Psyllid ID: psy15542

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
MPSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEELS
ccEEEEEEccccHHHHHHHHHHHcccccEEHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHccEEcccccHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHccccccEEEccccEEEcccccccccEEEEEEEccccEEEEccccccccccccEEEEEEEEccccccccccc
cccEEEEcccHHHcccHHHccccccccccHHHHHHHHHHHHcccccHEEEcccccHHHHHHHHHEEcccccEEEEEccEEHHcccccccccEEEEEccccHHHHHHHHHcccEEEEEEcccEEEEccccccccEEEEEEEEccccEEEEcccccccccccccEEEEEEccccccHEHccc
MPSSILILSYLSSLFSQTIQdrasgqdaDLLALSISWRnkispildvltdeasDGELAALISYAIAFPDGFMALVDTydvkrynipwfAELQIVASNDINEETILSLneqghridcfgigthlvtcqrqpalgcvyklveingmpriklsqdvgkvAVSDHLYSFIHELwlqnapieels
MPSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIhelwlqnapieels
MPssililsylsslfsQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEELS
****ILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNA******
MPSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQ*****AVSDHLYSFIHELWLQN**IE***
MPSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEELS
*PSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEELS
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPSSILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDGFMALVDTYDVKRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIHELWLQNAPIEELS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query180 2.2.26 [Sep-21-2011]
Q9VQX4 555 Nicotinate phosphoribosyl yes N/A 0.855 0.277 0.527 3e-51
Q95XX1 562 Nicotinate phosphoribosyl yes N/A 0.85 0.272 0.397 2e-33
Q55G10 589 Nicotinate phosphoribosyl yes N/A 0.766 0.234 0.390 7e-30
Q6P3H4 546 Nicotinate phosphoribosyl yes N/A 0.85 0.280 0.335 9e-27
A5PK51538 Nicotinate phosphoribosyl yes N/A 0.783 0.262 0.313 8e-24
Q8CC86538 Nicotinate phosphoribosyl yes N/A 0.794 0.265 0.294 2e-22
Q6XQN6538 Nicotinate phosphoribosyl yes N/A 0.783 0.262 0.308 1e-21
Q6XQN1538 Nicotinate phosphoribosyl yes N/A 0.794 0.265 0.289 2e-20
O32090 490 Nicotinate phosphoribosyl yes N/A 0.394 0.144 0.453 5e-11
O53770463 Nicotinate phosphoribosyl yes N/A 0.572 0.222 0.305 1e-06
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2 Back     alignment and function desciption
 Score =  200 bits (509), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 106/201 (52%), Positives = 127/201 (63%), Gaps = 47/201 (23%)

Query: 5   ILILSYLSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYA 64
           I   S +  L ++ I+ + +G   DLL  ++  R  +S +LDV T+E+S+GELAA++SYA
Sbjct: 228 ITSFSSIGELKTRLIKHKQTGILEDLLEHAVRHRALLSHLLDVSTEESSEGELAAMVSYA 287

Query: 65  IAFPDGFMALVDTYDVKR------------------------------------------ 82
           IAFPDGFMALVDTYDVKR                                          
Sbjct: 288 IAFPDGFMALVDTYDVKRSGLLNFSAVALALNDLGYHALGIRIDSGDLAYLSCLARETFE 347

Query: 83  -----YNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYK 137
                + +PWF +L IVASNDINE+TILSLNEQGH+IDCFGIGTHLVTCQRQPALGCVYK
Sbjct: 348 KVAERFKVPWFNKLTIVASNDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYK 407

Query: 138 LVEINGMPRIKLSQDVGKVAV 158
           LVEING PRIKLSQDV KV +
Sbjct: 408 LVEINGQPRIKLSQDVEKVTM 428
Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 1
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=3 Back     alignment and function description
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum GN=naprt PE=2 SV=1 Back     alignment and function description
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2 SV=2 Back     alignment and function description
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2 SV=2 Back     alignment and function description
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2 SV=1 Back     alignment and function description
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1 SV=2 Back     alignment and function description
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1 PE=2 SV=1 Back     alignment and function description
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain 168) GN=pncB PE=3 SV=1 Back     alignment and function description
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium tuberculosis GN=pncB2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query180
189233641 550 PREDICTED: similar to CG3714 CG3714-PA [ 0.822 0.269 0.553 2e-53
242018851 563 nicotinate phosphoribosyltransferase, pu 0.833 0.266 0.546 1e-51
289741281 556 nicotinic acid phosphoribosyltransferase 0.872 0.282 0.524 2e-51
118788703 519 AGAP008516-PA [Anopheles gambiae str. PE 0.822 0.285 0.533 7e-51
24581587 555 CG3714, isoform A [Drosophila melanogast 0.855 0.277 0.527 2e-49
340719439 548 PREDICTED: nicotinate phosphoribosyltran 0.866 0.284 0.527 4e-49
193662093 550 PREDICTED: nicotinate phosphoribosyltran 0.855 0.28 0.502 1e-47
442625826 550 CG3714, isoform G [Drosophila melanogast 0.855 0.28 0.520 2e-47
383862725 548 PREDICTED: nicotinate phosphoribosyltran 0.866 0.284 0.512 7e-47
66534424 549 PREDICTED: nicotinate phosphoribosyltran 0.861 0.282 0.5 2e-46
>gi|189233641|ref|XP_001814986.1| PREDICTED: similar to CG3714 CG3714-PA [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/195 (55%), Positives = 126/195 (64%), Gaps = 47/195 (24%)

