Psyllid ID: psy16319

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240------
Protein Sequence
MTLMRDQMQYSTLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK
Secondary Structure (PSIPRED)
cccccccccEEEEEEccccccccccccccccccccEEcccEEcEEEEEcccEEEEEEEcccccEEEEEEcccccccEEcccccEEEEEEEEEccccccEEEcccEEEEEEEEEEEccccccccccEEEEEEEEcccccEEccEEEEEEccccccccEEEEEEccccEEEEEEcccccccccEEEcccEEEEEEEEEcccccccEEEEEEEEEccccccEEEEEcccccccccccccccEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEccccccEEEEEEcccccEEEEccccEEEEEEEcccccccccEcccccEEEEEEEEEEccEEEEEcccEEEEEEEEcccccEEEEEEEEcccccccccccccccccccccEEEEEEccccccEEEEEEccEEEEEEEEccccccEEEEEEEEEEEccccccEEEEEcccccccccHHcccccccccccc
Coil and Loop (DISEMBL)
mtlmrdqmQYSTLFDLAsscsslqdpylDVAEAQTYELSACYNVSIDCRSGDMVARIktnklfdgkiyakgspnscvqdIKGSLDFELEMAfddvecnvkhqglgrymnDVVIQHHDtiitssdlgLAVTCQydltnktvsnevdlgvqgdvkSALTEEVvvdspnvamkitdrsgadvkpsaevgdplalrfeildpnspyeIFVRELVAmdgvdsseivlidsngcptdhfimgplykaadtgk
Flexible Loop (DISEMBL)
MTLMRDQMQYSTLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKlfdgkiyakgspnscVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTnktvsnevDLGVQGDVKSALteevvvdspnvamkitdrsgadvkpsAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK
Low Complexity Region (SEG)
MTLMRDQMQYSTLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK
Disordered region (IsUnstruct)
**********STLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDS**V******************GDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYK******
Disordered Region (DISOPRED)
******QMQYSTLFDLASS*************AQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKI*****ADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMG**********
Disordered Region (DISEMBL)
********QYSTLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITD*********AEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK
Disordered Region (DISPRO)
*****************SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKA*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTLMRDQMQYSTLFDLASSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	246	2.2.26 [Sep-21-2011]
Q03755	424	Cuticlin-1 OS=Caenorhabdi	no	N/A	0.764	0.443	0.228	0.0007

>sp|Q03755|CUT1_CAEEL Cuticlin-1 OS=Caenorhabditis elegans GN=cut-1 PE=2 SV=2

 Score = 44.3 bits (103), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 82/210 (39%), Gaps = 22/210 (10%)

Query: 46  IDCRSGDMVARIKTNKLFDGKIYAKG--SPNSCVQDIKGSLDFELEMAFDDVECNVKHQG 103
           ++C    +     T   F+G +Y KG      C  D  G     +E+ FD   CN     
Sbjct: 31  VECGPNSITVNFNTRNPFEGHVYVKGLYDQAGCRSDEGGRQVAGIELPFDS--CNTART- 87

Query: 104 LGRYMN--------DVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSA 155
             R +N         VVI  H   +T  D    + C Y  ++KTVS ++++    D+ +A
Sbjct: 88  --RSLNPKGVFVSTTVVISFHPQFVTKVDRAYRIQCFYMESDKTVSTQIEV---SDLTTA 142

Query: 156 LTEEVVVDSPNVAMKITDRSGADVKP--SAEVGDPLALRFEILDPNSPYEIFVRELVAMD 213
              + VV  P    +I D  G   +P   A +G  +  ++      +     V     +D
Sbjct: 143 FQTQ-VVPMPVCKYEILD-GGPSGQPIQFATIGQQVYHKWTCDSETTDTFCAVVHSCTVD 200

Query: 214 GVDSSEIVLIDSNGCPTDHFIMGPLYKAAD 243
             +   + +++  GC  D F++  L    D
Sbjct: 201 DGNGDTVQILNEEGCALDKFLLNNLEYPTD 230

Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment.
Caenorhabditis elegans (taxid: 6239)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
193676548	678	PREDICTED: hypothetical protein LOC10016	0.906	0.328	0.869	1e-116
307197573	509	hypothetical protein EAI_13083 [Harpegna	0.930	0.449	0.820	1e-111
332018879	507	hypothetical protein G5I_12415 [Acromyrm	0.930	0.451	0.812	1e-110
350401677	710	PREDICTED: hypothetical protein LOC10074	0.918	0.318	0.823	1e-110
48132776	708	PREDICTED: hypothetical protein LOC41325	0.918	0.319	0.818	1e-109
380029662	708	PREDICTED: uncharacterized protein LOC10	0.918	0.319	0.818	1e-109
383858736	710	PREDICTED: uncharacterized protein LOC10	0.918	0.318	0.814	1e-109
340718339	711	PREDICTED: hypothetical protein LOC10064	0.918	0.317	0.814	1e-109
91079482	687	PREDICTED: similar to AGAP002316-PA [Tri	0.910	0.326	0.830	1e-109
322797303	225	hypothetical protein SINV_13255 [Solenop	0.910	0.995	0.821	1e-109

>gi|193676548|ref|XP_001948360.1| PREDICTED: hypothetical protein LOC100169340 [Acyrthosiphon pisum]

 Score =  422 bits (1084), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 194/223 (86%), Positives = 218/223 (97%)

Query: 23  LQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKG 82
           +QDPYL+V EA TYEL++CYN+SI+CRSGDMVARIKT+KLF+GKIYAKG+PNSCVQD++G
Sbjct: 271 IQDPYLEVPEASTYELNSCYNISIECRSGDMVARIKTSKLFNGKIYAKGNPNSCVQDVRG 330

Query: 83  SLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSN 142
           SLDFELEMA+DDVECNVK QGLGRYMNDV+IQHHDTIITSSDLG+A+TCQYDLTNKTVSN
Sbjct: 331 SLDFELEMAYDDVECNVKQQGLGRYMNDVIIQHHDTIITSSDLGVAITCQYDLTNKTVSN 390

Query: 143 EVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPY 202
           EVDLG+QGD+K A+TEEV+VDSPNVAMKITDR GADVKPSAEVGDPLALRFEILDPNSPY
Sbjct: 391 EVDLGIQGDLKPAMTEEVIVDSPNVAMKITDRQGADVKPSAEVGDPLALRFEILDPNSPY 450

Query: 203 EIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTG 245
           EIFVRELVAMDGVDSSEIVLID++GCPTDHFIMGPLYK++D+G
Sbjct: 451 EIFVRELVAMDGVDSSEIVLIDADGCPTDHFIMGPLYKSSDSG 493

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307197573|gb|EFN78784.1| hypothetical protein EAI_13083 [Harpegnathos saltator]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/229 (82%), Positives = 213/229 (93%)

Query: 18  SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCV 77
           ++ S +Q+PYLDV EA TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+YAKGSPNSCV
Sbjct: 91  ATLSDIQEPYLDVPEASTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYAKGSPNSCV 150

Query: 78  QDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTN 137
           QD+KG+L+FEL MA+DD+ECN++ QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTN
Sbjct: 151 QDVKGALEFELRMAYDDLECNIRQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTN 210

Query: 138 KTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILD 197
           KTVSNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG D  PSAEVGDPLAL+FEILD
Sbjct: 211 KTVSNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNDAIPSAEVGDPLALKFEILD 270

Query: 198 PNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PNSPYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 271 PNSPYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 319

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018879|gb|EGI59428.1| hypothetical protein G5I_12415 [Acromyrmex echinatior]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/229 (81%), Positives = 213/229 (93%)

Query: 18  SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCV 77
           ++ S +Q+PYLDV EA TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+YAKGSPNSCV
Sbjct: 91  ATLSDIQEPYLDVPEAATYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYAKGSPNSCV 150

Query: 78  QDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTN 137
           QDIKG+L+FEL MA+DD+ECN++ QGLGRY+NDV+IQHHDTI+TSSDLGLAVTCQYDLTN
Sbjct: 151 QDIKGALEFELRMAYDDLECNIRQQGLGRYLNDVIIQHHDTIVTSSDLGLAVTCQYDLTN 210

Query: 138 KTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILD 197
           KTVSNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILD
Sbjct: 211 KTVSNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILD 270

Query: 198 PNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           P+SPYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 271 PHSPYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 319

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401677|ref|XP_003486225.1| PREDICTED: hypothetical protein LOC100749749 [Bombus impatiens]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 186/226 (82%), Positives = 209/226 (92%)

Query: 21  SSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDI 80
           S +Q+PYLDV E  TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+Y KGSPNSCVQD+
Sbjct: 298 SDIQEPYLDVPEGSTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYVKGSPNSCVQDV 357

Query: 81  KGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTV 140
           KG+L+FEL MA+DD+ECN+K QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTNKTV
Sbjct: 358 KGALEFELRMAYDDLECNIKQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTV 417

Query: 141 SNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNS 200
           SNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILDPNS
Sbjct: 418 SNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILDPNS 477

Query: 201 PYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 478 PYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 523

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48132776|ref|XP_396702.1| PREDICTED: hypothetical protein LOC413256 isoform 1 [Apis mellifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/226 (81%), Positives = 210/226 (92%)

Query: 21  SSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDI 80
           S +Q+PYLDV E  TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+Y KGSPNSCVQD+
Sbjct: 298 SDIQEPYLDVPEGSTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYVKGSPNSCVQDV 357

Query: 81  KGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTV 140
           KG+L+FEL+MA+DD+ECN++ QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTNKTV
Sbjct: 358 KGALEFELKMAYDDLECNIRQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTV 417

Query: 141 SNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNS 200
           SNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILDPNS
Sbjct: 418 SNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILDPNS 477

Query: 201 PYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 478 PYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 523

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029662|ref|XP_003698486.1| PREDICTED: uncharacterized protein LOC100866750 [Apis florea]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 185/226 (81%), Positives = 210/226 (92%)

Query: 21  SSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDI 80
           S +Q+PYLDV E  TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+Y KGSPNSCVQD+
Sbjct: 298 SDIQEPYLDVPEGSTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYVKGSPNSCVQDV 357

Query: 81  KGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTV 140
           KG+L+FEL+MA+DD+ECN++ QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTNKTV
Sbjct: 358 KGALEFELKMAYDDLECNIRQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTV 417

Query: 141 SNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNS 200
           SNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILDPNS
Sbjct: 418 SNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILDPNS 477

Query: 201 PYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 478 PYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 523

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858736|ref|XP_003704855.1| PREDICTED: uncharacterized protein LOC100880943 [Megachile rotundata]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/226 (81%), Positives = 209/226 (92%)

Query: 21  SSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDI 80
           S +Q+PYLDV E  TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+Y KGSPNSCVQD+
Sbjct: 298 SDIQEPYLDVPEGSTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYVKGSPNSCVQDV 357

Query: 81  KGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTV 140
           KG+L+FEL MA+DD+ECN++ QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTNKTV
Sbjct: 358 KGALEFELRMAYDDLECNIRQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTV 417

Query: 141 SNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNS 200
           SNEVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  P+AEVGDPLAL+FEILDPNS
Sbjct: 418 SNEVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPTAEVGDPLALKFEILDPNS 477

Query: 201 PYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 478 PYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 523

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340718339|ref|XP_003397626.1| PREDICTED: hypothetical protein LOC100645878 [Bombus terrestris]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/226 (81%), Positives = 209/226 (92%)

Query: 21  SSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDI 80
           S +Q+PYLDV E  TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+Y KGSPNSCVQD+
Sbjct: 299 SDIQEPYLDVPEGSTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYVKGSPNSCVQDV 358

Query: 81  KGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTV 140
           KG+L+FEL MA+DD+ECN++ QGLGRY+NDVVIQHHDTI+TSSDLGLAVTCQYDLTNKTV
Sbjct: 359 KGALEFELRMAYDDLECNIRQQGLGRYLNDVVIQHHDTIVTSSDLGLAVTCQYDLTNKTV 418

Query: 141 SNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNS 200
           SNEVDLGV G++  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILDPNS
Sbjct: 419 SNEVDLGVHGEITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILDPNS 478

Query: 201 PYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           PYEIFVRELVAMDGVDSSEIVLIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 479 PYEIFVRELVAMDGVDSSEIVLIDSDGCPTDHVIMGPLYKSATTGK 524

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079482|ref|XP_968199.1| PREDICTED: similar to AGAP002316-PA [Tribolium castaneum] gi|270004412|gb|EFA00860.1| hypothetical protein TcasGA2_TC003763 [Tribolium castaneum]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/224 (83%), Positives = 210/224 (93%)

Query: 23  LQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKG 82
           +QDPYL+V EA TYELS+CYNVSIDCRSGDMVARI+T+KLFDGKIYAKGSPNSCV+D+  
Sbjct: 291 IQDPYLEVPEAATYELSSCYNVSIDCRSGDMVARIQTSKLFDGKIYAKGSPNSCVRDVNN 350

Query: 83  SLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSN 142
           SL+FEL MAFD++ECNV+  GLGRY+NDVVIQHHD I+TSSDLGLAVTCQYDLTNK+V+N
Sbjct: 351 SLEFELSMAFDNLECNVRKNGLGRYINDVVIQHHDKIVTSSDLGLAVTCQYDLTNKSVTN 410

Query: 143 EVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPY 202
           EVDLGV GD++ AL+EEV VDSPNVAMKITDRSG DV PSAEVGDPLALRFEI+D NSPY
Sbjct: 411 EVDLGVHGDIQPALSEEVTVDSPNVAMKITDRSGGDVMPSAEVGDPLALRFEIMDKNSPY 470

Query: 203 EIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           EIFVRELVAMDGVDSSEIVLIDS+GCPTDHFIMGP+YK+A++GK
Sbjct: 471 EIFVRELVAMDGVDSSEIVLIDSDGCPTDHFIMGPIYKSAESGK 514

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322797303|gb|EFZ19430.1| hypothetical protein SINV_13255 [Solenopsis invicta]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/224 (82%), Positives = 209/224 (93%)

