Psyllid ID: psy15935

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200--
MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
ccccccEEcEEEEHHHHHHHHHHHcccEEEEccccccccEEEEEEEEccccccccccccHHHHHHHHcccEEEEEEEEEEEEcccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccEEEEcccccccccEEEEEcc
cccccccccEEEEcHHHHHHHHHHccccccccccccccccccccccccccccHHHccccHHHHHHHHcccccHHcccccccHHHcccccHHHHEEEEEEcccccccEEEEEEEEccccEEEEcccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHcHHHcccEEcccccccccEEEEEEEc
MNSRGDYFPILGICLGFELLLFVENKEKELrtdcncfhenlslrflkngsktglyktfpkKSLKALAKNNITYNYHIWCITRatmnstklsdAWDIlteskagngkkFVSTvqskkypfvgiqfhpeknsyewntvAHVNHSRIAIETSRLFYDWIVTEasknkhaypshaDLYKEVIYnyaptmsyplnnktsfeqiyffd
MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLslrflkngsktglYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEasknkhaypsHADLYKEVIYNYAPTmsyplnnktsFEQIYFFD
MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
*****DYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFF*
MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNK*******DLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
****GDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query202 2.2.26 [Sep-21-2011]
A7YWG4318 Gamma-glutamyl hydrolase yes N/A 0.955 0.606 0.349 7e-28
Q9Z0L8317 Gamma-glutamyl hydrolase yes N/A 0.955 0.608 0.336 7e-27
Q92820318 Gamma-glutamyl hydrolase yes N/A 0.950 0.603 0.35 8e-27
O65355347 Gamma-glutamyl hydrolase no N/A 0.970 0.564 0.336 3e-25
Q62867317 Gamma-glutamyl hydrolase yes N/A 0.950 0.605 0.32 7e-25
Q54HL4347 Gamma-glutamyl hydrolase yes N/A 0.985 0.573 0.320 8e-25
Q54LN4317 Gamma-glutamyl hydrolase no N/A 0.985 0.627 0.301 3e-22
P93164342 Gamma-glutamyl hydrolase no N/A 0.980 0.578 0.290 6e-19
>sp|A7YWG4|GGH_BOVIN Gamma-glutamyl hydrolase OS=Bos taurus GN=GGH PE=2 SV=1 Back     alignment and function desciption
 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 10/203 (4%)

Query: 3   SRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKS 62
             GDYFP+ G CLGFE L+++ + E  L T  +     L L F +   ++ +++ FP   
Sbjct: 123 GEGDYFPVWGTCLGFEELIYLVSGE-SLLTLTDTVGIKLPLNFSRGTLQSRMFQNFPADL 181

Query: 63  LKALAKNNITYNYHIWCITRATMNSTK---LSDAWDILTESKAGNGKKFVSTVQSKKYPF 119
           L +LA   +T ++H W ++   MN TK   L   + ILT +  GN   F+ST++  +YP 
Sbjct: 182 LLSLAVEPLTAHFHKWSLS--VMNFTKNEKLKAFFSILTTNTDGN-IDFISTMEGYRYPI 238

Query: 120 VGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIY 179
            G+Q+HPEK  YEW  +  ++H+  A++ +    ++ V EA K+ H + S  +  K +IY
Sbjct: 239 YGVQWHPEKAPYEWGQLRGISHAPNAVKAAFYLAEFFVAEARKSNHHFESDVEETKALIY 298

Query: 180 NYAPTMSYPLNNKTSFEQIYFFD 202
            Y PT +    N +SF+Q Y FD
Sbjct: 299 QYRPTYT---GNVSSFQQSYIFD 318
Hydrolyzes the polyglutamate sidechains of pteroylpolyglutamates. Progressively removes gamma-glutamyl residues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an important role in the bioavailability of dietary pteroylpolyglutamates and in the metabolism of pteroylpolyglutamates and antifolates. Exhibits either endo- or exopeptidase activity depending upon the tissue of origin. When secreted, it acts primarily as an endopeptidase.
Bos taurus (taxid: 9913)
EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 9
>sp|Q9Z0L8|GGH_MOUSE Gamma-glutamyl hydrolase OS=Mus musculus GN=Ggh PE=1 SV=2 Back     alignment and function description
>sp|Q92820|GGH_HUMAN Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2 Back     alignment and function description
>sp|O65355|GGH_ARATH Gamma-glutamyl hydrolase OS=Arabidopsis thaliana GN=GGH PE=1 SV=2 Back     alignment and function description
>sp|Q62867|GGH_RAT Gamma-glutamyl hydrolase OS=Rattus norvegicus GN=Ggh PE=1 SV=1 Back     alignment and function description
>sp|Q54HL4|GGHB_DICDI Gamma-glutamyl hydrolase B OS=Dictyostelium discoideum GN=gghB PE=3 SV=1 Back     alignment and function description
>sp|Q54LN4|GGHA_DICDI Gamma-glutamyl hydrolase A OS=Dictyostelium discoideum GN=gghA PE=3 SV=1 Back     alignment and function description
>sp|P93164|GGH_SOYBN Gamma-glutamyl hydrolase OS=Glycine max PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
158296287 377 AGAP006670-PA [Anopheles gambiae str. PE 0.980 0.525 0.385 1e-38
328720175 314 PREDICTED: LOW QUALITY PROTEIN: gamma-gl 0.980 0.630 0.453 1e-38
326741704 314 gamma-glutamyl hydrolase-like precursor 0.980 0.630 0.453 2e-38
239790520 314 ACYPI008145 [Acyrthosiphon pisum] 0.980 0.630 0.438 1e-36
328720181 314 PREDICTED: gamma-glutamyl hydrolase A-li 0.980 0.630 0.438 1e-36
307184425 349 Gamma-glutamyl hydrolase [Camponotus flo 0.985 0.570 0.403 2e-36
321466413 340 hypothetical protein DAPPUDRAFT_305752 [ 0.980 0.582 0.398 4e-36
242009081 320 gamma-glutamyl hydrolase precursor, puta 0.985 0.621 0.371 2e-35
328720183 308 PREDICTED: gamma-glutamyl hydrolase A-li 0.980 0.642 0.418 3e-35
345497598 320 PREDICTED: gamma-glutamyl hydrolase A-li 0.980 0.618 0.375 5e-35
>gi|158296287|ref|XP_316706.4| AGAP006670-PA [Anopheles gambiae str. PEST] gi|157016439|gb|EAA11416.4| AGAP006670-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 2/200 (1%)

Query: 2   NSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKK 61
           N  G+YFP+ G CLGFELL ++     E R  C    + L L F  +  K+ L+ + P  
Sbjct: 147 NENGEYFPLWGTCLGFELLTYLAANGTEHRAHCRSNSQALPLNFKDDFRKSRLFASAPND 206

Query: 62  SLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVG 121
            +  L+   +T N+H +C+T A + +  L + W +++  +  NG +F+ST++ K YPF G
Sbjct: 207 VIDILSNEPVTANFHQFCVTEANLTAYGLDEEWRVMSVDRDWNGMEFISTIEHKSYPFYG 266

Query: 122 IQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNY 181
           IQFHPEKN YEW    +++H+  A+  ++ F D+ + EA K+ H++P+ A L K VIYNY
Sbjct: 267 IQFHPEKNIYEWIQNKNISHTANAVRAAQFFADFFIAEARKSDHSFPNEATLEKHVIYNY 326