Query: 11  LSSLFSQTIQDRASGQDADLLALSISWRNKISPILDVLTDEASDGELAALISYAIAFPDG 70
            + L +  ++ +   +  DLL L++SWR K+ PI  V+  EASDGELAALIS+AIAFPDG
Sbjct: 229 FTDLRNTMLEPKDGAEPRDLLQLALSWRTKLVPIFKVVASEASDGELAALISFAIAFPDG 288

Query: 71  FMALVDTYDVKR-----------------------------------------------Y 83
           FMALVDTYDVKR                                               +
Sbjct: 289 FMALVDTYDVKRSGLLNFCSVALALNDLGYRAVGIRLDSGDLAYLSNVARQFFCEISDKF 348

Query: 84  NIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEING 143
           NIPWF +L I+ASNDINEETILSLNEQGH+I+CFGIGTHLVTCQRQPALGCVYKLVE+NG
Sbjct: 349 NIPWFEDLMIMASNDINEETILSLNEQGHKINCFGIGTHLVTCQRQPALGCVYKLVELNG 408

Query: 144 MPRIKLSQDVGKVAV 158
            PRIKLSQDVGKV +
Sbjct: 409 QPRIKLSQDVGKVTM 423

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|242018851|ref|XP_002429884.1| nicotinate phosphoribosyltransferase, putative [Pediculus humanus corporis] gi|212514918|gb|EEB17146.1| nicotinate phosphoribosyltransferase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|289741281|gb|ADD19388.1| nicotinic acid phosphoribosyltransferase [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|118788703|ref|XP_316922.3| AGAP008516-PA [Anopheles gambiae str. PEST] gi|37787323|gb|AAP69612.1| nicotinate phosphoribosyltransferase-like protein [Anopheles gambiae] gi|116122873|gb|EAA43816.3| AGAP008516-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|24581587|ref|NP_722961.1| CG3714, isoform A [Drosophila melanogaster] gi|74870475|sp|Q9VQX4.2|PNCB_DROME RecName: Full=Nicotinate phosphoribosyltransferase; Short=NAPRTase gi|22953822|gb|AAF51037.2| CG3714, isoform A [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|340719439|ref|XP_003398161.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Bombus terrestris] gi|350410409|ref|XP_003489036.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|193662093|ref|XP_001947591.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|442625826|ref|NP_001260015.1| CG3714, isoform G [Drosophila melanogaster] gi|440213297|gb|AGB92551.1| CG3714, isoform G [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|383862725|ref|XP_003706834.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Megachile rotundata] Back     alignment and taxonomy information
>gi|66534424|ref|XP_623279.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 1 [Apis mellifera] gi|380029686|ref|XP_003698498.1| PREDICTED: nicotinate phosphoribosyltransferase-like isoform 2 [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query180
WB|WBGene00021882 562 Y54G2A.17 [Caenorhabditis eleg 0.4 0.128 0.680 2.5e-42
UNIPROTKB|Q95XX1 562 Y54G2A.17 "Nicotinate phosphor 0.4 0.128 0.680 2.5e-42
DICTYBASE|DDB_G0268472 589 naprt "nicotinate phosphoribos 0.433 0.132 0.653 3.4e-36
FB|FBgn0031589 555 CG3714 [Drosophila melanogaste 0.461 0.149 0.776 3.9e-32
ZFIN|ZDB-GENE-040426-1897 548 naprt1 "nicotinate phosphoribo 0.416 0.136 0.546 1.1e-27
UNIPROTKB|A5PK51538 NAPRT1 "Nicotinate phosphoribo 0.411 0.137 0.472 4.8e-26
UNIPROTKB|F1N3B0538 NAPRT1 "Nicotinate phosphoribo 0.411 0.137 0.472 4.8e-26
UNIPROTKB|J9P3W8 549 NAPRT1 "Uncharacterized protei 0.411 0.134 0.472 5e-26
MGI|MGI:2442664538 Naprt1 "nicotinate phosphoribo 0.411 0.137 0.445 1.5e-24
UNIPROTKB|C9J8U2490 NAPRT1 "Nicotinate phosphoribo 0.411 0.151 0.459 2.8e-24
WB|WBGene00021882 Y54G2A.17 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
 Score = 269 (99.8 bits), Expect = 2.5e-42, Sum P(3) = 2.5e-42
 Identities = 49/72 (68%), Positives = 61/72 (84%)

