dssp             H-----HHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHH
T ss_pred             c-----ccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHHH
Confidence            1     134579999999999887653332100        00                02457887777787 679999


Q ss_pred             HHHHHHHHHHH
Q psy15447        440 LIETLCKSHDI  450 (457)
Q Consensus       440 ~~~~l~~~~~~  450 (457)
                      ++++|++++..
T Consensus       373 I~~~i~~~l~~  383 (384)
T d1b9ha_         373 TAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhh
Confidence            99999998865

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=2.4e-20  Score=176.57  Aligned_cols=340  Identities=15%  Similarity=0.148  Sum_probs=227.9

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccCh--HHHHHHHHH-HHhhcCCCcE-EEecccHHHH
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTN--VVHLDLEND-IASFMGLEET-ALYSFGFSTS  153 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~--~~~~~l~~~-la~~~g~~~~-i~~~sG~~a~  153 (457)
                      ++.|++. |-|+    -+|.+.++....+ .+|.-++.+-|.+.|+.  +..+.|+.+ ..++||.+.+ +-..||+.||
T Consensus        26 ~~~i~LiaSEN~----~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a~~anVqp~SGs~AN  101 (416)
T d1dfoa_          26 EEHIELIASENY----TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN  101 (416)
T ss_dssp             HHSEECCTTCCC----CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHH
T ss_pred             HcCceEecCccc----CCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCCCcceeecccCccHH
Confidence            3556664 3333    2588888887766 46777776666655542  444444433 3448898866 5578999999


Q ss_pred             HHHHHhhcCCCCEEEEeCcccHHHHHHH---Hhc--CCeEEEec-----CCCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        154 ASAIAAYVKRNDAVFVDENINFAIQTGL---IAS--RCKVQYFK-----HNNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       154 ~~ai~a~~~~gd~v~~~~~~h~~~~~~~---~~~--g~~~~~~~-----~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      .+++.++++|||.|+.....|+.....-   ..+  ..+...++     ..|.+++++..++.+          .++|++
T Consensus       102 ~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~IDyd~l~~~a~~~k----------PklIi~  171 (416)
T d1dfoa_         102 FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHK----------PKMIIG  171 (416)
T ss_dssp             HHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCSSSSBCHHHHHHHHHHHC----------CSEEEE
T ss_pred             HHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCCccCccHHHHHHHHHHhc----------cceEEe
Confidence            9999999999999999877765533211   111  12334443     238999999988753          356666


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec--
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS--  300 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~--  300 (457)
                      ..  +......|+++++++|++.|++|++|.+|-.|.+..   +.   +.-+-...|++++|.+|+| |+.||++.++  
T Consensus       172 G~--S~y~r~~d~~~~reiad~vga~l~~D~aH~~GLIa~---g~---~~sP~~~aDvvt~tThKtlrGPrggiI~~~~~  243 (416)
T d1dfoa_         172 GF--SAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAA---GV---YPNPVPHAHVVTTTTHKTLAGPRGGLILAKGG  243 (416)
T ss_dssp             EC--SSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH---TS---SCCCTTTSSEEEEESSSTTCCCSCEEEEESSC
T ss_pred             cc--cccccccCHHHHHHHHHhcCceEEcchhhhhcceec---cc---cCCcccccceeeeehhhcccCCCceEEEeccc
Confidence            42  334567789999999999999999999997775521   11   1111134599999999999 6779999875  


Q ss_pred             -HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhh-CcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEE
Q psy15447        301 -SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKA-NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKY  377 (457)
Q Consensus       301 -~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~  377 (457)
                       +++.+.+...-.+...++..+...++.+.+-.+.+.. ..+..+++.+|++.|.+.|.+    .|+++... .+++++.
T Consensus       244 ~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~----~G~~iv~ggTdnHlvl  319 (416)
T d1dfoa_         244 SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLE----RGYKVVSGGTDNHLFL  319 (416)
T ss_dssp             CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEE
T ss_pred             hHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHh----CCcccccCCCCCceeE
Confidence             5676777655555555544434443333333332322 246788999999999999999    89998743 5678888


Q ss_pred             EEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHHh
Q psy15447        378 LYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       378 i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      +.+.+..      .....+.+.|.+.||.+....-|.. ..+..++.+||..+    ....++|++++.+.|.++++..
T Consensus       320 vdl~~~~------~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~~~  392 (416)
T d1dfoa_         320 VDLVDKN------LTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSI  392 (416)
T ss_dssp             EECGGGT------CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             EEecccC------CCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHHcC
Confidence            8875421      0234556667777999875554432 22334578999875    3468899999999999887643

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.87  E-value=9.2e-20  Score=174.70  Aligned_cols=214  Identities=16%  Similarity=0.181  Sum_probs=174.7

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.|+++-|.+.++.++||..|+..++.+++++||.|++....|+.+..-    +.-.|..+..++..|+++
T Consensus        57 ~nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~~d~~~  136 (394)
T d1e5ea_          57 GNPTVSNLEGKIAFLEKTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGE  136 (394)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTH
T ss_pred             CCHHHHHHHHHHHHHhCCcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCCCCHHH
Confidence            5788999999999999999999999999999999999999999999999988776543    445588899999999999


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH-HcCcEEEEEcCcccccccCCCCccccccCCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS-KYQARIFVDESVSFGTLGSTGHGVTEYFGVSTE  277 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~-~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~  277 (457)
                      +++.++           +++++|++|++.||+..+.+++++.++++ ++|+++|+|..++...+-+       -+   ..
T Consensus       137 ~~~~i~-----------~~t~lv~~Etp~NP~l~v~Di~~~~~~~~~~~g~~vvvDnT~atP~~~~-------Pl---~~  195 (394)
T d1e5ea_         137 VKKHMK-----------PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITN-------PV---DF  195 (394)
T ss_dssp             HHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCC-------GG---GG
T ss_pred             HHHhhc-----------ccccEEEEeccCCcceeeehhhhhhhccccccCeEEEecCcccCcccCC-------ch---hc
Confidence            998875           36689999999999999999999988776 4689999999865332211       11   12


Q ss_pred             CccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHH
Q psy15447        278 EVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       278 ~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~  353 (457)
                      ++||++.|.+|.+++    .||+++++++.....+........+..++|..+...+..|+-+.   .++++..+|+..+.
T Consensus       196 GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~TL~---lRm~r~~~nA~~lA  272 (394)
T d1e5ea_         196 GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLN---IRMKAESENAMKVA  272 (394)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHHH
T ss_pred             CCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchhHH---HHHHHHHHHHHHHH
Confidence            458999999999964    46888999888777665443334566789999998888876554   47899999999999


Q ss_pred             HHhhccc
Q psy15447        354 SLLSQHK  360 (457)
Q Consensus       354 ~~L~~~~  360 (457)
                      +.|++++
T Consensus       273 ~~L~~hp  279 (394)
T d1e5ea_         273 EYLKSHP  279 (394)
T ss_dssp             HHHHTCT
T ss_pred             HHHhhcC
Confidence            9999854

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.87  E-value=1e-20  Score=185.13  Aligned_cols=328  Identities=13%  Similarity=0.057  Sum_probs=207.9

Q ss_pred             CeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCc--ccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHH
Q psy15447         79 GIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGF--YGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSA  154 (457)
Q Consensus        79 G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~  154 (457)
                      +.-|+|.++.   +.. +..+.+++.+.+.+..... ..+..  ....+..+++++++|+++|.+  +.++++++++++.
T Consensus        27 ~~iYLd~as~---g~~-p~~v~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~e~~R~~iA~llga~~~ei~~~~~~T~~~~  101 (404)
T d1qz9a_          27 GVIYLDGNSL---GAR-PVAALARAQAVIAEEWGNG-LIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLF  101 (404)
T ss_dssp             TCEECCTTTS---CCC-BTTHHHHHHHHHHTCCCCC-GGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHH
T ss_pred             CCEEcCCccc---ccC-CHHHHHHHHHHHHHHhccc-CcccccchhHHHHHHHHHHHHHHHhCCCCCcEEEecCchHHHH
Confidence            4456666553   322 4568899988886532111 11111  112467788999999999954  6788888888876


Q ss_pred             HHHHh------hcCCCCEEEEeCcc-cHHHHH----HHHhcCCeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        155 SAIAA------YVKRNDAVFVDENI-NFAIQT----GLIASRCKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       155 ~ai~a------~~~~gd~v~~~~~~-h~~~~~----~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                      .++..      ...+++.|++.... +.....    +.+.....+......+++.+++.+.           +++++|++
T Consensus       102 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----------~~T~lV~i  170 (404)
T d1qz9a_         102 KVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAID-----------QDTAVVML  170 (404)
T ss_dssp             HHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCS-----------TTEEEEEE
T ss_pred             HHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceeccccccchhHHHhcC-----------CCceEEEE
Confidence            65432      23566655554444 433222    2233333333333446777777663           46789999


Q ss_pred             ecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCccccc-Cc--ccEEEec
Q psy15447        224 EGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALG-SV--GGFCVGS  300 (457)
Q Consensus       224 e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg-~~--gG~v~~~  300 (457)
                      .++++.+|.+.|+++|.++|+++|+++++|.+|+.|...         ..+...++|+++.|.+|.++ ++  +|++..+
T Consensus       171 ~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~g~~~---------~~~~~~~~d~~~~s~~K~~~~~~g~~g~~~~~  241 (404)
T d1qz9a_         171 THVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVP---------VDLHQAGADYAIGCTYKYLNGGPGSQAFVWVS  241 (404)
T ss_dssp             ESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CCHHHHTCSEEEECSSSTTCCCTTCCCEEEEC
T ss_pred             ecccccccceecHHHHhccccccccceeEEeeccccccc---------cccccccceEEEEechhhcccCCceEEEEEec
Confidence            999999999999999999999999999999999987542         12222345888999999883 33  3677777


Q ss_pred             HHHHHHHHhhCCc---------------------ceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhh
Q psy15447        301 SYIIEHHRLSGSG---------------------YCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLS  357 (457)
Q Consensus       301 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~  357 (457)
                      +...+.+......                     ....++.+........++++.+.+.  ....++...+...+...+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~  321 (404)
T d1qz9a_         242 PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVE  321 (404)
T ss_dssp             TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHH
Confidence            6655443211000                     0012234555556666666666543  2334444444444444333


Q ss_pred             cccccCCeEEeccCC----CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe-cCCC
Q psy15447        358 QHKVTQRFLVQGHRD----TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC-NISH  432 (457)
Q Consensus       358 ~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~-~~~~  432 (457)
                      .+...+++.+.++..    ++++.+.+.+          ..++.+.|.++||.+...         .++.|||++ +.++
T Consensus       322 ~~~~~~~~~i~~p~~~~~r~~~vsf~~~~----------~~~v~~~L~~~gi~~~~r---------~~~~lRiS~~h~yn  382 (404)
T d1qz9a_         322 QRCAAHELTLVTPREHAKRGSHVSFEHPE----------GYAVIQALIDRGVIGDYR---------EPRIMRFGFTPLYT  382 (404)
T ss_dssp             HHHTTSCCEECSCSSGGGBCSEEEEECTT----------HHHHHHHHHTTTEECEEE---------TTTEEEEECCTTTC
T ss_pred             hhccCCCEEEECCCCccceeeEEEEecCC----------HHHHHHHHHHCCCEEeec---------CCCeEEEECCCCCC
Confidence            322257888765422    5677666543          346889999999976421         136899999 5689


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~  450 (457)
                      |++|||+++++|++++++
T Consensus       383 t~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         383 TFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            999999999999999875

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.86  E-value=2.6e-20  Score=179.26  Aligned_cols=293  Identities=13%  Similarity=0.132  Sum_probs=188.5

Q ss_pred             hHHHHHHHHHHHhhcCCCc----EEEecccHHHHHHHHHhhcCCCCEE-EEeCcccHHHHH-HHHhcCCeEEEec--CC-
Q psy15447        124 NVVHLDLENDIASFMGLEE----TALYSFGFSTSASAIAAYVKRNDAV-FVDENINFAIQT-GLIASRCKVQYFK--HN-  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~----~i~~~sG~~a~~~ai~a~~~~gd~v-~~~~~~h~~~~~-~~~~~g~~~~~~~--~~-  194 (457)
                      .+..++.++.+++++|.+.    .++.+||+.++..++..+..+++.+ +.....+..... .....+.......  .. 
T Consensus        32 ~~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (361)
T d1m32a_          32 IGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVA  111 (361)
T ss_dssp             TTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhhhhccccceeeehhhhhhHHHHhhhhhcccccccccccC
Confidence            4567889999999999752    3444678899999998887776644 444444443322 2233333333222  11 


Q ss_pred             -CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        195 -NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       195 -d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                       .....+.......        .+++++.+.++.+.+|.+.|+++|.++|++||+++++|.+|+.|...         ++
T Consensus       112 ~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~qs~G~~~---------~d  174 (361)
T d1m32a_         112 RPDVQAIDAILNAD--------PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIP---------MD  174 (361)
T ss_dssp             CCCHHHHHHHHHHC--------TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSC---------CC
T ss_pred             CccchhhHHHHHhc--------cCccceEEEeeecccccchhhhhhhhhhcccceeeEeecccccCccc---------cc
Confidence             1122222222222        46788999999999999999999999999999999999999987542         34


Q ss_pred             CCCCCccEEEecCccccc-Ccc-cEEEecHHHHHHHHhhCCc----------------ceecCCCcHHHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALG-SVG-GFCVGSSYIIEHHRLSGSG----------------YCFSASLPPFLAVAANKALHLL  335 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg-~~g-G~v~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~aaa~a~l~~~  335 (457)
                      +...++|++++|.+|+++ +.| |++..+++..+.......+                ..+..+.+.....+...++..+
T Consensus       175 ~~~~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~  254 (361)
T d1m32a_         175 IAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKEL  254 (361)
T ss_dssp             TTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH
T ss_pred             ccccccceEEeeecccccCCCCceEEEechhhhhhhccccccccccchhhhccccccccccCCCCCchhhhHHHHHHHHH
Confidence            444567999999999995 445 7788887665443211110                0112233444555555555444


Q ss_pred             hhC---cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEec
Q psy15447        336 KAN---PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITC  409 (457)
Q Consensus       336 ~~~---~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~  409 (457)
                      ..+   +...++.+++.+.+.+.++.    .|.....++  . ..++.+.++.....     ...++.+.|.++||.+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~~~~~rs~~v~~~~~p~~~~~-----~~~~~~~~l~~~gi~i~~  325 (361)
T d1m32a_         255 AKEGGVAARHQRYQQNQRSLVAGMRA----LGFNTLLDDELHSPIITAFYSPEDPQY-----RFSEFYRRLKEQGFVIYP  325 (361)
T ss_dssp             HHHTHHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCGGGBCSSEEEEECCCCTTC-----CHHHHHHHHHHTTEECEE
T ss_pred             HHhcchhhhHHHHHHHHHHHHHHHhh----cCCcccCChhhcCCcEEEEECCCCCCC-----CHHHHHHHHHHCCcEEEC
Confidence            332   23445666777788888777    454433221  2 33455655433211     356789999999999876


Q ss_pred             cccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        410 PSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       410 ~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                      +..      ...+.+||+....+|++||++++++|++++
T Consensus       326 G~~------~~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         326 GKV------SQSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             CCC------SSSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             CCc------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            542      335789999655689999999999999874

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.86  E-value=1.2e-21  Score=184.81  Aligned_cols=324  Identities=14%  Similarity=0.066  Sum_probs=192.0

Q ss_pred             EeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCC--cEEEecccHHHHHHHHHhhc
Q psy15447         84 NFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLE--ETALYSFGFSTSASAIAAYV  161 (457)
Q Consensus        84 d~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~ai~a~~  161 (457)
                      +|.+ +|.. +.||++.+|+.++....+.+       ||..+..+++++++++++|.+  .++++++|++||..++..+.
T Consensus         3 ~f~n-d~~~-g~~P~v~eAl~~~~~~~~~~-------y~~~~~~~~lr~~ia~~~g~~~~~v~~tsggtean~~a~~~~~   73 (340)
T d1svva_           3 SFVN-DYSV-GMHPKILDLMARDNMTQHAG-------YGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLAL   73 (340)
T ss_dssp             ECSC-SCSS-CCCHHHHHHHHHHTTCCCCS-------TTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHC
T ss_pred             Cccc-CCCC-CCCHHHHHHHHHHhhcCCCC-------CCCCHHHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHHh
Confidence            5643 4433 45999999999876653322       456778889999999999965  56778899999999999999


Q ss_pred             CCCCEEEEeCcccHHHHHHH--HhcCCe-EEEecCC---CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCC
Q psy15447        162 KRNDAVFVDENINFAIQTGL--IASRCK-VQYFKHN---NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICP  235 (457)
Q Consensus       162 ~~gd~v~~~~~~h~~~~~~~--~~~g~~-~~~~~~~---d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~  235 (457)
                      .+++.++.....|.+.....  ...+.. ....+..   +.+...+........     ......+++....++.|.+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  148 (340)
T d1svva_          74 RPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE-----HMVIPKLVYISNTTEVGTQYT  148 (340)
T ss_dssp             CTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST-----TSCEEEEEEEESSCTTSCCCC
T ss_pred             hhccccccccccceeeeecccccccceeeeecccccccccchhHHHHhhhhhcc-----cCCcceeeeeccccccccccc
Confidence            99999999888877754321  122222 2222211   233333333322110     122333444444445566655


Q ss_pred             ---hHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc-cEEEecHHHHHHHHhhC
Q psy15447        236 ---LKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG-GFCVGSSYIIEHHRLSG  311 (457)
Q Consensus       236 ---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g-G~v~~~~~~~~~~~~~~  311 (457)
                         +..+.++|+++|.++++|+++..+.....+.........  ...++...+..|..+..+ ++...............
T Consensus       149 ~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (340)
T d1svva_         149 KQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIA--RLTDMFYIGATKAGGMFGEALIILNDALKPNARHLI  226 (340)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHH--HHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHHH
T ss_pred             HHHhhhhhcccccccceeeeeccceeeeeccccccccccccc--ccceeeecCCccccccccccccccchhhhhhhhhhc
Confidence               567789999999999999998765544332222111111  112355555555554333 33344333333222211


Q ss_pred             CcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcchHHH
Q psy15447        312 SGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVAS  389 (457)
Q Consensus       312 ~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  389 (457)
                      .....+.+......+++.+.   ++..  ....++..++..++...|+.    .|+++..++.++++++.++.       
T Consensus       227 ~~~~~~~~~~~~~~aa~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~p~~~~~v~~~~~~-------  292 (340)
T d1svva_         227 KQRGALMAKGWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEA----CGIRLAWPSASNQLFPILEN-------  292 (340)
T ss_dssp             HHTTCCCTTTHHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCCSSSEECBEEEH-------
T ss_pred             ccccCccchhhHHHHHHHHH---hhhhHHHHHHHHHHHHHhhhHHHHhc----CCCeeecCCCceEEEEeCCH-------
Confidence            11111222233333333222   3222  34566777888889999988    78887767778877766543       


Q ss_pred             HHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHH
Q psy15447        390 KKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKS  447 (457)
Q Consensus       390 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~  447 (457)
                           ...+.|.+++........     ..+.+.+||+++..+|++|||+++++|+++
T Consensus       293 -----~~~~~l~~~~~~~~~~~~-----~~~~~~vR~s~~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         293 -----TMIAELNNDFDMYTVEPL-----KDGTCIMRLCTSWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             -----HHHHHHTTTEECEEEEEE-----TTTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred             -----HHHHHHHHhhhhhccccc-----CCCCcEEEEECCCCCCHHHHHHHHHHHhcC
Confidence                 244556666543221111     233578999999999999999999999863

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.86  E-value=1.1e-19  Score=175.85  Aligned_cols=291  Identities=13%  Similarity=0.124  Sum_probs=195.4

Q ss_pred             hHHHHHHHHHHHhhcCCC--cEEEe-cccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH--HHHhcCCeEEEec--CC--
Q psy15447        124 NVVHLDLENDIASFMGLE--ETALY-SFGFSTSASAIAAYVKRNDAVFVDENINFAIQT--GLIASRCKVQYFK--HN--  194 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~--~~i~~-~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~--~~--  194 (457)
                      .+...++++.|+++++.+  ..+++ ++|+.++.+++..+..+++.+++....|.+...  .....+.....+.  ..  
T Consensus        50 ~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (377)
T d1vjoa_          50 LALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKPWGEV  129 (377)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhccccccccceeeechhhhhhhhhhhhhcccccccccCCCCc
Confidence            578889999999999864  35555 567899999999999999988887777665332  2333343333322  22  


Q ss_pred             -CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        195 -NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       195 -d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                       +.+..+.....          ..+.++.+....+.+|.+.|+++|.++|+++|+++++|.++++|.+.         ..
T Consensus       130 ~~~~~~~~~~~~----------~~~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~g~~~---------~~  190 (377)
T d1vjoa_         130 FSLEELRTALET----------HRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVP---------IF  190 (377)
T ss_dssp             CCHHHHHHHHHH----------HCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSC---------CC
T ss_pred             ccchhhhhhhhc----------CcceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhhhhhh---------hc
Confidence             34444444333          34567778888889999999999999999999999999999887542         33


Q ss_pred             CCCCCccEEEecCcccccC-c-ccEEEecHHHHHHHHhhCCc------------------ceecCCCcHHHHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGS-V-GGFCVGSSYIIEHHRLSGSG------------------YCFSASLPPFLAVAANKALH  333 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~-~-gG~v~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~aaa~a~l~  333 (457)
                      ++..++|+++.+.+|++++ . +|++..++..++.......+                  ..+.+..+...+.+..++..
T Consensus       191 ~~~~~~d~~~~s~~K~~~gp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  270 (377)
T d1vjoa_         191 LDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALR  270 (377)
T ss_dssp             TTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred             ccccccceeeecccccccCCCEEEEecchhhHHhhhhccCCCCcceeeccchhhhccCcccccccccceechhhhHHHHh
Confidence            4445668999999999854 3 36677788777765332211                  11122233334344444544


Q ss_pred             HHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEeccC--C-CCeEEEEecCCcchHHHHHHHHHHHHHHHHc-CeeE
Q psy15447        334 LLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHR--D-TPLKYLYLQKSDDEVASKKLLQTICDMCIQA-GFAI  407 (457)
Q Consensus       334 ~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v  407 (457)
                      .+.+.  +...++.+++..++.+.+.+    .+.....+.  . ..++.+.+++..       ...++++.|.++ ||.+
T Consensus       271 ~~~~~g~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~~~rs~~v~~~~~p~~~-------~~~~l~~~L~~~~gI~v  339 (377)
T d1vjoa_         271 LIAQEGLANCWQRHQKNVEYLWERLED----IGLSLHVEKEYRLPTLTTVCIPDGV-------DGKAVARRLLNEHNIEV  339 (377)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCBSSCGGGBCSSEEEEECCTTC-------CHHHHHHHHHHHHCEEC
T ss_pred             hhhhcCchHHHHHHHHHhhhhhhhhhc----cCceeecChHhcCCeEEEEECCCCC-------CHHHHHHHHHhcCCEEE
Confidence            44332  45667777888889888877    454443221  2 335556665544       456788888655 9988


Q ss_pred             eccccCccccCCCCCeEEEEe-cCCCCHHHHHHHHHHHHHHHH
Q psy15447        408 TCPSHLDQEAKKQKPSIRITC-NISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       408 ~~~~~~~~~~~~~~~~lRi~~-~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..+..+     ..++.+||++ +...|+||||+++++|+++++
T Consensus       340 ~~G~~~-----~~~~~~Ris~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         340 GGGLGE-----LAGKVWRVGLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             EECCGG-----GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             ecCccc-----ccCCEEEEecCcCCCCHHHHHHHHHHHHHHhC
Confidence            765432     2357899994 667789999999999999863

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.86  E-value=6.2e-20  Score=172.87  Aligned_cols=338  Identities=13%  Similarity=0.108  Sum_probs=227.9

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHH----HHHHhhcCCCcE-EEecccHHH
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLE----NDIASFMGLEET-ALYSFGFST  152 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~~~-i~~~sG~~a  152 (457)
                      +..|++. |-|+    -+|.+.++....+ .+|..++.+-|.+.| .+...++|    ++..++|+.+.+ +-..||+.|
T Consensus        23 ~~~l~LiaSEN~----~S~~v~~a~~S~l~nkyaeG~pg~ryy~G-~~~id~iE~la~~ra~~lF~a~~anVqp~SGs~A   97 (405)
T d1kl1a_          23 HAKIELIASENF----VSRAVMEAQGSVLTNKYAEGYPGRRYYGG-CEYVDIVEELARERAKQLFGAEHANVQPHSGAQA   97 (405)
T ss_dssp             HHSEECCTTCCC----CCHHHHHHHTSGGGGCCCCEETTEESSSC-CHHHHHHHHHHHHHHHHHHCCSEEECCCSSHHHH
T ss_pred             HcCceEeccCCc----CCHHHHHHhcCcccCcCcCCCCCccccCC-chhHHHHHHHHHHHHHHHhCCCcceeeccCchHH
Confidence            4556664 3343    2588888887777 567766666666544 44444444    444568898866 556799999


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHH---H--HHhcCCeEEEecC------CCHHHHHHHHHhhchhcccCCCCccEEE
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQT---G--LIASRCKVQYFKH------NNMQHLEELLRQQDERDTLNSKVTKKFI  221 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~---~--~~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~~~~~~~~~v  221 (457)
                      |.+++.++++|||.|+.-...++....   .  ......+.+.++.      -|.+++++.+++.+          +++|
T Consensus        98 n~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~~~~~ID~d~l~~~a~~~k----------PklI  167 (405)
T d1kl1a_          98 NMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHR----------PKLI  167 (405)
T ss_dssp             HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC----------CSEE
T ss_pred             HHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccchhcccccHHHHHHHHHhhC----------cceE
Confidence            999999999999999987655433221   0  1111234454443      28999999998754          3577


Q ss_pred             EEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cCcccEEEec
Q psy15447        222 IVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GSVGGFCVGS  300 (457)
Q Consensus       222 i~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~~gG~v~~~  300 (457)
                      ++-...  .-...|+++++++|++.|++|++|-+|-.|..-. |  .   +.-+-+..|++++|.+|+| |+.||++.++
T Consensus       168 i~G~S~--y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~-g--~---~~~P~~~aDvvt~tThKtlrGPrgg~I~~~  239 (405)
T d1kl1a_         168 VAAASA--YPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAA-G--L---HPNPVPYAHFVTTTTHKTLRGPRGGMILCQ  239 (405)
T ss_dssp             EECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT-T--S---SCCSTTTCSEEEEESSSTTCCCSCEEEEEC
T ss_pred             Eecccc--cccccChHHHHHHHhhhCCEEecchhhHhhhhhh-h--h---cCChhhhhhheeccccccccCCCCceEEec
Confidence            664322  2335679999999999999999999997665421 1  1   1111134699999999999 6789999999


Q ss_pred             HHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-CCCCeEEE
Q psy15447        301 SYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-RDTPLKYL  378 (457)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~i  378 (457)
                      +++.+.+.....+...++......++.+.+-.+.+. +..+..+++.+|++.|.+.|.+    .|+.+... ..++++++
T Consensus       240 ~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~----~G~~vv~ggTd~H~vlv  315 (405)
T d1kl1a_         240 EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQN----EGFTLVSGGTDNHLLLV  315 (405)
T ss_dssp             HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH----TTCEEGGGSCSSSEEEE
T ss_pred             chhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc----CCceeecCCCccceeec
Confidence            998888876655555554434444444433333332 2246788999999999999999    89998743 56788888


Q ss_pred             EecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc-ccCCCCCeEEEEec----CCCCHHHHHHHHHHHHHHHHH
Q psy15447        379 YLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ-EAKKQKPSIRITCN----ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       379 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~~~~~~~~lRi~~~----~~~t~edi~~~~~~l~~~~~~  450 (457)
                      .+....-      ......+.|.+.||.+.....|.. ..+...+.+||..+    ....++|++++.+.|.++++.
T Consensus       316 dl~~~~~------~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~dm~~ia~~I~~~l~~  386 (405)
T d1kl1a_         316 DLRPQQL------TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKN  386 (405)
T ss_dssp             ECGGGTC------CHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred             cccccCC------cHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence            8754210      233444556677999876555433 22333578999875    446889999999999988753

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.5e-19  Score=171.50  Aligned_cols=212  Identities=17%  Similarity=0.205  Sum_probs=172.0

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~  198 (457)
                      .++....||+.|+++-|.+.++.++||..|+..++.+++++||.|++....|+.+..-+.    -.|.++..++..|.++
T Consensus        56 ~nPt~~~le~~la~LEg~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~~d~~~  135 (391)
T d1cl1a_          56 GTLTHFSLQQAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGAD  135 (391)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGG
T ss_pred             CChhHHHHHHHHHHHhCCccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccccCccccc
Confidence            578899999999999999999999999999999999999999999999999988776543    3477888888888888


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCCCccccccCCCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g~~~~~~~~~~~  276 (457)
                      +++.++           +++++|++|++.||+..+.++++++++|+++  |+++++|..++.+..-+         .+ .
T Consensus       136 ~~~~i~-----------~~t~~i~~EtpsNP~l~v~Di~~i~~~a~~~~~g~~~vVDnT~atP~~~~---------Pl-~  194 (391)
T d1cl1a_         136 IVKHLQ-----------PNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFK---------AL-D  194 (391)
T ss_dssp             GGGTCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSC---------GG-G
T ss_pred             cccccc-----------cccceeeecccCcccccccccHHHHHHHHhccCCcEEEEeccccchhhhc---------cc-c
Confidence            876654           4678999999999999999999999999775  99999999875432211         01 1


Q ss_pred             CCccEEEecCcccccC----cccEEEecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Q psy15447        277 EEVDMIIGSLEHALGS----VGGFCVGSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTM  352 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~----~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l  352 (457)
                      .++||++.|++|.+++    .||.++++++..+.+....  ...+..++|..+...+..++-+.   .++++..+++..+
T Consensus       195 ~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~--~~~G~~~~p~~a~ll~rgl~TL~---lR~~~~~~nA~~v  269 (391)
T d1cl1a_         195 FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA--YLMGQMVDADTAYITSRGLRTLG---VRLRQHHESSLKV  269 (391)
T ss_dssp             GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH--HHTTCCCCHHHHHHHHHHHTTHH---HHHHHHHHHHHHH
T ss_pred             cccceEEeecchhccccccccccceeccccccccchhhh--hcccccCCchhhhhhhccchhHH---HHHHHHHHHHHHH
Confidence            2458999999999964    4688888887777665432  33556679988888877766553   4788999999999


Q ss_pred             HHHhhccc
Q psy15447        353 HSLLSQHK  360 (457)
Q Consensus       353 ~~~L~~~~  360 (457)
                      .+.|++++
T Consensus       270 A~~L~~hp  277 (391)
T d1cl1a_         270 AEWLAEHP  277 (391)
T ss_dssp             HHHHHTCT
T ss_pred             HHHHHhcc
Confidence            99999843

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=7e-20  Score=181.46  Aligned_cols=313  Identities=11%  Similarity=0.086  Sum_probs=194.9

Q ss_pred             HHHHHHHHHHhhcCCC---cEEEecccHHHHH-HHHHh---hcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecC-----
Q psy15447        126 VHLDLENDIASFMGLE---ETALYSFGFSTSA-SAIAA---YVKRNDAVFVDENINFAIQTGLIASRCKVQYFKH-----  193 (457)
Q Consensus       126 ~~~~l~~~la~~~g~~---~~i~~~sG~~a~~-~ai~a---~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~-----  193 (457)
                      ...++.+.+++++|.+   ..+++++|++++. .++.+   ...+++.|+++...|.+...++...|.+.+.++.     
T Consensus        95 le~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~~~~  174 (445)
T d3bc8a1          95 ITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGD  174 (445)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETT
T ss_pred             HHHHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeeccCc
Confidence            3344556677777854   4566777775433 33333   3456789999999999999999999988776642     


Q ss_pred             ---CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcccc
Q psy15447        194 ---NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTE  270 (457)
Q Consensus       194 ---~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~  270 (457)
                         .|+++|++.+++...       +++++|++..+++++|.+.|+++|.++|++||+++|+|++++.+..+.....   
T Consensus       175 ~~~id~~~l~~~i~~~~~-------~~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~---  244 (445)
T d3bc8a1         175 ELRTDLKAVEAKIQELGP-------EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLI---  244 (445)
T ss_dssp             EEECCHHHHHHHHHHHCG-------GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHH---
T ss_pred             ccccCHHHHHHHHHhccc-------cCeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccchhhhhhccccc---
Confidence               389999999987653       4678888999998999999999999999999999999999986543210000   


Q ss_pred             ccCCCCCCccEEEecCcccccC-c-ccEEEe-cHHHHHHHHhhCCcceecCCC-cHHHHHHHHHHHHHHhhCcHHHHHHH
Q psy15447        271 YFGVSTEEVDMIIGSLEHALGS-V-GGFCVG-SSYIIEHHRLSGSGYCFSASL-PPFLAVAANKALHLLKANPSLLTKLR  346 (457)
Q Consensus       271 ~~~~~~~~~Di~~~s~sK~lg~-~-gG~v~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~aaa~a~l~~~~~~~~~~~~l~  346 (457)
                      .++..-.++|+++.|.+|.+++ . ||+++. ++...+.+.....   ++.+. +.+.+.+.+..+... ......++..
T Consensus       245 ~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~  320 (445)
T d3bc8a1         245 QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYP---GRASASPSLDVLITLLSLGCS-GYRKLLKERK  320 (445)
T ss_dssp             HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSC---SCBCSHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred             hhccCcCCcceEEecCccccccCCCCceeeeCChHHHHHHHHHHh---hcccCcchHHHHHHHHHHhhh-cchhhHHHHH
Confidence            0111112458999999998864 2 345544 4566665543322   22222 333333333222211 1123556666


Q ss_pred             HHHHHHHHHhhcccccCCeEEeccCCC-CeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCcc----------
Q psy15447        347 EKCNTMHSLLSQHKVTQRFLVQGHRDT-PLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQ----------  415 (457)
Q Consensus       347 ~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----------  415 (457)
                      ++.+++.+.|+++....+..+...... ....+.+......  ......++...|.+.||.......+..          
T Consensus       321 ~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~--~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~  398 (445)
T d3bc8a1         321 EMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGH--HDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFR  398 (445)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSS--SSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeecccc--CCCCHHHHHHHHHHcCCCcceeeccccccchhhhhhh
Confidence            777788887766322234433322222 2333333221100  001445677788888874322111110          


Q ss_pred             -----ccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhcCC
Q psy15447        416 -----EAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAVQP  454 (457)
Q Consensus       416 -----~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~~~  454 (457)
                           ......+.+|++++..+|++|||+++++|+++++.+++.
T Consensus       399 ~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~  442 (445)
T d3bc8a1         399 GFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE  442 (445)
T ss_dssp             TTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence                 001123569999999999999999999999999988654

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.85  E-value=3e-20  Score=182.18  Aligned_cols=335  Identities=10%  Similarity=-0.027  Sum_probs=196.1

Q ss_pred             eEEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcE--EEecccHH
Q psy15447         82 CINFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEET--ALYSFGFS  151 (457)
Q Consensus        82 ~id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~--i~~~sG~~  151 (457)
                      .||++-+.|.+-.+.    |.|++|....+.. .....++....|..++.+++++.+.+..+    .+..  +...+++.
T Consensus        32 ~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~-~~~~~~Y~p~~G~p~lreaia~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (412)
T d1ajsa_          32 KVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN-SSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTG  110 (412)
T ss_dssp             CEECCSCCCCCTTSCCCCCHHHHHHHHHHHTC-TTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             cEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhC-CCcCCCCCCCCCCHHHHHHHHHHHhccCCcccccccceeecccchhh
Confidence            478876655443322    4555554433332 21112233345666655555555544433    2332  33344444


Q ss_pred             HHHHHHH-------hhcCCCCEEEEeCcccHHHHHHHHhcCCeEEE-ecC-------CCHHHHHHHHHhhchhcccCCCC
Q psy15447        152 TSASAIA-------AYVKRNDAVFVDENINFAIQTGLIASRCKVQY-FKH-------NNMQHLEELLRQQDERDTLNSKV  216 (457)
Q Consensus       152 a~~~ai~-------a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~-~~~-------~d~~~le~~l~~~~~~~~~~~~~  216 (457)
                      ++..+..       ++..+||.|++..++|..+...+...|.+.+. .+.       .|++.+++.+....        +
T Consensus       111 ~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~--------~  182 (412)
T d1ajsa_         111 ALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAP--------E  182 (412)
T ss_dssp             HHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSC--------T
T ss_pred             HHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEEEeecccccccccccHHHHHHHHHhcc--------C
Confidence            4444332       34689999999999999999999999976443 222       25677766665543        5


Q ss_pred             ccEEEEEecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-ccccccCCCCCCccEEEecCcccccC
Q psy15447        217 TKKFIIVEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GVTEYFGVSTEEVDMIIGSLEHALGS  292 (457)
Q Consensus       217 ~~~~vi~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~~~~~~~~~~~~Di~~~s~sK~lg~  292 (457)
                      +++++++.+++||||.+.+   +++|+++|++||+++|.||+|....++.... ..............+++.|++|.++.
T Consensus       183 ~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~  262 (412)
T d1ajsa_         183 FSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGL  262 (412)
T ss_dssp             TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCC
T ss_pred             CcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhcccccccccccccccC
Confidence            6788999999999999998   7899999999999999999997654432110 00000000011225778899999976


Q ss_pred             cc---cEEEecHHHHHHHHhhC------CcceecCCCcHHHHHHHHHHHH------HH-hhCcHHHHHHHHHHHHHHHHh
Q psy15447        293 VG---GFCVGSSYIIEHHRLSG------SGYCFSASLPPFLAVAANKALH------LL-KANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       293 ~g---G~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aaa~a~l~------~~-~~~~~~~~~l~~~~~~l~~~L  356 (457)
                      .|   |++++.....+......      ....++ +.+....+++.+.+.      .. ++...++++++++++.+.+.|
T Consensus       263 ~G~R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L  341 (412)
T d1ajsa_         263 YNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWS-NPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARL  341 (412)
T ss_dssp             GGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTS-SCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHHHhhcccc-ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            65   88877754433321100      001111 123333333322221      11 112346677888888888888


Q ss_pred             hcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHH
Q psy15447        357 SQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQ  435 (457)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~e  435 (457)
                      +++.....+....+..+.+.++  +...          +.+++|+ ++||++.++             .||+++. .+++
T Consensus       342 ~~~~~~~~~~~i~~~~G~F~~~--~ls~----------~~v~~L~~e~gV~~vpg-------------~Ri~~ag-~~~~  395 (412)
T d1ajsa_         342 EALKTPGTWNHITDQIGMFSFT--GLNP----------KQVEYLINQKHIYLLPS-------------GRINMCG-LTTK  395 (412)
T ss_dssp             HHTTCSSCCHHHHHCCSSEEEC--CCCH----------HHHHHHHHTTCEECCTT-------------SEEEGGG-CCTT
T ss_pred             HHhCCCCCeeeecCCCeEEEec--CCCH----------HHHHHHHHhCCEEEeCC-------------CeEEecc-CCHH
Confidence            8732111123233445555443  2221          3345554 569987653             2888753 5788


Q ss_pred             HHHHHHHHHHHHHHHhc
Q psy15447        436 DMNSLIETLCKSHDIAV  452 (457)
Q Consensus       436 di~~~~~~l~~~~~~~~  452 (457)
                      +|++++++|++++++++
T Consensus       396 ~i~~~a~aI~~av~~~~  412 (412)
T d1ajsa_         396 NLDYVATSIHEAVTKIQ  412 (412)
T ss_dssp             THHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHhcC
Confidence            99999999999998763

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.85  E-value=4.7e-19  Score=171.38  Aligned_cols=320  Identities=13%  Similarity=0.162  Sum_probs=210.6

Q ss_pred             HHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhh-cCCCCEEEEeCcccHHHH
Q psy15447        100 EKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAY-VKRNDAVFVDENINFAIQ  178 (457)
Q Consensus       100 ~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~-~~~gd~v~~~~~~h~~~~  178 (457)
                      ++++.+.++.-..+        +..+...++|+++++++|.+.+++++||+.|+..|+.++ .++||.|+++..+|.++.
T Consensus         4 ~~~~~~~l~~~~~~--------~~G~~~~~fE~~~~~~~~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a~~   75 (374)
T d1o69a_           4 LKYIEEVFKSNYIA--------PLGEFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASV   75 (374)
T ss_dssp             HHHHHHHHHHTTTS--------CTTHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGT
T ss_pred             HHHHHHHHhcCCcC--------CCCHHHHHHHHHHHHHHCcCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHhhH
Confidence            47778888762211        124668999999999999999999999999999999987 789999999999999999


Q ss_pred             HHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEE
Q psy15447        179 TGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVD  253 (457)
Q Consensus       179 ~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~D  253 (457)
                      .++...|.+++.++.+     .....+.......        .+++++++.+.+   |..+++++|.++|+++|+.||.|
T Consensus        76 ~~~~~~g~~pv~~Di~~~~~~~~~~~~~~~~~~~--------~~~~aii~~~~~---G~~~d~~~i~~~~~~~~i~vIED  144 (374)
T d1o69a_          76 APICYLKAKPVFIDCDETYNIDVDLLKLAIKECE--------KKPKALILTHLY---GNAAKMDEIVEICKENDIVLIED  144 (374)
T ss_dssp             HHHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCS--------SCCCEEEEECGG---GCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHhhccceeEecccccccccccccccccchhcc--------cccccccccccc---cchhhhHHHHHHhhccCcchhhh
Confidence            9999999999888654     1223333333322        455677776655   77889999999999999999999


Q ss_pred             cCcccccccCCCCccccccCCCCCCccEEEecCc--ccccC-cccEEE-ecHHHHHHHHhhC---Cc---------ceec
Q psy15447        254 ESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLE--HALGS-VGGFCV-GSSYIIEHHRLSG---SG---------YCFS  317 (457)
Q Consensus       254 Ea~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~s--K~lg~-~gG~v~-~~~~~~~~~~~~~---~~---------~~~~  317 (457)
                      .+|++|..- .|... ..+|      |+.+.||+  |.++. .||+++ .++++++.++...   ..         ..+.
T Consensus       145 ~a~a~g~~~-~~~~~-G~~g------d~~~fSf~~~K~l~tgeGG~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N  216 (374)
T d1o69a_         145 AAEALGSFY-KNKAL-GTFG------EFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYN  216 (374)
T ss_dssp             CTTCTTCEE-TTEET-TSSS------SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred             hhhhhcceE-CCeec-CCCC------ceEEEeccCccccccccceeehhhhHHHHHhhccccccccccccccccccCCcc
Confidence            999987532 12211 1122      67788885  88853 445554 4577777764321   11         1122


Q ss_pred             CCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcch-----------
Q psy15447        318 ASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDE-----------  386 (457)
Q Consensus       318 ~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------  386 (457)
                      ..++.+.+|.++..|+.+.+   ..++-+++.+++.+.|.+........-..........+.+..+...           
T Consensus       217 ~rm~ei~Aaig~~qL~~l~~---~i~~r~~i~~~y~~~L~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (374)
T d1o69a_         217 YRLSNVLGAIGVAQMEVLEQ---RVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINIS  293 (374)
T ss_dssp             CBCCHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECC
T ss_pred             ccccchhhhhhHHHHhhhhh---hcchhHHHHHHHHhhccccccccccccCCCCChhheeeeeccccccccccccccccc
Confidence            34799998988888776654   5566667788888888762111000000001122222222211000           


Q ss_pred             ---HHHHHHHHHHHHHHHHcCeeEeccccCccccC----------C-----CCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        387 ---VASKKLLQTICDMCIQAGFAITCPSHLDQEAK----------K-----QKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       387 ---~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~----------~-----~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                         .........+.+.|.++||.+++...|....+          +     ....+.+.++..+|++|++++++.|.+++
T Consensus       294 ~~~~~~~~~r~~l~~~L~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~l  373 (374)
T d1o69a_         294 QKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSI  373 (374)
T ss_dssp             CCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             hhhccchhhHHHHHHHHHHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHHHHHHHHHHHH
Confidence               00001455789999999998876543322100          0     02347777778889999999999999876


Q ss_pred             H
Q psy15447        449 D  449 (457)
Q Consensus       449 ~  449 (457)
                      +
T Consensus       374 k  374 (374)
T d1o69a_         374 K  374 (374)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2e-20  Score=182.55  Aligned_cols=327  Identities=11%  Similarity=0.020  Sum_probs=201.3

Q ss_pred             eEEeecCCccCCC----CChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC----CcE--EEecccHH
Q psy15447         82 CINFATHNYLSFV----ENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL----EET--ALYSFGFS  151 (457)
Q Consensus        82 ~id~~s~~~l~~~----~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~--i~~~sG~~  151 (457)
                      .||++-+.|.+-.    ..|.|++|..+.+++-...  ++....|..++++.+++.+.+..+.    +..  +.+++|+.
T Consensus        28 kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~--~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (396)
T d2q7wa1          28 KINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTK--NYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTG  105 (396)
T ss_dssp             CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCC--CCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHH
T ss_pred             cEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCC--CCCCCcCCHHHHHHHHHHHHhhcCCcccccceeeeccchHHH
Confidence            4798866443322    2367888887777663221  2333456666666666665554441    222  23344443


Q ss_pred             H--HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        152 T--SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       152 a--~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      +  +..++.+...+||.|+++.+++..+...++..|.+++.++..       +...+++...+..        .++++++
T Consensus       106 ~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~  177 (396)
T d2q7wa1         106 ALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQ--------AGDVVLF  177 (396)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCC--------TTCEEEE
T ss_pred             HHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEecccccccccccccchHHHHHHHhc--------cCcEEEE
Confidence            3  334445567999999999999999999999999998877642       4555555554433        5677899


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-ccc-ccCCCCCCccEEEecCcccccCcc---
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTE-YFGVSTEEVDMIIGSLEHALGSVG---  294 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~-~~~~~~~~~Di~~~s~sK~lg~~g---  294 (457)
                      +.+++||||.+.+   +++|.++|++|++++|.||+|+...++..... ... ..+.  ....+++.|++|.++..|   
T Consensus       178 ~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~--~~~~~~~~s~sk~~~~~G~R~  255 (396)
T d2q7wa1         178 HGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAM--HKELIVASSYSKNFGLYNERV  255 (396)
T ss_dssp             ECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHH--CSCEEEEEECTTTTTCGGGCC
T ss_pred             ecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhh--cccccccccccccccccCCCc
Confidence            9999999999998   67999999999999999999986555421111 111 0111  112467789999997655   


Q ss_pred             cEEEecHHHHHHHHhhC------CcceecCCCcHHHHHHHHHHHH-------HHhhCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447        295 GFCVGSSYIIEHHRLSG------SGYCFSASLPPFLAVAANKALH-------LLKANPSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       295 G~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aaa~a~l~-------~~~~~~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      ||++++...++......      ....++. .+...+.++.+.+.       ..+..++++++++++++.+.+.|+++..
T Consensus       256 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~  334 (396)
T d2q7wa1         256 GACTLVAADSETVDRAFSQMKAAIRANYSN-PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA  334 (396)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHHHHTTTSS-CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTC
T ss_pred             cccccchhHHHHHHHhhhhhhhhhhccccC-CCHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99988766555442211      0111222 23333333322221       1111234566788888899999988321


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      ...+.+..+++|.+.|+.+.  .          +.+++|+ ++||++.++           +  ||+++. .++++|+++
T Consensus       335 ~~~~~~~~~~~G~F~~~~l~--~----------e~~~~L~~e~gV~~~~g-----------~--Ri~~a~-l~~~~i~~~  388 (396)
T d2q7wa1         335 NRDFSFIIKQNGMFSFSGLT--K----------EQVLRLREEFGVYAVAS-----------G--RVNVAG-MTPDNMAPL  388 (396)
T ss_dssp             CSCCTHHHHCCSSEEECCCC--H----------HHHHHHHHHHCEECCTT-----------C--EEEGGG-CCTTTHHHH
T ss_pred             CCCcceecCCCeEEEeeCCC--H----------HHHHHHHHhCCEEECCC-----------C--EEEecC-CCHHHHHHH
Confidence            11233333456666665332  1          3456665 469987642           1  888753 678899999


Q ss_pred             HHHHHHH
Q psy15447        441 IETLCKS  447 (457)
Q Consensus       441 ~~~l~~~  447 (457)
                      +++|+++
T Consensus       389 ~~ai~~v  395 (396)
T d2q7wa1         389 CEAIVAV  395 (396)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999876

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=1e-19  Score=176.53  Aligned_cols=292  Identities=15%  Similarity=0.135  Sum_probs=197.2

Q ss_pred             HHHHHHHHHHHhhcCC------CcEEEecccHHHHHHHHHhhc---CCCCEEEEeCcccHHHH--HHHHhcCCeEEEecC
Q psy15447        125 VVHLDLENDIASFMGL------EETALYSFGFSTSASAIAAYV---KRNDAVFVDENINFAIQ--TGLIASRCKVQYFKH  193 (457)
Q Consensus       125 ~~~~~l~~~la~~~g~------~~~i~~~sG~~a~~~ai~a~~---~~gd~v~~~~~~h~~~~--~~~~~~g~~~~~~~~  193 (457)
                      +...++.+.+.++++.      +..+|++||++++..++..+.   ++||.|++....|.+..  ......+........
T Consensus        36 ~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (382)
T d2bkwa1          36 SIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRP  115 (382)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCCceEEEEechhhhhhhhhccccccccccccc
Confidence            4455566666666652      234666789999999998875   57888877666554432  223445555543322


Q ss_pred             ------CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHc--CcEEEEEcCcccccccCCC
Q psy15447        194 ------NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKY--QARIFVDESVSFGTLGSTG  265 (457)
Q Consensus       194 ------~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~--g~~li~DEa~~~g~~g~~g  265 (457)
                            .+.+.+++.+..          .+++++.+.++.+.+|...|++++.++|+++  ++++++|.++++|...   
T Consensus       116 ~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~vDa~qs~g~~p---  182 (382)
T d2bkwa1         116 LKIGESVPLELITEKLSQ----------NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE---  182 (382)
T ss_dssp             SSTTSCCCHHHHHHHHHH----------SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSC---
T ss_pred             cCCCCccchhHHHHHhhh----------ccchheeeeeccccccccccchhhhhhccccccceeeeeeccccccccc---
Confidence                  256777777765          3456888888888999999999999999877  5999999999987542   


Q ss_pred             CccccccCCCCCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhhC-------------------------CcceecC
Q psy15447        266 HGVTEYFGVSTEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLSG-------------------------SGYCFSA  318 (457)
Q Consensus       266 ~~~~~~~~~~~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~~-------------------------~~~~~~~  318 (457)
                            .+++..++|+++.|.+|++ |++| |+++.+++..+......                         .+. +..
T Consensus       183 ------id~~~~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  255 (382)
T d2bkwa1         183 ------FEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGA-YFA  255 (382)
T ss_dssp             ------CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCC-CSS
T ss_pred             ------ccccccCeeEEeecccccCcCCCchhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhhhcccccccc-ccc
Confidence                  3444457899999999999 5556 88899988776542110                         011 122


Q ss_pred             CCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc--C---CCCeEEEEecCCcchHHHHH
Q psy15447        319 SLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH--R---DTPLKYLYLQKSDDEVASKK  391 (457)
Q Consensus       319 ~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~--~---~~~~~~i~~~~~~~~~~~~~  391 (457)
                      +++....++..++|+.+.++  +...++.+++.+++++.+.+   ..++.....  .   ...++.+.+.+         
T Consensus       256 Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~---~~~~~~~~~~~~~~~s~~v~~~~~~~---------  323 (382)
T d2bkwa1         256 TPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVN---GLQLTSVSRYPSNMSAHGLTAVYVAD---------  323 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHT---TTCCEESSCSSSTTBCSSCEEEECSC---------
T ss_pred             CCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhh---cccccccccCchhccCCcEEEEcCCC---------
Confidence            45666667777888877553  34566777888889888876   334333211  1   12334455443         


Q ss_pred             HHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEE-ecCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        392 LLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRIT-CNISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       392 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~-~~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                       ..++.+.|.++||.+..+..+    ......+||+ +....+++|+++++++|+.+...++.
T Consensus       324 -~~~~~~~L~~~gi~i~~G~~~----~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~  381 (382)
T d2bkwa1         324 -PPDVIAFLKSHGVVIAGGIHK----DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR  381 (382)
T ss_dssp             -HHHHHHHHHHTTEECBCCCCT----TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             -HHHHHHHHHHCCeEEECCCCh----hhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHHHCc
Confidence             236778888999998876432    1234689999 66667788999999999887776654

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=4.4e-19  Score=170.59  Aligned_cols=248  Identities=15%  Similarity=0.120  Sum_probs=179.5

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHH----HHhcCCeEEEecCCCH-H
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTG----LIASRCKVQYFKHNNM-Q  197 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~----~~~~g~~~~~~~~~d~-~  197 (457)
                      .++....||++|+++-|.+.++.++||..|+.+++.+++++||+|++....|+.+..-    +...|..+..++..+. +
T Consensus        56 ~nPT~~~LE~~la~LE~~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~~~~~~  135 (421)
T d2ctza1          56 MNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPE  135 (421)
T ss_dssp             BCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHH
T ss_pred             CCHHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceecccccCcc
Confidence            4688999999999999999999999999999999999999999999999988876653    4456788888876554 4


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCccc-ccccCCCCccccccCCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSF-GTLGSTGHGVTEYFGVST  276 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~-g~~g~~g~~~~~~~~~~~  276 (457)
                      ..++.++           +++++|++|++.||+..+.++++|+++|+++|+++|+|..++. ..+-   +      .+. 
T Consensus       136 ~~~~~~~-----------~~t~li~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vvDnT~a~tP~~~---~------Pl~-  194 (421)
T d2ctza1         136 EFLALTD-----------EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL---R------PLA-  194 (421)
T ss_dssp             HHHHHCC-----------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC---C------GGG-
T ss_pred             hhccccC-----------CCceEEEEcCCCcceeEecchHHHHHHHHhcCCceEecccccccceec---c------ccc-
Confidence            4444442           5778999999999999999999999999999999999998652 2110   0      111 


Q ss_pred             CCccEEEecCcccccC----cccEEEecHH-------------------------------HHHHHHhhCCcceecCCCc
Q psy15447        277 EEVDMIIGSLEHALGS----VGGFCVGSSY-------------------------------IIEHHRLSGSGYCFSASLP  321 (457)
Q Consensus       277 ~~~Di~~~s~sK~lg~----~gG~v~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~  321 (457)
                      .++||++.|.+|.+++    .||.++.+++                               .+...+... ...++..++
T Consensus       195 ~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~s  273 (421)
T d2ctza1         195 WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDG-LRDQGQALG  273 (421)
T ss_dssp             GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTH-HHHHCCCCC
T ss_pred             cCCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHH-HHhccCCCC
Confidence            3459999999999964    4688775432                               111111111 112466789


Q ss_pred             HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc---------------CCCCeEEEEecCCcch
Q psy15447        322 PFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---------------RDTPLKYLYLQKSDDE  386 (457)
Q Consensus       322 ~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---------------~~~~~~~i~~~~~~~~  386 (457)
                      |..|..++..|+-+.   .++++..+++..+.+.|++++.+..+..++-               ..+.++.+.++.+.  
T Consensus       274 P~~a~l~~rgl~TL~---lRm~~~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~~~--  348 (421)
T d2ctza1         274 PFEAWVVLLGMETLS---LRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY--  348 (421)
T ss_dssp             HHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH--
T ss_pred             HHHHHHHhcCCcchh---hHHHHHHHHHHHHHhhhccCCCeeEEecCCcCCCccHHHHHHhcCCCCceEEEEEecCCH--
Confidence            999998888876554   4788999999999999998543322222210               12557788776432  


Q ss_pred             HHHHHHHHHHHHHHH
Q psy15447        387 VASKKLLQTICDMCI  401 (457)
Q Consensus       387 ~~~~~~~~~~~~~l~  401 (457)
                          ..+.++++.|.
T Consensus       349 ----~~a~~f~~~L~  359 (421)
T d2ctza1         349 ----EAAKRFISRLK  359 (421)
T ss_dssp             ----HHHHHHHHTCS
T ss_pred             ----HHHHHHHHcCC
Confidence                13455666554

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.84  E-value=2e-18  Score=170.79  Aligned_cols=304  Identities=10%  Similarity=0.016  Sum_probs=204.4

Q ss_pred             hHHHHHHHHHHHhhcCCCc-----------EEEecccHHHHHHHHHhhcC----------C---------CCEEEEeCcc
Q psy15447        124 NVVHLDLENDIASFMGLEE-----------TALYSFGFSTSASAIAAYVK----------R---------NDAVFVDENI  173 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~~-----------~i~~~sG~~a~~~ai~a~~~----------~---------gd~v~~~~~~  173 (457)
                      .....++-+.|++++|.+.           .+++++|++||..++.+...          .         .-+|+++...
T Consensus       112 t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~  191 (476)
T d1js3a_         112 TELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQA  191 (476)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTC
T ss_pred             HHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccc
Confidence            3444455566777777542           47888899999988855321          1         1257788999


Q ss_pred             cHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        174 NFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       174 h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      |.++.+++.+.|..+..++.+     |+++|++.|++....     ...+.+|+.......+|.+.|+++|.++|++||+
T Consensus       192 H~Si~ka~~~lGl~~~~v~~d~~~~md~~~L~~~i~~~~~~-----g~~p~~VvataGtt~~G~iDpl~~I~~i~~~~~~  266 (476)
T d1js3a_         192 HSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAA-----GLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDI  266 (476)
T ss_dssp             CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHT-----TCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHhcCceEEEeccCCCCCcCHHHHHHHHHHHHhc-----CCCcEEEeecCCCccceeeccHHHHHHHHHhcCc
Confidence            999999999999888777653     799999999876532     1345677777778889999999999999999999


Q ss_pred             EEEEEcCccccccc-CCCCccccccCCCCCCccEEEecCcccccCc--ccEEEecH-HHHHHHHhhCCc-----------
Q psy15447        249 RIFVDESVSFGTLG-STGHGVTEYFGVSTEEVDMIIGSLEHALGSV--GGFCVGSS-YIIEHHRLSGSG-----------  313 (457)
Q Consensus       249 ~li~DEa~~~g~~g-~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~--gG~v~~~~-~~~~~~~~~~~~-----------  313 (457)
                      ||++|.+++....- ...+.  ...|+  ..+|.+..++||+++.+  +|++..++ ............           
T Consensus       267 wlHVDAA~Gg~~~~~~~~~~--~~~gi--~~aDSit~d~HK~l~~P~~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~  342 (476)
T d1js3a_         267 WLHVDAAYAGSAFICPEFRH--LLNGV--EFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGL  342 (476)
T ss_dssp             EEEEECTTGGGGGGSTTTGG--GGTTG--GGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCS
T ss_pred             EEEEecccchhhhhhcchhh--hhcCC--cccceeeecCccccccCCcceeecccchHHHHHHHhcChhhhccccccccc
Confidence            99999998754321 11111  12233  35789999999999753  35554443 322111000000           


Q ss_pred             ------cee--cCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCCeEEEEecCCcc
Q psy15447        314 ------YCF--SASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDD  385 (457)
Q Consensus       314 ------~~~--~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  385 (457)
                            ++.  +-....+...+++..+... ...++.++..+++++|.+.|++   .+++++..++..+++.+.+.... 
T Consensus       343 ~~~~~~~~~~~sr~~~al~lw~~l~~~G~~-g~~~~i~~~~~lA~~l~~~l~~---~~~fel~~~p~l~iV~Fr~~~~d-  417 (476)
T d1js3a_         343 ITDYRHWQLPLGRRFRSLKMWFVFRMYGVK-GLQAYIRKHVQLSHEFEAFVLQ---DPRFEVCAEVTLGLVCFRLKGSD-  417 (476)
T ss_dssp             CCCGGGSSSCSCCCCTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---CTTEEECSCCCSSEEEEEESSCH-
T ss_pred             cccccccccccchhhHHHHHHHHHHHHhHh-HHHHHHHHHHHHHHHHHHHHhc---CCCeEEECCCceEEEEEEccCCh-
Confidence                  011  1112233333333332211 1245677788899999999988   67999988888899998886542 


Q ss_pred             hHHHHHHHHHHHHHHHHcC-eeEeccccCccccCCCCCeEEEEec-CCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        386 EVASKKLLQTICDMCIQAG-FAITCPSHLDQEAKKQKPSIRITCN-ISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~G-i~v~~~~~~~~~~~~~~~~lRi~~~-~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                           ....++.+++.+.| +++.+...      .+..++|+++. ..+|++||+.+++.|+++.+++.
T Consensus       418 -----~~n~~l~~~l~~~G~~~~s~t~~------~g~~~lR~~i~n~~Tt~~did~~~~~i~~~a~~ll  475 (476)
T d1js3a_         418 -----GLNEALLERINSARKIHLVPCRL------RGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELL  475 (476)
T ss_dssp             -----HHHHHHHHHHHHHTSCBCEEEEE------TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHhcCCEEEeeeeE------CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                 14457888888887 44544321      23458999975 55788999999999999988763

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=2e-19  Score=177.20  Aligned_cols=351  Identities=11%  Similarity=0.032  Sum_probs=228.3

Q ss_pred             ECCeeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCc-------EEEeccc
Q psy15447         77 INGIPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEE-------TALYSFG  149 (457)
Q Consensus        77 ~~G~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~-------~i~~~sG  149 (457)
                      .||+.-+|++|..  ...-+|++.+.+.+.+.+--.   ....+..+.+...++.+.|++++|.+.       ..++++|
T Consensus        50 ~dg~~~~n~asf~--~t~~~~~~~~l~~~~~~~N~~---~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~Gg  124 (450)
T d1pmma_          50 LDGNARQNLATFC--QTWDDENVHKLMDLSINKNWI---DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGS  124 (450)
T ss_dssp             GSCCGGGBCSCCS--CCCCCHHHHHHHHHTTTCBTT---CTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSH
T ss_pred             cCCCccccccccc--cCCCCHHHHHHHHHHHhcCCC---CcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCch
Confidence            3788777888752  222358888887777665222   122222356677777778899888532       4788899


Q ss_pred             HHHHHHHHHhhcC------------CCCEEEEeCcccHHHHHHHHhcCCeEEEecCC------CHHHHHHHHHhhchhcc
Q psy15447        150 FSTSASAIAAYVK------------RNDAVFVDENINFAIQTGLIASRCKVQYFKHN------NMQHLEELLRQQDERDT  211 (457)
Q Consensus       150 ~~a~~~ai~a~~~------------~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~------d~~~le~~l~~~~~~~~  211 (457)
                      ++|+..++.+...            ....+++....|.+..++++..|..++.++..      |+++|++.+++      
T Consensus       125 SeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~~~~~~~d~~~L~~~i~~------  198 (450)
T d1pmma_         125 SEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMDPKRMIEACDE------  198 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCT------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeecCCCCcCcHHHHHHHhhh------
Confidence            9999988865421            12346667788999999999999988877532      68888887753      


Q ss_pred             cCCCCccEEEEEecCCCCCCCCCChHHHHHHH------HHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEec
Q psy15447        212 LNSKVTKKFIIVEGVYMNSADICPLKDILSLR------SKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGS  285 (457)
Q Consensus       212 ~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~------~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s  285 (457)
                           .+++|+.....+.+|.+.|+.+|.++|      +++|+++++|.|++.+...-.-....-.+++  .++|.+..+
T Consensus       199 -----~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~~~~--~~aDSi~~s  271 (450)
T d1pmma_         199 -----NTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRL--PRVKSISAS  271 (450)
T ss_dssp             -----TEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTS--TTEEEEEEE
T ss_pred             -----CceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhhhcc--cceeEeecC
Confidence                 557888888888899999998777775      5689999999998765431000000011333  478999999


Q ss_pred             Cccccc-Ccc-cEEEecH-HHHHHHHhhCC---c-----ceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHH
Q psy15447        286 LEHALG-SVG-GFCVGSS-YIIEHHRLSGS---G-----YCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTM  352 (457)
Q Consensus       286 ~sK~lg-~~g-G~v~~~~-~~~~~~~~~~~---~-----~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l  352 (457)
                      .||.++ +.| |++..++ ...........   +     +....+-+.....+...++..+..  ..+..++..+++++|
T Consensus       272 ~HK~~~~p~g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G~~~~~~~~~~la~~l  351 (450)
T d1pmma_         272 GHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYL  351 (450)
T ss_dssp             TTTTTCCCSSCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccCCCCCeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence            999875 334 6666553 32221110000   0     111112222222223334443332  245778888999999


Q ss_pred             HHHhhcccccCCeEEecc----CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEe
Q psy15447        353 HSLLSQHKVTQRFLVQGH----RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITC  428 (457)
Q Consensus       353 ~~~L~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~  428 (457)
                      .+.|++   .+++++..+    ...+++.+.+.+.....   ....++.+.|+++|..+.....|..  ......+|+.+
T Consensus       352 ~~~L~~---~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~---~~~~~l~~~L~~~Gw~v~~~~~p~~--~~~~~~lRvvv  423 (450)
T d1pmma_         352 ADEIAK---LGPYEFICTGRPDEGIPAVCFKLKDGEDPG---YTLYDLSERLRLRGWQVPAFTLGGE--ATDIVVMRIMC  423 (450)
T ss_dssp             HHHHHT---TSCEEEEEECCTTTBSSEEEEEECTTCCCS---SCHHHHHHHHHTTTCBCCEEECCTT--CTTCEEEEEEC
T ss_pred             HHHHHh---CCCeEEEeCCCCCCceEEEEEecCCcccCC---CCHHHHHHHHHHcCCeeeccCcCCC--cCCcEEEEEEc
Confidence            999998   577877643    22567888876532110   0345788999999977654333211  12235799999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHhcC
Q psy15447        429 NISHTEQDMNSLIETLCKSHDIAVQ  453 (457)
Q Consensus       429 ~~~~t~edi~~~~~~l~~~~~~~~~  453 (457)
                      ....|++++|++++.|+++++.+.+
T Consensus       424 ~~~~t~e~~d~lv~dl~~~v~~l~~  448 (450)
T d1pmma_         424 RRGFEMDFAELLLEDYKASLKYLSD  448 (450)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999988753

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.84  E-value=3.7e-19  Score=174.24  Aligned_cols=331  Identities=8%  Similarity=0.006  Sum_probs=198.2

Q ss_pred             eEEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEe--cccHH
Q psy15447         82 CINFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALY--SFGFS  151 (457)
Q Consensus        82 ~id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~--~sG~~  151 (457)
                      .||++-+.|.+-.+.    |.|++|. +++.........+....|..++.+++++.+.+..+    .+..+..  ++|..
T Consensus        31 kInL~iG~~~d~~g~~~~~~~V~~A~-~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (412)
T d1yaaa_          31 KVDLGIGAYRDDNGKPWVLPSVKAAE-KLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTG  109 (412)
T ss_dssp             CEECSSCCCBCTTSCBCCCHHHHHHH-HHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             cEEeecCCCcCCCCCCCCcHHHHHHH-HHHHhCcccCCCCCCCCCCHHHHHHHHHHHhcccCccccccceeEEecccchh
Confidence            478876544332222    4566653 33332222222233345666666666555554443    1222222  22333


Q ss_pred             HHHHH--HHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEE
Q psy15447        152 TSASA--IAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFII  222 (457)
Q Consensus       152 a~~~a--i~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi  222 (457)
                      +...+  +.....+||.|+++.+++..+...+...|.++..++..       +.+.++..+....        +.+++++
T Consensus       110 ~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~  181 (412)
T d1yaaa_         110 ALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAP--------EGSIFVL  181 (412)
T ss_dssp             HHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHSC--------TTCEEEE
T ss_pred             HHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccccccccccchhhhcccccCC--------CceEEEE
Confidence            33222  34557899999999999999999999999988877642       5677777776543        4667899


Q ss_pred             EecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCC-cc-----ccccCCCCCCccEEEecCcccccCc
Q psy15447        223 VEGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGH-GV-----TEYFGVSTEEVDMIIGSLEHALGSV  293 (457)
Q Consensus       223 ~e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~-~~-----~~~~~~~~~~~Di~~~s~sK~lg~~  293 (457)
                      +.+++||||.+.+   +++|.++|++|++++|.||+|....++.... ..     ....+.  ....+++.|+||.++.+
T Consensus       182 i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~~~~  259 (412)
T d1yaaa_         182 HSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLST--VSPVFVCQSFAKNAGMY  259 (412)
T ss_dssp             ECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTT--TCCEEEEEECTTTSCCG
T ss_pred             ecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhcccc--CCCeEEEEecCCccccC
Confidence            9999999999998   7899999999999999999997655532110 00     011111  12247889999999876


Q ss_pred             c---cEEEecHHHHHHH-------HhhC---CcceecCCCcHHHHHHHHHHHHH-------HhhCcHHHHHHHHHHHHHH
Q psy15447        294 G---GFCVGSSYIIEHH-------RLSG---SGYCFSASLPPFLAVAANKALHL-------LKANPSLLTKLREKCNTMH  353 (457)
Q Consensus       294 g---G~v~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~aaa~a~l~~-------~~~~~~~~~~l~~~~~~l~  353 (457)
                      |   ||++++.++++..       ....   ...++. +.+.+.+.++...+..       .+....++++++++++.+.
T Consensus       260 G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~  338 (412)
T d1yaaa_         260 GERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVS-NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALR  338 (412)
T ss_dssp             GGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6   9988875432211       1000   011122 2344444444433321       1112346677888888888


Q ss_pred             HHhhcccccCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCC
Q psy15447        354 SLLSQHKVTQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISH  432 (457)
Q Consensus       354 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~  432 (457)
                      +.|++......+....+.++.+.++.+  +.          +++++|+ ++||++.++             .||+++. .
T Consensus       339 ~~L~~~g~~~~~~~~~~~gG~F~~~~l--s~----------e~~~~L~~e~~V~~~~g-------------~Ris~~g-~  392 (412)
T d1yaaa_         339 DHLVKLGTPGNWDHIVNQCGMFSFTGL--TP----------QMVKRLEETHAVYLVAS-------------GRASIAG-L  392 (412)
T ss_dssp             HHHHHHTCSSCCTHHHHCCSSEEECCC--CH----------HHHHHHHHHHCEECCTT-------------SEEEGGG-C
T ss_pred             HHHHHhCCCCCCceeCCCceEEEecCc--CH----------HHHHHHHHhCCEEECCC-------------CEEEecc-C
Confidence            888873211113333344565554322  21          3556665 569987542             4888754 6


Q ss_pred             CHHHHHHHHHHHHHHHHH
Q psy15447        433 TEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       433 t~edi~~~~~~l~~~~~~  450 (457)
                      ++++|+++.++|+++++.
T Consensus       393 ~~~~i~~l~~ai~~v~k~  410 (412)
T d1yaaa_         393 NQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             CTTTHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHh
Confidence            788999999999998764

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=8.5e-21  Score=185.27  Aligned_cols=326  Identities=10%  Similarity=0.029  Sum_probs=191.9

Q ss_pred             EEeecCCccCCCCC----hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcC----CCcEEEecccHH---
Q psy15447         83 INFATHNYLSFVEN----PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMG----LEETALYSFGFS---  151 (457)
Q Consensus        83 id~~s~~~l~~~~~----p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~~i~~~sG~~---  151 (457)
                      ||++-+.|.+-.+.    |.|++|.. ++.........+....|..++++++++.+.+..+    .+.++.+.+++.   
T Consensus        29 InL~iG~~~d~~g~~p~~~~V~~A~~-~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~i~~~~~~~~~~~  107 (397)
T d3tata_          29 VNLSIGLYYNEDGIIPQLQAVAEAEA-RLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGA  107 (397)
T ss_dssp             EECSCCSCCCTTSSCCCCHHHHHHHH-HHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHTTCEEECCBSHHHHH
T ss_pred             EEccCCCCcCCCCCCCCcHHHHHHHH-HHHhCcccCCCCCCcccCHHHHHHHHHHHhhccCCcCCcCcEEEecCchhHHH
Confidence            78877655443333    34555433 3322222222233334554444444444443333    233444333332   


Q ss_pred             -HHHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEE
Q psy15447        152 -TSASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIV  223 (457)
Q Consensus       152 -a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~  223 (457)
                       ++...+.++..+||.|+++.++|..+...++..|.++..++..       |.+++.+.+....        ++.+++++
T Consensus       108 ~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  179 (397)
T d3tata_         108 LKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLP--------ARSIVLLH  179 (397)
T ss_dssp             HHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTTSSCCHHHHHHHHTTCC--------SSCCCEEC
T ss_pred             HHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhccccchHHHHHHhhhcc--------cccEEEEe
Confidence             3445566678999999999999999999999999999888753       4555555554432        56678889


Q ss_pred             ecCCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cc-cccCCCCCCccEEEecCcccccCcc---c
Q psy15447        224 EGVYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VT-EYFGVSTEEVDMIIGSLEHALGSVG---G  295 (457)
Q Consensus       224 e~v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~-~~~~~~~~~~Di~~~s~sK~lg~~g---G  295 (457)
                      .+++||||.+.+   +++|.++|++|++++|.||+|+...++..... .. ...+. .+. -+++.|+||.++.+|   |
T Consensus       180 ~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~~~-~i~~~s~SK~~~~~G~RiG  257 (397)
T d3tata_         180 PCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA-GLP-ALVSNSFSKIFSLYGERVG  257 (397)
T ss_dssp             SSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTT-TCC-CEECBCCHHHHTBTTTCCB
T ss_pred             cCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhc-CCc-eEEEecCcccccccCcccc
Confidence            999999999998   67999999999999999999986555421111 11 11111 122 378899999997665   8


Q ss_pred             EEEecHHHHHHH-------HhhCCcceecCCCcHHHHHHHHHHHH---HHh----hCcHHHHHHHHHHHHHHHHhhcccc
Q psy15447        296 FCVGSSYIIEHH-------RLSGSGYCFSASLPPFLAVAANKALH---LLK----ANPSLLTKLREKCNTMHSLLSQHKV  361 (457)
Q Consensus       296 ~v~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~aaa~a~l~---~~~----~~~~~~~~l~~~~~~l~~~L~~~~~  361 (457)
                      |++++...++..       ..... ..++.. +...++++...+.   ...    ....++++++++.+.+.+.|.+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~  335 (397)
T d3tata_         258 GLSVMCEDAEAAGRVLGQLKATVR-RNYSSP-PNFGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEMP  335 (397)
T ss_dssp             CCEEECSSTTHHHHHHHHHHHHTT-TTTSSC-CSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCT
T ss_pred             ccccchhHHHHHHHHHHHHHHHhh-cccccc-cHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            887765433322       11111 122222 3333333322221   111    1123455666677777777766321


Q ss_pred             cCCeEEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHHH-cCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHH
Q psy15447        362 TQRFLVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCIQ-AGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSL  440 (457)
Q Consensus       362 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~  440 (457)
                      ..++.+..+..|.+.|+.+.  .          +.+++|++ +||++.++             .||+++. +++++|+++
T Consensus       336 ~~~~~~~~~~~G~F~~~~ls--~----------e~~~~L~~e~~V~l~~g-------------~Ri~~a~-~~~~~i~~~  389 (397)
T d3tata_         336 ERNFDYLLNQRGMFSYTGLS--A----------AQVDRLREEFGVYLIAS-------------GRMCVAG-LNTANVQRV  389 (397)
T ss_dssp             TSCTTHHHHCCSSBCCCCCC--H----------HHHHHHTTTTCEECCSS-------------SCCBTTS-CCTTTHHHH
T ss_pred             CCceEEEcCCCceEEecCcC--H----------HHHHHHHHhCCEEeCCC-------------CEEEecc-CCHHHHHHH
Confidence            11233334556666665432  1          35666765 49987653             3777753 789999999


Q ss_pred             HHHHHHH
Q psy15447        441 IETLCKS  447 (457)
Q Consensus       441 ~~~l~~~  447 (457)
                      .++|+++
T Consensus       390 ~~ai~~v  396 (397)
T d3tata_         390 AKAFAAV  396 (397)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999876

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.83  E-value=8.8e-20  Score=177.84  Aligned_cols=328  Identities=12%  Similarity=0.015  Sum_probs=201.4

Q ss_pred             eEEeecCCccCCCC----ChhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCC---CcEEEecccHHH--
Q psy15447         82 CINFATHNYLSFVE----NPDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGL---EETALYSFGFST--  152 (457)
Q Consensus        82 ~id~~s~~~l~~~~----~p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sG~~a--  152 (457)
                      .||++-+.|.+-.+    .|.|++|..+.+++....  ++....|..++.+++++.+.+..+.   ...+++++|+.+  
T Consensus        28 ~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~--~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (394)
T d2ay1a_          28 KIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTK--TYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALR  105 (394)
T ss_dssp             CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCC--CCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHH
T ss_pred             CEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCC--CCCCCCCCHHHHHHHHHHHhccccccccccceeccCchHHHH
Confidence            36777654433222    367888888777663321  2333456666666666666554443   234556666544  


Q ss_pred             HHHHHHhhcCCCCEEEEeCcccHHHHHHHHhcCCeEEEecCC-------CHHHHHHHHHhhchhcccCCCCccEEEEEec
Q psy15447        153 SASAIAAYVKRNDAVFVDENINFAIQTGLIASRCKVQYFKHN-------NMQHLEELLRQQDERDTLNSKVTKKFIIVEG  225 (457)
Q Consensus       153 ~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-------d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~  225 (457)
                      +...+..+.++||.|+++.+++..+...++..|.+++.++..       +.+++++......        +++.++++.+
T Consensus       106 l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~~~  177 (394)
T d2ay1a_         106 QALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAK--------KGDMVLLHGC  177 (394)
T ss_dssp             HHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCC--------TTCEEEEESS
T ss_pred             HHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhcccccchhHHHHHhhcc--------cCcEEEEeCC
Confidence            445556678999999999999999999999999988877642       3566666665533        4567888999


Q ss_pred             CCCCCCCCCC---hHHHHHHHHHcCcEEEEEcCcccccccCCCCc-cccccCCCCCCccEEEecCcccccCcc---cEEE
Q psy15447        226 VYMNSADICP---LKDILSLRSKYQARIFVDESVSFGTLGSTGHG-VTEYFGVSTEEVDMIIGSLEHALGSVG---GFCV  298 (457)
Q Consensus       226 v~~~~G~i~~---l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~-~~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~  298 (457)
                      ++||||.+.+   +++|.++|++|++++|.||+|....++..... ........ ....+++.|++|.++..|   |++.
T Consensus       178 p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~sk~~~~~G~R~G~~~  256 (394)
T d2ay1a_         178 CHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASR-IPEVLIAASCSKNFGIYRERTGCLL  256 (394)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHH-CSSEEEEEECTTTTTCGGGCEEEEE
T ss_pred             CCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhh-cccccccccccccccCCcccccchh
Confidence            9999999998   67999999999999999999976555421111 11110000 111366779999986544   8887


Q ss_pred             ecHHHHHHHHhhC------CcceecCCCcHHHHHHHHHHHH--H----H-hhCcHHHHHHHHHHHHHHHHhhcccccCCe
Q psy15447        299 GSSYIIEHHRLSG------SGYCFSASLPPFLAVAANKALH--L----L-KANPSLLTKLREKCNTMHSLLSQHKVTQRF  365 (457)
Q Consensus       299 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~aaa~a~l~--~----~-~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~  365 (457)
                      ++....+......      ....++. .+...++.+...+.  .    . +....++++++++++.+.+.|+++.....+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~  335 (394)
T d2ay1a_         257 ALCADAATRELAQGAMAFLNRQTYSF-PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRF  335 (394)
T ss_dssp             EECSSHHHHHHHHHHHHHHHHTTTSS-CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTT
T ss_pred             hchhHHHHHHHhhhhhHhhhcccccc-hhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence            7765444332110      0011111 12222222222111  0    1 111245677778888888888773211113


Q ss_pred             EEeccCCCCeEEEEecCCcchHHHHHHHHHHHHHHH-HcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy15447        366 LVQGHRDTPLKYLYLQKSDDEVASKKLLQTICDMCI-QAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETL  444 (457)
Q Consensus       366 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l  444 (457)
                      .+..+..|.+.++.+.  .          +.+++|+ ++||++.++             .||+++. +++++|+++.++|
T Consensus       336 ~~~~~~~G~F~~~~ls--~----------~~~~~L~~~~~V~~~~g-------------~Ri~~a~-l~~~~i~~l~~ai  389 (394)
T d2ay1a_         336 GFVAEHRGMFSRLGAT--P----------EQVKRIKEEFGIYMVGD-------------SRINIAG-LNDNTIPILARAI  389 (394)
T ss_dssp             THHHHCCSSEEECCCC--H----------HHHHHHHHHHCEECCTT-------------CEEEGGG-CCTTTHHHHHHHH
T ss_pred             eeECCCceeEEecCcC--H----------HHHHHHHHhCCEEecCC-------------CEEEecC-CCHHHHHHHHHHH
Confidence            3333455666655332  1          3456675 569987652             4888753 7899999999999


Q ss_pred             HHH
Q psy15447        445 CKS  447 (457)
Q Consensus       445 ~~~  447 (457)
                      .++
T Consensus       390 ~~v  392 (394)
T d2ay1a_         390 IEV  392 (394)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            875

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.83  E-value=1e-18  Score=168.62  Aligned_cols=312  Identities=13%  Similarity=0.140  Sum_probs=216.1

Q ss_pred             hhhHHHHHHHHHhcCCCCCCCCCcccChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhc-CC--CCEEEEeCcc
Q psy15447         97 PDIEKCAIDCIDKNGVGSCGPRGFYGTNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYV-KR--NDAVFVDENI  173 (457)
Q Consensus        97 p~i~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~-~~--gd~v~~~~~~  173 (457)
                      ++-.+++.+.++. +.        +...+...++|+++++++|.+.++.++||+.|+..++.++. ++  ++.|+++..+
T Consensus        12 ~~~~~~v~~~l~~-~~--------~~~G~~v~~fE~~~~~~~g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p~~t   82 (371)
T d2fnua1          12 KEDKKAVLEVLNS-KQ--------LTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPIS   82 (371)
T ss_dssp             HHHHHHHHHHHTS-SC--------CSSSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSS
T ss_pred             HHHHHHHHHHHcC-CC--------ccCCHHHHHHHHHHHHHHCcCeEEEEecHHHHHHHHHHHhcccCCCCCeeeccccc
Confidence            4556778888764 21        12346789999999999999999999999999999999874 33  4589999999


Q ss_pred             cHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCc
Q psy15447        174 NFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQA  248 (457)
Q Consensus       174 h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~  248 (457)
                      +.++..++...|++++.++-+     +.+++++.+           ..++++|+..+.+   |...++++|.++|+++|+
T Consensus        83 ~~a~~~ai~~~G~~pv~vDi~~~~~~~~~~~~~~~-----------~~~t~avi~vh~~---G~~~~~~~i~~~~~~~~i  148 (371)
T d2fnua1          83 FVATANMLLESGYTPVFAGIKNDGNIDELALEKLI-----------NERTKAIVSVDYA---GKSVEVESVQKLCKKHSL  148 (371)
T ss_dssp             CTHHHHHHHHTTCEEEECCBCTTSSBCGGGSGGGC-----------CTTEEEEEEECGG---GCCCCHHHHHHHHHHHTC
T ss_pred             ccccceeeeccCcccccccccccccccchhhhhhc-----------cchhhcccccccc---ccccccccccccccccch
Confidence            999999999999999888643     234433322           1456777776655   778999999999999999


Q ss_pred             EEEEEcCcccccccCCCCccccccCCCCCCccEEEecC--ccccc-CcccEEEec-HHHHHHHHhhC-Cc----------
Q psy15447        249 RIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSL--EHALG-SVGGFCVGS-SYIIEHHRLSG-SG----------  313 (457)
Q Consensus       249 ~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~--sK~lg-~~gG~v~~~-~~~~~~~~~~~-~~----------  313 (457)
                      ++|.|.+|++|..-. |... ..+|      |+.+.||  +|.++ +.||+++++ +++.+.++... ++          
T Consensus       149 ~lIEDaaqa~Ga~~~-~~~~-G~~g------~~~~~Sf~~~K~l~~g~GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~  220 (371)
T d2fnua1         149 SFLSDSSHALGSEYQ-NKKV-GGFA------LASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGE  220 (371)
T ss_dssp             EEEEECTTCTTCEET-TEET-TSSS------SEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEE
T ss_pred             hhccchhhccCceec-cccC-Cccc------cccccccccccccccccceEEEeechhhhhhcccccccccccccccccc
Confidence            999999999876421 1111 1122      4556677  78885 346776665 56666664321 11          


Q ss_pred             ---ceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhhcccccCCeEEecc-----CCCCeEEEEecCCcc
Q psy15447        314 ---YCFSASLPPFLAVAANKALHLLKANPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH-----RDTPLKYLYLQKSDD  385 (457)
Q Consensus       314 ---~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~  385 (457)
                         ..+...++.+.++.++..|+.+++   ..++-+++.+++.+.|++   .+++.+..+     .....+++.+.....
T Consensus       221 ~~~~G~n~r~sel~Aaigl~qL~~l~~---~~~~R~~~~~~y~~~l~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  294 (371)
T d2fnua1         221 VKSIGHNFRLNEIQSALGLSQLKKAPF---LMQKREEAALTYDRIFKD---NPYFTPLHPLLKDKSSNHLYPILMHQKFF  294 (371)
T ss_dssp             ESSCCCBCCCCHHHHHHHHHHHTTHHH---HHHHHHHHHHHHHHHHTT---CSSEEESGGGCSSCCCCSCEEEEECGGGG
T ss_pred             cccccccccccchhhhhhhhhhhhccc---hhhhhhhhhhhhcccccc---cccccccccccccccccccccccccccch
Confidence               113334789998888888776654   556666788888888887   456555322     123445555554321


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCcccc-------CCC---------CCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEA-------KKQ---------KPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-------~~~---------~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .     ....+.+.|.++||.+++...|....       ...         ...+.+.++..+|++|++++++.|.+.++
T Consensus       295 ~-----~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~  369 (371)
T d2fnua1         295 T-----CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE  369 (371)
T ss_dssp             G-----GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             h-----HHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHH
Confidence            1     23578899999999887654332200       011         23577777888899999999999998876


Q ss_pred             H
Q psy15447        450 I  450 (457)
Q Consensus       450 ~  450 (457)
                      .
T Consensus       370 ~  370 (371)
T d2fnua1         370 S  370 (371)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.83  E-value=3.7e-18  Score=165.72  Aligned_cols=293  Identities=12%  Similarity=0.090  Sum_probs=193.6

Q ss_pred             hHHHHHHHHHHHhhcCCC--cEEEec-ccHHHHHHHHHhhcCCCCEEEEeCcccHHHHH--HHHhcCCeEEEecC-----
Q psy15447        124 NVVHLDLENDIASFMGLE--ETALYS-FGFSTSASAIAAYVKRNDAVFVDENINFAIQT--GLIASRCKVQYFKH-----  193 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~--~~i~~~-sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--~~~~~g~~~~~~~~-----  193 (457)
                      .+...++++.|+++++.+  .+++++ ||+.++++++..+..+++.+++....|.+...  .....+.....+..     
T Consensus        49 ~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~vl~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (388)
T d2ch1a1          49 FRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPDRP  128 (388)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTTSC
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhccccccccccccccccccchhhhhhhcccccccccccccc
Confidence            567888999999999965  456554 68899999999999999887776655544332  23333444443332     


Q ss_pred             CCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccC
Q psy15447        194 NNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFG  273 (457)
Q Consensus       194 ~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~  273 (457)
                      .+.+..+.....          .+++++.+.+..+.+|.+.|++++.++|+++|+++++|.++++|...         .+
T Consensus       129 ~~~~~~~~~~~~----------~~~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~g~~p---------id  189 (388)
T d2ch1a1         129 FSLETLARAIEL----------HQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVP---------FY  189 (388)
T ss_dssp             CCHHHHHHHHHH----------HCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBC---------CC
T ss_pred             cchhhhhhhhcc----------CCcceeeeeecccccccccchhhhcchhccccceeeeeeeecccccc---------cc
Confidence            245555555543          34568888888889999999999999999999999999999876432         33


Q ss_pred             CCCCCccEEEecCcccccCc-c-cEEEecHHHHHHHHhhCCc---------------------ceecCCCcHHHHHHHHH
Q psy15447        274 VSTEEVDMIIGSLEHALGSV-G-GFCVGSSYIIEHHRLSGSG---------------------YCFSASLPPFLAVAANK  330 (457)
Q Consensus       274 ~~~~~~Di~~~s~sK~lg~~-g-G~v~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aaa~a  330 (457)
                      ++..++|+++.|-+|+++++ | |++..++...+.......+                     ..+..+.+.....+..+
T Consensus       190 ~~~~~~d~~~~s~~K~~~gp~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~  269 (388)
T d2ch1a1         190 MDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALRE  269 (388)
T ss_dssp             TTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHH
T ss_pred             hhccCceEEEEccccccCCCCeEEEEeccHHHHHhhhcccCccccccccchhhhhhhcccccccccCccchHHHHHHHHH
Confidence            44456799999999999643 3 6778887777655322111                     01222345555555666


Q ss_pred             HHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEe-cc---CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHc-
Q psy15447        331 ALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQ-GH---RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQA-  403 (457)
Q Consensus       331 ~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~-~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~-  403 (457)
                      +++.+...  .....+.++.....+..+..    .++... .+   ....++.+.+++..       ...++.+.|.++ 
T Consensus       270 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~rs~~v~~~~~p~g~-------~~~~l~~~l~~~~  338 (388)
T d2ch1a1         270 ALAQIAEEGLENQIKRRIECAQILYEGLGK----MGLDIFVKDPRHRLPTVTGIMIPKGV-------DWWKVSQYAMNNF  338 (388)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCBSSCSGGGBCTTEEEEECCTTC-------CHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhhhh----cccccccCCHHHhCCeEEEEECCCCC-------CHHHHHHHHhhcC
Confidence            66655432  22333444444445555544    222221 11   12345667776544       456788888765 


Q ss_pred             CeeEeccccCccccCCCCCeEEEE-ecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        404 GFAITCPSHLDQEAKKQKPSIRIT-CNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       404 Gi~v~~~~~~~~~~~~~~~~lRi~-~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ||.+..+..+     ..++.+||+ ++...|+|||++++++|+++++..
T Consensus       339 gI~v~~G~~~-----~~~~~~RIs~~g~~~t~edI~~ll~alke~L~~~  382 (388)
T d2ch1a1         339 SLEVQGGLGP-----TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKAT  382 (388)
T ss_dssp             CBCCBCCCGG-----GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEeCCCcc-----ccCCEEEEcCCcCCCCHHHHHHHHHHHHHHHHhh
Confidence            9998876543     225689999 567779999999999999999873

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=1.4e-18  Score=165.75  Aligned_cols=291  Identities=12%  Similarity=0.047  Sum_probs=191.6

Q ss_pred             hHHHHHHHHHHHhhcCCC-cE-EEecccHHHHHHHHHhhcCCCCEEEEe-CcccHH-HHHHHHhcCCeEEEecC--CCHH
Q psy15447        124 NVVHLDLENDIASFMGLE-ET-ALYSFGFSTSASAIAAYVKRNDAVFVD-ENINFA-IQTGLIASRCKVQYFKH--NNMQ  197 (457)
Q Consensus       124 ~~~~~~l~~~la~~~g~~-~~-i~~~sG~~a~~~ai~a~~~~gd~v~~~-~~~h~~-~~~~~~~~g~~~~~~~~--~d~~  197 (457)
                      .+...+.++.|.++++.+ ++ ++.+||+.++++++..+.++||.+++- .+.++. ....++..+..+...+.  .+..
T Consensus        32 ~~i~~~~~~~l~~ll~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vlv~~~G~f~~~~~~~a~~~~~~~~~~~~~~g~~~  111 (348)
T d1iuga_          32 REVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYPYGDTP  111 (348)
T ss_dssp             HHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECCTTCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHhcccccccceeecchHHHHHHHHHHHhcCcccccccccCCCcc
Confidence            466778889999999876 44 455688899999999999999866554 443433 22334455555544432  2211


Q ss_pred             HHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcC--cEEEEEcCcccccccCCCCccccccCCC
Q psy15447        198 HLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQ--ARIFVDESVSFGTLGSTGHGVTEYFGVS  275 (457)
Q Consensus       198 ~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g--~~li~DEa~~~g~~g~~g~~~~~~~~~~  275 (457)
                      .++.. .          .....++++.+..+.+|.+.|+++|.++|++|+  .++++|.++++|...         ..++
T Consensus       112 ~~~~~-~----------~~~~~~v~~~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss~g~~~---------i~~d  171 (348)
T d1iuga_         112 RPEDV-A----------KEGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGE---------VALE  171 (348)
T ss_dssp             CTTTS-C----------CSSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBC---------CCSG
T ss_pred             ccccc-c----------ccCCCeeEEEecchhhhhhccHHHHHHHHHhhhccceeechhhhcccccc---------cccc
Confidence            11111 1          134457777777778899999999999999885  799999999887542         2333


Q ss_pred             CCCccEEEecCcccc-cCcc-cEEEecHHHHHHHHhh-------------CCcceecCCCcHHHHHHHHHHHHHHhhC-c
Q psy15447        276 TEEVDMIIGSLEHAL-GSVG-GFCVGSSYIIEHHRLS-------------GSGYCFSASLPPFLAVAANKALHLLKAN-P  339 (457)
Q Consensus       276 ~~~~Di~~~s~sK~l-g~~g-G~v~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~aaa~a~l~~~~~~-~  339 (457)
                      ..++|++++|-+|++ |++| |+++.+++.++.+...             ..+.+ ..++|.....+..++|+.+.+. .
T Consensus       172 ~~~iD~~~~~sqK~l~gppG~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~-~~Tp~v~~i~~l~~aL~~~~~~~~  250 (348)
T d1iuga_         172 AMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGES-AWTPAINLVLAVAAVLEEVLPRLE  250 (348)
T ss_dssp             GGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCC-SSCCCHHHHHHHHHHHHHHGGGHH
T ss_pred             cccCCEEEeccccceecCCceeeeeechHHHhhhcccccccchhhhhhhhccCcc-cccccchHHHHHHHHHHHHHHHHh
Confidence            345799999999999 6666 7888888877654211             11111 1234555666777888776543 2


Q ss_pred             HHHHHHHHHHHHHHHHhhcccccCCeEEeccCCCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccC
Q psy15447        340 SLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRDTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAK  418 (457)
Q Consensus       340 ~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~  418 (457)
                      +..++.+...+.++..+++    .|+.......++ +..+.+++..       +..++.+.|.++|+.+.++..+     
T Consensus       251 ~~~~~~~~~~~~~~~~~~~----~gl~~~~~~~s~~v~~~~~P~g~-------~~~~~~~~l~~~gi~i~~G~~~-----  314 (348)
T d1iuga_         251 EHLALKAWQNALLYGVGEE----GGLRPVPKRFSPAVAAFYLPEGV-------PYARVKEAFAQRGAVIAGGQGP-----  314 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHH----TTCEESCSSBCTTCEEEECCTTC-------CHHHHHHHHHTTTEECEECCGG-----
T ss_pred             HHHHHHHHHHHHHhhhhhh----hhhccChhhcCCeEEEEECCCCC-------CHHHHHHHHHHCCeEEEcCccc-----
Confidence            2222222233344444444    677765333333 5667776554       4567889999999998776532     


Q ss_pred             CCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHh
Q psy15447        419 KQKPSIRITCNISHTEQDMNSLIETLCKSHDIA  451 (457)
Q Consensus       419 ~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~  451 (457)
                      ..+..+||+.-...+++|+++++++|+++++++
T Consensus       315 l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l~~~  347 (348)
T d1iuga_         315 LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEI  347 (348)
T ss_dssp             GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            234689999766899999999999999999875

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.81  E-value=8.1e-18  Score=160.82  Aligned_cols=208  Identities=14%  Similarity=0.182  Sum_probs=159.3

Q ss_pred             ChHHHHHHHHHHHhhcCCCcEEEecccHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHHH----hcCCeEEEecCCCHHH
Q psy15447        123 TNVVHLDLENDIASFMGLEETALYSFGFSTSASAIAAYVKRNDAVFVDENINFAIQTGLI----ASRCKVQYFKHNNMQH  198 (457)
Q Consensus       123 ~~~~~~~l~~~la~~~g~~~~i~~~sG~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~~----~~g~~~~~~~~~d~~~  198 (457)
                      .++....||++|+++.|.+.++.++||..|+.+++ .++++||.|++....|+.+..-+.    ..|..+..++ .+.++
T Consensus        53 gnPT~~~lE~~la~LE~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~-~~~~~  130 (393)
T d1n8pa_          53 QNPNRENLERAVAALENAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN-DLLND  130 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES-SHHHH
T ss_pred             CChHHHHHHHHHHHHhCCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee-cchHH
Confidence            46788999999999999999999999998886554 667889999988888877665543    3356666665 35567


Q ss_pred             HHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHH----HcCcEEEEEcCcccccccCCCCccccccCC
Q psy15447        199 LEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRS----KYQARIFVDESVSFGTLGSTGHGVTEYFGV  274 (457)
Q Consensus       199 le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~----~~g~~li~DEa~~~g~~g~~g~~~~~~~~~  274 (457)
                      +++.++           +++++|++|++.||+..+.++++|+++|+    ++|+++|+|..++....-+         .+
T Consensus       131 ~~~~i~-----------~~t~lv~~EspsNP~l~v~Di~~ia~~a~~~~~~~g~~lvVDnT~atP~~~~---------Pl  190 (393)
T d1n8pa_         131 LPQLIK-----------ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISN---------PL  190 (393)
T ss_dssp             HHHHSC-----------SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHCC---------GG
T ss_pred             HHHHhh-----------hhcceeEecCcchhhhhccchhhhhhhhhhhcccCCceEEEecCccCcccCC---------ch
Confidence            776663           46789999999999999999999999999    7789999999865332211         11


Q ss_pred             CCCCccEEEecCcccccC----cccEEE-ecHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHhhCcHHHHHHHHHH
Q psy15447        275 STEEVDMIIGSLEHALGS----VGGFCV-GSSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLKANPSLLTKLREKC  349 (457)
Q Consensus       275 ~~~~~Di~~~s~sK~lg~----~gG~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~~~~~~~l~~~~  349 (457)
                       ..++||++.|++|.+++    .||.++ .++++.+.++...  ..++..++|..|...+..++-+.   .++++..+++
T Consensus       191 -~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~~--~~~G~~~~p~~a~ll~rgl~Tl~---lR~~~~~~nA  264 (393)
T d1n8pa_         191 -NFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ--NAIGAIPSPFDAWLTHRGLKTLH---LRVRQAALSA  264 (393)
T ss_dssp             -GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHTTHH---HHHHHHHHHH
T ss_pred             -hhCCCEEEEccccccCCCCccccceeeecchhHHHHHHHHH--hhcCCCCChHHHHHHHhCCcchh---hHHHHHHHHH
Confidence             12459999999999964    457765 4566666665432  34566789999888888776554   4788899999


Q ss_pred             HHHHHHhhc
Q psy15447        350 NTMHSLLSQ  358 (457)
Q Consensus       350 ~~l~~~L~~  358 (457)
                      ..+.+.|+.
T Consensus       265 ~~lA~~L~~  273 (393)
T d1n8pa_         265 NKIAEFLAA  273 (393)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHHh
Confidence            999999976

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.81  E-value=1.9e-18  Score=165.44  Aligned_cols=338  Identities=11%  Similarity=0.079  Sum_probs=207.4

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccC--hHHHHHHH-HHHHhhcCCCcE-----EEeccc
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGT--NVVHLDLE-NDIASFMGLEET-----ALYSFG  149 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~--~~~~~~l~-~~la~~~g~~~~-----i~~~sG  149 (457)
                      +..|++. |-|+    .+|.+.++....+ .+|..++.+-|.+.|.  .+..+.++ ++..++|+.+.+     +-..||
T Consensus        27 ~~~l~LiaSEN~----~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp~SG  102 (463)
T d2a7va1          27 CRGLELIASENF----CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSG  102 (463)
T ss_dssp             HHSEECCTTCCC----CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSH
T ss_pred             hcCeeEeccCCc----CCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCcccccc
Confidence            3456664 3333    2588888887777 4677777777765554  34444443 445558887753     556799


Q ss_pred             HHHHHHHHHhhcCCCCEEEEeCcccHHHHH--------HHHhcCC--eEEEecC------CCHHHHHHHHHhhchhcccC
Q psy15447        150 FSTSASAIAAYVKRNDAVFVDENINFAIQT--------GLIASRC--KVQYFKH------NNMQHLEELLRQQDERDTLN  213 (457)
Q Consensus       150 ~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~--------~~~~~g~--~~~~~~~------~d~~~le~~l~~~~~~~~~~  213 (457)
                      +.||.+++.++++|||.|+.-...|+..+.        ....++.  +...++.      -|.+++++..++.+      
T Consensus       103 s~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~~~~~IDyd~~~~~a~~~k------  176 (463)
T d2a7va1         103 SPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFR------  176 (463)
T ss_dssp             HHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccCCCCcCcHHHHHHHHhhcC------
Confidence            999999999999999999876555444321        1222222  2222221      28999999988753      


Q ss_pred             CCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-cC
Q psy15447        214 SKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-GS  292 (457)
Q Consensus       214 ~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g~  292 (457)
                          +++|++-...  .-...|+++++++|++.|++|++|-+|-.|.+.. |. +..-+    ...|++++|.+|+| |+
T Consensus       177 ----PklIi~G~S~--y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~-g~-~~sP~----~~aDvvt~tTHKTlrGP  244 (463)
T d2a7va1         177 ----PRLIIAGTSA--YARLIDYARMREVCDEVKAHLLADMAHISGLVAA-KV-IPSPF----KHADIVTTTTHKTLRGA  244 (463)
T ss_dssp             ----CSEEEECCSS--CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHT-TS-SCCGG----GTCSEEEEESSGGGCSC
T ss_pred             ----CceEEecccc--cccccCHHHHHHHhhcccceEEechhhhhHHhhh-hh-hcChh----hhhhhhhchhhhhhcCC
Confidence                3577764322  2235679999999999999999999997765531 11 11111    23599999999999 77


Q ss_pred             cccEEEecH---------------HHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh-hCcHHHHHHHHHHHHHHHHh
Q psy15447        293 VGGFCVGSS---------------YIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK-ANPSLLTKLREKCNTMHSLL  356 (457)
Q Consensus       293 ~gG~v~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~-~~~~~~~~l~~~~~~l~~~L  356 (457)
                      .||++.+++               ++.+.+...-.+...++..+...++.+.+-.+.+. +..+..+++.+|++.|.+.|
T Consensus       245 rgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L  324 (463)
T d2a7va1         245 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL  324 (463)
T ss_dssp             SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence            899988875               45555554433333333323333333333223232 22467889999999999999


Q ss_pred             hcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecC----C
Q psy15447        357 SQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNI----S  431 (457)
Q Consensus       357 ~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~----~  431 (457)
                      .+    .|+++... .+++++.+.+.....      ......+.|.+.||.+.....|....+...+.+||..+.    .
T Consensus       325 ~~----~G~~vv~ggTdnHlvlvdl~~~~~------~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG  394 (463)
T d2a7va1         325 LE----RGYSLVSGGTDNHLVLVDLRPKGL------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ  394 (463)
T ss_dssp             HH----TTCEEGGGSCSSSEEEEECTTTTC------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred             Hh----CCCeeecCCCCCceeeeeccccCC------CHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCC
Confidence            99    89988643 567888888754210      344566777788999876555533223335689998753    4


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q psy15447        432 HTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       432 ~t~edi~~~~~~l~~~~~  449 (457)
                      ..++|++++.+.|.+++.
T Consensus       395 ~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         395 FREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             CCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            678999999999988775

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.80  E-value=8.2e-19  Score=170.90  Aligned_cols=278  Identities=11%  Similarity=0.086  Sum_probs=182.1

Q ss_pred             HHHHHHHHHHHhhc---C---CC-cEEEeccc-HHHHHHHHHhh--------cCCCCEEEEeCcccHHHHHHHHhcCCeE
Q psy15447        125 VVHLDLENDIASFM---G---LE-ETALYSFG-FSTSASAIAAY--------VKRNDAVFVDENINFAIQTGLIASRCKV  188 (457)
Q Consensus       125 ~~~~~l~~~la~~~---g---~~-~~i~~~sG-~~a~~~ai~a~--------~~~gd~v~~~~~~h~~~~~~~~~~g~~~  188 (457)
                      .+..+|++.++++.   |   .+ +-|++++| ++++..++.++        ..+||.|++..|+|..+....++.+.+.
T Consensus       100 ~~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~  179 (425)
T d2hoxa1         100 FISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKG  179 (425)
T ss_dssp             TCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTT
T ss_pred             cCCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCC
Confidence            44567888888765   3   22 34555555 58888999888        4688999999999999988888888766


Q ss_pred             EEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCcc
Q psy15447        189 QYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGV  268 (457)
Q Consensus       189 ~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~  268 (457)
                      ..++. |.+.+++.+.           ++++++++.+++||+|.+..       +-.+++.+|.||+|....+.    .+
T Consensus       180 ~~~~~-D~~~~~~~~~-----------~~~~ii~l~sPnNPtG~l~~-------~v~~~~~~I~DEaY~~~~f~----~~  236 (425)
T d2hoxa1         180 YVWAG-NAANYVNVSN-----------PEQYIEMVTSPNNPEGLLRH-------AVIKGCKSIYDMVYYWPHYT----PI  236 (425)
T ss_dssp             EEEEE-EGGGGTTCSC-----------GGGEEEEEESSCTTTCCCCC-------CSSTTCEEEEECTTCSTTTS----CC
T ss_pred             CccCC-CHHHHHhhCC-----------CCceEEEEECCCCCCcchhh-------hhhhCCEEEEeccccCcccc----ch
Confidence            65553 4555543332           45678999999999998742       22368999999998432111    11


Q ss_pred             ccccCCCCCCccEEEecCcccccCcc---cEEEe-cHHHHHHHHhhCCcceecCCCcHHHHHHHHHHHHHHh--------
Q psy15447        269 TEYFGVSTEEVDMIIGSLEHALGSVG---GFCVG-SSYIIEHHRLSGSGYCFSASLPPFLAVAANKALHLLK--------  336 (457)
Q Consensus       269 ~~~~~~~~~~~Di~~~s~sK~lg~~g---G~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~--------  336 (457)
                         ...  .+.+|++.||||.+|.+|   ||+++ ++.+++.+..... +. +.+.+.....+++++++...        
T Consensus       237 ---~~~--~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~~~~-~~-~~~vs~~~Q~aa~~aL~~~~~~~~~~~~  309 (425)
T d2hoxa1         237 ---KYK--ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMT-KN-TEGTPRETQLRSLKVLKEVVAMVKTQKG  309 (425)
T ss_dssp             ---CSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHH-HH-TSSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ---hhh--cCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHHHhhc-cC-cccCCHHHHHHHHHHhhccHHHHHHHHH
Confidence               111  233799999999998766   98655 5666666643321 11 12235555556656554321        


Q ss_pred             hC----cHHHHHHHHHHHHHHHHhhcccccCCeEE--------------eccCCCCeEEEEecCCcchHHHHHHHHHHHH
Q psy15447        337 AN----PSLLTKLREKCNTMHSLLSQHKVTQRFLV--------------QGHRDTPLKYLYLQKSDDEVASKKLLQTICD  398 (457)
Q Consensus       337 ~~----~~~~~~l~~~~~~l~~~L~~~~~~~~~~~--------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  398 (457)
                      ..    +..++.++++.+++.+.|++.   ..+.+              ..++.+.+.|+....+.        ...+.+
T Consensus       310 ~~~~~~~~~~~~l~~r~~~l~~~L~~~---~~~~l~~~p~~~~~~f~~~~~~~~~~f~wl~~~~~~--------~~~~~~  378 (425)
T d2hoxa1         310 TMRDLNTFGFKKLRERWVNITALLDQS---DRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEE--------DKDCYQ  378 (425)
T ss_dssp             STTSHHHHHHHHHHHHHHHHHHHHTTS---SSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGG--------GCSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhc---CCceeeccCCccceeeeeeccCCCcceeeeeCCCCh--------HHHHHH
Confidence            00    234567778888888888872   22221              11233456677665432        123455


Q ss_pred             HHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        399 MCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       399 ~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      .|.++||.++++..+    ..+++++||++.  .+++++++++++|+++++
T Consensus       379 lL~e~gI~v~pGs~F----G~~~~yvRisl~--~~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         379 TFQNGRINTQNGVGF----EASSRYVRLSLI--KTQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             HHHHTTEECEEGGGG----TSCTTEEEEECS--SCHHHHHHHHHHHHHHHT
T ss_pred             HHHhCCEEEEechhc----CCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            677889999987753    234679999975  589999999999999875

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.79  E-value=1.8e-17  Score=159.08  Aligned_cols=337  Identities=14%  Similarity=0.104  Sum_probs=218.5

Q ss_pred             eeeEEee-cCCccCCCCChhhHHHHHHHH-HhcCCCCCCCCCcccChHHHHHHHH----HHHhhcCCC-cE----EEecc
Q psy15447         80 IPCINFA-THNYLSFVENPDIEKCAIDCI-DKNGVGSCGPRGFYGTNVVHLDLEN----DIASFMGLE-ET----ALYSF  148 (457)
Q Consensus        80 ~~~id~~-s~~~l~~~~~p~i~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~-~~----i~~~s  148 (457)
                      +..|++. |-|+    .+|.+.++....+ .+|..++.|.|.+.| .+...++|.    +..++|+.+ ++    +-..|
T Consensus        31 ~~~l~LIaSEN~----~S~~v~~algS~l~nkYaeG~pg~Ryy~G-~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~S  105 (470)
T d1rv3a_          31 RVGLELIASENF----ASRAVLEALGSCLNNKYSLGYPGQRYYGG-TEHIDELETLCQKRALQAYGLDPQCWGVNVQPYS  105 (470)
T ss_dssp             HSSEECCTTCCC----CCHHHHHHHTSGGGTCCCCEETTEESSSC-CHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSS
T ss_pred             HcCceEecCCCc----CCHHHHHHhcchhcccccCCCCCccccCC-chhHHHHHHHHHHHHHHHhCCChhhccccccccC
Confidence            4556664 3333    2588888887777 467777777776544 455555553    346688876 22    34469


Q ss_pred             cHHHHHHHHHhhcCCCCEEEEeCcccHHHHHHH----------HhcCCeEEEecC------CCHHHHHHHHHhhchhccc
Q psy15447        149 GFSTSASAIAAYVKRNDAVFVDENINFAIQTGL----------IASRCKVQYFKH------NNMQHLEELLRQQDERDTL  212 (457)
Q Consensus       149 G~~a~~~ai~a~~~~gd~v~~~~~~h~~~~~~~----------~~~g~~~~~~~~------~d~~~le~~l~~~~~~~~~  212 (457)
                      |+.||.+++.++++|||.|+.-...|+.....-          .....+...++.      -|.+++++..++.+     
T Consensus       106 Gs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~~~~IDyd~l~~~a~~~k-----  180 (470)
T d1rv3a_         106 GSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFH-----  180 (470)
T ss_dssp             HHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHC-----
T ss_pred             CccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecccCcccHHHHHHHHHhhC-----
Confidence            999999999999999999998665544322110          000123444432      28899999988743     


Q ss_pred             CCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccc-c
Q psy15447        213 NSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHAL-G  291 (457)
Q Consensus       213 ~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~l-g  291 (457)
                           +++|++-...  .-...|+++++++|++.|++|++|-+|-.|.+-. |. +..-+    +..|++++|.+|+| |
T Consensus       181 -----PklIi~G~S~--y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~-g~-~~sPl----~~aDvvt~tTHKtlrG  247 (470)
T d1rv3a_         181 -----PKLIIAGTSC--YSRNLDYGRLRKIADENGAYLMADMAHISGLVVA-GV-VPSPF----EHCHVVTTTTHKTLRG  247 (470)
T ss_dssp             -----CSEEEECCSS--CCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH-TS-SCCGG----GTCSEEEEESSGGGCC
T ss_pred             -----cceEeechhh--ccccCCHHHHHHHHhccCCeEEecchhhhhhccc-cc-cCChh----heeeeeeeehhhhccC
Confidence                 3577764322  2235679999999999999999999997665421 11 11111    23599999999999 7


Q ss_pred             CcccEEEecHH---------------HHHHHHhhCCcceecCCCcHHHHHHHHHHHHHH-h-hCcHHHHHHHHHHHHHHH
Q psy15447        292 SVGGFCVGSSY---------------IIEHHRLSGSGYCFSASLPPFLAVAANKALHLL-K-ANPSLLTKLREKCNTMHS  354 (457)
Q Consensus       292 ~~gG~v~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~aaa~a~l~~~-~-~~~~~~~~l~~~~~~l~~  354 (457)
                      +.||.+.++++               +.+.+...-.+...++..+...++.+ .++... . +..+..+++.+|++.|.+
T Consensus       248 PrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~A-va~~ea~~~~fk~Ya~qvv~NAk~La~  326 (470)
T d1rv3a_         248 CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVA-VALKQAMTPEFKEYQRQVVANCRALSA  326 (470)
T ss_dssp             CSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHH-HHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CcceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHH-HHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence            88999887653               55656544333333332233333333 334333 2 224577888999999999


Q ss_pred             HhhcccccCCeEEecc-CCCCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEec----
Q psy15447        355 LLSQHKVTQRFLVQGH-RDTPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCN----  429 (457)
Q Consensus       355 ~L~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~----  429 (457)
                      .|.+    .|+++... .+++++.+.+.... .     ...++.+.|.+.||.+....-|....+...+.+||..+    
T Consensus       327 ~L~~----~G~~v~~ggTdnHlvlvdl~~~g-~-----~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~alTt  396 (470)
T d1rv3a_         327 ALVE----LGYKIVTGGSDNHLILVDLRSKG-T-----DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTS  396 (470)
T ss_dssp             HHHH----TTCEEGGGSCSSSEEEEEGGGGT-C-----CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHH
T ss_pred             HHHh----CCceeccCCCCCceEEEeecccC-C-----cHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeEecCHHHHh
Confidence            9999    89888643 45788888775321 0     23455566777899987555443322333568999875    


Q ss_pred             CCCCHHHHHHHHHHHHHHHHH
Q psy15447        430 ISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       430 ~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ...+++|++++.+.|.++++.
T Consensus       397 rG~~e~dm~~iA~~I~~~l~~  417 (470)
T d1rv3a_         397 RGLLEKDFQKVAHFIHRGIEL  417 (470)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHH
Confidence            457889999999999988753

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.68  E-value=2.8e-16  Score=150.76  Aligned_cols=310  Identities=10%  Similarity=0.018  Sum_probs=174.4

Q ss_pred             ChhhHHHHHHHHHhcCCCCC-----CCCCcccChHHHHHHHHHHHhhcCCCc---EEEecccH-HHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSC-----GPRGFYGTNVVHLDLENDIASFMGLEE---TALYSFGF-STSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~-----~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG~-~a~~~ai~a~~~~gd~  166 (457)
                      .++|++++.+++..|.....     +.|. .-..+...+.++.|+++++.+.   ++++++++ .++++++..+.++++.
T Consensus        15 p~~V~eam~~~~~~~~~~~~~~~~~sHRs-~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~~~~~~   93 (361)
T d2c0ra1          15 PLEVLERAQAEFVDYQHTGMSIMEMSHRG-AVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQT   93 (361)
T ss_dssp             CHHHHHHHHHTSSSSTTSSSCGGGSCTTS-HHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCE
T ss_pred             CHHHHHHHHHHHhhhcccCccccccCcCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhccccCCCc
Confidence            47888888887765431111     1121 1125678889999999999753   45555444 4556666677888887


Q ss_pred             EEEe-CcccHHH-HHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        167 VFVD-ENINFAI-QTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       167 v~~~-~~~h~~~-~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      ++.- ...+... .......+..+......     +++.+++.++.          ..  ++.+   .+.+|.+.|+.++
T Consensus        94 ~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~--~~~v---~~~tg~~~~~~~i  158 (361)
T d2c0ra1          94 ANYVMTGSWASKALKEAKLIGDTHVAASSEASNYMTLPKLQEIQLQ----------DN--AAYL---HLTSNETIEGAQF  158 (361)
T ss_dssp             EEEEECSHHHHHHHHHHHHHSCEEEEEECGGGTTCSCCCGGGCCCC----------TT--EEEE---EEESEETTTTEEC
T ss_pred             eEEEeechhhhhhhhhhhhcCceeeeeccccccccchhhhhhhccc----------Cc--ceEE---EEecccceecceE
Confidence            6543 3333332 23344556666554432     34444433321          12  2222   2456888899999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCccc--EEEecHHHHHH-----------
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVGG--FCVGSSYIIEH-----------  306 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~gG--~v~~~~~~~~~-----------  306 (457)
                      .++|++||+++++|.++++|..           .++.++.|+.+.|.+|.++++||  +++..+.+.+.           
T Consensus       159 ~~~~~~~~al~~vDavss~g~~-----------~id~~~~di~~~s~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T d2c0ra1         159 KAFPDTGSVPLIGDMSSDILSR-----------PFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYD  227 (361)
T ss_dssp             SSCCCCTTSCEEEECTTTTTSS-----------CCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHH
T ss_pred             EEeeccCCceEEEEeecccccc-----------ccccccceeEEEecccccccccCcEEEEEhHHhhhCccccccccccc
Confidence            9999999999999999987643           23334456777789999976542  33333221111           


Q ss_pred             -HHhhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEec--cCCCC-eEEEEe
Q psy15447        307 -HRLSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--HRDTP-LKYLYL  380 (457)
Q Consensus       307 -~~~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~-~~~i~~  380 (457)
                       .....  ..+....++....+..+........  .....+.+++...+........  .......  ...++ ++.+.+
T Consensus       228 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~rS~~~~~~~~  303 (361)
T d2c0ra1         228 TYVKNN--SLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG--GFYRGCVDVDSRSDMNITFRL  303 (361)
T ss_dssp             HHHHTT--TCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST--TSSEESSCGGGBCSSEEEEEC
T ss_pred             cccccc--cccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhcc--cccccCCChhhccceEEEEEC
Confidence             01111  1112222222222222222222222  2233444444545444444311  1111111  11233 455555


Q ss_pred             cCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        381 QKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ++..       ...++.+.|.++||.+..+..+       -+.+||+....+|.|||++++++|++..++
T Consensus       304 ~~~~-------~~~~~~~~L~~~GI~~~~G~~~-------~g~~RIs~~~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         304 ASEE-------LEKEFVKASEQEGFVGLKGHRS-------VGGLRASIYNAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             SCHH-------HHHHHHHHHHHTTEESCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCcc-------cHHHHHHHHHHCCCEEecCCCc-------CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence            5433       5678999999999987765321       124999999999999999999999997654

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.60  E-value=1.9e-15  Score=144.75  Aligned_cols=328  Identities=10%  Similarity=-0.012  Sum_probs=169.4

Q ss_pred             eeeEEeecCCccCCCCChhhHHHHHHHHHhcCCCCC-----CCCCcccChHHHHHHHHHHHhhcCCCc--EEEecccH-H
Q psy15447         80 IPCINFATHNYLSFVENPDIEKCAIDCIDKNGVGSC-----GPRGFYGTNVVHLDLENDIASFMGLEE--TALYSFGF-S  151 (457)
Q Consensus        80 ~~~id~~s~~~l~~~~~p~i~~a~~~~l~~~~~~~~-----~~~~~~g~~~~~~~l~~~la~~~g~~~--~i~~~sG~-~  151 (457)
                      |++.||..+ +..  -+++|.+++.+++..|.....     +.|.. --.+...+.++.|+++++.+.  .+++++|+ +
T Consensus         2 ~~~~nF~pG-P~~--~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~-~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~   77 (360)
T d1w23a_           2 KQVFNFNAG-PSA--LPKPALERAQKELLNFNDTQMSVMELSHRSQ-SYEEVHEQAQNLLRELLQIPNDYQILFLQGGAS   77 (360)
T ss_dssp             CCCEECCSS-SCC--CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH-HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHH
T ss_pred             CceeEeCCC-CcC--CCHHHHHHHHHHHHhhcccCccccccCcCCH-HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHH
Confidence            345566642 212  258899999988765432110     11110 014577889999999999753  56666555 3


Q ss_pred             HH-HHHHHhhcCCCCEEEEeCc-ccHH-HHHHHHhcCCeEEEecCC--CHHHHHHHHHhhchhcccCCCCccEEEEEecC
Q psy15447        152 TS-ASAIAAYVKRNDAVFVDEN-INFA-IQTGLIASRCKVQYFKHN--NMQHLEELLRQQDERDTLNSKVTKKFIIVEGV  226 (457)
Q Consensus       152 a~-~~ai~a~~~~gd~v~~~~~-~h~~-~~~~~~~~g~~~~~~~~~--d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v  226 (457)
                      ++ .++...+.++++.+++-.. .+.. ....+...+.........  +...++..-.. .        .......++  
T Consensus        78 ~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~--  146 (360)
T d1w23a_          78 LQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKANSYQSIPDFSEF-Q--------LNENDAYLH--  146 (360)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGGTSCSCCCGGGC-C--------CCTTEEEEE--
T ss_pred             HHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccccccchhhhhhc-c--------cccccceeE--
Confidence            33 3444455666666655433 3332 223334444333332221  11111111111 0        112244444  


Q ss_pred             CCCCCCCCChHHHHHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC--cccEEEecHHHH
Q psy15447        227 YMNSADICPLKDILSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS--VGGFCVGSSYII  304 (457)
Q Consensus       227 ~~~~G~i~~l~~i~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~--~gG~v~~~~~~~  304 (457)
                       +.+|.+.|+.+|.++|++||+++|+|.++++|...         .+++..++|+.  +++|.+++  .+|++..++...
T Consensus       147 -~~tg~~~~~~~i~~~~~~~g~l~ivDavqs~g~~~---------id~~~~~vd~~--~~~~~k~~~~~~~~~~~~~~~~  214 (360)
T d1w23a_         147 -ITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRP---------LKVNQFGMIYA--GAQKNLGPSGVTVVIVKKDLLN  214 (360)
T ss_dssp             -EESEETTTTEECSSCCCCCSSCEEEECTTTTTSSC---------CCGGGCSEEEE--ETTTTTSCTTCEEEEEEHHHHC
T ss_pred             -ecCCccccceeeeeccccceeeEEeeccccccccc---------cccccccceEE--eeccccccCCcceeeEechhhh
Confidence             35688999999999999999999999999976431         22322344555  66665543  334444443221


Q ss_pred             HHHHh----------hCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEec--c
Q psy15447        305 EHHRL----------SGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQG--H  370 (457)
Q Consensus       305 ~~~~~----------~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~--~  370 (457)
                      +....          ........+...+...+.........+..  ....++.+.+............  .......  .
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  292 (360)
T d1w23a_         215 TKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESN--GFYVGHAEKG  292 (360)
T ss_dssp             SCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTT--TSSEESSCGG
T ss_pred             cccccCCcchhhhhhhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcc--cccccCCChh
Confidence            11100          00001111122222222222222222222  1222233333333333332211  1111111  1


Q ss_pred             CCCC-eEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Q psy15447        371 RDTP-LKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHD  449 (457)
Q Consensus       371 ~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~  449 (457)
                      ..++ ++.+.+++..       ...++.+.|.++||.++.+...       -+.+|+++...+|.||++++++.+++..+
T Consensus       293 ~rS~~vvsf~i~~~~-------~~~~~~~~l~~~GI~~~~G~~~-------~ggiRiS~~~~~t~e~V~~Li~~~~~~~~  358 (360)
T d1w23a_         293 SRSLMNVTFNLRNEE-------LNQQFLAKAKEQGFVGLNGHRS-------VGGCRASIYNAVPIDACIALRELMIQFKE  358 (360)
T ss_dssp             GBCSSEEEEECSSHH-------HHHHHHHHHHHTTEESCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEEEEEcCCCc-------cHHHHHHHHHHCCCeeeeCCCc-------cCcEEEEeeCCCCHHHHHHHHHHHHHHHh
Confidence            2233 5666666543       5668889999999987665321       13599999888899999999999998876


Q ss_pred             H
Q psy15447        450 I  450 (457)
Q Consensus       450 ~  450 (457)
                      .
T Consensus       359 ~  359 (360)
T d1w23a_         359 N  359 (360)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.58  E-value=9.5e-14  Score=133.84  Aligned_cols=293  Identities=16%  Similarity=0.105  Sum_probs=184.4

Q ss_pred             CCCCCCcccChHHHHHHHHHHHhhcCCCcE-EEecccHHHHHHHHH---hhcCCCCEEEEeCcccHHHHH----HHHhcC
Q psy15447        114 SCGPRGFYGTNVVHLDLENDIASFMGLEET-ALYSFGFSTSASAIA---AYVKRNDAVFVDENINFAIQT----GLIASR  185 (457)
Q Consensus       114 ~~~~~~~~g~~~~~~~l~~~la~~~g~~~~-i~~~sG~~a~~~ai~---a~~~~gd~v~~~~~~h~~~~~----~~~~~g  185 (457)
                      +.-+...+|+.+...++++.|++++|.+.+ .-...|++|...++.   ...+ .+.++++...|+.+..    .+...|
T Consensus        97 PyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n~s~~~ga~a~~~~~~~~~~~~~-~~~~~v~~~~~p~~~~v~~t~a~~~g  175 (437)
T d1wyua1          97 PYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETG-RMGVLVSQGVHPEYRAVLRAYLEAVG  175 (437)
T ss_dssp             CCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHT-CCEEEEETTSCHHHHHHHHHHHHHTT
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhCCCccccCchHHHHHHHHHHHHHHhhhc-ccccccccccChHHhhhhhhhcccce
Confidence            333445688899999999999999999865 333455554443332   2333 4456778888876544    345678


Q ss_pred             CeEEEecCCCHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHHHHHHHHcCcEEEEEcCc-ccccccCC
Q psy15447        186 CKVQYFKHNNMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDILSLRSKYQARIFVDESV-SFGTLGST  264 (457)
Q Consensus       186 ~~~~~~~~~d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i~~l~~~~g~~li~DEa~-~~g~~g~~  264 (457)
                      .+++.++.++....   +.+.        .+.+++|++..++ ..|.+.+++++.+++++.|.+++.|..- +.+.+-+ 
T Consensus       176 ~~vv~v~~~~~~~~---~~~~--------~~~~Aavmi~~Pn-t~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~-  242 (437)
T d1wyua1         176 AKLLTLPLEGGRTP---LPEV--------GEEVGAVVVQNPN-FLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKP-  242 (437)
T ss_dssp             CEEEEECCBTTBCC---CCCC--------CTTEEEEEEESSC-TTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCC-
T ss_pred             eeEEeeecccccch---hhhh--------ccceeEEEEcccc-ccccccchHHHHHHhhhccceEEeeechhhhhcccc-
Confidence            89988876532211   1111        1567888888775 5699999999999999999988887532 2222211 


Q ss_pred             CCccccccCCCCCCccEEEecCcccccC------c-ccEEEecHHHHHHHHh----------------------------
Q psy15447        265 GHGVTEYFGVSTEEVDMIIGSLEHALGS------V-GGFCVGSSYIIEHHRL----------------------------  309 (457)
Q Consensus       265 g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~-gG~v~~~~~~~~~~~~----------------------------  309 (457)
                          ...+     ++||++++ +|.||.      + +|++++++++...+..                            
T Consensus       243 ----Pg~~-----GaDi~~g~-~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrR  312 (437)
T d1wyua1         243 ----PGAY-----GADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRR  312 (437)
T ss_dssp             ----HHHH-----TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHG
T ss_pred             ----cccc-----ccceEeec-cceeccccCCCcCccccccccchhhccccccccccccccCCcccceeecccccccccc
Confidence                1123     34899998 887752      2 2788888877655411                            


Q ss_pred             -hCCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-CCeEEEEecCCcc
Q psy15447        310 -SGSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-TPLKYLYLQKSDD  385 (457)
Q Consensus       310 -~~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~  385 (457)
                       .+.+..++  ...+.+..+..-+..+..  ..+..++...++.|+.+.|.+   +.|+....+.. ..-+.+.++.   
T Consensus       313 ekatsnict--~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~---~~g~~~~~~~~~f~ef~v~~~~---  384 (437)
T d1wyua1         313 AKAKSNITT--NAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLE---VPGVRPFTPKPFFNEFALALPK---  384 (437)
T ss_dssp             GGSSCCCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---STTCEECSCSSBCSEEEEECSS---
T ss_pred             cccccchhh--HHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhh---cCCeeccCCCCeeeEEEEECCC---
Confidence             01111111  123222222222222221  234567777899999999988   57877643221 2333344333   


Q ss_pred             hHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHH
Q psy15447        386 EVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSH  448 (457)
Q Consensus       386 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~  448 (457)
                            ...++.++|+++|+......++    ....+.+.++++-..|++|||+++++|++++
T Consensus       385 ------~~~~i~k~L~d~G~~~~~~~~~----~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         385 ------DPEAVRRALAERGFHGATPVPR----EYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             ------CHHHHHHHHHHTTCCCCEECCT----TSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             ------CHHHHHHHHHhCCCCCCccccc----CCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence                  3568999999999965332221    1235789999999999999999999998863

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=2e-14  Score=137.17  Aligned_cols=313  Identities=10%  Similarity=0.011  Sum_probs=173.3

Q ss_pred             ChhhHHHHHHHHHhcCCCCC-----CCCCcccChHHHHHHHHHHHhhcCCCc--E-EEecccH-HHHHHHHHhhcCCCCE
Q psy15447         96 NPDIEKCAIDCIDKNGVGSC-----GPRGFYGTNVVHLDLENDIASFMGLEE--T-ALYSFGF-STSASAIAAYVKRNDA  166 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~-----~~~~~~g~~~~~~~l~~~la~~~g~~~--~-i~~~sG~-~a~~~ai~a~~~~gd~  166 (457)
                      +++|.+|+.+.+..|...+.     +.|.. --.+...+.++.|+++++.+.  . +++++++ .++.+++..+..+++.
T Consensus        13 p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~-ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a~~~~~~~~~~~   91 (360)
T d1bjna_          13 PAEVLKQAQQELRDWNGLGTSVMEVSHRGK-EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTT   91 (360)
T ss_dssp             CHHHHHHHHHTSSSGGGSSSCGGGSCTTSH-HHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCTTCCE
T ss_pred             CHHHHHHHHHHHhhhcccCccccccCcCCH-HHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhhhhhcccccccc
Confidence            48899999988876542111     11110 013567889999999999753  3 4444443 4555666667788887


Q ss_pred             EEEeCcccHHHHH--HHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        167 VFVDENINFAIQT--GLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       167 v~~~~~~h~~~~~--~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      +++....+.....  ..+..+..+......     +.+.+++.+.           ..++++.+....+.+|...+++.+
T Consensus        92 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~v~~~~~~t~~~~~~~~i  160 (360)
T d1bjna_          92 ADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQ-----------LSDNAAYMHYCPNETIDGIAIDET  160 (360)
T ss_dssp             EEEEESSHHHHHHHHHHTTTSEEEEEECEEEETTEEEECCGGGCC-----------CCSSCSCEEECSEETTTTEECCCC
T ss_pred             cceecccchhhhhHHHHhhcCccceeeccccCCCcchhhhhhhhc-----------cCCceeEEEecccccccCccccce
Confidence            7776555444322  223333333322211     1222222221           223343444455677888777655


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccCcc--cEEEecHHHHHHHH---------
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGSVG--GFCVGSSYIIEHHR---------  308 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~~g--G~v~~~~~~~~~~~---------  308 (457)
                        .|+.+++++++|.+++++.           ..++.++.|+.+.|.+|.+++++  ++++.++...+...         
T Consensus       161 --~~~~~~~~v~vDa~~~~~~-----------~~vd~~~~dv~~~ss~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (360)
T d1bjna_         161 --PDFGADVVVAADFSSTILS-----------RPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYS  227 (360)
T ss_dssp             --CCCCTTCCEEEECTTTTTS-----------SCCCGGGCSEEEEETTTTTSSTTCEEEEEEGGGCSCCCTTSCGGGCHH
T ss_pred             --ecccccceeeeeeeccccc-----------eeeeeccceeEEEEcccccccCCCceeEeeehhhhhccccCCcchhhH
Confidence              3577899999999887643           23445667888899999997543  33333322111100         


Q ss_pred             -hhCCcceecCCCcHHHHHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHhhcccccCCeEEecc---CCCCeEEEEecC
Q psy15447        309 -LSGSGYCFSASLPPFLAVAANKALHLLKAN--PSLLTKLREKCNTMHSLLSQHKVTQRFLVQGH---RDTPLKYLYLQK  382 (457)
Q Consensus       309 -~~~~~~~~~~~~~~~~~aaa~a~l~~~~~~--~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~i~~~~  382 (457)
                       .......+..+.++....+....+....+.  ....++.++....+...+..   .....+...   ....++.+.+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~rs~~v~~f~~~~  304 (360)
T d1bjna_         228 ILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDN---SDFYRNDVAKRNRSRMNVPFQLAD  304 (360)
T ss_dssp             HHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH---CSSEECCBCGGGBCSSEEEEEESS
T ss_pred             HHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhc---cccccccCCcccccceEEEEEcCC
Confidence             000011122222333333333333333322  22334444455555555544   222222211   123456677765


Q ss_pred             CcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Q psy15447        383 SDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDI  450 (457)
Q Consensus       383 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~  450 (457)
                      ..       ....+.+.|.++||.+..+...       -+.+|++....+|+|||++++++|++..+.
T Consensus       305 ~~-------~~~~~~~~l~~~Gi~~~~G~~~-------~g~~Ris~~~~~t~edV~~li~~l~e~~~~  358 (360)
T d1bjna_         305 SA-------LDKLFLEESFAAGLHALKGHRV-------VGGMRASIYNAMPLEGVKALTDFMVEFERR  358 (360)
T ss_dssp             GG-------GHHHHHHHHHHTTEECCBCCTT-------TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cc-------cHHHHHHHHHHCCCEeecCCCc-------cCeEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence            54       5567888999999987654311       135999999999999999999999997653

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.40  E-value=4.2e-11  Score=116.60  Aligned_cols=321  Identities=11%  Similarity=0.039  Sum_probs=190.9

Q ss_pred             ChhhHHHHHHHHHhcCCCCCCC-CCcccChHHHHHHHHHHHhhcCCCcEEE-ecccHHHHHH----HHHhhcCC-----C
Q psy15447         96 NPDIEKCAIDCIDKNGVGSCGP-RGFYGTNVVHLDLENDIASFMGLEETAL-YSFGFSTSAS----AIAAYVKR-----N  164 (457)
Q Consensus        96 ~p~i~~a~~~~l~~~~~~~~~~-~~~~g~~~~~~~l~~~la~~~g~~~~i~-~~sG~~a~~~----ai~a~~~~-----g  164 (457)
                      +|.+.+.+.+....|  ++.-+ ...+|+....-+++..+++++|.+-+=. .-.|.+|...    +.+...++     .
T Consensus        78 ~P~v~~~~~~~~TaY--TPYQPaEiSQG~LQalfEfQtmi~eLTGMdvaNaS~yDGatA~aeA~~ma~r~~~~~~~~~~~  155 (471)
T d1wyub1          78 NPKLHEEAARLFADL--HPYQDPRTAQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTR  155 (471)
T ss_dssp             CCHHHHHHHHTTSSC--CTTSCGGGCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CcchhhhHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHhhhccccccc
Confidence            588888776543222  33333 4467888999999999999999985422 2234333222    22211112     2


Q ss_pred             CEEEEeCcccHHHHHHHHhcCCeEEEecCC-----CHHHHHHHHHhhchhcccCCCCccEEEEEecCCCCCCCCCChHHH
Q psy15447        165 DAVFVDENINFAIQTGLIASRCKVQYFKHN-----NMQHLEELLRQQDERDTLNSKVTKKFIIVEGVYMNSADICPLKDI  239 (457)
Q Consensus       165 d~v~~~~~~h~~~~~~~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~~~~~~~~vi~e~v~~~~G~i~~l~~i  239 (457)
                      ..+......|..........+..++.++..     +.+.++....           +.++++++..++..++.....+++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~a~v~v~~p~~~g~~e~~~~~~  224 (471)
T d1wyub1         156 RVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVDLEALKRELG-----------PHVAALMLTNPNTLGLFERRILEI  224 (471)
T ss_dssp             CEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBCHHHHHHHCS-----------TTEEEEEECSSCTTSCCCTTHHHH
T ss_pred             ccccCCcccccceeeeeecccceeecccccccccccchhhhhhhh-----------ccccceeeccCCCcccccchhhhh
Confidence            345555656666555556666666655432     4555544332           456788888777554444568999


Q ss_pred             HHHHHHcCcEEEEEcCcccccccCCCCccccccCCCCCCccEEEecCcccccC------cc-cEEEecHHHHHHHHhh--
Q psy15447        240 LSLRSKYQARIFVDESVSFGTLGSTGHGVTEYFGVSTEEVDMIIGSLEHALGS------VG-GFCVGSSYIIEHHRLS--  310 (457)
Q Consensus       240 ~~l~~~~g~~li~DEa~~~g~~g~~g~~~~~~~~~~~~~~Di~~~s~sK~lg~------~g-G~v~~~~~~~~~~~~~--  310 (457)
                      .+++++.|..+++|-+.-....+...   ...+     ..|+++...++.||.      ++ |+++.+++++..+.-.  
T Consensus       225 ~~~~h~~g~~~~~~~~~~~~~~~l~~---p~~~-----g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~~~R~~PGRiV  296 (471)
T d1wyub1         225 SRLCKEAGVQLYYDGANLNAIMGWAR---PGDM-----GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLV  296 (471)
T ss_dssp             HHHHHHHTCEEEEEGGGGGGTTTTCC---HHHH-----TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEE
T ss_pred             HHHHHhccccccccccchhhhhhccc---cCcc-----cccccccccccccccccccccccccceeehhhhhccCCCcee
Confidence            99999999999998753221121100   0112     236666778887753      22 7888888877655200  


Q ss_pred             ---------------CCcceecCCCcHHHHHHHHHHHHHHhh--CcHHHHHHHHHHHHHHHHhhcccccCCeEEeccCC-
Q psy15447        311 ---------------GSGYCFSASLPPFLAVAANKALHLLKA--NPSLLTKLREKCNTMHSLLSQHKVTQRFLVQGHRD-  372 (457)
Q Consensus       311 ---------------~~~~~~~~~~~~~~~aaa~a~l~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~~~~~-  372 (457)
                                     ..+-....+.+.+.+.++..-+..+..  ..++.++...++.|+.+.|+.    +|+++..+.. 
T Consensus       297 ~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~----~G~~~~~~~~f  372 (471)
T d1wyub1         297 ERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE----KGYRVPYDGPS  372 (471)
T ss_dssp             EECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTCBCSSCSSC
T ss_pred             cCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhh----cCceeccCcce
Confidence                           000001112223322222222333322  245677888899999999977    7887643221 


Q ss_pred             CCeEEEEecCCcchHHHHHHHHHHHHHHHHcCeeEeccccCccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHhc
Q psy15447        373 TPLKYLYLQKSDDEVASKKLLQTICDMCIQAGFAITCPSHLDQEAKKQKPSIRITCNISHTEQDMNSLIETLCKSHDIAV  452 (457)
Q Consensus       373 ~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~~~  452 (457)
                      ..-+.+..+.+.       ...++.++|+++|++-....||    ....+.+.++++-.+|++|||+++++|++++++.+
T Consensus       373 f~EFvv~~~~~~-------~~~~i~k~L~~~G~~~~~~~~p----~~~~~~llv~vTE~~tkedID~lv~aL~~i~~e~~  441 (471)
T d1wyub1         373 MHEFVAQPPEGF-------RALDLAKGLLELGFHPPTVYFP----LIVKEALMVEPTETEAKETLEAFAEAMGALLKKPK  441 (471)
T ss_dssp             CSCEEEBCSTTC-------CHHHHHHHHHHTTCCCCEESCS----TTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTSCH
T ss_pred             eeEEeecCCCCC-------CHHHHHHHHHHcCCCCCcccCc----CCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHhhH
Confidence            122333333332       3457899999999865333332    12367899999999999999999999999988653