Query: 182 APTMSYPLNNKTSFEQIYFF 201
            PT +     ++SFEQ Y F
Sbjct: 327 QPTFTGL--QRSSFEQCYMF 344

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|328720175|ref|XP_003246967.1| PREDICTED: LOW QUALITY PROTEIN: gamma-glutamyl hydrolase A [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|326741704|ref|NP_001192053.1| gamma-glutamyl hydrolase-like precursor [Acyrthosiphon pisum] gi|239790522|dbj|BAH71816.1| ACYPI008145 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|239790520|dbj|BAH71815.1| ACYPI008145 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328720181|ref|XP_003246970.1| PREDICTED: gamma-glutamyl hydrolase A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|307184425|gb|EFN70834.1| Gamma-glutamyl hydrolase [Camponotus floridanus] Back     alignment and taxonomy information
>gi|321466413|gb|EFX77408.1| hypothetical protein DAPPUDRAFT_305752 [Daphnia pulex] Back     alignment and taxonomy information
>gi|242009081|ref|XP_002425321.1| gamma-glutamyl hydrolase precursor, putative [Pediculus humanus corporis] gi|212509095|gb|EEB12583.1| gamma-glutamyl hydrolase precursor, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|328720183|ref|XP_001948688.2| PREDICTED: gamma-glutamyl hydrolase A-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|345497598|ref|XP_001601392.2| PREDICTED: gamma-glutamyl hydrolase A-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query202
UNIPROTKB|F1NR48321 GGH "Uncharacterized protein" 0.965 0.607 0.394 2.7e-36
ZFIN|ZDB-GENE-040426-2615312 ggh "gamma-glutamyl hydrolase 0.965 0.625 0.376 3e-30
ZFIN|ZDB-GENE-050309-193314 zgc:171566 "zgc:171566" [Danio 0.965 0.621 0.364 7.9e-30
UNIPROTKB|F1RTA3318 GGH "Uncharacterized protein" 0.950 0.603 0.355 2.7e-29
UNIPROTKB|A7YWG4318 GGH "Gamma-glutamyl hydrolase" 0.945 0.600 0.353 1.5e-28
MGI|MGI:1329035317 Ggh "gamma-glutamyl hydrolase" 0.955 0.608 0.336 1.5e-28
UNIPROTKB|E2QUT9318 GGH "Uncharacterized protein" 0.950 0.603 0.34 1.9e-28
FB|FBgn0263607373 l(3)72Dp "lethal (3) 72Dp" [Dr 0.980 0.530 0.308 2.4e-28
UNIPROTKB|Q92820318 GGH "Gamma-glutamyl hydrolase" 0.950 0.603 0.35 2.4e-28
TAIR|locus:2037583348 GGH1 "gamma-glutamyl hydrolase 0.970 0.563 0.341 8.2e-28
UNIPROTKB|F1NR48 GGH "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 80/203 (39%), Positives = 118/203 (58%)

Query:     2 NSRGDYFPILGICLGFELLLFVENKEKEL-RTDCNCFHENLSLRFLKNGSKTGLYKTFPK 60
             N +GDYFP+ G CLG ELL ++ + E  L  T  N F  +L L F     ++ L+K  P 
Sbjct:   125 NDKGDYFPVWGTCLGHELLTYLTSGEILLVNTKTNGF--SLPLNFTSAAKRSRLFKNLPN 182

Query:    61 KSLKALAKNNITYNYHIWCITRATMNST-KLSDAWDILTESKAGNGKKFVSTVQSKKYPF 119
               L A A   +T N+H+W I+        KL + ++ILT +   N  +F+ST+++ KYP 
Sbjct:   183 DLLHAFANEPLTSNFHVWSISMENFTKNEKLYNFYNILT-TNIDNEVEFISTMEAYKYPI 241

Query:   120 VGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIY 179
              G+Q+HPEKNS+EW   + + HS  AI  +    D+ + EA K+ H +PS  +  KE+IY
Sbjct:   242 YGVQWHPEKNSFEWKNSSGIPHSSSAIRAAHYIADFFINEARKSLHRFPSEGEETKELIY 301

Query:   180 NYAPTMSYPLNNKTSFEQIYFFD 202
             NY PT +      +SF+Q+YFFD
Sbjct:   302 NYTPTYT---GTFSSFQQVYFFD 321
GO:0006541 "glutamine metabolic process" evidence=IEA
GO:0034722 "gamma-glutamyl-peptidase activity" evidence=IEA
ZFIN|ZDB-GENE-040426-2615 ggh "gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050309-193 zgc:171566 "zgc:171566" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RTA3 GGH "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|A7YWG4 GGH "Gamma-glutamyl hydrolase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1329035 Ggh "gamma-glutamyl hydrolase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QUT9 GGH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
FB|FBgn0263607 l(3)72Dp "lethal (3) 72Dp" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q92820 GGH "Gamma-glutamyl hydrolase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TAIR|locus:2037583 GGH1 "gamma-glutamyl hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q62867GGH_RAT3, ., 4, ., 1, 9, ., 90.320.95040.6056yesN/A
Q92820GGH_HUMAN3, ., 4, ., 1, 9, ., 90.350.95040.6037yesN/A
Q9Z0L8GGH_MOUSE3, ., 4, ., 1, 9, ., 90.33660.95540.6088yesN/A
A7YWG4GGH_BOVIN3, ., 4, ., 1, 9, ., 90.34970.95540.6069yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.19.9LOW CONFIDENCE prediction!
3rd Layer3.4.19LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
cd01747273 cd01747, GATase1_Glutamyl_Hydrolase, Type 1 glutam 1e-55
pfam00117186 pfam00117, GATase, Glutamine amidotransferase clas 5e-07
pfam07722219 pfam07722, Peptidase_C26, Peptidase C26 5e-07
TIGR01823 742 TIGR01823, PabB-fungal, aminodeoxychorismate synth 7e-05
cd01743184 cd01743, GATase1_Anthranilate_Synthase, Type 1 glu 8e-05
COG0118204 COG0118, HisH, Glutamine amidotransferase [Amino a 5e-04
CHL00101190 CHL00101, trpG, anthranilate synthase component 2 0.001
COG0512191 COG0512, PabA, Anthranilate/para-aminobenzoate syn 0.001
cd01748198 cd01748, GATase1_IGP_Synthase, Type 1 glutamine am 0.002
PLN02335222 PLN02335, PLN02335, anthranilate synthase 0.002
PRK14607 534 PRK14607, PRK14607, bifunctional glutamine amidotr 0.002
>gnl|CDD|153218 cd01747, GATase1_Glutamyl_Hydrolase, Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information 
 Score =  177 bits (450), Expect = 1e-55
 Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 1/184 (0%)

Query: 2   NSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKK 61
           N  GDYFP+ G CLGFELL ++ + E  L       +  L L F ++  ++ L+K FP  
Sbjct: 87  NDAGDYFPVWGTCLGFELLTYLTSGETLLLEATEATNSALPLNFTEDALQSRLFKRFPPD 146

Query: 62  SLKALAKNNITYNYHIWCITRATM-NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFV 120
            LK+LA   +T N H + I+      +  LSD +++LT +   NG +F+STV++ KYP  
Sbjct: 147 LLKSLATEPLTMNNHRYGISPENFTENGLLSDFFNVLTTNDDWNGVEFISTVEAYKYPIY 206

Query: 121 GIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYN 180
           G+Q+HPEKN++EW   + + HS  AI  ++ F ++ V EA K+ + + S  +  K +IYN
Sbjct: 207 GVQWHPEKNAFEWKKSSSIPHSEEAIRLTQYFANFFVNEARKSNNRFESAEEETKHLIYN 266

Query: 181 YAPT 184
           Y PT
Sbjct: 267 YKPT 270

Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site. Length = 273
>gnl|CDD|215729 pfam00117, GATase, Glutamine amidotransferase class-I Back     alignment and domain information
>gnl|CDD|219535 pfam07722, Peptidase_C26, Peptidase C26 Back     alignment and domain information
>gnl|CDD|233588 TIGR01823, PabB-fungal, aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>gnl|CDD|153214 cd01743, GATase1_Anthranilate_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>gnl|CDD|223196 COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|214365 CHL00101, trpG, anthranilate synthase component 2 Back     alignment and domain information
>gnl|CDD|223586 COG0512, PabA, Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|153219 cd01748, GATase1_IGP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>gnl|CDD|177969 PLN02335, PLN02335, anthranilate synthase Back     alignment and domain information
>gnl|CDD|237764 PRK14607, PRK14607, bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 202
KOG1559|consensus340 100.0
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 100.0
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.95
PRK08857193 para-aminobenzoate synthase component II; Provisio 99.92
PLN02335222 anthranilate synthase 99.92
PRK08007187 para-aminobenzoate synthase component II; Provisio 99.92
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 99.92
PRK06895190 putative anthranilate synthase component II; Provi 99.91
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 99.9
PRK05670189 anthranilate synthase component II; Provisional 99.9
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 99.9
PRK05637208 anthranilate synthase component II; Provisional 99.9
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 99.9
CHL00101190 trpG anthranilate synthase component 2 99.9
PRK06774191 para-aminobenzoate synthase component II; Provisio 99.9
PRK07765214 para-aminobenzoate synthase component II; Provisio 99.9
PRK00758184 GMP synthase subunit A; Validated 99.89
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 99.88
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 99.88
PLN02347 536 GMP synthetase 99.88
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 99.87
COG2071243 Predicted glutamine amidotransferases [General fun 99.86
PRK09065237 glutamine amidotransferase; Provisional 99.86
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 99.86
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 99.85
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 99.85
PRK00074 511 guaA GMP synthase; Reviewed 99.85
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 99.84
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.84
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 99.84
PRK12564360 carbamoyl phosphate synthase small subunit; Review 99.84
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 99.84
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 99.84
PRK13566720 anthranilate synthase; Provisional 99.84
PRK07567242 glutamine amidotransferase; Provisional 99.84
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 99.83
PRK12838354 carbamoyl phosphate synthase small subunit; Review 99.83
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 99.83
PRK05665240 amidotransferase; Provisional 99.81
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 99.81
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 99.81
PRK08250235 glutamine amidotransferase; Provisional 99.81
KOG0026|consensus223 99.8
KOG3179|consensus245 99.79
PRK06490239 glutamine amidotransferase; Provisional 99.79
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.79
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 99.79
PRK07053234 glutamine amidotransferase; Provisional 99.78
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 99.75
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.75
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 99.74
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.73
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.73
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.72
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 99.72
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.72
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.7
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.7
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.69
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.69
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.68
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 99.68
KOG1622|consensus 552 99.68
PRK06186229 hypothetical protein; Validated 99.67
PRK05380533 pyrG CTP synthetase; Validated 99.64
PLN02327557 CTP synthase 99.62
KOG1224|consensus 767 99.61
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 99.6
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 99.57
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.54
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.54
PRK05368302 homoserine O-succinyltransferase; Provisional 99.51
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.49
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.47
KOG0370|consensus 1435 99.41
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 99.37
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.27
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 99.08
KOG0623|consensus 541 98.95
KOG2387|consensus585 98.9
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 98.66
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 98.52
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 98.5
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 98.45
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 98.08
COG0311194 PDX2 Predicted glutamine amidotransferase involved 97.83
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 97.78
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 97.77
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 97.74
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 97.72
PF04204298 HTS: Homoserine O-succinyltransferase ; InterPro: 97.65
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 97.61
cd03131175 GATase1_HTS Type 1 glutamine amidotransferase (GAT 97.18
PHA033661304 FGAM-synthase; Provisional 97.05
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 96.91
TIGR01001300 metA homoserine O-succinyltransferase. The apparen 96.85
KOG3210|consensus226 96.57
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 96.12
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 95.75
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 95.5
KOG1907|consensus1320 95.1
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 93.13
COG1897307 MetA Homoserine trans-succinylase [Amino acid tran 93.09
TIGR00313475 cobQ cobyric acid synthase CobQ. 92.78
PRK00784488 cobyric acid synthase; Provisional 91.74
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 89.62
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 88.39
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 87.86
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 87.39
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 87.35
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 85.03
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 82.88
COG3442250 Predicted glutamine amidotransferase [General func 82.22
>KOG1559|consensus Back     alignment and domain information 
Probab=100.00  E-value=1.5e-49  Score=315.79  Aligned_cols=196  Identities=35%  Similarity=0.675  Sum_probs=180.4

Q ss_pred             CCCCCcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEecc-CCCccccccCChhHHHHhhhcceeeeeeeeeE
Q psy15935          2 NSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKN-GSKTGLYKTFPKKSLKALAKNNITYNYHIWCI   80 (202)
Q Consensus         2 n~~g~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~-~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v   80 (202)
                      ||+|+++||+|||+||++|..++.-++.++...+..+...+++++.. ...++||+.+|++++..|..++.++++|.+++
T Consensus       142 nDaGehFPvyg~CLGFE~lsmiISqnrdile~~d~vd~AssLqF~~nvn~~~t~FQrFPpELLkkL~~dcLvmq~Hk~gi  221 (340)
T KOG1559|consen  142 NDAGEHFPVYGICLGFELLSMIISQNRDILERFDAVDVASSLQFVGNVNIHGTMFQRFPPELLKKLSTDCLVMQNHKFGI  221 (340)
T ss_pred             cCCccccchhhhhhhHHHHHHHHhcChhHHHhhcccccccceeeecccceeehhHhhCCHHHHHHhccchheeecccccc
Confidence            89999999999999999999985658888888887777888999864 34689999999999999999999999999999


Q ss_pred             eecccccc-cCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHH
Q psy15935         81 TRATMNST-KLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTE  159 (202)
Q Consensus        81 ~~~~~~~~-~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~  159 (202)
                      +|.+|+.+ .|.+.|.|+.++.|.++.+||++++.+.||++|+|||||+.++||+. ..+||++++++++|+.|++|+++
T Consensus       222 sp~nF~~N~~Ls~FFnilTT~~D~~~k~fvSTv~~~kYPvtgfQWHPEKnafEWgs-s~IpHsedAiqvtqhaA~~lVsE  300 (340)
T KOG1559|consen  222 SPKNFQGNPALSSFFNILTTCTDGNSKTFVSTVESKKYPVTGFQWHPEKNAFEWGS-SDIPHSEDAIQVTQHAANYLVSE  300 (340)
T ss_pred             chhhccCCHHHHHHHhheeeecCCCceEEEEeecceeccceeeeecCccCcccccc-CCCCCChhHHHHHHHHHHHHHHH
Confidence            99999999 99999999999977778899999999999999999999999999997 56999999999999999999999


Q ss_pred             HHhCCCCCCChHhhhhhcccccceeeecCCCCC-CCeeEEeecC
Q psy15935        160 ASKNKHAYPSHADLYKEVIYNYAPTMSYPLNNK-TSFEQIYFFD  202 (202)
Q Consensus       160 ar~~~~~f~~~~e~~~~li~n~~~~~~~~~~~~-~~~~~~y~f~  202 (202)
                      |||+.|+++|. ++.+.|||||+|+|+   |-. .+|.|||||+
T Consensus       301 ARKs~nrp~Se-kvlsnLIYnykPtY~---Gy~gsg~devYIFt  340 (340)
T KOG1559|consen  301 ARKSLNRPESE-KVLSNLIYNYKPTYC---GYAGSGYDEVYIFT  340 (340)
T ss_pred             HHhhcCCccHH-HHHHHHHhccCccee---ccccCccceEEeeC
Confidence            99999999765 778889999999999   844 7899999996

>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>KOG0026|consensus Back     alignment and domain information
>KOG3179|consensus Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>KOG1622|consensus Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>PLN02327 CTP synthase Back     alignment and domain information
>KOG1224|consensus Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>KOG0370|consensus Back     alignment and domain information
>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>KOG0623|consensus Back     alignment and domain information
>KOG2387|consensus Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>TIGR01001 metA homoserine O-succinyltransferase Back     alignment and domain information
>KOG3210|consensus Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>KOG1907|consensus Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
1l9x_A315 Structure Of Gamma-Glutamyl Hydrolase Length = 315 7e-28
>pdb|1L9X|A Chain A, Structure Of Gamma-Glutamyl Hydrolase Length = 315 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (300), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 113/200 (56%), Gaps = 8/200 (4%)
Query: 5   GDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLK 64
           GDYFP+ G CLGFE L  + + E  L T  +     + L F      + +++ FP + L 
Sbjct: 122 GDYFPVWGTCLGFEELSLLISGEC-LLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLL 180
Query: 65  ALAKNNITYNYHIWCITRA--TMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGI 122
           +LA   +T N+H W ++    TMN  KL   +++LT +  G   +F+ST++  KYP  G+
Sbjct: 181 SLAVEPLTANFHKWSLSVKNFTMNE-KLKKFFNVLTTNTDGK-IEFISTMEGYKYPVYGV 238
Query: 123 QFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNYA 182
           Q+HPEK  YEW  +  ++H+  A++T+    ++ V EA KN H + S ++  K +IY ++
Sbjct: 239 QWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQFS 298
Query: 183 PTMSYPLNNKTSFEQIYFFD 202
           P  +    N +SF+Q Y FD
Sbjct: 299 PIYT---GNISSFQQCYIFD 315

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query202
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 1e-47
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Length = 315 Back     alignment and structure
 Score =  157 bits (399), Expect = 1e-47
 Identities = 65/203 (32%), Positives = 111/203 (54%), Gaps = 6/203 (2%)

Query: 1   MNSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPK 60
               GDYFP+ G CLGFE L  + +  + L T  +     + L F      + +++ FP 
Sbjct: 118 SFDDGDYFPVWGTCLGFEELSLLISG-ECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPT 176

Query: 61  KSLKALAKNNITYNYHIWCITRATM-NSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPF 119
           + L +LA   +T N+H W ++      + KL   +++LT +  G   +F+ST++  KYP 
Sbjct: 177 ELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDG-KIEFISTMEGYKYPV 235

Query: 120 VGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIY 179
            G+Q+HPEK  YEW  +  ++H+  A++T+    ++ V EA KN H + S ++  K +IY
Sbjct: 236 YGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIY 295

Query: 180 NYAPTMSYPLNNKTSFEQIYFFD 202
            ++P  +  +   +SF+Q Y FD
Sbjct: 296 QFSPIYTGNI---SSFQQCYIFD 315

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 100.0
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 99.9
1i1q_B192 Anthranilate synthase component II; tryptophan bio 99.88
2a9v_A212 GMP synthase; structural genomics, joint center fo 99.88
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 99.88
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 99.87
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 99.86
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 99.85
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 99.85
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.85
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 99.84
3uow_A 556 GMP synthetase; structural genomics consortium, SG 99.83
3l7n_A236 Putative uncharacterized protein; glutamine amidot 99.82
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 99.82
3m3p_A250 Glutamine amido transferase; structural genomics, 99.82
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 99.81
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 99.81
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.8
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 99.79
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 99.74
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 99.73
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.72
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.71
1vco_A550 CTP synthetase; tetramer, riken structural genomic 99.67
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 99.66
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 99.64
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 99.64
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 99.63
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.62
1q7r_A219 Predicted amidotransferase; structural genomics, Y 99.59
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 99.57
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 99.56
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 99.55
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 99.49
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 99.48
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 98.31
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 92.36
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 91.55
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 80.52
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
Probab=100.00  E-value=1.6e-44  Score=305.45  Aligned_cols=194  Identities=34%  Similarity=0.667  Sum_probs=164.8

Q ss_pred             CCCcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEeec
Q psy15935          4 RGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCITRA   83 (202)
Q Consensus         4 ~g~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~~~   83 (202)
                      +|+++||||||+|||+|+.+ +||++.+...+.++...|++.+.....++||+.++..+.+.+.+...++++|+++|.++
T Consensus       121 ~g~~~PiLGIC~G~Qll~~a-~GG~~~~~~~~~~g~~~p~~~~~~~~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~  199 (315)
T 1l9x_A          121 DGDYFPVWGTCLGFEELSLL-ISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVK  199 (315)
T ss_dssp             TTCCCCEEEETHHHHHHHHH-HHSSCCCEEEEEEEEEECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHH
T ss_pred             cCCCceEEEEChHHHHHHHH-hCCccccccccccCCCCCeeeccCCCCChHHHhcChhhhhhccccceEEEhhhhhcCcc
Confidence            45579999999999999999 99987665544455556777765556889999999888777777777788999999876


Q ss_pred             ccccc-cCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHHHh
Q psy15935         84 TMNST-KLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASK  162 (202)
Q Consensus        84 ~~~~~-~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~ar~  162 (202)
                      .+.++ .|+++++++|++ +++..++|++++++++|++|||||||+..++|+....++|+.++++.++.+.+.|+++||+
T Consensus       200 ~~~~~~~l~~g~~v~A~s-~dg~ve~i~~i~~~~~~i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~  278 (315)
T 1l9x_A          200 NFTMNEKLKKFFNVLTTN-TDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARK  278 (315)
T ss_dssp             HHHTCHHHHHHEEEEEEE-ESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccCCCCEEEEEc-CCCCEEEEEEeccCCCCEEEEEeCCCCCcccccccccCCccHHHHHHHHHHHHHHHHHHHh
Confidence            55444 588999999998 4445788889999888999999999999999975446799999999999999999999999


Q ss_pred             CCCCCCChHhhhhhcccccceeeecCCCCCCCeeEEeecC
Q psy15935        163 NKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD  202 (202)
Q Consensus       163 ~~~~f~~~~e~~~~li~n~~~~~~~~~~~~~~~~~~y~f~  202 (202)
                      +.|+|++.+++.+.|||||+|+|+   +...+|+|||||+
T Consensus       279 ~~~~f~~~~~~~~~liyn~~p~~~---~~~~~~~q~y~f~  315 (315)
T 1l9x_A          279 NNHHFKSESEEEKALIYQFSPIYT---GNISSFQQCYIFD  315 (315)
T ss_dssp             SCCCCSSHHHHHHHSGGGCCCEEC---TTTSSCSEEEEEC
T ss_pred             ccCCCCCHHHHHHhhhccCCCEec---CCCCCeeEEEeeC
Confidence            999999999999999999999999   6547799999996
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 202
d1l9xa_288 c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Ho 3e-37
d2abwa1218 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protei 3e-05
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 3e-37
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 4/201 (1%)

Query: 2   NSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKK 61
              GDYFP+ G CLGFE L  +    + L T  +     + L F      + +++ FP +
Sbjct: 92  FDDGDYFPVWGTCLGFEEL-SLLISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTE 150

Query: 62  SLKALAKNNITYNYHIWCITRATMNSTKLSDAWDILTESKAGNGKKFVSTVQSKKYPFVG 121
            L +LA   +T N+H W ++       +    +  +  +      +F+ST++  KYP  G
Sbjct: 151 LLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYG 210

Query: 122 IQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEASKNKHAYPSHADLYKEVIYNY 181
           +Q+HPEK  YEW  +  ++H+  A++T+    ++ V EA KN H + S ++  K +IY +
Sbjct: 211 VQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARKNNHHFKSESEEEKALIYQF 270

Query: 182 APTMSYPLNNKTSFEQIYFFD 202
           +P  +    N +SF+Q Y FD
Sbjct: 271 SPIYT---GNISSFQQCYIFD 288
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query202
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 100.0
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 99.9
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 99.89
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 99.89
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 99.88
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 99.88
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 99.86
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 99.81
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.7
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.69
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.66
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.62
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.59
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 99.54
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.52
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 99.5
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 99.4
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 98.53
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-51  Score=339.71  Aligned_cols=196  Identities=33%  Similarity=0.656  Sum_probs=178.3

Q ss_pred             CCCCCcccEEeEcHHHHHHHhhhcCCeeccccCCccceeeeeeEeccCCCccccccCChhHHHHhhhcceeeeeeeeeEe
Q psy15935          2 NSRGDYFPILGICLGFELLLFVENKEKELRTDCNCFHENLSLRFLKNGSKTGLYKTFPKKSLKALAKNNITYNYHIWCIT   81 (202)
Q Consensus         2 n~~g~~~PilGIC~G~QlL~~~~~gg~~~~~~~~~~~~~~~i~~~~~~~~s~lf~~~~~~~~~~~~~~~~~~~~H~~~v~   81 (202)
                      |+.|+++||||||+|||+|+.+ +||++.+......+...++..+.....+.++..++..+...+.+...++++|+++|.
T Consensus        92 ~~~~~~~PilGIC~G~Qll~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~H~~~v~  170 (288)
T d1l9xa_          92 FDDGDYFPVWGTCLGFEELSLL-ISGECLLTATDTVDVAMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLS  170 (288)
T ss_dssp             HHTTCCCCEEEETHHHHHHHHH-HHSSCCCEEEEEEEEEECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECB
T ss_pred             HHhhCCCCeEEEcHHHHHHHHH-hCCEeeccccCcCCcceeEEecCCCccceeEeecccchhhhccCCceEEEecccEEE
Confidence            5678999999999999999999 999987776666676777877777778899999999999889999999999999999


Q ss_pred             ecccccc-cCCCcceEeeeeecCCCceeEEEEeecCCCEEEEeeeCCccCcccccccCCCCCHHHHHHHHHHHHHHHHHH
Q psy15935         82 RATMNST-KLSDAWDILTESKAGNGKKFVSTVQSKKYPFVGIQFHPEKNSYEWNTVAHVNHSRIAIETSRLFYDWIVTEA  160 (202)
Q Consensus        82 ~~~~~~~-~L~~~~~vla~s~~~~~~~~v~~i~~~~~pi~gvQfHPE~~~~e~~~~~~~~h~~~~~~~~~~~~~~f~~~a  160 (202)
                      +..+... .|+++++++|++ .+++.++|++++++++|+||+|||||++++||.+...++|+.++++++|++++||+++|
T Consensus       171 ~~~~~~~~~l~~~~~v~a~s-~d~~~e~I~~ie~~~~pi~GvQfHPEk~~fE~~~~~~~~H~~~~~~~~~~~~~ffv~~~  249 (288)
T d1l9xa_         171 VKNFTMNEKLKKFFNVLTTN-TDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEA  249 (288)
T ss_dssp             HHHHHTCHHHHHHEEEEEEE-ESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecccchhhhcCCceEEEEEE-CCCCeEEEEEEEcCCCcEEEEEcCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            8777666 789999999998 45677899999999999999999999999999877789999999999999999999999


Q ss_pred             HhCCCCCCChHhhhhhcccccceeeecCCCCCCCeeEEeecC
Q psy15935        161 SKNKHAYPSHADLYKEVIYNYAPTMSYPLNNKTSFEQIYFFD  202 (202)
Q Consensus       161 r~~~~~f~~~~e~~~~li~n~~~~~~~~~~~~~~~~~~y~f~  202 (202)
                      |||+|+|.+.+|+.+.|||||+|+|+   ++.++|+|||||+
T Consensus       250 rkn~~~f~~~~~~~~~lI~ny~pv~~---~~~~~~~q~Y~f~  288 (288)
T d1l9xa_         250 RKNNHHFKSESEEEKALIYQFSPIYT---GNISSFQQCYIFD  288 (288)
T ss_dssp             TTSCCCCSSHHHHHHHSGGGCCCEEC---TTTSSCSEEEEEC
T ss_pred             HhccCCCCCHHHHHHHhhcCCCcEEe---cCCCceEEEEeeC
Confidence            99999999999999999999999999   7667899999996
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure