Psyllid ID: psy15921

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
Protein Sequence
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Secondary Structure (PSIPRED)
cEEcEEEccHHHHHHcccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccEEEEEccHHHHHccccccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEEcc
Coil and Loop (DISEMBL)
MIITFLSVHSRailsnqdilpstplealfhndfwgtpikspsshgsyrplsvLTFRLNYawsgfrpfayhLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALfgvhpvhteAVAGLVGRADILSCIFYLVAILMFvhlpprsilRLKEIYGVTLKP
Flexible Loop (DISEMBL)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVhlpprsilrlkeiygvtlkp
Low Complexity Region (SEG)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Disordered region (IsUnstruct)
*IITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKS***HGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVT***
Disordered Region (DISOPRED)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Disordered Region (DISEMBL)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Disordered Region (DISPRO)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MIITFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGVTLKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	158	2.2.26 [Sep-21-2011]
Q9VQE9	859	Transmembrane and TPR rep	yes	N/A	0.841	0.154	0.548	5e-36
Q6ZXV5	915	Transmembrane and TPR rep	yes	N/A	0.791	0.136	0.523	5e-34
Q8BRH0	920	Transmembrane and TPR rep	yes	N/A	0.791	0.135	0.515	1e-33
Q9V3X5	938	Transmembrane and TPR rep	no	N/A	0.854	0.143	0.507	3e-32
Q6DCD5	836	Transmembrane and TPR rep	N/A	N/A	0.727	0.137	0.504	5e-28
Q56A06	836	Transmembrane and TPR rep	no	N/A	0.759	0.143	0.491	8e-28
Q8N394	836	Transmembrane and TPR rep	no	N/A	0.759	0.143	0.491	3e-27
Q8BG19	741	Transmembrane and TPR rep	no	N/A	0.854	0.182	0.456	1e-26
Q3UV71	942	Transmembrane and TPR rep	no	N/A	0.715	0.119	0.521	2e-26
Q7K4B6	926	Transmembrane and TPR rep	no	N/A	0.797	0.136	0.465	2e-26

>sp|Q9VQE9|TMTC1_DROME Transmembrane and TPR repeat-containing protein CG31690 OS=Drosophila melanogaster GN=CG31690 PE=2 SV=3

 Score =  149 bits (377), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAIL+N D+  + PL  L  NDFWGTP+    SHGS+RPL VL+FRLNY   G 
Sbjct: 42  FVYDDRRAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGM 101

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P  YHL N+ LHC+ T LV L+A ++LP+      A ALF VHP HTEAVAGLVGRAD+
Sbjct: 102 TPLGYHLVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADL 161

Query: 125 LSCIFYLVAILMF 137
            SC+ YL+A L +
Sbjct: 162 ASCVCYLLAYLSY 174

Drosophila melanogaster (taxid: 7227)

>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens GN=TMTC3 PE=1 SV=2

 Score =  143 bits (360), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/126 (52%), Positives = 90/126 (71%), Gaps = 1/126 (0%)

Query: 12  AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
           AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct: 35  AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query: 72  TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
            N+  H +  +++ L    +   ++++ +AS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct: 95  LNMIFHAV-VSVIFLKVCKLFLDNKSSVIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query: 132 VAILMF 137
            A L +
Sbjct: 154 AAFLSY 159

Homo sapiens (taxid: 9606)

>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus GN=Tmtc3 PE=2 SV=2

 Score =  142 bits (357), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 1/126 (0%)

Query: 12  AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
           AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct: 40  AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query: 72  TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
            N   H +  +++ L    +    R++ +A+ LF VHP+HTEAV G+VGRA++LS +F+L
Sbjct: 100 LNTVFHAV-VSVIFLKVCRLFLDKRSSMIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query: 132 VAILMF 137
            A L +
Sbjct: 159 AAFLSY 164

Mus musculus (taxid: 10090)

>sp|Q9V3X5|TMTC2_DROME Transmembrane and TPR repeat-containing protein CG4341 OS=Drosophila melanogaster GN=CG4341 PE=2 SV=1

 Score =  137 bits (345), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 1/136 (0%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNY-AWSG 63
           F+    RAIL+N D+   TP +  F NDFWGTP+    SHGS+RPL VL+FRLNY    G
Sbjct: 54  FVYDDRRAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGG 113

Query: 64  FRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRAD 123
           F P+ +HL N  LHC+ TALV  +A ++L +  A   A ALF  HP+HTEAVAG+VGRAD
Sbjct: 114 FAPWGFHLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVVGRAD 173

Query: 124 ILSCIFYLVAILMFVH 139
           + +C+ YL+  L ++ 
Sbjct: 174 LAACVCYLLTYLSYLR 189

Drosophila melanogaster (taxid: 7227)

>sp|Q6DCD5|TMTC2_XENLA Transmembrane and TPR repeat-containing protein 2 OS=Xenopus laevis GN=tmtc2 PE=2 SV=1

 Score =  123 bits (308), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/115 (50%), Positives = 74/115 (64%)

Query: 10  SRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAY 69
           SRAI +NQD+LP TP   +F NDFWGT +    SH SYRPL  L+FRLNY + G  P+ Y
Sbjct: 28  SRAIKTNQDLLPETPWNHIFFNDFWGTLLTHSGSHKSYRPLCTLSFRLNYLFGGLDPWNY 87

Query: 70  HLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
           HL N+ LH   T L   L  ++  +     +A  LF  HP+HTEAV+G+VGRAD+
Sbjct: 88  HLVNVLLHSAVTGLFTNLCKALFGSGCWTLIAGLLFASHPIHTEAVSGIVGRADV 142

Xenopus laevis (taxid: 8355)

>sp|Q56A06|TMTC2_MOUSE Transmembrane and TPR repeat-containing protein 2 OS=Mus musculus GN=Tmtc2 PE=2 SV=1

 Score =  122 bits (306), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 78/120 (65%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F    SRAI +NQD+LP TP   +F+NDFWGT +    SH SYRPL  L+FRLN+A  G 
Sbjct: 23  FCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGL 82

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P++YHL N+ LH   T L    + ++L      ++A  +F  HP+HTEAVAG+VGRAD+
Sbjct: 83  NPWSYHLVNVLLHAAVTGLFTRFSKALLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADV 142

Mus musculus (taxid: 10090)

>sp|Q8N394|TMTC2_HUMAN Transmembrane and TPR repeat-containing protein 2 OS=Homo sapiens GN=TMTC2 PE=2 SV=1

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 77/120 (64%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F    SRAI +NQD+LP TP   +F+NDFWGT +    SH SYRPL  L+FRLN+A  G 
Sbjct: 23  FCYDDSRAIKTNQDLLPETPWTHIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGL 82

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P++YHL N+ LH   T L    +  +L      ++A  +F  HP+HTEAVAG+VGRAD+
Sbjct: 83  NPWSYHLVNVLLHAAVTGLFTSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADV 142

Homo sapiens (taxid: 9606)

>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus GN=Tmtc4 PE=2 SV=1

 Score =  119 bits (297), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 95/151 (62%), Gaps = 16/151 (10%)

Query: 4   TFLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWS- 62
            F+   S AI++N+D+   TPL  L+H+DFWG+ + S +SH SYRPL+VLTFR+NY  S 
Sbjct: 40  DFVFDDSEAIVNNKDLQSDTPLGDLWHHDFWGSKLSSNTSHKSYRPLTVLTFRINYYLSG 99

Query: 63  GFRPFAYHLTNIGLHCLCTALVHLLALSVL-----------PTH---RAAWVASALFGVH 108
           GF P  +H+ NI LH   + L+ L   SVL             H   RA+ +A+ LF VH
Sbjct: 100 GFHPVGFHVVNILLHGSISILM-LDVFSVLFGGLQYTGKGQRVHLAPRASLLATLLFAVH 158

Query: 109 PVHTEAVAGLVGRADILSCIFYLVAILMFVH 139
           PVHTE VAG+VGRAD+L  +F+L++ L +  
Sbjct: 159 PVHTECVAGVVGRADLLCALFFLLSFLGYCQ 189

Mus musculus (taxid: 10090)

>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus GN=Tmtc1 PE=2 SV=2

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 77/115 (66%), Gaps = 2/115 (1%)

Query: 12  AILSNQDILPSTPLE-ALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYH 70
           AI++N D+ P TPL  A+F NDFWG  +   +SH SYRPL VL+FRLN   +G  PF +H
Sbjct: 55  AIVNNPDVRPGTPLRWAIFANDFWGKGLADSTSHKSYRPLCVLSFRLNIFLTGMNPFYFH 114

Query: 71  LTNIGLHCLCT-ALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
             N+ LHCL T  L++    +V      A+V + LF VHPVHTEAVAG+VGRAD+
Sbjct: 115 AVNVILHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVAGIVGRADV 169

Mus musculus (taxid: 10090)

>sp|Q7K4B6|TMTC3_DROME Transmembrane and TPR repeat-containing protein CG4050 OS=Drosophila melanogaster GN=CG4050 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 84/146 (57%), Gaps = 20/146 (13%)

Query: 12  AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
           AI  N+D+ P TPL  +F NDFWGTP++   SH SYRPL+VLTFR NY      PF YHL
Sbjct: 63  AIRDNKDLRPHTPLINVFLNDFWGTPMRKEQSHKSYRPLTVLTFRFNYLLHALEPFGYHL 122

Query: 72  TNIGL--------HCLCTALVHLLALS------------VLPTHRAAWVASALFGVHPVH 111
            N+ L          +C  L+   A S            V   +  A+VAS LF VHPVH
Sbjct: 123 VNLLLHLSVCLLWRRVCRLLLRQCAASGSNAISAPSSSSVSQLNTCAFVASLLFAVHPVH 182

Query: 112 TEAVAGLVGRADILSCIFYLVAILMF 137
           TEAV G+VGRA++LS I +L A L +
Sbjct: 183 TEAVTGVVGRAELLSSICFLAAFLSY 208

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
242010941	218	smile protein, putative [Pediculus human	0.848	0.614	0.562	6e-37
189236217	913	PREDICTED: similar to AT30101p [Triboliu	0.848	0.146	0.554	1e-36
270005776	851	hypothetical protein TcasGA2_TC007885 [T	0.848	0.157	0.554	2e-36
345482770	854	PREDICTED: transmembrane and TPR repeat-	0.848	0.156	0.562	1e-35
157124099	497	hypothetical protein AaeL_AAEL009761 [Ae	0.816	0.259	0.527	1e-34
170029421	246	conserved hypothetical protein [Culex qu	0.810	0.520	0.546	1e-34
193697464	814	PREDICTED: transmembrane and TPR repeat-	0.835	0.162	0.526	2e-34
19528215	849	AT30101p [Drosophila melanogaster]	0.841	0.156	0.548	3e-34
288558778	859	MIP14901p [Drosophila melanogaster]	0.841	0.154	0.548	3e-34
281364285	859	CG31690 [Drosophila melanogaster] gi|347	0.841	0.154	0.548	3e-34

>gi|242010941|ref|XP_002426216.1| smile protein, putative [Pediculus humanus corporis] gi|212510267|gb|EEB13478.1| smile protein, putative [Pediculus humanus corporis]

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 98/135 (72%), Gaps = 1/135 (0%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYA-WSG 63
           F+    RAIL+NQD+LP+T   ++++NDFWGTPI S +SHGSYRPL VLTFRLNY    G
Sbjct: 24  FVYDDRRAILNNQDVLPTTSFSSIWYNDFWGTPIASSNSHGSYRPLCVLTFRLNYILGGG 83

Query: 64  FRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRAD 123
           FRP+ +HL N+ LH LCT LV  LA      +   +V   LF +HP+HTEAVAG+VGRAD
Sbjct: 84  FRPYGFHLVNVLLHSLCTYLVVKLARKFFNKNFPVFVCGFLFSLHPIHTEAVAGIVGRAD 143

Query: 124 ILSCIFYLVAILMFV 138
           I SCIFY+++ L ++
Sbjct: 144 IASCIFYIISFLSYI 158

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189236217|ref|XP_971516.2| PREDICTED: similar to AT30101p [Tribolium castaneum]

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAILSN D+LP TP   L  NDFWGTP+    SHGSYRPL VLTFRLNY   GF
Sbjct: 135 FVYDDRRAILSNPDLLPKTPWARLLENDFWGTPLSDSGSHGSYRPLCVLTFRLNYLLGGF 194

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAA---WVASALFGVHPVHTEAVAGLVGR 121
           +P+ YHL N+ LHCL TAL+  LA  VLP  +++    +   +F  HP+HTEAVAG+VGR
Sbjct: 195 QPWGYHLVNVLLHCLATALLVKLARQVLPKSKSSVGPAITGLIFATHPIHTEAVAGVVGR 254

Query: 122 ADILSCIFYLVAILMFV 138
           AD+ +C FYL++ L +V
Sbjct: 255 ADLAACNFYLLSFLAYV 271

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005776|gb|EFA02224.1| hypothetical protein TcasGA2_TC007885 [Tribolium castaneum]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 95/137 (69%), Gaps = 3/137 (2%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAILSN D+LP TP   L  NDFWGTP+    SHGSYRPL VLTFRLNY   GF
Sbjct: 218 FVYDDRRAILSNPDLLPKTPWARLLENDFWGTPLSDSGSHGSYRPLCVLTFRLNYLLGGF 277

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAA---WVASALFGVHPVHTEAVAGLVGR 121
           +P+ YHL N+ LHCL TAL+  LA  VLP  +++    +   +F  HP+HTEAVAG+VGR
Sbjct: 278 QPWGYHLVNVLLHCLATALLVKLARQVLPKSKSSVGPAITGLIFATHPIHTEAVAGVVGR 337

Query: 122 ADILSCIFYLVAILMFV 138
           AD+ +C FYL++ L +V
Sbjct: 338 ADLAACNFYLLSFLAYV 354

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345482770|ref|XP_001599238.2| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Nasonia vitripennis]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/135 (56%), Positives = 92/135 (68%), Gaps = 1/135 (0%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAIL+N D+ PSTP   L  NDFWGTP++   SHGSYRPL V T+RLNY   G 
Sbjct: 24  FVYDDRRAILTNADLKPSTPWYRLLENDFWGTPLRERGSHGSYRPLCVATYRLNYLLGGL 83

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHR-AAWVASALFGVHPVHTEAVAGLVGRAD 123
            P  YHL N+ LH LCTALV  +A  VLP  R A  +A  LF VHP+H+EAVAG+VGRAD
Sbjct: 84  EPLGYHLVNVLLHALCTALVVRIAKKVLPGQRLAQAIAGLLFAVHPIHSEAVAGIVGRAD 143

Query: 124 ILSCIFYLVAILMFV 138
           +L+C+F   A L +V
Sbjct: 144 LLACLFAQGAFLFYV 158

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124099|ref|XP_001660330.1| hypothetical protein AaeL_AAEL009761 [Aedes aegypti] gi|108874112|gb|EAT38337.1| AAEL009761-PA [Aedes aegypti]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/129 (52%), Positives = 89/129 (68%)

Query: 11  RAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYH 70
           RAIL N D+L S     +  NDFWGTP+    SHGSYRPL V +F++NY   GF+P  YH
Sbjct: 6   RAILGNPDVLGSNGWYQMLQNDFWGTPLTDSGSHGSYRPLCVASFKINYLLDGFKPLGYH 65

Query: 71  LTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFY 130
           L N+ LHC+ TALV  LA  +LP+     +A  LF  HP+HTEAVAG+VGRAD+ +C+FY
Sbjct: 66  LVNVLLHCMATALVVRLARHILPSRYGVAIAGLLFAAHPIHTEAVAGVVGRADLTACVFY 125

Query: 131 LVAILMFVH 139
           L+A+L ++ 
Sbjct: 126 LLALLAYIR 134

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170029421|ref|XP_001842591.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167862422|gb|EDS25805.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/128 (54%), Positives = 91/128 (71%)

Query: 11  RAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYH 70
           RAIL N D+L ST    +  NDFWGTP+    SHGSYRPL+V +F+LN+   GF+P  YH
Sbjct: 5   RAILGNPDVLSSTGWYQMLQNDFWGTPLTDSGSHGSYRPLAVASFKLNHLLDGFKPLGYH 64

Query: 71  LTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFY 130
           L N+ LHCL TALV  L   ++P+   A +A  LF  HPVHTEAVAG+VGRAD+ +C+FY
Sbjct: 65  LGNVLLHCLATALVLRLGRHLIPSRTGAAIAGLLFAAHPVHTEAVAGVVGRADLTACVFY 124

Query: 131 LVAILMFV 138
           L+A+L ++
Sbjct: 125 LLAVLAYI 132

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193697464|ref|XP_001944336.1| PREDICTED: transmembrane and TPR repeat-containing protein CG4341-like [Acyrthosiphon pisum]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 101/133 (75%), Gaps = 1/133 (0%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+   +RAI++N+DI PST    L+ NDFWGTP+ + +SHGSYRP++VLT+RLNY +SG 
Sbjct: 44  FVYDDNRAIIANEDIRPSTSGSNLWWNDFWGTPMGTGNSHGSYRPITVLTYRLNYRFSGL 103

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
           +  +YH+TN+ LH L T LV  +A +V  + R A +++ALF VHPVH +AVA +VGRAD+
Sbjct: 104 KATSYHVTNVALHGLATGLVLSVARTV-TSRRGALLSAALFAVHPVHADAVASVVGRADV 162

Query: 125 LSCIFYLVAILMF 137
           LSC+F+L++ L +
Sbjct: 163 LSCVFFLLSFLCY 175

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|19528215|gb|AAL90222.1| AT30101p [Drosophila melanogaster]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAIL+N D+  + PL  L  NDFWGTP+    SHGS+RPL VL+FRLNY   G 
Sbjct: 32  FVYDDRRAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGM 91

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P  YHL N+ LHC+ T LV L+A ++LP+      A ALF VHP HTEAVAGLVGRAD+
Sbjct: 92  TPLGYHLVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADL 151

Query: 125 LSCIFYLVAILMF 137
            SC+ YL+A L +
Sbjct: 152 ASCVCYLLAYLSY 164

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|288558778|gb|ADC53520.1| MIP14901p [Drosophila melanogaster]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAIL+N D+  + PL  L  NDFWGTP+    SHGS+RPL VL+FRLNY   G 
Sbjct: 42  FVYDDRRAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGM 101

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P  YHL N+ LHC+ T LV L+A ++LP+      A ALF VHP HTEAVAGLVGRAD+
Sbjct: 102 TPLGYHLVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADL 161

Query: 125 LSCIFYLVAILMF 137
            SC+ YL+A L +
Sbjct: 162 ASCVCYLLAYLSY 174

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281364285|ref|NP_995615.2| CG31690 [Drosophila melanogaster] gi|347595774|sp|Q9VQE9.3|TMTC1_DROME RecName: Full=Transmembrane and TPR repeat-containing protein CG31690 gi|272406866|gb|AAS64621.2| CG31690 [Drosophila melanogaster]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/133 (54%), Positives = 90/133 (67%)

Query: 5   FLSVHSRAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGF 64
           F+    RAIL+N D+  + PL  L  NDFWGTP+    SHGS+RPL VL+FRLNY   G 
Sbjct: 42  FVYDDRRAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGM 101

Query: 65  RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI 124
            P  YHL N+ LHC+ T LV L+A ++LP+      A ALF VHP HTEAVAGLVGRAD+
Sbjct: 102 TPLGYHLVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADL 161

Query: 125 LSCIFYLVAILMF 137
            SC+ YL+A L +
Sbjct: 162 ASCVCYLLAYLSY 174

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	158
FB|FBgn0051690	859	CG31690 [Drosophila melanogast	0.803	0.147	0.566	2.5e-34
UNIPROTKB|F1SPX9	650	TMTC3 "Uncharacterized protein	0.848	0.206	0.503	2.5e-32
UNIPROTKB|E2QUG9	915	TMTC3 "Uncharacterized protein	0.848	0.146	0.510	4.1e-32
UNIPROTKB|Q6ZXV5	915	TMTC3 "Transmembrane and TPR r	0.848	0.146	0.503	1.8e-31
UNIPROTKB|E1BG63	920	TMTC3 "Uncharacterized protein	0.848	0.145	0.503	2.3e-31
FB|FBgn0028481	938	CG4341 [Drosophila melanogaste	0.822	0.138	0.522	3.1e-31
MGI|MGI:3036255	920	Tmtc3 "transmembrane and tetra	0.848	0.145	0.496	6.3e-31
RGD|1306351	920	Tmtc3 "transmembrane and tetra	0.848	0.145	0.496	1.3e-30
UNIPROTKB|F8W044	148	TMTC3 "Transmembrane and TPR r	0.721	0.770	0.530	1.6e-29
UNIPROTKB|E1C3P5	921	TMTC3 "Uncharacterized protein	0.791	0.135	0.523	2e-29

FB|FBgn0051690 CG31690 [Drosophila melanogaster (taxid:7227)]

 Score = 382 (139.5 bits), Expect = 2.5e-34, P = 2.5e-34
 Identities = 72/127 (56%), Positives = 88/127 (69%)

Query:    11 RAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYH 70
             RAIL+N D+  + PL  L  NDFWGTP+    SHGS+RPL VL+FRLNY   G  P  YH
Sbjct:    48 RAILANGDVTGARPLANLLRNDFWGTPLVDSGSHGSWRPLCVLSFRLNYLAGGMTPLGYH 107

Query:    71 LTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFY 130
             L N+ LHC+ T LV L+A ++LP+      A ALF VHP HTEAVAGLVGRAD+ SC+ Y
Sbjct:   108 LVNVMLHCVATWLVFLVARTLLPSRMGVLAAGALFAVHPAHTEAVAGLVGRADLASCVCY 167

Query:   131 LVAILMF 137
             L+A L +
Sbjct:   168 LLAYLSY 174

GO:0016262 "protein N-acetylglucosaminyltransferase activity" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|F1SPX9 TMTC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 360 (131.8 bits), Expect = 2.5e-32, P = 2.5e-32
 Identities = 69/137 (50%), Positives = 95/137 (69%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ P+TPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY +S  +P +YHL
Sbjct:    40 AILDNKDLHPTTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 99

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N+  H +  +++ L    +   +R++ +AS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct:   100 LNMMFHAV-VSVIFLKVCKLFLDNRSSMIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 158

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   159 AAFLSYTKSKGPDNSIV 175

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|E2QUG9 TMTC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 362 (132.5 bits), Expect = 4.1e-32, P = 4.1e-32
 Identities = 70/137 (51%), Positives = 95/137 (69%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY +S  +P +YHL
Sbjct:    35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELKPMSYHL 94

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N+  H +  +++ L    +   +R++ +AS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct:    95 LNMIFHAV-VSVIFLKVCKLFLDNRSSMIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   154 AAFLSYTKSKGPDNSIV 170

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

UNIPROTKB|Q6ZXV5 TMTC3 "Transmembrane and TPR repeat-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 356 (130.4 bits), Expect = 1.8e-31, P = 1.8e-31
 Identities = 69/137 (50%), Positives = 94/137 (68%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct:    35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N+  H +  +++ L    +   ++++ +AS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct:    95 LNMIFHAV-VSVIFLKVCKLFLDNKSSVIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   154 AAFLSYTRSKGPDNSII 170

GO:0016021 "integral to membrane" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

UNIPROTKB|E1BG63 TMTC3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 355 (130.0 bits), Expect = 2.3e-31, P = 2.3e-31
 Identities = 69/137 (50%), Positives = 94/137 (68%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY +S   P +YHL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELTPMSYHL 99

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N+  H +  +++ L    +   ++++ +AS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct:   100 LNMIFHAV-VSVIFLKVCRLFLNNQSSMIASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 158

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   159 AAFLSYTKSKGPDNSIV 175

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0009791 "post-embryonic development" evidence=IEA

FB|FBgn0028481 CG4341 [Drosophila melanogaster (taxid:7227)]

 Score = 354 (129.7 bits), Expect = 3.1e-31, P = 3.1e-31
 Identities = 69/132 (52%), Positives = 91/132 (68%)

Query:    11 RAILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYA-WSGFRPFAY 69
             RAIL+N D+   TP +  F NDFWGTP+    SHGS+RPL VL+FRLNY    GF P+ +
Sbjct:    60 RAILANADVSGGTPWQRSFSNDFWGTPLTDSGSHGSWRPLCVLSFRLNYLIGGGFAPWGF 119

Query:    70 HLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIF 129
             HL N  LHC+ TALV  +A ++L +  A   A ALF  HP+HTEAVAG+VGRAD+ +C+ 
Sbjct:   120 HLVNNLLHCVATALVVRVARTLLASVWAVLAAGALFAAHPIHTEAVAGVVGRADLAACVC 179

Query:   130 YLVAILMFV-HL 140
             YL+  L ++ H+
Sbjct:   180 YLLTYLSYLRHM 191

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:3036255 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Mus musculus (taxid:10090)]

 Score = 351 (128.6 bits), Expect = 6.3e-31, P = 6.3e-31
 Identities = 68/137 (49%), Positives = 92/137 (67%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N   H +  +++ L    +    R++ +A+ LF VHP+HTEAV G+VGRA++LS +F+L
Sbjct:   100 LNTVFHAV-VSVIFLKVCRLFLDKRSSMIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   159 AAFLSYTKSKGPDNSIV 175

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009791 "post-embryonic development" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=IMP

GO:0030324 "lung development" evidence=IMP

GO:0048286 "lung alveolus development" evidence=IMP

GO:0048747 "muscle fiber development" evidence=IMP

GO:0060447 "bud outgrowth involved in lung branching" evidence=IMP

RGD|1306351 Tmtc3 "transmembrane and tetratricopeptide repeat containing 3" [Rattus norvegicus (taxid:10116)]

 Score = 348 (127.6 bits), Expect = 1.3e-30, P = 1.3e-30
 Identities = 68/137 (49%), Positives = 91/137 (66%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct:    40 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 99

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N   H +  +++ L    +    R + +A+ LF VHP+HTEAV G+VGRA++LS +F+L
Sbjct:   100 LNTVFHAV-VSVIFLKVCRLFLDKRGSVIAALLFAVHPIHTEAVTGVVGRAELLSSVFFL 158

Query:   132 VAILMFVHL--PPRSIL 146
              A L +     P  SI+
Sbjct:   159 AAFLSYTKSKGPDNSIV 175

GO:0009791 "post-embryonic development" evidence=IEA;ISO

GO:0010468 "regulation of gene expression" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030154 "cell differentiation" evidence=ISO

GO:0030324 "lung development" evidence=ISO

GO:0048286 "lung alveolus development" evidence=IEA;ISO

GO:0048747 "muscle fiber development" evidence=IEA;ISO

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA;ISO

UNIPROTKB|F8W044 TMTC3 "Transmembrane and TPR repeat-containing protein 3" [Homo sapiens (taxid:9606)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 61/115 (53%), Positives = 83/115 (72%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY  S  +P +YHL
Sbjct:    35 AILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLLSELKPMSYHL 94

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILS 126
              N+  H +  +++ L    +   ++++ +AS LF VHP+HTEAV G+VGRA++LS
Sbjct:    95 LNMIFHAV-VSVIFLKVCKLFLDNKSSVIASLLFAVHPIHTEAVTGVVGRAELLS 148

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

UNIPROTKB|E1C3P5 TMTC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 66/126 (52%), Positives = 87/126 (69%)

Query:    12 AILSNQDILPSTPLEALFHNDFWGTPIKSPSSHGSYRPLSVLTFRLNYAWSGFRPFAYHL 71
             AIL N+D+ PSTPL+ LF NDFWGTP+    SH SYRPL+VLTFRLNY +S     +YH 
Sbjct:    35 AILDNKDLHPSTPLKNLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYLFSELNAVSYHF 94

Query:    72 TNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYL 131
              N+  H +   +V L    +   ++++ VAS LF VHP+HTEAV G+VGRA++LS IF+L
Sbjct:    95 LNLIFHGV-VCVVFLKVCKLFLDNQSSIVASLLFAVHPIHTEAVTGVVGRAELLSSIFFL 153

Query:   132 VAILMF 137
              A L +
Sbjct:   154 AAFLSY 159

GO:0009791 "post-embryonic development" evidence=IEA

GO:0010468 "regulation of gene expression" evidence=IEA

GO:0048286 "lung alveolus development" evidence=IEA

GO:0048747 "muscle fiber development" evidence=IEA

GO:0060447 "bud outgrowth involved in lung branching" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VQE9	TMTC1_DROME	No assigned EC number	0.5488	0.8417	0.1548	yes	N/A
Q6ZXV5	TMTC3_HUMAN	No assigned EC number	0.5238	0.7911	0.1366	yes	N/A
Q8BRH0	TMTC3_MOUSE	No assigned EC number	0.5158	0.7911	0.1358	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	158
PF13231	159	PMT_2: Dolichyl-phosphate-mannose-protein mannosyl	98.94
PF02366	245	PMT: Dolichyl-phosphate-mannose-protein mannosyltr	98.38
TIGR03663	439	conserved hypothetical protein TIGR03663. Members	98.17
COG1807	535	ArnT 4-amino-4-deoxy-L-arabinose transferase and r	97.84
PRK13279	552	arnT 4-amino-4-deoxy-L-arabinose transferase; Prov	97.79
PF11028	178	DUF2723: Protein of unknown function (DUF2723); In	96.96
PF10131	616	PTPS_related: 6-pyruvoyl-tetrahydropterin synthase	96.76
COG1928	699	PMT1 Dolichyl-phosphate-mannose--protein O-mannosy	96.55
TIGR03766	483	conserved hypothetical integral membrane protein.	96.42
PF04188	443	Mannosyl_trans2: Mannosyltransferase (PIG-V)); Int	96.23
COG5617	801	Predicted integral membrane protein [Function unkn	96.0
KOG2647|consensus	444		95.72
COG5305	552	Predicted membrane protein [Function unknown]	94.81
PF09852	449	DUF2079: Predicted membrane protein (DUF2079); Int	94.12
COG4745	556	Predicted membrane-bound mannosyltransferase [Post	93.16
COG4346	438	Predicted membrane-bound dolichyl-phosphate-mannos	90.81
PF02516	483	STT3: Oligosaccharyl transferase STT3 subunit; Int	89.84
KOG3359|consensus	723		88.62
PF09594	241	DUF2029: Protein of unknown function (DUF2029); In	85.51
COG1287	773	Uncharacterized membrane protein, required for N-l	83.45
PF14264	319	Glucos_trans_II: Glucosyl transferase GtrII	80.24

>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase

Probab=98.94  E-value=8.9e-09  Score=76.60  Aligned_cols=103  Identities=28%  Similarity=0.365  Sum_probs=90.7

Q ss_pred             hhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHH
Q psy15921         49 PLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCI  128 (158)
Q Consensus        49 PL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~l  128 (158)
                      |+.......-..++|.++++.|+.|++.+.+....+|.+.|+..+ +..|.++++++++-|.......  ..++|.+..+
T Consensus         4 Pl~~~~~~~~~~l~G~~~~~~~~~~~l~~~~~~~~~y~i~r~~~~-~~~a~~~~l~~~~~p~~~~~~~--~~~~~~~~~~   80 (159)
T PF13231_consen    4 PLYFLLLALFFKLFGDSVWALRLFNILFSLLTLLLIYLIARRLFG-RRAALIAALLLALSPMFIFYSA--SARPDMLLLF   80 (159)
T ss_pred             hHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-chHHHHHHHHHHHhHHHHHHHH--HHhHHHHHHH
Confidence            777777888899999999999999999999999999999999988 6899999999999997666544  6788999999


Q ss_pred             HHHHHHHHHHhcCchhhHHHHHHHhh
Q psy15921        129 FYLVAILMFVHLPPRSILRLKEIYGV  154 (158)
Q Consensus       129 F~L~al~~ylr~~~~~~~r~~~~~~~  154 (158)
                      |.+++++++.|+.++++.|...+.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l  106 (159)
T PF13231_consen   81 FFLLALYAFYRYIKSKKWRWWILAGL  106 (159)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHH
Confidence            99999999999999887776655554

>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=98.38  E-value=2.2e-06  Score=69.47  Aligned_cols=95  Identities=22%  Similarity=0.276  Sum_probs=82.6

Q ss_pred             CCcchhHhhhhhhhhhhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhh
Q psy15921         45 GSYRPLSVLTFRLNYAWSG-FRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRAD  123 (158)
Q Consensus        45 ~~yRPL~~ls~~l~~~l~G-~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~  123 (158)
                      ..|.|.....-...+..+| .+.++.|+.|.+.-.+.+.++|.+.|++.+++..|++++++++..|....-  --....|
T Consensus        60 ~~~p~~~~~~~~~~~~~~~~~~~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~--sr~~~~D  137 (245)
T PF02366_consen   60 FGYPPLYYWISAIGFYYFGSVNYWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQ--SRYALLD  137 (245)
T ss_pred             hcccchhhHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHH--HHHHhhH
Confidence            3466777766666677788 799999999999999999999999999999999999999999999977654  4457789


Q ss_pred             HHHHHHHHHHHHHHHhcC
Q psy15921        124 ILSCIFYLVAILMFVHLP  141 (158)
Q Consensus       124 lLa~lF~L~al~~ylr~~  141 (158)
                      ....+|.+++++|+.++.
T Consensus       138 ~~l~~f~~la~~~~~~~~  155 (245)
T PF02366_consen  138 SILLFFILLAIYCLLRWY  155 (245)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999993

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane

>TIGR03663 conserved hypothetical protein TIGR03663

Probab=98.17  E-value=1.1e-05  Score=71.89  Aligned_cols=103  Identities=17%  Similarity=0.100  Sum_probs=87.0

Q ss_pred             hhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHH
Q psy15921         49 PLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCI  128 (158)
Q Consensus        49 PL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~l  128 (158)
                      |+....-++-+.+||.+.+..|+.+.++..+ ..+++.+.++..++ ..++++|++.++.|..+..  ....+.|.+..+
T Consensus        53 Pll~wl~A~~~~lFG~se~a~RL~~aL~g~~-v~l~~~~~r~~~~~-~~al~AAllla~sp~~~~~--sr~~~~D~~l~~  128 (439)
T TIGR03663        53 PFLYHITAAVFHLFGISDATARLLPAVFGVL-LPLTAWLYRKRLGD-NEVLWAAVLLAFSPVMVYY--SRFMRNDIFVAF  128 (439)
T ss_pred             CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH-HHHHHHHHHHHcCc-HHHHHHHHHHHHhHHHHHH--HHHHhHHHHHHH
Confidence            7766666777899999999999999999944 77888888888865 5889999999999998543  567899999999


Q ss_pred             HHHHHHHHHHhcCchhhHHHHHHHhhc
Q psy15921        129 FYLVAILMFVHLPPRSILRLKEIYGVT  155 (158)
Q Consensus       129 F~L~al~~ylr~~~~~~~r~~~~~~~~  155 (158)
                      |.++++++++|+.++++.|+..++|+.
T Consensus       129 f~~lal~~l~r~~~~~~~~~~~lag~~  155 (439)
T TIGR03663       129 FTLLAVGAAFRYLDTGKRRYLFLAASA  155 (439)
T ss_pred             HHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence            999999999999888877877776654

Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.

>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]

Probab=97.84  E-value=0.00015  Score=65.07  Aligned_cols=109  Identities=20%  Similarity=0.200  Sum_probs=89.4

Q ss_pred             CCcchhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhH
Q psy15921         45 GSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI  124 (158)
Q Consensus        45 ~~yRPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~l  124 (158)
                      ...=|+.+-.-++-+.+||.+.++.++.+.+.+.+.++++|.+.+++.++ ..|.+|+++.+.-|.-+-.  -...-.|.
T Consensus        62 ~~kPPl~~Wl~a~~~~lfG~~~~~~rl~~~l~~~~~~~l~y~l~k~l~~~-~~a~~aali~~~~p~~~~~--~~~~~~D~  138 (535)
T COG1807          62 FEKPPLVYWLQALSYLLFGVNEWSARLPSALAGALTALLVYWLAKRLFGR-LAALLAALILLLTPLFFLI--GRLALLDA  138 (535)
T ss_pred             cCCCcHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHH--hHHHhhhH
Confidence            33467888878888999999999999999999999999999999999998 8999999999888864322  23445688


Q ss_pred             HHHHHHHHHHHHHHhcCchh-hHHHHHHHhhcc
Q psy15921        125 LSCIFYLVAILMFVHLPPRS-ILRLKEIYGVTL  156 (158)
Q Consensus       125 La~lF~L~al~~ylr~~~~~-~~r~~~~~~~~~  156 (158)
                      ..++|..++++++.++++++ ..++....|+.+
T Consensus       139 ~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~l  171 (535)
T COG1807         139 ALAFFLTLALALLYLALRARGKLKWLLLLGLAL  171 (535)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHH
Confidence            89999999999999999874 666666555543

>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional

Probab=97.79  E-value=0.00038  Score=63.81  Aligned_cols=91  Identities=15%  Similarity=0.070  Sum_probs=73.1

Q ss_pred             chhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHH
Q psy15921         48 RPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSC  127 (158)
Q Consensus        48 RPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~  127 (158)
                      =|+.+-.-++-+.+||.+.++.++.|.+..++.++++|.+.+++.+++..|++|+++++.-|.-... . .....|.+.+
T Consensus        63 PPL~yWl~Als~~LFG~~~~a~RLpsaL~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~-g-~~a~~D~~l~  140 (552)
T PRK13279         63 PIAGYWINSIGQWLFGDNNFGVRFGSVFSTLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGI-G-TYAVLDPMIT  140 (552)
T ss_pred             CcHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-H-HHHhhhHHHH
Confidence            5777766777888999999999999999999999999999999998888999999998876643221 1 1246788888


Q ss_pred             HHHHHHHHHHHhc
Q psy15921        128 IFYLVAILMFVHL  140 (158)
Q Consensus       128 lF~L~al~~ylr~  140 (158)
                      +|..++++++.+.
T Consensus       141 ~fi~lal~~f~~~  153 (552)
T PRK13279        141 LWLTAAMCSFWLA  153 (552)
T ss_pred             HHHHHHHHHHHHH
Confidence            8988887665433

>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria

Probab=96.96  E-value=0.014  Score=46.31  Aligned_cols=114  Identities=16%  Similarity=0.119  Sum_probs=79.8

Q ss_pred             CCCCCCcchhHhhhhhhhhhhcC-CCchhHH--HHHHHHHHHHHHHHHHHHHHHcch-------------hhHHHHHHHH
Q psy15921         41 PSSHGSYRPLSVLTFRLNYAWSG-FRPFAYH--LTNIGLHCLCTALVHLLALSVLPT-------------HRAAWVASAL  104 (158)
Q Consensus        41 ~~~~~~yRPL~~ls~~l~~~l~G-~~p~~~h--l~nlllH~~~~~Lv~~l~~~l~~~-------------~~~A~laall  104 (158)
                      +..|++.-|+-.+.=.+ ..++. ....+++  +.|.+.-++++.++|+...++.++             ...++++|+.
T Consensus        13 gV~HPPGyPlf~llg~l-f~~lp~~~~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~~~~~~~~~~~~~~~~a~lv~al~   91 (178)
T PF11028_consen   13 GVPHPPGYPLFTLLGRL-FSLLPDFGNIAWRVNLLSALSSALTVLFLFWSITRLLRKLPEEPSTAQTIAILGAGLVGALA   91 (178)
T ss_pred             CCCCCCCcHHHHHHHHH-HHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Confidence            34588889998887766 66666 4444554  467788888889999999999887             5788889999


Q ss_pred             HhhccccchhhhHHHHHhhHHHHHHHHHHHHHHHhcCch----hhHHHHHHHhhccC
Q psy15921        105 FGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPR----SILRLKEIYGVTLK  157 (158)
Q Consensus       105 FalHP~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~~~----~~~r~~~~~~~~~~  157 (158)
                      |+..|.-=+.  -+..--.-|..+|..+-+++.+|+.++    +..|+....+.+|+
T Consensus        92 fafS~sfW~~--Av~aEVYal~~l~~al~~~l~l~w~~~~~~~~~~r~l~l~afl~G  146 (178)
T PF11028_consen   92 FAFSDSFWFQ--AVEAEVYALSSLFTALLLWLLLKWEREADEPRSDRWLLLIAFLCG  146 (178)
T ss_pred             HHhhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchHHHHHHHHHH
Confidence            9876532111  012223567788888888888888875    56777766666553

The function is not known.

>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein

Probab=96.76  E-value=0.0092  Score=55.44  Aligned_cols=102  Identities=19%  Similarity=0.127  Sum_probs=86.2

Q ss_pred             CCcchhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhH
Q psy15921         45 GSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI  124 (158)
Q Consensus        45 ~~yRPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~l  124 (158)
                      .+|-|++....++-..+.|....+|.++-.+.=.+.++..|.+.|++.+ +..|+++|+++..-|-+....-|-..-.|.
T Consensus         2 ~FYpPL~yyl~a~l~~l~g~~~~Ay~l~~~L~~~l~~~~~Y~~~R~~~~-~~~A~l~aiLyl~~py~l~~~y~rgni~e~   80 (616)
T PF10131_consen    2 RFYPPLPYYLGALLSLLFGNPIVAYKLFIFLAFFLGGLGMYFLGRRLGR-RKAAILAAILYLFSPYHLRNIYWRGNIPET   80 (616)
T ss_pred             eeCCcHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhHHHHHHHHHHHhHHHHHHHHhcchHHHH
Confidence            3688999888888888888888899999888888899999999999888 899999999999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHhcCchhhHH
Q psy15921        125 LSCIFYLVAILMFVHLPPRSILR  147 (158)
Q Consensus       125 La~lF~L~al~~ylr~~~~~~~r  147 (158)
                      ++..+.-+-+++..+..+++..|
T Consensus        81 lA~~llPlvll~~~~~~~~~~~r  103 (616)
T PF10131_consen   81 LAFALLPLVLLFLYRFIKKRKYR  103 (616)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCch
Confidence            88888777777766655544433

Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.

>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

Probab=96.55  E-value=0.015  Score=54.60  Aligned_cols=86  Identities=19%  Similarity=0.120  Sum_probs=70.4

Q ss_pred             hhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHH
Q psy15921         55 FRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAI  134 (158)
Q Consensus        55 ~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al  134 (158)
                      ..++...+|.++.+++.+|.++-.++..++|.++|++..++.++.+++++++..-.++--  ---.--|.+-.+|+.++.
T Consensus        98 ~g~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s~l~~~l~~llv~~dn~~~t~--sR~ILLDs~LlfF~~~~~  175 (699)
T COG1928          98 IGLTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYSRLVAALAGLLVAFDNSFVTE--SRFILLDSFLLFFIVAAA  175 (699)
T ss_pred             CCcccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHhccchhhh--hHHHHHHHHHHHHHHHHH
Confidence            334555566788899999999999999999999999999999999999999998766544  222335667788889999


Q ss_pred             HHHHhcCc
Q psy15921        135 LMFVHLPP  142 (158)
Q Consensus       135 ~~ylr~~~  142 (158)
                      +|++|.-.
T Consensus       176 y~~~r~~~  183 (699)
T COG1928         176 YCFLRFHR  183 (699)
T ss_pred             HHHHHHHh
Confidence            99998765

>TIGR03766 conserved hypothetical integral membrane protein

Probab=96.42  E-value=0.018  Score=51.81  Aligned_cols=82  Identities=18%  Similarity=0.231  Sum_probs=64.2

Q ss_pred             hhhhcCCCchh-HHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHHHH
Q psy15921         58 NYAWSGFRPFA-YHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILM  136 (158)
Q Consensus        58 ~~~l~G~~p~~-~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al~~  136 (158)
                      -+.+||.+.+. .++.|+++-.+...++|.+.+++.++ ..|..++.++++-|..+--+  ..--.|..+.++..+++++
T Consensus       129 l~kifg~~~~~~~~llNil~~~~si~liy~i~k~lf~~-~~a~~a~~l~~l~~~~~~y~--~~~Ysd~~~l~~~~l~l~~  205 (483)
T TIGR03766       129 LYKLFGETSWLFFDVVNIVLVDLSALILYKAVKKVFNK-KKAFVALYLFVLLLALSPYI--LIPYTDTWVLPFVSLFLFL  205 (483)
T ss_pred             HHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHH
Confidence            47789974554 49999999999999999999999987 56788888888877654432  2566788888888889888


Q ss_pred             HHhcCc
Q psy15921        137 FVHLPP  142 (158)
Q Consensus       137 ylr~~~  142 (158)
                      +....+
T Consensus       206 ~~~~~~  211 (483)
T TIGR03766       206 YTVISK  211 (483)
T ss_pred             HHHHHh
Confidence            776544

Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.

>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface

Probab=96.23  E-value=0.032  Score=49.83  Aligned_cols=70  Identities=14%  Similarity=0.105  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHHHHHHhcCc
Q psy15921         70 HLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPP  142 (158)
Q Consensus        70 hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~~  142 (158)
                      .++|.+.|.+.+..+|.+.++..+++..|..++++|.+.|..   +--.+.-+|.|.+++.+++++++.+.+.
T Consensus       116 ~~vs~~~~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~Pas---iF~sa~YsEslf~~lsf~gl~~~~~~~~  185 (443)
T PF04188_consen  116 ILVSNVAFLLAAVALYRLTRRVFKSRKLALLAALLFIFSPAS---IFLSAPYSESLFALLSFAGLYLLERGRW  185 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHH---HHhhcCccHHHHHHHHHHHHHHHHhccH
Confidence            567899999999999999999998889999999999999985   4456788999999999999999887773

Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane

>COG5617 Predicted integral membrane protein [Function unknown]

Probab=96.00  E-value=0.022  Score=54.11  Aligned_cols=101  Identities=19%  Similarity=-0.003  Sum_probs=87.0

Q ss_pred             CCCcchhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhh
Q psy15921         44 HGSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRAD  123 (158)
Q Consensus        44 ~~~yRPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~  123 (158)
                      -.+|-|++++..++--.+-|+..-+|...-.+.- ..++++|.+.|...+++..|+++|++|..-|-|-+..-|=-.-..
T Consensus        67 lrYypPl~Yli~aal~~l~~d~~~t~~v~~~la~-llG~~~~~~~r~~g~t~~ia~I~alL~ltsp~~l~vlf~EGniP~  145 (801)
T COG5617          67 LRYYPPLSYLIGAALNFLLGDVVTTYAVFLMLAF-LLGAGGWLLWRLRGRTGFIALISALLWLTSPENLKVLFIEGNIPR  145 (801)
T ss_pred             ceecCcHHHHHHHHHHHhhcChhHHHHHHHHHHH-HHHHHHHHHHHhhccccchHHHHHHHHHhChhheEEEEecCcccH
Confidence            4678999999999988888966667877766666 999999999999999999999999999999999988777666677


Q ss_pred             HHHHHHHHHHHHHHHhcCchhh
Q psy15921        124 ILSCIFYLVAILMFVHLPPRSI  145 (158)
Q Consensus       124 lLa~lF~L~al~~ylr~~~~~~  145 (158)
                      .++.-|..+++.++.+..++|+
T Consensus       146 v~~i~f~pl~l~~l~~~~~~Gk  167 (801)
T COG5617         146 VLAIGFGPLALGLLERFLERGK  167 (801)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCc
Confidence            8888899999999998887664

>KOG2647|consensus

Probab=95.72  E-value=0.04  Score=49.18  Aligned_cols=70  Identities=21%  Similarity=0.284  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHHHHHHhcCc
Q psy15921         70 HLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPP  142 (158)
Q Consensus        70 hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~~  142 (158)
                      -++|+.+|+.++.++|.+.+++.+++..+.-|+++|...|..   +-.-++-+|.|-++|.+.+++...+.++
T Consensus       129 ~~vn~~~f~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAs---IF~ts~YSEsLfa~~s~~Gi~~~~~~~~  198 (444)
T KOG2647|consen  129 VLVNIFFFMLAAVALYQLTRIILHDPKISFYAALLFCFNPAS---IFLTAGYSESLFALFSFLGILFLEKGRQ  198 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcChhHHhhhhheeEecchH---hhhhHHhhHHHHHHHHHHHHHHHhcCCc
Confidence            458999999999999999999999999999999999999975   4466889999999999999999998865

>COG5305 Predicted membrane protein [Function unknown]

Probab=94.81  E-value=0.12  Score=47.70  Aligned_cols=93  Identities=22%  Similarity=0.198  Sum_probs=79.8

Q ss_pred             cchhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHH
Q psy15921         47 YRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILS  126 (158)
Q Consensus        47 yRPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa  126 (158)
                      --|+-.+.-..-+++||.+-..-+-.+.++-++...++|.+.|.+.+. ..+.+++.++|+.|.++..  -.-.|+..++
T Consensus        97 ~~PLYfll~h~W~~lF~~s~~~~Rsls~L~~~~ai~~~y~l~r~l~~~-~~a~la~~~~AisP~~i~~--~qe~R~y~L~  173 (552)
T COG5305          97 HPPLYFLLAHFWMALFGNSLLASRSLSALLSALAIPLVYWLGRELFGS-TTALLAAALMAISPFHIFY--SQEARSYALA  173 (552)
T ss_pred             CCCeeehHHHHHHHHhchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHccChHHHHH--HHHHHHHHHH
Confidence            344555555566789998888889999999999999999999999987 4555999999999999876  6788999999


Q ss_pred             HHHHHHHHHHHHhcCc
Q psy15921        127 CIFYLVAILMFVHLPP  142 (158)
Q Consensus       127 ~lF~L~al~~ylr~~~  142 (158)
                      ..+.+++..|.+++-+
T Consensus       174 ~~~~lis~~~Ll~ai~  189 (552)
T COG5305         174 VATTLISATLLLRAIR  189 (552)
T ss_pred             HHHHHHHHHHHHHHcc
Confidence            9999999999888775

>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64

Probab=94.12  E-value=0.39  Score=42.64  Aligned_cols=109  Identities=16%  Similarity=0.100  Sum_probs=76.3

Q ss_pred             CCcchhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhH
Q psy15921         45 GSYRPLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI  124 (158)
Q Consensus        45 ~~yRPL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~l  124 (158)
                      ....|+-.+.- --|++|+ +|..-=++..++=.+.+..+|+++|+...++..|++.+++++++|.-..++. --=..+.
T Consensus        40 ~HfsPil~ll~-Ply~l~P-s~~tLli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~-~dFH~~~  116 (449)
T PF09852_consen   40 DHFSPILYLLA-PLYRLFP-SPLTLLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANL-FDFHPVA  116 (449)
T ss_pred             ccchHHHHHHH-HHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhh-CCCcHHH
Confidence            34556655544 4588886 8999999999999999999999999998778999999999999998776643 2224455


Q ss_pred             HHHHHHHHHHHHHHhcCchhhHHHHHHHhhccC
Q psy15921        125 LSCIFYLVAILMFVHLPPRSILRLKEIYGVTLK  157 (158)
Q Consensus       125 La~lF~L~al~~ylr~~~~~~~r~~~~~~~~~~  157 (158)
                      ++.-+.+.+++++.| ++...--+..+..+++|
T Consensus       117 ~avPll~~~~~~~~~-~r~~~~~~~~ll~llvK  148 (449)
T PF09852_consen  117 FAVPLLLWALYALER-RRWRLFILWALLLLLVK  148 (449)
T ss_pred             HHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence            555566677775554 33333334444444444

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.

>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.16  E-value=0.47  Score=43.20  Aligned_cols=107  Identities=22%  Similarity=0.201  Sum_probs=72.3

Q ss_pred             CCCcchhHh--hhhhhhhhhc---CCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHH
Q psy15921         44 HGSYRPLSV--LTFRLNYAWS---GFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGL  118 (158)
Q Consensus        44 ~~~yRPL~~--ls~~l~~~l~---G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi  118 (158)
                      .-+|||.-.  +.+-.|+++|   |.+-+--+++-.+...+..... ++.|+-+++ ...+..+.+-+..|+-+.=  .-
T Consensus        57 aw~YrPi~HGPfL~hvn~avF~~lGasDataRlvvAv~G~llpL~a-wL~R~rL~d-~evlal~~LLA~sPvlVYY--SR  132 (556)
T COG4745          57 AWSYRPIYHGPFLYHVNYAVFGLLGASDATARLVVAVTGVLLPLTA-WLYRTRLGD-KEVLALATLLAFSPVLVYY--SR  132 (556)
T ss_pred             cceecccccCchhhhhhhhhhhhcccchhhhhhhHHHhhhHHHHHH-HHHHHhccc-hHHHHHHHHHhcChhhhhH--HH
Confidence            456788754  3455556654   4466666766655555544444 444444443 3445566677888876543  34


Q ss_pred             HHHhhHHHHHHHHHHHHHHHhcCchhhHHHHHHHhh
Q psy15921        119 VGRADILSCIFYLVAILMFVHLPPRSILRLKEIYGV  154 (158)
Q Consensus       119 ~~R~~lLa~lF~L~al~~ylr~~~~~~~r~~~~~~~  154 (158)
                      =-|+|++-+.|.++++....|+.++++.|+....++
T Consensus       133 FmR~Dl~la~ftl~aVg~~vR~lDt~R~~yL~~sA~  168 (556)
T COG4745         133 FMRNDLLLAAFTLLAVGFAVRYLDTERFRYLYASAV  168 (556)
T ss_pred             HHhhhHHHHHHHHHHHHHHHHHhhcccccchhhhhh
Confidence            579999999999999999999999998888776655

>COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=90.81  E-value=1  Score=39.78  Aligned_cols=90  Identities=19%  Similarity=0.236  Sum_probs=72.2

Q ss_pred             hhHhhhhhhhhhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHH
Q psy15921         49 PLSVLTFRLNYAWSGFRPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCI  128 (158)
Q Consensus        49 PL~~ls~~l~~~l~G~~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~l  128 (158)
                      ||.---.++.-.+ -+.|.-+++=+++.|.+...++++..+++.++..+++.+|++-|++|.--..  -.++--|+-.++
T Consensus       138 pLgKyIiAl~ml~-~d~Pl~WRiPsiIe~~liliiv~~~~~ki~~~~la~~~aA~~~alDp~l~am--g~VAMLDIhvaF  214 (438)
T COG4346         138 PLGKYIIALGMLI-VDKPLYWRIPSIIEGALILIIVYFVAYKIARSPLAGLIAALLAALDPLLRAM--GGVAMLDIHVAF  214 (438)
T ss_pred             cHHHHHHHHHHHH-hcCCceeeccHHHhhhHHHHHHHHHHHHHhcCchHHHHHHHHHhhCcHHHHh--cchhHHHHHHHH
Confidence            4554444443333 3899999999999999999999999999999888888999999999975433  567777888999


Q ss_pred             HHHHHHHHHHhcC
Q psy15921        129 FYLVAILMFVHLP  141 (158)
Q Consensus       129 F~L~al~~ylr~~  141 (158)
                      |..+.+++..-.|
T Consensus       215 FtaL~~~fl~~~R  227 (438)
T COG4346         215 FTALFMYFLANDR  227 (438)
T ss_pred             HHHHHHHHHhcCC
Confidence            9988888877554

>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells

Probab=89.84  E-value=0.18  Score=44.43  Aligned_cols=81  Identities=20%  Similarity=0.164  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHHHHHHhcCchhh--HHHHH
Q psy15921         73 NIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPPRSI--LRLKE  150 (158)
Q Consensus        73 nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~~~~~--~r~~~  150 (158)
                      --++-.+.+..+|.+.|++.+ +.++++||++.++-|.+.+=..-=.-..|.+..+|.++++++++++.+++.  ..+..
T Consensus       101 ppvl~~L~vi~~y~~~~~~~~-~~~Gl~aA~l~a~~p~~l~RT~~G~~D~~~~~~~f~~l~~~~~~~a~~~~~~~~~~~~  179 (483)
T PF02516_consen  101 PPVLGALTVIPVYLLGRRLGG-RKAGLLAAFLLAISPGYLSRTMAGFYDHHMLELFFPLLIIYFFLLALKSAKRPLIYAV  179 (483)
T ss_dssp             HHHHGGGGHHHHHHHHHHTT--HHHHHHHHHHHTTSHHHHHTSSTT--SGGGGTTHHHHHHHHHHHHHHHH------THH
T ss_pred             HHHHHHHHHHHHHHHHHHhCC-CchHHHHHHHHHHhHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHhccchhhHHHH
Confidence            344566777888999977644 589999999999999977654333447888999999999999998777654  44544


Q ss_pred             HHhh
Q psy15921        151 IYGV  154 (158)
Q Consensus       151 ~~~~  154 (158)
                      ++|+
T Consensus       180 laGl  183 (483)
T PF02516_consen  180 LAGL  183 (483)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4444

A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.

>KOG3359|consensus

Probab=88.62  E-value=4.3  Score=38.74  Aligned_cols=93  Identities=19%  Similarity=0.106  Sum_probs=71.7

Q ss_pred             cchhHhhhhhhhhhhcCC-----------------CchhHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhcc
Q psy15921         47 YRPLSVLTFRLNYAWSGF-----------------RPFAYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHP  109 (158)
Q Consensus        47 yRPL~~ls~~l~~~l~G~-----------------~p~~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP  109 (158)
                      .-|+.-..+++.-.+.|.                 +-.+++..|..+-.++.-++|..++.+..++.+|.++|++++..-
T Consensus        83 HPPlgKmL~al~g~L~GydG~f~f~~~g~~~~~~~~y~~mR~f~a~lgsl~vp~~y~t~~~~~~s~~aa~l~allv~~dn  162 (723)
T KOG3359|consen   83 HPPLGKMLIALVGYLAGYDGSFDFQSIGEYYPNGVPYVGMRLFSALLGSLTVPLAYLTLKELGFSRLAAALAALLVLFDN  162 (723)
T ss_pred             CchHHHHHHHHHHHHhCCCCCccccCCCccCCCCCchHhHHHHHHHHHhHHHHHHHHHHHHhcccHHHHHHHHHHHhhcc
Confidence            356666666665555442                 334889999999999999999999999999999999999998875


Q ss_pred             ccchhhhHHHHHhhHHHHHHHHHHHHHHHhcC
Q psy15921        110 VHTEAVAGLVGRADILSCIFYLVAILMFVHLP  141 (158)
Q Consensus       110 ~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~  141 (158)
                      -.+--=..|  --|.+-.+|+.++.+|++|.-
T Consensus       163 s~~T~sr~I--LLDs~Llff~~~~~y~~~r~~  192 (723)
T KOG3359|consen  163 SLVTLSRFI--LLDSMLLFFMAAAVYCFVRFY  192 (723)
T ss_pred             cchhhhhHH--HHhHHHHHHHHHHHHHHHHHH
Confidence            554332222  246677889999999999876

>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes

Probab=85.51  E-value=12  Score=29.17  Aligned_cols=42  Identities=29%  Similarity=0.358  Sum_probs=31.6

Q ss_pred             HHHHHHHHhhccccchhhhHHHHHhhHHHHHHHHHHHHHHHhcCc
Q psy15921         98 AWVASALFGVHPVHTEAVAGLVGRADILSCIFYLVAILMFVHLPP  142 (158)
Q Consensus        98 A~laallFalHP~~~eaV~wi~~R~~lLa~lF~L~al~~ylr~~~  142 (158)
                      ......+.+..|+ .++  -..++.|++.+++.+++++++.|.|.
T Consensus        55 ~~~~~~~~~~~p~-~~~--~~~gq~~~l~~~l~~~a~~~~~r~r~   96 (241)
T PF09594_consen   55 LLLALLLLAFPPV-LSA--LGLGQFDLLVAALLLLALLALRRGRP   96 (241)
T ss_pred             HHHHHHHHHHHHH-HHH--HHhccHHHHHHHHHHHHHHHHHcCCC
Confidence            3445567778888 333  34589999999999999999986654

It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups

>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]

Probab=83.45  E-value=2.2  Score=40.76  Aligned_cols=109  Identities=19%  Similarity=0.192  Sum_probs=73.3

Q ss_pred             cchhHhhhhhhhhhhcC-CCch----hHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHH
Q psy15921         47 YRPLSVLTFRLNYAWSG-FRPF----AYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGR  121 (158)
Q Consensus        47 yRPL~~ls~~l~~~l~G-~~p~----~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R  121 (158)
                      |-|+-...-..-+..++ ..|.    ..-+.-.++-.+.++.+|.+.|++.++ ..++++|++.++-|-++.-..-=..|
T Consensus        87 ~~pl~~~l~~~~~~~~~~~~~~~~~~~~~~~PailG~L~vI~vYl~~r~i~~~-~~g~~aa~ll~~~p~~~~rt~~G~~d  165 (773)
T COG1287          87 FPPLFLYLTAALGLILGSIFPVSLETAALLFPAILGVLTVIPVYLLGRRILGD-KTGLLAALLLALAPGYLSRTVAGFYD  165 (773)
T ss_pred             CCchHHHHHHHHHHHHHccCchHHHHHHHHhhHHHhhHHHHHHHHHHHHHhcc-hhhHHHHHHHHHhhHHHHHhhcCccC
Confidence            55555444444344433 2441    233445567778889999999999986 88889999988888877664444678


Q ss_pred             hhHHHHHHHHHHHHHHHhcCc-----hhhHHHHHHHhhcc
Q psy15921        122 ADILSCIFYLVAILMFVHLPP-----RSILRLKEIYGVTL  156 (158)
Q Consensus       122 ~~lLa~lF~L~al~~ylr~~~-----~~~~r~~~~~~~~~  156 (158)
                      .+..-.+|.+++++.+.++.+     ++...+..++|+++
T Consensus       166 ~~~~~~~~~~~~l~~~~~aL~~~~~~~~~~~~~~lag~~~  205 (773)
T COG1287         166 TDMFELLLPLFALFFFLLALKAAKKLKKPVIYALLAGLAL  205 (773)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHH
Confidence            888777777777777766665     35566666666654

>PF14264 Glucos_trans_II: Glucosyl transferase GtrII

Probab=80.24  E-value=26  Score=29.15  Aligned_cols=87  Identities=21%  Similarity=0.162  Sum_probs=52.1

Q ss_pred             CCcchhHhhhhhhhhhhcCC----CchhHHHHHHHHHHHHHHHHHHHHHHHcc-hhhHHHHHHHHHhhccccchhhhHHH
Q psy15921         45 GSYRPLSVLTFRLNYAWSGF----RPFAYHLTNIGLHCLCTALVHLLALSVLP-THRAAWVASALFGVHPVHTEAVAGLV  119 (158)
Q Consensus        45 ~~yRPL~~ls~~l~~~l~G~----~p~~~hl~nlllH~~~~~Lv~~l~~~l~~-~~~~A~laallFalHP~~~eaV~wi~  119 (158)
                      ...||+..+...+-   +|.    .|+.-.+..+++=.+.++++   .+.... +...+.+.++++...|.-.|.-.+.-
T Consensus        27 ~~GR~~~~~~~~~l---~~~~~~~~~pl~~iLs~~~la~s~~~~---~~~~~~~~~~~~~l~~~~~~~~P~~~~~lsy~~  100 (319)
T PF14264_consen   27 SSGRPLLDLLMKLL---FGTGNYDLPPLPQILSILFLALSAVLL---VRLFDIKSSFISVLFSLLFISSPFFLENLSYRF  100 (319)
T ss_pred             hcCchHHHHHHHHH---hccCCCchhHHHHHHHHHHHHHHHHHH---HHHhCccchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            45899998887654   232    24444444444444444443   333332 34678889999999999999988876


Q ss_pred             HHhhHH-HHHHHHHHHHHH
Q psy15921        120 GRADIL-SCIFYLVAILMF  137 (158)
Q Consensus       120 ~R~~lL-a~lF~L~al~~y  137 (158)
                      +-.+.. +.++..++.++.
T Consensus       101 ~s~~~~ls~~l~~la~~~~  119 (319)
T PF14264_consen  101 DSLPMALSLLLAVLAFYFL  119 (319)
T ss_pred             ccHHHHHHHHHHHHHHHHH
Confidence            654444 333334444433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	158
3rce_A	724	Oligosaccharide transferase to N-glycosylate PROT;	95.9

>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari}

Probab=95.90  E-value=0.006  Score=56.40  Aligned_cols=109  Identities=12%  Similarity=0.016  Sum_probs=80.1

Q ss_pred             CcchhHhhhhhhhhhhcCCCch-hHHHHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHhhccccchhhhHHHHHhhH
Q psy15921         46 SYRPLSVLTFRLNYAWSGFRPF-AYHLTNIGLHCLCTALVHLLALSVLPTHRAAWVASALFGVHPVHTEAVAGLVGRADI  124 (158)
Q Consensus        46 ~yRPL~~ls~~l~~~l~G~~p~-~~hl~nlllH~~~~~Lv~~l~~~l~~~~~~A~laallFalHP~~~eaV~wi~~R~~l  124 (158)
                      ++.|+-...-+.-+.++|.+.. .....--++-.+.+..+|.+.+++.++ .++++||++.++-|.+..=..-=.-..|.
T Consensus        79 p~g~~~~~l~a~l~~i~g~sl~~v~~~lp~ifg~L~vi~~yll~~el~~~-~aGl~AAll~ai~P~~i~RS~aG~~D~e~  157 (724)
T 3rce_A           79 YFGSSLSTLTYWLYSILPFSFESIILYMSTFFASLIVVPIILIAREYKLT-TYGFIAALLGSIANSYYNRTMSGYYDTDM  157 (724)
T ss_dssp             CTTCHHHHHHHHHHHSCSSCHHHHHHHHHHHHGGGGHHHHHHHHHHTTCH-HHHHHHHHHHTTSHHHHHTSSTTCCSGGG
T ss_pred             CCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-hHHHHHHHHHHHHHHHHHHhccccccchh
Confidence            3444333333444667786654 345666677788889999999998774 68999999999999864421112457888


Q ss_pred             HHHHHHHHHHHHHHhcCchhhHHHHHHHhhc
Q psy15921        125 LSCIFYLVAILMFVHLPPRSILRLKEIYGVT  155 (158)
Q Consensus       125 La~lF~L~al~~ylr~~~~~~~r~~~~~~~~  155 (158)
                      ++.+|.++++++++++.+++..++-.++|+.
T Consensus       158 l~i~~~ll~~~~~i~alk~~~~~~~~lagl~  188 (724)
T 3rce_A          158 LVLVLPMLILLTFIRLTINKDIFTLLLSPIF  188 (724)
T ss_dssp             GTTHHHHHHHHHHHHHHHHCCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence            9999999999999999998887777776664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00