Psyllid ID: psy15533
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 387 | ||||||
| 270014766 | 1032 | hypothetical protein TcasGA2_TC005178 [T | 0.684 | 0.256 | 0.686 | 1e-115 | |
| 328719205 | 1111 | PREDICTED: solute carrier family 12 memb | 0.684 | 0.238 | 0.650 | 1e-115 | |
| 242008234 | 1034 | conserved hypothetical protein [Pediculu | 0.684 | 0.256 | 0.686 | 1e-113 | |
| 328719207 | 1130 | PREDICTED: solute carrier family 12 memb | 0.684 | 0.234 | 0.613 | 1e-112 | |
| 157130548 | 1043 | potassium/chloride symporter, putative [ | 0.682 | 0.253 | 0.684 | 1e-111 | |
| 118789729 | 898 | AGAP011498-PA [Anopheles gambiae str. PE | 0.692 | 0.298 | 0.682 | 1e-111 | |
| 195431527 | 1067 | GK15715 [Drosophila willistoni] gi|19415 | 0.682 | 0.247 | 0.644 | 1e-102 | |
| 195489378 | 1074 | GE14341 [Drosophila yakuba] gi|194178814 | 0.682 | 0.245 | 0.644 | 1e-102 | |
| 195347267 | 1074 | GM16063 [Drosophila sechellia] gi|194135 | 0.682 | 0.245 | 0.644 | 1e-102 | |
| 194885814 | 1074 | GG22903 [Drosophila erecta] gi|190659683 | 0.682 | 0.245 | 0.644 | 1e-102 |
| >gi|270014766|gb|EFA11214.1| hypothetical protein TcasGA2_TC005178 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/322 (68%), Positives = 243/322 (75%), Gaps = 57/322 (17%)
Query: 32 VQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFPDT 91
VQT+GLGGMKPNTVILGWPY WRQS+D RTW+VFL TVR V+AA MALLVPKGINFFPD+
Sbjct: 700 VQTSGLGGMKPNTVILGWPYGWRQSEDERTWQVFLQTVRNVTAAHMALLVPKGINFFPDS 759
Query: 92 SVKIVGTIDVWWIVHDGGLLMLLPFLLRQHRTWKNCKLRIFTVAQMEDNSIQMKKDLKTF 151
+ K+ G ID+WWIVHDGGLLMLLPFLL+QHRTWKNCK+RIFTVAQMEDNSIQMKKDLKTF
Sbjct: 760 TEKVFGNIDIWWIVHDGGLLMLLPFLLKQHRTWKNCKMRIFTVAQMEDNSIQMKKDLKTF 819
Query: 152 LYHLRIEAEVEVVEMTNNDISAYTYERTLMMEQRNQMLRELRLNKKESLGMVQAIVDQHH 211
LYHLRIEAEVEVVEM ++DISAYTYERTLMMEQRNQMLRELRLNKKESLG+VQ+IVDQHH
Sbjct: 820 LYHLRIEAEVEVVEMMDSDISAYTYERTLMMEQRNQMLRELRLNKKESLGVVQSIVDQHH 879
Query: 212 --------------------DTNKGVTKSQTKTRMNPEEID------------------- 232
D + +++ PE+ D
Sbjct: 880 QNIDAKTATKVRFQEPSAEGDKDNKAAETEPTNETKPEDNDNSTTEKEDPSEKECNEETK 939
Query: 233 ------------------EGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIER 274
EGNVRRMHTAVKLNEVIVN+SHEAQLVILNLPGPPK+T +ER
Sbjct: 940 ENNISSEEKKKPATITPDEGNVRRMHTAVKLNEVIVNRSHEAQLVILNLPGPPKDTKMER 999
Query: 275 ESNYMEFLEVLTEGLERVLMVR 296
ESNYMEFLEVLTEGLERVLMVR
Sbjct: 1000 ESNYMEFLEVLTEGLERVLMVR 1021
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328719205|ref|XP_001944309.2| PREDICTED: solute carrier family 12 member 6-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|242008234|ref|XP_002424915.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508503|gb|EEB12177.1| conserved hypothetical protein [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|328719207|ref|XP_003246696.1| PREDICTED: solute carrier family 12 member 6-like isoform 2 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|157130548|ref|XP_001655744.1| potassium/chloride symporter, putative [Aedes aegypti] gi|108871879|gb|EAT36104.1| AAEL011792-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|118789729|ref|XP_317803.3| AGAP011498-PA [Anopheles gambiae str. PEST] gi|116122711|gb|EAA13082.4| AGAP011498-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|195431527|ref|XP_002063789.1| GK15715 [Drosophila willistoni] gi|194159874|gb|EDW74775.1| GK15715 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
| >gi|195489378|ref|XP_002092713.1| GE14341 [Drosophila yakuba] gi|194178814|gb|EDW92425.1| GE14341 [Drosophila yakuba] | Back alignment and taxonomy information |
|---|
| >gi|195347267|ref|XP_002040175.1| GM16063 [Drosophila sechellia] gi|194135524|gb|EDW57040.1| GM16063 [Drosophila sechellia] | Back alignment and taxonomy information |
|---|
| >gi|194885814|ref|XP_001976496.1| GG22903 [Drosophila erecta] gi|190659683|gb|EDV56896.1| GG22903 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 387 | ||||||
| UNIPROTKB|E1BZK3 | 1094 | SLC12A4 "Uncharacterized prote | 0.462 | 0.163 | 0.638 | 8.3e-84 | |
| UNIPROTKB|E1BCI8 | 1086 | SLC12A4 "Uncharacterized prote | 0.472 | 0.168 | 0.625 | 1.3e-83 | |
| RGD|3687 | 1085 | Slc12a4 "solute carrier family | 0.472 | 0.168 | 0.625 | 2.2e-83 | |
| UNIPROTKB|Q63632 | 1085 | Slc12a4 "Solute carrier family | 0.472 | 0.168 | 0.625 | 2.2e-83 | |
| MGI|MGI:1309465 | 1085 | Slc12a4 "solute carrier family | 0.472 | 0.168 | 0.625 | 2.2e-83 | |
| UNIPROTKB|J9P6S2 | 1083 | SLC12A4 "Uncharacterized prote | 0.472 | 0.168 | 0.619 | 2.7e-83 | |
| UNIPROTKB|Q5KU49 | 1086 | SLC12A4 "K-Cl cotransporter" [ | 0.472 | 0.168 | 0.619 | 2.8e-83 | |
| UNIPROTKB|I3L4N6 | 1037 | SLC12A4 "Solute carrier family | 0.472 | 0.176 | 0.619 | 3.7e-83 | |
| UNIPROTKB|Q9UP95 | 1085 | SLC12A4 "Solute carrier family | 0.472 | 0.168 | 0.619 | 5.7e-83 | |
| UNIPROTKB|F5H3C0 | 1087 | SLC12A4 "Solute carrier family | 0.472 | 0.168 | 0.619 | 5.8e-83 |
| UNIPROTKB|E1BZK3 SLC12A4 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 622 (224.0 bits), Expect = 8.3e-84, Sum P(2) = 8.3e-84
Identities = 115/180 (63%), Positives = 139/180 (77%)
Query: 32 VQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFPDT 91
+Q+ GLGGMK NTV+LGWPY WRQS+D R+W+ F+ TVR +AA +ALLVPK ++F+P
Sbjct: 787 IQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSN 846
Query: 92 SVKI-VGTIDVWWIVHDGGXXXXXXXXXRQHRTWKNCKLRIFTVAQMEDNSIQMKKDLKT 150
+ G IDVWWIVHDGG +QH+ W+ CK+RIFTVAQM+DNSIQMKKDL T
Sbjct: 847 HERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLAT 906
Query: 151 FLYHLRIEAEVEVVEMTNNDISAYTYERTLMMEQRNQMLRELRLNKKESLGMVQAIVDQH 210
FLY LRIEAEVEVVEM N+DISAYTYERTLMMEQR+QMLR++RL K E Q + D+H
Sbjct: 907 FLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRH 966
|
|
| UNIPROTKB|E1BCI8 SLC12A4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|3687 Slc12a4 "solute carrier family 12 (potassium/chloride transporters), member 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q63632 Slc12a4 "Solute carrier family 12 member 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1309465 Slc12a4 "solute carrier family 12, member 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P6S2 SLC12A4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5KU49 SLC12A4 "K-Cl cotransporter" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3L4N6 SLC12A4 "Solute carrier family 12 member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9UP95 SLC12A4 "Solute carrier family 12 member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F5H3C0 SLC12A4 "Solute carrier family 12 member 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 387 | |||
| TIGR00930 | 953 | TIGR00930, 2a30, K-Cl cotransporter | 5e-90 | |
| TIGR00930 | 953 | TIGR00930, 2a30, K-Cl cotransporter | 3e-36 | |
| pfam10146 | 215 | pfam10146, zf-C4H2, Zinc finger-containing protein | 0.002 |
| >gnl|CDD|233194 TIGR00930, 2a30, K-Cl cotransporter | Back alignment and domain information |
|---|
Score = 290 bits (744), Expect = 5e-90
Identities = 108/304 (35%), Positives = 154/304 (50%), Gaps = 58/304 (19%)
Query: 32 VQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFP-- 89
+Q +GLG MKPNT+++G+ WRQ++ R WE ++ + A +A++V + P
Sbjct: 658 IQASGLGRMKPNTLVMGYKKDWRQAE-PRAWETYIGIIHDAFDAHLAVVVVRNSEGLPIS 716
Query: 90 ------------------DTSVKIV-------------------GTIDVWWIVHDGGLLM 112
KI GTIDVWW+V DGGL +
Sbjct: 717 VLQVQEELENDCSEDSIELNDGKISTQPDMHLEASTQFQKKQGKGTIDVWWLVDDGGLTL 776
Query: 113 LLPFLLRQHRTWKNCKLRIFTVAQMEDNSIQMKKDLKTFLYHLRIEAEVEVVEMTNNDIS 172
LLP+LL + WK CK+RIF AQ +D S Q KKD+ T LY RI+AEV VV M DI+
Sbjct: 777 LLPYLLTTKKVWKKCKIRIFVGAQKDDRSEQEKKDMATLLYKFRIDAEVIVVLM---DIN 833
Query: 173 AYTYERTLMMEQRNQMLRELRLNKKESLGMVQAIVDQHHDTNKGVTKSQTKTRMNPEEID 232
A +T ME +M+R RL+K E + D K ++ E+
Sbjct: 834 A--KPQTESMEAFEEMIRPFRLHKTE---KDREAKDPKMTWTKPW-------KITDAEL- 880
Query: 233 EGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERV 292
+ NVR+ + V+LNE+++ S +A LV+L+LP P K + YM +LEVL+E L V
Sbjct: 881 QSNVRKSYRQVRLNELLLEYSRDAALVVLSLPVPRK--GSIPDELYMAWLEVLSEDLPPV 938
Query: 293 LMVR 296
L+VR
Sbjct: 939 LLVR 942
|
[Transport and binding proteins, Other]. Length = 953 |
| >gnl|CDD|233194 TIGR00930, 2a30, K-Cl cotransporter | Back alignment and domain information |
|---|
| >gnl|CDD|204405 pfam10146, zf-C4H2, Zinc finger-containing protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 387 | |||
| KOG2082|consensus | 1075 | 100.0 | ||
| TIGR00930 | 953 | 2a30 K-Cl cotransporter. | 100.0 | |
| KOG1288|consensus | 945 | 100.0 | ||
| TIGR00930 | 953 | 2a30 K-Cl cotransporter. | 99.89 | |
| KOG2082|consensus | 1075 | 99.8 | ||
| KOG1288|consensus | 945 | 99.63 | ||
| KOG2083|consensus | 643 | 98.15 |
| >KOG2082|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-56 Score=459.62 Aligned_cols=286 Identities=58% Similarity=0.946 Sum_probs=258.6
Q ss_pred hhccceeeech--HHHHHHHHHhcCCCCCCccEEEEccCCCCCcCCCchhHHHHHHHHHHHHhcccceeeccccccCCCC
Q psy15533 14 LLNWNEFFLFP--ISLLCFSVQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFPDT 91 (387)
Q Consensus 14 ~~~~~~~~v~p--~~G~~~Llq~sGLG~lkPNTvvlg~~~~w~~~~~~~~~~~~~~~l~da~~~~~~v~l~k~~~~f~~~ 91 (387)
+++|..++|++ ++|+++|+|+.|||+||||||++|||..|++.+++..+..|+++++++...+.++++.||++.||.+
T Consensus 750 ~~Gf~q~vv~~~ir~g~s~liQs~GlGglkpNtvl~~wP~~wr~e~~~~~~~tFi~~v~~~~a~~~al~v~K~i~~fP~~ 829 (1075)
T KOG2082|consen 750 VKGFAQTVVASNLREGISHLIQSCGLGGLKPNTVLMGWPEGWRQEEDPREWKTFIETVRDTTAAHLALLVAKGIDDFPSN 829 (1075)
T ss_pred hhhhhhhhcccchhhhhhhceeeccccCccCceEEEeCcchhcccccchHHHHHHHHHHHhhccceeEEEecCcccCchh
Confidence 67899999999 4999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCccceeEEeeeecCChhHhHHHHHHhcCCCCCCceEEEEEeecCcccHHHHHHHHHHHHHhcccccEEEEEEccCCCc
Q psy15533 92 SVKIVGTIDVWWIVHDGGLLMLLPFLLRQHRTWKNCKLRIFTVAQMEDNSIQMKKDLKTFLYHLRIEAEVEVVEMTNNDI 171 (387)
Q Consensus 92 ~~~~~~~IDVWWl~~dGgL~LlLa~lL~~~~~Wr~~klRVf~~~~~~~~~~~~~~~l~~lL~~lRI~Aev~vv~~~~~~i 171 (387)
.+++.|+|||||+.+|||++|+++|+|++|+.||+|++|+|.+++.+++..++|++++++|+++||+|++.||++.+.||
T Consensus 830 ~er~~G~IDvwWIVhDGG~lmLl~~LL~qhkvwr~C~~rif~vaq~~dns~~mk~dl~~flY~LRi~Aev~vVem~~~di 909 (1075)
T KOG2082|consen 830 VERFSGHIDVWWIVHDGGMLMLLPFLLRQHKVWRKCKMRIFTVAQEDDNSIQMKKDLQKFLYHLRIDAEVEVVEMHDSDI 909 (1075)
T ss_pred hhhhcCceeEEEEEecCchHHHHHHHHHHHHHHhhceeeEEEEeeccCcHHHHHHHHHHHHHhhcccceEEEEEecchhh
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHhHhHHHHHHHHHHhhhccccccchhhhhhccccCC---------------------------------CCCcc
Q psy15533 172 SAYTYERTLMMEQRNQMLRELRLNKKESLGMVQAIVDQHHDT---------------------------------NKGVT 218 (387)
Q Consensus 172 ~~~~~~~t~~~~~~~~~~~~~~l~~~~~~~~~~~i~d~~~~~---------------------------------~~~~~ 218 (387)
+++++++++.+++|.++++++++++.++++ ++.++|++... ..++.
T Consensus 910 s~~~~ertl~mE~rsq~~~~m~~~k~~~~r-~~l~~d~~~~~~~~s~~s~~~~~~~~~~~~~~~~~t~~k~~~~~~~~~~ 988 (1075)
T KOG2082|consen 910 SAYTYERTLMMEQRSQMLRQMRLSKNERER-AQLIHDRNAPRRPSSLHSDEARPFETAPTKVQMTWTRDKYMASTSNPAF 988 (1075)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhhhhhhhc-cccchhcCCccccccccccccccCCCCCcceechhhhhhHHHhccCCcc
Confidence 999999999999999999999988776654 34444443210 01112
Q ss_pred cccccccCCccccccccchhhhhhhhHHHHHHhcCcccceEEecCCCCCCCCCchhhhhHHHHHHHHHhcCceEEEeccc
Q psy15533 219 KSQTKTRMNPEEIDEGNVRRMHTAVKLNEVIVNKSHEAQLVILNLPGPPKETNIERESNYMEFLEVLTEGLERVLMVREE 298 (387)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~rlnelI~~~S~~A~LV~l~LP~p~~~~~~~~~~eY~~~L~~l~~~l~~vlLVrg~ 298 (387)
..++.++.+..+|+++|++|+|+++|||++|++||.+|+||+++||.||++.+..+. ||++++.+++++++|++|||.
T Consensus 989 ~~~~~k~~~~~~~~~snv~~mhTavkLN~vi~~~S~~a~lvLlnlP~PP~n~~~~~~--Ymeylevlte~l~Rvl~VrG~ 1066 (1075)
T KOG2082|consen 989 SLSGFKDLFSMKPDQSNVRRMHTAVKLNEVILNKSRDAQLVLLNLPGPPRNRQGDEN--YMEYLEVLTEGLPRVLLVRGG 1066 (1075)
T ss_pred hhccCCcccccChhhHHHHHHHHHHHHHHHHHhcCccccEEEecCcCCCCCCcchhh--HHHHHHHHHcCCCeEEEEccC
Confidence 334556666678899999999999999999999999999999999999999877766 999999999999999999999
Q ss_pred cccc
Q psy15533 299 KWTS 302 (387)
Q Consensus 299 ~~~~ 302 (387)
++++
T Consensus 1067 greV 1070 (1075)
T KOG2082|consen 1067 GREV 1070 (1075)
T ss_pred CceE
Confidence 8765
|
|
| >TIGR00930 2a30 K-Cl cotransporter | Back alignment and domain information |
|---|
| >KOG1288|consensus | Back alignment and domain information |
|---|
| >TIGR00930 2a30 K-Cl cotransporter | Back alignment and domain information |
|---|
| >KOG2082|consensus | Back alignment and domain information |
|---|
| >KOG1288|consensus | Back alignment and domain information |
|---|
| >KOG2083|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 387 | |||
| 3g40_A | 294 | Na-K-CL cotransporter; alpha/beta fold 10-stranded | 2e-18 | |
| 3g40_A | 294 | Na-K-CL cotransporter; alpha/beta fold 10-stranded | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Length = 294 | Back alignment and structure |
|---|
Score = 84.1 bits (207), Expect = 2e-18
Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 19/160 (11%)
Query: 32 VQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFPDT 91
++ +P+ + L P + + E +R S +M +L+ + P
Sbjct: 100 MEALTGSFFRPSILFLRLPENRDR------DEEIREIIRKASMYRMGVLL---FSKHPQA 150
Query: 92 SVKIVGTIDVWWI---------VHDGGLLMLLPFLLRQHRTWKNCKLRIFTVAQMEDNSI 142
+ I++W + G + + L + WK L T A +
Sbjct: 151 GLGRQNLINLWIENRGLDWDISMELGNMDLALLIAYKLKSNWKA-SLSFMTFAPTAIQAQ 209
Query: 143 QMKKDLKTFLYHLRIEAEVEVVEMTNNDISAYTYERTLMM 182
+ L++ RI V N S+ +L +
Sbjct: 210 AAENFLQSLAELARIPNVKMQVLRENPIKSSKLPFASLHI 249
|
| >3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Length = 294 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 387 | |||
| 3g40_A | 294 | Na-K-CL cotransporter; alpha/beta fold 10-stranded | 99.95 | |
| 3g40_A | 294 | Na-K-CL cotransporter; alpha/beta fold 10-stranded | 99.66 |
| >3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=230.56 Aligned_cols=140 Identities=17% Similarity=0.240 Sum_probs=116.9
Q ss_pred hhhccceeeechH--HHHHHHHHhcCCCCCCccEEEEccCCCCCcCCCchhHHHHHHHHHHHHhcccceeeccccccCCC
Q psy15533 13 CLLNWNEFFLFPI--SLLCFSVQTTGLGGMKPNTVILGWPYSWRQSDDLRTWEVFLNTVRVVSAAKMALLVPKGINFFPD 90 (387)
Q Consensus 13 ~~~~~~~~~v~p~--~G~~~Llq~sGLG~lkPNTvvlg~~~~w~~~~~~~~~~~~~~~l~da~~~~~~v~l~k~~~~f~~ 90 (387)
++..|..++.||. +|+.+++|++|+|+++||||+|||++ +++...+|+++|+.+..+++||++.+.- |.
T Consensus 79 ~v~a~~~vi~a~d~~~G~~~lvq~yglg~l~PNTilLg~~~------~~e~~~~y~~~i~~~~~~~~nVlil~~~---~~ 149 (294)
T 3g40_A 79 GVFSSWTIIDTAEFEENLVVGMEALTGSFFRPSILFLRLPE------NRDRDEEIREIIRKASMYRMGVLLFSKH---PQ 149 (294)
T ss_dssp TCEEEEEEC-----CHHHHHHHHHHTTCSSCSCEEEEECCS------SGGGHHHHHHHHHHHHHTTCEEEEEECC---TT
T ss_pred CceeEEEEEecCChhHHHHHHHHHcCCCCCCCCEEEeCCCC------ChhhhHHHHHHHHHHHHhCceEEEEecC---Cc
Confidence 4556788899885 99999999999999999999999995 4567789999999999999999998632 11
Q ss_pred CCCCccceeEEe-------ee----ecCChhHhHHHHHHhcCCCCCCceEEEEEeecCcccHHHHHHHHHHHHHhccccc
Q psy15533 91 TSVKIVGTIDVW-------WI----VHDGGLLMLLPFLLRQHRTWKNCKLRIFTVAQMEDNSIQMKKDLKTFLYHLRIEA 159 (387)
Q Consensus 91 ~~~~~~~~IDVW-------Wl----~~dGgL~LlLa~lL~~~~~Wr~~klRVf~~~~~~~~~~~~~~~l~~lL~~lRI~A 159 (387)
......++|||| |- ..||+||++|||+|+++ | +++||+.+|+++++..+++++.|++|++.+||.|
T Consensus 150 ~~fg~~~~IdvW~~~~~~~W~~g~~~~Ng~LmlllAylL~~n--W-~A~I~L~~vV~de~a~~~a~~~l~~Lv~~~Ri~a 226 (294)
T 3g40_A 150 AGLGRQNLINLWIENRGLDWDISMELGNMDLALLIAYKLKSN--W-KASLSFMTFAPTAIQAQAAENFLQSLAELARIPN 226 (294)
T ss_dssp TTTTTSCEEEEECCCC---CCCCSCCCTTHHHHHHHHHHHHH--H-TCEEEEEEECSSHHHHHHHHHHHHHHHHHHTCCS
T ss_pred cCCCCCceEEEecCCCCCcccccccccchhHHHHHHHHHhhC--c-CCeEEEEEecCCHHHHHHHHHHHHHHHHHhcCCc
Confidence 111223789999 72 46899999999999886 8 9999999999988888999999999999999999
Q ss_pred EEEEE
Q psy15533 160 EVEVV 164 (387)
Q Consensus 160 ev~vv 164 (387)
++.||
T Consensus 227 ~~~vv 231 (294)
T 3g40_A 227 VKMQV 231 (294)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 98776
|
| >3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00