Psyllid ID: psy15836

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
MKWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Secondary Structure (PSIPRED)
ccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccEEEEc
Secondary Structure Prediction (SSPRO)
cEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHcccHHHHHHHHccccEEEEc
Coil and Loop (DISEMBL)
mkwsvdftsraksdlpappgycpinnsvqsdvtnqtdgnlLIKKCWEVAlapikqvpmNIVIMYMAGNSISIFW
Flexible Loop (DISEMBL)
mkwsvdftsraksdlpappgYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Low Complexity Region (SEG)
MKWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Disordered region (IsUnstruct)
*********************CPI*******VTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIF*
Disordered Region (DISOPRED)
MKWSVD**************************************CWEVALAPIKQVPMNIVIMYMAGNSISIFW
Disordered Region (DISEMBL)
*************DLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Disordered Region (DISPRO)
MKWSVDFTSRAKSDLPAP***C*************TDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
Q6P011	189	ER membrane protein compl	yes	N/A	0.986	0.386	0.456	2e-12
B5XB24	188	ER membrane protein compl	N/A	N/A	0.986	0.388	0.444	9e-12
Q9CZX9	183	ER membrane protein compl	yes	N/A	0.824	0.333	0.476	1e-10
Q5RC35	183	ER membrane protein compl	yes	N/A	0.824	0.333	0.476	1e-10
Q5J8M3	183	ER membrane protein compl	yes	N/A	0.824	0.333	0.476	1e-10
Q3T0K8	183	ER membrane protein compl	yes	N/A	0.824	0.333	0.476	1e-10
Q6PBF7	180	ER membrane protein compl	yes	N/A	0.945	0.388	0.407	4e-10
Q6GR43	180	ER membrane protein compl	N/A	N/A	0.945	0.388	0.407	4e-10
O94520	193	ER membrane protein compl	yes	N/A	0.729	0.279	0.407	2e-07
P53073	190	ER membrane protein compl	yes	N/A	0.959	0.373	0.321	2e-05

>sp|Q6P011|EMC4_DANRE ER membrane protein complex subunit 4 OS=Danio rerio GN=emc4 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 8/81 (9%)

Query: 1   MKWSVDFT---SRAKSDLPAPPG--YCPINNS---VQSDVTNQTDGNLLIKKCWEVALAP 52
           MKW+V+ +   SR++SD     G    P+  S   V      + D NL+ K+CW+VAL P
Sbjct: 23  MKWAVELSLGNSRSRSDRQGKDGDVMYPVGYSDKPVPDTSVQEADRNLVEKRCWDVALGP 82

Query: 53  IKQVPMNIVIMYMAGNSISIF 73
           +KQ+PMN+ IMYM+GN+ISIF
Sbjct: 83  LKQIPMNLFIMYMSGNTISIF 103

May mediate anti-apoptotic activity.
Danio rerio (taxid: 7955)

>sp|B5XB24|EMC4_SALSA ER membrane protein complex subunit 4 OS=Salmo salar GN=emc4 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 8/81 (9%)

Query: 1   MKWSVDFT---SRAKSDLPAPPG--YCPINNS---VQSDVTNQTDGNLLIKKCWEVALAP 52
           MKW+++ +   +R + D  +  G    PI  S   V      +TD NL+ K+CW+VAL P
Sbjct: 22  MKWALELSLGNARGRGDRQSNQGDVMYPIGYSDKPVPDTSIQETDKNLVEKRCWDVALGP 81

Query: 53  IKQVPMNIVIMYMAGNSISIF 73
           +KQ+PMN+ IMYM+GN+ISIF
Sbjct: 82  LKQIPMNLFIMYMSGNTISIF 102

May mediate anti-apoptotic activity.

Salmo salar (taxid: 8030)

>sp|Q9CZX9|EMC4_MOUSE ER membrane protein complex subunit 4 OS=Mus musculus GN=Emc4 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 11 AKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSI 70
           + D   P GY  ++  V      +TD  L+ K+CW++AL P+KQ+PMN+ IMYMAGN+I
Sbjct: 37 GQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTI 94

Query: 71 SIF 73
          SIF
Sbjct: 95 SIF 97

May mediate anti-apoptotic activity.

Mus musculus (taxid: 10090)

>sp|Q5RC35|EMC4_PONAB ER membrane protein complex subunit 4 OS=Pongo abelii GN=EMC4 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 11 AKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSI 70
           + D   P GY  ++  V      +TD  L+ K+CW++AL P+KQ+PMN+ IMYMAGN+I
Sbjct: 37 GQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTI 94

Query: 71 SIF 73
          SIF
Sbjct: 95 SIF 97

May mediate anti-apoptotic activity.

Pongo abelii (taxid: 9601)

>sp|Q5J8M3|EMC4_HUMAN ER membrane protein complex subunit 4 OS=Homo sapiens GN=EMC4 PE=1 SV=2

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 11 AKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSI 70
           + D   P GY  ++  V      +TD  L+ K+CW++AL P+KQ+PMN+ IMYMAGN+I
Sbjct: 37 GQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTI 94

Query: 71 SIF 73
          SIF
Sbjct: 95 SIF 97

May mediate anti-apoptotic activity.

Homo sapiens (taxid: 9606)

>sp|Q3T0K8|EMC4_BOVIN ER membrane protein complex subunit 4 OS=Bos taurus GN=EMC4 PE=2 SV=1

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 11 AKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSI 70
           + D   P GY  ++  V      +TD  L+ K+CW++AL P+KQ+PMN+ IMYMAGN+I
Sbjct: 37 GQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIALGPLKQIPMNLFIMYMAGNTI 94

Query: 71 SIF 73
          SIF
Sbjct: 95 SIF 97

May mediate anti-apoptotic activity.

Bos taurus (taxid: 9913)

>sp|Q6PBF7|EMC4_XENTR ER membrane protein complex subunit 4 OS=Xenopus tropicalis GN=emc4 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 11/81 (13%)

Query: 2  KWSVDFTSRAK---------SDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAP 52
          KW+++F S             D   P GY   +  V      ++D  L+ K+CW++AL P
Sbjct: 16 KWAIEFGSGGSRGRGERGGLQDSMYPVGYS--DKQVPDTSVQESDHILVEKRCWDIALGP 73

Query: 53 IKQVPMNIVIMYMAGNSISIF 73
          +KQ+PMN+ IMYMAGN+ISIF
Sbjct: 74 LKQIPMNLFIMYMAGNTISIF 94

May mediate anti-apoptotic activity.

Xenopus tropicalis (taxid: 8364)

>sp|Q6GR43|EMC4_XENLA ER membrane protein complex subunit 4 OS=Xenopus laevis GN=emc4 PE=2 SV=1

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 11/81 (13%)

Query: 2  KWSVDFTSRAK---------SDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAP 52
          KW+++F S             D   P GY   +  V      ++D  L+ K+CW++AL P
Sbjct: 16 KWAIEFGSGGSRGRGERGGLQDSMYPVGYS--DKQVPDTSVQESDHILVEKRCWDIALGP 73

Query: 53 IKQVPMNIVIMYMAGNSISIF 73
          +KQ+PMN+ IMYMAGN+ISIF
Sbjct: 74 LKQIPMNLFIMYMAGNTISIF 94

May mediate anti-apoptotic activity.

Xenopus laevis (taxid: 8355)

>sp|O94520|YQ13_SCHPO ER membrane protein complex subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1281.03c PE=3 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 20  GYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIF 73
           G    + S+ +    +   +LL+KK WE+A +P+KQ+PMN ++ YM+GNS+ IF
Sbjct: 50  GNSASSTSIFAKREEELQKDLLLKKAWELAYSPLKQIPMNAILAYMSGNSLQIF 103

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53073|EMC4_YEAST ER membrane protein complex subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMC4 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 13/84 (15%)

Query: 2   KWSVDFTSRAKSDLPAPPGYCPINNS-----VQSDVTNQTDG--------NLLIKKCWEV 48
           K+   +  +  + LP+PPG+   ++       Q D T+QT           L ++K W++
Sbjct: 17  KYIEKYNIQNSNTLPSPPGFEGNSSKGNVTRKQQDATSQTTSLAQKNQITVLQVQKAWQI 76

Query: 49  ALAPIKQVPMNIVIMYMAGNSISI 72
           AL P K +PMNI + YM+G S+ I
Sbjct: 77  ALQPAKSIPMNIFMSYMSGTSLQI 100


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,977,051
Number of Sequences: 539616
Number of extensions: 834631
Number of successful extensions: 1630
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1620
Number of HSP's gapped (non-prelim): 10
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
312384213	169	hypothetical protein AND_02405 [Anophele	0.972	0.426	0.616	1e-18
158293198	172	AGAP010558-PA [Anopheles gambiae str. PE	0.972	0.418	0.578	2e-17
170039511	171	transmembrane protein 85 [Culex quinquef	0.972	0.421	0.52	4e-15
321468773	172	hypothetical protein DAPPUDRAFT_230984 [	0.972	0.418	0.527	6e-15
195019280	166	GH14764 [Drosophila grimshawi] gi|193898	0.945	0.421	0.527	6e-15
242008277	174	conserved hypothetical protein [Pediculu	0.972	0.413	0.532	7e-15
195127772	166	GI11865 [Drosophila mojavensis] gi|19537	0.945	0.421	0.527	1e-14
94468588	172	predicted membrane protein [Aedes aegypt	0.986	0.424	0.493	1e-14
427782877	175	Hypothetical protein [Rhipicephalus pulc	0.972	0.411	0.52	1e-14
157112268	172	hypothetical protein AaeL_AAEL000942 [Ae	0.986	0.424	0.493	1e-14

>gi|312384213|gb|EFR28990.1| hypothetical protein AND_02405 [Anopheles darlingi]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)

Query: 2  KWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQVPMNI 60
          KW +DF + + SD+PAPPGY P  + V S V+N TD  +L++KK WE+AL PIKQ PMN+
Sbjct: 11 KWGLDFNTNSNSDIPAPPGYNPSADVVSSKVSNPTDQSHLILKKSWEIALGPIKQFPMNL 70

Query: 61 VIMYMAGNSISIF 73
          VIMYM+GNSISIF
Sbjct: 71 VIMYMSGNSISIF 83

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293198|ref|XP_314532.3| AGAP010558-PA [Anopheles gambiae str. PEST] gi|157016843|gb|EAA09867.3| AGAP010558-PA [Anopheles gambiae str. PEST]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 58/76 (76%), Gaps = 4/76 (5%)

Query: 2  KWSVDFTSRAKS---DLPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQVP 57
          KW++DF ++ +S   D+ APPGY P  + + S V NQTD  +L++KK WE+AL PIKQ P
Sbjct: 11 KWALDFNTKPRSSGSDIAAPPGYNPSADVISSKVVNQTDQSHLILKKSWEIALGPIKQFP 70

Query: 58 MNIVIMYMAGNSISIF 73
          MN+VIMYM+GNSISIF
Sbjct: 71 MNLVIMYMSGNSISIF 86

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170039511|ref|XP_001847576.1| transmembrane protein 85 [Culex quinquefasciatus] gi|167863053|gb|EDS26436.1| transmembrane protein 85 [Culex quinquefasciatus]

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 2  KWSVDFTSRAKS--DLPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQVPM 58
          KW +DF S+++S  D+ +PPG+ P    V S+V    D  +L++KK W++AL PIKQ PM
Sbjct: 11 KWQLDFASKSRSSGDIASPPGFNPSAGQVNSEVARDNDQSHLILKKSWDIALGPIKQFPM 70

Query: 59 NIVIMYMAGNSISIF 73
          N++IMYM+GNSISIF
Sbjct: 71 NLLIMYMSGNSISIF 85

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321468773|gb|EFX79756.1| hypothetical protein DAPPUDRAFT_230984 [Daphnia pulex]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 2/74 (2%)

Query: 2  KWSVDFTSRAKS--DLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMN 59
          KWS+D ++R KS  DL +PPGY P   +  ++   + D +LLIK+ W+VAL P+KQVPMN
Sbjct: 13 KWSIDLSNRNKSTCDLASPPGYLPSIATTVAESAKENDSSLLIKRSWDVALQPLKQVPMN 72

Query: 60 IVIMYMAGNSISIF 73
          + +MYM G+SISIF
Sbjct: 73 LFMMYMVGSSISIF 86

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195019280|ref|XP_001984948.1| GH14764 [Drosophila grimshawi] gi|193898430|gb|EDV97296.1| GH14764 [Drosophila grimshawi]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 2/72 (2%)

Query: 2  KWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIV 61
          KW++DF+    +D+P+PPGY P     Q++V    D  L+IKK W++AL P+KQ+PMN+ 
Sbjct: 11 KWALDFSVSKNADMPSPPGYNPTALVNQTEVVR--DQRLVIKKSWDLALGPLKQIPMNLF 68

Query: 62 IMYMAGNSISIF 73
          IMYM+GNSISIF
Sbjct: 69 IMYMSGNSISIF 80

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008277|ref|XP_002424933.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212508547|gb|EEB12195.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 5/77 (6%)

Query: 2  KWSVDFTSRAKSD----LPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQV 56
          KW++D  SR+K +    LP+PPGY      V ++ + ++D  +LL KK WEVAL P+KQV
Sbjct: 12 KWAIDLNSRSKPEKFVELPSPPGYSSSVAQVHTESSKESDTSHLLKKKSWEVALGPLKQV 71

Query: 57 PMNIVIMYMAGNSISIF 73
          PMN+ IMYMAG+SISIF
Sbjct: 72 PMNLFIMYMAGSSISIF 88

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195127772|ref|XP_002008342.1| GI11865 [Drosophila mojavensis] gi|195377784|ref|XP_002047667.1| GJ13560 [Drosophila virilis] gi|193919951|gb|EDW18818.1| GI11865 [Drosophila mojavensis] gi|194154825|gb|EDW70009.1| GJ13560 [Drosophila virilis]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)

Query: 2  KWSVDFTSRAKSDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPMNIV 61
          KW++DF     +D+P+PPGY P     Q++V    D  L+IKK W++AL P+KQ+PMN+ 
Sbjct: 11 KWALDFNVSKNADMPSPPGYNPTALVNQTEVVR--DQRLVIKKSWDLALGPLKQIPMNLF 68

Query: 62 IMYMAGNSISIF 73
          IMYM+GNSISIF
Sbjct: 69 IMYMSGNSISIF 80

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|94468588|gb|ABF18143.1| predicted membrane protein [Aedes aegypti]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 4/77 (5%)

Query: 1  MKWSVDFTSRAKS---DLPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQV 56
           KW +DFT R++    D+ +PPG+ P      S+V    D  +L++KK W++AL PIKQ 
Sbjct: 10 FKWQLDFTPRSRGSGGDIASPPGFNPSAGQTHSEVARDNDQSHLILKKSWDIALGPIKQF 69

Query: 57 PMNIVIMYMAGNSISIF 73
          PMN++IMYM+GNSISIF
Sbjct: 70 PMNLLIMYMSGNSISIF 86

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427782877|gb|JAA56890.1| Hypothetical protein [Rhipicephalus pulchellus]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 3/75 (4%)

Query: 2  KWSVDFTSRAK---SDLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAPIKQVPM 58
          KWS  F+ R     ++L +PPG+        S+ + +T+ NL++KK W+VALAP KQVPM
Sbjct: 15 KWSFAFSQRRADRVTELASPPGFSSSLGQGHSEASRETEANLIVKKSWDVALAPWKQVPM 74

Query: 59 NIVIMYMAGNSISIF 73
          N+ IMYMAGNSISIF
Sbjct: 75 NLFIMYMAGNSISIF 89

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157112268|ref|XP_001657468.1| hypothetical protein AaeL_AAEL000942 [Aedes aegypti] gi|108883741|gb|EAT47966.1| AAEL000942-PA [Aedes aegypti]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 4/77 (5%)

Query: 1  MKWSVDFTSRAK---SDLPAPPGYCPINNSVQSDVTNQTD-GNLLIKKCWEVALAPIKQV 56
           KW +DFT R++    D+ +PPG+ P      S+V    D  +L++KK W++AL PIKQ 
Sbjct: 10 FKWQLDFTPRSRNSGGDIASPPGFNPSAGQTHSEVARDNDQSHLILKKSWDIALGPIKQF 69

Query: 57 PMNIVIMYMAGNSISIF 73
          PMN++IMYM+GNSISIF
Sbjct: 70 PMNLLIMYMSGNSISIF 86

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
ZFIN|ZDB-GENE-040426-1891	189	emc4 "ER membrane protein comp	0.986	0.386	0.456	3.4e-13
UNIPROTKB|B5XB24	188	emc4 "ER membrane protein comp	0.986	0.388	0.444	1.5e-12
UNIPROTKB|Q5J8M3	183	EMC4 "ER membrane protein comp	0.945	0.382	0.416	8.2e-12
UNIPROTKB|Q5RC35	183	EMC4 "ER membrane protein comp	0.945	0.382	0.416	8.2e-12
MGI|MGI:1915282	183	Emc4 "ER membrane protein comp	0.945	0.382	0.416	8.2e-12
UNIPROTKB|Q3T0K8	183	EMC4 "ER membrane protein comp	0.945	0.382	0.416	1e-11
UNIPROTKB|F2Z5K1	183	EMC4 "Uncharacterized protein"	0.945	0.382	0.416	1e-11
UNIPROTKB|E2R5T1	183	EMC4 "Uncharacterized protein"	0.945	0.382	0.404	2.8e-11
UNIPROTKB|Q6GR43	180	emc4 "ER membrane protein comp	0.945	0.388	0.419	2.8e-11
UNIPROTKB|Q6PBF7	180	emc4 "ER membrane protein comp	0.945	0.388	0.419	2.8e-11

ZFIN|ZDB-GENE-040426-1891 emc4 "ER membrane protein complex subunit 4" [Danio rerio (taxid:7955)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 37/81 (45%), Positives = 52/81 (64%)

Query:     1 MKWSVDFT---SRAKSDLPAPPG--YCPINNS---VQSDVTNQTDGNLLIKKCWEVALAP 52
             MKW+V+ +   SR++SD     G    P+  S   V      + D NL+ K+CW+VAL P
Sbjct:    23 MKWAVELSLGNSRSRSDRQGKDGDVMYPVGYSDKPVPDTSVQEADRNLVEKRCWDVALGP 82

Query:    53 IKQVPMNIVIMYMAGNSISIF 73
             +KQ+PMN+ IMYM+GN+ISIF
Sbjct:    83 LKQIPMNLFIMYMSGNTISIF 103

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B5XB24 emc4 "ER membrane protein complex subunit 4" [Salmo salar (taxid:8030)]

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 36/81 (44%), Positives = 52/81 (64%)

Query:     1 MKWSVDFT---SRAKSDLPAPPG--YCPINNS---VQSDVTNQTDGNLLIKKCWEVALAP 52
             MKW+++ +   +R + D  +  G    PI  S   V      +TD NL+ K+CW+VAL P
Sbjct:    22 MKWALELSLGNARGRGDRQSNQGDVMYPIGYSDKPVPDTSIQETDKNLVEKRCWDVALGP 81

Query:    53 IKQVPMNIVIMYMAGNSISIF 73
             +KQ+PMN+ IMYM+GN+ISIF
Sbjct:    82 LKQIPMNLFIMYMSGNTISIF 102

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|Q5J8M3 EMC4 "ER membrane protein complex subunit 4" [Homo sapiens (taxid:9606)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/84 (41%), Positives = 52/84 (61%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR +SD  +       P GY  ++  V      +TD  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRGRSDRGSGQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0006915 "apoptotic process" evidence=IEA

GO:0072546 "ER membrane protein complex" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

UNIPROTKB|Q5RC35 EMC4 "ER membrane protein complex subunit 4" [Pongo abelii (taxid:9601)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/84 (41%), Positives = 52/84 (61%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR +SD  +       P GY  ++  V      +TD  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRGRSDRGSGQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

MGI|MGI:1915282 Emc4 "ER membrane protein complex subunit 4" [Mus musculus (taxid:10090)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 35/84 (41%), Positives = 52/84 (61%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR +SD  +       P GY  ++  V      +TD  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRGRSDRGSGQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0003674 "molecular_function" evidence=ND

GO:0006915 "apoptotic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO

GO:0072546 "ER membrane protein complex" evidence=ISO

UNIPROTKB|Q3T0K8 EMC4 "ER membrane protein complex subunit 4" [Bos taurus (taxid:9913)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR +SD          P GY  ++  V      +TD  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRGRSDRGGGQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0006915 "apoptotic process" evidence=IEA

UNIPROTKB|F2Z5K1 EMC4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 35/84 (41%), Positives = 51/84 (60%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR +SD          P GY  ++  V      +TD  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRGRSDRGGGQGDSLYPVGY--LDKQVPDTSVQETDRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|E2R5T1 EMC4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 34/84 (40%), Positives = 51/84 (60%)

Query:     2 KWSVDFT-----SRAKSDLPA-------PPGYCPINNSVQSDVTNQTDGNLLIKKCWEVA 49
             KW+++ +     SR++SD          P GY  ++  V      + D  L+ K+CW++A
Sbjct:    16 KWAIELSGPGGGSRSRSDRGGGQGDSLYPVGY--LDKQVPDTSVQEADRILVEKRCWDIA 73

Query:    50 LAPIKQVPMNIVIMYMAGNSISIF 73
             L P+KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LGPLKQIPMNLFIMYMAGNTISIF 97

GO:0072546 "ER membrane protein complex" evidence=IEA

UNIPROTKB|Q6GR43 emc4 "ER membrane protein complex subunit 4" [Xenopus laevis (taxid:8355)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 34/81 (41%), Positives = 49/81 (60%)

Query:     2 KWSVDFTS---RAKS------DLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAP 52
             KW+++F S   R +       D   P GY   +  V      ++D  L+ K+CW++AL P
Sbjct:    16 KWAIEFGSGGSRGRGERGGLQDSMYPVGYS--DKQVPDTSVQESDHILVEKRCWDIALGP 73

Query:    53 IKQVPMNIVIMYMAGNSISIF 73
             +KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LKQIPMNLFIMYMAGNTISIF 94

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|Q6PBF7 emc4 "ER membrane protein complex subunit 4" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 34/81 (41%), Positives = 49/81 (60%)

Query:     2 KWSVDFTS---RAKS------DLPAPPGYCPINNSVQSDVTNQTDGNLLIKKCWEVALAP 52
             KW+++F S   R +       D   P GY   +  V      ++D  L+ K+CW++AL P
Sbjct:    16 KWAIEFGSGGSRGRGERGGLQDSMYPVGYS--DKQVPDTSVQESDHILVEKRCWDIALGP 73

Query:    53 IKQVPMNIVIMYMAGNSISIF 73
             +KQ+PMN+ IMYMAGN+ISIF
Sbjct:    74 LKQIPMNLFIMYMAGNTISIF 94

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	74
pfam06417	124	pfam06417, DUF1077, Protein of unknown function (D	2e-15

>gnl|CDD|219016 pfam06417, DUF1077, Protein of unknown function (DUF1077)

 Score = 64.6 bits (158), Expect = 2e-15
 Identities = 19/44 (43%), Positives = 30/44 (68%)

Query: 30 SDVTNQTDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIF 73
             + +   +L +KK W++AL P K +PMN+ +MYM+GNS+ IF
Sbjct: 2  KQASKEESRHLKLKKAWDIALGPAKSLPMNLFMMYMSGNSLQIF 45

This family consists of several hypothetical eukaryotic proteins of unknown function. Length = 124

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
KOG3318|consensus	178		99.97
PF06417	124	DUF1077: Protein of unknown function (DUF1077); In	99.92

>KOG3318|consensus

Probab=99.97  E-value=1.5e-31  Score=186.68  Aligned_cols=73  Identities=41%  Similarity=0.906  Sum_probs=61.3

Q ss_pred             ccceecCCc----CCCCCCCCCCCCCCCCCCCCc--ccccchh--hHHHHHHHHHhhccccchhhHHHHHHhcCCccccc
Q psy15836          2 KWSVDFTSR----AKSDLPAPPGYCPINNSVQSD--VTNQTDG--NLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIF   73 (74)
Q Consensus         2 kW~~dl~~~----~~~~lp~PpGy~~~~~~~~~~--~~~~~~~--~L~~kkaWeiA~~P~K~ipMn~fMmyMsGnsiqIF   73 (74)
                      +|+++|.+.    ++.++|+||||.++....++.  +.+++|+  +|+.|||||+|++|+||||||+|||||+|||||||
T Consensus         9 ~Wa~~~~~~~~~~nsd~~~~PpGf~~~s~~~~~s~~a~r~~d~~~~L~~kkaWdiAl~P~K~iPMN~FmmYMaGnsvsIF   88 (178)
T KOG3318|consen    9 DWAVEFSDQSTVPNSDSIPSPPGFSRKSLVQQTSAEADRKKDQEATLVLKKAWDIALGPLKNIPMNLFMMYMAGNSVSIF   88 (178)
T ss_pred             chHHHhCCcccCCcccCCCCCCCccccccccchHHHHhhhhhHHHHHHHHHHHHHhhChHhhccHHHHHHHHcCCceEEe
Confidence            799999995    467789999999887655432  2233333  59999999999999999999999999999999999


Q ss_pred             C
Q psy15836         74 W   74 (74)
Q Consensus        74 ~   74 (74)
                      |
T Consensus        89 p   89 (178)
T KOG3318|consen   89 P   89 (178)
T ss_pred             H
Confidence            7

>PF06417 DUF1077: Protein of unknown function (DUF1077); InterPro: IPR009445 This family consists of several hypothetical eukaryotic proteins of unknown function

Probab=99.92  E-value=7.3e-26  Score=151.38  Aligned_cols=39  Identities=54%  Similarity=0.997  Sum_probs=36.7

Q ss_pred             chhhHHHHHHHHHhhccccchhhHHHHHHhcCCcccccC
Q psy15836         36 TDGNLLIKKCWEVALAPIKQVPMNIVIMYMAGNSISIFW   74 (74)
Q Consensus        36 ~~~~L~~kkaWeiA~~P~K~ipMn~fMmyMsGnsiqIF~   74 (74)
                      ++.+|+.|||||+|++|+||||||+||||||||||||||
T Consensus         7 ~~~~L~~KkAWeiA~~P~K~ipMn~FMmyMsGnsi~IFs   45 (124)
T PF06417_consen    7 QQDALKVKKAWEIALGPAKSIPMNLFMMYMSGNSIQIFS   45 (124)
T ss_pred             HHHHHHHHHHHHHHhhHHHhhhHHHHHHHHhCCcchhhh
Confidence            344699999999999999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00