Psyllid ID: psy15810
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 343 | ||||||
| 242012107 | 557 | hypothetical protein Phum_PHUM275760 [Pe | 0.962 | 0.592 | 0.529 | 5e-98 | |
| 91083497 | 346 | PREDICTED: similar to AGAP002408-PA [Tri | 0.956 | 0.947 | 0.502 | 2e-93 | |
| 240849553 | 332 | MYG1 protein-like [Acyrthosiphon pisum] | 0.930 | 0.960 | 0.506 | 2e-90 | |
| 307189446 | 337 | UPF0160 protein MYG1 [Camponotus florida | 0.950 | 0.967 | 0.491 | 1e-89 | |
| 345496652 | 370 | PREDICTED: UPF0160 protein MYG1, mitocho | 0.938 | 0.870 | 0.506 | 1e-89 | |
| 260832468 | 336 | hypothetical protein BRAFLDRAFT_125216 [ | 0.930 | 0.949 | 0.493 | 2e-89 | |
| 332027751 | 333 | UPF0160 protein MYG1, mitochondrial [Acr | 0.947 | 0.975 | 0.495 | 2e-89 | |
| 322802932 | 336 | hypothetical protein SINV_09604 [Solenop | 0.959 | 0.979 | 0.488 | 3e-89 | |
| 317418812 | 348 | Melanocyte proliferating gene 1 [Dicentr | 0.944 | 0.931 | 0.512 | 5e-89 | |
| 260832394 | 342 | hypothetical protein BRAFLDRAFT_88459 [B | 0.921 | 0.923 | 0.498 | 6e-89 |
| >gi|242012107|ref|XP_002426782.1| hypothetical protein Phum_PHUM275760 [Pediculus humanus corporis] gi|212510964|gb|EEB14044.1| hypothetical protein Phum_PHUM275760 [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/338 (52%), Positives = 240/338 (71%), Gaps = 8/338 (2%)
Query: 4 LSRTVKTIGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYN 61
++ +K IGTH G+FHCDEVL C MLK L Y ++EIIR+R+ + L+ D+V+DVGG Y+
Sbjct: 1 MTSVLKRIGTHDGVFHCDEVLACFMLKKLPEYQNSEIIRSRNPEVLNTCDIVVDVGGIYD 60
Query: 62 PDKLRFDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKK-LSPIQEEYFLN 120
P K R+DHHQK FN T S+ D+ K+KLSSAGL+Y HFG IL+ L P ++ ++
Sbjct: 61 PSKHRYDHHQKDFNHTMNSLNP-DRPWKIKLSSAGLVYHHFGERILESILGPPKDSGTVS 119
Query: 121 KLFDKVYDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFK 180
LF +Y+N IQEVDGIDNG+ MF+GEP Y I T+L +RV LNP WN + D +LF
Sbjct: 120 NLFSFMYENFIQEVDGIDNGVLMFDGEPRYSIHTNLSSRVKYLNPSWNSEENEDSQKLFH 179
Query: 181 KAMAITLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFEL 240
AM + +EF DRI ++ +WPAR LV +AI R S H+SG IIELK CPWK H F+L
Sbjct: 180 AAMDLVGKEFIDRIQFFTKSFWPARDLVKEAILNRNSTHQSGSIIELKQCCPWKKHLFQL 239
Query: 241 EQEMELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGI 300
E+E+ + QI++ IF +D ++R++AV + SFVLR PL++TW GLRD+ LS ++GI
Sbjct: 240 EKELGITGQIKYVIFQSD----SWRIEAVPINPDSFVLRLPLHETWRGLRDEKLSKISGI 295
Query: 301 PDCIFAHANGFIGGNKTREGALQMALKTLELAEKDEKA 338
+CIF H+NGFIGGNKTREGAL+MALKTLE E++ +
Sbjct: 296 DECIFVHSNGFIGGNKTREGALKMALKTLESKEENNQG 333
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91083497|ref|XP_972332.1| PREDICTED: similar to AGAP002408-PA [Tribolium castaneum] gi|270010805|gb|EFA07253.1| hypothetical protein TcasGA2_TC013284 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|240849553|ref|NP_001155657.1| MYG1 protein-like [Acyrthosiphon pisum] gi|239788361|dbj|BAH70867.1| ACYPI006340 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|307189446|gb|EFN73856.1| UPF0160 protein MYG1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
| >gi|345496652|ref|XP_001601011.2| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|260832468|ref|XP_002611179.1| hypothetical protein BRAFLDRAFT_125216 [Branchiostoma floridae] gi|229296550|gb|EEN67189.1| hypothetical protein BRAFLDRAFT_125216 [Branchiostoma floridae] | Back alignment and taxonomy information |
|---|
| >gi|332027751|gb|EGI67818.1| UPF0160 protein MYG1, mitochondrial [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
| >gi|322802932|gb|EFZ23073.1| hypothetical protein SINV_09604 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
| >gi|317418812|emb|CBN80850.1| Melanocyte proliferating gene 1 [Dicentrarchus labrax] | Back alignment and taxonomy information |
|---|
| >gi|260832394|ref|XP_002611142.1| hypothetical protein BRAFLDRAFT_88459 [Branchiostoma floridae] gi|229296513|gb|EEN67152.1| hypothetical protein BRAFLDRAFT_88459 [Branchiostoma floridae] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 343 | ||||||
| ZFIN|ZDB-GENE-060312-32 | 381 | myg1 "melanocyte proliferating | 0.927 | 0.834 | 0.469 | 2.5e-74 | |
| DICTYBASE|DDB_G0267768 | 329 | DDB_G0267768 "metal-dependent | 0.918 | 0.957 | 0.465 | 1.1e-73 | |
| UNIPROTKB|Q58DG1 | 381 | Q58DG1 "UPF0160 protein MYG1, | 0.918 | 0.826 | 0.472 | 1.4e-73 | |
| RGD|1359237 | 381 | Myg1 "melanocyte proliferating | 0.918 | 0.826 | 0.472 | 3.6e-73 | |
| MGI|MGI:1929864 | 380 | Myg1 "melanocyte proliferating | 0.918 | 0.828 | 0.469 | 1.2e-72 | |
| UNIPROTKB|Q9HB07 | 376 | C12orf10 "UPF0160 protein MYG1 | 0.918 | 0.837 | 0.469 | 5.3e-72 | |
| TAIR|locus:2165760 | 373 | AT5G41970 "AT5G41970" [Arabido | 0.927 | 0.852 | 0.421 | 1.5e-65 | |
| FB|FBgn0037652 | 360 | CG11980 [Drosophila melanogast | 0.921 | 0.877 | 0.442 | 2.3e-64 | |
| TAIR|locus:2082981 | 354 | AT3G49320 "AT3G49320" [Arabido | 0.927 | 0.898 | 0.397 | 1.1e-62 | |
| POMBASE|SPAC694.04c | 324 | SPAC694.04c "conserved eukaryo | 0.918 | 0.972 | 0.378 | 4.9e-53 |
| ZFIN|ZDB-GENE-060312-32 myg1 "melanocyte proliferating gene 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 153/326 (46%), Positives = 212/326 (65%)
Query: 11 IGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQXXXXXXXXXXXXXXXYNPDKLRFD 68
IGTH+G FHCDEVL C +L+ L Y DAEI+R+RD Y+ + R+D
Sbjct: 57 IGTHNGTFHCDEVLACFLLRQLPEYKDAEIVRSRDASVLAECDVVVDVGGEYDHSRQRYD 116
Query: 69 HHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQE-EYFLNKLFDKVY 127
HHQ+ F E+F SV + + KLSSAGL+Y H+G +L++L+ +QE E L L+DK+Y
Sbjct: 117 HHQRAFAESFHSVCAQKPW-VTKLSSAGLVYVHYGRRVLQQLTHLQEDEPQLEVLYDKMY 175
Query: 128 DNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAITL 187
+ ++EVD +DNGI +GE Y IS+ + +RVS LNP+WN +K D E F+KA+A+
Sbjct: 176 EGFVEEVDAVDNGISQSDGEQRYTISSTISSRVSYLNPQWN-SKEQDTEEGFRKALALVG 234
Query: 188 EEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTP-CPWKSHFFELEQEMEL 246
EFQDR+ Y+ W PAR +VL AIK R + SG+++ L+ CPWK H F LE+E++L
Sbjct: 235 SEFQDRLLYFTNAWLPARDVVLQAIKSRHQVDVSGQVLLLQQGGCPWKEHLFALEKELQL 294
Query: 247 GDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIFA 306
+ I+F ++ D N +RVQ V +F R L + W GLRDD LS ++GIP+CIF
Sbjct: 295 QELIKFVLYC--DQNGHWRVQCVPAGPNTFQNRLSLLEEWRGLRDDALSELSGIPECIFV 352
Query: 307 HANGFIGGNKTREGALQMALKTLELA 332
HA GFIGGNKT+ GAL+MA +TL+ A
Sbjct: 353 HAGGFIGGNKTQSGALEMARRTLQTA 378
|
|
| DICTYBASE|DDB_G0267768 DDB_G0267768 "metal-dependent protein hydrolase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q58DG1 Q58DG1 "UPF0160 protein MYG1, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|1359237 Myg1 "melanocyte proliferating gene 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:1929864 Myg1 "melanocyte proliferating gene 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9HB07 C12orf10 "UPF0160 protein MYG1, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| TAIR|locus:2165760 AT5G41970 "AT5G41970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| FB|FBgn0037652 CG11980 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2082981 AT3G49320 "AT3G49320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC694.04c SPAC694.04c "conserved eukaryotic protein" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 343 | |||
| pfam03690 | 315 | pfam03690, UPF0160, Uncharacterized protein family | 1e-162 | |
| COG4286 | 306 | COG4286, COG4286, Uncharacterized conserved protei | 2e-87 |
| >gnl|CDD|217674 pfam03690, UPF0160, Uncharacterized protein family (UPF0160) | Back alignment and domain information |
|---|
Score = 454 bits (1170), Expect = e-162
Identities = 165/324 (50%), Positives = 218/324 (67%), Gaps = 11/324 (3%)
Query: 9 KTIGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLR 66
K IGTHSG FH DEVL +MLKLL Y DAEI+RTRD + L+K D+V+DVGG Y+P+K R
Sbjct: 1 KKIGTHSGSFHADEVLAVAMLKLLPEYKDAEIVRTRDPEVLEKCDIVVDVGGVYDPEKKR 60
Query: 67 FDHHQKTFNETFASVRKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEEYFLNKLFDKV 126
FDHHQ+ F ETF + + KLSSAGL+Y HFG +I+++L + +E + L+DKV
Sbjct: 61 FDHHQRGFPETF------LREDGTKLSSAGLVYKHFGKEIIRELLKLLDEEDVELLYDKV 114
Query: 127 YDNLIQEVDGIDNGIPMFEGEPIYHISTHLGARVSRLNPKWNDTKTVDEMELFKKAMAIT 186
Y + ++E+D IDNG+ ++GEP Y I+T L ARV RLNP WN+ DE F KA+ +
Sbjct: 115 YKSFVEEIDAIDNGVSQYDGEPKYKINTSLSARVGRLNPTWNEPDPEDEDAAFLKAVELA 174
Query: 187 LEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELEQEMEL 246
EF+ +DYY W PAR +V +AI +RF + SG+I+ L CPWK H FELE+E L
Sbjct: 175 GSEFERFVDYYAASWLPARAIVAEAIAKRFEVDPSGRILVLDRGCPWKEHLFELEKEHNL 234
Query: 247 GDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIFA 306
+ I+F ++P + +RVQ V + SF R PL + W GLRD++LS V+GIP +F
Sbjct: 235 -EGIKFVLYPDG--SGQWRVQTVPVEPGSFESRKPLPEAWRGLRDEELSEVSGIPGAVFV 291
Query: 307 HANGFIGGNKTREGALQMALKTLE 330
HA+GFIGG KTREGAL MA LE
Sbjct: 292 HASGFIGGAKTREGALAMAELALE 315
|
This family of proteins contains a large number of metal binding residues. The patterns are suggestive of a phosphoesterase function. The conserved DHH motif may mean this family is related to pfam01368. Length = 315 |
| >gnl|CDD|226736 COG4286, COG4286, Uncharacterized conserved protein related to MYG1 family [Function unknown] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 343 | |||
| KOG2948|consensus | 327 | 100.0 | ||
| PF03690 | 318 | UPF0160: Uncharacterised protein family (UPF0160); | 100.0 | |
| COG4286 | 306 | Uncharacterized conserved protein related to MYG1 | 100.0 |
| >KOG2948|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-133 Score=945.41 Aligned_cols=320 Identities=52% Similarity=0.922 Sum_probs=308.1
Q ss_pred cCcceEEecCCCcchhHHHHHHHHHHh--CCCCeEEeecCccccccccEEEecCCcccCCCCCCcCCCCCcccccccccc
Q psy15810 6 RTVKTIGTHSGMFHCDEVLGCSMLKLL--YPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFDHHQKTFNETFASVRK 83 (343)
Q Consensus 6 ~~~~~IgTH~G~FHaDEvlA~~lL~~l--y~~a~IvRTRD~~~l~~~diVvDVGg~YDp~~~rfDHHQr~F~~tf~~~r~ 83 (343)
+++++||||||+|||||+|||+|||++ |+||+|||||||++|++|||||||||+|||+++|||||||+|+|||++.
T Consensus 2 ~~~~~i~THnG~FH~DEalAc~mLr~lp~f~dAeIvRtRd~~~l~s~DIvvDVGg~yDp~~~ryDHHQr~F~ETfs~~-- 79 (327)
T KOG2948|consen 2 NSTKKIGTHNGTFHCDEALACFMLRLLPEFKDAEIVRTRDPKVLESCDIVVDVGGVYDPEKKRYDHHQRGFFETFSPK-- 79 (327)
T ss_pred CCCceEEecCCceehhHHHHHHHHHhccccCCCeeEecCCHHHHhhcCEEEecCccccccccccchhhhhhhhhcCCc--
Confidence 457899999999999999999999998 9999999999999999999999999999999999999999999999985
Q ss_pred cccccccccccccchHHHHHHHHHHHhCCCch-hhhHHHHHHHHHHHHhhhhhcccCCCCCCC-CCCcccccCChhhhhc
Q psy15810 84 EDKFNKVKLSSAGLIYCHFGLDILKKLSPIQE-EYFLNKLFDKVYDNLIQEVDGIDNGIPMFE-GEPIYHISTHLGARVS 161 (343)
Q Consensus 84 ~~~~~~~klSSAGLIykhfG~~ii~~~~~~~~-~~~~~~l~~kvy~~fI~~IDaiDNGi~~~~-~~~~y~~~t~ls~~V~ 161 (343)
++||||||||||||||++||+++++.+. +++++.+|.+||++||+++|||||||++|. .+|+|.++|+||+||+
T Consensus 80 ----~~tKLSSAGLIykhyG~~vi~~~l~~~~s~~~~~~l~~kvY~~Fve~~DAiDNGi~~y~~~~Pry~~~~~l~~rv~ 155 (327)
T KOG2948|consen 80 ----YKTKLSSAGLIYKHYGREVISKILQNKVSSSDLDLLYDKVYKNFVEALDAIDNGISQYGEIEPRYKSSTSLSHRVG 155 (327)
T ss_pred ----cceeecccceeHHHhhHHHHHHHhcccCChhHHHHHHHHHHHHHHHHhhccccchhhhcCCCCccccccchHHHHh
Confidence 9999999999999999999999998866 889999999999999999999999999996 4899999999999999
Q ss_pred ccCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHhhccCCCCcEEEeCCCCCchhhHHhhh
Q psy15810 162 RLNPKWNDTKTVDEMELFKKAMAITLEEFQDRIDYYCTQWWPARKLVLDAIKERFSLHESGKIIELKTPCPWKSHFFELE 241 (343)
Q Consensus 162 ~lNP~w~~~~~~~~de~F~~A~~l~~~ef~~~v~~~~~~~lpAr~~V~~A~~~r~~~~~sg~Il~l~~~~Pwk~~l~~lE 241 (343)
+|||.||+.+..+++++|.+||+++|++|++.|..++++|+|||++|++|+++|+++|+||.|++++++||||+|||+||
T Consensus 156 ~~N~~w~e~~~~~~~e~F~~Am~~vg~ef~~~v~~~~~sWlPar~~v~~ai~er~~~d~sG~i~v~~~~cPWk~hlfelE 235 (327)
T KOG2948|consen 156 RFNPDWNEDSDDDEDERFQRAMDLVGKEFVNSVKFYANSWLPARELVEEAIAERFDVDPSGIILVLKQFCPWKEHLFELE 235 (327)
T ss_pred hcCCCcccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHhcCCCCCceEEEecCCCchHHHHHHHH
Confidence 99999997322279999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCceEEEEEeCCCCCCCeEEEEEeCCCCCCcCCcccchhhcCCChhhhhhhcCCCCcEEeecCCcccccCCHHHH
Q psy15810 242 QEMELGDQIRFAIFPADDFNSTFRVQAVSLTEKSFVLRTPLYKTWMGLRDDDLSSVAGIPDCIFAHANGFIGGNKTREGA 321 (343)
Q Consensus 242 ~e~~~~~~i~fviyp~~~~~~~wriq~Vp~~~~sF~~R~pLP~~WrGlrdeeL~~~sGI~g~vF~H~sGFigg~~t~e~A 321 (343)
+|++++..|+||||+++ +|+|||||||++++||++|+|||++|||||||||+++||||||+|||+|||||||+|+|||
T Consensus 236 ~e~~ie~~i~fvlf~d~--~~~wRVqaVpv~p~sFe~R~pLp~~WRGLrdeeLs~~SgIpgc~FVH~SGFIGgn~T~EgA 313 (327)
T KOG2948|consen 236 KEYKIEVKIKFVLFTDE--SGSWRVQAVPVDPGSFESRKPLPEPWRGLRDEELSEVSGIPGCIFVHASGFIGGNKTREGA 313 (327)
T ss_pred HHhCCCcceEEEEEeCC--CCcEEEEEEecCCCcccccCCCchhhccccchhhhhhcCCCCeEEEeecccccCcccHHHH
Confidence 99999999999999997 6799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q psy15810 322 LQMALKTLELAE 333 (343)
Q Consensus 322 l~mA~~al~~~~ 333 (343)
|+||++||+..+
T Consensus 314 l~Mar~sl~~~e 325 (327)
T KOG2948|consen 314 LEMARKSLEADE 325 (327)
T ss_pred HHHHHHhhcccc
Confidence 999999998654
|
|
| >PF03690 UPF0160: Uncharacterised protein family (UPF0160); InterPro: IPR003226 The function of this domain is not known, but it is found in several uncharacterised proteins and a probable metal dependent protein hydrolase | Back alignment and domain information |
|---|
| >COG4286 Uncharacterized conserved protein related to MYG1 family [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 343 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 8e-10
Identities = 58/362 (16%), Positives = 109/362 (30%), Gaps = 84/362 (23%)
Query: 24 LGCSMLKLLYPDAEIIRTRDQKELDKLDLVLDVGGEYNPDKLRFDHHQKTFNET-----F 78
L C +L + TR ++ V D + DHH T
Sbjct: 264 LSCKIL---------LTTRFKQ-------VTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 79 ASV--RKEDKFNKVKLSSAGLIYCHFGLDILKKLSPIQEEYFLNKLFDKVYDNLIQE-VD 135
+ + L++ + + + + DK+ +I+ ++
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAE--SIRDGLATWDNWKHVNCDKL-TTIIESSLN 364
Query: 136 GIDNGI--PMFEGEPIYHISTHLGARV-SRLNPKWNDTKTVDEM----ELFKKAMAITLE 188
++ MF+ ++ S H+ + S + W D D M +L K ++ +E
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLI---WFDVIKSDVMVVVNKLHKYSL---VE 418
Query: 189 EFQDRIDYYCTQWWPARKLVLDA-IKERFSLHESGKIIE----LKTPCPWKS-------- 235
+ P+ L L ++ ++LH I++ KT
Sbjct: 419 KQPKESTISI----PSIYLELKVKLENEYALHR--SIVDHYNIPKTFDSDDLIPPYLDQY 472
Query: 236 -------HFFELEQEMELGDQIRFAIFPAD--DFN---STFRVQAVSLTEKSFVLRT--- 280
H +E R +F DF R + + +L T
Sbjct: 473 FYSHIGHHLKNIEHPE------RMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
Query: 281 -PLYKTWMGLRDDDLSS-VAGIPDCIFAHANGFIGGNKTREGALQMALKTLELAEKDEKA 338
YK ++ D V I D + I T L++AL + A +E
Sbjct: 527 LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD--LLRIALMAEDEAIFEEAH 584
Query: 339 EQ 340
+Q
Sbjct: 585 KQ 586
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00