Query:    87 WFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPR 146
             +F ++ IVASNDINEETI+SLN+Q H I+ FG+GTHLVTCQ+QPALGCVYKLV  +  P+
Sbjct:   363 FFEKMSIVASNDINEETIMSLNDQQHEINAFGVGTHLVTCQKQPALGCVYKLVAQSAQPK 422

Query:   147 IKLSQDVGKVAV 158
             IKLSQDV K+ +
Sbjct:   423 IKLSQDVTKITI 434
GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA
GO:0019358 "nicotinate nucleotide salvage" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0009435 "NAD biosynthetic process" evidence=IEA
GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP
GO:0040007 "growth" evidence=IMP
GO:0002119 "nematode larval development" evidence=IMP
GO:0040035 "hermaphrodite genitalia development" evidence=IMP
GO:0000003 "reproduction" evidence=IMP
UNIPROTKB|Q95XX1 Y54G2A.17 "Nicotinate phosphoribosyltransferase" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268472 naprt "nicotinate phosphoribosyltransferase-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0031589 CG3714 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1897 naprt1 "nicotinate phosphoribosyltransferase domain containing 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A5PK51 NAPRT1 "Nicotinate phosphoribosyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1N3B0 NAPRT1 "Nicotinate phosphoribosyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9P3W8 NAPRT1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:2442664 Naprt1 "nicotinate phosphoribosyltransferase domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|C9J8U2 NAPRT1 "Nicotinate phosphoribosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VQX4PNCB_DROME2, ., 4, ., 2, ., 1, 10.52730.85550.2774yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.2LOW CONFIDENCE prediction!
4th Layer2.4.2.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query180
PLN02885 545 PLN02885, PLN02885, nicotinate phosphoribosyltrans 1e-58
cd01570327 cd01570, NAPRTase_A, Nicotinate phosphoribosyltran 7e-34
TIGR01513443 TIGR01513, NAPRTase_put, putative nicotinate phosp 1e-30
PRK09243464 PRK09243, PRK09243, nicotinate phosphoribosyltrans 7e-28
PRK12484443 PRK12484, PRK12484, nicotinate phosphoribosyltrans 1e-17
COG1488405 COG1488, PncB, Nicotinic acid phosphoribosyltransf 4e-16
cd01567343 cd01567, NAPRTase_PncB, Nicotinate phosphoribosylt 1e-12
pfam04095245 pfam04095, NAPRTase, Nicotinate phosphoribosyltran 2e-12
cd00516281 cd00516, PRTase_typeII, Phosphoribosyltransferase 7e-10
PRK05321400 PRK05321, PRK05321, nicotinate phosphoribosyltrans 2e-07
PLN02885545 PLN02885, PLN02885, nicotinate phosphoribosyltrans 4e-06
cd01401377 cd01401, PncB_like, Nicotinate phosphoribosyltrans 6e-06
>gnl|CDD|178473 PLN02885, PLN02885, nicotinate phosphoribosyltransferase Back     alignment and domain information 
 Score =  191 bits (487), Expect = 1e-58
 Identities = 78/179 (43%), Positives = 96/179 (53%), Gaps = 49/179 (27%)

Query: 29  DLLALSISWRNKISPILDVLTD--EASDGELAALISYAIAFPDGFMALVDTYDV------ 80
           D ++L   W +K+     +     E +  ELAA  SYA+AFP+ F+ALVDTYDV      
Sbjct: 238 DFVSLVQEWLSKLQESSSLRGVFSETNQSELAAFTSYALAFPNSFLALVDTYDVMKSGIP 297

Query: 81  -----------------------------------------KRYNIPWFAELQIVASNDI 99
                                                    +   +P F ++ I ASNDI
Sbjct: 298 NFCAVALALNDLGYKAVGIRLDSGDLAYLSLEARKFFRTIEEELGVPGFGKMSITASNDI 357

Query: 100 NEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAV 158
           NEET+ +LN+QGH ID FGIGTHLVTC  QPALGCVYKLVEING PRIKLS+DV KV +
Sbjct: 358 NEETLDALNKQGHEIDAFGIGTHLVTCYAQPALGCVYKLVEINGQPRIKLSEDVEKVTI 416

Length = 545
>gnl|CDD|238804 cd01570, NAPRTase_A, Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A Back     alignment and domain information
>gnl|CDD|233446 TIGR01513, NAPRTase_put, putative nicotinate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|236426 PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated Back     alignment and domain information
>gnl|CDD|237112 PRK12484, PRK12484, nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|224405 COG1488, PncB, Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|238801 cd01567, NAPRTase_PncB, Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>gnl|CDD|202885 pfam04095, NAPRTase, Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>gnl|CDD|238286 cd00516, PRTase_typeII, Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD Back     alignment and domain information
>gnl|CDD|235406 PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|178473 PLN02885, PLN02885, nicotinate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|238695 cd01401, PncB_like, Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 180
PLN02885 545 nicotinate phosphoribosyltransferase 100.0
TIGR01513443 NAPRTase_put putative nicotinate phosphoribosyltra 100.0
cd01401377 PncB_like Nicotinate phosphoribosyltransferase (NA 100.0
PRK12484443 nicotinate phosphoribosyltransferase; Provisional 99.98
PRK09243464 nicotinate phosphoribosyltransferase; Validated 99.98
PRK05321400 nicotinate phosphoribosyltransferase; Provisional 99.98
TIGR01514394 NAPRTase nicotinate phosphoribosyltransferase. Thi 99.97
COG1488405 PncB Nicotinic acid phosphoribosyltransferase [Coe 99.91
cd01570327 NAPRTase_A Nicotinate phosphoribosyltransferase (N 99.9
PHA02594470 nadV nicotinamide phosphoribosyl transferase; Prov 99.89
PRK09198463 putative nicotinate phosphoribosyltransferase; Pro 99.88
PF04095245 NAPRTase: Nicotinate phosphoribosyltransferase (NA 99.86
PRK07188352 nicotinate phosphoribosyltransferase; Provisional 99.85
cd01569407 PBEF_like pre-B-cell colony-enhancing factor (PBEF 99.83
KOG2511|consensus420 99.77
cd01567343 NAPRTase_PncB Nicotinate phosphoribosyltransferase 99.73
PRK08662343 nicotinate phosphoribosyltransferase; Reviewed 99.71
cd01571302 NAPRTase_B Nicotinate phosphoribosyltransferase (N 99.58
cd00516281 PRTase_typeII Phosphoribosyltransferase (PRTase) t 99.13
PF01729169 QRPTase_C: Quinolinate phosphoribosyl transferase, 97.29
cd01573272 modD_like ModD; Quinolinate phosphoribosyl transfe 95.42
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 95.4
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 95.06
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 94.85
PRK09016296 quinolinate phosphoribosyltransferase; Validated 92.4
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 91.85
PRK06106281 nicotinate-nucleotide pyrophosphorylase; Provision 91.21
TIGR00078265 nadC nicotinate-nucleotide pyrophosphorylase. Syno 90.52
cd01568269 QPRTase_NadC Quinolinate phosphoribosyl transferas 89.52
PRK05742277 nicotinate-nucleotide pyrophosphorylase; Provision 89.1
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 88.25
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 88.17
PRK06552213 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 87.9
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 86.2
PRK06096284 molybdenum transport protein ModD; Provisional 84.81
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 84.6
PRK07114222 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 84.28
cd00564196 TMP_TenI Thiamine monophosphate synthase (TMP synt 83.55
PRK07455187 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 83.32
PF01081196 Aldolase: KDPG and KHG aldolase; InterPro: IPR0008 82.15
TIGR00693196 thiE thiamine-phosphate pyrophosphorylase. This mo 81.88
cd01572268 QPRTase Quinolinate phosphoribosyl transferase (QA 81.74
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 81.54
>PLN02885 nicotinate phosphoribosyltransferase Back     alignment and domain information 
Probab=100.00  E-value=5e-45  Score=340.60  Aligned_cols=165  Identities=50%  Similarity=0.795  Sum_probs=155.3

Q ss_pred             ceeeeccCccccccccccccCCCCc-chHHHHHHHHHHhhc--CccccceeeecccHHHHHHHHHHHCCCCeEEeeeecc
Q psy15542          3 SSILILSYLSSLFSQTIQDRASGQD-ADLLALSISWRNKIS--PILDVLTDEASDGELAALISYAIAFPDGFMALVDTYD   79 (180)
Q Consensus         3 ~~i~s~~~~~~~~~~~l~~~~~~~~-~d~~~~~~~~~~~~~--~~~~~~~~~~~~~E~~Af~aya~~fP~~~i~LvDTYd   79 (180)
                      |||+||.+++++++..++.+++... +||+...+.|+.+.+  ..++....+.+++|++||++||++||+++++|+||||
T Consensus       211 s~i~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~El~AF~aya~~~P~~~i~LvDTyd  290 (545)
T PLN02885        211 AFVSSYMGLDEIVDKTLRSADGSSVCEDFVSLVQEWLSKLQESSSLRGVFSETNQSELAAFTSYALAFPNSFLALVDTYD  290 (545)
T ss_pred             HHHHhccccccccccccccccccccchhHHHHHHHHHHhhhcccccccccccCChhHHHHHHHHHHHCCCCeEEEEEccc
Confidence            7999999999999999999998654 899999999998875  4577778899999999999999999999999999999


Q ss_pred             cc-----------------------------------------------ccCCCCCCceeEEEeCCCCHHHHHHHHHcCC
Q psy15542         80 VK-----------------------------------------------RYNIPWFAELQIVASNDINEETILSLNEQGH  112 (180)
Q Consensus        80 ~~-----------------------------------------------~Ld~~g~~~vkIv~Sn~Lde~~i~~L~~~g~  112 (180)
                      |+                                               +|+++|++++||+|||||||++|.+|+++|+
T Consensus       291 ~l~sg~~n~~~v~~~l~~~g~~~~GVRlDSGDl~~ls~~~r~~~~~~~~~l~~~g~~~~kIv~Sn~Lde~~i~~L~~~g~  370 (545)
T PLN02885        291 VMKSGIPNFCAVALALNDLGYKAVGIRLDSGDLAYLSLEARKFFRTIEEELGVPGFGKMSITASNDINEETLDALNKQGH  370 (545)
T ss_pred             cHHHHHHHHHHHHHHHHhcCcccCeeEECCCChHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCHHHHHHHHHcCC
Confidence            76                                               5678899999999999999999999999999


Q ss_pred             ceeEeeeccccccCCCCCcceeEEEEeEEcCcceeeecCCCCcccCCc--ceeeeee
Q psy15542        113 RIDCFGIGTHLVTCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSD--HLYSFIH  167 (180)
Q Consensus       113 ~id~fGIGT~Lvt~~~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~Pg--~v~r~~~  167 (180)
                      +||+|||||+|+||..+|+||||||||++||+|+||+|++++|+|+||  ++||+|.
T Consensus       371 ~id~fGVGT~LvT~~~~p~l~~VyKLVe~~g~p~~KlS~~~~K~t~PG~K~vyR~~~  427 (545)
T PLN02885        371 EIDAFGIGTHLVTCYAQPALGCVYKLVEINGQPRIKLSEDVEKVTIPCKKRCYRLYG  427 (545)
T ss_pred             CccEEecCCccccCCCCCCCceEEEEEEECCeeeeEecCCCCCccCCcceEEEEEEc
Confidence            999999999999999999999999999999999999999999999999  8999985

>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase Back     alignment and domain information
>cd01401 PncB_like Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB Back     alignment and domain information
>PRK12484 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09243 nicotinate phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK05321 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01514 NAPRTase nicotinate phosphoribosyltransferase Back     alignment and domain information
>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A Back     alignment and domain information
>PHA02594 nadV nicotinamide phosphoribosyl transferase; Provisional Back     alignment and domain information
>PRK09198 putative nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PF04095 NAPRTase: Nicotinate phosphoribosyltransferase (NAPRTase) family; InterPro: IPR015977 Nicotinate phosphoribosyltransferase (2 Back     alignment and domain information
>PRK07188 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>cd01569 PBEF_like pre-B-cell colony-enhancing factor (PBEF)-like Back     alignment and domain information
>KOG2511|consensus Back     alignment and domain information
>cd01567 NAPRTase_PncB Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>PRK08662 nicotinate phosphoribosyltransferase; Reviewed Back     alignment and domain information
>cd01571 NAPRTase_B Nicotinate phosphoribosyltransferase (NAPRTase), subgroup B Back     alignment and domain information
>cd00516 PRTase_typeII Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD Back     alignment and domain information
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 Back     alignment and domain information
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK09016 quinolinate phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase Back     alignment and domain information
>cd01568 QPRTase_NadC Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>PRK06096 molybdenum transport protein ModD; Provisional Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI Back     alignment and domain information
>PRK07455 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4 Back     alignment and domain information
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase Back     alignment and domain information
>cd01572 QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query180
2f7f_A 494 Crystal Structure Of Enterococcus Faecalis Putative 1e-12
>pdb|2F7F|A Chain A, Crystal Structure Of Enterococcus Faecalis Putative Nicotinate Phosphoribosyltransferase, New York Structural Genomics Consortium Length = 494 Back     alignment and structure 
Iteration: 1

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 88  FAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGCVYKLVEING---- 143
           F E +I ASND++E TIL+L  Q  +ID +G+GT L+T   QPALG V+KLV I G    
Sbjct: 284 FTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQ 343
Query: 144 -MPRIKLSQDVGKVAV 158
               IKLS +  KV  
Sbjct: 344 MKDTIKLSSNAEKVTT 359

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query180
2f7f_A 494 Nicotinate phosphoribosyltransferase, putative; st 7e-36
2i1o_A398 Nicotinate phosphoribosyltransferase; ZIN ION, zin 2e-31
2i14_A395 Nicotinate-nucleotide pyrophosphorylase; ligand bi 2e-25
1vlp_A441 Naprtase, nicotinate phosphoribosyltransferase; st 2e-24
3os4_A407 Naprtase, nicotinate phosphoribosyltransferase; st 6e-24
1yir_A408 Naprtase 2, nicotinate phosphoribosyltransferase 2 1e-23
2im5_A394 Nicotinate phosphoribosyltransferase; structural g 2e-18
1ybe_A449 Naprtase, nicotinate phosphoribosyltransferase; st 3e-18
3dhf_A484 Nicotinamide phosphoribosyltransferase; NMPRTASE, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1 Length = 494 Back     alignment and structure
 Score =  129 bits (326), Expect = 7e-36
 Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 45/147 (30%)

Query: 54  DGELAALISYAIAFPDGFMALVDTYDV--------------------------------- 80
             +  A ++YA    D  + LVDTYD                                  
Sbjct: 212 GNDYEAFMAYAKTHRD-CVFLVDTYDTLKAGVPSAIRVAREMGDKINFLGVRIDSGDMAY 270

Query: 81  ------KRYNIPWFAELQIVASNDINEETILSLNEQGHRIDCFGIGTHLVTCQRQPALGC 134
                 ++ +   F E +I ASND++E TIL+L  Q  +ID +G+GT L+T   QPALG 
Sbjct: 271 ISKRVREQLDEAGFTEAKIYASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGA 330

Query: 135 VYKLVEING-----MPRIKLSQDVGKV 156
           V+KLV I G        IKLS +  KV
Sbjct: 331 VFKLVSIEGEDGQMKDTIKLSSNAEKV 357
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Length = 398 Back     alignment and structure
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1 Length = 395 Back     alignment and structure
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2 Length = 441 Back     alignment and structure
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis} Length = 407 Back     alignment and structure
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2 Length = 408 Back     alignment and structure
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis} Length = 394 Back     alignment and structure
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2 Length = 449 Back     alignment and structure
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A* Length = 484 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query180
4hl7_A446 Naprtase, nicotinate phosphoribosyltransferase; st 99.97
3os4_A407 Naprtase, nicotinate phosphoribosyltransferase; st 99.97
2im5_A394 Nicotinate phosphoribosyltransferase; structural g 99.97
1yir_A408 Naprtase 2, nicotinate phosphoribosyltransferase 2 99.97
1ybe_A449 Naprtase, nicotinate phosphoribosyltransferase; st 99.97
1vlp_A441 Naprtase, nicotinate phosphoribosyltransferase; st 99.97
2f7f_A 494 Nicotinate phosphoribosyltransferase, putative; st 99.95
3dhf_A484 Nicotinamide phosphoribosyltransferase; NMPRTASE, 99.94
2i14_A395 Nicotinate-nucleotide pyrophosphorylase; ligand bi 99.87
2i1o_A398 Nicotinate phosphoribosyltransferase; ZIN ION, zin 99.86
2jbm_A299 Nicotinate-nucleotide pyrophosphorylase; NAD, enzy 99.15
3c2e_A294 Nicotinate-nucleotide pyrophosphorylase; qprtase, 98.84
3paj_A320 Nicotinate-nucleotide pyrophosphorylase, carboxyl; 98.48
3gnn_A298 Nicotinate-nucleotide pyrophosphorylase; decode bi 98.35
2b7n_A273 Probable nicotinate-nucleotide pyrophosphorylase; 98.27
1qap_A296 Quinolinic acid phosphoribosyltransferase; glycosy 97.89
3tqv_A287 Nicotinate-nucleotide pyrophosphorylase; glycosylt 96.45
1qpo_A284 Quinolinate acid phosphoribosyl transferase; type 96.43
3l0g_A300 Nicotinate-nucleotide pyrophosphorylase; ssgcid, N 95.46
1x1o_A286 Nicotinate-nucleotide pyrophosphorylase; transfera 94.39
1o4u_A285 Type II quinolic acid phosphoribosyltransferase; s 93.95
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 83.96
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 83.42
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 82.13
1wa3_A205 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, 81.96
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae} Back     alignment and structure
Probab=99.97  E-value=1.2e-32  Score=251.32  Aligned_cols=112  Identities=28%  Similarity=0.307  Sum_probs=102.3