Query: 23  LQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCVQDIKG 82
            Q+PYLDV EA TYELS+CYNV+IDCR+GDMV RI+T+KLF GK+YAKGSPNSCVQDIKG
Sbjct: 1   FQEPYLDVPEASTYELSSCYNVTIDCRAGDMVTRIQTSKLFYGKVYAKGSPNSCVQDIKG 60

Query: 83  SLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSN 142
           +L+FEL MA+DD+ECN++ QGLGRY+NDV+IQHHDTI+TSSDLGLAVTCQYDLTNKTVSN
Sbjct: 61  ALEFELRMAYDDLECNIRQQGLGRYLNDVIIQHHDTIVTSSDLGLAVTCQYDLTNKTVSN 120

Query: 143 EVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPY 202
           EVDLGV GD+  AL+EEV+VDSPNVAMKITDRSG +  PSAEVGDPLAL+FEILDP+SPY
Sbjct: 121 EVDLGVHGDITPALSEEVIVDSPNVAMKITDRSGNEAIPSAEVGDPLALKFEILDPHSPY 180

Query: 203 EIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
           EIFVRELVAMDGVDSSEI+LIDS+GCPTDH IMGPLYK+A TGK
Sbjct: 181 EIFVRELVAMDGVDSSEIILIDSDGCPTDHVIMGPLYKSATTGK 224

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	246
FB|FBgn0039852	805	nyo "nyobe" [Drosophila melano	0.930	0.284	0.672	2.6e-86
FB|FBgn0039704	744	neo "neyo" [Drosophila melanog	0.930	0.307	0.672	4.3e-86
FB|FBgn0039851	774	mey "morpheyus" [Drosophila me	0.930	0.295	0.668	1e-84
FB|FBgn0029128	715	tyn "trynity" [Drosophila mela	0.853	0.293	0.301	2e-23
WB|WBGene00008482	507	cut-4 [Caenorhabditis elegans	0.760	0.368	0.268	4.1e-10
WB|WBGene00011443	384	cutl-11 [Caenorhabditis elegan	0.764	0.489	0.265	1.2e-09
FB|FBgn0020521	462	pio "piopio" [Drosophila melan	0.455	0.242	0.338	3.9e-09
FB|FBgn0016047	1557	nompA "no mechanoreceptor pote	0.926	0.146	0.275	1.3e-08
WB|WBGene00022816	2687	fbn-1 [Caenorhabditis elegans	0.804	0.073	0.253	7.2e-08
WB|WBGene00013180	403	cutl-10 [Caenorhabditis elegan	0.760	0.464	0.241	2.9e-07

FB|FBgn0039852 nyo "nyobe" [Drosophila melanogaster (taxid:7227)]

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 154/229 (67%), Positives = 193/229 (84%)

Query:    18 SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCV 77
             ++ + + DPYLDV EA TYELSACYNVSI+CRSG+M+ +I+T+KLFDGK+YAKG+P SC 
Sbjct:   353 ATLTDVMDPYLDVPEAATYELSACYNVSIECRSGEMITKIRTSKLFDGKVYAKGAPKSCA 412

Query:    78 QDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTN 137
              ++  SL+F+  M ++D+ECNV+    GRYMND+VIQHHD I+TSSDLGLAV+CQYDLTN
Sbjct:   413 VNVNNSLEFDFRMGYNDLECNVRQSAYGRYMNDIVIQHHDMIVTSSDLGLAVSCQYDLTN 472

Query:   138 KTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILD 197
             KTV N+VDLGV G+++S+L+EE+ +DSPNV MKIT R G+D+K  AEVGDPLALRFEI++
Sbjct:   473 KTVLNDVDLGVTGEIESSLSEEITIDSPNVIMKITSRDGSDMKRMAEVGDPLALRFEIVE 532

Query:   198 PNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
             PNSPYEIFVRELVAMDG DS+EI LID+NGCPTD +IMG + K A   K
Sbjct:   533 PNSPYEIFVRELVAMDGSDSAEITLIDANGCPTDQYIMGTIQKLAQNRK 581

GO:0016476 "regulation of embryonic cell shape" evidence=IMP

GO:0016021 "integral to membrane" evidence=ISM

GO:0003383 "apical constriction" evidence=IMP

FB|FBgn0039704 neo "neyo" [Drosophila melanogaster (taxid:7227)]

 Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
 Identities = 154/229 (67%), Positives = 196/229 (85%)

Query:    18 SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCV 77
             ++ + +Q+P+L+V EA TYEL++CYNV+I+C  GDM+ARI+T+KLF+GK+YAKGSP SC 
Sbjct:   352 ATLADVQEPFLEVPEASTYELTSCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSCS 411

Query:    78 QDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTN 137
              D+K +LDFEL M + D+ECNV+    GRY+ND++IQHHD I+TSSDLGLA+ CQYDLTN
Sbjct:   412 VDVKSALDFELRMNYHDLECNVRQSTAGRYVNDIIIQHHDMIVTSSDLGLALACQYDLTN 471

Query:   138 KTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILD 197
             K+VSN VDL V+GD+  AL+EEV+V+SPNV M+IT R G+D+  SAEVGDPLAL+FEI+D
Sbjct:   472 KSVSNGVDLDVRGDIMPALSEEVIVESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVD 531

Query:   198 PNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
               SPYEIF+RELVAMDGVD+SEI LIDSNGCPTDHFIMGP+YK + +GK
Sbjct:   532 EQSPYEIFIRELVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGK 580

GO:0016476 "regulation of embryonic cell shape" evidence=IMP

GO:0016021 "integral to membrane" evidence=ISM

GO:0003383 "apical constriction" evidence=IMP

FB|FBgn0039851 mey "morpheyus" [Drosophila melanogaster (taxid:7227)]

 Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
 Identities = 153/229 (66%), Positives = 191/229 (83%)

Query:    18 SSCSSLQDPYLDVAEAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGSPNSCV 77
             ++ + L +PYL + EA TYE SACYNVSIDCRSG+M+ +I+T+KLFDGK+YAKG+P SC 
Sbjct:   378 ATLTDLSEPYLSIEEAATYEQSACYNVSIDCRSGEMITKIRTSKLFDGKVYAKGAPKSCA 437

Query:    78 QDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTN 137
              ++  SL+F+L+M ++D+ECNV+    GRYMND+VIQHHD I+TSSDLGLAV+CQYDLTN
Sbjct:   438 VNVNNSLEFDLKMRYNDLECNVRQSAYGRYMNDIVIQHHDMIVTSSDLGLAVSCQYDLTN 497

Query:   138 KTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILD 197
             KTV N VDLGV G+++S L+EE++VDSPNV MKIT R G+D+K  AEVGDPLALRFEI+D
Sbjct:   498 KTVVNNVDLGVTGEIESTLSEEIIVDSPNVIMKITARDGSDMKRIAEVGDPLALRFEIVD 557

Query:   198 PNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYKAADTGK 246
              NSPYEIFVRELVAMDG DS+EI LID+NGCPTD +IM  + K A+  K
Sbjct:   558 ANSPYEIFVRELVAMDGTDSAEITLIDANGCPTDQYIMSAMQKLANNRK 606

GO:0016021 "integral to membrane" evidence=ISM

GO:0016476 "regulation of embryonic cell shape" evidence=IMP

GO:0003383 "apical constriction" evidence=IMP

FB|FBgn0029128 tyn "trynity" [Drosophila melanogaster (taxid:7227)]

 Score = 279 (103.3 bits), Expect = 2.0e-23, P = 2.0e-23
 Identities = 66/219 (30%), Positives = 112/219 (51%)

Query:    16 LASSCSSLQDPYLDVA---EAQTYELSACYNVSIDCRSGDMVARIKTNKLFDGKIYAKGS 72
             L  S  +++DP L      +    +   CY+VS+ C+   +  +++TNK F+G+IYA G 
Sbjct:   348 LPVSLDTIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIAVQVRTNKPFNGRIYALGR 407

Query:    73 PNSCVQDIKGSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQ 132
               +C  D+  S  F L++     +CN +    G Y N VV+QHH  ++T +D    V C 
Sbjct:   408 SETCNIDVINSDAFRLDLTMAGQDCNTQSV-TGVYSNTVVLQHHSVVMTKADKIYKVKCT 466

Query:   133 YDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALR 192
             YD+++K ++  + + ++      +        P +  +I D    +V+ +  +GD L  R
Sbjct:   467 YDMSSKNITFGM-MPIRDPEMIHINSSPEAPPPRI--RILDTRQREVE-TVRIGDRLNFR 522

Query:   193 FEILDPNSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTD 231
              EI + ++PY IF R  VAM     +   +ID +GCPTD
Sbjct:   523 IEIPE-DTPYGIFARSCVAMAKDARTSFKIIDDDGCPTD 560

GO:0003674 "molecular_function" evidence=ND

GO:0007160 "cell-matrix adhesion" evidence=IMP

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0003383 "apical constriction" evidence=IMP

GO:0016476 "regulation of embryonic cell shape" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

WB|WBGene00008482 cut-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 158 (60.7 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
 Identities = 55/205 (26%), Positives = 87/205 (42%)

Query:    48 CRSGDMVARIKTNKLFDGKIYAKG--SPNSCVQDIKGSLDFELEMAFDDVECNVKHQGL- 104
             C +  +    KT   F+GK++ KG  S  SC+    G      E+  D   C V+ Q   
Sbjct:    43 CETASISLLFKTRNSFNGKVFVKGYVSEPSCMTVGDGKTGHRFEVRHDS--CGVRRQREI 100

Query:   105 -GRYMN-DVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVV 162
              G  ++  V+I  H   IT  D    V+C Y    K V N VD+       SALT +++ 
Sbjct:   101 NGVVISATVIISFHSIFITKIDRAYRVSCFYVEGTKKVHNHVDI-------SALTTQLLE 153

Query:   163 DS---PNVAMKITDRSGADVKPSAEVGDPLALRFE-ILDPNSPYEIFVRELVAMDGVDSS 218
                  P    +I + +G      A +GD +  ++  + +  + Y + V      DG    
Sbjct:   154 SETQLPVCRYEILNEAGGSPIKYARIGDQVYHKWTCVAELENVYCMKVHSCTVYDGQGGP 213

Query:   219 EIVLIDSNGCPTDHFIMGPLYKAAD 243
              + +ID+NGC  D  I+  L   +D
Sbjct:   214 PVTVIDANGCSVDGVILQNLEYTSD 238

GO:0016021 "integral to membrane" evidence=IEA

WB|WBGene00011443 cutl-11 [Caenorhabditis elegans (taxid:6239)]

 Score = 160 (61.4 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 56/211 (26%), Positives = 87/211 (41%)

Query:    46 IDCRSGDMVARIKTNKLFDGKIYAKGSPN--SCVQDIKGSLDFELEMA---FDDVECNVK 100
             I C +  +  + +T K F+GK+Y KGS N   C  D      F   +     +   CN+ 
Sbjct:    36 IQCNADTIDMQFRTRKQFNGKVYVKGSYNRPECRVDYSTKDQFGRPVGGIKLNHGACNMD 95

Query:   101 HQGL----GRYMNDV-VIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSA 155
              Q +    G   + V +I  H   +T  D    + C Y    +TV+  +D      V + 
Sbjct:    96 RQRMIAPEGMMFSTVLIISFHPLFLTRMDKAYHIRCMYKEAARTVTAAID------VSNL 149

Query:   156 LTEEVVVDSPNVAMKIT---DRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAM 212
              TE V  D P      T   D+    +   A+VGD +  R++    +  Y + V      
Sbjct:   150 PTESVQSDLPMPTCSYTIRRDQLDGPILKYAKVGDQVVHRWQC--DSEDYGLLVHSCYVE 207

Query:   213 DGVDSSEIVLIDSNGCPTDHFIMG-PLYKAA 242
             DG    +++ ID  GC TD  ++G P Y  A
Sbjct:   208 DGQGEKQMI-IDERGCHTDRLLLGDPTYVEA 237

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0020521 pio "piopio" [Drosophila melanogaster (taxid:7227)]

 Score = 106 (42.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
 Identities = 43/127 (33%), Positives = 58/127 (45%)

Query:    21 SSLQDPYLDVAEAQTYELSACY---NVSIDCRSGDMVARIKT---NK---LFDGKIYAKG 71
             SSL D  +  AEA+    S      +V I C SG M+  IK    N    LF G IY KG
Sbjct:    38 SSLSDA-IAAAEAEVASTSKPAVEPSVRIKCLSGSMLITIKDAPPNHETGLFSGMIYPKG 96

Query:    72 -SPNS-CVQDIK---GSLDFELEMAFDDVECNVKHQGLGRYMNDVVIQHHDTIITSSDLG 126
              S NS C+ + +   GSL ++L +   +        G   + N +V+Q H  +IT    G
Sbjct:    97 LSKNSTCLSEYRDHVGSLRYKLPLRSCNTMPKETDDGGIEFFNTIVLQPHLKLITDLGRG 156

Query:   127 LAVTCQY 133
               V C Y
Sbjct:   157 YHVRCAY 163

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0007424 "open tracheal system development" evidence=IMP

GO:0045177 "apical part of cell" evidence=IDA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

FB|FBgn0016047 nompA "no mechanoreceptor potential A" [Drosophila melanogaster (taxid:7227)]

 Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 67/243 (27%), Positives = 96/243 (39%)

Query:    13 LFDLASSCSSLQDP-YLDVAEAQTYELSA------CYNVSIDCRSGDMVARIKTNKLFDG 65
             L D  S    + DP   D +    YE S       C +V+  C    M   I+T + F G
Sbjct:   984 LSDRDSRELDIHDPGTFDASNYDFYERSIGRSDGECMDVTQTCNEEGMEFTIRTPEGFLG 1043

Query:    66 KIYAKGSPNSCVQDIKGSLDFELEMAFDD--VECNVKHQGLGRYMNDVVIQHHDTIITSS 123
             +IY  G  + C     G     L ++      +C  +  G     N VV+Q  D + TS 
Sbjct:  1044 RIYTYGFYDRCFFRGNGGTVNVLRLSGPQGYPDCGTQRYG-DTLTNIVVVQFSDNVQTSR 1102

Query:   124 DLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRSGADVKPSA 183
             D    +TC +    + V +   +G      S +  E +     ++ K+        +P+ 
Sbjct:  1103 DKRYNLTCIFRGPGEAVVSSGYIGAGSG--SPIPIEYLPAENTLSSKVRLSILYQGRPTT 1160

Query:   184 E--VGDPLALRFEILDP-NSPYEIFVRELVAMDGVDSSEIVLIDSNGCPTDHFIMGPLYK 240
                VGDPL  R E  D  N   +IF   +VA D      I LID  GCP D F+   L K
Sbjct:  1161 TIAVGDPLTFRLEAQDGYNHVTDIFATNVVARDPYSGRSIQLIDRFGCPVDPFVFPELDK 1220

Query:   241 AAD 243
               D
Sbjct:  1221 LRD 1223

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0031012 "extracellular matrix" evidence=IDA

GO:0050954 "sensory perception of mechanical stimulus" evidence=NAS;IMP

GO:0048813 "dendrite morphogenesis" evidence=IMP

GO:0005576 "extracellular region" evidence=NAS

WB|WBGene00022816 fbn-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 53/209 (25%), Positives = 93/209 (44%)

Query:    44 VSIDCRSGDMVARIKTNKL-FDGKIYAKGSPNS--CVQDIKGSLDFELEMAFDDV--ECN 98
             +S+ C +  M   +      F+GKI+ KG   +  C +     L+      F  V   C+
Sbjct:  2340 LSVYCEADGMTLVLGNETADFEGKIFVKGQAENPYCSKSFSSLLNSRKPYVFKVVFQHCD 2399

Query:    99 VKHQGLGRYMNDVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTE 158
             V+        + VV+Q H   +T+      + CQY + ++ V + V++       S LTE
Sbjct:  2400 VQLLDNHTMASTVVVQKHAMFLTNKADSYDLRCQYPIGSRAVESHVNVSELATT-STLTE 2458

Query:   159 EVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGVDSS 218
             +    +P   + +++   + +  SA VGD L L  E+  P+  + I  R   A++ ++S 
Sbjct:  2459 KNSTLAPICRLSVSNDQHSSIS-SAMVGDTLKLALEVT-PSENFGILPRNCFAIN-IESG 2515

Query:   219 E-IVLIDSNGCPTDHFIMGPLYKAADTGK 246
             E   L D  GC  D  +  P + AA + K
Sbjct:  2516 ERYTLTDDMGCAIDESLF-PQWSAATSSK 2543

GO:0005509 "calcium ion binding" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002119 "nematode larval development" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

WB|WBGene00013180 cutl-10 [Caenorhabditis elegans (taxid:6239)]

 Score = 141 (54.7 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 49/203 (24%), Positives = 86/203 (42%)

Query:    46 IDCRSGDMVARIKTNKLFDGKIYAKG--SPNSCVQDIKGSLDFELEMAFDDVECNVKHQG 103
             +DC    +    KT + F G+I+ KG     +CV+D   S   ++    ++  CN++ Q 
Sbjct:    33 VDCMEDRVKLSFKTQRPFHGRIFVKGMVDKQACVRDFVTSQAKDVTFELENGACNMRRQR 92

Query:   104 L------GRYMN-DVVIQHHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSAL 156
             +      G  M+  V+I  H T IT  D     TC Y   +K V+N+ D+ +        
Sbjct:    93 MLGPEKRGMEMSMTVIISFHSTFITKVDRAYRCTCFYMEADKVVTNKFDVSMLPTTDLID 152

Query:   157 TEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEILDPNSP-YEIFVRELVAMDGV 215
             T  + + + +V     D     +   A+VG+ +   + + +  S  + + V      DG 
Sbjct:   153 TARMPLCTYSVRR---DSITGPIVEFAKVGETV---YHVWNCESDMFSMLVHSCFVDDGN 206

Query:   216 DSSEIVLIDSNGCPTDHFIMGPL 238
                   L+D +GC  D  I+  L
Sbjct:   207 GDERKPLLDEHGCAIDPLILPDL 229

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	246
pfam00100	252	pfam00100, Zona_pellucida, Zona pellucida-like dom	7e-17
smart00241	252	smart00241, ZP, Zona pellucida (ZP) domain	6e-16

>gnl|CDD|215716 pfam00100, Zona_pellucida, Zona pellucida-like domain

 Score = 76.8 bits (189), Expect = 7e-17
 Identities = 49/210 (23%), Positives = 69/210 (32%), Gaps = 23/210 (10%)

Query: 48  CRSGDMVARIKTNKLFDGKIYAKG---SPNSCVQDIKGSLDFELEMAFDDVECNVKHQGL 104
           C    M   +  +  F   +Y         SC      S             C    Q  
Sbjct: 2   CTEDTMTVVVSKDLTFTPGLYLSSLHLGDPSCRPVETNSTHAIFRFPLSS--CGTTRQRT 59

Query: 105 G---RYMNDVVIQ----HHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALT 157
           G    Y N++V Q        I   SD  L V+C Y   + +VS+     V   V     
Sbjct: 60  GDGIVYENEIVSQPSVSVGPPITRDSDRRLPVSCSYTSRSVSVSSVA---VLPTVPPVSP 116

Query: 158 EEVVVDSPNVAMKI-TDRSGADVKP-SAEVGDPLALRFEILDPNS--PYEIFVRELVAMD 213
                 S   ++++ TD S     P + E+GDPL +   +       P  +F+    A  
Sbjct: 117 SPSGEGSLTFSLRLYTDDSYTSDYPVTIELGDPLYVEATVSVLPRSDPLVLFLDSCWATP 176

Query: 214 GVD---SSEIVLIDSNGCPTDHFIMGPLYK 240
           G D   S    LI+ NGCP D      L  
Sbjct: 177 GPDPDSSPRYDLIE-NGCPVDGDSTSTLSH 205

Length = 252

>gnl|CDD|214579 smart00241, ZP, Zona pellucida (ZP) domain

 Score = 74.3 bits (183), Expect = 6e-16
 Identities = 46/208 (22%), Positives = 66/208 (31%), Gaps = 30/208 (14%)

Query: 48  CRSGDMVARIKTNKLFDGKIYAKG---SPNSCVQDIKGSLDFELEMAFDDVECNVKHQGL 104
           C    MV  + T+ LF G I  KG      SC      +    +        C  + Q  
Sbjct: 2   CGEDQMVVSVSTDLLFPGGINVKGLTLGDPSCRPQFTDATSAFVSFEVPLNGCGTRRQVN 61

Query: 105 GR---YMNDVVIQ-HHDTIITSSD-LGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEE 159
                Y N +V+   H   IT  D       C Y    K   N        DV +    E
Sbjct: 62  PDGIVYSNTLVVSPFHPGFITRDDRAAYHFQCFYPENEKVSLN-------LDVSTIPPTE 114

Query: 160 VVVDS---PNVAMKITDRSGADVKP-----SAEVGDPLALRFEILDPNSP-YEIFVRELV 210
           +   S      + ++                  +GDP+   +E    + P   + V    
Sbjct: 115 LSSVSEGPLTCSYRL--YKDDSFGSPYQSADYVLGDPVYHEWECDGADDPPLGLLVDNCY 172

Query: 211 AMDGVDSSEIV---LIDSNGCPTDHFIM 235
           A  G D S      +ID NGCP D ++ 
Sbjct: 173 ATPGPDPSSGPKYFIID-NGCPVDGYLD 199

ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan). Length = 252

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	246
smart00241	253	ZP Zona pellucida (ZP) domain. ZP proteins are res	99.95
PF00100	265	Zona_pellucida: Zona pellucida-like domain; InterP	99.85

>smart00241 ZP Zona pellucida (ZP) domain

Probab=99.95  E-value=4.5e-27  Score=205.73  Aligned_cols=189  Identities=26%  Similarity=0.466  Sum_probs=148.7

Q ss_pred             EEcCCcEEEEEEcCCCceeEEEEcCCC--C-Cceee--ccCCeEEEEEeecCCCcccceec--Cce-EEEEEEEEE-ecC
Q psy16319         47 DCRSGDMVARIKTNKLFDGKIYAKGSP--N-SCVQD--IKGSLDFELEMAFDDVECNVKHQ--GLG-RYMNDVVIQ-HHD  117 (246)
Q Consensus        47 ~C~~~~i~v~v~t~~pF~G~Iyvkg~~--~-~C~~~--~~~s~~~~i~i~~~~~~CG~~~~--~~~-~~s~~vvVq-~hp  117 (246)
                      +|.+++|.|.|++..+|.|+||+++.+  + .|+..  ..++..+.+.+++.  +||+++.  +.+ .|+|+|+++ +|+
T Consensus         1 ~C~~~~m~v~v~~~~~~~g~i~~~~l~l~d~~C~~~~~~~~~~~~~f~~~l~--~CGt~~~~~~~~~~ysn~v~~~~~~~   78 (253)
T smart00241        1 QCGEDQMVVSVSTDLLFPGGIYVKGLYLGDPSCRPVFTDSTSAFVSFEVPLN--GCGTRRQVNPDGIVYSNTLVVSPFHP   78 (253)
T ss_pred             CCCCCEEEEEEEecCCCCCeEEEeeEEeCCCCCCCccccCCCcEEEEEeccc--cCCCeEEECCCeEEEEEEEEEccCCC
Confidence            599999999999999999999999975  2 99985  56677888888876  9999763  333 599999999 799


Q ss_pred             ceeeecce-EEEEEeEecCCCceEEeeEEecccCCccccceeeeeecCCceEEEEEcCC--CCCcccee---eeCCeEEE
Q psy16319        118 TIITSSDL-GLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRS--GADVKPSA---EVGDPLAL  191 (246)
Q Consensus       118 ~~~T~~Dr-~~~V~C~y~~~~~~v~~~~~v~~~~~~~~~l~~~~~~~~P~c~m~I~~~~--g~~~~~~~---~vGd~l~~  191 (246)
                      .++|..|+ .|+++|.|....+.. ..+.+...  ..+.+.. .....|.|+|+|+.++  ++ +...+   +|||+|+|
T Consensus        79 ~~itr~~~~~~~~~C~y~~~~~~~-~~~~~~~~--~~~~~~~-~~~g~~~~~m~l~~~~~~~~-~~~~~~~~~lg~~l~~  153 (253)
T smart00241       79 GFITRDDRAAYHFQCFYPENEKVS-LNLDVSTI--PPTELSS-VSEGPPTCSYRLYKDDSFGS-PYQSADYPVLGDPVYH  153 (253)
T ss_pred             CceEecCceEEEEEEEEeCCCceE-EEEEecCC--CCCCccc-ccCCCcEEEEEeccCCCCCC-cccCCCCcccCCeEEE
Confidence            99999999 999999999876533 33333211  1111111 1134689999999753  44 23333   79999999


Q ss_pred             EEEEeCC-CCCccEEEeEEEEEcCCC---CceEEEEcCCCCCCCccccCCcEEcCC
Q psy16319        192 RFEILDP-NSPYEIFVRELVAMDGVD---SSEIVLIDSNGCPTDHFIMGPLYKAAD  243 (246)
Q Consensus       192 ~~~~~~~-~~~~~~~V~~C~A~d~~~---~~~~~LID~~GC~~d~~i~~~~~y~~~  243 (246)
                      +|++.+. ++.++++|++|||.++.+   ..++.||| +|||+|+.+++.+.|..+
T Consensus       154 ~~~~~~~~~~~~~l~v~~C~at~~~~~~~~~~~~lI~-~GC~~d~~~~~~~~~~~~  208 (253)
T smart00241      154 EWSCDGADDPPLGLLVDNCYATPGSDPSSGPKYFIID-NGCPVDGYLDSTIPYNSS  208 (253)
T ss_pred             EEEEccCCCCCeEEEEeeEEEcCCCCCCCCCcEEEEE-CccCCCCccccceecCCC
Confidence            9999865 689999999999998753   47999999 899999999999999876

ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).

>PF00100 Zona_pellucida: Zona pellucida-like domain; InterPro: IPR001507 A large domain, containing around 260 amino acids, has been recognised in a variety of receptor-like eukaryotic glycoproteins []

Probab=99.85  E-value=2.4e-20  Score=161.71  Aligned_cols=192  Identities=24%  Similarity=0.377  Sum_probs=121.8

Q ss_pred             EEcCCcEEEEEEcCCCceeEEEEcC-CC--CCcee-eccCCeEEEEEeecCCCcccceec---Cc-eEEEEEEEEEec--
Q psy16319         47 DCRSGDMVARIKTNKLFDGKIYAKG-SP--NSCVQ-DIKGSLDFELEMAFDDVECNVKHQ---GL-GRYMNDVVIQHH--  116 (246)
Q Consensus        47 ~C~~~~i~v~v~t~~pF~G~Iyvkg-~~--~~C~~-~~~~s~~~~i~i~~~~~~CG~~~~---~~-~~~s~~vvVq~h--  116 (246)
                      +|.++.|.|.|++..+|.|.||+.. +.  ..|+. ...+...+.+.+++....||+.+.   +. ..|+++|+++.+  
T Consensus         1 ~C~~~~~~v~i~~~~~~~~~i~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Cg~~~~~~~~~~~~y~n~i~~~~~~~   80 (265)
T PF00100_consen    1 TCGSDSMTVTIKKDYLFTGNIYVSDLHLNDPSCRARSDTNSTHITFSIPFNSPSCGTTRSIENGDSIVYSNTIVSSQDVS   80 (265)
T ss_dssp             EE-SSEEEEEEESSTTSSS-B-GGGEEETTTTB--EEECTTTEEEEEEECCC--CTSEEEE--SSEEEEEEEEEEE--SS
T ss_pred             CcCCCEEEEEEEeccccCCCEEeeeeEECCCCCCCcccCCCcEEEEEEecCCCCCcccccccccCcceeeeeeeeecccc
Confidence            6999999999999999999999854 43  38999 666667778888877223999742   22 358999999764  


Q ss_pred             ------CceeeecceEEEEEeEecCCCceEEeeEEecccCCccccceeeeeecCCceEEEEEcCC---C--CCccceeee
Q psy16319        117 ------DTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVVVDSPNVAMKITDRS---G--ADVKPSAEV  185 (246)
Q Consensus       117 ------p~~~T~~Dr~~~V~C~y~~~~~~v~~~~~v~~~~~~~~~l~~~~~~~~P~c~m~I~~~~---g--~~~~~~~~v  185 (246)
                            +.+++..|+.|+++|.|......+.... ....  ..+............++|++...+   .  ......+.+
T Consensus        81 ~~~~~~~~i~~~~~~~~~~~C~y~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~m~l~~~~~~~~~~~~~~~~~~v  157 (265)
T PF00100_consen   81 FNDSPGGNITRDSDRRFNFTCTYSSSQYSVSSGS-PNIS--SVTIHISQESSGSFSFSMRLYKDDSFSSPYSQPPATVEV  157 (265)
T ss_dssp             SS---STTECSSS-EEEEEEEEE-EC---------------B-TTT---STT--EEEEEEEESTTTSSCB---SSEEE-T
T ss_pred             ccccccCceEEecccccccEEEECCccceecccc-ccce--eccccceeccCCccceEEEeccCccccccccCCceeEEe
Confidence                  4677789999999999943332332110 0000  000000000112235778887642   1  123467899


Q ss_pred             CCeEEEEEEEeCCC-CCccEEEeEEEEEcC---CCCceEEEEcCCCCCCCccccCCcEEc
Q psy16319        186 GDPLALRFEILDPN-SPYEIFVRELVAMDG---VDSSEIVLIDSNGCPTDHFIMGPLYKA  241 (246)
Q Consensus       186 Gd~l~~~~~~~~~~-~~~~~~V~~C~A~d~---~~~~~~~LID~~GC~~d~~i~~~~~y~  241 (246)
                      ||+|+++|++.... ..+.++|++|||.++   .+..++.|||++|||+|...++.+.+.
T Consensus       158 g~~v~~~v~~~~~~~~~~~~~v~~C~a~~~~~~~~~~~~~lId~~GC~~~~~~~~~~~~~  217 (265)
T PF00100_consen  158 GDRVYVEVSVSPDSSDPLGLFVDSCWATPSSDPDSSPSYTLIDENGCPVDSDDFVTFEYS  217 (265)
T ss_dssp             T-EEEEEEEEEECCC-TEEEEEEEEEEESSSSTTSSSCEEEEBCTTEEGGGCTTTEEEEE
T ss_pred             eeeEEEEEEeccccceeeEEEeCEEEEeCCCCcccccccceeccccccccccceeEEEec
Confidence            99999999986543 227799999999998   556899999999999999999999887

All of these proteins are mosaic proteins composed of various domains and that all have a large extracellular region followed by either a transmembrane region and a very short cytoplasmic region or by a GPI-anchor. The domain common to all these proteins is located in the C-terminal portion of the extracellular region, and contains 8 conserved Cys residues, which are probably involved in disulphide bond formation. This entry includes a domain found in the zona pellucida proteins. The zona pellucida is a specialised extracellular matrix of mammailian eggs, which plays a crucial role in fertilisation by directly mediating species-restricted recongition between gametes. In mammals, up to four zona pellucida subnits are known, named ZP1-4. The full-length crystal structure of murine ZP3 has been solved []. This entry is also found in other glycoproteins, such as CD105 (also called endoglin) which is the regulatory component of the TGF-beta receptor complex. It is a modulator of cellular responses to TGF-beta 1. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; PDB: 3D4G_G 3EF7_A 3D4C_A 3NK4_B 3NK3_B 3QW9_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	246
3nk4_A	297	ZONA pellucida 3; fertilization, oocyte, egg coat,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A* Length = 297

 Score = 61.9 bits (149), Expect = 1e-11
 Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 44  VSIDCRSGDMVARIKTNKLFDGKIYAKGS----PNSCVQDIKGSLDFELEMAFDDVECNV 99
           V++ C+   +V  +  +    G++         P +C      +    +  A    EC  
Sbjct: 4   VAVQCQEAQLVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGS 63

Query: 100 KHQGLGR---YMNDVVIQ----HHDTIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDV 152
             Q       Y   +        +  II ++   + + C Y    +  SN +        
Sbjct: 64  VVQVTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHYPRREQVSSNAIR--PTWSP 121

Query: 153 KSALTEEVVVDSPNVAMKITDRSGADVKPSAEVGDPLALRFEI-LDPNSPYEIFVRELVA 211
            ++          ++ +   D S        ++GD L ++ E+  + + P  +FV   VA
Sbjct: 122 FNSALSAEERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVA 181

Query: 212 ---MDGVDSSEIVLIDSNGCPTDHFIMGP 237
               DG  S    +ID NGC  D  +   
Sbjct: 182 ALSPDGDSSPHYAIIDFNGCLVDGRVDDT 210

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 1e-05
 Identities = 42/276 (15%), Positives = 80/276 (28%), Gaps = 94/276 (34%)

Query: 24  QDPYLDVAEAQTYELSACYNVSIDCRSGDM-----------VAR-IKTNKLFDGKIY--- 68
             PYL + +A   EL    NV ID   G +           V    K     D KI+   
Sbjct: 134 LQPYLKLRQA-LLELRPAKNVLID---G-VLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188

Query: 69  --AKGSPNSCVQDIKGSLDFELEMAFD---DVECNVKH------QGLGRYM--------- 108
                SP + ++ ++  L ++++  +    D   N+K         L R +         
Sbjct: 189 LKNCNSPETVLEMLQ-KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 109 ---NDV----VIQHHD----TIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALT 157
               +V         +     ++T+    +      D  +   +  + L         LT
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLTTRFKQVT-----DFLSAATTTHISLD---HHSMTLT 299

Query: 158 EEVVVDSPNVAMKITDRSGADVKPSAEVGDPLAL------------RF------------ 193
            +   +  ++ +K  D    D+       +P  L             +            
Sbjct: 300 PD---EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 194 -------EILDPNSPYEIFVRELVAMDGVDSSEIVL 222
                   +L+P    ++F R  V         I+L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 42/281 (14%), Positives = 89/281 (31%), Gaps = 70/281 (24%)

Query: 1   MTLMRDQMQYSTLFDLASSCSSLQDPY---LDVAEAQTYELSACYNVSID--CRSGDMVA 55
           M     + QY    D+ S     +D +    D  + Q    S      ID    S D V+
Sbjct: 7   MDFETGEHQYQYK-DILSV---FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62

Query: 56  RIKTNKLFDGKIYAKGSPNSCVQD-IKGSL--DFELEMAFDDVECNVKHQGLGRYMNDVV 112
              T +LF   + +K      VQ  ++  L  +++  M+    E          Y     
Sbjct: 63  G--TLRLFW-TLLSK--QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY----- 112

Query: 113 IQHHDTIITSSDL--GLAVT---CQYDLTN--KTVSNEVDLGVQGDV---KSALTEEVV- 161
           I+  D +   + +     V+       L      +    ++ + G +   K+ +  +V  
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172

Query: 162 -------------------VDSPNVAMKITDRSGADVKPS----AEVGDPLALRFEILDP 198
                               +SP   +++  +    + P+    ++    + LR   +  
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 199 -------NSPYEIFVRELVAMDGVDSSEIVLIDS--NGCPT 230
                  + PYE     L+ +  V +++    ++    C  
Sbjct: 233 ELRRLLKSKPYE---NCLLVLLNVQNAKA--WNAFNLSCKI 268

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	246
3nk4_A	297	ZONA pellucida 3; fertilization, oocyte, egg coat,	99.48
3qw9_A	176	Transforming growth factor beta receptor type 3; c	97.47

>3nk4_A ZONA pellucida 3; fertilization, oocyte, egg coat, vitelline E ZP domain, ZP module, egg-sperm interaction, species-specif recognition, speciation; HET: A2G FLC; 2.00A {Gallus gallus} PDB: 3nk3_A*

Probab=99.48  E-value=3.3e-12  Score=113.56  Aligned_cols=183  Identities=16%  Similarity=0.272  Sum_probs=118.5

Q ss_pred             EEEEEcCCcEEEEEEcCCCcee------EEEEcCCCCCceeeccC--CeEEEEEeecCCCccccee--cCc-eEEEEEEE
Q psy16319         44 VSIDCRSGDMVARIKTNKLFDG------KIYAKGSPNSCVQDIKG--SLDFELEMAFDDVECNVKH--QGL-GRYMNDVV  112 (246)
Q Consensus        44 v~v~C~~~~i~v~v~t~~pF~G------~Iyvkg~~~~C~~~~~~--s~~~~i~i~~~~~~CG~~~--~~~-~~~s~~vv  112 (246)
                      |.|+|..+.|.|.|.-.---.|      .++..+  ..|+....+  ...+.+.+|+.  .||+..  .+. ..|+|.|+
T Consensus         4 V~V~C~~~~m~V~V~k~~l~~~~~i~~~~L~L~d--~~C~~~~~~~~~~~~~f~~~l~--~CGT~~~~~~~~iiY~N~l~   79 (297)
T 3nk4_A            4 VAVQCQEAQLVVTVHRDLFGTGRLINAADLTLGP--AACKHSSLNAAHNTVTFAAGLH--ECGSVVQVTPDTLIYRTLIN   79 (297)
T ss_dssp             EEEEECSSEEEEEEESCCSCSSCCCCGGGEEETT--TTBCCSEEETTTTEEEEEEETT--CTTCEEEECSSEEEEEEEEE
T ss_pred             EEEEeCCCEEEEEEEHHHhCCCCccccceeEECC--CCCCCeeeCCCCcEEEEEecCC--CCCceeEecCCEEEEEEEEE
Confidence            6899999999999987432222      244432  389987653  46777777876  999975  333 35899999


Q ss_pred             EEecC----ceeeecceEEEEEeEecCCCceEEeeEEecccCCccccceeeee-ecCCceEEEEEcCCC--CCccceeee
Q psy16319        113 IQHHD----TIITSSDLGLAVTCQYDLTNKTVSNEVDLGVQGDVKSALTEEVV-VDSPNVAMKITDRSG--ADVKPSAEV  185 (246)
Q Consensus       113 Vq~hp----~~~T~~Dr~~~V~C~y~~~~~~v~~~~~v~~~~~~~~~l~~~~~-~~~P~c~m~I~~~~g--~~~~~~~~v  185 (246)
                      ....|    .|.....-.+.++|.|.... .++... +..  ...+ +..... ...-..+|++...+.  +.....+.+
T Consensus        80 ~~~~~~~~~~ItR~~~~~l~~~C~Y~~~~-~vs~~~-~~p--~~~~-~~~~~~~~g~~~~~m~l~~d~~~~~~~~~~~~l  154 (297)
T 3nk4_A           80 YDPSPASNPVIIRTNPAVIPIECHYPRRE-QVSSNA-IRP--TWSP-FNSALSAEERLVFSLRLMSDDWSTERPFTGFQL  154 (297)
T ss_dssp             ECCCCCSSTTEESSCCEEEEEEEEEEC------------C--CBCT-TC------CCCCEEEEEECTTSSSBCCSCCBCT
T ss_pred             EeccCCCCCceEecccEEEEEEEEEcCCC-cccccc-CcC--cccc-cccccccccceEEEEEeccCCCcccccCCcccC
Confidence            87543    36666788899999998764 222110 110  0001 110000 112367899886532  111234689


Q ss_pred             CCeEEEEEEEeCC-CCCccEEEeEEEEEcC---CCCceEEEEcCCCCCCCcccc
Q psy16319        186 GDPLALRFEILDP-NSPYEIFVRELVAMDG---VDSSEIVLIDSNGCPTDHFIM  235 (246)
Q Consensus       186 Gd~l~~~~~~~~~-~~~~~~~V~~C~A~d~---~~~~~~~LID~~GC~~d~~i~  235 (246)
                      ||+|++++++... ...+.++|++|||...   .+..++.|||.+|||.|..+.
T Consensus       155 ~~~lyvev~v~~~~~~~l~l~l~~C~ATps~~~~~~~~y~lI~~~GC~~d~~~~  208 (297)
T 3nk4_A          155 GDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVD  208 (297)
T ss_dssp             TCEEEEEEEECCTTBCCEEEEEEEEEEESSSCTTSSSEEEEEBTTTEEGGGGST
T ss_pred             CCEEEEEEEEecCCCCCEEEEEeeEEEeCCCCccCCceEEEEccCCCCcCCccc
Confidence            9999999999754 3689999999999864   334789999889999998765

>3qw9_A Transforming growth factor beta receptor type 3; cytokine receptor, immunoglobulin domain, ZONA pellucida, TG ligand CO-receptor; HET: NAG BMA FUC MAN; 2.00A {Rattus norvegicus}

Probab=97.47  E-value=0.00023  Score=58.31  Aligned_cols=54  Identities=13%  Similarity=0.201  Sum_probs=43.9

Q ss_pred             ceeeeCCeEEEEEEEeCCCCCccEEEeEEEEEcCC---CCceEEEEcCCCCCCCcccc
Q psy16319        181 PSAEVGDPLALRFEILDPNSPYEIFVRELVAMDGV---DSSEIVLIDSNGCPTDHFIM  235 (246)
Q Consensus       181 ~~~~vGd~l~~~~~~~~~~~~~~~~V~~C~A~d~~---~~~~~~LID~~GC~~d~~i~  235 (246)
                      ..+.+||+|++++++...+..+.+++.+|||....   ...++.||+ +|||.|..+-
T Consensus        25 ~~v~l~~~lyvev~l~~~d~~l~l~ld~CwATps~d~~~~~~y~lI~-nGC~~D~t~~   81 (176)
T 3qw9_A           25 FSVAENEHVYVEVSVTKADQDLGFAIQTCFLSPYSNPDRMSDYTIIE-NICPKDDSVK   81 (176)
T ss_dssp             EEECTTCEEEEEEEEEESCTTEEEEEEEEEEESCSCTTSCCSCEEEE-TTEECSTTCE
T ss_pred             ceEecCCEEEEEEEeccCCCceEEEEeeEEeecCCCccCCccEEEEE-CCccCCCCEE
Confidence            36789999999999876667799999999997642   346789995 7999997653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00