Q ss_pred             eeeec-------ccHHHHHHHHHHHCCCC-eEEeeeecccc---------------------------------ccCCCC
Q psy15542         49 TDEAS-------DGELAALISYAIAFPDG-FMALVDTYDVK---------------------------------RYNIPW   87 (180)
Q Consensus        49 ~~~~~-------~~E~~Af~aya~~fP~~-~i~LvDTYd~~---------------------------------~Ld~~g   87 (180)
                      ++|+|       ++|++||++|+++||++ +|+|+||||+.                                 .||..|
T Consensus       234 ~i~~~~al~~~~~~e~~Af~~~~~~yp~~~~i~LvDTy~~~~fl~~~~~~~~~~~~GVR~DSGDp~~~~~k~r~~ld~~G  313 (446)
T 4hl7_A          234 WFMGHQALVNERDSQQVALERWLTAFDGMLAIAPTDTLTIDAFLNDFNRHLANAYDGVRHDSGCPFRWGDKMIAHYQQLG  313 (446)
T ss_dssp             HHHHHHHHSCGGGHHHHHHHHHHHHCSSCCCEEESCSSCHHHHHHHCCHHHHHHSCEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred             HHHHhhcccccCCCHHHHHHHHHHHCCCCCeEEEEEeCCcHHHHHHHHHHhcccccEEecCCCChHHHHHHHHHHHHHcC
Confidence            45666       89999999999999987 59999999988                                 677788


Q ss_pred             CC-cee-EEEeCCCCHHHHHHHHH--cCCceeEeeeccccccCCC---------CCcceeEEEEeEEcCcceeeecCCCC
Q psy15542         88 FA-ELQ-IVASNDINEETILSLNE--QGHRIDCFGIGTHLVTCQR---------QPALGCVYKLVEINGMPRIKLSQDVG  154 (180)
Q Consensus        88 ~~-~vk-Iv~Sn~Lde~~i~~L~~--~g~~id~fGIGT~Lvt~~~---------~p~Lg~VyKLVei~G~P~~KlS~~~~  154 (180)
                      ++ ++| ||+||||||++|.+|.+  +++++|+|||||+|+|+.+         +||||||||||++||+|++|+|++++
T Consensus       314 ~~~~~K~Iv~SdgLde~~i~~L~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~VyKLve~~G~P~~KlSd~~g  393 (446)
T 4hl7_A          314 IDPTTKLFIFSDGLDFDQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKISDQPE  393 (446)
T ss_dssp             CCGGGSEEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEEEEEEETTEECCBCCSSGG
T ss_pred             CCCCCcEEEEcCCCCHHHHHHHHHHhcCCCCcEEEeccceeccCcccccccccCCCCceeEEEEEEECCcceeEecCCcc
Confidence            85 785 99999999999999976  8899999999999999987         89999999999999999999999999


Q ss_pred             cccCCc
Q psy15542        155 KVAVSD  160 (180)
Q Consensus       155 K~T~Pg  160 (180)
                      |+|++.
T Consensus       394 K~t~~d  399 (446)
T 4hl7_A          394 KAMCED  399 (446)
T ss_dssp             GCBCSC
T ss_pred             cccCCC
Confidence            999854
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis} Back     alignment and structure
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis} Back     alignment and structure
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A* Back     alignment and structure
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Back     alignment and structure
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A Back     alignment and structure
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A* Back     alignment and structure
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} Back     alignment and structure
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A* Back     alignment and structure
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp} Back     alignment and structure
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A* Back     alignment and structure
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} Back     alignment and structure
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus} Back     alignment and structure
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 180
d1yira1255 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltran 6e-25
d1ybea1266 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltran 3e-24
d1vlpa2266 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltran 1e-23
d2f7fa1 345 c.1.17.1 (A:141-485) Putative nicotinate phosphori 3e-22
d1ytda1270 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltran 1e-18
d2i14a1279 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyropho 6e-13
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Length = 255 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 95.0 bits (236), Expect = 6e-25
 Identities = 26/148 (17%), Positives = 38/148 (25%), Gaps = 39/148 (26%)

Query: 48  LTDEASDGELAALISYAIAFPDGF-MALVDTYDV-------------------------- 80
           L     D + AAL  +   +     +AL D                              
Sbjct: 91  LGPRLIDSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPL 150

Query: 81  ----------KRYNIPWFAELQIVASNDINEETILSLNEQGHRI-DCFGIGTHLVTCQR- 128
                      +  I    +  + +        +        RI   FGIGTH       
Sbjct: 151 LWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCDLPG 210

Query: 129 QPALGCVYKLVEINGMPRIKLSQDVGKV 156
              +  V K+   NG P  K+S   GK 
Sbjct: 211 VEPMNIVVKMSACNGHPVAKISDTPGKA 238
>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Length = 266 Back     information, alignment and structure
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266 Back     information, alignment and structure
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Length = 345 Back     information, alignment and structure
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Length = 270 Back     information, alignment and structure
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query180
d1ybea1266 Nicotinate phosphoribosyltransferase, C-terminal d 100.0
d2f7fa1 345 Putative nicotinate phosphoribosyltransferase EF26 99.97
d1yira1255 Nicotinate phosphoribosyltransferase, C-terminal d 99.97
d1vlpa2266 Nicotinate phosphoribosyltransferase, C-terminal d 99.96
d1ytda1270 Nicotinate phosphoribosyltransferase Ta1145 {Therm 99.93
d2i14a1279 Nicotinate-nucleotide pyrophosphorylase PF1904 {Py 99.91
d1qpoa1169 Quinolinic acid phosphoribosyltransferase (Nicotin 92.44
d1o4ua1170 Quinolinic acid phosphoribosyltransferase (Nicotin 89.99
d1wa3a1202 KDPG aldolase {Thermotoga maritima [TaxId: 2336]} 81.98
>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: Monomeric nicotinate phosphoribosyltransferase C-terminal domain
domain: Nicotinate phosphoribosyltransferase, C-terminal domain
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.2e-36  Score=257.23  Aligned_cols=121  Identities=17%  Similarity=0.250  Sum_probs=105.3

Q ss_pred             ccHHHHHHHHHHHCCCC-eEEeeeecccc--------------------------------ccCCCCCC--ceeEEEeCC
Q psy15542         54 DGELAALISYAIAFPDG-FMALVDTYDVK--------------------------------RYNIPWFA--ELQIVASND   98 (180)
Q Consensus        54 ~~E~~Af~aya~~fP~~-~i~LvDTYd~~--------------------------------~Ld~~g~~--~vkIv~Sn~   98 (180)
                      ++|.+||++|+++||++ .|+|+|||++.                                .|+..|+.  ..+||+|||
T Consensus       100 ~~e~~Af~~~~~~yp~~~~i~L~DT~~~~~~~~~~~~~~~~~~GVRlDSGDl~~ls~~~r~~ld~~G~~p~~~~Iv~S~~  179 (266)
T d1ybea1         100 AAPYQVLKDWNRLYGGNLLIVLPDAFGTAAFLRNAPEWVADWTGFRPDSAPPIEGGEKIIEWWRKMGRDPRTKMLIFSDG  179 (266)
T ss_dssp             HHHHHHHHHHHHHCCGGGCEECCCTTCHHHHHHTCCGGGGGSSEECCCSSCHHHHHHHHHHHHHHTTCCGGGSEEEECTT
T ss_pred             HHHHHHHHHHHHHCCCCceEEecCcccHHHHHHHHHHhhccccceeeCCCChHHHHHHHHHHHHHcCCCCCCcEEEEECC
Confidence            67899999999999975 69999999987                                56666653  235999999


Q ss_pred             CCHHHHHHHHH--cCCceeEeeeccccc---------cCCCCCcceeEEEEeEEcCcceeeecCCCCcccCCcceeeeee
Q psy15542         99 INEETILSLNE--QGHRIDCFGIGTHLV---------TCQRQPALGCVYKLVEINGMPRIKLSQDVGKVAVSDHLYSFIH  167 (180)
Q Consensus        99 Lde~~i~~L~~--~g~~id~fGIGT~Lv---------t~~~~p~Lg~VyKLVei~G~P~~KlS~~~~K~T~Pg~v~r~~~  167 (180)
                      |||++|.+|++  +++++|+|||||+|+         ||+++|+|||||||||+||+|+||+|++++|+|+|++.|+.|+
T Consensus       180 LDe~~i~~l~~~~~g~~~d~fGVGT~L~~~~~~~~~~t~~~~p~l~~VyKLve~~g~P~~KlSd~~~K~tg~~~~~~~~~  259 (266)
T d1ybea1         180 LDVDAIVDTYRHFEGRVRMSFGWGTNLTNDFAGCAPKTIASLKPISIVCKVSDANGRPAVKLSDNPQKATGDPAEVERYL  259 (266)
T ss_dssp             CCHHHHHHHHHHHTTTSEEEEEECHHHHCCCTTCCC-----CCCCCEEEEEEEETTEECCBCCSSGGGCBSCHHHHHHHH
T ss_pred             CCHHHHHHHHHHhccCcceeeeccceeecccCCCCccccccCCCcceEEEeeeeCCeeeeEecCCCccccCCHHHHHHHH
Confidence            99999999987  588999999999999         6677899999999999999999999999999999999999999


Q ss_pred             ehhcCCC
Q psy15542        168 ELWLQNA  174 (180)
Q Consensus       168 ~l~~~~~  174 (180)
                      ++|.+++
T Consensus       260 r~~g~~~  266 (266)
T d1ybea1         260 KFFGEED  266 (266)
T ss_dssp             HHHCCCC
T ss_pred             HHhcCCC
Confidence            9997653
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure