Psyllid ID: psy16481

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINHL
Secondary Structure (PSIPRED)
ccccccEEEEEEcccccccccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHccccccEEEcEEEccccEEEEEccEEEcccHHHHHHcHHHHHHHHHHHHHHHcccccccccccEEEEcccccccccccccHHHHHHHHHHHHHHcccccccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEccccccccHccccHHHHHHHHHHHHccEEEEEEccccHHHHHHHHccccHHHHccEEEcccccEEEcccccccHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHccccccEEEEccEEEccccccccc
Coil and Loop (DISEMBL)
mtcranticlfdvdgtltqprqKAQNETLDFLLKklkplshlaivsgSDMNKVAEqlggekvleqfdfvfpenglvaykngklfekKSIIDHMGEDKIQTFINYCLQHLstvtlpfkrgnfiEFRTGLINSIIDHMGEDKIQTFINYCLQHLstvtlpfkrgnfiEFRTGLINHL
Flexible Loop (DISEMBL)
mtcranticlfdvdgtltqprqKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLStvtlpfkrgnFIEFRTGLINHL
Low Complexity Region (SEG)
MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINHL
Disordered region (IsUnstruct)
****ANTICLFDVDGTLTQ******NETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLI***
Disordered Region (DISOPRED)
****ANT*CLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINH*
Disordered Region (DISEMBL)
MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINHL
Disordered Region (DISPRO)
****ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN*L
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q9Z2M7	242	Phosphomannomutase 2 OS=M	yes	N/A	0.697	0.504	0.564	1e-34
Q60HD6	246	Phosphomannomutase 2 OS=M	N/A	N/A	0.731	0.520	0.561	2e-34
O15305	246	Phosphomannomutase 2 OS=H	yes	N/A	0.731	0.520	0.546	4e-34
Q3SZJ9	246	Phosphomannomutase 2 OS=B	yes	N/A	0.731	0.520	0.523	6e-33
O35621	262	Phosphomannomutase 1 OS=M	no	N/A	0.92	0.614	0.412	1e-31
Q92871	262	Phosphomannomutase 1 OS=H	no	N/A	0.92	0.614	0.417	1e-31
Q9VTZ6	254	Probable phosphomannomuta	yes	N/A	0.845	0.582	0.446	1e-31
Q86B09	249	Phosphomannomutase 2 OS=D	yes	N/A	0.851	0.598	0.437	9e-30
Q1W374	249	Phosphomannomutase OS=Tri	N/A	N/A	0.708	0.497	0.468	1e-28
Q54X03	249	Phosphomannomutase 1 OS=D	no	N/A	0.851	0.598	0.431	1e-28

>sp|Q9Z2M7|PMM2_MOUSE Phosphomannomutase 2 OS=Mus musculus GN=Pmm2 PE=2 SV=1

 Score =  145 bits (367), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 94/124 (75%), Gaps = 2/124 (1%)

Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
           T+CLFD+DGTLT PRQK   E +D  L+KL+  + + +V GSD  K+ EQLG + V+E++
Sbjct: 3   TLCLFDMDGTLTAPRQKI-TEEMDGFLQKLRQKTKIGVVGGSDFEKLQEQLGND-VVEKY 60

Query: 67  DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
           D+VFPENGLVAYK+GKL  K++I  H+GED IQ  INYCL +++ + LP KRG FIEFR 
Sbjct: 61  DYVFPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRN 120

Query: 127 GLIN 130
           G++N
Sbjct: 121 GMLN 124

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.
Mus musculus (taxid: 10090)
EC: 5EC: .EC: 4EC: .EC: 2EC: .EC: 8

>sp|Q60HD6|PMM2_MACFA Phosphomannomutase 2 OS=Macaca fascicularis GN=PMM2 PE=2 SV=1

 Score =  145 bits (365), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 2/130 (1%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M      +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD  KV EQLG +
Sbjct: 1   MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND 59

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
            V+E++D+VFPENGLVAYK+GKL  K++I  H+GE  IQ  INYCL +++ V LP KRG 
Sbjct: 60  -VVEKYDYVFPENGLVAYKDGKLLCKQNIQSHLGEALIQDLINYCLSYIAKVKLPKKRGT 118

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Macaca fascicularis (taxid: 9541)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|O15305|PMM2_HUMAN Phosphomannomutase 2 OS=Homo sapiens GN=PMM2 PE=1 SV=1

 Score =  144 bits (362), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 2/130 (1%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M      +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD  KV EQLG +
Sbjct: 1   MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND 59

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
            V+E++D+VFPENGLVAYK+GKL  +++I  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct: 60  -VVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGT 118

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q3SZJ9|PMM2_BOVIN Phosphomannomutase 2 OS=Bos taurus GN=PMM2 PE=2 SV=1

 Score =  140 bits (352), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 68/130 (52%), Positives = 92/130 (70%), Gaps = 2/130 (1%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M      +CLFDVDGTLT PRQK   + +D  L+KL+    + +V GSD  KV EQLG +
Sbjct: 1   MAAPGPALCLFDVDGTLTAPRQKITKD-MDCFLQKLRQKIKIGVVGGSDFEKVQEQLG-D 58

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
            V++++D+VFPENGLVAY++GKL  K++I  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct: 59  DVIKKYDYVFPENGLVAYRDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGT 118

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Bos taurus (taxid: 9913)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|O35621|PMM1_MOUSE Phosphomannomutase 1 OS=Mus musculus GN=Pmm1 PE=1 SV=1

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 110/182 (60%), Gaps = 21/182 (11%)

Query: 4   RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
           +   +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD +K+AEQLG G++V
Sbjct: 11  KERILCLFDVDGTLTPARQKIDPEVSAFL-QKLRSRVQIGVVGGSDYSKIAEQLGEGDEV 69

Query: 63  LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
           +E+FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FI
Sbjct: 70  IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 129

Query: 123 EFRTGLINSIIDHMG-----EDKI------------QTFINYCLQHLSTVTLPFKRGNFI 165
           EFR G++N  +  +G     E++I            + F+       +   L F RG  I
Sbjct: 130 EFRNGMLN--VSPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 187

Query: 166 EF 167
            F
Sbjct: 188 SF 189

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. In addition, may be responsible for the degradation of glucose-1,6-bisphosphate in ischemic brain.

Mus musculus (taxid: 10090)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q92871|PMM1_HUMAN Phosphomannomutase 1 OS=Homo sapiens GN=PMM1 PE=1 SV=2

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 109/182 (59%), Gaps = 21/182 (11%)

Query: 4   RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
           +   +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD  K+AEQLG G++V
Sbjct: 11  KERVLCLFDVDGTLTPARQKIDPEVAAFL-QKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69

Query: 63  LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
           +E+FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FI
Sbjct: 70  IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFI 129

Query: 123 EFRTGLINSIIDHMG-----EDKI------------QTFINYCLQHLSTVTLPFKRGNFI 165
           EFR G++N  I  +G     E++I            + F+       +   L F RG  I
Sbjct: 130 EFRNGMLN--ISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRFSRGGMI 187

Query: 166 EF 167
            F
Sbjct: 188 SF 189

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. In addition, may be responsible for the degradation of glucose-1,6-bisphosphate in ischemic brain.

Homo sapiens (taxid: 9606)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q9VTZ6|PMM_DROME Probable phosphomannomutase OS=Drosophila melanogaster GN=CG10688 PE=2 SV=1

 Score =  135 bits (341), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/150 (44%), Positives = 96/150 (64%), Gaps = 2/150 (1%)

Query: 4   RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
           R   + LFDVDGTLT PR     E  +F   ++KP + + IV GSD+ K+ EQL G K+L
Sbjct: 8   RDEILLLFDVDGTLTMPRSVVTPEFEEFFYSRVKPRATIGIVGGSDLEKMFEQLNGRKIL 67

Query: 64  EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
            +FDF+FPENGLV  + GK   K++II H+GE+ ++ FIN+ L++LS + +P KRG FIE
Sbjct: 68  NEFDFIFPENGLVQIEGGKEVGKQNIIMHLGEETVKRFINFVLRYLSELDVPIKRGTFIE 127

Query: 124 FRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
           FR G++N   I      ++   F  Y ++H
Sbjct: 128 FRNGMMNVCPIGRQCTREERNMFAEYDIEH 157

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Drosophila melanogaster (taxid: 7227)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q86B09|PMM2_DICDI Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2

 Score =  129 bits (324), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 98/153 (64%), Gaps = 4/153 (2%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M+   NTICLFDVD TLT+PR    NE  + LL  L+    + +V GS+ NK+ EQLG E
Sbjct: 1   MSQNKNTICLFDVDDTLTKPRNAITNEMKE-LLASLRTKIKIGVVGGSNFNKIKEQLG-E 58

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
             +  FD+VF ENGL+AYK+G L E + I  ++GE+ I+ FIN+ L +++ + +P KRG 
Sbjct: 59  NFINDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGT 118

Query: 121 FIEFRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
           F+EFR G++N   I  +  + + + F  Y L+H
Sbjct: 119 FVEFRNGMLNISPIGRNCSQQEREEFEKYDLEH 151

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q1W374|PMM_WHEAT Phosphomannomutase OS=Triticum aestivum PE=2 SV=1

 Score =  125 bits (315), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 93/126 (73%), Gaps = 2/126 (1%)

Query: 5   ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLE 64
           A  + LFDVDGTLT PR++   E L+F+ K+L+    + +V GSD+ K++EQLG + V+ 
Sbjct: 8   AGVLALFDVDGTLTAPRKEVTPEMLEFM-KRLRENVTVGVVGGSDLVKISEQLG-KSVIT 65

Query: 65  QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
            +D+VF ENGLVA+K+GKL   +S+  ++G+D+++ FIN+ L +++ + +P KRG FIEF
Sbjct: 66  DYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEF 125

Query: 125 RTGLIN 130
           R+G+IN
Sbjct: 126 RSGMIN 131

Involved in ascorbic acid biosynthesis and in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Triticum aestivum (taxid: 4565)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

>sp|Q54X03|PMM1_DICDI Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/153 (43%), Positives = 97/153 (63%), Gaps = 4/153 (2%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M+   NTICLFDVDGTLT+PR     E  DFL   L+    L +V GSD+NK+ EQLG E
Sbjct: 1   MSLVPNTICLFDVDGTLTKPRNVITPEMKDFL-AGLRTKVELGVVGGSDINKIKEQLG-E 58

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
             + +F ++F ENGL+++K+G L   + I   +GE+ I+ FIN+ L +++ + +P KRG 
Sbjct: 59  NCINEFHYLFAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGT 118

Query: 121 FIEFRTGLIN--SIIDHMGEDKIQTFINYCLQH 151
           F+EFR G+IN   I  +  + + + F  Y L+H
Sbjct: 119 FVEFRNGMINISPIGRNCSQQEREEFEKYDLEH 151

Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.

Dictyostelium discoideum (taxid: 44689)

EC: 5

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
321459567	252	hypothetical protein DAPPUDRAFT_299547 [	0.725	0.503	0.582	3e-37
328723496	264	PREDICTED: phosphomannomutase-like isofo	0.742	0.492	0.538	8e-37
328723494	247	PREDICTED: phosphomannomutase-like isofo	0.714	0.506	0.552	2e-35
239789563	247	ACYPI005456 [Acyrthosiphon pisum]	0.714	0.506	0.552	2e-35
260808775	250	hypothetical protein BRAFLDRAFT_113552 [	0.708	0.496	0.584	2e-35
189240338	248	PREDICTED: similar to phosphomannomutase	0.702	0.495	0.593	3e-35
395515139	246	PREDICTED: phosphomannomutase 2 [Sarcoph	0.731	0.520	0.561	2e-33
291390567	245	PREDICTED: phosphomannomutase 2 [Oryctol	0.731	0.522	0.561	2e-33
195126393	250	GI12260 [Drosophila mojavensis] gi|19391	0.742	0.52	0.538	2e-33
71895479	247	phosphomannomutase 2 [Gallus gallus] gi|	0.697	0.493	0.556	3e-33

>gi|321459567|gb|EFX70619.1| hypothetical protein DAPPUDRAFT_299547 [Daphnia pulex]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 97/127 (76%)

Query: 4   RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL 63
           R   ICLFDVDGTLT PR K    T +FLL K+KP++ + +V GSD+ K+AEQ+GG  V+
Sbjct: 7   REEIICLFDVDGTLTMPRNKIIPTTEEFLLTKVKPVATIGLVGGSDLKKIAEQMGGADVI 66

Query: 64  EQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIE 123
           ++F++VF ENGLVAYKNG +  K SI +H+GE+K+Q FINY L ++S +TLP KRG FIE
Sbjct: 67  KKFEYVFAENGLVAYKNGHMIGKMSIQEHVGEEKLQKFINYALGYMSKLTLPVKRGTFIE 126

Query: 124 FRTGLIN 130
           FR GL+N
Sbjct: 127 FRDGLVN 133

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723496|ref|XP_001945623.2| PREDICTED: phosphomannomutase-like isoform 1 [Acyrthosiphon pisum]

 Score =  158 bits (399), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 100/130 (76%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           + C  +TICLFDVDGT+T PRQ        F++ +LK  + + +VSGSD++K+ EQLGG 
Sbjct: 16  LVCNRSTICLFDVDGTVTDPRQPIDPSVRSFMVDELKKKTLIGLVSGSDISKIEEQLGGP 75

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
           +   QFD+VF ENGLVA+KNG+  +K++I+D++GE+K+QTFIN+ L ++S + LP KRGN
Sbjct: 76  EYTAQFDYVFAENGLVAFKNGEELKKQTIVDYLGEEKLQTFINFALGYMSKIQLPVKRGN 135

Query: 121 FIEFRTGLIN 130
           F+EFRTG+IN
Sbjct: 136 FVEFRTGMIN 145

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328723494|ref|XP_003247856.1| PREDICTED: phosphomannomutase-like isoform 2 [Acyrthosiphon pisum]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 98/125 (78%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
           +TICLFDVDGT+T PRQ        F++ +LK  + + +VSGSD++K+ EQLGG +   Q
Sbjct: 4   STICLFDVDGTVTDPRQPIDPSVRSFMVDELKKKTLIGLVSGSDISKIEEQLGGPEYTAQ 63

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGLVA+KNG+  +K++I+D++GE+K+QTFIN+ L ++S + LP KRGNF+EFR
Sbjct: 64  FDYVFAENGLVAFKNGEELKKQTIVDYLGEEKLQTFINFALGYMSKIQLPVKRGNFVEFR 123

Query: 126 TGLIN 130
           TG+IN
Sbjct: 124 TGMIN 128

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239789563|dbj|BAH71397.1| ACYPI005456 [Acyrthosiphon pisum]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 98/125 (78%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
           +TICLFDVDGT+T PRQ        F++ +LK  + + +VSGSD++K+ EQLGG +   Q
Sbjct: 4   STICLFDVDGTVTDPRQPIDPSVRSFMVDELKKKTLIGLVSGSDISKIEEQLGGPEYTAQ 63

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGLVA+KNG+  +K++I+D++GE+K+QTFIN+ L ++S + LP KRGNF+EFR
Sbjct: 64  FDYVFAENGLVAFKNGEELKKQTIVDYLGEEKLQTFINFALGYMSKIQLPVKRGNFVEFR 123

Query: 126 TGLIN 130
           TG+IN
Sbjct: 124 TGMIN 128

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260808775|ref|XP_002599182.1| hypothetical protein BRAFLDRAFT_113552 [Branchiostoma floridae] gi|229284459|gb|EEN55194.1| hypothetical protein BRAFLDRAFT_113552 [Branchiostoma floridae]

 Score =  153 bits (387), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/125 (58%), Positives = 99/125 (79%), Gaps = 1/125 (0%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
           +T+CLFDVDGTLT  RQK  +   +F++K LK    + +V GSD+ K+AEQ+ GE V+++
Sbjct: 7   STLCLFDVDGTLTAARQKITSSMEEFMMK-LKEKVVVGLVGGSDLVKIAEQMKGEDVVKK 65

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGLVAYK+G L  K +I +HMGE+K+Q+FIN+CLQ++S +TLP KRG FIEFR
Sbjct: 66  FDYVFAENGLVAYKDGGLLAKMNIQEHMGEEKLQSFINFCLQYMSKLTLPVKRGTFIEFR 125

Query: 126 TGLIN 130
           +GLIN
Sbjct: 126 SGLIN 130

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|189240338|ref|XP_970612.2| PREDICTED: similar to phosphomannomutase [Tribolium castaneum]

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 92/123 (74%)

Query: 8   ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
           +CLFD+DGTLT+PRQ    E  +F+  K+KPL  L +V GSD  K+AEQ+ GE V+ +FD
Sbjct: 7   LCLFDMDGTLTKPRQAIDPEFDEFIQTKIKPLCTLGLVGGSDFKKIAEQMNGEDVIFRFD 66

Query: 68  FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
           +VFPENGLV YK GK   ++SI   MGEDK+Q FINY L +LSTV LP KRGNF+EFR G
Sbjct: 67  YVFPENGLVQYKFGKEVGRQSIQKFMGEDKLQMFINYVLSYLSTVVLPVKRGNFVEFRAG 126

Query: 128 LIN 130
           ++N
Sbjct: 127 MLN 129

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|395515139|ref|XP_003761764.1| PREDICTED: phosphomannomutase 2 [Sarcophilus harrisii]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 2/130 (1%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M   A  +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD +KV EQLG +
Sbjct: 1   MASPAPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFDKVQEQLG-D 58

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
            VLE++D+VFPENGLVAYK+GK   K++I  H+GE+ IQ  INYCL +++ + LP KRG 
Sbjct: 59  NVLEKYDYVFPENGLVAYKDGKFLCKQNIQGHLGEELIQDLINYCLSYIAKIKLPKKRGT 118

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291390567|ref|XP_002711791.1| PREDICTED: phosphomannomutase 2 [Oryctolagus cuniculus]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/130 (56%), Positives = 92/130 (70%), Gaps = 2/130 (1%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M      +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD  KV EQLG +
Sbjct: 1   MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGTD 59

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
            V+E++D+VFPENGLVAYK+GKL  K+SI  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct: 60  -VIEKYDYVFPENGLVAYKDGKLLSKQSIQGHLGEALIQDLINYCLSYIAKIKLPKKRGT 118

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 119 FIEFRNGMLN 128

Source: Oryctolagus cuniculus

Species: Oryctolagus cuniculus

Genus: Oryctolagus

Family: Leporidae

Order: Lagomorpha

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195126393|ref|XP_002007655.1| GI12260 [Drosophila mojavensis] gi|193919264|gb|EDW18131.1| GI12260 [Drosophila mojavensis]

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/130 (53%), Positives = 94/130 (72%)

Query: 1   MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
           M+ R + + LFDVDGTLT PR   Q E  +FL  K+KP + + IV GSD+ K+ EQL G+
Sbjct: 1   MSKREDILLLFDVDGTLTMPRSVVQPEFEEFLYTKVKPKATIGIVGGSDLEKMFEQLNGQ 60

Query: 61  KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
           K+L++FDF+FPENGLV  + GK   K++II H+GE  +Q FINY L++LS + LP KRG 
Sbjct: 61  KILKEFDFIFPENGLVQIEAGKEVGKQNIIQHLGEKTLQRFINYVLRYLSELELPIKRGT 120

Query: 121 FIEFRTGLIN 130
           FIEFR G++N
Sbjct: 121 FIEFRNGMMN 130

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|71895479|ref|NP_001026639.1| phosphomannomutase 2 [Gallus gallus] gi|53133828|emb|CAG32243.1| hypothetical protein RCJMB04_20k18 [Gallus gallus]

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/124 (55%), Positives = 92/124 (74%), Gaps = 2/124 (1%)

Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
            +CLFDVDGTLT PRQK   E  +FL ++L+    + +V GSD  K+ EQLG + V+E+F
Sbjct: 8   VLCLFDVDGTLTAPRQKITAEMAEFL-QRLRQKVKVGVVGGSDFEKIKEQLG-DDVVEKF 65

Query: 67  DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
           D+VFPENGLVAYK+GK F K++I  H+GED +Q  INYCL +++ + LP KRG FIEFR 
Sbjct: 66  DYVFPENGLVAYKDGKFFSKQNIQSHLGEDVLQDLINYCLSYIAKIKLPKKRGTFIEFRN 125

Query: 127 GLIN 130
           G++N
Sbjct: 126 GMLN 129

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
MGI|MGI:1859214	242	Pmm2 "phosphomannomutase 2" [M	0.697	0.504	0.564	3.6e-34
UNIPROTKB|F1N8Z6	251	PMM2 "Uncharacterized protein"	0.691	0.482	0.560	5.8e-34
RGD|1309366	242	Pmm2 "phosphomannomutase 2" [R	0.697	0.504	0.556	3.2e-33
UNIPROTKB|O15305	246	PMM2 "Phosphomannomutase 2" [H	0.731	0.520	0.546	4.1e-33
UNIPROTKB|E1C4B8	249	PMM2 "Uncharacterized protein"	0.691	0.485	0.552	8.5e-33
UNIPROTKB|E2R832	251	PMM2 "Uncharacterized protein"	0.731	0.509	0.530	1.4e-32
UNIPROTKB|Q3SZJ9	246	PMM2 "Phosphomannomutase 2" [B	0.731	0.520	0.523	3.7e-32
UNIPROTKB|Q0VC17	262	PMM1 "Phosphomannomutase 1" [B	0.72	0.480	0.507	9.8e-32
UNIPROTKB|F1SRD8	262	PMM1 "Uncharacterized protein"	0.72	0.480	0.507	1.6e-31
MGI|MGI:1353418	262	Pmm1 "phosphomannomutase 1" [M	0.697	0.465	0.524	2e-31

MGI|MGI:1859214 Pmm2 "phosphomannomutase 2" [Mus musculus (taxid:10090)]

 Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
 Identities = 70/124 (56%), Positives = 94/124 (75%)

Query:     7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
             T+CLFD+DGTLT PRQK   E +D  L+KL+  + + +V GSD  K+ EQLG + V+E++
Sbjct:     3 TLCLFDMDGTLTAPRQKITEE-MDGFLQKLRQKTKIGVVGGSDFEKLQEQLGND-VVEKY 60

Query:    67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
             D+VFPENGLVAYK+GKL  K++I  H+GED IQ  INYCL +++ + LP KRG FIEFR 
Sbjct:    61 DYVFPENGLVAYKDGKLLCKQNIQGHLGEDVIQDLINYCLSYIANIKLPKKRGTFIEFRN 120

Query:   127 GLIN 130
             G++N
Sbjct:   121 GMLN 124

GO:0003824 "catalytic activity" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IDA

UNIPROTKB|F1N8Z6 PMM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 69/123 (56%), Positives = 92/123 (74%)

Query:     8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
             +CLFDVDGTLT PRQK   E  +FL ++L+    + +V GSD  K+ EQLG + V+E+FD
Sbjct:    13 LCLFDVDGTLTAPRQKITAEMAEFL-QRLRQKVKVGVVGGSDFEKIKEQLGDD-VVEKFD 70

Query:    68 FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
             +VFPENGLVAYK+GK F K++I  H+GED +Q  INYCL +++ + LP KRG FIEFR G
Sbjct:    71 YVFPENGLVAYKDGKFFSKQNIQSHLGEDVLQDLINYCLSYIAKIKLPKKRGTFIEFRNG 130

Query:   128 LIN 130
             ++N
Sbjct:   131 MLN 133

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

RGD|1309366 Pmm2 "phosphomannomutase 2" [Rattus norvegicus (taxid:10116)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 69/124 (55%), Positives = 93/124 (75%)

Query:     7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
             T+CLFD+DGTLT PRQK   E +D  L+KL+  + + +V GSD  K+ EQLG + V+E++
Sbjct:     3 TLCLFDMDGTLTAPRQKITKE-MDGFLQKLRQKTKIGVVGGSDFEKLQEQLGND-VVEKY 60

Query:    67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
             D+VFPENGLVAYK+GKL  K++I  H+GE  IQ  INYCL +++ + LP KRG FIEFR 
Sbjct:    61 DYVFPENGLVAYKDGKLLCKQNIQGHLGEAVIQDLINYCLSYIAKIKLPKKRGTFIEFRN 120

Query:   127 GLIN 130
             G++N
Sbjct:   121 GMLN 124

GO:0003674 "molecular_function" evidence=ND

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA;ISO

UNIPROTKB|O15305 PMM2 "Phosphomannomutase 2" [Homo sapiens (taxid:9606)]

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 71/130 (54%), Positives = 92/130 (70%)

Query:     1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
             M      +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD  KV EQLG +
Sbjct:     1 MAAPGPALCLFDVDGTLTAPRQKITKEMDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND 59

Query:    61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
              V+E++D+VFPENGLVAYK+GKL  +++I  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct:    60 -VVEKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGT 118

Query:   121 FIEFRTGLIN 130
             FIEFR G++N
Sbjct:   119 FIEFRNGMLN 128

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA;TAS

GO:0006486 "protein glycosylation" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006488 "dolichol-linked oligosaccharide biosynthetic process" evidence=TAS

GO:0018279 "protein N-linked glycosylation via asparagine" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|E1C4B8 PMM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 69/125 (55%), Positives = 92/125 (73%)

Query:     8 ICLFDVDGTLTQPRQ--KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
             +CLFDVDGTLT PRQ  K   E  +FL ++L+    + +V GSD  K+ EQLG + V+E+
Sbjct:     9 LCLFDVDGTLTAPRQATKITAEMAEFL-QRLRQKVKVGVVGGSDFEKIKEQLGDD-VVEK 66

Query:    66 FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
             FD+VFPENGLVAYK+GK F K++I  H+GED +Q  INYCL +++ + LP KRG FIEFR
Sbjct:    67 FDYVFPENGLVAYKDGKFFSKQNIQSHLGEDVLQDLINYCLSYIAKIKLPKKRGTFIEFR 126

Query:   126 TGLIN 130
              G++N
Sbjct:   127 NGMLN 131

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

UNIPROTKB|E2R832 PMM2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 69/130 (53%), Positives = 92/130 (70%)

Query:     1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
             M    + +CLFDVDGTLT PRQK   E +D  L+ L+    + +V GSD  KV EQLG +
Sbjct:     6 MAASGSALCLFDVDGTLTAPRQKITEE-MDGFLQNLRQRIKIGVVGGSDFEKVQEQLGND 64

Query:    61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
              V++++D+VFPENGLVAYK+GKL  K++I  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct:    65 -VVKKYDYVFPENGLVAYKDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGT 123

Query:   121 FIEFRTGLIN 130
             FIEFR G++N
Sbjct:   124 FIEFRNGMLN 133

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

UNIPROTKB|Q3SZJ9 PMM2 "Phosphomannomutase 2" [Bos taurus (taxid:9913)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 68/130 (52%), Positives = 92/130 (70%)

Query:     1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE 60
             M      +CLFDVDGTLT PRQK   + +D  L+KL+    + +V GSD  KV EQLG +
Sbjct:     1 MAAPGPALCLFDVDGTLTAPRQKITKD-MDCFLQKLRQKIKIGVVGGSDFEKVQEQLGDD 59

Query:    61 KVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGN 120
              V++++D+VFPENGLVAY++GKL  K++I  H+GE  IQ  INYCL +++ + LP KRG 
Sbjct:    60 -VIKKYDYVFPENGLVAYRDGKLLCKQNIQGHLGEALIQDLINYCLSYIAKIKLPKKRGT 118

Query:   121 FIEFRTGLIN 130
             FIEFR G++N
Sbjct:   119 FIEFRNGMLN 128

GO:0009298 "GDP-mannose biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

UNIPROTKB|Q0VC17 PMM1 "Phosphomannomutase 1" [Bos taurus (taxid:9913)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 65/128 (50%), Positives = 94/128 (73%)

Query:     4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
             +   +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD +K+AEQLG G++V
Sbjct:    11 KERVLCLFDVDGTLTPARQKIDPEVAAFL-QKLRSRVQIGVVGGSDYSKIAEQLGEGDEV 69

Query:    63 LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
             +E+FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL++++ + LP KRG FI
Sbjct:    70 IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLRYMALLRLPKKRGTFI 129

Query:   123 EFRTGLIN 130
             EFR G++N
Sbjct:   130 EFRNGMLN 137

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

UNIPROTKB|F1SRD8 PMM1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 65/128 (50%), Positives = 93/128 (72%)

Query:     4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
             +   +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD +K+AEQLG G++V
Sbjct:    11 KERVLCLFDVDGTLTPARQKIDPEVAAFL-QKLRSRVQIGVVGGSDYSKIAEQLGEGDEV 69

Query:    63 LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
             +E+FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FI
Sbjct:    70 VEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLHYMALLRLPKKRGTFI 129

Query:   123 EFRTGLIN 130
             EFR G++N
Sbjct:   130 EFRNGMLN 137

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

MGI|MGI:1353418 Pmm1 "phosphomannomutase 1" [Mus musculus (taxid:10090)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 65/124 (52%), Positives = 92/124 (74%)

Query:     8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKVLEQF 66
             +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD +K+AEQLG G++V+E+F
Sbjct:    15 LCLFDVDGTLTPARQKIDPEVSAFL-QKLRSRVQIGVVGGSDYSKIAEQLGEGDEVIEKF 73

Query:    67 DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
             D+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FIEFR 
Sbjct:    74 DYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRN 133

Query:   127 GLIN 130
             G++N
Sbjct:   134 GMLN 137

GO:0003824 "catalytic activity" evidence=IEA

GO:0004615 "phosphomannomutase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016853 "isomerase activity" evidence=IEA

GO:0019307 "mannose biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3SZJ9	PMM2_BOVIN	5, ., 4, ., 2, ., 8	0.5230	0.7314	0.5203	yes	N/A
Q9Z2M7	PMM2_MOUSE	5, ., 4, ., 2, ., 8	0.5645	0.6971	0.5041	yes	N/A
O15305	PMM2_HUMAN	5, ., 4, ., 2, ., 8	0.5461	0.7314	0.5203	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	5.4.2.8	0.824
3rd Layer	5.4.2	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	175
PTZ00174	247	PTZ00174, PTZ00174, phosphomannomutase; Provisiona	9e-54
PLN02423	245	PLN02423, PLN02423, phosphomannomutase	5e-43
pfam03332	219	pfam03332, PMM, Eukaryotic phosphomannomutase	2e-37
cd01427	139	cd01427, HAD_like, Haloacid dehalogenase-like hydr	3e-05
COG0561	264	COG0561, Cof, Predicted hydrolases of the HAD supe	9e-05
pfam08282	254	pfam08282, Hydrolase_3, haloacid dehalogenase-like	7e-04

>gnl|CDD|240305 PTZ00174, PTZ00174, phosphomannomutase; Provisional

 Score =  170 bits (433), Expect = 9e-54
 Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 1/125 (0%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
            TI LFDVDGTLT+PR     E  D L K       + +V GSD  K+ EQLG E VLE 
Sbjct: 5   KTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG-EDVLED 63

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGLVAYK+G+LF  +SI+  +GE+K++ FIN+CL++++ + +P KRG FIE+R
Sbjct: 64  FDYVFSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYR 123

Query: 126 TGLIN 130
            G+IN
Sbjct: 124 NGMIN 128

Length = 247

>gnl|CDD|178043 PLN02423, PLN02423, phosphomannomutase

 Score =  143 bits (362), Expect = 5e-43
 Identities = 61/126 (48%), Positives = 94/126 (74%), Gaps = 2/126 (1%)

Query: 5   ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLE 64
              I LFDVDGTLT PR++A  E L+F+ K+L+ +  + +V GSD++K++EQLG + V+ 
Sbjct: 6   PGVIALFDVDGTLTAPRKEATPEMLEFM-KELRKVVTVGVVGGSDLSKISEQLG-KTVIN 63

Query: 65  QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
            +D+VF ENGLVA+K+GKL   +S+   +GEDK++ FIN+ L +++ + +P KRG FIEF
Sbjct: 64  DYDYVFSENGLVAHKDGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEF 123

Query: 125 RTGLIN 130
           R+G++N
Sbjct: 124 RSGMLN 129

Length = 245

>gnl|CDD|202597 pfam03332, PMM, Eukaryotic phosphomannomutase

 Score =  128 bits (323), Expect = 2e-37
 Identities = 54/98 (55%), Positives = 76/98 (77%), Gaps = 1/98 (1%)

Query: 33  LKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDH 92
           L+KL+    + +V GSD+ K+ EQLG + VL++FD+VF ENGLVAYK GKL   +SII+H
Sbjct: 4   LQKLRKRVTIGVVGGSDLEKIQEQLG-DNVLDEFDYVFSENGLVAYKGGKLLASQSIINH 62

Query: 93  MGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 130
           +GE+K+Q  IN+CL++++ + LP KRG FIEFR G+IN
Sbjct: 63  LGEEKLQKLINFCLRYIADLDLPIKRGTFIEFRNGMIN 100

This enzyme EC:5.4.2.8 is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions. Length = 219

>gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 22/90 (24%), Positives = 30/90 (33%), Gaps = 14/90 (15%)

Query: 8  ICLFDVDGTLTQPRQKAQN-----------ETLDFLLKKLKPLSHLAIVSGSDMNKVAEQ 56
            LFD+DGTL                    E L  L +K   L   A+ +     +V E 
Sbjct: 1  AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKL---ALATNKSRREVLEL 57

Query: 57 LGGEKVLEQFDFVFPENGLVAYKNGKLFEK 86
          L    + + FD V   NG   Y   +    
Sbjct: 58 LEELGLDDYFDPVITSNGAAIYYPKEGLFL 87

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139

>gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]

 Score = 41.2 bits (97), Expect = 9e-05
 Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 11  FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
           FD+DGTL    +    ET + L +  +    + + +G  +  V   L   + L     + 
Sbjct: 8   FDLDGTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSIL---EELGLDGPLI 64

Query: 71  PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQH 108
             NG + Y  G+L  +K +      + ++  +      
Sbjct: 65  TFNGALIYNGGELLFQKPL----SREDVEELLELLEDF 98

Length = 264

>gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 16/103 (15%)

Query: 11  FDVDGTLTQPRQKAQNETLDFLLKKLKPLSH-LAIVSG---SDMNKVAEQLGGEKVLEQF 66
            D+DGTL    +K    T +  +KKL+     + I +G        V E+LG +      
Sbjct: 3   SDLDGTLLNSDKKISERTKE-AIKKLQEKGIKVVIATGRPYRGALPVLEELGLD------ 55

Query: 67  DFVFPENG-LVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQH 108
             V   NG  +  +NGK+  K    + + ++ ++  I Y  ++
Sbjct: 56  LPVICYNGAYIYDENGKILYK----NPISKEDVKEIIEYLKEN 94

This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PTZ00174	247	phosphomannomutase; Provisional	99.95
PRK10513	270	sugar phosphate phosphatase; Provisional	99.95
PLN02423	245	phosphomannomutase	99.94
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.94
PRK10976	266	putative hydrolase; Provisional	99.94
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.93
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.92
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.92
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.92
PLN02887	580	hydrolase family protein	99.91
KOG3189|consensus	252		99.91
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.89
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.86
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	99.83
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.83
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	99.82
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	99.82
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	99.8
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.79
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.78
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.77
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.76
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.76
PF03332	220	PMM: Eukaryotic phosphomannomutase; InterPro: IPR0	99.73
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.71
PLN02382	413	probable sucrose-phosphatase	99.7
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.69
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.67
PLN03017	366	trehalose-phosphatase	99.62
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.62
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	99.58
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	99.56
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	99.49
PLN02151	354	trehalose-phosphatase	99.49
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	99.41
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.41
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	99.4
PLN02580	384	trehalose-phosphatase	99.4
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.39
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	99.32
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.27
PHA03398	303	viral phosphatase superfamily protein; Provisional	99.12
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.0
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	98.83
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.78
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	98.74
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.7
PLN02645	311	phosphoglycolate phosphatase	98.63
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	98.59
PRK10444	248	UMP phosphatase; Provisional	98.58
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	98.56
KOG1050|consensus	732		98.55
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	98.52
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	98.31
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	98.29
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	98.28
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.07
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.05
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	97.98
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	97.91
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	97.89
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	97.85
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	97.85
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	97.82
PRK13222	226	phosphoglycolate phosphatase; Provisional	97.77
PRK13288	214	pyrophosphatase PpaX; Provisional	97.76
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	97.74
PHA02530	300	pseT polynucleotide kinase; Provisional	97.7
PRK13225	273	phosphoglycolate phosphatase; Provisional	97.69
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	97.63
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	97.63
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	97.61
PRK14988	224	GMP/IMP nucleotidase; Provisional	97.57
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	97.57
PRK06769	173	hypothetical protein; Validated	97.53
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	97.5
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	97.45
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	97.44
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	97.43
PLN02940	382	riboflavin kinase	97.42
PLN02954	224	phosphoserine phosphatase	97.4
PRK13582	205	thrH phosphoserine phosphatase; Provisional	97.39
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	97.38
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	97.37
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.35
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	97.33
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	97.33
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	97.32
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	97.32
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	97.29
PLN02575	381	haloacid dehalogenase-like hydrolase	97.24
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	97.23
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	97.2
PTZ00445	219	p36-lilke protein; Provisional	97.16
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	97.13
PRK08238	479	hypothetical protein; Validated	97.11
PRK11587	218	putative phosphatase; Provisional	97.1
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	97.1
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	97.09
PRK10748	238	flavin mononucleotide phosphatase; Provisional	97.07
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	97.07
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.07
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	97.02
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	96.9
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	96.89
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	96.88
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	96.81
COG0546	220	Gph Predicted phosphatases [General function predi	96.79
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	96.77
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	96.74
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	96.72
COG0241	181	HisB Histidinol phosphatase and related phosphatas	96.71
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	96.69
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	96.67
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	96.65
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	96.62
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	96.61
PRK10563	221	6-phosphogluconate phosphatase; Provisional	96.6
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	96.59
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	96.58
PRK13223	272	phosphoglycolate phosphatase; Provisional	96.54
PRK11590	211	hypothetical protein; Provisional	96.53
PRK13226	229	phosphoglycolate phosphatase; Provisional	96.38
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	96.35
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	96.32
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	96.28
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	96.25
COG4996	164	Predicted phosphatase [General function prediction	96.24
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	96.1
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	96.05
PHA02597	197	30.2 hypothetical protein; Provisional	96.04
PRK09449	224	dUMP phosphatase; Provisional	95.97
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	95.87
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	95.84
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	95.83
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	95.74
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	95.71
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	95.64
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	95.63
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	95.5
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	95.36
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	95.34
PRK11133	322	serB phosphoserine phosphatase; Provisional	95.16
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	95.16
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	94.94
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	94.93
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	94.48
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	94.39
KOG1615|consensus	227		94.24
COG4087	152	Soluble P-type ATPase [General function prediction	94.07
COG4359	220	Uncharacterized conserved protein [Function unknow	93.84
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	93.78
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	93.58
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	93.25
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	93.1
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	93.08
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	92.5
KOG3109|consensus	244		92.01
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	91.88
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	91.72
PLN02177	497	glycerol-3-phosphate acyltransferase	91.64
KOG2116|consensus	738		91.32
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	91.09
PLN02499	498	glycerol-3-phosphate acyltransferase	90.97
KOG1618|consensus	389		89.66
KOG2134|consensus	422		89.36
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	89.13
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	88.36
KOG3120|consensus	256		87.91
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	87.35
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	87.33
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	86.43
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	86.37
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	86.26
KOG3040|consensus	262		85.44
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	85.21
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	85.13
KOG2914|consensus	222		84.61
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	84.37
COG0546	220	Gph Predicted phosphatases [General function predi	84.2
PRK11590	211	hypothetical protein; Provisional	84.08
PF09047	35	MEF2_binding: MEF2 binding; InterPro: IPR015134 Th	83.54
PF04312	138	DUF460: Protein of unknown function (DUF460); Inte	83.53
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	83.46
COG3700	237	AphA Acid phosphatase (class B) [General function	81.82
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	81.81
KOG3085|consensus	237		81.38
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	81.24
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	81.01
PRK13223	272	phosphoglycolate phosphatase; Provisional	80.42
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	80.35

>PTZ00174 phosphomannomutase; Provisional

Probab=99.95  E-value=2.3e-27  Score=185.90  Aligned_cols=171  Identities=43%  Similarity=0.710  Sum_probs=122.8

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      |.|+ +|+||+|||||||+++++++++++++ |++++++ ++|++||||++..+.+.++.... ...+++||+|||+|+.
T Consensus         1 ~~~~-~klia~DlDGTLL~~~~~is~~~~~a-i~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~-~~~~~~I~~NGa~I~~   77 (247)
T PTZ00174          1 MEMK-KTILLFDVDGTLTKPRNPITQEMKDT-LAKLKSKGFKIGVVGGSDYPKIKEQLGEDVL-EDFDYVFSENGLVAYK   77 (247)
T ss_pred             CCCC-CeEEEEECcCCCcCCCCCCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHhhhhh-cccCeEEeCCceEEEE
Confidence            4455 79999999999999999999999999 9999999 99999999999999888864211 1124789999999998


Q ss_pred             CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch--------------hhcc-HHHHHHH
Q psy16481         80 NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII--------------DHMG-EDKIQTF  144 (175)
Q Consensus        80 ~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~-~~~~~~~  144 (175)
                      +++.+++..+...++.+.+.++++.+.++...+.++...+.|+..........+              .+.. .+...++
T Consensus        78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (247)
T PTZ00174         78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF  157 (247)
T ss_pred             CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence            888888877533347899999999887653333333444555443211100000              0111 2234567


Q ss_pred             HHHHHHhcCCCCCceee--cceE-EecCCcccC
Q psy16481        145 INYCLQHLSTVTLPFKR--GNFI-EFRTGLINH  174 (175)
Q Consensus       145 ~~~l~~~~~~~~~~~s~--~~~i-i~~~Gv~K~  174 (175)
                      .+.+.+.|+++.+..+.  +.++ ++|+|+||.
T Consensus       158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg  190 (247)
T PTZ00174        158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKT  190 (247)
T ss_pred             HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHH
Confidence            77888888766666665  3688 999999995

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.95  E-value=8.9e-27  Score=184.16  Aligned_cols=165  Identities=13%  Similarity=0.112  Sum_probs=122.7

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee--CC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK--NG   81 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~--~~   81 (175)
                      ++|+||+|||||||+++++++++++++ |++|+++ ++|++||||++.++.+.++.+++....+++|++|||.|++  +|
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~a-i~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~   80 (270)
T PRK10513          2 AIKLIAIDMDGTLLLPDHTISPAVKQA-IAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG   80 (270)
T ss_pred             ceEEEEEecCCcCcCCCCccCHHHHHH-HHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence            489999999999999999999999999 9999999 9999999999999988888766432234799999999995  68


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc------------ccc-------ccch--------h
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT------------GLI-------NSII--------D  134 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~------------~~~-------~~~~--------~  134 (175)
                      +.+++..+    +.+.+.++++++++.+..+.++..++.|.....            ...       .+..        .
T Consensus        81 ~~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~  156 (270)
T PRK10513         81 ETVAQTAL----SYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMM  156 (270)
T ss_pred             CEEEecCC----CHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEE
Confidence            88998888    999999999998877654444443444432100            000       0000        0


Q ss_pred             hccHHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        135 HMGEDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       135 ~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +...+...++.+.+.+.+. .+.++.|.++++ ++|+|+||.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg  198 (270)
T PRK10513        157 IDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKG  198 (270)
T ss_pred             eCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChH
Confidence            1123334466666766665 477778888899 999999995

>PLN02423 phosphomannomutase

Probab=99.94  E-value=4.8e-26  Score=178.23  Aligned_cols=172  Identities=38%  Similarity=0.691  Sum_probs=127.3

Q ss_pred             CCCCcce-EEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          1 MTCRANT-ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         1 ~~~~~~k-li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      |...+.| ++|||||||||+++++++++++++ |++|+++++|++||||++..+.+.++... .....++|++||+.++.
T Consensus         1 ~~~~~~~~i~~~D~DGTLl~~~~~i~~~~~~a-i~~l~~~i~fviaTGR~~~~~~~~~~~~~-~~~~~~~I~~NGa~i~~   78 (245)
T PLN02423          1 MAARKPGVIALFDVDGTLTAPRKEATPEMLEF-MKELRKVVTVGVVGGSDLSKISEQLGKTV-INDYDYVFSENGLVAHK   78 (245)
T ss_pred             CCCCccceEEEEeccCCCcCCCCcCCHHHHHH-HHHHHhCCEEEEECCcCHHHHHHHhcccc-cccCCEEEECCceEEEe
Confidence            4455666 555999999999999999999999 99999669999999999999988887631 11223789999999998


Q ss_pred             CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccc--------h------hhcc-HHHHHHH
Q psy16481         80 NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSI--------I------DHMG-EDKIQTF  144 (175)
Q Consensus        80 ~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~------~~~~-~~~~~~~  144 (175)
                      +|+.++...+...++.+.++++++++++......+++..+.|++.+.......        .      .+.. .+...++
T Consensus        79 ~g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~  158 (245)
T PLN02423         79 DGKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKM  158 (245)
T ss_pred             CCEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHH
Confidence            89999886654555889999999999876544445555566665432221000        0      0111 2344577


Q ss_pred             HHHHHHhcCCCCCceeec--ceE-EecCCcccC
Q psy16481        145 INYCLQHLSTVTLPFKRG--NFI-EFRTGLINH  174 (175)
Q Consensus       145 ~~~l~~~~~~~~~~~s~~--~~i-i~~~Gv~K~  174 (175)
                      .+.+.+.|++++++.|.+  .|+ ++|+||||.
T Consensus       159 ~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg  191 (245)
T PLN02423        159 VSVLREKFAHLNLTYSIGGQISFDVFPQGWDKT  191 (245)
T ss_pred             HHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHH
Confidence            888889998778877765  699 999999995

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.94  E-value=1.7e-26  Score=182.95  Aligned_cols=161  Identities=17%  Similarity=0.246  Sum_probs=122.5

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+||+|||||||++++.|+++++++ |++|+++ +.|++||||++..+.+.++.+++.   .++||+|||.|++ +++.
T Consensus         2 ~kli~~DlDGTLl~~~~~i~~~~~~a-i~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~I~~NGa~I~~~~~~~   77 (272)
T PRK15126          2 ARLAAFDMDGTLLMPDHHLGEKTLST-LARLRERDITLTFATGRHVLEMQHILGALSLD---AYLITGNGTRVHSLEGEL   77 (272)
T ss_pred             ccEEEEeCCCcCcCCCCcCCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC---CcEEecCCcEEEcCCCCE
Confidence            69999999999999999999999999 9999999 999999999999999888877543   3789999999995 7788


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc----------cc-cc------cc-h------hhccHH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT----------GL-IN------SI-I------DHMGED  139 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~----------~~-~~------~~-~------~~~~~~  139 (175)
                      ++...|    +.+.+.++++++++.+..+.++..++.|.....          .. ..      +. .      .+..++
T Consensus        78 l~~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~  153 (272)
T PRK15126         78 LHRQDL----PADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHD  153 (272)
T ss_pred             EEeecC----CHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHH
Confidence            888888    999999999998877654444444443321100          00 00      00 0      111334


Q ss_pred             HHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        140 KIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       140 ~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...++.+.+.+.++ .+.++.|.++++ ++|+|+||.
T Consensus       154 ~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg  190 (272)
T PRK15126        154 DLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKG  190 (272)
T ss_pred             HHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChH
Confidence            45567777777776 477777888899 999999995

>PRK10976 putative hydrolase; Provisional

Probab=99.94  E-value=3.5e-26  Score=180.52  Aligned_cols=161  Identities=14%  Similarity=0.142  Sum_probs=120.7

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+||+|||||||+++++++++++++ |++++++ ++|++||||++..+.+.++.+++.   .++||+|||+|++ +|+.
T Consensus         2 ikli~~DlDGTLl~~~~~is~~~~~a-i~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~I~~NGa~i~~~~~~~   77 (266)
T PRK10976          2 YQVVASDLDGTLLSPDHTLSPYAKET-LKLLTARGIHFVFATGRHHVDVGQIRDNLEIK---SYMITSNGARVHDTDGNL   77 (266)
T ss_pred             ceEEEEeCCCCCcCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC---CeEEEcCCcEEECCCCCE
Confidence            69999999999999999999999999 9999999 999999999999998888876542   3789999999995 6888


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHh-cccccccccccceeeeccc-----------ccc------cc--h-----h-hcc
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQH-LSTVTLPFKRGNFIEFRTG-----------LIN------SI--I-----D-HMG  137 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~-----------~~~------~~--~-----~-~~~  137 (175)
                      +++..|    +.+.+.+++++++++ ...+.++..++.|+.....           ...      +.  .     . ...
T Consensus        78 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~  153 (266)
T PRK10976         78 IFSHNL----DRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDS  153 (266)
T ss_pred             ehhhcC----CHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCC
Confidence            888888    999999999998764 2223333444444321100           000      00  0     0 112


Q ss_pred             HHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        138 EDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       138 ~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      .+...++.+.+.+.++ .+.++.|.++++ ++|+|+||.
T Consensus       154 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg  192 (266)
T PRK10976        154 HEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKG  192 (266)
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChH
Confidence            3344566777777776 477778888899 999999995

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.93  E-value=8.2e-25  Score=172.81  Aligned_cols=102  Identities=19%  Similarity=0.232  Sum_probs=89.7

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee--CC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK--NG   81 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~--~~   81 (175)
                      ++|+||+|||||||++++.++++++++ |++++++ +.|++||||++..+.+.++.+++.   .++|++|||+|++  ++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~a-i~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~I~~NGa~i~d~~~~   77 (272)
T PRK10530          2 TYRVIALDLDGTLLTPKKTILPESLEA-LARAREAGYKVIIVTGRHHVAIHPFYQALALD---TPAICCNGTYLYDYQAK   77 (272)
T ss_pred             CccEEEEeCCCceECCCCccCHHHHHH-HHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC---CCEEEcCCcEEEecCCC
Confidence            479999999999999999999999999 9999999 999999999999998888876542   2689999999995  67


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHhcccccc
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTL  114 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~  114 (175)
                      ++++...|    +.+.+.++++++++++....+
T Consensus        78 ~~l~~~~l----~~~~~~~i~~~~~~~~~~~~~  106 (272)
T PRK10530         78 KVLEADPL----PVQQALQVIEMLDEHQIHGLM  106 (272)
T ss_pred             EEEEecCC----CHHHHHHHHHHHHhCCcEEEE
Confidence            88998888    999999999999887654333

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.92  E-value=1.8e-24  Score=170.69  Aligned_cols=162  Identities=15%  Similarity=0.246  Sum_probs=120.1

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      .+|+||+|||||||+++++++++++++ |++++++ ++|++||||++..+.+.+..+++..   ++||+||+.|+..++.
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~   77 (264)
T COG0561           2 MIKLLAFDLDGTLLDSNKTISPETKEA-LARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGEL   77 (264)
T ss_pred             CeeEEEEcCCCCccCCCCccCHHHHHH-HHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcE
Confidence            579999999999999999999999999 9999999 9999999999999999998876432   7999999999988999


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcc-cccccccccceeeeccc-c---------ccc--------ch----hh-ccHH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLS-TVTLPFKRGNFIEFRTG-L---------INS--------II----DH-MGED  139 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~-~---------~~~--------~~----~~-~~~~  139 (175)
                      ++...+    +.+.+.++++++.+... ...++..++.+...... .         ...        ..    .+ ...+
T Consensus        78 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (264)
T COG0561          78 LFQKPL----SREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHE  153 (264)
T ss_pred             EeeecC----CHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChH
Confidence            998888    99999999999977633 22333333332221110 0         000        00    00 1134


Q ss_pred             HHHHHHHHHHHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        140 KIQTFINYCLQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       140 ~~~~~~~~l~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...++.+.+.+.+++  ..++.|.+.++ ++|+|+||.
T Consensus       154 ~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~  191 (264)
T COG0561         154 ILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKG  191 (264)
T ss_pred             hHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchH
Confidence            455777788888874  44444455558 999999995

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.92  E-value=1.3e-24  Score=168.25  Aligned_cols=158  Identities=18%  Similarity=0.252  Sum_probs=126.6

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCcee-eeCCeEeec
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVA-YKNGKLFEK   86 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i-~~~~~~i~~   86 (175)
                      ||+||||||+++++.|+++++++ |++|+++ +.|++||||++..+.++++.+++.   .++|++|||.+ ...|+.++.
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~   76 (254)
T PF08282_consen    1 IFSDLDGTLLNSDGKISPETIEA-LKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYE   76 (254)
T ss_dssp             EEEECCTTTCSTTSSSCHHHHHH-HHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEE
T ss_pred             cEEEECCceecCCCeeCHHHHHH-HHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchh
Confidence            79999999999999999999999 9999999 999999999999999999876542   48999999999 458999999


Q ss_pred             cchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccc-c----------ccc-----c---------h-hhccHHH
Q psy16481         87 KSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG-L----------INS-----I---------I-DHMGEDK  140 (175)
Q Consensus        87 ~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~-~----------~~~-----~---------~-~~~~~~~  140 (175)
                      ..|    +.+.+.++++++.++...+.++..+..|+..... .          ...     .         . .....+.
T Consensus        77 ~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~  152 (254)
T PF08282_consen   77 KPI----DSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPED  152 (254)
T ss_dssp             ESB-----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHH
T ss_pred             hhe----eccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchh
Confidence            888    9999999999999988665555555555543300 0          000     0         0 1224566


Q ss_pred             HHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        141 IQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       141 ~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ..++.+.+.+.+++ .....+.++++ ++|+|+||.
T Consensus       153 ~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~  188 (254)
T PF08282_consen  153 LEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKG  188 (254)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHH
T ss_pred             hhhhhhhhccccCcceeEEEecccceEEeeCCCCHH
Confidence            77889999999987 47788899999 999999995

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.92  E-value=2.8e-24  Score=168.80  Aligned_cols=159  Identities=18%  Similarity=0.228  Sum_probs=118.9

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC-CeEee
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN-GKLFE   85 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~-~~~i~   85 (175)
                      +||+||||||++++++++++++++ |++|+++ ++|++||||++..+.+.++.+++.   .++|++|||.|+.. |+.++
T Consensus         1 li~~DlDGTLl~~~~~i~~~~~~~-i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~---~~~I~~NGa~i~~~~~~~i~   76 (256)
T TIGR00099         1 LIFIDLDGTLLNDDHTISPSTKEA-LAKLREKGIKVVLATGRPYKEVKNILKELGLD---TPFITANGAAVIDDQGEILY   76 (256)
T ss_pred             CEEEeCCCCCCCCCCccCHHHHHH-HHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC---CCEEEcCCcEEECCCCCEEe
Confidence            589999999999999999999999 9999999 999999999999998888876532   27999999999964 68899


Q ss_pred             ccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc-c------------ccccc--------h-----hhccHH
Q psy16481         86 KKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT-G------------LINSI--------I-----DHMGED  139 (175)
Q Consensus        86 ~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~-~------------~~~~~--------~-----~~~~~~  139 (175)
                      ...|    +.+.++++++++.+++..+.++..++.|+.... .            .....        .     .+...+
T Consensus        77 ~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (256)
T TIGR00099        77 KKPL----DLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPE  152 (256)
T ss_pred             ecCC----CHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHH
Confidence            8888    999999999999887754444444444442110 0            00000        0     111233


Q ss_pred             HHHHHHHHHHH-hcC-CCCCceeecceE-EecCCcccC
Q psy16481        140 KIQTFINYCLQ-HLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       140 ~~~~~~~~l~~-~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...++.+.+.+ .+. ++.++.+++.++ ++|+|+||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~  190 (256)
T TIGR00099       153 DLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKG  190 (256)
T ss_pred             HHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChH
Confidence            44456666653 444 477778888899 999999995

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PLN02887 hydrolase family protein

Probab=99.91  E-value=1.2e-23  Score=180.96  Aligned_cols=165  Identities=13%  Similarity=0.092  Sum_probs=120.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccc------cceEEecCCcee
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQ------FDFVFPENGLVA   77 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~------~~~~i~~NGa~i   77 (175)
                      ++|+||+|||||||+++++|+++++++ |++++++ +.|++||||++..+.+.++.+++...      ..++|++|||+|
T Consensus       307 ~iKLIa~DLDGTLLn~d~~Is~~t~eA-I~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I  385 (580)
T PLN02887        307 KFSYIFCDMDGTLLNSKSQISETNAKA-LKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLV  385 (580)
T ss_pred             CccEEEEeCCCCCCCCCCccCHHHHHH-HHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEE
Confidence            579999999999999999999999999 9999999 99999999999999888876543211      025678899999


Q ss_pred             ee-CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccc-------------cccc---c------h-
Q psy16481         78 YK-NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG-------------LINS---I------I-  133 (175)
Q Consensus        78 ~~-~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~-------------~~~~---~------~-  133 (175)
                      ++ +|+.+++..|    +.+.+.++++++.+++..+.++..++.|......             ....   .      . 
T Consensus       386 ~d~~g~~I~~~~L----~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i  461 (580)
T PLN02887        386 YGRQGREIYRSNL----DQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADI  461 (580)
T ss_pred             EECCCcEEEEEeC----CHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCe
Confidence            95 7788898888    9999999999988876654444444444321100             0000   0      0 


Q ss_pred             ----hhccHHH-HHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        134 ----DHMGEDK-IQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       134 ----~~~~~~~-~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                          .+...+. ...+.+.+.+.+. .+.++.|.++++ ++|+|+||.
T Consensus       462 ~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG  509 (580)
T PLN02887        462 QKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKG  509 (580)
T ss_pred             eEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHH
Confidence                0011111 2345566666665 478888888899 999999995

>KOG3189|consensus

Probab=99.91  E-value=1.9e-23  Score=154.59  Aligned_cols=168  Identities=51%  Similarity=0.854  Sum_probs=150.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      ..-|+.||.||||+.+...++++..+. |+.|+.++.+.++.|..+..+.++++.. +...+||..++||-+-|.+|+.+
T Consensus        10 ~~~l~lfdvdgtLt~~r~~~~~e~~~~-l~~lr~~v~ig~VggsDl~k~~eqlG~~-Vl~~fDY~F~ENGl~~yk~gk~~   87 (252)
T KOG3189|consen   10 EETLCLFDVDGTLTPPRQKVTPEMLEF-LQKLRKKVTIGFVGGSDLSKQQEQLGDN-VLEEFDYVFSENGLVAYKGGKLL   87 (252)
T ss_pred             CceEEEEecCCccccccccCCHHHHHH-HHHHhhheEEEEeecHHHHHHHHHhchh-HHhhhcccccCCCeeEeeCCcch
Confidence            346899999999999999999999999 9999888999999999999998888553 44678899999999999999999


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch--------------hhccHHHHH-HHHHHHH
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII--------------DHMGEDKIQ-TFINYCL  149 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~-~~~~~l~  149 (175)
                      ..+.+..+|.++.+++++.+|..|-..+.++...|+++|.+++|.+++|              .++....++ ++++.++
T Consensus        88 ~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR~K~v~~Lr  167 (252)
T KOG3189|consen   88 SKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIREKFVEALR  167 (252)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence            9999999999999999999999999888899999999999999998887              234455666 8999999


Q ss_pred             HhcCCCCCceeecceE---EecCCcccC
Q psy16481        150 QHLSTVTLPFKRGNFI---EFRTGLINH  174 (175)
Q Consensus       150 ~~~~~~~~~~s~~~~i---i~~~Gv~K~  174 (175)
                      ++|+++.+++|-|+.|   +.|+||+|.
T Consensus       168 ~~F~~~gLtFSIGGQISfDvFP~GWDKt  195 (252)
T KOG3189|consen  168 EEFADYGLTFSIGGQISFDVFPKGWDKT  195 (252)
T ss_pred             HHhcccCeeEEECCeEEEeecCCCcchh
Confidence            9999999999988887   889999994

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.89  E-value=1.7e-22  Score=160.18  Aligned_cols=100  Identities=15%  Similarity=0.135  Sum_probs=85.4

Q ss_pred             CCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC
Q psy16481          2 TCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN   80 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~   80 (175)
                      |-..+|+||+|||||||++++.++++++++ |++|+++ ++|++||||++..+.+.++.+++.  ..++|++|||.|+..
T Consensus         3 ~~~~~~lI~~DlDGTLL~~~~~i~~~~~~a-i~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~--~~~~I~~NGa~I~~~   79 (271)
T PRK03669          3 SLQDPLLIFTDLDGTLLDSHTYDWQPAAPW-LTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ--GLPLIAENGAVIQLD   79 (271)
T ss_pred             CcCCCeEEEEeCccCCcCCCCcCcHHHHHH-HHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC--CCcEEEeCCCEEEec
Confidence            557899999999999999988999999999 9999999 999999999999999888887542  137999999999963


Q ss_pred             C--e-----EeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         81 G--K-----LFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        81 ~--~-----~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                      +  +     .++...+    +.+.+.+++++++++
T Consensus        80 ~~~~~~~~~~~~~~~l----~~~~~~~i~~~~~~~  110 (271)
T PRK03669         80 EQWQDHPDFPRIISGI----SHGEIRQVLNTLREK  110 (271)
T ss_pred             CcccCCCCceEeecCC----CHHHHHHHHHHHHHh
Confidence            2  1     3555666    999999999998876

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.86  E-value=4.7e-21  Score=147.97  Aligned_cols=94  Identities=17%  Similarity=0.151  Sum_probs=77.8

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee--CC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK--NG   81 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~--~~   81 (175)
                      .+|+|++||||||+++++.++++++++ |++++++ ++|++||||++..+.+.+..+++.   .++|++|||.++.  ++
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~   77 (230)
T PRK01158          2 KIKAIAIDIDGTITDKDRRLSLKAVEA-IRKAEKLGIPVILATGNVLCFARAAAKLIGTS---GPVIAENGGVISVGFDG   77 (230)
T ss_pred             ceeEEEEecCCCcCCCCCccCHHHHHH-HHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CcEEEecCeEEEEcCCC
Confidence            379999999999999999999999999 9999999 999999999999998877776542   3789999999986  37


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                      +.++...+    +  .+.++++.+.++
T Consensus        78 ~~~~~~~~----~--~~~~~~~~~~~~   98 (230)
T PRK01158         78 KRIFLGDI----E--ECEKAYSELKKR   98 (230)
T ss_pred             CEEEEcch----H--HHHHHHHHHHHh
Confidence            77776665    3  355666666554

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=99.83  E-value=1.9e-19  Score=142.50  Aligned_cols=155  Identities=15%  Similarity=0.058  Sum_probs=105.6

Q ss_pred             CcceEEEEecCCCccCC-----CCCCCHHHHHHHHHhhCC-C-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          4 RANTICLFDVDGTLTQP-----RQKAQNETLDFLLKKLKP-L-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~-----~~~i~~~~~~~~l~~l~~-~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      ....+|++|+||||++.     +..++++++++ |++|++ . +.|+|||||++..+.++++.++     .+++++||+.
T Consensus        12 ~~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~-L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~-----~~~i~~nGa~   85 (266)
T PRK10187         12 SANYAWFFDLDGTLAEIKPHPDQVVVPDNILQG-LQLLATANDGALALISGRSMVELDALAKPYR-----FPLAGVHGAE   85 (266)
T ss_pred             CCCEEEEEecCCCCCCCCCCcccccCCHHHHHH-HHHHHhCCCCcEEEEeCCCHHHHHHhcCccc-----ceEEEeCCCe
Confidence            45689999999999994     56999999999 999998 5 9999999999999998887653     2588999999


Q ss_pred             eeeCCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch-hhc-cHHHHHHHHHHHHHhcCC
Q psy16481         77 AYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII-DHM-GEDKIQTFINYCLQHLST  154 (175)
Q Consensus        77 i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~  154 (175)
                      ++..+..++...+    +.+.++++.+.+++...     ...|.+++.+.....+.. ... ..+...++.+.+.+.++.
T Consensus        86 i~~~~~~~~~~~l----~~~~~~~i~~~l~~~~~-----~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~  156 (266)
T PRK10187         86 RRDINGKTHIVHL----PDAIARDISVQLHTALA-----QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQ  156 (266)
T ss_pred             eecCCCCeeeccC----ChhHHHHHHHHHHHHhc-----cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCc
Confidence            9853322333455    77878888777765421     123444444322111111 111 123344666677766664


Q ss_pred             CCCceeecceE-EecCCcccC
Q psy16481        155 VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       155 ~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +. +.++..++ +.|+|+||.
T Consensus       157 ~~-~~~g~~~lEi~p~g~~Kg  176 (266)
T PRK10187        157 LA-LQPGKCVVEIKPRGTNKG  176 (266)
T ss_pred             eE-EeCCCEEEEeeCCCCCHH
Confidence            33 34566777 889999995

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.83  E-value=5.9e-20  Score=141.27  Aligned_cols=94  Identities=15%  Similarity=0.081  Sum_probs=76.6

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-C-CeE-
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-N-GKL-   83 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~-~~~-   83 (175)
                      +||+|||||||++++.+++.++++ |++|+++ +.|++||||++..+...++.+++.  ..++||+|||.|+. . ++. 
T Consensus         1 ~i~~DlDGTLL~~~~~~~~~~~~~-l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~--~~~~I~~NGa~i~~~~~~~~~   77 (221)
T TIGR02463         1 WVFSDLDGTLLDSHSYDWQPAAPW-LTRLQEAGIPVILCTSKTAAEVEYLQKALGLT--GDPYIAENGAAIHLEELWREE   77 (221)
T ss_pred             CEEEeCCCCCcCCCCCCcHHHHHH-HHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--CCcEEEeCCcEEEcCcccccC
Confidence            589999999999887677779999 9999999 999999999999998888876542  13799999999995 2 332 


Q ss_pred             ----eeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         84 ----FEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        84 ----i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                          ++...+    +.+.+.++++++.+.
T Consensus        78 ~~~~~~~~~~----~~~~~~~i~~~~~~~  102 (221)
T TIGR02463        78 PGYPRIILGI----SYGIIRLVLETLSEE  102 (221)
T ss_pred             CCceEEecCC----CHHHHHHHHHHHHHH
Confidence                244556    888899998876654

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=99.82  E-value=2.9e-19  Score=154.46  Aligned_cols=98  Identities=22%  Similarity=0.238  Sum_probs=84.7

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-C
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-N   80 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~   80 (175)
                      ...+|+||+||||||+++++.++++++++ |++|+++ +.|++||||++..+..+++.+++.   +++|++|||.|+. +
T Consensus       413 ~~~~KLIfsDLDGTLLd~d~~i~~~t~eA-L~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~---~~~I~eNGA~I~~~~  488 (694)
T PRK14502        413 GQFKKIVYTDLDGTLLNPLTYSYSTALDA-LRLLKDKELPLVFCSAKTMGEQDLYRNELGIK---DPFITENGGAIFIPK  488 (694)
T ss_pred             CceeeEEEEECcCCCcCCCCccCHHHHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC---CeEEEcCCCEEEECC
Confidence            44789999999999999988888899999 9999999 999999999999998888776532   3799999999995 2


Q ss_pred             --------------CeEeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         81 --------------GKLFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        81 --------------~~~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                                    ++.+++..+    +.+.++++++.+++.
T Consensus       489 ~~~~~~~~~~~~~~~~iI~~~~l----~~e~i~~IL~~lke~  526 (694)
T PRK14502        489 DYFRLPFAYDRVAGNYLVIELGM----AYKDIRHILKKALAE  526 (694)
T ss_pred             CcccccccccccCCCeEEEEcCC----CHHHHHHHHHHHHHh
Confidence                          346777777    999999999988773

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=99.82  E-value=1.8e-19  Score=139.47  Aligned_cols=91  Identities=20%  Similarity=0.136  Sum_probs=78.4

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-C-----
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-N-----   80 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~-----   80 (175)
                      +|+|||||||++++ .++++++++ |++|+++ +.|++||||++..+...+..+++.   +++|++|||.|+. .     
T Consensus         1 li~~DlDGTLl~~~-~~~~~~~~a-i~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~---~~~I~~NGa~I~~~~~~~~~   75 (225)
T TIGR02461         1 VIFTDLDGTLLPPG-YEPGPAREA-LEELKDLGFPIVFVSSKTRAEQEYYREELGVE---PPFIVENGGAIFIPRGYFPF   75 (225)
T ss_pred             CEEEeCCCCCcCCC-CCchHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CcEEEcCCcEEEecCccccc
Confidence            58999999999954 466789999 9999999 999999999999998888776542   3799999999995 2     


Q ss_pred             ---------CeEeeccchhhhhCHHHHHHHHHHHHH
Q psy16481         81 ---------GKLFEKKSIIDHMGEDKIQTFINYCLQ  107 (175)
Q Consensus        81 ---------~~~i~~~~l~~~l~~~~~~~i~~~~~~  107 (175)
                               ++.+++..+    +.+.++++++.+.+
T Consensus        76 ~~~~~~~~~~~~i~~~~l----~~~~~~~il~~~~~  107 (225)
T TIGR02461        76 PVGAGREVGNYEVIELGK----PVAKIRAALKEAEN  107 (225)
T ss_pred             cccccccCCCeEEEEcCC----CHHHHHHHHHHHHH
Confidence                     556888888    99999999998887

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=99.80  E-value=1e-18  Score=132.72  Aligned_cols=155  Identities=17%  Similarity=0.230  Sum_probs=97.0

Q ss_pred             EEEEecCCCccCCC-CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEee
Q psy16481          8 ICLFDVDGTLTQPR-QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFE   85 (175)
Q Consensus         8 li~~DlDGTLl~~~-~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i~   85 (175)
                      +|++|+||||++++ .+++++++++ |++|+++ +.|++||||++..+..+++.++     .++|++||+.++..++.++
T Consensus         1 li~~D~DgTL~~~~~~~~~~~~~~~-l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~-----~~~i~~nGa~i~~~~~~~~   74 (204)
T TIGR01484         1 LLFFDLDGTLLDPNAHELSPETIEA-LERLREAGVKVVLVTGRSLAEIKELLKQLP-----LPLIAENGALIFYPGEILY   74 (204)
T ss_pred             CEEEeCcCCCcCCCCCcCCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHhCC-----CCEEECCCcEEEECCEEEE
Confidence            58999999999987 7899999999 9999999 9999999999999988887632     3799999999998776665


Q ss_pred             ccchhhhhCHHHHHHHHHHHHHhcccccccc--cccceeeecccccccch-hh-ccHHHHHHHHHHHHHh---cCCCCCc
Q psy16481         86 KKSIIDHMGEDKIQTFINYCLQHLSTVTLPF--KRGNFIEFRTGLINSII-DH-MGEDKIQTFINYCLQH---LSTVTLP  158 (175)
Q Consensus        86 ~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~---~~~~~~~  158 (175)
                      ..      +.+.++.++++..+....+..+.  ..+..++.+.....+.. .. ........+.+.+...   ++++.+.
T Consensus        75 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (204)
T TIGR01484        75 IE------PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAI  148 (204)
T ss_pred             Ec------ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEE
Confidence            43      23334555444432211111110  11112222111111110 00 0111122333444332   2346666


Q ss_pred             eeecceE-EecCCcccC
Q psy16481        159 FKRGNFI-EFRTGLINH  174 (175)
Q Consensus       159 ~s~~~~i-i~~~Gv~K~  174 (175)
                      .|+++++ ++|+|++|.
T Consensus       149 ~s~~~~~ev~p~~~~K~  165 (204)
T TIGR01484       149 YVGKTDLEVLPAGVDKG  165 (204)
T ss_pred             EecCCEEEEecCCCChH
Confidence            6788889 999999994

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.79  E-value=7.8e-19  Score=134.64  Aligned_cols=73  Identities=22%  Similarity=0.290  Sum_probs=64.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      +|+|++||||||+++++.+++++.++ |++|+++ +.|++||||++..+.+++..+++.   .++|++||++|+..++
T Consensus         1 ik~v~~DlDGTLl~~~~~i~~~~~~~-i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~---~~~i~~NGa~i~~~~~   74 (215)
T TIGR01487         1 IKLVAIDIDGTLTEPNRMISERAIEA-IRKAEKKGIPVSLVTGNTVPFARALAVLIGTS---GPVVAENGGVIFYNKE   74 (215)
T ss_pred             CcEEEEecCCCcCCCCcccCHHHHHH-HHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC---CcEEEccCcEEEeCCC
Confidence            58999999999999999999999999 9999999 999999999999998887776432   2789999999997433

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.78  E-value=2.8e-18  Score=134.89  Aligned_cols=92  Identities=21%  Similarity=0.178  Sum_probs=76.2

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC-C-eE-
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN-G-KL-   83 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~-~-~~-   83 (175)
                      +|++||||||+++++.+.+.++++ |++|+++ +.|++||||++..+...++.+++.   +++||+|||.|+.. + +. 
T Consensus         1 li~~DlDGTll~~~~~~~~~~~~~-i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~---~~~I~~NGa~i~~~~~~~~~   76 (256)
T TIGR01486         1 WIFTDLDGTLLDPHGYDWGPAKEV-LERLQELGIPVIPCTSKTAAEVEYLRKELGLE---DPFIVENGGAIYGPRGWFTE   76 (256)
T ss_pred             CEEEcCCCCCcCCCCcCchHHHHH-HHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC---CcEEEcCCeEEEeCCCcccC
Confidence            589999999999888444579999 9999999 999999999999998888887542   47999999999963 3 22 


Q ss_pred             ----eeccchhhhhCHHHHHHHHHHHHH
Q psy16481         84 ----FEKKSIIDHMGEDKIQTFINYCLQ  107 (175)
Q Consensus        84 ----i~~~~l~~~l~~~~~~~i~~~~~~  107 (175)
                          ++...+    +.+.++++++.+.+
T Consensus        77 ~~~~~~~~~i----~~~~~~~il~~~~~  100 (256)
T TIGR01486        77 PEYPVIALGI----PYEKIRARLEELSE  100 (256)
T ss_pred             CCeEEEEcCC----CHHHHHHHHHHHHH
Confidence                566677    99999999986544

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.77  E-value=2.8e-18  Score=132.00  Aligned_cols=77  Identities=22%  Similarity=0.221  Sum_probs=65.6

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCC--eEee
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNG--KLFE   85 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~--~~i~   85 (175)
                      |+|||||||+++++.++++++++ |++++++ +.|++||||++..+.+++..+++   ..++|++||+.|+..+  +.++
T Consensus         1 i~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~---~~~~i~~nGa~i~~~~~~~~~~   76 (225)
T TIGR01482         1 IASDIDGTLTDPNRAINESALEA-IRKAESVGIPVVLVTGNSVQFARALAKLIGT---PDPVIAENGGEISYNEGMDDIF   76 (225)
T ss_pred             CeEeccCccCCCCcccCHHHHHH-HHHHHHCCCEEEEEcCCchHHHHHHHHHhCC---CCeEEEecCcEEEeCCCCceEE
Confidence            68999999999999999999999 9999999 99999999999999888777643   2479999999999643  4556


Q ss_pred             ccch
Q psy16481         86 KKSI   89 (175)
Q Consensus        86 ~~~l   89 (175)
                      ...+
T Consensus        77 ~~~~   80 (225)
T TIGR01482        77 LAYL   80 (225)
T ss_pred             eccc
Confidence            5555

catalyze the same reaction as SPP.

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.76  E-value=6.7e-18  Score=132.31  Aligned_cols=73  Identities=21%  Similarity=0.190  Sum_probs=62.2

Q ss_pred             eEEEEecCCCccC---CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCC
Q psy16481          7 TICLFDVDGTLTQ---PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNG   81 (175)
Q Consensus         7 kli~~DlDGTLl~---~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~   81 (175)
                      .+|++|||||||+   .++++++++.+. +++++++ +.|++||||++.++..+...+++. ..+++|++||+.|+..|
T Consensus         2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~-i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~-~p~~~I~~NGa~I~~~~   78 (249)
T TIGR01485         2 LLLVSDLDNTLVDHTDGDNQALLRLNAL-LEDHRGEDSLLVYSTGRSPHSYKELQKQKPLL-TPDIWVTSVGSEIYYGG   78 (249)
T ss_pred             eEEEEcCCCcCcCCCCCChHHHHHHHHH-HHHhhccCceEEEEcCCCHHHHHHHHhcCCCC-CCCEEEEcCCceEEeCC
Confidence            5899999999997   667899999999 9999999 999999999999998887655432 23368999999999755

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.76  E-value=4.3e-18  Score=135.12  Aligned_cols=95  Identities=16%  Similarity=0.118  Sum_probs=81.5

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC-C--
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN-G--   81 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~-~--   81 (175)
                      +|+||+|||||||++++.++++++++ |++|+++ ++|++||||++..+...++.+++.   .++|+.||++|+.. +  
T Consensus         4 ~kli~~DlDGTLl~~~~~~~~~~~~a-i~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~---~~~i~~nGa~i~~~~~~~   79 (273)
T PRK00192          4 KLLVFTDLDGTLLDHHTYSYEPAKPA-LKALKEKGIPVIPCTSKTAAEVEVLRKELGLE---DPFIVENGAAIYIPKNYF   79 (273)
T ss_pred             ceEEEEcCcccCcCCCCcCcHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---CCEEEEcCcEEEeccccc
Confidence            79999999999999888899999999 9999999 999999999999998888877543   37899999999852 2  


Q ss_pred             ------------eEeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         82 ------------KLFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        82 ------------~~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                                  +.++...+    +.+.+.++++.+.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~  114 (273)
T PRK00192         80 PFQPDGERLKGDYWVIELGP----PYEELREILDEISDE  114 (273)
T ss_pred             ccCCccccccCCceEEEcCC----CHHHHHHHHHHHHHH
Confidence                        46777777    899999998876553

>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5

Probab=99.73  E-value=3.3e-17  Score=124.23  Aligned_cols=145  Identities=43%  Similarity=0.761  Sum_probs=110.7

Q ss_pred             HHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         29 LDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        29 ~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                      .+. |++|++++.++++||..+..+.+++....+...++|+.++||...|..|+.+..+.+.+.++++..+++++++.++
T Consensus         2 ~~~-L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~~   80 (220)
T PF03332_consen    2 AEL-LQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLRY   80 (220)
T ss_dssp             HHH-HHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHHH
Confidence            455 8899988999999999999999999522244567899999999999999988888888999999999999999998


Q ss_pred             cccccccccccceeeecccccccch--------------hhccHHHHH-HHHHHHHHhcCCCCCceeecc--eE-EecCC
Q psy16481        109 LSTVTLPFKRGNFIEFRTGLINSII--------------DHMGEDKIQ-TFINYCLQHLSTVTLPFKRGN--FI-EFRTG  170 (175)
Q Consensus       109 ~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~~~-~~~~~l~~~~~~~~~~~s~~~--~i-i~~~G  170 (175)
                      -..+.++...|+++|.|.++++++|              .|++...++ ++++.|++.||++.+..|.|+  .+ +.|+|
T Consensus        81 ~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~G  160 (220)
T PF03332_consen   81 ISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPKG  160 (220)
T ss_dssp             HHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEETT
T ss_pred             HHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccCC
Confidence            8777777889999999999988875              234555666 799999999999777666555  45 99999


Q ss_pred             cccC
Q psy16481        171 LINH  174 (175)
Q Consensus       171 v~K~  174 (175)
                      |+|.
T Consensus       161 wDKt  164 (220)
T PF03332_consen  161 WDKT  164 (220)
T ss_dssp             -SGG
T ss_pred             ccHH
Confidence            9995

4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.71  E-value=5.7e-17  Score=126.02  Aligned_cols=68  Identities=15%  Similarity=0.194  Sum_probs=57.7

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      +|++|||||||++++.+++.+ ++ ++ ++++ +.|++||||++.++.+.++.+++. ..+++|++||+.|+.
T Consensus         1 li~~DlDgTLl~~~~~~~~~~-~~-~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~-~~~~~I~~nGa~i~~   69 (236)
T TIGR02471         1 LIITDLDNTLLGDDEGLASFV-EL-LR-GSGDAVGFGIATGRSVESAKSRYAKLNLP-SPDVLIARVGTEIYY   69 (236)
T ss_pred             CeEEeccccccCCHHHHHHHH-HH-HH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC-CCCEEEECCCceEEe
Confidence            589999999999888898876 66 77 6777 999999999999999999876543 234699999999875

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>PLN02382 probable sucrose-phosphatase

Probab=99.70  E-value=2.8e-16  Score=131.37  Aligned_cols=79  Identities=14%  Similarity=0.065  Sum_probs=62.6

Q ss_pred             CCCcceEEEEecCCCccCC--CCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          2 TCRANTICLFDVDGTLTQP--RQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~--~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +..++-||++|||||||++  ++.+++.++.++++++.++ +.|++||||++..+.++.+.+++. ..+++|++||+.|+
T Consensus         5 ~~~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~-~p~~~I~~nGt~I~   83 (413)
T PLN02382          5 SGSPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLL-TPDITIMSVGTEIA   83 (413)
T ss_pred             cCCCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCC-CCCEEEEcCCcEEE
Confidence            3456789999999999998  4489988888834999998 999999999988877766555432 22368899999998


Q ss_pred             eCC
Q psy16481         79 KNG   81 (175)
Q Consensus        79 ~~~   81 (175)
                      ..+
T Consensus        84 ~~~   86 (413)
T PLN02382         84 YGE   86 (413)
T ss_pred             eCC
Confidence            644

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.69  E-value=5.8e-17  Score=128.29  Aligned_cols=70  Identities=16%  Similarity=0.121  Sum_probs=64.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      .|+||+|||||||++++.+++.++++ |++|+++ +.|++||||++.++..+.+.+++.   +++|++||+.|+.
T Consensus         1 ~KLIftDLDGTLLd~~~~~~~~a~~a-L~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~---~p~I~eNGA~I~~   71 (302)
T PRK12702          1 MRLVLSSLDGSLLDLEFNSYGAARQA-LAALERRSIPLVLYSLRTRAQLEHLCRQLRLE---HPFICEDGSAIYV   71 (302)
T ss_pred             CcEEEEeCCCCCcCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC---CeEEEeCCcEEEE
Confidence            48999999999999988899999999 9999999 999999999999998888887643   3899999999995

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.67  E-value=1.4e-15  Score=135.31  Aligned_cols=153  Identities=20%  Similarity=0.295  Sum_probs=97.4

Q ss_pred             CcceEEEEecCCCccCCC-----CCCCHHHHHHHHHhhCC-C-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          4 RANTICLFDVDGTLTQPR-----QKAQNETLDFLLKKLKP-L-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~-----~~i~~~~~~~~l~~l~~-~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      +++|+|++|+||||++..     ..++++++++ |++|.+ . +.|+++|||++..+.++++..+     .++|++||+.
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~-L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~-----l~liaenG~~  563 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDL-LRRLAADPNTDVAIISGRDRDTLERWFGDLP-----IHLVAEHGAW  563 (726)
T ss_pred             ccceEEEEecCccccCCCCCcccCCCCHHHHHH-HHHHHcCCCCeEEEEeCCCHHHHHHHhCCCC-----eEEEEeCCEE
Confidence            467999999999999832     3688999999 999999 4 9999999999999999998753     2699999999


Q ss_pred             eeeCCeEeeccchhhhhC---HHHHHHHHHHHHHhcccccccccccceeeecccccccc-----hhhccHHHHHHHHHHH
Q psy16481         77 AYKNGKLFEKKSIIDHMG---EDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSI-----IDHMGEDKIQTFINYC  148 (175)
Q Consensus        77 i~~~~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~l  148 (175)
                      ++..++.+.....   .+   .+.+.++++.+.+.        ..|.+++.+.....+.     +.+ ......++.+.+
T Consensus       564 i~~~~~~w~~~~~---~~~~w~~~v~~il~~~~~~--------~~gs~ie~k~~~l~~~~r~~d~~~-~~~~a~~l~~~l  631 (726)
T PRK14501        564 SRAPGGEWQLLEP---VATEWKDAVRPILEEFVDR--------TPGSFIEEKEASLAWHYRNADPEL-GEARANELILAL  631 (726)
T ss_pred             EeCCCCceEECCC---cchhHHHHHHHHHHHHHhc--------CCCcEEEEcceEEEEEccCCCHHH-HHHHHHHHHHHH
Confidence            9864443322111   02   23344444333322        2345555432221121     111 112233455666


Q ss_pred             HHhcCCCCC-ceeecceE-EecCCcccC
Q psy16481        149 LQHLSTVTL-PFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       149 ~~~~~~~~~-~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...+.+..+ ..+++.++ +.|+|+||.
T Consensus       632 ~~~~~~~~~~v~~g~~~veV~p~~vnKG  659 (726)
T PRK14501        632 SSLLSNAPLEVLRGNKVVEVRPAGVNKG  659 (726)
T ss_pred             HHHhcCCCeEEEECCeEEEEEECCCCHH
Confidence            555544223 34567778 999999995

>PLN03017 trehalose-phosphatase

Probab=99.62  E-value=1.4e-14  Score=118.29  Aligned_cols=70  Identities=23%  Similarity=0.261  Sum_probs=58.4

Q ss_pred             CcceEEEEecCCCcc---C-CCC-CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          4 RANTICLFDVDGTLT---Q-PRQ-KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         4 ~~~kli~~DlDGTLl---~-~~~-~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      .+..+||+|+||||+   + +++ .++++++++ |++|.+.+.|+|+|||++..+..+++..+     .+++++||+.+.
T Consensus       109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~a-L~~La~~~~vaIvSGR~~~~l~~~~~l~~-----l~l~g~hGa~i~  182 (366)
T PLN03017        109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRT-VKKLAKCFPTAIVTGRCIDKVYNFVKLAE-----LYYAGSHGMDIK  182 (366)
T ss_pred             CCCeEEEEecCCcCcCCcCCcccccCCHHHHHH-HHHHhcCCcEEEEeCCCHHHHHHhhcccC-----ceEEEcCCcEEe
Confidence            356899999999999   3 555 899999999 99999449999999999999988754321     378999999987


Q ss_pred             e
Q psy16481         79 K   79 (175)
Q Consensus        79 ~   79 (175)
                      .
T Consensus       183 ~  183 (366)
T PLN03017        183 G  183 (366)
T ss_pred             c
Confidence            4

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.62  E-value=9.7e-15  Score=131.07  Aligned_cols=159  Identities=15%  Similarity=0.148  Sum_probs=99.6

Q ss_pred             CcceEEEEecCCCccCCC---CCCCHHHHHHHHHhh-CCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          4 RANTICLFDVDGTLTQPR---QKAQNETLDFLLKKL-KPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~---~~i~~~~~~~~l~~l-~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      .++++|++|+||||++..   ..++++++++ |++| .+. +.|+|+|||++..+.++|+...   . .+++++||+.+.
T Consensus       594 ~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~-L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~---~-l~laaEHG~~ir  668 (854)
T PLN02205        594 TTTRAILLDYDGTLMPQASIDKSPSSKSIDI-LNTLCRDKNNMVFIVSARSRKTLADWFSPCE---K-LGIAAEHGYFLR  668 (854)
T ss_pred             hcCeEEEEecCCcccCCccccCCCCHHHHHH-HHHHHhcCCCEEEEEeCCCHHHHHHHhCCCC---C-eEEEEeCCEEEE
Confidence            467999999999999865   3788999999 9998 445 9999999999999999998741   1 268999999987


Q ss_pred             eCCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccc-----hhhccHHHHHHHHHHHHHhcC
Q psy16481         79 KNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSI-----IDHMGEDKIQTFINYCLQHLS  153 (175)
Q Consensus        79 ~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~  153 (175)
                      ..++..++... .. ....+++.+....+...    ...+|.++|.+.....+.     +++ ...+..++...+.+.+.
T Consensus       669 ~~~~~~w~~~~-~~-~~~~w~~~v~~i~~~y~----ertpGs~IE~K~~slv~HyR~adpd~-~~~qa~el~~~l~~~l~  741 (854)
T PLN02205        669 LKRDVEWETCV-PV-ADCSWKQIAEPVMQLYT----ETTDGSTIEDKETALVWCYEDADPDF-GSCQAKELLDHLESVLA  741 (854)
T ss_pred             eCCCceeeecc-hh-hhHHHHHHHHHHHHHHh----cCCCchhheecceEEEEehhhCChHH-hhhhhHHHHHHHHHHHh
Confidence            54443222111 00 11223333222222211    134677777654333322     111 11122355555555554


Q ss_pred             C-CCCceeecceE-EecCCcccC
Q psy16481        154 T-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       154 ~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      + .-.+.++..++ +.|+|+||.
T Consensus       742 ~~~~~v~~G~~vvEV~p~gvnKG  764 (854)
T PLN02205        742 NEPVTVKSGQNIVEVKPQGVSKG  764 (854)
T ss_pred             cCceEEEECCcEEEEEeCCCCHH
Confidence            3 22355677778 899999995

>TIGR00685 T6PP trehalose-phosphatase

Probab=99.58  E-value=6e-14  Score=109.77  Aligned_cols=156  Identities=18%  Similarity=0.086  Sum_probs=90.1

Q ss_pred             CcceEEEEecCCCccCC----C-CCCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          4 RANTICLFDVDGTLTQP----R-QKAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~----~-~~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      .+++++++|+||||.+.    + ..++++..++ |++|.+.  +.++|+|||++..+...+...+     .+++++||+.
T Consensus         1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~-L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~-----~~l~g~hG~~   74 (244)
T TIGR00685         1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTI-LQKLAARPHNAIWIISGRKFLEKWLGVKLPG-----LGLAGEHGCE   74 (244)
T ss_pred             CCcEEEEEecCccccCCcCCCcccCCCHHHHHH-HHHHHhCCCCeEEEEECCChhhccccCCCCc-----eeEEeecCEE
Confidence            36789999999999973    2 3688999999 9999887  7789999999887765443321     2589999999


Q ss_pred             eeeCCeEeeccchhhhhCH--HHHHHHHHHHHHhcccccccccccceeeecccccccch--hhccHHHHHHHHHHHHHhc
Q psy16481         77 AYKNGKLFEKKSIIDHMGE--DKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII--DHMGEDKIQTFINYCLQHL  152 (175)
Q Consensus        77 i~~~~~~i~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~  152 (175)
                      ++.+|+.......    +.  ..++++...+.++...     ..|.++|.+...+.+..  ...++....++.+.+.+..
T Consensus        75 ~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~-----~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~  145 (244)
T TIGR00685        75 MKDNGSCQDWVNL----TEKIPSWKVRANELREEITT-----RPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL  145 (244)
T ss_pred             EecCCCcceeeec----hhhhhhHHHHHHHHHHHHhc-----CCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh
Confidence            8754543211111    11  1233333333333221     25777776543333321  0111222223333333333


Q ss_pred             CCCCCce-eecceE-EecCCcccC
Q psy16481        153 STVTLPF-KRGNFI-EFRTGLINH  174 (175)
Q Consensus       153 ~~~~~~~-s~~~~i-i~~~Gv~K~  174 (175)
                      +...+.. ++..++ +.|+|+||.
T Consensus       146 ~~~~~~v~~g~~~~e~~p~~~~Kg  169 (244)
T TIGR00685       146 SFTDLEVMDGKAVVELKPRFVNKG  169 (244)
T ss_pred             cCCCEEEEECCeEEEEeeCCCCHH
Confidence            3222323 444556 889999994

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>smart00775 LNS2 LNS2 domain

Probab=99.56  E-value=7.5e-15  Score=107.67  Aligned_cols=97  Identities=10%  Similarity=0.127  Sum_probs=73.9

Q ss_pred             EEEEecCCCccCCC-----------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHH---HHhcC-----CCcccccc
Q psy16481          8 ICLFDVDGTLTQPR-----------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVA---EQLGG-----EKVLEQFD   67 (175)
Q Consensus         8 li~~DlDGTLl~~~-----------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~---~~~~~-----~~~~~~~~   67 (175)
                      +|++||||||++++           +.+++.+.++ +++++++ ++|++||||++..+.   +++..     .+++  ..
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a-~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp--~g   77 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKL-YRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP--HG   77 (157)
T ss_pred             CEEEecCCCCcccccccccccccccCcCCHHHHHH-HHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC--Cc
Confidence            58999999999998           7899999999 9999999 999999999999873   55544     1122  23


Q ss_pred             eEEecCCceeee-CCeEeeccchhhhhCHHHHHHHHHHHHHhc
Q psy16481         68 FVFPENGLVAYK-NGKLFEKKSIIDHMGEDKIQTFINYCLQHL  109 (175)
Q Consensus        68 ~~i~~NGa~i~~-~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~  109 (175)
                      ++++.||+.+.. .+++++..+.  ....+.++.+.+.+.+..
T Consensus        78 ~li~~~g~~~~~~~~e~i~~~~~--~~K~~~l~~i~~~~~~~~  118 (157)
T smart00775       78 PVLLSPDRLFAALHREVISKKPE--VFKIACLRDIKSLFPPQG  118 (157)
T ss_pred             eEEEcCCcchhhhhcccccCCHH--HHHHHHHHHHHHhcCCCC
Confidence            789999999974 5666666551  115667777776665433

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=99.49  E-value=1.1e-12  Score=103.37  Aligned_cols=153  Identities=17%  Similarity=0.227  Sum_probs=96.9

Q ss_pred             cceEEEEecCCCccCC----C-CCCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCcee
Q psy16481          5 ANTICLFDVDGTLTQP----R-QKAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVA   77 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~----~-~~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i   77 (175)
                      +++++++|+||||.+.    . -.++++.++. |++|..+  ..++|.|||+...+..+++..++     +++|+||+.+
T Consensus        17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~l-L~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i-----~l~aehGa~~   90 (266)
T COG1877          17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSL-LQDLASDPRNVVAIISGRSLAELERLFGVPGI-----GLIAEHGAEV   90 (266)
T ss_pred             cceEEEEeccccccccccCccccCCCHHHHHH-HHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc-----cEEEecceEE
Confidence            6799999999999982    2 3778899999 9999998  78999999999999999885432     6899999999


Q ss_pred             e-eCCeEeeccchhhhhCHHHHH---HHHHHHHHhcccccccccccceeeecccccccchh-hccHHHHH-HHHHHHHHh
Q psy16481         78 Y-KNGKLFEKKSIIDHMGEDKIQ---TFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIID-HMGEDKIQ-TFINYCLQH  151 (175)
Q Consensus        78 ~-~~~~~i~~~~l~~~l~~~~~~---~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~  151 (175)
                      . .+|+......     ..+.+.   ++.+..+.+     +....|.|++.+.-++.+... ..+.+... .+.......
T Consensus        91 r~~~g~~~~~~~-----~~~~~~~~~~v~~~l~~~-----v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~  160 (266)
T COG1877          91 RDPNGKWWINLA-----EEADLRWLKEVAAILEYY-----VERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLI  160 (266)
T ss_pred             ecCCCCeeEecC-----HHHHhhHHHHHHHHHHHH-----hhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhcc
Confidence            6 4776643221     222222   444443333     224568888876544443221 11122221 222322222


Q ss_pred             cCCCCCceeecceE--EecCCcccC
Q psy16481        152 LSTVTLPFKRGNFI--EFRTGLINH  174 (175)
Q Consensus       152 ~~~~~~~~s~~~~i--i~~~Gv~K~  174 (175)
                      -. ..+....++.+  +.|.|+||.
T Consensus       161 ~~-~~~~v~~gk~vVEvrp~~~~KG  184 (266)
T COG1877         161 NE-LKLRVTPGKMVVELRPPGVSKG  184 (266)
T ss_pred             cc-ccEEEEeCceEEEEeeCCcchH
Confidence            22 21444556665  669999984

>PLN02151 trehalose-phosphatase

Probab=99.49  E-value=1.1e-12  Score=106.89  Aligned_cols=69  Identities=23%  Similarity=0.267  Sum_probs=59.3

Q ss_pred             cceEEEEecCCCcc----CCCC-CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          5 ANTICLFDVDGTLT----QPRQ-KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         5 ~~kli~~DlDGTLl----~~~~-~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      +..++++|+||||+    +++. .++++++++ |++|.+...++|+|||+...+..+++..+     .++++++|+.+..
T Consensus        97 ~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~a-L~~La~~~~vaIvSGR~~~~l~~~~~~~~-----l~laGsHG~e~~~  170 (354)
T PLN02151         97 KQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNT-VRKLAKCFPTAIVSGRCREKVSSFVKLTE-----LYYAGSHGMDIKG  170 (354)
T ss_pred             CceEEEEecCccCCCCCCCcccccCCHHHHHH-HHHHhcCCCEEEEECCCHHHHHHHcCCcc-----ceEEEeCCceeec
Confidence            56899999999999    5666 899999999 99999558899999999999999887543     2688999999863

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=99.41  E-value=4.3e-13  Score=105.21  Aligned_cols=73  Identities=21%  Similarity=0.265  Sum_probs=50.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      +.+|+++|+||||++.+..-..+..+. ++..... +.|+++|||+..++...+...+++ ..+++||.+|+.|+.
T Consensus         1 ~~~ll~sDlD~Tl~~~~~~~~~~l~~~-l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~-~Pd~~I~svGt~I~~   74 (247)
T PF05116_consen    1 PPRLLASDLDGTLIDGDDEALARLEEL-LEQQARPEILFVYVTGRSLESVLRLLREYNLP-QPDYIITSVGTEIYY   74 (247)
T ss_dssp             -SEEEEEETBTTTBHCHHHHHHHHHHH-HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-E-E-SEEEETTTTEEEE
T ss_pred             CCEEEEEECCCCCcCCCHHHHHHHHHH-HHHhhCCCceEEEECCCCHHHHHHHHHhCCCC-CCCEEEecCCeEEEE
Confidence            368999999999993333222333333 5523344 999999999999998888765543 346899999999997

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.41  E-value=9e-12  Score=111.77  Aligned_cols=158  Identities=18%  Similarity=0.230  Sum_probs=99.6

Q ss_pred             CcceEEEEecCCCccCCCC--------CCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEecC
Q psy16481          4 RANTICLFDVDGTLTQPRQ--------KAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPEN   73 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~N   73 (175)
                      .+.+++++|+||||.+...        .++++..++ |++|.+.  ..++|+|||+...+..+++..++     +++++|
T Consensus       505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~-L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l-----~l~aeH  578 (797)
T PLN03063        505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKET-LKALCSDPKTTVVVLSRSGKDILDKNFGEYNI-----WLAAEN  578 (797)
T ss_pred             ccCeEEEEecCccccCCCCCccccccCCCCHHHHHH-HHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCC-----cEEEeC
Confidence            3568999999999997422        478899999 9999986  99999999999999999987432     689999


Q ss_pred             Cceeee-CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch-hhc---cHHHHHHHHHHH
Q psy16481         74 GLVAYK-NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII-DHM---GEDKIQTFINYC  148 (175)
Q Consensus        74 Ga~i~~-~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~---~~~~~~~~~~~l  148 (175)
                      |+.+.. +++...  .+...++.++...+...++.+-.     ...|.++|.+.....+.. ..+   +..+..++.+.+
T Consensus       579 G~~~r~~~~~w~~--~~~~~~~~~w~~~v~~~l~~~~~-----rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l  651 (797)
T PLN03063        579 GMFLRHTSGEWVT--TMPEHMNLDWVDGVKNVFKYFTD-----RTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHL  651 (797)
T ss_pred             CEEEecCCCceee--ccccccChhHHHHHHHHHHHHHH-----hCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHH
Confidence            999864 333211  11111133333334333333211     245888887654444422 111   123444666666


Q ss_pred             HHhc-CCCCCceeecceE--EecCCcccC
Q psy16481        149 LQHL-STVTLPFKRGNFI--EFRTGLINH  174 (175)
Q Consensus       149 ~~~~-~~~~~~~s~~~~i--i~~~Gv~K~  174 (175)
                      .+.. +...+....|+.+  +.|.|+||.
T Consensus       652 ~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG  680 (797)
T PLN03063        652 WAGPISNASVDVVRGQKSVEVHAIGVTKG  680 (797)
T ss_pred             HHhhccCCCcEEEECCeEEEEEcCCCChH
Confidence            4432 3333444555665  679999994

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=99.40  E-value=1.3e-12  Score=101.67  Aligned_cols=153  Identities=18%  Similarity=0.123  Sum_probs=75.6

Q ss_pred             EEecCCCccCCCC-----CCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481         10 LFDVDGTLTQPRQ-----KAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus        10 ~~DlDGTLl~~~~-----~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      ++|+||||.+...     .++++.+++ |++|.+.  ..++|+|||+...+..+....+     ..++++||+.+...+.
T Consensus         1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~-L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~-----i~l~gehG~e~~~~~~   74 (235)
T PF02358_consen    1 FLDYDGTLAPIVDDPDAAVPPPELREL-LRALAADPNNTVAIVSGRSLDDLERFGGIPN-----IGLAGEHGAEIRRPGG   74 (235)
T ss_dssp             EEE-TTTSS---S-GGG----HHHHHH-HHHHHHHSE--EEEE-SS-HHHHHHH-S-SS------EEEEGGGTEEEETTE
T ss_pred             CcccCCccCCCCCCccccCCCHHHHHH-HHHHhccCCCEEEEEEeCCHHHhHHhcCCCC-----ceEEEEeeEEeccCcc
Confidence            6899999998332     788999999 9999997  6899999999999655544422     2689999999997655


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccchhhc----cHHHHHHHHHHHHHhcCC-CCC
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHM----GEDKIQTFINYCLQHLST-VTL  157 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~-~~~  157 (175)
                      ....... .....++...+.+.++.+-.     ...|.++|.+...+.+...-.    ......++.+.+.+.... ..+
T Consensus        75 ~~~~~~~-~~~~~~~~~~~~~~l~~~~~-----~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~  148 (235)
T PF02358_consen   75 SEWTNLP-ADEDLEWKDEVREILEYFAE-----RTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGL  148 (235)
T ss_dssp             -EEE-TT-GGGGHHHHHHHHHHHTTHHH-----HSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-
T ss_pred             ccccccc-cccchHHHHHHHHHHHHHHh-----hccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCE
Confidence            3222111 11133444555444433211     245777776654333321100    112334444444443322 233


Q ss_pred             ceeecc-eE-EecCCcccC
Q psy16481        158 PFKRGN-FI-EFRTGLINH  174 (175)
Q Consensus       158 ~~s~~~-~i-i~~~Gv~K~  174 (175)
                      ....++ .+ +.|+|++|.
T Consensus       149 ~v~~g~~~vEvrp~~~~KG  167 (235)
T PF02358_consen  149 EVVPGKKVVEVRPPGVNKG  167 (235)
T ss_dssp             EEEE-SSEEEEE-TT--HH
T ss_pred             EEEECCCEEEEEeCCCChH
Confidence            344444 45 779999983

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>PLN02580 trehalose-phosphatase

Probab=99.40  E-value=8.1e-12  Score=102.97  Aligned_cols=68  Identities=24%  Similarity=0.314  Sum_probs=58.2

Q ss_pred             cceEEEEecCCCccC-----CCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          5 ANTICLFDVDGTLTQ-----PRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         5 ~~kli~~DlDGTLl~-----~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +..++++|+||||.+     +.-.++++++++ |++|.+...++|+|||+...+..+++..++     ++++++|+.+.
T Consensus       118 k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~a-L~~La~~~~VAIVSGR~~~~L~~~l~~~~l-----~laGsHG~e~~  190 (384)
T PLN02580        118 KKIALFLDYDGTLSPIVDDPDRALMSDAMRSA-VKNVAKYFPTAIISGRSRDKVYELVGLTEL-----YYAGSHGMDIM  190 (384)
T ss_pred             CCeEEEEecCCccCCCCCCcccccCCHHHHHH-HHHHhhCCCEEEEeCCCHHHHHHHhCCCCc-----cEEEeCCceee
Confidence            568999999999976     223889999999 999998877999999999999999876432     68899999876

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.39  E-value=1.1e-11  Score=111.68  Aligned_cols=157  Identities=17%  Similarity=0.244  Sum_probs=99.0

Q ss_pred             CcceEEEEecCCCccCCC--------------CCCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccc
Q psy16481          4 RANTICLFDVDGTLTQPR--------------QKAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFD   67 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~--------------~~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~   67 (175)
                      .+.+++++|+||||.+..              -.++++..++ |++|.+.  ..++|+|||+...+..+++..++     
T Consensus       589 a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~-L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L-----  662 (934)
T PLN03064        589 SNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEP-LRALCSDPKTTIVVLSGSDRSVLDENFGEFDM-----  662 (934)
T ss_pred             ccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHH-HHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc-----
Confidence            356899999999999732              1377889999 9999986  99999999999999999988532     


Q ss_pred             eEEecCCceeee-CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch-----hhccHHHH
Q psy16481         68 FVFPENGLVAYK-NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII-----DHMGEDKI  141 (175)
Q Consensus        68 ~~i~~NGa~i~~-~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~  141 (175)
                      +++++||+.+.. +++...  .+...++.++...+...++.+-.     ...|.++|.+.....|..     ++ +..+.
T Consensus       663 ~LaAEHG~~~R~~~~~w~~--~~~~~~~~~W~~~v~~ile~~~e-----RtPGS~IE~K~~SLawHYR~ADpe~-g~~qA  734 (934)
T PLN03064        663 WLAAENGMFLRHTKGEWMT--TMPEHLNMDWVDSVKHVFEYFTE-----RTPRSHFETRETSLVWNYKYADVEF-GRLQA  734 (934)
T ss_pred             eEEeeCCeEEecCCCccee--ccccccchHHHHHHHHHHHHHHh-----cCCCcEEEEcCcEEEEEecCCChhh-HHHHH
Confidence            689999999864 333221  11111133333334333333211     345888887654444432     11 22334


Q ss_pred             HHHHHHHHHh-cCCCCCceeecceE--EecCCcccC
Q psy16481        142 QTFINYCLQH-LSTVTLPFKRGNFI--EFRTGLINH  174 (175)
Q Consensus       142 ~~~~~~l~~~-~~~~~~~~s~~~~i--i~~~Gv~K~  174 (175)
                      +++.+.+.+. +.+..+....|+.+  +.|.|+||.
T Consensus       735 ~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG  770 (934)
T PLN03064        735 RDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKG  770 (934)
T ss_pred             HHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHH
Confidence            5666666332 22333434455555  679999994

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=99.32  E-value=7.9e-12  Score=88.14  Aligned_cols=72  Identities=21%  Similarity=0.212  Sum_probs=56.1

Q ss_pred             eEEEEecCCCccCCCC------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          7 TICLFDVDGTLTQPRQ------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         7 kli~~DlDGTLl~~~~------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      |+|++|+||||+++++      .+.++++++ |++++++ +.|++||||+.....                 .||+.   
T Consensus         2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~-L~~l~~~G~~IiiaTGR~~~~~~-----------------~n~~~---   60 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGDYANVAPILAVIEK-LRHYKALGFEIVISSSRNMRTYE-----------------GNVGK---   60 (126)
T ss_pred             CEEEEeCCCCcccCCCCcccccccCHHHHHH-HHHHHHCCCEEEEECCCCchhhh-----------------ccccc---
Confidence            7999999999998642      366888999 9999888 999999999986542                 36665   


Q ss_pred             CCeEeeccchhhhhCHHHHHHHHHHHHHhcccc
Q psy16481         80 NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTV  112 (175)
Q Consensus        80 ~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~  112 (175)
                               |    +.+.+..+.+++.+++..+
T Consensus        61 ---------i----~~~~~~~t~~wL~k~~ipY   80 (126)
T TIGR01689        61 ---------I----NIHTLPIIILWLNQHNVPY   80 (126)
T ss_pred             ---------c----chhhHHHHHHHHHHcCCCC
Confidence                     2    5556677778888887654

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01684 viral_ppase viral phosphatase

Probab=99.27  E-value=1.2e-11  Score=98.14  Aligned_cols=73  Identities=26%  Similarity=0.322  Sum_probs=61.6

Q ss_pred             CcceEEEEecCCCccCCCCCC---CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          4 RANTICLFDVDGTLTQPRQKA---QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i---~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      ...|+|||||||||+++++++   +|.+.++ |++|+++ +.++|||+++...+...++..|+...++ .|..||....
T Consensus       124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~Ea-L~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd-vIIs~Gdv~~  200 (301)
T TIGR01684       124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDS-LTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD-IIISGGHKAE  200 (301)
T ss_pred             ccceEEEEecCCCCcCCCCccccCCHHHHHH-HHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC-EEEECCcccc
Confidence            356899999999999998876   6999999 9999999 9999999999998888888887755454 4455887765

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=99.12  E-value=1.6e-10  Score=91.73  Aligned_cols=74  Identities=24%  Similarity=0.251  Sum_probs=60.8

Q ss_pred             CcceEEEEecCCCccCCCCCC---CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          4 RANTICLFDVDGTLTQPRQKA---QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i---~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      ...|+|+|||||||+++++++   +|.+.++ |++|+++ +.++|+|+.+...+...++..++...++. |.++|+...+
T Consensus       126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~Et-L~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDv-II~~g~i~~k  203 (303)
T PHA03398        126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDS-LDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDI-IICGGRKAGE  203 (303)
T ss_pred             eeccEEEEecCCCccCCCCccccCChhHHHH-HHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccE-EEECCCcccc
Confidence            356899999999999999888   8999999 9999999 99999998877777788887776544443 4457777664

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.00  E-value=3.4e-10  Score=88.88  Aligned_cols=71  Identities=23%  Similarity=0.286  Sum_probs=59.4

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +|.++||+||||++.++.++ .+.++ |++|+++ ++|+++||   |++..+...+..+|+....+.+++.||+.+.
T Consensus         1 ~~~~~~D~DGtl~~~~~~i~-~a~~~-l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~   75 (249)
T TIGR01457         1 YKGYLIDLDGTMYKGKERIP-EAETF-VHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD   75 (249)
T ss_pred             CCEEEEeCCCceEcCCeeCc-CHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence            47899999999999988776 78999 9999999 99999995   8899988888887765444458888887643

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.83  E-value=8e-09  Score=78.49  Aligned_cols=70  Identities=21%  Similarity=0.167  Sum_probs=56.8

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      -.++||+|+||||+++.-.-.| .... +.+|++. +.+++||......+..+-+.+++..  -++|++||+.|+
T Consensus         6 ~~~lIFtDlD~TLl~~~ye~~p-A~pv-~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~--~p~iaEnG~aI~   76 (274)
T COG3769           6 MPLLIFTDLDGTLLPHSYEWQP-AAPV-LLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG--LPLIAENGAAIY   76 (274)
T ss_pred             cceEEEEcccCcccCCCCCCCc-cchH-HHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC--CceeecCCceEE
Confidence            4689999999999995444433 3566 9999999 9999999999999877777766542  379999999999

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=98.78  E-value=2.3e-09  Score=80.42  Aligned_cols=58  Identities=16%  Similarity=0.235  Sum_probs=48.5

Q ss_pred             CcceEEEEecCCCccCC-------CCCCCHHHH---HHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQP-------RQKAQNETL---DFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~-------~~~i~~~~~---~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+|+|++|+||||++.       +..+++.+.   .+ ++.|+++ +.++|+|||+...+...++.+++
T Consensus        19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~-i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl   87 (183)
T PRK09484         19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYG-IRCLLTSGIEVAIITGRKSKLVEDRMTTLGI   87 (183)
T ss_pred             hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHH-HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCC
Confidence            35899999999999986       555655555   78 9999988 99999999999998888887653

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=98.74  E-value=1.2e-08  Score=71.10  Aligned_cols=70  Identities=31%  Similarity=0.398  Sum_probs=55.4

Q ss_pred             EEEEecCCCccCCCC--------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          8 ICLFDVDGTLTQPRQ--------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         8 li~~DlDGTLl~~~~--------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +++||+||||.+.+.        .+.+...+. |++|+++ +.++++|||....+...++..++......+++.++....
T Consensus         1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   79 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEA-LKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY   79 (139)
T ss_pred             CeEEccCCceEccCccccccccCCcCcCHHHH-HHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence            479999999999875        888999999 9999999 999999999999988888765542223346665655443

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.70  E-value=1.2e-08  Score=80.59  Aligned_cols=56  Identities=18%  Similarity=0.216  Sum_probs=46.7

Q ss_pred             ceEEEEecCCCccCCCC---CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH---HHHHhcCCCc
Q psy16481          6 NTICLFDVDGTLTQPRQ---KAQNETLDFLLKKLKPL-SHLAIVSGSDMNK---VAEQLGGEKV   62 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~---~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~---~~~~~~~~~~   62 (175)
                      +|+|+||+||||++.++   .+.+.+.++ |++|+++ ++++++|||+...   +...+..+|+
T Consensus         1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~a-l~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~   63 (257)
T TIGR01458         1 VKGVLLDISGVLYISDAKSGVAVPGSQEA-VKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF   63 (257)
T ss_pred             CCEEEEeCCCeEEeCCCcccCcCCCHHHH-HHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence            47999999999999876   377899999 9999999 9999999987775   5555655554

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PLN02645 phosphoglycolate phosphatase

Probab=98.63  E-value=4.3e-08  Score=79.40  Aligned_cols=57  Identities=14%  Similarity=0.264  Sum_probs=46.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHH---HHHHHhcCCCcc
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMN---KVAEQLGGEKVL   63 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~---~~~~~~~~~~~~   63 (175)
                      ++|+|+||+||||++.++.+ +...++ |++|+++ ++|+++|+|+..   .+.+.+..+|+.
T Consensus        27 ~~~~~~~D~DGtl~~~~~~~-~ga~e~-l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~   87 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDKLI-EGVPET-LDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN   87 (311)
T ss_pred             hCCEEEEeCcCCeEeCCccC-cCHHHH-HHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence            68999999999999988655 777999 9999999 999999999944   444455566653

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=98.59  E-value=5.4e-08  Score=68.90  Aligned_cols=53  Identities=30%  Similarity=0.220  Sum_probs=41.7

Q ss_pred             eEEEEecCCCccCCCC---C---------CCHHHHHHHHHhhCCC-eEEEEEcCC-CHHHHHHHhcCC
Q psy16481          7 TICLFDVDGTLTQPRQ---K---------AQNETLDFLLKKLKPL-SHLAIVSGS-DMNKVAEQLGGE   60 (175)
Q Consensus         7 kli~~DlDGTLl~~~~---~---------i~~~~~~~~l~~l~~~-i~~~iaTGR-~~~~~~~~~~~~   60 (175)
                      |+|++||||||++...   .         +-+...+. |+.|+++ +++++||++ +.......++..
T Consensus         1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~-L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~   67 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDK-LQTLKKNGFLLALASYNDDPHVAYELLKIF   67 (128)
T ss_pred             CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHH-HHHHHHCCeEEEEEeCCCCHHHHHHHHHhc
Confidence            7899999999999842   1         35688888 9999998 999999999 665555555543

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK10444 UMP phosphatase; Provisional

Probab=98.58  E-value=2.9e-08  Score=77.95  Aligned_cols=55  Identities=18%  Similarity=0.250  Sum_probs=46.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH---HHHhcCCCc
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV---AEQLGGEKV   62 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~---~~~~~~~~~   62 (175)
                      +|+|+||+||||++.+ ++.|.+.++ |++|+++ .+|+++|||+....   .+.+..+|+
T Consensus         1 ~~~v~~DlDGtL~~~~-~~~p~a~~~-l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~   59 (248)
T PRK10444          1 IKNVICDIDGVLMHDN-VAVPGAAEF-LHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV   59 (248)
T ss_pred             CcEEEEeCCCceEeCC-eeCccHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence            5899999999999988 577889999 9999999 99999999998754   445555555

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=98.56  E-value=1e-07  Score=75.99  Aligned_cols=55  Identities=16%  Similarity=0.204  Sum_probs=44.4

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHH---HHHHHhcCCCc
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMN---KVAEQLGGEKV   62 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~---~~~~~~~~~~~   62 (175)
                      +|+|+||+||||++.++.++. +.++ |++|+++ ++|+++|||+..   .+...+..+|+
T Consensus         2 ~~~~~~D~DGtl~~~~~~~~g-a~e~-l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~   60 (279)
T TIGR01452         2 AQGFIFDCDGVLWLGERVVPG-APEL-LDRLARAGKAALFVTNNSTKSRAEYALKFARLGF   60 (279)
T ss_pred             ccEEEEeCCCceEcCCeeCcC-HHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence            689999999999998776665 8999 9999999 999999998754   34445555554

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>KOG1050|consensus

Probab=98.55  E-value=6.8e-07  Score=79.38  Aligned_cols=152  Identities=20%  Similarity=0.189  Sum_probs=94.3

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNG   81 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~   81 (175)
                      +++++|.+|+|||+..+....   +... |+.|...  ..+.|+|||....+...+...    ...+++++||+.+...+
T Consensus       501 s~~rli~ldyd~t~~~~~~~~---~~~~-l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~----~~lgl~aEhG~f~r~~~  572 (732)
T KOG1050|consen  501 SKKRLILLDYDLTLIPPRSIK---AISI-LKDLCSDPKNIVYIVSGRGRSVLEKWFFGC----KNLGLAAEHGYFVRIPG  572 (732)
T ss_pred             ccceEEEecccccccCCCCch---HHHH-HHHHhcCCCCeEEEEEccCchhhhhhcccc----ccceeecccCceeccCC
Confidence            478999999999999876533   6676 9999886  889999999999887666432    11378999999998655


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccchh-hc---cHHHHHHHHHHHHHhcCCCCC
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIID-HM---GEDKIQTFINYCLQHLSTVTL  157 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~~~~~~~l~~~~~~~~~  157 (175)
                      .  ++..+   .+-++.+.+ +...++...    ..+|.|++.+.....|... .+   +.-+++++.+.+..  .+..+
T Consensus       573 ~--w~~~~---~~~~w~~~v-~~i~~~~~e----rt~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~  640 (732)
T KOG1050|consen  573 K--WETCV---LDLDWKDLV-KDIFQYYTE----RTPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPV  640 (732)
T ss_pred             c--eeeec---ccccHHHHH-HHHHHHHHh----cCCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCe
Confidence            5  32222   133333333 222222221    3568888876554444321 11   23344555666555  34444


Q ss_pred             ceeecceE--EecCCcccCC
Q psy16481        158 PFKRGNFI--EFRTGLINHL  175 (175)
Q Consensus       158 ~~s~~~~i--i~~~Gv~K~~  175 (175)
                      ....++.+  +-|.|+||.+
T Consensus       641 ~v~~g~~~Vev~~~gvsk~~  660 (732)
T KOG1050|consen  641 EVVRGKHIVEVRPQGVSKGL  660 (732)
T ss_pred             EEEecCceEEEcccccchHH
Confidence            44555554  5699999853

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=98.52  E-value=5.8e-08  Score=70.86  Aligned_cols=54  Identities=19%  Similarity=0.257  Sum_probs=42.8

Q ss_pred             ceEEEEecCCCccCCCC-------C-----CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          6 NTICLFDVDGTLTQPRQ-------K-----AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~-------~-----i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +|+|+||+||||++...       .     +.+.  .+ |++|+++ ++++|+||++...+...++.+++
T Consensus         1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~-i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi   67 (154)
T TIGR01670         1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YG-IRCALKSGIEVAIITGRKAKLVEDRCKTLGI   67 (154)
T ss_pred             CeEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HH-HHHHHHCCCEEEEEECCCCHHHHHHHHHcCC
Confidence            58999999999998321       1     2222  37 9999999 99999999999988888877654

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=98.31  E-value=4.4e-07  Score=64.10  Aligned_cols=55  Identities=31%  Similarity=0.355  Sum_probs=45.2

Q ss_pred             eEEEEecCCCccCC--------CCCCCHHHHHHHHHhhCCC-eEEEEEcCCC--------HHHHHHHhcCCCc
Q psy16481          7 TICLFDVDGTLTQP--------RQKAQNETLDFLLKKLKPL-SHLAIVSGSD--------MNKVAEQLGGEKV   62 (175)
Q Consensus         7 kli~~DlDGTLl~~--------~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~--------~~~~~~~~~~~~~   62 (175)
                      |+++||+||||++.        ..++.+...++ |++|+++ +.++++|+++        ...+...++.+++
T Consensus         1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~-l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l   72 (132)
T TIGR01662         1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDA-LAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV   72 (132)
T ss_pred             CEEEEeCCCceecCCCCCCCHHHheeCCCHHHH-HHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence            68999999999962        13677888999 9999998 9999999998        6667777776554

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=98.29  E-value=1.6e-06  Score=64.13  Aligned_cols=45  Identities=24%  Similarity=0.324  Sum_probs=35.9

Q ss_pred             cceEEEEecCCCccCCCCC------------CCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          5 ANTICLFDVDGTLTQPRQK------------AQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~------------i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      +.|++++|+||||+...+.            +-+...++ |++|+++ ++++|+|..+.
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~-L~~Lk~~G~~l~I~TN~~~   69 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAK-LQELDDEGYKIVIFTNQSG   69 (166)
T ss_pred             cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHH-HHHHHHCCCEEEEEeCCcc
Confidence            3589999999999985442            23678888 9999998 99999996543

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=98.28  E-value=1e-05  Score=74.34  Aligned_cols=65  Identities=11%  Similarity=0.142  Sum_probs=47.4

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhhC----CC-eEEEEEcCCCHHHHHHHhcCCCcc-cccceEEecCCceeee
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKLK----PL-SHLAIVSGSDMNKVAEQLGGEKVL-EQFDFVFPENGLVAYK   79 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l~----~~-i~~~iaTGR~~~~~~~~~~~~~~~-~~~~~~i~~NGa~i~~   79 (175)
                      ||+|+|+| +.    ..+..++. ++.++    .. +.|+++|||++..+...+...+++ ..+|.+||.-|+.||.
T Consensus       775 ia~D~d~~-~~----~~~~l~~~-~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy  845 (1050)
T TIGR02468       775 IAVDCYDD-KD----LLQIIKNI-FEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYY  845 (1050)
T ss_pred             EEeccCCC-CC----hHHHHHHH-HHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceec
Confidence            44999999 22    22222232 55554    34 999999999999999988776664 2577899999999986

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.07  E-value=3e-06  Score=65.99  Aligned_cols=52  Identities=23%  Similarity=0.351  Sum_probs=44.0

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcC-CCc
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGG-EKV   62 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~-~~~   62 (175)
                      ++||+||||++.++.++ .+.++ |+.++++ +++.+.|   ||+...+.+.+.. .++
T Consensus         1 ~lfD~DGvL~~~~~~~~-~a~e~-i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~   57 (236)
T TIGR01460         1 FLFDIDGVLWLGHKPIP-GAAEA-LNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV   57 (236)
T ss_pred             CEEeCcCccCcCCccCc-CHHHH-HHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence            57999999999987766 88999 9999998 9999998   8999988776665 444

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.05  E-value=5.2e-06  Score=56.38  Aligned_cols=52  Identities=19%  Similarity=0.335  Sum_probs=39.6

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCC---HHHHHHHhcCCCc
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSD---MNKVAEQLGGEKV   62 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~---~~~~~~~~~~~~~   62 (175)
                      ++||+||||.+.+..++ ...++ |++|+++ .+++++|-++   ...+.+.+..+|+
T Consensus         1 ~l~D~dGvl~~g~~~ip-ga~e~-l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi   56 (101)
T PF13344_consen    1 FLFDLDGVLYNGNEPIP-GAVEA-LDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI   56 (101)
T ss_dssp             EEEESTTTSEETTEE-T-THHHH-HHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred             CEEeCccEeEeCCCcCc-CHHHH-HHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence            68999999999776654 66899 9999999 9999998554   4456666666654

...

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=97.98  E-value=1.8e-05  Score=61.73  Aligned_cols=55  Identities=13%  Similarity=0.105  Sum_probs=40.7

Q ss_pred             EEEEecCCCccCCCC------C-CCHH---------------------------HHHHHHHhhCCC-eEEEEEcCC----
Q psy16481          8 ICLFDVDGTLTQPRQ------K-AQNE---------------------------TLDFLLKKLKPL-SHLAIVSGS----   48 (175)
Q Consensus         8 li~~DlDGTLl~~~~------~-i~~~---------------------------~~~~~l~~l~~~-i~~~iaTGR----   48 (175)
                      .|.|||||||+++..      + .+++                           ..+. |+.++++ ++++++|+|    
T Consensus        65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~el-L~~l~~~G~~i~iVTnr~~~k  143 (237)
T TIGR01672        65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQL-IDMHQRRGDAIFFVTGRTPGK  143 (237)
T ss_pred             EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHH-HHHHHHCCCEEEEEeCCCCCc
Confidence            899999999999754      2 3442                           4566 8899999 999999999    


Q ss_pred             CHHHHHHHhcCCCcc
Q psy16481         49 DMNKVAEQLGGEKVL   63 (175)
Q Consensus        49 ~~~~~~~~~~~~~~~   63 (175)
                      .-..+..+++.+|++
T Consensus       144 ~~~~a~~ll~~lGi~  158 (237)
T TIGR01672       144 TDTVSKTLAKNFHIP  158 (237)
T ss_pred             CHHHHHHHHHHhCCc
Confidence            444555666666553

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=97.91  E-value=2e-05  Score=61.52  Aligned_cols=66  Identities=15%  Similarity=0.178  Sum_probs=48.6

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH--HHHHhcCCCccc-ccceEEe
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNK--VAEQLGGEKVLE-QFDFVFP   71 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~--~~~~~~~~~~~~-~~~~~i~   71 (175)
                      ..+++++||+||||.+..+ +-|...++ |++|+++ ++++++|..+...  +.+.+..+++.. .++.+++
T Consensus         6 ~~~~~~~~D~dG~l~~~~~-~~pga~e~-L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~   75 (242)
T TIGR01459         6 NDYDVFLLDLWGVIIDGNH-TYPGAVQN-LNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIIS   75 (242)
T ss_pred             hcCCEEEEecccccccCCc-cCccHHHH-HHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEc
Confidence            4678999999999998765 46788999 9999998 9999987755443  335666666543 3444444

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=97.89  E-value=1.9e-05  Score=57.00  Aligned_cols=42  Identities=14%  Similarity=0.275  Sum_probs=35.9

Q ss_pred             eEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          7 TICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         7 kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      +.++||+||||.+...          ++-+...++ |+.|+++ ++++|+|..+
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~-l~~Lk~~g~~~~I~Sn~~   53 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPA-LLTLRAAGYTVVVVTNQS   53 (147)
T ss_pred             CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHH-HHHHHHCCCEEEEEeCCC
Confidence            5789999999999763          346788898 9999999 9999999865

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=97.85  E-value=3.8e-05  Score=56.87  Aligned_cols=54  Identities=24%  Similarity=0.275  Sum_probs=44.5

Q ss_pred             cceEEEEecCCCccCCCC-CCCHHHHHHHHHhhCCC-eEEEEEcCCCH-HHHHHHhcC
Q psy16481          5 ANTICLFDVDGTLTQPRQ-KAQNETLDFLLKKLKPL-SHLAIVSGSDM-NKVAEQLGG   59 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~-~i~~~~~~~~l~~l~~~-i~~~iaTGR~~-~~~~~~~~~   59 (175)
                      ..|+|++|+||||+..+. .+.+...++ |++|+++ ++++++|+.+. ..+...+..
T Consensus        24 ~v~~vv~D~Dgtl~~~~~~~~~pgv~e~-L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~   80 (170)
T TIGR01668        24 GIKGVVLDKDNTLVYPDHNEAYPALRDW-IEELKAAGRKLLIVSNNAGEQRAKAVEKA   80 (170)
T ss_pred             CCCEEEEecCCccccCCCCCcChhHHHH-HHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence            569999999999998766 788999999 9999999 99999999883 444444344

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=97.85  E-value=4.9e-05  Score=56.62  Aligned_cols=56  Identities=30%  Similarity=0.289  Sum_probs=42.7

Q ss_pred             ceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCC-CHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQ--------------------------KAQNETLDFLLKKLKPL-SHLAIVSGS-DMNKVAEQL   57 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR-~~~~~~~~~   57 (175)
                      .|+|+||+|+||.++..                          .+-+...+. |+.|+++ ++++++|++ +...+...+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~el-L~~Lk~~G~~l~I~Sn~~~~~~~~~~L   80 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDV-LQTLKDAGTYLATASWNDVPEWAYEIL   80 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHH-HHHHHHCCCEEEEEeCCCChHHHHHHH
Confidence            58999999999988321                          122556788 9999999 999999988 777666666


Q ss_pred             cCCCc
Q psy16481         58 GGEKV   62 (175)
Q Consensus        58 ~~~~~   62 (175)
                      +.+++
T Consensus        81 ~~~~l   85 (174)
T TIGR01685        81 GTFEI   85 (174)
T ss_pred             HhCCc
Confidence            66543

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=97.82  E-value=1.7e-05  Score=58.86  Aligned_cols=58  Identities=19%  Similarity=0.225  Sum_probs=49.2

Q ss_pred             CcceEEEEecCCCccCCC----------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPR----------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~----------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|+++||+||+|++..          +.++.+.-.+ |+.|+++ +.++|+|+++...+...++.+++
T Consensus         5 ~~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~-~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi   73 (169)
T TIGR02726         5 KNIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMG-VIVLQLCGIDVAIITSKKSGAVRHRAEELKI   73 (169)
T ss_pred             ccCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHH-HHHHHHCCCEEEEEECCCcHHHHHHHHHCCC
Confidence            568999999999999951          2566677788 9999999 99999999999999888888754

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=97.77  E-value=0.00011  Score=56.18  Aligned_cols=20  Identities=35%  Similarity=0.488  Sum_probs=18.3

Q ss_pred             CCCCcceEEEEecCCCccCC
Q psy16481          1 MTCRANTICLFDVDGTLTQP   20 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~   20 (175)
                      |.+..+|+|+||+||||+++
T Consensus         1 ~~~~~~~~iiFD~DGTL~d~   20 (226)
T PRK13222          1 MKFMDIRAVAFDLDGTLVDS   20 (226)
T ss_pred             CCCCcCcEEEEcCCcccccC
Confidence            78889999999999999975

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=97.76  E-value=3.1e-05  Score=59.03  Aligned_cols=38  Identities=34%  Similarity=0.297  Sum_probs=24.9

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      |+.|+++ +.++|+||.+...+...++..++...++.++
T Consensus        91 l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~  129 (214)
T PRK13288         91 LKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVI  129 (214)
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEE
Confidence            6677776 8888888887777766666655443333343

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=97.74  E-value=2.3e-05  Score=56.85  Aligned_cols=58  Identities=22%  Similarity=0.256  Sum_probs=45.6

Q ss_pred             CcceEEEEecCCCccCCC------C----CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPR------Q----KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~------~----~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|++++|+||||++-.      .    .+.-..=.. |+.|.+. ++++|.|||.-.-+.+.++.+|+
T Consensus         6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~G-ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI   74 (170)
T COG1778           6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHG-IKLLLKSGIKVAIITGRDSPIVEKRAKDLGI   74 (170)
T ss_pred             hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHH-HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCC
Confidence            578999999999999832      1    222222246 8888888 99999999999999999988875

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=97.70  E-value=4.5e-05  Score=61.13  Aligned_cols=56  Identities=23%  Similarity=0.331  Sum_probs=46.1

Q ss_pred             cceEEEEecCCCccCCC------------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481          5 ANTICLFDVDGTLTQPR------------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~------------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      +.+.+++|+||||....            ..+.+...+. |++|+++ +.++++|||+.......+..++
T Consensus       157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~  225 (300)
T PHA02530        157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVEL-VKMYKAAGYEIIVVSGRDGVCEEDTVEWLR  225 (300)
T ss_pred             CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHH-HHHHHhCCCEEEEEeCCChhhHHHHHHHHH
Confidence            35799999999999733            3577889999 9999999 9999999999988766665543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=97.69  E-value=3.9e-05  Score=61.15  Aligned_cols=19  Identities=32%  Similarity=0.450  Sum_probs=16.4

Q ss_pred             CCcceEEEEecCCCccCCC
Q psy16481          3 CRANTICLFDVDGTLTQPR   21 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~   21 (175)
                      ++.+|+|+|||||||+++.
T Consensus        59 ~~~~k~vIFDlDGTLiDS~   77 (273)
T PRK13225         59 PQTLQAIIFDFDGTLVDSL   77 (273)
T ss_pred             hhhcCEEEECCcCccccCH
Confidence            4578999999999999953

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=97.63  E-value=9.2e-05  Score=58.77  Aligned_cols=56  Identities=23%  Similarity=0.323  Sum_probs=43.8

Q ss_pred             CCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCC---HHHHHHHhcC
Q psy16481          2 TCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSD---MNKVAEQLGG   59 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~---~~~~~~~~~~   59 (175)
                      .++.++.++||+||||.+.+..|+ ...++ |++|+++ +++++.|-++   ...+...+..
T Consensus         4 ~~~~y~~~l~DlDGvl~~G~~~ip-ga~e~-l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~   63 (269)
T COG0647           4 VMDKYDGFLFDLDGVLYRGNEAIP-GAAEA-LKRLKAAGKPVIFLTNNSTRSREVVAARLSS   63 (269)
T ss_pred             hhhhcCEEEEcCcCceEeCCccCc-hHHHH-HHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence            467889999999999998877775 66899 9999999 9999988544   4434455544

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=97.63  E-value=0.00032  Score=53.90  Aligned_cols=80  Identities=14%  Similarity=0.079  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccc-eEEecCCceeeeCCeEeeccchhhhhCHHHHHHH
Q psy16481         24 AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFD-FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTF  101 (175)
Q Consensus        24 i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~-~~i~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i  101 (175)
                      +.+...+. ++.++++ .+++++||....-+.+..+.+|+..... -+...+|  + -.|+++-....    .+.....+
T Consensus        78 l~~ga~el-v~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG--~-ltG~v~g~~~~----~~~K~~~l  149 (212)
T COG0560          78 LTPGAEEL-VAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG--K-LTGRVVGPICD----GEGKAKAL  149 (212)
T ss_pred             CCccHHHH-HHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--E-EeceeeeeecC----cchHHHHH
Confidence            34446666 8888889 9999999999887777777766432111 1333344  1 13444322222    34567777


Q ss_pred             HHHHHHhccc
Q psy16481        102 INYCLQHLST  111 (175)
Q Consensus       102 ~~~~~~~~~~  111 (175)
                      .+++.+.+..
T Consensus       150 ~~~~~~~g~~  159 (212)
T COG0560         150 RELAAELGIP  159 (212)
T ss_pred             HHHHHHcCCC
Confidence            7777777654

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=97.61  E-value=0.0001  Score=58.27  Aligned_cols=18  Identities=6%  Similarity=0.106  Sum_probs=15.9

Q ss_pred             CcceEEEEecCCCccCCC
Q psy16481          4 RANTICLFDVDGTLTQPR   21 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~   21 (175)
                      +.+|+|+|||||||+++.
T Consensus        22 ~~~k~vIFDlDGTLvDS~   39 (260)
T PLN03243         22 CGWLGVVLEWEGVIVEDD   39 (260)
T ss_pred             CCceEEEEeCCCceeCCc
Confidence            468999999999999974

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=97.57  E-value=0.00015  Score=55.96  Aligned_cols=17  Identities=35%  Similarity=0.507  Sum_probs=15.1

Q ss_pred             CcceEEEEecCCCccCC
Q psy16481          4 RANTICLFDVDGTLTQP   20 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~   20 (175)
                      ..+|+|+|||||||++.
T Consensus         8 ~~~k~vIFDlDGTL~d~   24 (224)
T PRK14988          8 QDVDTVLLDMDGTLLDL   24 (224)
T ss_pred             ccCCEEEEcCCCCccch
Confidence            36799999999999994

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=97.57  E-value=0.00014  Score=55.51  Aligned_cols=34  Identities=18%  Similarity=0.105  Sum_probs=25.4

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+. |++|+++ ++++|+||.....+...++.+++
T Consensus        90 ~~~~-l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i  124 (219)
T TIGR00338        90 AEEL-VKTLKEKGYKVAVISGGFDLFAEHVKDKLGL  124 (219)
T ss_pred             HHHH-HHHHHHCCCEEEEECCCcHHHHHHHHHHcCC
Confidence            4445 7777777 89999999888777777766554

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PRK06769 hypothetical protein; Validated

Probab=97.53  E-value=6.5e-05  Score=55.77  Aligned_cols=47  Identities=19%  Similarity=0.074  Sum_probs=38.6

Q ss_pred             CCcceEEEEecCCCccCC------CC-CCCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          3 CRANTICLFDVDGTLTQP------RQ-KAQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~------~~-~i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      |+.+|+|++|.||||-..      +. ++-+...+. |++|+++ ++++++|+.+.
T Consensus         1 ~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~-L~~Lk~~G~~l~I~Tn~~~   55 (173)
T PRK06769          1 MTNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKAS-LQKLKANHIKIFSFTNQPG   55 (173)
T ss_pred             CCCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHH-HHHHHHCCCEEEEEECCch
Confidence            468999999999999544      22 456788898 9999999 99999998763

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=97.50  E-value=0.00043  Score=50.77  Aligned_cols=57  Identities=25%  Similarity=0.249  Sum_probs=51.1

Q ss_pred             cceEEEEecCCCccCCCC-CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQPRQ-KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~-~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+|-|++|+|.||++-+. ..+|+.++- +.+++++ +.++++|-.....+....+.+++
T Consensus        27 Gikgvi~DlDNTLv~wd~~~~tpe~~~W-~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v   85 (175)
T COG2179          27 GIKGVILDLDNTLVPWDNPDATPELRAW-LAELKEAGIKVVVVSNNKESRVARAAEKLGV   85 (175)
T ss_pred             CCcEEEEeccCceecccCCCCCHHHHHH-HHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence            578999999999999665 899999999 9999999 99999999999999888887654

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=97.45  E-value=8.2e-05  Score=54.62  Aligned_cols=39  Identities=28%  Similarity=0.451  Sum_probs=30.0

Q ss_pred             eEEEEecCCCccCCCC------------CCCHHHHHHHHHhhCCC-eEEEEEc
Q psy16481          7 TICLFDVDGTLTQPRQ------------KAQNETLDFLLKKLKPL-SHLAIVS   46 (175)
Q Consensus         7 kli~~DlDGTLl~~~~------------~i~~~~~~~~l~~l~~~-i~~~iaT   46 (175)
                      |+.+||+||||.....            -+.+...++ |++|.+. ..+||+|
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~-L~~l~~~Gy~IvIvT   52 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEA-LRELHKKGYKIVIVT   52 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHH-HHHHHHTTEEEEEEE
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHH-HHHHHhcCCeEEEEe
Confidence            7899999999987421            245578899 9999888 9999998

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=97.44  E-value=0.00018  Score=53.60  Aligned_cols=44  Identities=11%  Similarity=0.255  Sum_probs=35.0

Q ss_pred             cceEEEEecCCCccCCCC---------CCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ---------KAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~---------~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      -+|+++||+||||.-...         .+-+...+. |++|+++ ++++|+|..+
T Consensus         2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~-L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942          2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEA-IARLKQAGYRVVVATNQS   55 (181)
T ss_pred             CccEEEEECCCCcccCCccccCCHHHeEECCCHHHH-HHHHHHCCCEEEEEeCCc
Confidence            479999999999865432         233456788 9999999 9999999876

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=97.43  E-value=9.8e-05  Score=54.82  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=34.7

Q ss_pred             eEEEEecCCCccCCC--------CCCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          7 TICLFDVDGTLTQPR--------QKAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         7 kli~~DlDGTLl~~~--------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      |++++|.||||+...        -.+-|...++ |++|+++ ++++++|.-+
T Consensus         2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~-L~~Lk~~G~~l~i~TN~~   52 (176)
T TIGR00213         2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDA-LRELKKMGYALVLVTNQS   52 (176)
T ss_pred             CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHH-HHHHHHCCCEEEEEeCCc
Confidence            789999999999532        1345678898 9999999 9999999765

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>PLN02940 riboflavin kinase

Probab=97.42  E-value=0.00017  Score=60.21  Aligned_cols=39  Identities=21%  Similarity=0.313  Sum_probs=26.4

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhc-CCCcccccceEEe
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLG-GEKVLEQFDFVFP   71 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~-~~~~~~~~~~~i~   71 (175)
                      |++|+++ ++++|+|+.+...+...+. ..++...++.+++
T Consensus       102 L~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~  142 (382)
T PLN02940        102 IKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVG  142 (382)
T ss_pred             HHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEe
Confidence            6677777 8999999988877766664 4444344555554

>PLN02954 phosphoserine phosphatase

Probab=97.40  E-value=0.00016  Score=55.41  Aligned_cols=33  Identities=21%  Similarity=0.233  Sum_probs=25.6

Q ss_pred             HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         29 LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        29 ~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+. |+.++++ +.++|+||.....+...++.+++
T Consensus        90 ~e~-l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi  123 (224)
T PLN02954         90 PEL-VKKLRARGTDVYLVSGGFRQMIAPVAAILGI  123 (224)
T ss_pred             HHH-HHHHHHCCCEEEEECCCcHHHHHHHHHHhCC
Confidence            334 6777777 89999999998888877777654

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=97.39  E-value=0.00039  Score=52.42  Aligned_cols=33  Identities=15%  Similarity=0.124  Sum_probs=25.5

Q ss_pred             HHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         29 LDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        29 ~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+. |+.|++++.++++||.....+...++.+++
T Consensus        74 ~e~-L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl  106 (205)
T PRK13582         74 VEF-LDWLRERFQVVILSDTFYEFAGPLMRQLGW  106 (205)
T ss_pred             HHH-HHHHHhcCCEEEEeCCcHHHHHHHHHHcCC
Confidence            345 777766678999999999988888777654

>TIGR01686 FkbH FkbH-like domain

Probab=97.38  E-value=0.00054  Score=55.75  Aligned_cols=54  Identities=22%  Similarity=0.233  Sum_probs=44.6

Q ss_pred             cceEEEEecCCCccCC---CC--------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcC
Q psy16481          5 ANTICLFDVDGTLTQP---RQ--------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGG   59 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~---~~--------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~   59 (175)
                      .+|+|++|+|+||+..   +.        ..-+...+. |++|+++ +.+++||..+...+...++.
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~-L~~L~~~Gi~lai~S~n~~~~a~~~l~~   67 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEK-IKTLKKQGFLLALASKNDEDDAKKVFER   67 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHH-HHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence            5799999999999873   11        123667888 9999999 99999999999988887776

The C-terminal portion of this domain is unique to this family (by BLAST).

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=97.37  E-value=0.00054  Score=49.50  Aligned_cols=55  Identities=20%  Similarity=0.215  Sum_probs=42.8

Q ss_pred             ceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcC
Q psy16481          6 NTICLFDVDGTLTQPRQ--------------------------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGG   59 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~--------------------------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~   59 (175)
                      ++++++||||||+....                          .+-|...+. |+.|++.+.++|+|..+...+...++.
T Consensus         2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~-L~~L~~~~~l~I~Ts~~~~~~~~il~~   80 (148)
T smart00577        2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEF-LKRASELFELVVFTAGLRMYADPVLDL   80 (148)
T ss_pred             CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHH-HHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence            67899999999999631                          113456777 999984499999999999988777766


Q ss_pred             CC
Q psy16481         60 EK   61 (175)
Q Consensus        60 ~~   61 (175)
                      ++
T Consensus        81 l~   82 (148)
T smart00577       81 LD   82 (148)
T ss_pred             hC
Confidence            54

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.35  E-value=0.00027  Score=51.66  Aligned_cols=45  Identities=13%  Similarity=0.308  Sum_probs=37.3

Q ss_pred             EEEEecCCCccCCCC-----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH
Q psy16481          8 ICLFDVDGTLTQPRQ-----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV   53 (175)
Q Consensus         8 li~~DlDGTLl~~~~-----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~   53 (175)
                      .|++|+|||++.++-           ...+...+. .++++++ ++++-.|+|+....
T Consensus         1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l-~~~i~~~GY~ilYlTaRp~~qa   57 (157)
T PF08235_consen    1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAEL-YRKIADNGYKILYLTARPIGQA   57 (157)
T ss_pred             CEEEeccCCcCccchhhhhhhccCchhhhhcHHHH-HHHHHHCCeEEEEECcCcHHHH
Confidence            489999999999851           345667777 9999999 99999999998754

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=97.33  E-value=0.00093  Score=53.06  Aligned_cols=72  Identities=25%  Similarity=0.292  Sum_probs=52.9

Q ss_pred             cceEEEEecCCCccCCCC--CC-CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          5 ANTICLFDVDGTLTQPRQ--KA-QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~--~i-~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      ...+|+||||.||+++..  +| +|...+. |.+|+++ ..+++=|=.....+...+...++...++.+|| +|...-
T Consensus       121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~s-L~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~-~G~~~~  196 (297)
T PF05152_consen  121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDS-LRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIIC-GGNKAG  196 (297)
T ss_pred             CCcEEEEECCCcccccCCccccCChHHHHH-HHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEe-CCccCC
Confidence            457899999999998765  34 5677788 9999999 67777666666777667766666666776776 555443

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=97.33  E-value=0.00011  Score=54.68  Aligned_cols=34  Identities=18%  Similarity=0.272  Sum_probs=25.6

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      ++++|+|+||+||||+++.........++ +++..
T Consensus         2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~-~~~~g   35 (188)
T PRK10725          2 YDRYAGLIFDMDGTILDTEPTHRKAWREV-LGRYG   35 (188)
T ss_pred             CCcceEEEEcCCCcCccCHHHHHHHHHHH-HHHcC
Confidence            45689999999999999876555555555 66543

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=97.32  E-value=0.00048  Score=59.59  Aligned_cols=45  Identities=24%  Similarity=0.342  Sum_probs=36.1

Q ss_pred             cceEEEEecCCCccCCCC-----------C-CCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          5 ANTICLFDVDGTLTQPRQ-----------K-AQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~-----------~-i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      +.|+++||+||||.....           + +-+...++ |++|.++ +.++|+|.-+-
T Consensus       167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~-L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEK-LKELEADGFKICIFTNQGG  224 (526)
T ss_pred             cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHH-HHHHHHCCCEEEEEECCcc
Confidence            569999999999987431           1 35778888 9999999 99999996444

Note that the EC number for the kinase function is: 2.7.1.78

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=97.32  E-value=0.0005  Score=50.87  Aligned_cols=58  Identities=26%  Similarity=0.298  Sum_probs=44.7

Q ss_pred             CCcceEEEEecCCCccCCCC-CCCHHHHHHHHHhhCCC-e--EEEEEcCCC-------HHHHHHHhcCCC
Q psy16481          3 CRANTICLFDVDGTLTQPRQ-KAQNETLDFLLKKLKPL-S--HLAIVSGSD-------MNKVAEQLGGEK   61 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~-~i~~~~~~~~l~~l~~~-i--~~~iaTGR~-------~~~~~~~~~~~~   61 (175)
                      ...+|.|+||.|.||+..+. +++++..+. ++++++. .  .++|+|-..       ...+..+-+.++
T Consensus        38 ~~Gik~li~DkDNTL~~~~~~~i~~~~~~~-~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lg  106 (168)
T PF09419_consen   38 KKGIKALIFDKDNTLTPPYEDEIPPEYAEW-LNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALG  106 (168)
T ss_pred             hcCceEEEEcCCCCCCCCCcCcCCHHHHHH-HHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhC
Confidence            35789999999999997665 999999999 9999987 4  599998763       444544444443

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=97.29  E-value=0.00059  Score=51.24  Aligned_cols=16  Identities=38%  Similarity=0.411  Sum_probs=13.6

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|+|.||+||||++..
T Consensus         1 ik~viFD~dgTLiD~~   16 (198)
T TIGR01428         1 IKALVFDVYGTLFDVH   16 (198)
T ss_pred             CcEEEEeCCCcCccHH
Confidence            4789999999999843

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=97.24  E-value=0.00035  Score=58.10  Aligned_cols=39  Identities=15%  Similarity=0.238  Sum_probs=25.4

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      |+.|+++ ++++|+|+++...+...++..++...++.+++
T Consensus       225 L~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~  264 (381)
T PLN02575        225 VNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVA  264 (381)
T ss_pred             HHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEe
Confidence            5556666 78888888887777777766655444444444

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=97.23  E-value=0.00064  Score=49.96  Aligned_cols=41  Identities=27%  Similarity=0.382  Sum_probs=33.5

Q ss_pred             eEEEEecCCCccCCCC-----------CCCHHHHHHHHHhhCCC-eEEEEEcCC
Q psy16481          7 TICLFDVDGTLTQPRQ-----------KAQNETLDFLLKKLKPL-SHLAIVSGS   48 (175)
Q Consensus         7 kli~~DlDGTLl~~~~-----------~i~~~~~~~~l~~l~~~-i~~~iaTGR   48 (175)
                      |.++||.||||.....           .+-+...++ |++|+++ ++++++|-.
T Consensus         2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~-L~~L~~~g~~l~IvSN~   54 (161)
T TIGR01261         2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPA-LLKLKKAGYKFVMVTNQ   54 (161)
T ss_pred             CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHH-HHHHHHCCCeEEEEeCC
Confidence            7899999999988422           334667898 9999999 999999974

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=97.20  E-value=0.0014  Score=51.22  Aligned_cols=34  Identities=3%  Similarity=0.037  Sum_probs=24.0

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHH----HHHHHhcCCCc
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMN----KVAEQLGGEKV   62 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~----~~~~~~~~~~~   62 (175)
                      .++. |+.|+++ ++++++|||+..    .+..+++.+++
T Consensus       119 a~el-L~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi  157 (237)
T PRK11009        119 ARQL-IDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI  157 (237)
T ss_pred             HHHH-HHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence            6777 9999888 999999999622    33444444444

>PTZ00445 p36-lilke protein; Provisional

Probab=97.16  E-value=0.00043  Score=52.86  Aligned_cols=46  Identities=20%  Similarity=0.080  Sum_probs=37.9

Q ss_pred             CcceEEEEecCCCccC-----CCCC----------CCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          4 RANTICLFDVDGTLTQ-----PRQK----------AQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~-----~~~~----------i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      ..+|+|++|+|-||+.     ....          ++|+.+.. +++|++. +.++|+|=.+-
T Consensus        41 ~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~-~~~l~~~~I~v~VVTfSd~  102 (219)
T PTZ00445         41 CGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKIL-GKRLKNSNIKISVVTFSDK  102 (219)
T ss_pred             cCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHH-HHHHHHCCCeEEEEEccch
Confidence            3689999999999998     3332          78888887 9999998 99999996554

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=97.13  E-value=0.00024  Score=54.44  Aligned_cols=36  Identities=28%  Similarity=0.360  Sum_probs=26.6

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      |++..+|.|+||+||||+++...+.....++ ++++.
T Consensus         2 ~~~~~~k~iiFD~DGTL~d~~~~~~~a~~~~-~~~~g   37 (222)
T PRK10826          2 STPRQILAAIFDMDGLLIDSEPLWDRAELDV-MASLG   37 (222)
T ss_pred             CCcccCcEEEEcCCCCCCcCHHHHHHHHHHH-HHHCC
Confidence            5556799999999999999876555554555 65554

>PRK08238 hypothetical protein; Validated

Probab=97.11  E-value=0.0013  Score=56.47  Aligned_cols=47  Identities=26%  Similarity=0.398  Sum_probs=37.0

Q ss_pred             CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCc
Q psy16481         25 QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGL   75 (175)
Q Consensus        25 ~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa   75 (175)
                      .+...+. |++++++ .++++|||.+...+...++.+|+   ++.+++.++.
T Consensus        74 ~pga~e~-L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~  121 (479)
T PRK08238         74 NEEVLDY-LRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGT  121 (479)
T ss_pred             ChhHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCc
Confidence            3567788 9999999 99999999999888877777653   4567776654

>PRK11587 putative phosphatase; Provisional

Probab=97.10  E-value=0.00023  Score=54.48  Aligned_cols=32  Identities=22%  Similarity=0.288  Sum_probs=24.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      ++|.|+|||||||+++...+.....++ ++++.
T Consensus         2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~-~~~~g   33 (218)
T PRK11587          2 RCKGFLFDLDGTLVDSLPAVERAWSNW-ADRHG   33 (218)
T ss_pred             CCCEEEEcCCCCcCcCHHHHHHHHHHH-HHHcC
Confidence            478999999999999876555555555 66544

>TIGR01675 plant-AP plant acid phosphatase

Probab=97.10  E-value=0.0013  Score=51.07  Aligned_cols=48  Identities=27%  Similarity=0.294  Sum_probs=38.0

Q ss_pred             CcceEEEEecCCCccCCC--------------------------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH
Q psy16481          4 RANTICLFDVDGTLTQPR--------------------------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNK   52 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~--------------------------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~   52 (175)
                      ..+-+++||+|.|+|.+-                          .+.-+.++++ ++.|+++ +.++++|||+...
T Consensus        75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l-~~~l~~~G~~Vf~lTGR~e~~  149 (229)
T TIGR01675        75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKL-YQKIIELGIKIFLLSGRWEEL  149 (229)
T ss_pred             CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHH-HHHHHHCCCEEEEEcCCChHH
Confidence            356789999999999832                          1234556778 9999999 9999999999765

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=97.09  E-value=0.0012  Score=48.76  Aligned_cols=38  Identities=13%  Similarity=0.140  Sum_probs=21.8

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      |+.|+++ +.++++|+.....+...+...++...++.++
T Consensus        81 l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~  119 (188)
T TIGR01489        81 IAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIY  119 (188)
T ss_pred             HHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEe
Confidence            4555555 7777777777666666655544433233344

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=97.07  E-value=0.00032  Score=54.59  Aligned_cols=33  Identities=21%  Similarity=0.167  Sum_probs=23.9

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      ..++|+|+||+||||+++..-+.....++ ++.+
T Consensus         7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~-~~~~   39 (238)
T PRK10748          7 LGRISALTFDLDDTLYDNRPVILRTEQEA-LAFV   39 (238)
T ss_pred             CCCceeEEEcCcccccCChHHHHHHHHHH-HHHH
Confidence            45679999999999999876555544444 4444

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=97.07  E-value=0.0022  Score=51.00  Aligned_cols=57  Identities=18%  Similarity=0.177  Sum_probs=40.2

Q ss_pred             cceEEEEecCCCccCCC----------CCCCH----------------HHHHHHHHhhCCC-eEEEEEcCCCHHHH---H
Q psy16481          5 ANTICLFDVDGTLTQPR----------QKAQN----------------ETLDFLLKKLKPL-SHLAIVSGSDMNKV---A   54 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~----------~~i~~----------------~~~~~~l~~l~~~-i~~~iaTGR~~~~~---~   54 (175)
                      +..+|+||+|+|+|++.          ...++                ...+. |+.|.++ +.++++|+|+....   .
T Consensus        74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~-L~~L~~~G~~v~iVTnR~~~~~~~T~  152 (266)
T TIGR01533        74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDF-LNYANSKGVKIFYVSNRSEKEKAATL  152 (266)
T ss_pred             CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHH-HHHHHHCCCeEEEEeCCCcchHHHHH
Confidence            45799999999998643          23333                34566 8899888 99999999985433   3


Q ss_pred             HHhcCCCc
Q psy16481         55 EQLGGEKV   62 (175)
Q Consensus        55 ~~~~~~~~   62 (175)
                      ..+...|+
T Consensus       153 ~~Lkk~Gi  160 (266)
T TIGR01533       153 KNLKRFGF  160 (266)
T ss_pred             HHHHHcCc
Confidence            44555544

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.07  E-value=0.0012  Score=53.84  Aligned_cols=53  Identities=23%  Similarity=0.258  Sum_probs=38.0

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCC-----CeEEEEEc---CCCHHHHHHHh-cCCCc
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKP-----LSHLAIVS---GSDMNKVAEQL-GGEKV   62 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~-----~i~~~iaT---GR~~~~~~~~~-~~~~~   62 (175)
                      .++||+||||++.+.. -+...++ |++|++     .+.+.+.|   |++.......+ ..+|+
T Consensus         2 ~~ifD~DGvL~~g~~~-i~ga~ea-l~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~   63 (321)
T TIGR01456         2 GFAFDIDGVLFRGKKP-IAGASDA-LRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV   63 (321)
T ss_pred             EEEEeCcCceECCccc-cHHHHHH-HHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence            5899999999998765 6777899 988887     55555555   66777655544 44443

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=97.02  E-value=0.00061  Score=53.81  Aligned_cols=33  Identities=15%  Similarity=0.143  Sum_probs=22.7

Q ss_pred             CCcceEEEEecCCCccCCCCCC-CHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKA-QNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i-~~~~~~~~l~~l   36 (175)
                      |.++|+|+||+||||+++.... .....++ +++.
T Consensus         1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~-~~~~   34 (267)
T PRK13478          1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEA-FAQF   34 (267)
T ss_pred             CCceEEEEEcCCCCeecCCCccHHHHHHHH-HHHc
Confidence            3468999999999999985432 2344444 5554

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=96.90  E-value=0.0019  Score=47.29  Aligned_cols=30  Identities=23%  Similarity=0.019  Sum_probs=23.3

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      |+.++++ +.++|+||.....+...++.+++
T Consensus        82 l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~  112 (177)
T TIGR01488        82 ISWLKERGIDTVIVSGGFDFFVEPVAEKLGI  112 (177)
T ss_pred             HHHHHHCCCEEEEECCCcHHHHHHHHHHcCC
Confidence            5666667 89999999988888777776654

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=96.89  E-value=0.00043  Score=54.22  Aligned_cols=32  Identities=28%  Similarity=0.380  Sum_probs=24.4

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      .++|.|+|||||||+++...+-....++ ++++
T Consensus        20 ~~~k~viFDlDGTLiDs~~~~~~a~~~~-~~~~   51 (248)
T PLN02770         20 APLEAVLFDVDGTLCDSDPLHYYAFREM-LQEI   51 (248)
T ss_pred             CccCEEEEcCCCccCcCHHHHHHHHHHH-HHHh
Confidence            4679999999999999876555555555 6665

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=96.88  E-value=0.00066  Score=51.81  Aligned_cols=30  Identities=10%  Similarity=0.115  Sum_probs=23.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|+|+||+||||+++.........++ +++.
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~-~~~~   30 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQA-VTAA   30 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHH-HHHc
Confidence            58999999999999887665555555 6554

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=96.81  E-value=0.00083  Score=50.61  Aligned_cols=29  Identities=21%  Similarity=0.296  Sum_probs=21.7

Q ss_pred             eEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          7 TICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         7 kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |+|+||+||||+++.........++ +++.
T Consensus         1 k~viFDlDGTL~d~~~~~~~a~~~~-~~~~   29 (203)
T TIGR02252         1 KLITFDAVGTLLALKEPVGEVYCEI-ARKY   29 (203)
T ss_pred             CeEEEecCCceeeeCCCHHHHHHHH-HHHh
Confidence            6899999999999876665555555 5544

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=96.79  E-value=0.00079  Score=51.76  Aligned_cols=34  Identities=26%  Similarity=0.263  Sum_probs=26.7

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      ..++.|+||+||||+++...+......+ ++++.-
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~-~~~~~~   35 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAA-LAELGL   35 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHH-HHHcCC
Confidence            4689999999999999987776666666 666543

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=96.77  E-value=0.00099  Score=48.42  Aligned_cols=52  Identities=21%  Similarity=0.301  Sum_probs=35.9

Q ss_pred             eEEEEecCCCccCCCCC-------------------CCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcC
Q psy16481          7 TICLFDVDGTLTQPRQK-------------------AQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGG   59 (175)
Q Consensus         7 kli~~DlDGTLl~~~~~-------------------i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~   59 (175)
                      |++++||||||+.+...                   +=|...+. |+.+.+...++|.|..+..-+...+..
T Consensus         1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~F-L~~l~~~~ev~i~T~~~~~ya~~v~~~   71 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEF-LEELSKHYEVVIWTSASEEYAEPVLDA   71 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHH-HHHHHHHCEEEEE-SS-HHHHHHHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHH-HHHHHHhceEEEEEeehhhhhhHHHHh
Confidence            78999999999985432                   34667777 998855599999999887766555443

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=96.74  E-value=0.00066  Score=50.16  Aligned_cols=18  Identities=22%  Similarity=0.486  Sum_probs=15.7

Q ss_pred             ceEEEEecCCCccCCCCC
Q psy16481          6 NTICLFDVDGTLTQPRQK   23 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~   23 (175)
                      +|+|+||+||||+++...
T Consensus         1 ~~~iiFD~DGTL~ds~~~   18 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPL   18 (185)
T ss_pred             CCeEEEcCCCcccCChHH
Confidence            589999999999999753

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=96.72  E-value=0.00062  Score=51.22  Aligned_cols=29  Identities=17%  Similarity=0.381  Sum_probs=23.0

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      +|+|||||||+++..-+-....++ ++++.
T Consensus         2 ~viFD~DGTLiDs~~~~~~a~~~~-~~~~g   30 (197)
T TIGR01548         2 ALVLDMDGVMADVSQSYRRAIIDT-VEHFG   30 (197)
T ss_pred             ceEEecCceEEechHHHHHHHHHH-HHHHc
Confidence            689999999999987666666666 77654

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=96.71  E-value=0.0023  Score=47.88  Aligned_cols=46  Identities=22%  Similarity=0.287  Sum_probs=38.6

Q ss_pred             ceEEEEecCCCccCCCC---------CCCHHHHHHHHHhhCCC-eEEEEEc-----CCCHHH
Q psy16481          6 NTICLFDVDGTLTQPRQ---------KAQNETLDFLLKKLKPL-SHLAIVS-----GSDMNK   52 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~---------~i~~~~~~~~l~~l~~~-i~~~iaT-----GR~~~~   52 (175)
                      .|++|+|-||||..+..         .+.+...++ +.+|++. .++|++|     ||.+..
T Consensus         5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~a-l~~l~~~gy~lVvvTNQsGi~rgyf~   65 (181)
T COG0241           5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPA-LLKLQRAGYKLVVVTNQSGIGRGYFT   65 (181)
T ss_pred             CcEEEEcCCCceecCCCcccCcHHHhccCccHHHH-HHHHHhCCCeEEEEECCCCccccCcc
Confidence            78999999999977544         556778999 9999988 9999999     677764

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=96.69  E-value=0.0025  Score=47.21  Aligned_cols=56  Identities=27%  Similarity=0.294  Sum_probs=34.1

Q ss_pred             ceEEEEecCCCccCCCC-------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHH-HHHHHhc
Q psy16481          6 NTICLFDVDGTLTQPRQ-------------------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMN-KVAEQLG   58 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~-------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~-~~~~~~~   58 (175)
                      .|||+||||+||.+..-                         ++=+...+. |+.|+++ +++++||=-+.. .+++.++
T Consensus         3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~i-L~~L~~~gv~lavASRt~~P~~A~~~L~   81 (169)
T PF12689_consen    3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEI-LQELKERGVKLAVASRTDEPDWARELLK   81 (169)
T ss_dssp             -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHH-HHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred             CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHH-HHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence            58999999999988321                         233456777 9999999 999999965444 4556666


Q ss_pred             CCCc
Q psy16481         59 GEKV   62 (175)
Q Consensus        59 ~~~~   62 (175)
                      .+++
T Consensus        82 ~l~i   85 (169)
T PF12689_consen   82 LLEI   85 (169)
T ss_dssp             HTT-
T ss_pred             hcCC
Confidence            6543

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=96.67  E-value=0.0018  Score=49.37  Aligned_cols=32  Identities=22%  Similarity=0.266  Sum_probs=23.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      +|+|.||+||||+++...+......+ .+.+.+
T Consensus         2 ~~~viFDlDGTL~ds~~~~~~~~~~~-~~~~~~   33 (221)
T TIGR02253         2 IKAIFFDLDDTLIDTSGLAEKARRNA-IEVLIE   33 (221)
T ss_pred             ceEEEEeCCCCCcCCCCccCHHHHHH-HHHHHH
Confidence            68999999999999987665554444 444433

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=96.65  E-value=0.0028  Score=48.53  Aligned_cols=28  Identities=25%  Similarity=0.093  Sum_probs=22.5

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCC
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      |+.++++ ++++|+||.....+...++.+
T Consensus        83 l~~l~~~g~~~~IvS~~~~~~i~~il~~~  111 (219)
T PRK09552         83 VQFVKENNIPFYVVSGGMDFFVYPLLQGL  111 (219)
T ss_pred             HHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence            6667777 999999999988887777664

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=96.62  E-value=0.003  Score=52.17  Aligned_cols=43  Identities=26%  Similarity=0.318  Sum_probs=36.7

Q ss_pred             cceEEEEecCCCccCCC-----------CCCCHHHHHHHHHhhCCC-eEEEEEcCC
Q psy16481          5 ANTICLFDVDGTLTQPR-----------QKAQNETLDFLLKKLKPL-SHLAIVSGS   48 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~-----------~~i~~~~~~~~l~~l~~~-i~~~iaTGR   48 (175)
                      ++|++++|-||||....           ..+-|...+. |++|+++ ++++|+|..
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~-L~~Lk~~G~kL~IvTNq   55 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPA-LLKLQKAGYKLVMVTNQ   55 (354)
T ss_pred             CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHH-HHHHHhCCCeEEEEECC
Confidence            46899999999999852           3567778899 9999998 999999984

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=96.61  E-value=0.0019  Score=50.44  Aligned_cols=31  Identities=13%  Similarity=0.154  Sum_probs=21.3

Q ss_pred             cceEEEEecCCCccCCCCC-CCHHHHHHHHHhh
Q psy16481          5 ANTICLFDVDGTLTQPRQK-AQNETLDFLLKKL   36 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~-i~~~~~~~~l~~l   36 (175)
                      ++|.|+||+||||+++... ......++ +++.
T Consensus         1 ~~k~viFD~DGTLiDs~~~~~~~a~~~~-~~~~   32 (253)
T TIGR01422         1 KIEAVIFDWAGTTVDFGSFAPTQAFVEA-FAEF   32 (253)
T ss_pred             CceEEEEeCCCCeecCCCccHHHHHHHH-HHHc
Confidence            3789999999999998543 23344445 5543

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=96.60  E-value=0.0013  Score=50.31  Aligned_cols=19  Identities=32%  Similarity=0.485  Sum_probs=16.4

Q ss_pred             CcceEEEEecCCCccCCCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ   22 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~   22 (175)
                      .++|+|+||+||||+++..
T Consensus         2 ~~~~~viFD~DGTL~d~~~   20 (221)
T PRK10563          2 SQIEAVFFDCDGTLVDSEV   20 (221)
T ss_pred             CCCCEEEECCCCCCCCChH
Confidence            3589999999999999754

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=96.59  E-value=0.0011  Score=53.19  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=24.1

Q ss_pred             CCcceEEEEecCCCccCCC-CCCCHHHHHHHHHhhC
Q psy16481          3 CRANTICLFDVDGTLTQPR-QKAQNETLDFLLKKLK   37 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~-~~i~~~~~~~~l~~l~   37 (175)
                      ++.+|+|+|||||||+++. .-......++ ++++.
T Consensus        37 ~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~-l~~~G   71 (286)
T PLN02779         37 SALPEALLFDCDGVLVETERDGHRVAFNDA-FKEFG   71 (286)
T ss_pred             ccCCcEEEEeCceeEEccccHHHHHHHHHH-HHHcC
Confidence            3467999999999999997 5444444555 66543

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=96.58  E-value=0.0013  Score=50.08  Aligned_cols=29  Identities=17%  Similarity=0.185  Sum_probs=21.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKK   35 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~   35 (175)
                      +|+|+||+||||+++.........++ +++
T Consensus         1 ~k~viFD~DGTL~d~~~~~~~~~~~~-~~~   29 (224)
T TIGR02254         1 YKTLLFDLDDTILDFQAAEALALRLL-FED   29 (224)
T ss_pred             CCEEEEcCcCcccccchHHHHHHHHH-HHH
Confidence            58999999999999876554444444 443

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=96.54  E-value=0.00095  Score=53.07  Aligned_cols=31  Identities=26%  Similarity=0.406  Sum_probs=21.3

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHh
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKK   35 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~   35 (175)
                      .=+|+|+|||||||+++...+.....++ +++
T Consensus        11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~-~~~   41 (272)
T PRK13223         11 RLPRLVMFDLDGTLVDSVPDLAAAVDRM-LLE   41 (272)
T ss_pred             ccCCEEEEcCCCccccCHHHHHHHHHHH-HHH
Confidence            3468999999999999866444333333 443

>PRK11590 hypothetical protein; Provisional

Probab=96.53  E-value=0.0021  Score=49.08  Aligned_cols=20  Identities=40%  Similarity=0.728  Sum_probs=16.8

Q ss_pred             CCCCcceEEEEecCCCccCC
Q psy16481          1 MTCRANTICLFDVDGTLTQP   20 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~   20 (175)
                      |...+.|+++||+||||+..
T Consensus         1 ~~~~~~k~~iFD~DGTL~~~   20 (211)
T PRK11590          1 MATHERRVVFFDLDGTLHQQ   20 (211)
T ss_pred             CCCccceEEEEecCCCCccc
Confidence            55668899999999999943

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=96.38  E-value=0.0014  Score=50.59  Aligned_cols=31  Identities=26%  Similarity=0.309  Sum_probs=22.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      .|.|+||+||||+++..-+......+ +++..
T Consensus        12 ~k~viFD~DGTL~Ds~~~~~~a~~~~-~~~~g   42 (229)
T PRK13226         12 PRAVLFDLDGTLLDSAPDMLATVNAM-LAARG   42 (229)
T ss_pred             CCEEEEcCcCccccCHHHHHHHHHHH-HHHCC
Confidence            37899999999999876555555555 55543

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=96.35  E-value=0.0013  Score=51.05  Aligned_cols=47  Identities=15%  Similarity=0.265  Sum_probs=35.9

Q ss_pred             cceEEEEecCCCccCCCC--------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQ--------------------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNK   52 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~--------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~   52 (175)
                      +...|+||+|+|+|++-.                          ..-|...+. ++.+.++ +.|+++|||+-..
T Consensus        71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l-~~~~~~~G~~V~~iT~R~~~~  144 (229)
T PF03767_consen   71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALEL-YNYARSRGVKVFFITGRPESQ  144 (229)
T ss_dssp             SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHH-HHHHHHTTEEEEEEEEEETTC
T ss_pred             CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHH-HHHHHHCCCeEEEEecCCchh
Confidence            567899999999986210                          112336677 8999999 9999999999774

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=96.32  E-value=0.025  Score=44.17  Aligned_cols=57  Identities=19%  Similarity=0.233  Sum_probs=38.9

Q ss_pred             CHHHHHHHHHhh--CCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481         25 QNETLDFLLKKL--KPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus        25 ~~~~~~~~l~~l--~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      ++...++ ++.+  .+. +.++|+|--.-..+...++..|+...+..+++ |-+.+-.+|..
T Consensus        73 ~pgm~~~-l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~T-Npa~~~~~G~l  132 (234)
T PF06888_consen   73 DPGMKEL-LRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFT-NPACFDADGRL  132 (234)
T ss_pred             CccHHHH-HHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEe-CCceecCCceE
Confidence            3335666 7788  345 99999998888889999988776554545555 66655445543

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=96.28  E-value=0.0035  Score=46.51  Aligned_cols=24  Identities=21%  Similarity=0.166  Sum_probs=18.5

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHH
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDF   31 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~   31 (175)
                      +|+|||||||+++...+-....++
T Consensus         2 ~viFDlDGTL~ds~~~~~~~~~~~   25 (184)
T TIGR01993         2 VWFFDLDNTLYPHSAGIFLQIDRN   25 (184)
T ss_pred             eEEEeCCCCCCCCcccHHHHHHHH
Confidence            689999999999876665555544

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=96.25  E-value=0.0021  Score=49.51  Aligned_cols=32  Identities=28%  Similarity=0.383  Sum_probs=21.7

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      .+|.+.|||||||+++..-......++ +++..
T Consensus         1 ~~~avIFD~DGvLvDse~~~~~a~~~~-~~~~g   32 (221)
T COG0637           1 MIKAVIFDMDGTLVDSEPLHARAWLEA-LKEYG   32 (221)
T ss_pred             CCcEEEEcCCCCcCcchHHHHHHHHHH-HHHcC
Confidence            368999999999999954333333344 55544

>COG4996 Predicted phosphatase [General function prediction only]

Probab=96.24  E-value=0.013  Score=41.57  Aligned_cols=63  Identities=21%  Similarity=0.228  Sum_probs=45.7

Q ss_pred             eEEEEecCCCccCCCC------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481          7 TICLFDVDGTLTQPRQ------------------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus         7 kli~~DlDGTLl~~~~------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      ++|+||.||||.+...                        .+-+..++. ++.++.. ..+..+|=+....+.+.+..++
T Consensus         1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~-l~warnsG~i~~~~sWN~~~kA~~aLral~   79 (164)
T COG4996           1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKET-LKWARNSGYILGLASWNFEDKAIKALRALD   79 (164)
T ss_pred             CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHH-HHHHHhCCcEEEEeecCchHHHHHHHHHhc
Confidence            4799999999998432                        123456777 9999988 9999999998888777666655


Q ss_pred             cccccceEE
Q psy16481         62 VLEQFDFVF   70 (175)
Q Consensus        62 ~~~~~~~~i   70 (175)
                      +...+.|++
T Consensus        80 ~~~yFhy~V   88 (164)
T COG4996          80 LLQYFHYIV   88 (164)
T ss_pred             hhhhEEEEE
Confidence            444444443

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=96.10  E-value=0.008  Score=47.77  Aligned_cols=47  Identities=32%  Similarity=0.402  Sum_probs=34.6

Q ss_pred             cceEEEEecCCCccCC----------CC-----------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH
Q psy16481          5 ANTICLFDVDGTLTQP----------RQ-----------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNK   52 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~----------~~-----------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~   52 (175)
                      ..-+++||+|+|+|++          ..                 +.-+.+++. .+.++++ +.++++|||+-..
T Consensus       100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~l-y~~l~~~G~kIf~VSgR~e~~  174 (275)
T TIGR01680       100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKN-YNKLVSLGFKIIFLSGRLKDK  174 (275)
T ss_pred             CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHH-HHHHHHCCCEEEEEeCCchhH
Confidence            4578999999999931          01                 122455666 8888888 9999999998643

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=96.05  E-value=0.0038  Score=46.64  Aligned_cols=16  Identities=44%  Similarity=0.688  Sum_probs=14.5

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|+|+||+||||++.+
T Consensus         4 ~k~viFD~DGTLid~~   19 (201)
T TIGR01491         4 IKLIIFDLDGTLTDVM   19 (201)
T ss_pred             ceEEEEeCCCCCcCCc
Confidence            7899999999999864

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>PHA02597 30

Probab=96.04  E-value=0.0029  Score=47.44  Aligned_cols=16  Identities=38%  Similarity=0.414  Sum_probs=14.3

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|+|+|||||||++..
T Consensus         2 ~k~viFDlDGTLiD~~   17 (197)
T PHA02597          2 KPTILTDVDGVLLSWQ   17 (197)
T ss_pred             CcEEEEecCCceEchh
Confidence            6899999999999944

2 hypothetical protein; Provisional

>PRK09449 dUMP phosphatase; Provisional

Probab=95.97  E-value=0.0067  Score=46.34  Aligned_cols=17  Identities=35%  Similarity=0.323  Sum_probs=14.6

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      .+|.|+||+||||++.+
T Consensus         2 ~~k~iiFDlDGTLid~~   18 (224)
T PRK09449          2 KYDWILFDADETLFHFD   18 (224)
T ss_pred             CccEEEEcCCCchhcch
Confidence            47999999999999743

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=95.87  E-value=0.028  Score=41.22  Aligned_cols=54  Identities=20%  Similarity=0.214  Sum_probs=39.8

Q ss_pred             ceEEEEecCCCccCCCCCC------------------------CHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          6 NTICLFDVDGTLTQPRQKA------------------------QNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i------------------------~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      ++.+++|||+||+.+....                        =|...+. |+++.+...++|.|..+..-+...+..+
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eF-L~~l~~~yei~I~Ts~~~~yA~~il~~l   78 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEF-LERVSKWYELVIFTASLEEYADPVLDIL   78 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHH-HHHHHhcCEEEEEcCCcHHHHHHHHHHH
Confidence            4689999999999865422                        2345677 9999877888888887777666666554

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=95.84  E-value=0.0036  Score=53.38  Aligned_cols=30  Identities=30%  Similarity=0.338  Sum_probs=25.4

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|.|.|||||||+++...+.....++ ++++
T Consensus       241 ~k~vIFDlDGTLiDs~~~~~~a~~~~-~~~~  270 (459)
T PRK06698        241 LQALIFDMDGTLFQTDKILELSLDDT-FDHL  270 (459)
T ss_pred             hhheeEccCCceecchhHHHHHHHHH-HHHH
Confidence            47899999999999988777777777 7776

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=95.83  E-value=0.024  Score=43.01  Aligned_cols=56  Identities=18%  Similarity=0.189  Sum_probs=40.6

Q ss_pred             CcceEEEEecCCCccCCCC-------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ-------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      .++|++++||||||++...       -.=|..-+. |+.+.+...++|=|..+..-+...+..+
T Consensus        19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eF-L~~~~~~feIvVwTAa~~~ya~~~l~~l   81 (195)
T TIGR02245        19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEF-LTSAYEDYDIVIWSATSMKWIEIKMTEL   81 (195)
T ss_pred             CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHH-HHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence            3678999999999997531       233556666 9999988777887777766666655543

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=95.74  E-value=0.025  Score=48.19  Aligned_cols=60  Identities=22%  Similarity=0.278  Sum_probs=46.0

Q ss_pred             CCCCcceEEEEecCCCccC----CCC----CCC-----H--HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCC
Q psy16481          1 MTCRANTICLFDVDGTLTQ----PRQ----KAQ-----N--ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~----~~~----~i~-----~--~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      |+.+.+|.+++|||+||..    +++    +++     +  .+++-.|+.|.++ +..++||=+....+.+.|...
T Consensus       217 ~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~kh  292 (574)
T COG3882         217 MSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKH  292 (574)
T ss_pred             hhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhC
Confidence            6778899999999999987    221    444     1  2333338889999 999999999999998887653

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=95.71  E-value=0.0032  Score=47.56  Aligned_cols=27  Identities=33%  Similarity=0.420  Sum_probs=18.6

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |+||+||||+++...+.+...++ +++.
T Consensus         1 viFD~DGTL~Ds~~~~~~~~~~~-~~~~   27 (213)
T TIGR01449         1 VLFDLDGTLVDSAPDIAAAVNMA-LAAL   27 (213)
T ss_pred             CeecCCCccccCHHHHHHHHHHH-HHHC
Confidence            58999999999865454444444 5544

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=95.64  E-value=0.0037  Score=44.85  Aligned_cols=28  Identities=29%  Similarity=0.450  Sum_probs=18.9

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|.||+||||+++..-+.....++ +++.
T Consensus         1 ~iifD~DGTL~d~~~~~~~~~~~~-~~~~   28 (154)
T TIGR01549         1 AILFDIDGTLVDSSFAIRRAFEET-LEEF   28 (154)
T ss_pred             CeEecCCCcccccHHHHHHHHHHH-HHHh
Confidence            489999999999865444444444 5544

HAD subfamilies caused by an overly broad single model.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=95.63  E-value=0.0035  Score=47.33  Aligned_cols=26  Identities=19%  Similarity=0.295  Sum_probs=19.1

Q ss_pred             EEEecCCCccCCCCCCCHHHHHHHHHh
Q psy16481          9 CLFDVDGTLTQPRQKAQNETLDFLLKK   35 (175)
Q Consensus         9 i~~DlDGTLl~~~~~i~~~~~~~~l~~   35 (175)
                      |+|||||||+++...+-....++ +++
T Consensus         1 iiFDlDGTL~Ds~~~~~~~~~~~-~~~   26 (205)
T TIGR01454         1 VVFDLDGVLVDSFAVMREAFAIA-YRE   26 (205)
T ss_pred             CeecCcCccccCHHHHHHHHHHH-HHH
Confidence            58999999999876555555555 554

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=95.50  E-value=0.0056  Score=45.12  Aligned_cols=17  Identities=29%  Similarity=0.614  Sum_probs=14.0

Q ss_pred             EEEEecCCCccCCCCCC
Q psy16481          8 ICLFDVDGTLTQPRQKA   24 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i   24 (175)
                      +|+||+||||+++....
T Consensus         1 ~iiFD~DGTL~ds~~~~   17 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYH   17 (185)
T ss_pred             CeEEcCCCccccChHHH
Confidence            48999999999987533

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=95.36  E-value=0.039  Score=40.32  Aligned_cols=57  Identities=14%  Similarity=0.088  Sum_probs=39.3

Q ss_pred             CCcceEEEEecCCCccCCCCC--C---------------------------------CHHHHHHHHHhhCCCeEEEEEcC
Q psy16481          3 CRANTICLFDVDGTLTQPRQK--A---------------------------------QNETLDFLLKKLKPLSHLAIVSG   47 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~--i---------------------------------~~~~~~~~l~~l~~~i~~~iaTG   47 (175)
                      ..+++.+++|||.||+.+...  .                                 -|...+. |+++++.+.++|+|.
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~ef-L~~l~~~yel~I~T~   81 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEF-LKEASKLYEMHVYTM   81 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHH-HHHHHhhcEEEEEeC
Confidence            356788999999999995431  1                                 1345566 888875577888877


Q ss_pred             CCHHHHHHHhcCC
Q psy16481         48 SDMNKVAEQLGGE   60 (175)
Q Consensus        48 R~~~~~~~~~~~~   60 (175)
                      .+..-+...++.+
T Consensus        82 ~~~~yA~~vl~~l   94 (156)
T TIGR02250        82 GTRAYAQAIAKLI   94 (156)
T ss_pred             CcHHHHHHHHHHh
Confidence            7776665555543

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=95.34  E-value=0.0054  Score=44.96  Aligned_cols=15  Identities=40%  Similarity=0.538  Sum_probs=13.0

Q ss_pred             EEEEecCCCccCCCC
Q psy16481          8 ICLFDVDGTLTQPRQ   22 (175)
Q Consensus         8 li~~DlDGTLl~~~~   22 (175)
                      +|+||+||||+++..
T Consensus         1 ~viFD~DGTL~D~~~   15 (175)
T TIGR01493         1 AMVFDVYGTLVDVHG   15 (175)
T ss_pred             CeEEecCCcCcccHH
Confidence            479999999999874

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=95.16  E-value=0.019  Score=46.85  Aligned_cols=26  Identities=35%  Similarity=0.466  Sum_probs=18.9

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      ++.|+|+|||||||+      ..+..+. +.+.
T Consensus       108 ~~~~LvvfDmDGTLI------~~e~i~e-ia~~  133 (322)
T PRK11133        108 RTPGLLVMDMDSTAI------QIECIDE-IAKL  133 (322)
T ss_pred             cCCCEEEEECCCCCc------chHHHHH-HHHH
Confidence            468999999999997      4455555 4443

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=95.16  E-value=0.012  Score=45.09  Aligned_cols=18  Identities=50%  Similarity=0.743  Sum_probs=15.8

Q ss_pred             cceEEEEecCCCccCCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ   22 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~   22 (175)
                      .+|+.+||+||||++.+.
T Consensus         4 ~~~la~FDfDgTLt~~ds   21 (210)
T TIGR01545         4 AKRIIFFDLDGTLHQQDM   21 (210)
T ss_pred             cCcEEEEcCCCCCccCcc
Confidence            578999999999999764

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=94.94  E-value=0.0099  Score=44.62  Aligned_cols=30  Identities=30%  Similarity=0.349  Sum_probs=22.3

Q ss_pred             ceEEEEecCCCccCCCCCC----CHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKA----QNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i----~~~~~~~~l~~l   36 (175)
                      ++.|+||.||||+..+..+    .....+. +.++
T Consensus         1 i~~i~fDktGTLt~~~~~v~~~~~~~~~~~-~~~~   34 (215)
T PF00702_consen    1 IDAICFDKTGTLTQGKMSVAPPSNEAALAI-AAAL   34 (215)
T ss_dssp             ESEEEEECCTTTBESHHEEESCSHHHHHHH-HHHH
T ss_pred             CeEEEEecCCCcccCeEEEEeccHHHHHHH-HHHh
Confidence            4789999999999988877    4444444 5544

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=94.93  E-value=0.015  Score=43.98  Aligned_cols=16  Identities=25%  Similarity=0.414  Sum_probs=14.4

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|.|+|||||||+++.
T Consensus         2 ik~viFDldGtL~d~~   17 (211)
T TIGR02247         2 IKAVIFDFGGVLLPSP   17 (211)
T ss_pred             ceEEEEecCCceecCH
Confidence            6899999999999974

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=94.48  E-value=0.017  Score=54.18  Aligned_cols=33  Identities=21%  Similarity=0.471  Sum_probs=23.4

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +.++|+|+|||||||+++.....+...++ +++.
T Consensus        72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~~-~~~~  104 (1057)
T PLN02919         72 WGKVSAVLFDMDGVLCNSEEPSRRAAVDV-FAEM  104 (1057)
T ss_pred             CCCCCEEEECCCCCeEeChHHHHHHHHHH-HHHc
Confidence            45789999999999999865444444444 5543

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=94.39  E-value=0.04  Score=41.92  Aligned_cols=21  Identities=33%  Similarity=0.362  Sum_probs=17.5

Q ss_pred             CCcceEEEEecCCCccCCCCC
Q psy16481          3 CRANTICLFDVDGTLTQPRQK   23 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~   23 (175)
                      +..+|.|+||+||||++....
T Consensus         1 ~~~~k~i~FD~d~TL~d~~~~   21 (229)
T COG1011           1 MMMIKAILFDLDGTLLDFDSA   21 (229)
T ss_pred             CCceeEEEEecCCcccccchH
Confidence            356899999999999997653

>KOG1615|consensus

Probab=94.24  E-value=0.051  Score=41.12  Aligned_cols=40  Identities=8%  Similarity=0.096  Sum_probs=31.6

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL   63 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~   63 (175)
                      ++++..++. ..+|+++ .+++++||.-.+.+.+..+.+|++
T Consensus        88 ~lT~Gi~eL-v~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~  128 (227)
T KOG1615|consen   88 TLTPGIREL-VSRLHARGTQVYLISGGFRQLIEPVAEQLGIP  128 (227)
T ss_pred             ccCCCHHHH-HHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc
Confidence            456667777 8899999 999999999888777777777653

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=94.07  E-value=0.047  Score=38.74  Aligned_cols=53  Identities=15%  Similarity=0.064  Sum_probs=44.2

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .-+-++++|+.... ++-+++.+. |++|.+.++++||||-.+.++.++++..|+
T Consensus        16 ~~~~~v~~tiatgG-klf~ev~e~-iqeL~d~V~i~IASgDr~gsl~~lae~~gi   68 (152)
T COG4087          16 SKAGKVLYTIATGG-KLFSEVSET-IQELHDMVDIYIASGDRKGSLVQLAEFVGI   68 (152)
T ss_pred             eecceEEEEEccCc-EEcHhhHHH-HHHHHHhheEEEecCCcchHHHHHHHHcCC
Confidence            34678899997765 466788999 999999999999999999999888777654

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=93.84  E-value=0.17  Score=38.05  Aligned_cols=36  Identities=14%  Similarity=0.080  Sum_probs=29.2

Q ss_pred             CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCC
Q psy16481         24 AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus        24 i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      |+|..++. ++..+++ +.|+++||.+-.-+.++++..
T Consensus        74 Idp~fKef-~e~ike~di~fiVvSsGm~~fI~~lfe~i  110 (220)
T COG4359          74 IDPGFKEF-VEWIKEHDIPFIVVSSGMDPFIYPLFEGI  110 (220)
T ss_pred             cCccHHHH-HHHHHHcCCCEEEEeCCCchHHHHHHHhh
Confidence            55556666 7788889 999999999999888888764

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=93.78  E-value=0.03  Score=42.65  Aligned_cols=36  Identities=11%  Similarity=0.109  Sum_probs=26.5

Q ss_pred             HHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         26 NETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        26 ~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      |...+. |+.++++.+++|+||.....+.+.++.+|+
T Consensus        71 pga~el-l~~lk~~~~~~IVS~~~~~~~~~il~~lgi  106 (203)
T TIGR02137        71 EGAVEF-VDWLRERFQVVILSDTFYEFSQPLMRQLGF  106 (203)
T ss_pred             ccHHHH-HHHHHhCCeEEEEeCChHHHHHHHHHHcCC
Confidence            334445 666666678999999988888888877765

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=93.58  E-value=0.032  Score=41.78  Aligned_cols=14  Identities=50%  Similarity=0.864  Sum_probs=12.1

Q ss_pred             EEEEecCCCccCCC
Q psy16481          8 ICLFDVDGTLTQPR   21 (175)
Q Consensus         8 li~~DlDGTLl~~~   21 (175)
                      +++||+||||++.+
T Consensus         1 ~a~FD~DgTL~~~~   14 (202)
T TIGR01490         1 LAFFDFDGTLTAKD   14 (202)
T ss_pred             CeEEccCCCCCCCc
Confidence            47999999999965

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=93.25  E-value=0.19  Score=41.76  Aligned_cols=48  Identities=21%  Similarity=0.236  Sum_probs=37.7

Q ss_pred             cceEEEEecCCCccCCCCCC--CHHHHHHHHHhhCCCeEEEEEcCCCHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKA--QNETLDFLLKKLKPLSHLAIVSGSDMNK   52 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i--~~~~~~~~l~~l~~~i~~~iaTGR~~~~   52 (175)
                      +-|||-||=|+||..+.+.+  +......+|+.|+..+.|.|+|.=.|..
T Consensus       146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~  195 (408)
T PF06437_consen  146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPG  195 (408)
T ss_pred             CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCeEEEEeCCCCCC
Confidence            67999999999999999877  6667777455555558888888766654

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=93.10  E-value=0.041  Score=40.58  Aligned_cols=30  Identities=23%  Similarity=0.238  Sum_probs=19.9

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      |+.++++ +.++|+||.+...+...+..+++
T Consensus        98 i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i  128 (192)
T PF12710_consen   98 IRELKDNGIKVVIVSGSPDEIIEPIAERLGI  128 (192)
T ss_dssp             HHHHHHTTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred             HHHHHHCCCEEEEECCCcHHHHHHHHHHcCC
Confidence            5555566 88888888877666666655443

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=93.08  E-value=0.12  Score=43.66  Aligned_cols=48  Identities=15%  Similarity=0.290  Sum_probs=32.5

Q ss_pred             cceEEEEecCCCccCCCCC--C---------CHHHHHHHHHhhCCC-eEEEEEcCCCHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQK--A---------QNETLDFLLKKLKPL-SHLAIVSGSDMNKV   53 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~--i---------~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~   53 (175)
                      ..|.|++|||||++.++--  +         +...... .-....+ +.+.--|.|++-.+
T Consensus       374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkL-YtdI~rNGYkI~YltsR~~Gqa  433 (580)
T COG5083         374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKL-YTDIDRNGYKIKYLTSRSYGQA  433 (580)
T ss_pred             CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhh-hhhhccCceEEEEEecccccch
Confidence            5789999999999987631  1         1112222 3444446 78888999998765

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=92.50  E-value=0.043  Score=40.08  Aligned_cols=15  Identities=40%  Similarity=0.709  Sum_probs=12.6

Q ss_pred             EEEEecCCCccCCCC
Q psy16481          8 ICLFDVDGTLTQPRQ   22 (175)
Q Consensus         8 li~~DlDGTLl~~~~   22 (175)
                      .|+|||||||++.+.
T Consensus         1 ~vlFDlDgtLv~~~~   15 (183)
T TIGR01509         1 AILFDLDGVLVDTSS   15 (183)
T ss_pred             CeeeccCCceechHH
Confidence            379999999999754

HAD subfamilies caused by an overly broad single model.

>KOG3109|consensus

Probab=92.01  E-value=0.19  Score=38.72  Aligned_cols=27  Identities=22%  Similarity=0.143  Sum_probs=23.8

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDF   31 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~   31 (175)
                      .++.++||+|.||.+....|....++.
T Consensus        14 ~~~~l~FDiDdtLYp~St~i~~~~~~n   40 (244)
T KOG3109|consen   14 NYKCLFFDIDDTLYPLSTGIQLMMRNN   40 (244)
T ss_pred             cceEEEEecccccccCchhHHHHHHHH
Confidence            589999999999999888888887766

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=91.88  E-value=0.095  Score=39.34  Aligned_cols=15  Identities=13%  Similarity=0.430  Sum_probs=13.1

Q ss_pred             eEEEEecCCCccCCC
Q psy16481          7 TICLFDVDGTLTQPR   21 (175)
Q Consensus         7 kli~~DlDGTLl~~~   21 (175)
                      .+|+|||||||++.+
T Consensus         1 ~~viFDldgvL~d~~   15 (199)
T PRK09456          1 MLYIFDLGNVIVDID   15 (199)
T ss_pred             CEEEEeCCCccccCc
Confidence            379999999999864

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=91.72  E-value=0.077  Score=37.99  Aligned_cols=14  Identities=43%  Similarity=0.797  Sum_probs=11.5

Q ss_pred             EEEecCCCccCCCC
Q psy16481          9 CLFDVDGTLTQPRQ   22 (175)
Q Consensus         9 i~~DlDGTLl~~~~   22 (175)
                      |+||+||||++...
T Consensus         1 iifD~dgtL~d~~~   14 (176)
T PF13419_consen    1 IIFDLDGTLVDTDP   14 (176)
T ss_dssp             EEEESBTTTEEHHH
T ss_pred             cEEECCCCcEeCHH
Confidence            68999999998654

...

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=91.64  E-value=0.13  Score=44.48  Aligned_cols=21  Identities=33%  Similarity=0.387  Sum_probs=17.1

Q ss_pred             cceEEEEecCCCccCCCCCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQ   25 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~   25 (175)
                      ..+.++||+||||+.++...+
T Consensus        21 ~~~~~~FDfDGTLt~~~s~f~   41 (497)
T PLN02177         21 SNQTVAADLDGTLLISRSAFP   41 (497)
T ss_pred             cccEEEEecCCcccCCCCccH
Confidence            357899999999999776555

>KOG2116|consensus

Probab=91.32  E-value=0.2  Score=44.20  Aligned_cols=47  Identities=19%  Similarity=0.357  Sum_probs=37.1

Q ss_pred             ceEEEEecCCCccCCCC--CC---------CHHHHHHHHHhhCCC-eEEEEEcCCCHHHH
Q psy16481          6 NTICLFDVDGTLTQPRQ--KA---------QNETLDFLLKKLKPL-SHLAIVSGSDMNKV   53 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~--~i---------~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~   53 (175)
                      -|+|++|+|||++.++-  ++         .....+. ..+..++ ++++.+|.|..-.+
T Consensus       530 ~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkL-yt~Ik~NGYk~lyLSARaIgQA  588 (738)
T KOG2116|consen  530 DKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKL-YTKIKENGYKILYLSARAIGQA  588 (738)
T ss_pred             CcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHH-HHHHHhCCeeEEEEehhhhhhh
Confidence            48999999999999872  33         2234455 8888999 99999999998764

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=91.09  E-value=0.13  Score=38.56  Aligned_cols=15  Identities=33%  Similarity=0.532  Sum_probs=11.0

Q ss_pred             ceE-EEEecCCCccCC
Q psy16481          6 NTI-CLFDVDGTLTQP   20 (175)
Q Consensus         6 ~kl-i~~DlDGTLl~~   20 (175)
                      +|+ |++||||||.+.
T Consensus         1 ~~i~I~iDiDgVLad~   16 (191)
T PF06941_consen    1 RKIRIAIDIDGVLADF   16 (191)
T ss_dssp             --EEEEEESBTTTB-H
T ss_pred             CCcEEEEECCCCCccc
Confidence            478 999999999884

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=90.97  E-value=0.24  Score=42.65  Aligned_cols=25  Identities=16%  Similarity=0.166  Sum_probs=21.3

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETL   29 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~   29 (175)
                      ..+.+++|+|||||.+...++.-.+
T Consensus         7 ~~~~~~fD~DGTLlrs~ssFpyFml   31 (498)
T PLN02499          7 TSYSVVSELEGTLLKDADPFSYFML   31 (498)
T ss_pred             ccceEEEecccceecCCCccHHHHH
Confidence            5578999999999998778887777

>KOG1618|consensus

Probab=89.66  E-value=0.5  Score=38.53  Aligned_cols=46  Identities=20%  Similarity=0.298  Sum_probs=34.1

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-----eEEEEEc--CCCHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-----SHLAIVS--GSDMNK   52 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-----i~~~iaT--GR~~~~   52 (175)
                      +.=-+|||+||.|+...+.|. ...+| ++.|.++     |.|++.|  |...++
T Consensus        34 ~~fgfafDIDGVL~RG~~~i~-~~~~A-lr~L~~~~g~lkIP~vfLTNGGg~~E~   86 (389)
T KOG1618|consen   34 PTFGFAFDIDGVLFRGHRPIP-GALKA-LRRLVDNQGQLKIPFVFLTNGGGILES   86 (389)
T ss_pred             CceeEEEecccEEEecCCCCc-chHHH-HHHHHhcCCCeeccEEEEeCCCCcchh
Confidence            445699999999999877665 55688 8888774     7778777  444443

>KOG2134|consensus

Probab=89.36  E-value=0.35  Score=40.28  Aligned_cols=41  Identities=32%  Similarity=0.340  Sum_probs=30.3

Q ss_pred             cceEEEEecCCCccCCCC------------CCCHHHHHHHHHhhCCC-eEEEEEc
Q psy16481          5 ANTICLFDVDGTLTQPRQ------------KAQNETLDFLLKKLKPL-SHLAIVS   46 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~------------~i~~~~~~~~l~~l~~~-i~~~iaT   46 (175)
                      .-|.++|||||||++.+.            -+-++.-.- |+.+.+. +.++|.|
T Consensus        74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~K-lktl~~~g~~l~ift  127 (422)
T KOG2134|consen   74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSK-LKTLYQDGIKLFIFT  127 (422)
T ss_pred             CcceEEEecCCceeecCCcceeeccCccceeeccccchh-hhhhccCCeEEEEEe
Confidence            458999999999998432            334445566 8888888 8888876

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=89.13  E-value=0.19  Score=38.23  Aligned_cols=28  Identities=18%  Similarity=0.067  Sum_probs=20.4

Q ss_pred             HHhhCCC-eEEEEEcCCCHHHHHHHhcCC
Q psy16481         33 LKKLKPL-SHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus        33 l~~l~~~-i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      |+.++++ +.++|+||.....+...++.+
T Consensus        79 l~~l~~~g~~~~IvS~~~~~~i~~il~~~  107 (214)
T TIGR03333        79 VAFINEHGIPFYVISGGMDFFVYPLLEGI  107 (214)
T ss_pred             HHHHHHCCCeEEEECCCcHHHHHHHHHhh
Confidence            5666666 888899988877776666553

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=88.36  E-value=0.64  Score=34.87  Aligned_cols=48  Identities=21%  Similarity=0.231  Sum_probs=37.2

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+-+...+. |++|+++ ++++++||++...+...++..++...++.+++
T Consensus        75 ~~~~g~~~~-L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~  123 (205)
T TIGR01454        75 EVFPGVPEL-LAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIG  123 (205)
T ss_pred             ccCCCHHHH-HHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEe
Confidence            567788898 9999998 99999999998888777777665433444443

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>KOG3120|consensus

Probab=87.91  E-value=0.93  Score=35.14  Aligned_cols=37  Identities=22%  Similarity=0.219  Sum_probs=24.9

Q ss_pred             CHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         25 QNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        25 ~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +|...++ |+.+.+.  ..+.|+|--.-..+.+.++..++
T Consensus        86 ~Pgmv~l-ik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~  124 (256)
T KOG3120|consen   86 VPGMVRL-IKSAAKLGCFELIIVSDANSFFIEEILEAAGI  124 (256)
T ss_pred             CccHHHH-HHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence            3445566 7776666  57888887777777777766654

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=87.35  E-value=0.88  Score=34.10  Aligned_cols=48  Identities=13%  Similarity=0.045  Sum_probs=36.9

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ++-+...+. |+.|+++ ++++++|+.+...+...++..++...++.+++
T Consensus        85 ~~~~g~~~~-L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~  133 (213)
T TIGR01449        85 SVFPGVEAT-LGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIG  133 (213)
T ss_pred             ccCCCHHHH-HHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEe
Confidence            566788888 9999998 99999999998888888877665444444443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=87.33  E-value=1  Score=39.64  Aligned_cols=57  Identities=16%  Similarity=0.235  Sum_probs=48.1

Q ss_pred             cceEEEEecCCCccCC---CCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQP---RQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~---~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ....+.++.||+++.-   ..++-+...++ |++|+++ ++++++||.....+....+.+|+
T Consensus       384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~-i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi  444 (562)
T TIGR01511       384 GSTSVLVAVNGELAGVFALEDQLRPEAKEV-IQALKRRGIEPVMLTGDNRKTAKAVAKELGI  444 (562)
T ss_pred             CCEEEEEEECCEEEEEEEecccccHHHHHH-HHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence            4577889999998662   45788999999 9999999 99999999999988888877653

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=86.43  E-value=1  Score=34.01  Aligned_cols=48  Identities=25%  Similarity=0.196  Sum_probs=36.5

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ++-+...+. |++|+++ ++++++|+.....+...++.+++...++.+++
T Consensus        94 ~~~~g~~~~-L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~  142 (221)
T TIGR02253        94 RVYPGVRDT-LMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVIT  142 (221)
T ss_pred             CCCCCHHHH-HHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEE
Confidence            466788888 9999998 99999999988777777777665444444443

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=86.37  E-value=1.2  Score=34.76  Aligned_cols=48  Identities=15%  Similarity=0.050  Sum_probs=37.9

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+-|...+. |+.|+++ ++++|+|+.+...+...++.+++...++.+++
T Consensus       108 ~l~pgv~e~-L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~  156 (248)
T PLN02770        108 KPLNGLYKL-KKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVII  156 (248)
T ss_pred             CcCccHHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEe
Confidence            455678888 9999998 99999999999988888877766544555554

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=86.26  E-value=1.1  Score=33.44  Aligned_cols=42  Identities=19%  Similarity=0.203  Sum_probs=32.1

Q ss_pred             HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         29 LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        29 ~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+. |+.|+++ ++++|+||++...+...++..|+...++.+++
T Consensus       112 ~~~-L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~  154 (197)
T TIGR01548       112 KGL-LRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW  154 (197)
T ss_pred             HHH-HHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe
Confidence            677 8889888 99999999999988888877765443443433

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>KOG3040|consensus

Probab=85.44  E-value=1.4  Score=33.94  Aligned_cols=57  Identities=23%  Similarity=0.280  Sum_probs=39.8

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCC
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEK   61 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~   61 (175)
                      +..+|-+.+|+-|||-.++-.++ ...+| +++|+.+ .++=++|   +.+...+...+..+|
T Consensus         4 ~~~v~gvLlDlSGtLh~e~~avp-ga~eA-l~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlg   64 (262)
T KOG3040|consen    4 GRAVKGVLLDLSGTLHIEDAAVP-GAVEA-LKRLRDQHVKVKFVTNTTKESKRNLHERLQRLG   64 (262)
T ss_pred             ccccceEEEeccceEecccccCC-CHHHH-HHHHHhcCceEEEEecCcchhHHHHHHHHHHhC
Confidence            46789999999999999887664 66899 9999966 5555554   444444444444433

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=85.21  E-value=0.74  Score=32.75  Aligned_cols=48  Identities=21%  Similarity=0.277  Sum_probs=37.2

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ++.+...+. |++|+++ ++++++|+.+...+...+..+++...++.+++
T Consensus        77 ~~~~~~~~~-L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~  125 (176)
T PF13419_consen   77 QPYPGVREL-LERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIIS  125 (176)
T ss_dssp             EESTTHHHH-HHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEE
T ss_pred             chhhhhhhh-hhhcccccceeEEeecCCcccccccccccccccccccccc
Confidence            566788888 9999978 99999999999888888877665433444443

...

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=85.13  E-value=1.1  Score=33.88  Aligned_cols=48  Identities=17%  Similarity=0.151  Sum_probs=37.1

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc--cccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL--EQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~--~~~~~~i~   71 (175)
                      ++-+...+. |+.|+++ +.++|+||.....+...++.+++.  ..++.+++
T Consensus        87 ~l~~G~~~~-L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~  137 (220)
T TIGR03351        87 VALPGAEEA-FRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVC  137 (220)
T ss_pred             ccCCCHHHH-HHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEc
Confidence            577788888 9999998 999999999999887777766543  33444544

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>KOG2914|consensus

Probab=84.61  E-value=0.49  Score=36.65  Aligned_cols=52  Identities=21%  Similarity=0.319  Sum_probs=36.1

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC---eEEEEEcCCCHHHHHHHh
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL---SHLAIVSGSDMNKVAEQL   57 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~---i~~~iaTGR~~~~~~~~~   57 (175)
                      ..-.+.||+||||++++.-..+.+.+. +++..+.   ......=|+....+...+
T Consensus         9 ~~~~~lfD~dG~lvdte~~y~~~~~~~-~~~ygk~~~~~~~~~~mG~~~~eaa~~~   63 (222)
T KOG2914|consen    9 KVSACLFDMDGTLVDTEDLYTEAWQEL-LDRYGKPYPWDVKVKSMGKRTSEAARLF   63 (222)
T ss_pred             ceeeEEEecCCcEEecHHHHHHHHHHH-HHHcCCCChHHHHHHHcCCCHHHHHHHH
Confidence            457899999999999887777777776 8888864   223334466666554443

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=84.37  E-value=5.1  Score=29.71  Aligned_cols=39  Identities=18%  Similarity=0.011  Sum_probs=32.2

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+-+...+. |+.++++ ++++++||.+...+...++.+++
T Consensus        87 ~~~~~~~~~-l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~  126 (202)
T TIGR01490        87 ILYPEARDL-IRWHKAEGHTIVLVSASLTILVKPLARILGI  126 (202)
T ss_pred             hccHHHHHH-HHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC
Confidence            467788888 9999988 99999999998878777776654

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=84.20  E-value=1.4  Score=33.59  Aligned_cols=47  Identities=19%  Similarity=0.213  Sum_probs=37.7

Q ss_pred             CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         24 AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        24 i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .=+...++ |.+|+++ ++.+|+|+++...+...++.+|+...++.+++
T Consensus        90 ~~~gv~e~-L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g  137 (220)
T COG0546          90 LFPGVKEL-LAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG  137 (220)
T ss_pred             cCCCHHHH-HHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc
Confidence            44567888 9999999 99999999999999988887776554544444

>PRK11590 hypothetical protein; Provisional

Probab=84.08  E-value=4.7  Score=30.52  Aligned_cols=74  Identities=12%  Similarity=0.090  Sum_probs=48.1

Q ss_pred             CHHHHHHHH-HhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEeeccchhhhhCHHHHHHHH
Q psy16481         25 QNETLDFLL-KKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFI  102 (175)
Q Consensus        25 ~~~~~~~~l-~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i~~~~l~~~l~~~~~~~i~  102 (175)
                      -|...+. | +.++++ +.++||||.+...+.+.+..+++. ..+.+||.. -.+..+|+..-....    .++.+.++-
T Consensus        97 ~pga~e~-L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~-~~~~~i~t~-l~~~~tg~~~g~~c~----g~~K~~~l~  169 (211)
T PRK11590         97 FPVVQER-LTTYLLSSDADVWLITGSPQPLVEQVYFDTPWL-PRVNLIASQ-MQRRYGGWVLTLRCL----GHEKVAQLE  169 (211)
T ss_pred             CccHHHH-HHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccc-ccCceEEEE-EEEEEccEECCccCC----ChHHHHHHH
Confidence            4677888 8 567777 999999999988887777665421 123566533 222335665444444    677788876


Q ss_pred             HHH
Q psy16481        103 NYC  105 (175)
Q Consensus       103 ~~~  105 (175)
                      +++
T Consensus       170 ~~~  172 (211)
T PRK11590        170 RKI  172 (211)
T ss_pred             HHh
Confidence            665

>PF09047 MEF2_binding: MEF2 binding; InterPro: IPR015134 The myocyte enhancer factor-2 (MEF2) binding domain, predominantly found in the calcineurin-binding protein CABIN 1, adopts an amphipathic alpha-helical structure, which allows it to bind a hydrophobic groove on the MEF2S domain, forming a triple-helical interaction

Probab=83.54  E-value=1  Score=23.54  Aligned_cols=19  Identities=37%  Similarity=0.422  Sum_probs=9.6

Q ss_pred             CccCCCCCCCHHHHHHHHHh
Q psy16481         16 TLTQPRQKAQNETLDFLLKK   35 (175)
Q Consensus        16 TLl~~~~~i~~~~~~~~l~~   35 (175)
                      |||.+++.||+++++. |+.
T Consensus         1 tllspkgsiseetkqk-lk~   19 (35)
T PF09047_consen    1 TLLSPKGSISEETKQK-LKS   19 (35)
T ss_dssp             -----SS---HHHHHH-HHH
T ss_pred             CccCCCCcccHHHHHH-HHH
Confidence            7899999999999998 775

Interaction of this domain with MEF2 causes repression of transcription []. ; PDB: 1N6J_G.

>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function

Probab=83.53  E-value=1.5  Score=31.36  Aligned_cols=46  Identities=13%  Similarity=0.317  Sum_probs=32.8

Q ss_pred             eEEEEecCCCccC--CCCCCCHHHHHHHHHhhCCC-eEEEEEcCC--CHHHHHH
Q psy16481          7 TICLFDVDGTLTQ--PRQKAQNETLDFLLKKLKPL-SHLAIVSGS--DMNKVAE   55 (175)
Q Consensus         7 kli~~DlDGTLl~--~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR--~~~~~~~   55 (175)
                      -+-++||||.++.  +.+.++..  +. ++.+.+. ..+++||=-  ++..+.+
T Consensus        44 giAildL~G~~l~l~S~R~~~~~--ev-i~~I~~~G~PviVAtDV~p~P~~V~K   94 (138)
T PF04312_consen   44 GIAILDLDGELLDLKSSRNMSRS--EV-IEWISEYGKPVIVATDVSPPPETVKK   94 (138)
T ss_pred             EEEEEecCCcEEEEEeecCCCHH--HH-HHHHHHcCCEEEEEecCCCCcHHHHH
Confidence            4568999999987  55677654  55 8888888 889999853  3334443

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=83.46  E-value=2.2  Score=32.42  Aligned_cols=49  Identities=14%  Similarity=0.099  Sum_probs=37.6

Q ss_pred             CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         22 QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        22 ~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ..+-+.+.+. |+.|+++ ++++++||.+...+...++.+++...++.+++
T Consensus        91 ~~~~~g~~~~-l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~  140 (222)
T PRK10826         91 RPLLPGVREA-LALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALAS  140 (222)
T ss_pred             CCCCCCHHHH-HHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEE
Confidence            3566788898 9999999 99999999998888777777665444444443

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=81.82  E-value=2.5  Score=31.76  Aligned_cols=47  Identities=19%  Similarity=0.241  Sum_probs=31.3

Q ss_pred             eEEEEecCCCccCCC-------C--------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHH
Q psy16481          7 TICLFDVDGTLTQPR-------Q--------------------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNK   52 (175)
Q Consensus         7 kli~~DlDGTLl~~~-------~--------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~   52 (175)
                      -.|-||+|.|+|-+.       +                          .|+.+....+|.-.+.+ -.++++|||....
T Consensus        64 i~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk  143 (237)
T COG3700          64 IAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGK  143 (237)
T ss_pred             eeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence            457899999998632       1                          34444444424444455 8899999999875


Q ss_pred             H
Q psy16481         53 V   53 (175)
Q Consensus        53 ~   53 (175)
                      .
T Consensus       144 ~  144 (237)
T COG3700         144 T  144 (237)
T ss_pred             c
Confidence            4

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=81.81  E-value=1.7  Score=31.70  Aligned_cols=46  Identities=22%  Similarity=0.255  Sum_probs=32.7

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+-+...+. |+.|+++ +.++++|++  ..+...++..++...++.+++
T Consensus        88 ~~~~g~~~~-l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~  134 (185)
T TIGR02009        88 EVLPGIENF-LKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVD  134 (185)
T ss_pred             CCCcCHHHH-HHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeee
Confidence            566778888 9999998 999999998  445556666554433444443

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>KOG3085|consensus

Probab=81.38  E-value=2.1  Score=33.47  Aligned_cols=17  Identities=29%  Similarity=0.288  Sum_probs=14.9

Q ss_pred             CCcceEEEEecCCCccC
Q psy16481          3 CRANTICLFDVDGTLTQ   19 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~   19 (175)
                      ...+|+|.||++|||+.
T Consensus         4 ~~~iravtfD~~~tLl~   20 (237)
T KOG3085|consen    4 LMRIRAVTFDAGGTLLA   20 (237)
T ss_pred             ccceEEEEEeCCCceee
Confidence            45789999999999986

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=81.24  E-value=1.8  Score=33.60  Aligned_cols=39  Identities=5%  Similarity=0.066  Sum_probs=31.2

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+-+...+. |+.|+++ ++++|+||.+...+...++.+++
T Consensus        99 ~~~pg~~e~-L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl  138 (253)
T TIGR01422        99 SPIPGVIEV-IAYLRARGIKIGSTTGYTREMMDVVAPEAAL  138 (253)
T ss_pred             ccCCCHHHH-HHHHHHCCCeEEEECCCcHHHHHHHHHHHHh
Confidence            455677888 9999998 99999999999887776665443

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=81.01  E-value=1.8  Score=40.84  Aligned_cols=39  Identities=13%  Similarity=0.148  Sum_probs=34.4

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ++-+++.++ |++++++ ++++++|||++..+....+..|+
T Consensus       568 plr~~v~~a-I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi  607 (997)
T TIGR01106       568 PPRAAVPDA-VGKCRSAGIKVIMVTGDHPITAKAIAKGVGI  607 (997)
T ss_pred             CChHHHHHH-HHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence            567889999 9999999 99999999999998887777654

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=80.42  E-value=2.5  Score=33.53  Aligned_cols=48  Identities=23%  Similarity=0.203  Sum_probs=35.6

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+-+...+. |+.|+++ ++++++||.+...+...++..++...++.+++
T Consensus       101 ~~~~g~~e~-L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~  149 (272)
T PRK13223        101 VVYPGVRDT-LKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIG  149 (272)
T ss_pred             ccCCCHHHH-HHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEe
Confidence            456788898 9999998 99999999988877777766554333444443

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=80.35  E-value=2.7  Score=36.84  Aligned_cols=58  Identities=19%  Similarity=0.311  Sum_probs=48.2

Q ss_pred             CcceEEEEecCCCccCC---CCCCCHHHHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQP---RQKAQNETLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~---~~~i~~~~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +..+.+++..||+++.-   +.++-+...++ |++|+++  ++++++||.+.......++.+|+
T Consensus       362 ~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~-l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi  424 (556)
T TIGR01525       362 QGKTVVFVAVDGELLGVIALRDQLRPEAKEA-IAALKRAGGIKLVMLTGDNRSAAEAVAAELGI  424 (556)
T ss_pred             CCcEEEEEEECCEEEEEEEecccchHhHHHH-HHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence            34577889999998773   45788999999 9999875  89999999999988888887664

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
2amy_A	246	X-Ray Structure Of Human Phosphomannomutase 2 (Pmm2		3e-34
2fuc_A	262	Human Alpha-Phosphomannomutase 1 With Mg2+ Cofactor		9e-32
2i54_A	247	Phosphomannomutase From Leishmania Mexicana Length		6e-27
3f9r_A	246	Crystal Structure Of Trypanosoma Brucei Phosphomann		9e-23

>pdb|2AMY|A Chain A, X-Ray Structure Of Human Phosphomannomutase 2 (Pmm2) Length = 246

Iteration: 1
 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
            +CLFDVDGTLT PRQK   E  DFL +KL+    + +V GSD  KV EQLG + V+E++
Sbjct: 7   ALCLFDVDGTLTAPRQKITKEXDDFL-QKLRQKIKIGVVGGSDFEKVQEQLGND-VVEKY 64
Query: 67  DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
           D+VFPENGLVAYK+GKL  +++I  H+GE  IQ  INYCL +++ + LP KRG FIEFR 
Sbjct: 65  DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 124
Query: 127 GLIN 130
           G +N
Sbjct: 125 GXLN 128

>pdb|2FUC|A Chain A, Human Alpha-Phosphomannomutase 1 With Mg2+ Cofactor Bound Length = 262

Iteration: 1
 Score =  132 bits (332), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Query: 4   RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKV 62
           +   +CLFDVDGTLT  RQK   E   FL +KL+    + +V GSD  K+AEQLG G++V
Sbjct: 11  KERVLCLFDVDGTLTPARQKIDPEVAAFL-QKLRSRVQIGVVGGSDYCKIAEQLGDGDEV 69
Query: 63  LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI 122
           +E+FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL + + + LP KRG FI
Sbjct: 70  IEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYXALLRLPKKRGTFI 129
Query: 123 EFRTGLIN 130
           EFR G +N
Sbjct: 130 EFRNGXLN 137

>pdb|2I54|A Chain A, Phosphomannomutase From Leishmania Mexicana Length = 247

Iteration: 1
 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Query: 5   ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLE 64
           +  I LFDVDGTLT PR    ++  + LLK       L +V GSD  K  EQLG E +LE
Sbjct: 3   SKAILLFDVDGTLTPPRNPETHDMKEALLKARAAGFKLGVVGGSDFAKQKEQLG-ESILE 61
Query: 65  QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
            FD+VF ENGL+AYK+GK F + S++  +G +K+  F+  CL  ++ + +P +RG F+EF
Sbjct: 62  DFDYVFSENGLLAYKDGKEFHRNSLLRALGNEKVVAFVKKCLHLIADLDIPVQRGTFVEF 121
Query: 125 RTGLIN 130
           R G+ N
Sbjct: 122 RNGMFN 127

>pdb|3F9R|A Chain A, Crystal Structure Of Trypanosoma Brucei Phosphomannosemutase, Tb.10.700.370 Length = 246

Iteration: 1
 Score =  102 bits (255), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSH-LAIVSGSDMNKVAEQLGGEKVLEQ 65
            + LFDVDGTLT PR   Q + +  L+K+ +     +  V GSD  K  EQLG   VL Q
Sbjct: 5   VLLLFDVDGTLTPPRL-CQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLG-RDVLTQ 62
Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGL+AY+NG    ++S+++ +G D+I  F+   L+ ++ + +P +RG F+E+R
Sbjct: 63  FDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYR 122
Query: 126 TGLIN 130
            G+IN
Sbjct: 123 NGMIN 127

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	3e-26
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	3e-25
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	6e-25
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	8e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246

 Score = 99.2 bits (246), Expect = 3e-26
 Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 3/146 (2%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQ 65
             + LFDVDGTLT PR    +E    + +       +  V GSD  K  EQL G  VL Q
Sbjct: 4   RVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQL-GRDVLTQ 62

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENGL+AY+NG    ++S+++ +G D+I  F+   L+ ++ + +P +RG F+E+R
Sbjct: 63  FDYVFAENGLLAYRNGLEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYR 122

Query: 126 TGLINSIIDHMGEDKIQTFINYCLQH 151
            G+IN  +  +G +  Q   +    +
Sbjct: 123 NGMIN--VSPIGRNCSQAERDEFEVY 146

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A Length = 246

 Score = 96.5 bits (239), Expect = 3e-25
 Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 2/136 (1%)

Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
            +CLFDVDGTLT PRQK   E  DF L+KL+    + +V GSD  KV EQ  G  V+E++
Sbjct: 7   ALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQ-LGNDVVEKY 64

Query: 67  DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
           D+VFPENGLVAYK+GKL  +++I  H+GE  IQ  INYCL +++ + LP KRG FIEFR 
Sbjct: 65  DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 124

Query: 127 GLINSIIDHMGEDKIQ 142
           G++N         + +
Sbjct: 125 GMLNVSPIGRSCSQEE 140

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262

 Score = 96.2 bits (238), Expect = 6e-25
 Identities = 65/126 (51%), Positives = 91/126 (72%), Gaps = 2/126 (1%)

Query: 6   NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG-GEKVLE 64
             +CLFDVDGTLT  RQK   E   F L+KL+    + +V GSD  K+AEQLG G++V+E
Sbjct: 13  RVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIE 71

Query: 65  QFDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 124
           +FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FIEF
Sbjct: 72  KFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEF 131

Query: 125 RTGLIN 130
           R G++N
Sbjct: 132 RNGMLN 137

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 7  TICLFDVDGTLT----QPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG 58
          ++   D DGTL      P +   +  L  L+  LK      IV+G    +++  L 
Sbjct: 2  SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLP 57

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.7 bits (89), Expect = 5e-04
 Identities = 40/229 (17%), Positives = 68/229 (29%), Gaps = 81/229 (35%)

Query: 8   ICLFDVDGTLTQPRQKAQNETLDFLLKKLK--------------PLSHLAIVSGSDMNKV 53
           I L     TLT        E    LLK L               P   L+I++ S  + +
Sbjct: 289 ISLDHHSMTLTPD------EVKSLLLKYLDCRPQDLPREVLTTNPR-RLSIIAESIRDGL 341

Query: 54  A-----EQLGGEKV-------LEQFD-----------FVFPENGLVAYKN-GKLFEKKSI 89
           A     + +  +K+       L   +            VFP +  +       ++     
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401

Query: 90  IDHMGEDKIQTFINYCL----QHLSTVTLPFKRGNFIEFRTGLIN------SIIDH---- 135
            D      +     Y L       ST+++P     ++E +  L N      SI+DH    
Sbjct: 402 SDV--MVVVNKLHKYSLVEKQPKESTISIP---SIYLELKVKLENEYALHRSIVDHYNIP 456

Query: 136 ----------MGEDK-IQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 173
                        D+   + I +   HL  +  P        FR   ++
Sbjct: 457 KTFDSDDLIPPYLDQYFYSHIGH---HLKNIEHP---ERMTLFRMVFLD 499

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	99.96
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	99.94
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	99.94
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.93
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.93
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.92
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.92
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.92
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.91
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.91
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.91
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.91
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.91
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.9
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.9
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.89
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.88
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.87
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	99.86
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.85
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.81
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.8
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.78
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.75
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.68
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.56
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	99.5
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.48
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.46
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	99.44
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.41
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.25
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.13
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.11
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.09
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.06
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	98.98
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	98.93
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	98.92
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	98.89
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	98.86
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	98.83
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	98.81
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	98.76
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	98.61
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	98.61
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	98.59
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	98.57
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	98.56
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	98.51
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	98.5
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	98.5
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	98.49
3fvv_A	232	Uncharacterized protein; unknown function, structu	98.43
3mn1_A	189	Probable YRBI family phosphatase; structural genom	98.43
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	98.37
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	98.35
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	98.33
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	98.32
3mmz_A	176	Putative HAD family hydrolase; structural genomics	98.32
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	98.29
2o2x_A	218	Hypothetical protein; structural genomics, joint c	98.28
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	98.27
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	98.23
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.21
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	98.19
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	98.16
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	98.16
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	98.16
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	98.16
1te2_A	226	Putative phosphatase; structural genomics, phospha	98.14
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	98.14
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	98.1
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	98.08
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	98.08
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	98.06
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	98.03
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	98.03
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	98.0
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	98.0
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	97.99
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	97.99
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	97.97
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	97.94
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	97.94
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	97.92
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	97.92
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	97.89
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	97.89
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	97.88
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	97.85
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	97.83
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	97.81
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	97.81
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	97.81
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	97.8
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	97.79
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	97.79
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	97.77
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	97.76
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	97.76
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	97.74
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	97.74
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	97.71
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	97.71
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	97.7
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	97.68
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	97.67
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	97.66
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	97.66
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	97.65
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	97.63
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	97.63
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	97.57
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	97.56
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	97.54
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	97.54
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	97.52
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	97.48
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	97.43
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	97.42
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	97.4
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	97.38
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	97.33
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	97.33
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	97.25
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	97.23
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	97.21
2hsz_A	243	Novel predicted phosphatase; structural genomics,	97.13
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	97.1
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	97.08
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	97.0
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	96.96
2zg6_A	220	Putative uncharacterized protein ST2620, probable	96.91
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	96.78
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	96.66
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	96.65
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	96.61
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	96.34
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	96.21
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	95.98
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	95.93
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	95.79
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	95.72
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	95.42
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	95.34
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	94.84
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	94.61
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	94.33
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	93.72
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	93.7
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	93.41
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	93.38
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	91.25
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	90.65
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	87.99
1n6j_G	35	Calcineurin-binding protein cabin 1; MADS-BOX, pro	85.78
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	83.73

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=99.96  E-value=2.5e-28  Score=189.95  Aligned_cols=168  Identities=33%  Similarity=0.569  Sum_probs=130.1

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      .+|+|||||||||++++++++++++++ |++|+++ +.|++||||++..+.+.++.. +....+++||+||+.|+..|++
T Consensus         3 ~~kli~~DlDGTLl~~~~~i~~~~~~~-l~~l~~~g~~~~iaTGR~~~~~~~~l~~~-~~~~~~~~i~~NGa~i~~~~~~   80 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPRLCQTDEMRAL-IKRARGAGFCVGTVGGSDFAKQVEQLGRD-VLTQFDYVFAENGLLAYRNGLE   80 (246)
T ss_dssp             CSEEEEECSBTTTBSTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHCTT-HHHHCSEEEEGGGTEEEETTEE
T ss_pred             CceEEEEeCcCCcCCCCCccCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHhhhh-ccccCCEEEECCCcEEEECCEE
Confidence            489999999999999999999999999 9999999 999999999999988887641 1112358999999999998999


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch--------------hhccHHH-HHHHHHHH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII--------------DHMGEDK-IQTFINYC  148 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------~~~~~~~-~~~~~~~l  148 (175)
                      +++..+...++.+.+++++++++++...+.++..++.|++.+.....+.+              .+.+... ..++.+.+
T Consensus        81 i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  160 (246)
T 3f9r_A           81 IHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAEL  160 (246)
T ss_dssp             EEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHHHH
Confidence            99888644457999999999988775555555556677665432211110              1212222 35778888


Q ss_pred             HHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        149 LQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       149 ~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      .+.|++  ++++.|++.++ ++|+|+||.
T Consensus       161 ~~~~~~~~~~~~~sg~~~leI~~~gv~Kg  189 (246)
T 3f9r_A          161 ENSFPDFGLKYSIGGQISFDVFPVGWDKT  189 (246)
T ss_dssp             HHHCGGGCEEEEEETTTEEEEEETTCSGG
T ss_pred             HhhCcCCcEEEEecCCeEEEEEeCCCCHH
Confidence            888986  56789999999 999999996

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=99.94  E-value=8e-26  Score=174.95  Aligned_cols=169  Identities=45%  Similarity=0.761  Sum_probs=119.4

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      .++|+||+|||||||+++++++++++++ |++|++++.|++||||++..+.+.++.. +....+++|++|||.|+.+|+.
T Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~i~v~iaTGR~~~~~~~~l~~~-~~~~~~~~I~~NGa~i~~~~~~   81 (246)
T 2amy_A            4 PGPALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQLGND-VVEKYDYVFPENGLVAYKDGKL   81 (246)
T ss_dssp             CCSEEEEEESBTTTBCTTSCCCHHHHHH-HHHHTTTSEEEEECSSCHHHHHHHHCTT-HHHHCSEEESGGGTEEEETTEE
T ss_pred             CCceEEEEECCCCcCCCCcccCHHHHHH-HHHHHhCCeEEEEcCCCHHHHHHHhccc-cccccCEEEECCCcEEEeCCcE
Confidence            3689999999999999999999999999 9999877999999999999887777631 0001247899999999988899


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccc-------cc-----h--hhcc-HHHHHHHHHHH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN-------SI-----I--DHMG-EDKIQTFINYC  148 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~-----~--~~~~-~~~~~~~~~~l  148 (175)
                      +++..+...++.+.++++++++.+++..+.++..++.|++.......       ..     .  .+.. .....++.+.+
T Consensus        82 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (246)
T 2amy_A           82 LCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADL  161 (246)
T ss_dssp             EEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEeeecccccCHHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHHHHHHHH
Confidence            88876433348899999999998765333344445555443211100       00     0  0111 11233556667


Q ss_pred             HHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        149 LQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       149 ~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      .+.+++  +.++.|++.++ ++|+|+||.
T Consensus       162 ~~~~~~~~~~~~~s~~~~leI~~~~~~Kg  190 (246)
T 2amy_A          162 RKEFAGKGLTFSIGGQISFDVFPDGWDKR  190 (246)
T ss_dssp             HHHTTTSCEEEEEETTTEEEEEETTCSGG
T ss_pred             HHhcCCCcEEEEEcCCcEEEEecCCCchH
Confidence            777764  45555667889 999999996

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=99.94  E-value=5.1e-26  Score=177.88  Aligned_cols=170  Identities=40%  Similarity=0.703  Sum_probs=119.0

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC-CcccccceEEecCCceeeeCCe
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE-KVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~-~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      +++|+||+|||||||+++++++++++++ |++|++++.|++||||++..+.+.++.. .+....+++||+|||.|+.+|+
T Consensus        11 ~~~kli~~DlDGTLl~~~~~is~~~~~a-l~~l~~~i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~~~~~   89 (262)
T 2fue_A           11 KERVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGR   89 (262)
T ss_dssp             --CEEEEEESBTTTBSTTSCCCHHHHHH-HHHHTTTSEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTE
T ss_pred             cCeEEEEEeCccCCCCCCCcCCHHHHHH-HHHHHhCCEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEEeCCe
Confidence            4679999999999999999999999999 9999877999999999999988877641 0001124789999999998889


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccccccc-------ch-------hhcc-HHHHHHHHHH
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINS-------II-------DHMG-EDKIQTFINY  147 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~-------~~~~-~~~~~~~~~~  147 (175)
                      .++...+...++.+.++++++++.+++..+.++..++.|+.........       ..       .+.. .....++.+.
T Consensus        90 ~i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (262)
T 2fue_A           90 LLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEA  169 (262)
T ss_dssp             ECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             EEEEeeccccCCHHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEEcCCHHHHHHHHHH
Confidence            8888774223488999999999987754444444455555432211000       00       0111 1123456667


Q ss_pred             HHHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        148 CLQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       148 l~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +.+.+++  +.++.|++.++ ++|+|+||.
T Consensus       170 l~~~~~~~~~~~~~s~~~~leI~~~~vsKg  199 (262)
T 2fue_A          170 LKTEFAGKGLRFSRGGMISFDVFPEGWDKR  199 (262)
T ss_dssp             HHHHTTTSCEEEECCSSSCEEEEETTCSTT
T ss_pred             HHHhCCCceEEEEECCCcEEEEecCCCCHH
Confidence            7777765  44455567789 999999995

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.93  E-value=3e-26  Score=180.86  Aligned_cols=168  Identities=13%  Similarity=0.103  Sum_probs=122.7

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      |+|. +|+|||||||||++++++++++++++ |++++++ +.|++||||++..+.+.++.+++....+++|++||+.++.
T Consensus         1 m~mm-~kli~~DlDGTLl~~~~~i~~~~~~a-L~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~   78 (282)
T 1rkq_A            1 MSLA-IKLIAIDMDGTLLLPDHTISPAVKNA-IAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK   78 (282)
T ss_dssp             -CCC-CCEEEECCCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred             CCcc-ceEEEEeCCCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEE
Confidence            6643 89999999999999999999999999 9999999 9999999999999888887665422223799999999997


Q ss_pred             --CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc------------ccc-------ccc---h--
Q psy16481         80 --NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT------------GLI-------NSI---I--  133 (175)
Q Consensus        80 --~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~------------~~~-------~~~---~--  133 (175)
                        +|+.++...+    +.+.++++++++++++..+.++..++.|+....            ...       .+.   +  
T Consensus        79 ~~~~~~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (282)
T 1rkq_A           79 AADGSTVAQTAL----SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFL  154 (282)
T ss_dssp             TTTCCEEEECCB----CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBC
T ss_pred             CCCCeEEEEecC----CHHHHHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCce
Confidence              7889898888    999999999999887654444444444432110            000       000   0  


Q ss_pred             ---hhccHHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        134 ---DHMGEDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       134 ---~~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                         .+...+...++.+.+.+.++ ++.++.|++.++ ++|+|++|.
T Consensus       155 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~  200 (282)
T 1rkq_A          155 KVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKG  200 (282)
T ss_dssp             EEEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHH
T ss_pred             EEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCH
Confidence               01122344455555555554 477778888899 999999994

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.93  E-value=4e-25  Score=173.14  Aligned_cols=168  Identities=12%  Similarity=0.106  Sum_probs=127.0

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      |+| ++|+|+|||||||+++++.++++++++ |++++++ +.|++||||++..+.+.+..+++.....++|++||+.+++
T Consensus         1 M~M-~~kli~fDlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~   78 (279)
T 4dw8_A            1 MSL-KYKLIVLDLDGTLTNSKKEISSRNRET-LIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIIN   78 (279)
T ss_dssp             ----CCCEEEECCCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEE
T ss_pred             CCC-cceEEEEeCCCCCCCCCCccCHHHHHH-HHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEE
Confidence            554 489999999999999999999999999 9999999 9999999999999988887765421124799999999994


Q ss_pred             --CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccc-------------cccc------------
Q psy16481         80 --NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL-------------INSI------------  132 (175)
Q Consensus        80 --~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~------------  132 (175)
                        +++.++...+    +.+.++++++++++++..+.++..++.|.......             ....            
T Consensus        79 ~~~~~~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  154 (279)
T 4dw8_A           79 WESKEMMYENVL----PNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAK  154 (279)
T ss_dssp             TTTCCEEEECCC----CGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSC
T ss_pred             CCCCeEEEEecC----CHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceE
Confidence              7888888888    99999999999998876555555444444311000             0000            


Q ss_pred             h-hhccHHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        133 I-DHMGEDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       133 ~-~~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      . .+...+...++.+.+.+.++ .+.++.+.+.++ ++|+|+||.
T Consensus       155 i~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  199 (279)
T 4dw8_A          155 CLIVGDAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKA  199 (279)
T ss_dssp             EEEESCHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHH
T ss_pred             EEEeCCHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChH
Confidence            0 11133455677888888886 488889999999 999999994

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.92  E-value=2e-25  Score=174.83  Aligned_cols=167  Identities=13%  Similarity=0.127  Sum_probs=112.0

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee-
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY-   78 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~-   78 (175)
                      |+| .+|+|+|||||||+++++.++++++++ |++++++ +.|++||||++..+.+.++.+++....+++|++||+ ++ 
T Consensus         1 M~m-~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa-i~~   77 (279)
T 3mpo_A            1 MSL-TIKLIAIDIDGTLLNEKNELAQATIDA-VQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGS-VAQ   77 (279)
T ss_dssp             -----CCEEEECC-----------CHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGT-EEE
T ss_pred             CCc-ceEEEEEcCcCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcE-EEE
Confidence            554 489999999999999999999999999 9999999 999999999999998888776543333479999999 66 


Q ss_pred             -eCCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccc------------c-------cccc------
Q psy16481         79 -KNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG------------L-------INSI------  132 (175)
Q Consensus        79 -~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~------------~-------~~~~------  132 (175)
                       .+++.++...+    +.+.++++++++++++..+.++..++.|......            .       ..+.      
T Consensus        78 ~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (279)
T 3mpo_A           78 TISGKVLTNHSL----TYEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTIS  153 (279)
T ss_dssp             ETTSCEEEECCC----CHHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCC
T ss_pred             CCCCCEEEecCC----CHHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcE
Confidence             36888888888    9999999999999987766665555544432110            0       0000      


Q ss_pred             -h-hhccHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        133 -I-DHMGEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       133 -~-~~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                       . .+...+...++.+.+.+.+++ +.++.+++.++ +.|+|+||.
T Consensus       154 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  199 (279)
T 3mpo_A          154 KAMFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKG  199 (279)
T ss_dssp             EEEEECCHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHH
T ss_pred             EEEEcCCHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChH
Confidence             0 112234444566666555553 77788889999 999999994

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.92  E-value=5.4e-25  Score=173.51  Aligned_cols=163  Identities=11%  Similarity=0.060  Sum_probs=125.2

Q ss_pred             CcceEEEEecCCCccCCCC-CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ-KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNG   81 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~   81 (175)
                      ..+|+|+|||||||+++++ .++++++++ |++++++ +.|++||||++..+...++.++.   ..++|++||+.++..+
T Consensus        19 ~~~kli~~DlDGTLl~~~~~~i~~~~~~a-l~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~---~~~~I~~NGa~i~~~~   94 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGSLLIDPEYMSV-IDRLIDKGIIFVVCSGRQFSSEFKLFAPIKH---KLLYITDGGTVVRTPK   94 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTCSCCCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHTGGGGG---GCEEEETTTTEEECSS
T ss_pred             cCceEEEEeCcCCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---CcEEEECCCcEEEECC
Confidence            4689999999999999988 999999999 9999999 99999999999999988887642   2379999999999889


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHh--cccccccccccceeeecccc-------------------ccc--ch----h
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQH--LSTVTLPFKRGNFIEFRTGL-------------------INS--II----D  134 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~~~~-------------------~~~--~~----~  134 (175)
                      +.++...+    +.+.+++++++++++  +..+.++..++.|+......                   ..+  ..    .
T Consensus        95 ~~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~  170 (283)
T 3dao_A           95 EILKTYPM----DEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFT  170 (283)
T ss_dssp             CEEEECCC----CHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEE
T ss_pred             EEEEEecC----CHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEE
Confidence            99998888    999999999999987  55545555555554321100                   000  00    0


Q ss_pred             hc-cHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        135 HM-GEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       135 ~~-~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      .. ......++.+.+.+.+++ +.++.+++.++ ++|+|+||.
T Consensus       171 i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  213 (283)
T 3dao_A          171 VFHPDKCEELCTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKW  213 (283)
T ss_dssp             EECSSCHHHHHTTTHHHHHTTTEEEEEETTTEEEEEETTCCHH
T ss_pred             EEcChHHHHHHHHHHHHHhcCCEEEEEecCceEEEeeCCCcHH
Confidence            11 233344566677777764 78888999999 999999994

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.92  E-value=2.6e-24  Score=168.48  Aligned_cols=161  Identities=11%  Similarity=0.050  Sum_probs=121.1

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+|+|||||||+++++.++++++++ |++ +++ +.|++||||++..+.+.++.+++.  ..++|++|||.++. +++.
T Consensus         2 ikli~~DlDGTLl~~~~~i~~~~~~a-l~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~--~~~~I~~NGa~i~~~~~~~   77 (268)
T 1nf2_A            2 YRVFVFDLDGTLLNDNLEISEKDRRN-IEK-LSRKCYVVFASGRMLVSTLNVEKKYFKR--TFPTIAYNGAIVYLPEEGV   77 (268)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHH-HHH-HTTTSEEEEECSSCHHHHHHHHHHHSSS--CCCEEEGGGTEEEETTTEE
T ss_pred             ccEEEEeCCCcCCCCCCccCHHHHHH-HHH-HhCCCEEEEECCCChHHHHHHHHHhCCC--CCeEEEeCCeEEECCCCCE
Confidence            69999999999999999999999999 999 888 999999999999998887765432  12689999999998 8899


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc----------ccc-----c---cc---h-----hhcc
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT----------GLI-----N---SI---I-----DHMG  137 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~----------~~~-----~---~~---~-----~~~~  137 (175)
                      ++...+    +.+.++++++++++++..+.++..++.|+....          +..     .   +.   .     .+..
T Consensus        78 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~  153 (268)
T 1nf2_A           78 ILNEKI----PPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDT  153 (268)
T ss_dssp             EEECCB----CHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECC
T ss_pred             EEecCC----CHHHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECC
Confidence            988888    999999999999887655444444444442110          000     0   00   0     0112


Q ss_pred             HHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        138 EDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       138 ~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      .+...++.+.+.+.++ .+.++.|++.++ ++|+|++|.
T Consensus       154 ~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  192 (268)
T 1nf2_A          154 PERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKG  192 (268)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHH
T ss_pred             HHHHHHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChH
Confidence            2344567777777665 588888888899 999999994

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.91  E-value=1.1e-24  Score=173.77  Aligned_cols=165  Identities=18%  Similarity=0.132  Sum_probs=122.0

Q ss_pred             cceEEEEecCCCccCC-CCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHh--cCCC-cccccceEEecCCceeee
Q psy16481          5 ANTICLFDVDGTLTQP-RQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQL--GGEK-VLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~-~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~--~~~~-~~~~~~~~i~~NGa~i~~   79 (175)
                      .+|+|||||||||+++ ++.++++++++ |++|+++ +.|++||||++..+..++  +.++ +.....++|++|||.|+.
T Consensus        26 ~ikli~~DlDGTLl~~~~~~is~~~~~a-l~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~  104 (301)
T 2b30_A           26 DIKLLLIDFDGTLFVDKDIKVPSENIDA-IKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYD  104 (301)
T ss_dssp             CCCEEEEETBTTTBCCTTTCSCHHHHHH-HHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEEC
T ss_pred             cccEEEEECCCCCcCCCCCccCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEe
Confidence            4799999999999999 89999999999 9999999 999999999999988887  6543 221113689999999998


Q ss_pred             -CCeEeeccchhhhhCHHHHHHHHHHHHHhcc-ccccc-ccccceeeecccc-------------c-----cc-c--h--
Q psy16481         80 -NGKLFEKKSIIDHMGEDKIQTFINYCLQHLS-TVTLP-FKRGNFIEFRTGL-------------I-----NS-I--I--  133 (175)
Q Consensus        80 -~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~-~~~~~~i~~~~~~-------------~-----~~-~--~--  133 (175)
                       +|+.++...+    +.+.++++++++.+.+. .+.++ ..++.|+......             .     .+ .  +  
T Consensus       105 ~~~~~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  180 (301)
T 2b30_A          105 QIGYTLLDETI----ETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMN  180 (301)
T ss_dssp             TTCCEEEECCC----CHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCS
T ss_pred             CCCCEEEEccC----CHHHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCce
Confidence             8899998888    99999999999988655 43333 2334443211000             0     00 0  0  


Q ss_pred             ---hhccHHHHHHHHHHHHHhcC-CCCCceeecceE-EecCCcccC
Q psy16481        134 ---DHMGEDKIQTFINYCLQHLS-TVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       134 ---~~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                         .+...+...++.+.+.+.++ ++.++.|++.++ ++|+|++|.
T Consensus       181 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~  226 (301)
T 2b30_A          181 KLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKY  226 (301)
T ss_dssp             EEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHH
T ss_pred             EEEEECCHHHHHHHHHHHHHHhcCCEEEEEeCCcceEecCCCCCcH
Confidence               01122345567777777775 577788888899 999999994

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.91  E-value=9.7e-25  Score=172.11  Aligned_cols=163  Identities=11%  Similarity=0.121  Sum_probs=119.7

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NG   81 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~   81 (175)
                      ..+|+|+|||||||+++++.++++++++ |++++++ +.|++||||++..+.+.++.+++.   .++|++||+.+++ ++
T Consensus        19 ~~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~---~~~I~~nGa~i~~~~~   94 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPDHFLTPYAKET-LKLLTARGINFVFATGRHYIDVGQIRDNLGIR---SYMITSNGARVHDSDG   94 (285)
T ss_dssp             --CCEEEEECCCCCSCTTSCCCHHHHHH-HHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC---CEEEEGGGTEEECTTS
T ss_pred             CcceEEEEeCcCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC---ccEEEcCCeEEECCCC
Confidence            3689999999999999999999999999 9999999 999999999999998887766543   3789999999994 78


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHH-Hhcccccccccccceeeecccc---------c-----ccc---------h-hh-
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCL-QHLSTVTLPFKRGNFIEFRTGL---------I-----NSI---------I-DH-  135 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~i~~~~~~---------~-----~~~---------~-~~-  135 (175)
                      +.++...+    +.+.++++++++. .....+.++..++.|.......         .     ...         . .+ 
T Consensus        95 ~~l~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~  170 (285)
T 3pgv_A           95 QQIFAHNL----DRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTC  170 (285)
T ss_dssp             CEEEECCC----CHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEEC
T ss_pred             CEEEecCC----CHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeC
Confidence            88888888    9999999987443 3333333444444443211000         0     000         0 11 


Q ss_pred             ccHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        136 MGEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       136 ~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...+...++.+.+.+.+++ +.++.|.+.++ ++|+|+||.
T Consensus       171 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  211 (285)
T 3pgv_A          171 EDHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKG  211 (285)
T ss_dssp             SCHHHHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHH
T ss_pred             CCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChH
Confidence            2335556778888887764 77888889999 999999994

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.91  E-value=4.4e-24  Score=167.34  Aligned_cols=162  Identities=16%  Similarity=0.163  Sum_probs=120.3

Q ss_pred             cceEEEEecCCCccCCCCCCCHHH-HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNET-LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~-~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      .+|+|+|||||||+++++.+++++ +++ |++|+++ +.|++||||++..+.+.++.++.   ..++|++||+.++.+|+
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~---~~~~I~~NGa~i~~~~~   77 (271)
T 1rlm_A            2 AVKVIVTDMDGTFLNDAKTYNQPRFMAQ-YQELKKRGIKFVVASGNQYYQLISFFPELKD---EISFVAENGALVYEHGK   77 (271)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHH-HHHHHHHTCEEEEECSSCHHHHGGGCTTTTT---TSEEEEGGGTEEEETTE
T ss_pred             CccEEEEeCCCCCCCCCCcCCHHHHHHH-HHHHHHCCCEEEEEeCCcHHHHHHHHHhcCC---CCEEEECCccEEEECCe
Confidence            479999999999999999999996 899 9999998 99999999999999888776532   24799999999998899


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhc-ccccccccccceeeecc-------------ccc---ccc----h-----hhc
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHL-STVTLPFKRGNFIEFRT-------------GLI---NSI----I-----DHM  136 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~-------------~~~---~~~----~-----~~~  136 (175)
                      .++...+    +.+.+++++++++++. ..+.++..++.|+....             ...   .+.    .     ...
T Consensus        78 ~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~  153 (271)
T 1rlm_A           78 QLFHGEL----TRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNL  153 (271)
T ss_dssp             EEEECCC----CHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEEC
T ss_pred             EEEEecC----CHHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEc
Confidence            8888888    9999999999998763 22223333333432100             000   000    0     011


Q ss_pred             cHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        137 GEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       137 ~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ......++.+.+.+.+++ +.++.|++.++ ++|+|++|.
T Consensus       154 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~  193 (271)
T 1rlm_A          154 PDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKA  193 (271)
T ss_dssp             CGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHH
T ss_pred             CHHHHHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChH
Confidence            233455777778777775 77788888899 999999984

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.91  E-value=8.1e-24  Score=168.35  Aligned_cols=162  Identities=12%  Similarity=0.134  Sum_probs=125.3

Q ss_pred             cceEEEEecCCCccCCCCCCCHH-HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNE-TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~-~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      .+|+|+|||||||+++++.+++. ++++ |++++++ +.|++||||++..+.+.++.++.   ..++|++||+.++..++
T Consensus        36 ~iKli~fDlDGTLld~~~~i~~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~---~~~~i~~nGa~i~~~~~  111 (304)
T 3l7y_A           36 SVKVIATDMDGTFLNSKGSYDHNRFQRI-LKQLQERDIRFVVASSNPYRQLREHFPDCHE---QLTFVGENGANIISKNQ  111 (304)
T ss_dssp             CCSEEEECCCCCCSCTTSCCCHHHHHHH-HHHHHHTTCEEEEECSSCHHHHHTTCTTTGG---GSEEEEGGGTEEEETTE
T ss_pred             eeEEEEEeCCCCCCCCCCccCHHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHhCC---CCcEEeCCCcEEEECCE
Confidence            47999999999999999999999 8899 9999999 99999999999999888877643   24899999999998999


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHh--cccccccccccceeeeccc-------------------cccc-c-----h-h
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQH--LSTVTLPFKRGNFIEFRTG-------------------LINS-I-----I-D  134 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~--~~~~~~~~~~~~~i~~~~~-------------------~~~~-~-----~-~  134 (175)
                      .++...+    +.+.+++++++++++  +..+.++..++.|+.....                   ...+ .     . .
T Consensus       112 ~i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~  187 (304)
T 3l7y_A          112 SLIEVFQ----QREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTL  187 (304)
T ss_dssp             EEEECCC----CHHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEE
T ss_pred             EEEEecC----CHHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEE
Confidence            9998888    999999999999883  4444444555554432100                   0000 0     0 1


Q ss_pred             hccHHHHHHHHHHHHHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        135 HMGEDKIQTFINYCLQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       135 ~~~~~~~~~~~~~l~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +...+...++.+.+.+.+++  +.++.+.+.++ ++|+|+||.
T Consensus       188 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~  230 (304)
T 3l7y_A          188 QVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKG  230 (304)
T ss_dssp             ECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHH
T ss_pred             EcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHH
Confidence            11344556788888888886  78888889999 999999995

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.91  E-value=9.2e-24  Score=166.83  Aligned_cols=160  Identities=13%  Similarity=0.128  Sum_probs=120.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+|+|||||||+++++.+++.++++ |++++++ +.|++||||++..+...+..+++.   .++|++||+.++. +++.
T Consensus         4 ikli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~---~~~I~~NGa~i~~~~~~~   79 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSKHQVSLENENA-LRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK---TWVISANGAVIHDPEGRL   79 (288)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC---CEEEEGGGTEEECTTCCE
T ss_pred             eEEEEEeCCCCCCCCCCccCHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CcEEEcCCeEEEcCCCcE
Confidence            79999999999999999999999999 9999999 999999999999998888776532   2589999999997 7888


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc----------------------------------cc-
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT----------------------------------GL-  128 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~----------------------------------~~-  128 (175)
                      ++...+    +.+.++++++++.+++..+.+++.++.|+....                                  .. 
T Consensus        80 ~~~~~~----~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (288)
T 1nrw_A           80 YHHETI----DKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFA  155 (288)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEE
T ss_pred             EEEeeC----CHHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCce
Confidence            888888    999999999999887655444444444432100                                  00 


Q ss_pred             -----cccc------h-----hhc-cHHHHHHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        129 -----INSI------I-----DHM-GEDKIQTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       129 -----~~~~------~-----~~~-~~~~~~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                           ..+.      .     .+. ..+...++.+.+.+ ++++.++.|+++++ ++|+|++|.
T Consensus       156 ~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~-~~~~~~~~s~~~~lei~~~~~~K~  218 (288)
T 1nrw_A          156 YINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEH-AEDLTLVSSAEHNFELSSRKASKG  218 (288)
T ss_dssp             ECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTT-CTTEEEECSSTTEEEEEETTCSHH
T ss_pred             EcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhh-CCCEEEEeeCCCcEEEecCCCChH
Confidence                 0000      0     011 12344456666655 56778888888999 999999994

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.90  E-value=9.9e-24  Score=166.04  Aligned_cols=162  Identities=11%  Similarity=0.092  Sum_probs=124.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGK   82 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~   82 (175)
                      ++|+|+|||||||+++++.++++++++ |++++++ +.|++||||++..+...++.+++.   .++|++||+.+++ .++
T Consensus         5 ~~kli~fDlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~---~~~i~~nGa~i~~~~~~   80 (290)
T 3dnp_A            5 SKQLLALNIDGALLRSNGKIHQATKDA-IEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD---AKLITHSGAYIAEKIDA   80 (290)
T ss_dssp             -CCEEEECCCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC---SCEEEGGGTEEESSTTS
T ss_pred             cceEEEEcCCCCCCCCCCccCHHHHHH-HHHHHHCCCEEEEECCCChHHHHHHHHHcCCC---CeEEEcCCeEEEcCCCC
Confidence            589999999999999999999999999 9999999 999999999999998887776532   2789999999984 788


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccccc------------------ccch-----------
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLI------------------NSII-----------  133 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------------~~~~-----------  133 (175)
                      .++...+    +.+.++++++++++++..+.++..++.|........                  ...+           
T Consensus        81 ~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (290)
T 3dnp_A           81 PFFEKRI----SDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPV  156 (290)
T ss_dssp             CSEECCC----CHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCC
T ss_pred             EEEecCC----CHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCC
Confidence            8888888    999999999999988766555555544432211000                  0000           


Q ss_pred             ------hhccHHHHHHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        134 ------DHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       134 ------~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                            .+...+...++.+.+...++++.++.|.+.++ ++|+|+||.
T Consensus       157 ~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~  204 (290)
T 3dnp_A          157 SAPVIEVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKE  204 (290)
T ss_dssp             CCSEEEEECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHH
T ss_pred             CceEEEEeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHH
Confidence                  01134455667777756667788889999999 999999994

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.90  E-value=1.6e-23  Score=163.10  Aligned_cols=107  Identities=15%  Similarity=0.215  Sum_probs=93.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      +|+|+|||||||+++++.++++++++ |++++++ +.|++||||++..+.+.++.+++    +.+|++||+.++.+++.+
T Consensus         5 ~kli~fDlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~----~~~i~~nGa~i~~~~~~~   79 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEVYGIPESAKHA-IRLCQKNHCSVVICTGRSMGTIQDDVLSLGV----DGYIAGGGNYIQYHGELL   79 (274)
T ss_dssp             CCEEEECSBTTTBBTTTBCCHHHHHH-HHHHHHTTCEEEEECSSCTTTSCHHHHTTCC----SEEEETTTTEEEETTEEE
T ss_pred             ceEEEEECCCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEeCCChHHHHHHHHHcCC----CEEEecCccEEEECCEEE
Confidence            79999999999999999999999999 9999999 99999999999998888877643    357899999999889999


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhcccccccccccce
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNF  121 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~  121 (175)
                      +...+    +.+.+.++++++++++..+.++..++.|
T Consensus        80 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~  112 (274)
T 3fzq_A           80 YNQSF----NQRLIKEVVCLLKKREVAFSIESQEKVF  112 (274)
T ss_dssp             EECCC----CHHHHHHHHHHHHHHTCEEEEECSSCEE
T ss_pred             EEcCC----CHHHHHHHHHHHHHCCceEEEEeCCceE
Confidence            98888    9999999999999887665555544444

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.89  E-value=5.8e-23  Score=159.38  Aligned_cols=157  Identities=13%  Similarity=0.094  Sum_probs=115.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      .+|+|+|||||||+++++.+++.++++ |++++++ +.|++||||++..+.+.+..+++    +.+|++||+.++..++.
T Consensus         2 ~~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~----~~~i~~nGa~i~~~~~~   76 (258)
T 2pq0_A            2 GRKIVFFDIDGTLLDEQKQLPLSTIEA-VRRLKQSGVYVAIATGRAPFMFEHVRKQLGI----DSFVSFNGQYVVFEGNV   76 (258)
T ss_dssp             CCCEEEECTBTTTBCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCGGGSHHHHHHHTC----CCEEEGGGTEEEETTEE
T ss_pred             CceEEEEeCCCCCcCCCCccCHHHHHH-HHHHHHCCCEEEEECCCChHHHHHHHHhcCC----CEEEECCCCEEEECCEE
Confidence            379999999999999999999999999 9999999 99999999999988777765432    24789999999988899


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecc-----------c--ccccc-------h-----hhccH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT-----------G--LINSI-------I-----DHMGE  138 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~-----------~--~~~~~-------~-----~~~~~  138 (175)
                      ++...+    +.+.++++++++++++..+.++..++.|.....           .  ...+.       .     .+...
T Consensus        77 i~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  152 (258)
T 2pq0_A           77 LYKQPL----RREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA  152 (258)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH
T ss_pred             EEEecC----CHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH
Confidence            888888    999999999999987665444444443322100           0  00000       0     00111


Q ss_pred             HHHHHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        139 DKIQTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       139 ~~~~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ..    ...+.+.++++.++.+.+.++ ++|+|+||.
T Consensus       153 ~~----~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~  185 (258)
T 2pq0_A          153 EE----EEPYVRNYPEFRFVRWHDVSTDVLPAGGSKA  185 (258)
T ss_dssp             HH----HHHHHHHCTTEEEEEEETTEEEEEESSCCHH
T ss_pred             HH----HHHHHHhCCCeEEEEeCCceEEEEECCCChH
Confidence            11    223444567777788899999 999999995

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.88  E-value=2.2e-22  Score=156.71  Aligned_cols=156  Identities=20%  Similarity=0.235  Sum_probs=116.0

Q ss_pred             cceEEEEecCCCccC-CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCcee-eeCC
Q psy16481          5 ANTICLFDVDGTLTQ-PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVA-YKNG   81 (175)
Q Consensus         5 ~~kli~~DlDGTLl~-~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i-~~~~   81 (175)
                      .+|+|+|||||||++ +++.++++++++ |++++++ ++|++||||++..+ +.+..++    .+++|++||+.+ +..+
T Consensus        11 miKli~~DlDGTLl~~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~~~~~-~~~~~l~----~~~~i~~nGa~i~~~~~   84 (268)
T 3r4c_A           11 MIKVLLLDVDGTLLSFETHKVSQSSIDA-LKKVHDSGIKIVIATGRAASDL-HEIDAVP----YDGVIALNGAECVLRDG   84 (268)
T ss_dssp             CCCEEEECSBTTTBCTTTCSCCHHHHHH-HHHHHHTTCEEEEECSSCTTCC-GGGTTSC----CCEEEEGGGTEEEETTS
T ss_pred             ceEEEEEeCCCCCcCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCChHHh-HHHHhcC----CCcEEEeCCcEEEEcCC
Confidence            489999999999999 567999999999 9999999 99999999998877 4555543    247899999999 8878


Q ss_pred             eEeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccc------------cc---cc-h----------hh
Q psy16481         82 KLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL------------IN---SI-I----------DH  135 (175)
Q Consensus        82 ~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~---~~-~----------~~  135 (175)
                      +.++...+    +.+.+.++++++++++..+.++..++.|+......            ..   +. .          .+
T Consensus        85 ~~~~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (268)
T 3r4c_A           85 SVIRKVAI----PAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFY  160 (268)
T ss_dssp             CEEEECCC----CHHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEE
T ss_pred             eEEEEecC----CHHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEe
Confidence            88888888    99999999999988776655555555554321100            00   00 0          00


Q ss_pred             ccHHHHHHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        136 MGEDKIQTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       136 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ...    +..+.+.+.++++.++.+.+.++ ++|+|+||.
T Consensus       161 ~~~----~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~  196 (268)
T 3r4c_A          161 FDE----EAEQKVMPLLSGLSATRWHPLFADVNVAGTSKA  196 (268)
T ss_dssp             CCH----HHHHHHGGGCTTEEEEEEETTEEEEEETTCCHH
T ss_pred             cCh----HHHHHHHHhCCCcEEEEecCCeEEEeeCCCCHH
Confidence            011    12234455667777788888999 999999994

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.87  E-value=1.7e-22  Score=157.22  Aligned_cols=158  Identities=14%  Similarity=0.186  Sum_probs=113.1

Q ss_pred             eEEEEecCCCccCCCCC-CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          7 TICLFDVDGTLTQPRQK-AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         7 kli~~DlDGTLl~~~~~-i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      |+|+|||||||+++++. ++++++++ |++++++ +.|++||||+ ..+.+.++.++.....+++|++||+.++.+++.+
T Consensus         3 kli~~DlDGTLl~~~~~~i~~~~~~a-l~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~i   80 (261)
T 2rbk_A            3 KALFFDIDGTLVSFETHRIPSSTIEA-LEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEVI   80 (261)
T ss_dssp             CEEEECSBTTTBCTTTSSCCHHHHHH-HHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEE
T ss_pred             cEEEEeCCCCCcCCCCCcCCHHHHHH-HHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEEE
Confidence            89999999999999987 99999999 9999999 9999999999 8775544432200002368999999999888888


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeeccc--------cccc-------------ch-----hhccH
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG--------LINS-------------II-----DHMGE  138 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~-------------~~-----~~~~~  138 (175)
                      +...+    +.+.++++++++++++..+.+++.++.|+.....        ....             .+     .+..+
T Consensus        81 ~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~  156 (261)
T 2rbk_A           81 YKSAI----PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITE  156 (261)
T ss_dssp             EECCC----CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCCH
T ss_pred             EecCC----CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEeCH
Confidence            88888    9999999999999876555454444444421100        0000             00     01111


Q ss_pred             HHHHHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        139 DKIQTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       139 ~~~~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ..    ...+.+.++++.++.|++.++ ++|+|++|.
T Consensus       157 ~~----~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~  189 (261)
T 2rbk_A          157 EE----EKEVLPSIPTCEIGRWYPAFADVTAKGDTKQ  189 (261)
T ss_dssp             HH----HHHHGGGSTTCEEECSSTTCCEEESTTCSHH
T ss_pred             HH----HHHHHHhcCCeEEEEecCCeEEecCCCCChH
Confidence            11    123556677788888888899 999999984

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=99.86  E-value=1.2e-21  Score=151.35  Aligned_cols=150  Identities=15%  Similarity=0.068  Sum_probs=103.7

Q ss_pred             ceEEEEecCCCccCC-----CCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC
Q psy16481          6 NTICLFDVDGTLTQP-----RQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN   80 (175)
Q Consensus         6 ~kli~~DlDGTLl~~-----~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~   80 (175)
                      +|+||+||||||++.     ++.++++++++ |++|+++..|++||||++..+.+.++.+      .++|++||+.|+.+
T Consensus         1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~a-l~~l~~~g~v~iaTGR~~~~~~~~~~~l------~~~I~~nGa~i~~~   73 (239)
T 1u02_A            1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSL-ISDLKERFDTYIVTGRSPEEISRFLPLD------INMICYHGACSKIN   73 (239)
T ss_dssp             -CEEEEECBTTTBCCCSCGGGCCCCHHHHHH-HHHHHHHSEEEEECSSCHHHHHHHSCSS------CEEEEGGGTEEEET
T ss_pred             CeEEEEecCCCCcCCCCCcccCCCCHHHHHH-HHHHhcCCCEEEEeCCCHHHHHHHhccc------hheEEECCEEEeeC
Confidence            589999999999983     45899999999 9999874599999999999999888763      37999999999988


Q ss_pred             CeE------eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccchhhccHHHHHHHHHHHHHhcCC
Q psy16481         81 GKL------FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLST  154 (175)
Q Consensus        81 ~~~------i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  154 (175)
                      |+.      ++...+    +.+.++++++++.+.+. +.++..+..|......   . +.+ ..+....+.+.+.+. ++
T Consensus        74 ~~~~~~~~~~~~~~l----~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~-~~~~~~~~~~~l~~~-~~  142 (239)
T 1u02_A           74 GQIVYNNGSDRFLGV----FDRIYEDTRSWVSDFPG-LRIYRKNLAVLYHLGL---M-GAD-MKPKLRSRIEEIARI-FG  142 (239)
T ss_dssp             TEEEECTTGGGGHHH----HHHHHHHHTTHHHHSTT-CEEEEETTEEEEECTT---S-CST-THHHHHHHHHHHHHH-HT
T ss_pred             Ceeeecccccccchh----hHHHHHHHHHHHhhCCC-cEEEecCCEEEEEcCC---C-Chh-HHHHHHHHHHHHhcc-CC
Confidence            887      454555    88889999888877532 2222222222111000   0 011 122233455555543 34


Q ss_pred             CCCceeecceE-EecCCcccC
Q psy16481        155 VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       155 ~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +.+ .+++.++ ++|+|+||.
T Consensus       143 ~~~-~~~~~~lei~~~~~~Kg  162 (239)
T 1u02_A          143 VET-YYGKMIIELRVPGVNKG  162 (239)
T ss_dssp             CEE-EECSSEEEEECTTCCHH
T ss_pred             cEE-EeCCcEEEEEcCCCCHH
Confidence            553 5677889 999999995

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.85  E-value=2.5e-21  Score=152.29  Aligned_cols=97  Identities=15%  Similarity=0.123  Sum_probs=81.9

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee-eC-C
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY-KN-G   81 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~-~~-~   81 (175)
                      ++|+||+|||||||++++.++++++++ |++|+++ +.|++||||++..+...++.+++..  .++||+|||.|+ .. +
T Consensus         8 ~~~li~~DlDGTLl~~~~~~~~~~~~~-l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~--~~~I~~NGa~i~~~~~~   84 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSHSYDWQPAAPW-LTRLREANVPVILCSSKTSAEMLYLQKTLGLQG--LPLIAENGAVIQLAEQW   84 (275)
T ss_dssp             CCEEEEEECTTTTSCSSCCSCCTTHHH-HHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT--SCEEEGGGTEEECCTTC
T ss_pred             CceEEEEeCCCCCCCCCCcCCHHHHHH-HHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--CeEEEeCCCeEEecCcc
Confidence            579999999999999888888999999 9999999 9999999999999988887765321  268999999998 43 3


Q ss_pred             e-----EeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         82 K-----LFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        82 ~-----~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                      +     .++...+    +.+.++++++++.+.
T Consensus        85 ~~~~~~~~~~~~l----~~~~~~~i~~~~~~~  112 (275)
T 1xvi_A           85 QEIDGFPRIISGI----SHGEISLVLNTLREK  112 (275)
T ss_dssp             TTSTTTTEEECSS----CHHHHHHHHHHHHHH
T ss_pred             cccCceEEEecCC----CHHHHHHHHHHHHHh
Confidence            4     4577777    999999999988764

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.81  E-value=5e-20  Score=141.24  Aligned_cols=146  Identities=15%  Similarity=0.087  Sum_probs=100.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+|++||||||++++++++++++++ |++|+++ +.|++||||++..+...++.+++.   .++|++||+.++. +|+.
T Consensus         5 ~kli~~DlDGTLl~~~~~i~~~~~~~-l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~---~~~I~~NGa~i~~~~~~~   80 (227)
T 1l6r_A            5 IRLAAIDVDGNLTDRDRLISTKAIES-IRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN---GPVFGENGGIMFDNDGSI   80 (227)
T ss_dssp             CCEEEEEHHHHSBCTTSCBCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEECTTSCE
T ss_pred             eEEEEEECCCCCcCCCCcCCHHHHHH-HHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC---CeEEEeCCcEEEeCCCCE
Confidence            79999999999999999999999999 9999998 999999999999998887765432   2689999999986 7888


Q ss_pred             e-eccchhhhhCHHHHHHHHHHHHHhcccccccccccceeee-cccccccchhhccHHHHHHHHHHHHHhcCCCCCceee
Q psy16481         84 F-EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF-RTGLINSIIDHMGEDKIQTFINYCLQHLSTVTLPFKR  161 (175)
Q Consensus        84 i-~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~  161 (175)
                      + +...+      +.++++ +++.+.     + ..+..|... +.........+...+..    +.+.+.+ ++.++ ++
T Consensus        81 i~~~~~l------~~~~~i-~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~-~~  141 (227)
T 1l6r_A           81 KKFFSNE------GTNKFL-EEMSKR-----T-SMRSILTNRWREASTGFDIDPEDVDYV----RKEAESR-GFVIF-YS  141 (227)
T ss_dssp             EESSCSH------HHHHHH-HHHTTT-----S-SCBCCGGGGGCSSSEEEBCCGGGHHHH----HHHHHTT-TEEEE-EE
T ss_pred             EEEeccH------HHHHHH-HHHHHH-----h-cCCccccccceecccceEEecCCHHHH----HHHHHhc-CEEEE-ec
Confidence            7 65543      567777 766551     1 111111000 00000000011122222    2333335 67777 88


Q ss_pred             cceE-EecCCcccC
Q psy16481        162 GNFI-EFRTGLINH  174 (175)
Q Consensus       162 ~~~i-i~~~Gv~K~  174 (175)
                      +.++ ++|+|++|.
T Consensus       142 ~~~~ei~~~~~~K~  155 (227)
T 1l6r_A          142 GYSWHLMNRGEDKA  155 (227)
T ss_dssp             TTEEEEEETTCSHH
T ss_pred             CcEEEEecCCCCHH
Confidence            8899 999999994

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.80  E-value=4.8e-19  Score=135.63  Aligned_cols=148  Identities=15%  Similarity=0.107  Sum_probs=101.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      +|+|+|||||||+++++.+++.++++ |++++++ +.|++||||++..+...+..+++.   .++|++||+.++.+++.+
T Consensus         3 ~kli~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~~~   78 (231)
T 1wr8_A            3 IKAISIDIDGTITYPNRMIHEKALEA-IRRAESLGIPIMLVTGNTVQFAEAASILIGTS---GPVVAEDGGAISYKKKRI   78 (231)
T ss_dssp             CCEEEEESTTTTBCTTSCBCHHHHHH-HHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEEETTEEE
T ss_pred             eeEEEEECCCCCCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC---CeEEEeCCcEEEeCCEEE
Confidence            79999999999999999999999999 9999998 999999999999987777655432   258899999998877877


Q ss_pred             eccchhhhhCHHHHHHHHHHHH-Hh-cccccccccccceeeecccccccchhhccHHHHHHHHHHHHHhcC-CCCCceee
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCL-QH-LSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLS-TVTLPFKR  161 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~-~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~  161 (175)
                      +...+      +.++++++.++ ++ +..+.+  .+ .+ .. .......+.. ..+..    +.+.+.++ .++++ ++
T Consensus        79 ~~~~l------~~~~~i~~~~~~~~~~~~~~~--~~-~~-~~-~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~-~~  141 (231)
T 1wr8_A           79 FLASM------DEEWILWNEIRKRFPNARTSY--TM-PD-RR-AGLVIMRETI-NVETV----REIINELNLNLVAV-DS  141 (231)
T ss_dssp             ESCCC------SHHHHHHHHHHHHCTTCCBCT--TG-GG-CS-SCEEECTTTS-CHHHH----HHHHHHTTCSCEEE-EC
T ss_pred             EeccH------HHHHHHHHHHHHhCCCceEEe--cC-CC-ce-eeEEEECCCC-CHHHH----HHHHHhcCCcEEEE-ec
Confidence            75543      56788888887 44 222100  00 01 00 0000000000 12222    33334455 47767 77


Q ss_pred             cceE-EecCCcccC
Q psy16481        162 GNFI-EFRTGLINH  174 (175)
Q Consensus       162 ~~~i-i~~~Gv~K~  174 (175)
                      +.++ ++|+|++|.
T Consensus       142 ~~~~ei~~~~~~K~  155 (231)
T 1wr8_A          142 GFAIHVKKPWINKG  155 (231)
T ss_dssp             SSCEEEECTTCCHH
T ss_pred             CcEEEEecCCCChH
Confidence            7888 899999984

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.78  E-value=4e-19  Score=137.69  Aligned_cols=93  Identities=16%  Similarity=0.153  Sum_probs=79.1

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC----
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN----   80 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~----   80 (175)
                      +|+|||||||||+ ++..+++ ++++ |++|+++ +.|++||||++..+...++.+++.   .++|++|||.|+..    
T Consensus         2 ikli~~DlDGTLl-~~~~~~~-~~~~-l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~---~~~I~~NGa~i~~~~~~~   75 (249)
T 2zos_A            2 IRLIFLDIDKTLI-PGYEPDP-AKPI-IEELKDMGFEIIFNSSKTRAEQEYYRKELEVE---TPFISENGSAIFIPKGYF   75 (249)
T ss_dssp             EEEEEECCSTTTC-TTSCSGG-GHHH-HHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC---SCEEETTTTEEECCTTCC
T ss_pred             ccEEEEeCCCCcc-CCCCcHH-HHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---ccEEEeCCeEEEccCCcc
Confidence            6999999999999 7667755 9999 9999999 999999999999998887765432   26899999999953    


Q ss_pred             ----------CeEeeccchhhhhCHHHHHHHHHHHHHh
Q psy16481         81 ----------GKLFEKKSIIDHMGEDKIQTFINYCLQH  108 (175)
Q Consensus        81 ----------~~~i~~~~l~~~l~~~~~~~i~~~~~~~  108 (175)
                                ++.++...+    +.+.++++++++.+.
T Consensus        76 ~~~~~~~~~~~~~i~~~~l----~~~~~~~i~~~~~~~  109 (249)
T 2zos_A           76 PFDVKGKEVGNYIVIELGI----RVEKIREELKKLENI  109 (249)
T ss_dssp             C------CCCCCCEEECSC----CHHHHHHHHHHHHHH
T ss_pred             cccccccccCceEEEecCC----CHHHHHHHHHHHHhh
Confidence                      577887777    999999999988764

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.75  E-value=6.8e-18  Score=130.44  Aligned_cols=71  Identities=17%  Similarity=0.207  Sum_probs=57.6

Q ss_pred             eEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeC
Q psy16481          7 TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKN   80 (175)
Q Consensus         7 kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~   80 (175)
                      ++||+||||||+++++.+ ++++++ |+++++.+.|++||||++..+.+.++.+++. ..+++|++||+.|+..
T Consensus         4 ~li~~DlDGTLl~~~~~~-~~~~~~-l~~~~~gi~v~iaTGR~~~~~~~~~~~l~l~-~~~~~I~~NGa~i~~~   74 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQQAL-EHLQEY-LGDRRGNFYLAYATGRSYHSARELQKQVGLM-EPDYWLTAVGSEIYHP   74 (244)
T ss_dssp             EEEEECTBTTTBSCHHHH-HHHHHH-HHTTGGGEEEEEECSSCHHHHHHHHHHHTCC-CCSEEEETTTTEEEET
T ss_pred             eEEEEeCCCCCcCCHHHH-HHHHHH-HHHhcCCCEEEEEcCCCHHHHHHHHHHcCCC-CCCEEEECCCcEEEeC
Confidence            399999999999987655 678888 9886633999999999999998887764432 1247999999999864

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.68  E-value=8.7e-17  Score=124.81  Aligned_cols=91  Identities=21%  Similarity=0.173  Sum_probs=76.6

Q ss_pred             EEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CC----
Q psy16481          8 ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NG----   81 (175)
Q Consensus         8 li~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~----   81 (175)
                      +|+|||||||++++ .++++++++ |++++++ +.|++||||++..+. .++.   .   .++|++||+.++. .+    
T Consensus         2 li~~DlDGTLl~~~-~i~~~~~~a-l~~l~~~Gi~v~iaTGR~~~~~~-~l~~---~---~~~i~~nGa~i~~~~~~~~~   72 (259)
T 3zx4_A            2 IVFTDLDGTLLDER-GELGPAREA-LERLRALGVPVVPVTAKTRKEVE-ALGL---E---PPFIVENGGGLYLPRDWPVR   72 (259)
T ss_dssp             EEEECCCCCCSCSS-SSCSTTHHH-HHHHHHTTCCEEEBCSSCHHHHH-HTTC---C---SSEEEGGGTEEEEETTCSSC
T ss_pred             EEEEeCCCCCcCCC-cCCHHHHHH-HHHHHHCCCeEEEEeCCCHHHHH-HcCC---C---CcEEEECCcEEEeCCCCccc
Confidence            79999999999999 999999999 9999999 999999999999987 3332   1   3689999999996 33    


Q ss_pred             -------eEeeccchhhhhCHHHHHHHHHHHHH-hccc
Q psy16481         82 -------KLFEKKSIIDHMGEDKIQTFINYCLQ-HLST  111 (175)
Q Consensus        82 -------~~i~~~~l~~~l~~~~~~~i~~~~~~-~~~~  111 (175)
                             +.++...+    +.+.++++++.+++ ++..
T Consensus        73 ~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~  106 (259)
T 3zx4_A           73 AGRPKGGYRVVSLAW----PYRKVRARLREAEALAGRP  106 (259)
T ss_dssp             CSEEETTEEEEECSC----CHHHHHHHHHHHHHHHTSC
T ss_pred             ccccCCceEEEEcCC----CHHHHHHHHHHHHHhcCce
Confidence                   36777777    89999999998885 5544

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.56  E-value=2.3e-14  Score=112.56  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=75.3

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHH--------hhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLK--------KLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENG   74 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~--------~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NG   74 (175)
                      ..+|+|+|||||||+++.  +++.+..+ +.        .+.++ +.++++|||++..+...+..+++....+++++.+|
T Consensus        20 ~~~kliifDlDGTLlds~--i~~~~~~~-l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~g   96 (289)
T 3gyg_A           20 HPQYIVFCDFDETYFPHT--IDEQKQQD-IYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLG   96 (289)
T ss_dssp             SCSEEEEEETBTTTBCSS--CCHHHHHH-HHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETTT
T ss_pred             CCCeEEEEECCCCCcCCC--CCcchHHH-HHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecCC
Confidence            357999999999999987  89999998 88        55667 99999999999998887776554333346777777


Q ss_pred             ceeee---CCeEeecc----chhhhhCHHHHHHHHHHHHHh-ccc
Q psy16481         75 LVAYK---NGKLFEKK----SIIDHMGEDKIQTFINYCLQH-LST  111 (175)
Q Consensus        75 a~i~~---~~~~i~~~----~l~~~l~~~~~~~i~~~~~~~-~~~  111 (175)
                      +.++.   +|..++..    .+....+.+.+.++++.++++ +..
T Consensus        97 ~~i~~~~~ng~~~~~~~~~~~~~~~~~~~~v~e~l~~l~~~~g~~  141 (289)
T 3gyg_A           97 TEITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNIL  141 (289)
T ss_dssp             TEEEECCSSSTTEECHHHHHHHHTTCCHHHHHHHHHHHHHHSSCC
T ss_pred             ceEEEEcCCCcEeecCchhhhhcccCCHHHHHHHHHHHHhhhCce
Confidence            76663   44333221    111113677888998888776 543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=99.50  E-value=2.4e-14  Score=100.16  Aligned_cols=85  Identities=20%  Similarity=0.270  Sum_probs=65.3

Q ss_pred             ceEEEEecCCCccCCCC------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          6 NTICLFDVDGTLTQPRQ------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +|+|+|||||||+++++      .+++.+.++ |++++++ +++++||||++..                   .||+.  
T Consensus         1 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~-l~~l~~~Gi~~~iaTGR~~~~-------------------~nG~~--   58 (126)
T 1xpj_A            1 MKKLIVDLDGTLTQANTSDYRNVLPRLDVIEQ-LREYHQLGFEIVISTARNMRT-------------------YEGNV--   58 (126)
T ss_dssp             CCEEEECSTTTTBCCCCSCGGGCCBCHHHHHH-HHHHHHTTCEEEEEECTTTTT-------------------TTTCH--
T ss_pred             CCEEEEecCCCCCCCCCCccccCCCCHHHHHH-HHHHHhCCCeEEEEeCCChhh-------------------ccccc--
Confidence            48999999999999775      578999999 9999999 9999999998643                   26664  


Q ss_pred             eCCeEeeccchhhhhCHHHHHHHHHHHHHhcccc-------cccccccceeee
Q psy16481         79 KNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTV-------TLPFKRGNFIEF  124 (175)
Q Consensus        79 ~~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~i~~  124 (175)
                              ..+    +.+.++++++++++++..+       .+++.++.|+..
T Consensus        59 --------~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   99 (126)
T 1xpj_A           59 --------GKI----NIHTLPIITEWLDKHQVPYDEILVGKPWCGHDGFYIDD   99 (126)
T ss_dssp             --------HHH----HHHTHHHHHHHHHHTTCCCSEEEECCCCCCTTCEEECT
T ss_pred             --------ccc----CHHHHHHHHHHHHHcCCCEEEEEeCCCccCCCCEEEcC
Confidence                    134    7778899999998876543       234455556543

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.48  E-value=6.6e-15  Score=114.19  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=61.2

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      |+|..+|+|+|||||||+++ ++++++++++ |++|+++ ++|++|||   |++..+.+.+..+++....+.+++.||+.
T Consensus         1 M~m~~~kli~~DlDGTLl~~-~~~~~~~~~a-i~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~   78 (266)
T 3pdw_A            1 MSLKTYKGYLIDLDGTMYNG-TEKIEEACEF-VRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMAT   78 (266)
T ss_dssp             -CCCCCSEEEEECSSSTTCH-HHHHHHHHHH-HHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred             CCcccCCEEEEeCcCceEeC-CEeCccHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHH
Confidence            66778999999999999997 5567889999 9999999 99999988   77778877777766543334577878776


Q ss_pred             ee
Q psy16481         77 AY   78 (175)
Q Consensus        77 i~   78 (175)
                      +.
T Consensus        79 ~~   80 (266)
T 3pdw_A           79 AQ   80 (266)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.46  E-value=2.1e-14  Score=111.54  Aligned_cols=75  Identities=20%  Similarity=0.271  Sum_probs=63.5

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      |++ .+|+|+|||||||+++++.+ ++++++ |++++++ ++|++||   ||++..+.+.+..+|+....+.+++.||+.
T Consensus         1 M~m-~~kli~~DlDGTLl~~~~~i-~~~~ea-l~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~   77 (264)
T 3epr_A            1 MSL-AYKGYLIDLDGTIYKGKSRI-PAGERF-IERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMAT   77 (264)
T ss_dssp             -CC-CCCEEEECCBTTTEETTEEC-HHHHHH-HHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHH
T ss_pred             CCC-CCCEEEEeCCCceEeCCEEC-cCHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHH
Confidence            544 58999999999999999999 899999 9999999 9999999   899999988888877643344688888886


Q ss_pred             ee
Q psy16481         77 AY   78 (175)
Q Consensus        77 i~   78 (175)
                      +.
T Consensus        78 ~~   79 (264)
T 3epr_A           78 VD   79 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=99.44  E-value=1.1e-13  Score=98.81  Aligned_cols=66  Identities=17%  Similarity=0.151  Sum_probs=53.0

Q ss_pred             ceEEEEecCCCccCCCC----CCCHHHHHHHHHhhCCC-eEEEEEcCCC---HHHHHHHhcCCCcccccceEEecCCc
Q psy16481          6 NTICLFDVDGTLTQPRQ----KAQNETLDFLLKKLKPL-SHLAIVSGSD---MNKVAEQLGGEKVLEQFDFVFPENGL   75 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~----~i~~~~~~~~l~~l~~~-i~~~iaTGR~---~~~~~~~~~~~~~~~~~~~~i~~NGa   75 (175)
                      +|+||+||||||++++.    +..+.++++ |++|+++ +.|++||||+   +..+..++...++..   ++|+.|+-
T Consensus         3 ~k~i~~DlDGTL~~~~~~~i~~~~~~~~~a-l~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~---~~I~~n~P   76 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYPRIGEEIPFAVET-LKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF---YAANKDYP   76 (142)
T ss_dssp             CCEEEECCBTTTBCSCTTSCCCBCTTHHHH-HHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC---SEESSSST
T ss_pred             CeEEEEECcCCCCCCCCccccccCHHHHHH-HHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe---EEEEcCCc
Confidence            68999999999999764    345788999 9999999 9999999998   556677777766531   46777754

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.41  E-value=8.9e-14  Score=107.77  Aligned_cols=73  Identities=21%  Similarity=0.185  Sum_probs=59.5

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      ..+|+|+|||||||+++++ +.++++++ |++|+++ ++|++|||   |+...+.+.++.+|+....+.+++.||+.+.
T Consensus         6 ~~~kli~~DlDGTLl~~~~-~~~~~~~a-i~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~   82 (268)
T 3qgm_A            6 PDKKGYIIDIDGVIGKSVT-PIPEGVEG-VKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATAR   82 (268)
T ss_dssp             CCCSEEEEECBTTTEETTE-ECHHHHHH-HHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHH
T ss_pred             ccCCEEEEcCcCcEECCCE-eCcCHHHH-HHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHHH
Confidence            4689999999999999876 55789999 9999999 99999999   7777787788776654333468888887553

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.25  E-value=1.4e-12  Score=101.13  Aligned_cols=73  Identities=19%  Similarity=0.227  Sum_probs=60.0

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcccccceEEecCCceee
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      .++|.|+|||||||+++ +++++.++++ |++++++ ++|++||   ||++..+.+.++.+|+......+++.||+.+.
T Consensus        15 ~~~~~v~~DlDGTLl~~-~~~~~~~~~~-l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~~   91 (271)
T 1vjr_A           15 DKIELFILDMDGTFYLD-DSLLPGSLEF-LETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAE   91 (271)
T ss_dssp             GGCCEEEECCBTTTEET-TEECTTHHHH-HHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHHH
T ss_pred             cCCCEEEEcCcCcEEeC-CEECcCHHHH-HHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHHH
Confidence            36799999999999998 4578899999 9999999 9999999   99999998888776653222357888887653

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.13  E-value=1.8e-11  Score=93.80  Aligned_cols=73  Identities=14%  Similarity=0.082  Sum_probs=57.7

Q ss_pred             CcceEEEEecCCCccCC---CCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          4 RANTICLFDVDGTLTQP---RQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~---~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      ..+|+|+|||||||+++   ++.+++.+.++ +++++++ +.|+++|   ||+...+...+..+++......+++.||+.
T Consensus        10 ~~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a-~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~~~~~~~   88 (271)
T 2x4d_A           10 AGVRGVLLDISGVLYDSGAGGGTAIAGSVEA-VARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVTAPAPAA   88 (271)
T ss_dssp             TTCCEEEECCBTTTEECCTTTCEECTTHHHH-HHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEECHHHHH
T ss_pred             hcCCEEEEeCCCeEEecCCCCCccCcCHHHH-HHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHeecHHHHH
Confidence            35899999999999997   45688899999 9999999 9999999   999998887776655432223466767664


Q ss_pred             e
Q psy16481         77 A   77 (175)
Q Consensus        77 i   77 (175)
                      +
T Consensus        89 ~   89 (271)
T 2x4d_A           89 C   89 (271)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.11  E-value=5.1e-11  Score=91.17  Aligned_cols=74  Identities=20%  Similarity=0.197  Sum_probs=51.6

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcccccceEEecCCce
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVLEQFDFVFPENGLV   76 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~~~~~~~i~~NGa~   76 (175)
                      |.+..+|+|+|||||||+++++.+ +++.++ +++++++ +.|+++|   ||+...+...+...|+......+++.||+.
T Consensus         2 ~~~~~ik~i~fDlDGTLld~~~~~-~~~~~a-i~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~   79 (259)
T 2ho4_A            2 AARRALKAVLVDLNGTLHIEDAAV-PGAQEA-LKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTSLTAA   79 (259)
T ss_dssp             ----CCCEEEEESSSSSCC---CC-TTHHHH-HHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred             cchhhCCEEEEeCcCcEEeCCEeC-cCHHHH-HHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHeecHHHHH
Confidence            345678999999999999988766 677899 9999999 9999999   777777777766555432223466666653

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.09  E-value=8e-14  Score=112.04  Aligned_cols=95  Identities=7%  Similarity=-0.139  Sum_probs=67.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCH---HHHH---HHh--cCCCcccccceEEecCCc
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDM---NKVA---EQL--GGEKVLEQFDFVFPENGL   75 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~---~~~~---~~~--~~~~~~~~~~~~i~~NGa   75 (175)
                      .+|+|+|||||||++++..      ++ |.++..+ +.|++||||++   ..+.   .++  ..+++.   .++|++||+
T Consensus        20 ~~kli~fDlDGTLld~~~~------~~-l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~---~~~i~~nGa   89 (332)
T 1y8a_A           20 QGHMFFTDWEGPWILTDFA------LE-LCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLL---TPFLAAAGV   89 (332)
T ss_dssp             CCCEEEECSBTTTBCCCHH------HH-HHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHH---HHHHHHTTC
T ss_pred             CceEEEEECcCCCcCccHH------HH-HHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhhcCCc---CeEEEcCCc
Confidence            4799999999999998752      67 7777777 89999999998   6554   333  322111   147788999


Q ss_pred             eeeeCCeEeecc-chhhhhCHHHHHHHHHHHHHhccccccc
Q psy16481         76 VAYKNGKLFEKK-SIIDHMGEDKIQTFINYCLQHLSTVTLP  115 (175)
Q Consensus        76 ~i~~~~~~i~~~-~l~~~l~~~~~~~i~~~~~~~~~~~~~~  115 (175)
                      .++..++. +.. .+    +.+.+.++++.+++ +..+.++
T Consensus        90 ~i~~~~~~-~~~~~~----~~~~~~~~l~~l~~-g~~~~i~  124 (332)
T 1y8a_A           90 KNRDVERI-AELSAK----FVPDAEKAMATLQE-RWTPVVI  124 (332)
T ss_dssp             CHHHHHHH-HHHHCC----BCTTHHHHHHHHHT-TCEEEEE
T ss_pred             EEEECCeE-eeccCC----CHHHHHHHHHHHHc-CCcEEEE
Confidence            98754444 333 23    67788999999988 6554343

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.06  E-value=3.4e-11  Score=93.34  Aligned_cols=71  Identities=14%  Similarity=0.155  Sum_probs=56.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH---HHHhcCCCcccccceEEecCCceee
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV---AEQLGGEKVLEQFDFVFPENGLVAY   78 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~---~~~~~~~~~~~~~~~~i~~NGa~i~   78 (175)
                      +|+|+||+||||++.+..+ +.+.++ |++++++ +.++++|||+....   .+.+..+|+....+.+++.||+.+.
T Consensus         1 ik~i~~D~DGtL~~~~~~~-~~~~~~-l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~   75 (263)
T 1zjj_A            1 MVAIIFDMDGVLYRGNRAI-PGVREL-IEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL   75 (263)
T ss_dssp             CEEEEEECBTTTEETTEEC-TTHHHH-HHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred             CeEEEEeCcCceEeCCEeC-ccHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence            4899999999999987766 788999 9999998 99999999997543   4444455554333568888988764

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=98.98  E-value=1.7e-10  Score=86.99  Aligned_cols=68  Identities=13%  Similarity=0.173  Sum_probs=52.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcccccceEEecCCc
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVLEQFDFVFPENGL   75 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~~~~~~~i~~NGa   75 (175)
                      +|+|+|||||||+++++.+++. .++ +++++++ +.++++|   ||+...+.+.+...++......++..+|+
T Consensus         3 ~k~i~fDlDGTLl~~~~~~~~~-~~~-~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~   74 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDNVAVPGA-AEF-LHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMA   74 (250)
T ss_dssp             CCEEEEECBTTTEETTEECTTH-HHH-HHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGEEEHHHH
T ss_pred             ccEEEEcCcceEEeCCEeCcCH-HHH-HHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHH
Confidence            7999999999999999888877 888 9999888 9999999   99999887776554432111235554553

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=98.93  E-value=2.1e-10  Score=90.80  Aligned_cols=71  Identities=20%  Similarity=0.160  Sum_probs=54.9

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCcc-cccceEEecCCcee
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKVL-EQFDFVFPENGLVA   77 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~~-~~~~~~i~~NGa~i   77 (175)
                      .+|+|+|||||||++++. +.+.+.++ |++|+++ ++|+++|   ||+...+...+..+++. ...+.+++.||+.+
T Consensus        20 ~~k~i~~D~DGTL~~~~~-~~~~~~~~-l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~~~~~   95 (306)
T 2oyc_A           20 RAQGVLFDCDGVLWNGER-AVPGAPEL-LERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAA   95 (306)
T ss_dssp             HCSEEEECSBTTTEETTE-ECTTHHHH-HHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHHHHHH
T ss_pred             hCCEEEECCCCcEecCCc-cCcCHHHH-HHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHHHHHH
Confidence            579999999999998765 56789999 9999999 9999999   68888887777766543 22234666665443

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=98.92  E-value=3.3e-10  Score=83.20  Aligned_cols=58  Identities=21%  Similarity=0.209  Sum_probs=49.5

Q ss_pred             CcceEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+|+|+||+||||+++..          .+++++.++ |++|+++ ++++++|||+...+...++.+++
T Consensus         6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~-l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl   74 (180)
T 1k1e_A            6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLG-IKMLMDADIQVAVLSGRDSPILRRRIADLGI   74 (180)
T ss_dssp             GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHH-HHHHHHTTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred             hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHH-HHHHHHCCCeEEEEeCCCcHHHHHHHHHcCC
Confidence            4589999999999999742          467788999 9999999 99999999999988887777553

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=98.89  E-value=1.1e-09  Score=80.51  Aligned_cols=59  Identities=22%  Similarity=0.234  Sum_probs=48.8

Q ss_pred             cceEEEEecCCCccC------------------------CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCC-HHHHHHHhc
Q psy16481          5 ANTICLFDVDGTLTQ------------------------PRQKAQNETLDFLLKKLKPL-SHLAIVSGSD-MNKVAEQLG   58 (175)
Q Consensus         5 ~~kli~~DlDGTLl~------------------------~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~-~~~~~~~~~   58 (175)
                      .+|+|+||+||||++                        ...++.+.+.++ |++|+++ ++++++||++ ...+...++
T Consensus        26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~-L~~L~~~G~~v~ivT~~~~~~~~~~~l~  104 (187)
T 2wm8_A           26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEV-LKRLQSLGVPGAAASRTSEIEGANQLLE  104 (187)
T ss_dssp             SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHH-HHHHHHHTCCEEEEECCSCHHHHHHHHH
T ss_pred             ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHH-HHHHHHCCceEEEEeCCCChHHHHHHHH
Confidence            479999999999993                        334778899999 9999998 9999999999 677777777


Q ss_pred             CCCccc
Q psy16481         59 GEKVLE   64 (175)
Q Consensus        59 ~~~~~~   64 (175)
                      .+++..
T Consensus       105 ~~gl~~  110 (187)
T 2wm8_A          105 LFDLFR  110 (187)
T ss_dssp             HTTCTT
T ss_pred             HcCcHh
Confidence            665543

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=98.86  E-value=8.5e-10  Score=85.96  Aligned_cols=59  Identities=17%  Similarity=0.238  Sum_probs=47.9

Q ss_pred             CCcceEEEEecCCCccCCC-------------------------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCH---HHH
Q psy16481          3 CRANTICLFDVDGTLTQPR-------------------------QKAQNETLDFLLKKLKPL-SHLAIVSGSDM---NKV   53 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~-------------------------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~---~~~   53 (175)
                      ..++|+|+|||||||+++.                         ..+.|.+.++ |++|+++ +++++||||+.   ..+
T Consensus        56 ~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~-L~~L~~~Gi~i~iaTnr~~~~~~~~  134 (258)
T 2i33_A           56 TEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDF-LKYTESKGVDIYYISNRKTNQLDAT  134 (258)
T ss_dssp             CSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHH-HHHHHHTTCEEEEEEEEEGGGHHHH
T ss_pred             CCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHH-HHHHHHCCCEEEEEcCCchhHHHHH
Confidence            4578999999999999984                         5678899999 9999999 99999999994   344


Q ss_pred             HHHhcCCCc
Q psy16481         54 AEQLGGEKV   62 (175)
Q Consensus        54 ~~~~~~~~~   62 (175)
                      ...+..+|+
T Consensus       135 ~~~L~~~Gl  143 (258)
T 2i33_A          135 IKNLERVGA  143 (258)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHcCC
Confidence            555554443

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=98.83  E-value=8.4e-10  Score=85.03  Aligned_cols=74  Identities=14%  Similarity=0.152  Sum_probs=54.5

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhc---C-CCcccccceEEecCCc
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLG---G-EKVLEQFDFVFPENGL   75 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~---~-~~~~~~~~~~i~~NGa   75 (175)
                      |+. .+|+|+|||||||++++..+ +.+.++ |++++++ +.++++|||+.........   . +++....+.+++.||+
T Consensus         1 M~~-~~k~v~fDlDGTL~~~~~~~-~~~~~~-l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~   77 (264)
T 1yv9_A            1 MSL-DYQGYLIDLDGTIYLGKEPI-PAGKRF-VERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLA   77 (264)
T ss_dssp             -CC-SCCEEEECCBTTTEETTEEC-HHHHHH-HHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHH
T ss_pred             CCc-cCCEEEEeCCCeEEeCCEEC-cCHHHH-HHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHH
Confidence            443 48999999999999988777 688899 9999988 9999999998876544332   2 4443222357777777


Q ss_pred             ee
Q psy16481         76 VA   77 (175)
Q Consensus        76 ~i   77 (175)
                      .+
T Consensus        78 ~~   79 (264)
T 1yv9_A           78 TI   79 (264)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=98.81  E-value=2.1e-09  Score=77.04  Aligned_cols=57  Identities=25%  Similarity=0.258  Sum_probs=48.2

Q ss_pred             cceEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+|+|+||+||||++++.          .+++.+.++ |++|+++ ++++++|||+...+...++.+++
T Consensus         8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl   75 (162)
T 2p9j_A            8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIG-IKLLQKMGITLAVISGRDSAPLITRLKELGV   75 (162)
T ss_dssp             HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHH-HHHHHTTTCEEEEEESCCCHHHHHHHHHTTC
T ss_pred             ceeEEEEecCcceECCceeecCCCceeeeecccHHHH-HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCC
Confidence            479999999999998543          246678899 9999999 99999999999988888877653

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=98.76  E-value=2.6e-09  Score=83.33  Aligned_cols=58  Identities=16%  Similarity=0.130  Sum_probs=48.6

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHhcCCCcc
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQLGGEKVL   63 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~~~~~~~   63 (175)
                      ..+|+|+||+||||++.+. +.+.+.++ |++++++ +.++++||   |+...+...+..+++.
T Consensus        12 ~~~k~i~~D~DGtL~~~~~-~~~~~~~~-l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~   73 (284)
T 2hx1_A           12 PKYKCIFFDAFGVLKTYNG-LLPGIENT-FDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF   73 (284)
T ss_dssp             GGCSEEEECSBTTTEETTE-ECTTHHHH-HHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred             hcCCEEEEcCcCCcCcCCe-eChhHHHH-HHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence            3589999999999999866 45788999 9999999 99999995   8888887777766543

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=98.61  E-value=7.7e-09  Score=71.38  Aligned_cols=64  Identities=17%  Similarity=0.052  Sum_probs=47.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      +|+|+||+||||.+ ...+.+...++ |++|+++ ++++++|+++...+...+..+++...++.+++
T Consensus         2 ~k~i~~D~DgtL~~-~~~~~~~~~~~-l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~   66 (137)
T 2pr7_A            2 MRGLIVDYAGVLDG-TDEDQRRWRNL-LAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL   66 (137)
T ss_dssp             CCEEEECSTTTTSS-CHHHHHHHHHH-HHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEE
T ss_pred             CcEEEEeccceecC-CCccCccHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEE
Confidence            58999999999943 34677889999 9999999 99999999988876555544333223344443

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=98.61  E-value=4.4e-08  Score=73.45  Aligned_cols=58  Identities=19%  Similarity=0.298  Sum_probs=47.8

Q ss_pred             CcceEEEEecCCCccCCC--------CCCCHHHHHHHHHhhCCC-eEEEEEcCCC---------------HHHHHHHhcC
Q psy16481          4 RANTICLFDVDGTLTQPR--------QKAQNETLDFLLKKLKPL-SHLAIVSGSD---------------MNKVAEQLGG   59 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~--------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~---------------~~~~~~~~~~   59 (175)
                      +.+|+++||+||||++..        .++.+...++ |++|+++ ++++++|+++               ...+...++.
T Consensus        23 ~~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~-L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~  101 (211)
T 2gmw_A           23 KSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDA-MRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLAD  101 (211)
T ss_dssp             -CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHH-HHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHH-HHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHH
Confidence            457999999999999876        3677899999 9999999 9999999999               3566666666


Q ss_pred             CCc
Q psy16481         60 EKV   62 (175)
Q Consensus        60 ~~~   62 (175)
                      +++
T Consensus       102 ~gl  104 (211)
T 2gmw_A          102 RDV  104 (211)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            554

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=98.59  E-value=2.9e-08  Score=72.01  Aligned_cols=44  Identities=16%  Similarity=0.249  Sum_probs=39.1

Q ss_pred             ceEEEEecCCCccCCCC---------CCCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          6 NTICLFDVDGTLTQPRQ---------KAQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~---------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      +|+|+||+||||++...         ++.+.+.++ |++|+++ ++++++|+++.
T Consensus         1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~-l~~L~~~g~~~~i~Tn~~~   54 (179)
T 3l8h_A            1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQA-IARLTQADWTVVLATNQSG   54 (179)
T ss_dssp             CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHH-HHHHHHTTCEEEEEEECTT
T ss_pred             CCEEEEcCCCccccCCCccCCCHHHceECcCHHHH-HHHHHHCCCEEEEEECCCc
Confidence            58999999999998632         577899999 9999999 99999999985

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=98.57  E-value=3.1e-08  Score=72.30  Aligned_cols=53  Identities=15%  Similarity=0.166  Sum_probs=42.4

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHH----------HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhc
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNE----------TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLG   58 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~----------~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~   58 (175)
                      .+.+|+|++|+||||++....+++.          ...+ |+.|+++ ++++++||+  ..+...++
T Consensus         6 ~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~-L~~Lk~~Gi~~~I~Tg~--~~~~~~l~   69 (168)
T 3ewi_A            6 LKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIG-ISLLKKSGIEVRLISER--ACSKQTLS   69 (168)
T ss_dssp             -CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHH-HHHHHHTTCEEEEECSS--CCCHHHHH
T ss_pred             HhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHH-HHHHHHCCCEEEEEeCc--HHHHHHHH
Confidence            3578999999999999977666554          3457 9999999 999999999  55566666

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=98.56  E-value=3.9e-08  Score=73.21  Aligned_cols=57  Identities=16%  Similarity=0.086  Sum_probs=44.3

Q ss_pred             CCCCcceEEEEecCCCccCCCC-------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhc
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQ-------------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLG   58 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~-------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~   58 (175)
                      |....+|+|+||+||||++...             .+-+...+. |+.|+++ ++++++||++...+....+
T Consensus         1 ~~~~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~-L~~L~~~g~~~~i~T~~~~~~~~~~~~   71 (196)
T 2oda_A            1 MPLPTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNA-LKALRDQGMPCAWIDELPEALSTPLAA   71 (196)
T ss_dssp             ----CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHH-HHHHHHHTCCEEEECCSCHHHHHHHHT
T ss_pred             CCCCcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHH-HHHHHHCCCEEEEEcCChHHHHHHhcC
Confidence            7778899999999999998331             445788898 9999998 9999999999887755554

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=98.51  E-value=1.3e-07  Score=69.54  Aligned_cols=66  Identities=23%  Similarity=0.357  Sum_probs=50.7

Q ss_pred             cceEEEEecCCCccCCC--------------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCH---HHHHHHhcCCCccccc
Q psy16481          5 ANTICLFDVDGTLTQPR--------------QKAQNETLDFLLKKLKPL-SHLAIVSGSDM---NKVAEQLGGEKVLEQF   66 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~--------------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~---~~~~~~~~~~~~~~~~   66 (175)
                      .+|+|+||+||||++..              -++-+...++ |++|+++ ++++++|+++.   ..+...++.+|+...+
T Consensus         2 ~ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~-L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f   80 (189)
T 3ib6_A            2 SLTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKET-LEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF   80 (189)
T ss_dssp             -CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHH-HHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE
T ss_pred             CceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHH-HHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe
Confidence            47999999999996621              2667888999 9999999 99999999876   6677777776654445


Q ss_pred             ceEEe
Q psy16481         67 DFVFP   71 (175)
Q Consensus        67 ~~~i~   71 (175)
                      +.+++
T Consensus        81 d~i~~   85 (189)
T 3ib6_A           81 DFIYA   85 (189)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            44544

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=98.50  E-value=5.3e-08  Score=71.82  Aligned_cols=65  Identities=20%  Similarity=0.295  Sum_probs=49.6

Q ss_pred             CCCCcceEEEEecCCCccCCCC-----------------------------------------------CCCHHHHHHHH
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQ-----------------------------------------------KAQNETLDFLL   33 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~-----------------------------------------------~i~~~~~~~~l   33 (175)
                      |++..+|+|+|||||||+++..                                               .+.+...+. |
T Consensus         1 M~~~~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l   79 (205)
T 3m9l_A            1 MSLSEIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVEL-V   79 (205)
T ss_dssp             CCGGGCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHH-H
T ss_pred             CCcccCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHH-H
Confidence            8888999999999999997421                                               122334566 8


Q ss_pred             HhhCCC-eEEEEEcCCCHHHHHHHhcCCCccccc
Q psy16481         34 KKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQF   66 (175)
Q Consensus        34 ~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~   66 (175)
                      +.|+++ +.++++|+.+...+...+..+++...+
T Consensus        80 ~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f  113 (205)
T 3m9l_A           80 RELAGRGYRLGILTRNARELAHVTLEAIGLADCF  113 (205)
T ss_dssp             HHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGS
T ss_pred             HHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhc
Confidence            889888 999999999988887777766554333

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=98.50  E-value=3.4e-08  Score=70.79  Aligned_cols=59  Identities=19%  Similarity=0.146  Sum_probs=45.4

Q ss_pred             CCcceEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          3 CRANTICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      |+.+|+|+||+||||+++..          .+......+ |++|+++ ++++++||++...+...++.+++
T Consensus         1 m~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl   70 (164)
T 3e8m_A            1 MKEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAG-IFWAHNKGIPVGILTGEKTEIVRRRAEKLKV   70 (164)
T ss_dssp             CCCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHH-HHHHHHTTCCEEEECSSCCHHHHHHHHHTTC
T ss_pred             CCcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHH-HHHHHHCCCEEEEEeCCChHHHHHHHHHcCC
Confidence            35789999999999999541          122223345 8888888 99999999999988888877654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=98.49  E-value=3.7e-09  Score=79.07  Aligned_cols=102  Identities=15%  Similarity=0.049  Sum_probs=60.3

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHh-hCCC--eEEEEEcCCCHHH-HHHHhcCCCcccc--cceEEecCCceeee
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKK-LKPL--SHLAIVSGSDMNK-VAEQLGGEKVLEQ--FDFVFPENGLVAYK   79 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~-l~~~--i~~~iaTGR~~~~-~~~~~~~~~~~~~--~~~~i~~NGa~i~~   79 (175)
                      +|+|+|||||||++++..+.+...++ +++ +...  ..+..++||+... +...+..+++...  ...+...+|+....
T Consensus         4 ~k~iifDlDGTL~d~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (234)
T 2hcf_A            4 RTLVLFDIDGTLLKVESMNRRVLADA-LIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIAL   82 (234)
T ss_dssp             CEEEEECCBTTTEEECTHHHHHHHHH-HHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcCCCCcccCccchHHHHHHH-HHHHhCCCCccchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHHH
Confidence            79999999999999988888888888 888 4544  3677899999887 5556665443111  00133445544321


Q ss_pred             CCeEee-ccchhhhhCHHHHHHHHHHHHHh-cccc
Q psy16481         80 NGKLFE-KKSIIDHMGEDKIQTFINYCLQH-LSTV  112 (175)
Q Consensus        80 ~~~~i~-~~~l~~~l~~~~~~~i~~~~~~~-~~~~  112 (175)
                      ..+.+. ....    ..+.+.++++.+++. +..+
T Consensus        83 ~~~~~~~~~~~----~~~~~~~~l~~l~~~~g~~~  113 (234)
T 2hcf_A           83 FRERARREDIT----LLEGVRELLDALSSRSDVLL  113 (234)
T ss_dssp             HHHHCCGGGEE----ECTTHHHHHHHHHTCTTEEE
T ss_pred             HHHHhccCCCC----cCCCHHHHHHHHHhCCCceE
Confidence            111111 1111    334567777877776 5443

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=98.43  E-value=8.9e-07  Score=66.28  Aligned_cols=37  Identities=14%  Similarity=0.066  Sum_probs=29.8

Q ss_pred             CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         25 QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        25 ~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      -+...+. |+.|+++ +.++|+||.+...+...+..+|+
T Consensus        94 ~~g~~~~-l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~  131 (232)
T 3fvv_A           94 TVQAVDV-VRGHLAAGDLCALVTATNSFVTAPIARAFGV  131 (232)
T ss_dssp             CHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHTTC
T ss_pred             CHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            4556666 8888888 99999999998888877777664

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=98.43  E-value=2.2e-08  Score=74.03  Aligned_cols=58  Identities=28%  Similarity=0.272  Sum_probs=44.9

Q ss_pred             CcceEEEEecCCCccCCCCCCCH----------HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQN----------ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~----------~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|+|+||+||||+++...+.+          ..-.+ |++|+++ ++++++||++...+...++.+++
T Consensus        17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~-l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl   85 (189)
T 3mn1_A           17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQG-IKMLIASGVTTAIISGRKTAIVERRAKSLGI   85 (189)
T ss_dssp             HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHH-HHHHHHTTCEEEEECSSCCHHHHHHHHHHTC
T ss_pred             HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHH-HHHHHHCCCEEEEEECcChHHHHHHHHHcCC
Confidence            46899999999999996532221          11236 9999998 99999999999988888777654

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=98.37  E-value=2e-07  Score=69.70  Aligned_cols=54  Identities=19%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             CCCcceEEEEecCCCccCCCCCCCHHH-HHHHHHhhCCC-eEEEEEcCCCHHHHHHH
Q psy16481          2 TCRANTICLFDVDGTLTQPRQKAQNET-LDFLLKKLKPL-SHLAIVSGSDMNKVAEQ   56 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~~~~i~~~~-~~~~l~~l~~~-i~~~iaTGR~~~~~~~~   56 (175)
                      +|..+|+|+||+||||++++..+.+.. .++ ++++... ..+..++||+.......
T Consensus        21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~-~~~~g~~~~~~~~~~g~~~~~~~~~   76 (231)
T 3kzx_A           21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQV-LDQMGYKNIDLDSIPNSTIPKYLIT   76 (231)
T ss_dssp             CCCCCSEEEECTBTTTEETTSSCCHHHHHHH-HHHTTCCCCCCTTSCTTTHHHHHHH
T ss_pred             ccCCCCEEEECCCCCCcCCchhHHHHHHHHH-HHHcCCCHHHHHHHhCccHHHHHHH
Confidence            355789999999999999999999999 898 9999887 88888899998775433

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=98.35  E-value=1.3e-07  Score=71.83  Aligned_cols=51  Identities=20%  Similarity=0.149  Sum_probs=40.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEE--EE-------------EcCCCHHHHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHL--AI-------------VSGSDMNKVAEQ   56 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~--~i-------------aTGR~~~~~~~~   56 (175)
                      .+|+|+|||||||++++..+.+...++ ++++++. +.+  .+             ++||+...+...
T Consensus        12 ~~k~iifDlDGTL~d~~~~~~~~~~~~-~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   78 (251)
T 2pke_A           12 AIQLVGFDGDDTLWKSEDYYRTAEADF-EAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLS   78 (251)
T ss_dssp             SCCEEEECCBTTTBCCHHHHHHHHHHH-HHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHH
T ss_pred             ceeEEEEeCCCCCccCcHhHHHHHHHH-HHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHH
Confidence            479999999999999988888888888 9988887 766  23             579988765443

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=98.33  E-value=2.9e-07  Score=67.75  Aligned_cols=58  Identities=16%  Similarity=0.149  Sum_probs=44.9

Q ss_pred             CcceEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|+|+||+||||++...          .+......+ |++|+++ +.++++||++...+...++.+++
T Consensus        24 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~-l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl   92 (188)
T 2r8e_A           24 ENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYG-IRCALTSDIEVAIITGRKAKLVEDRCATLGI   92 (188)
T ss_dssp             HTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHH-HHHHHTTTCEEEEECSSCCHHHHHHHHHHTC
T ss_pred             hcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHH-HHHHHHCCCeEEEEeCCChHHHHHHHHHcCC
Confidence            4679999999999998432          223334457 9999998 99999999999888877776543

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=98.32  E-value=3.9e-07  Score=68.62  Aligned_cols=45  Identities=22%  Similarity=0.263  Sum_probs=31.9

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      +...+. |++|+++ +.++++|+++...+...++.+++...++.+++
T Consensus       108 ~~~~~~-l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~  153 (240)
T 2no4_A          108 PDAAET-LEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLS  153 (240)
T ss_dssp             TTHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             CCHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEE
Confidence            344566 8888888 99999999998887777776655443444443

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=98.32  E-value=5.2e-08  Score=71.20  Aligned_cols=57  Identities=21%  Similarity=0.120  Sum_probs=43.0

Q ss_pred             CcceEEEEecCCCccCCCCCC----------CHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481          4 RANTICLFDVDGTLTQPRQKA----------QNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i----------~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      +.+|+|+||+||||++....+          .-..-.. |++|+++ ++++++||++...+...++.++
T Consensus        10 ~~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~-l~~L~~~g~~~~i~T~~~~~~~~~~~~~lg   77 (176)
T 3mmz_A           10 EDIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLG-IAALRKSGLTMLILSTEQNPVVAARARKLK   77 (176)
T ss_dssp             GGCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHH-HHHHHHTTCEEEEEESSCCHHHHHHHHHHT
T ss_pred             hcCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHH-HHHHHHCCCeEEEEECcChHHHHHHHHHcC
Confidence            458999999999999943221          1111224 8888888 9999999999998888887764

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=98.29  E-value=4.7e-09  Score=78.33  Aligned_cols=36  Identities=19%  Similarity=0.033  Sum_probs=30.7

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL   39 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~   39 (175)
                      |+|  +|+|+|||||||++++..+++...++ ++++...
T Consensus         1 M~m--~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~   36 (235)
T 2om6_A            1 MRE--VKLVTFDVWNTLLDLNIMLDEFSHQL-AKISGLH   36 (235)
T ss_dssp             CCC--CCEEEECCBTTTBCHHHHHHHHHHHH-HHHHTCC
T ss_pred             CCC--ceEEEEeCCCCCCCcchhHHHHHHHH-HHHcCCC
Confidence            554  79999999999999888888888888 9888765

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=98.28  E-value=2.1e-07  Score=69.84  Aligned_cols=57  Identities=19%  Similarity=0.200  Sum_probs=48.2

Q ss_pred             cceEEEEecCCCccCC--------CCCCCHHHHHHHHHhhCCC-eEEEEEcCCCH---------------HHHHHHhcCC
Q psy16481          5 ANTICLFDVDGTLTQP--------RQKAQNETLDFLLKKLKPL-SHLAIVSGSDM---------------NKVAEQLGGE   60 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~--------~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~---------------~~~~~~~~~~   60 (175)
                      .+|++++|+||||++.        +.++.+...++ |++|+++ ++++++|+++.               ..+...++.+
T Consensus        30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~-L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~  108 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPA-IATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE  108 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHH-HHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred             cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHH-HHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc
Confidence            4689999999999987        35788999999 9999998 99999999998               5666667665


Q ss_pred             Cc
Q psy16481         61 KV   62 (175)
Q Consensus        61 ~~   62 (175)
                      ++
T Consensus       109 gl  110 (218)
T 2o2x_A          109 GV  110 (218)
T ss_dssp             TC
T ss_pred             CC
Confidence            53

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=98.27  E-value=3.2e-07  Score=68.55  Aligned_cols=44  Identities=25%  Similarity=0.349  Sum_probs=30.6

Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ...+. |+.|+++ +.++++|+++...+...++.+++...++.+++
T Consensus        99 ~~~~~-l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  143 (232)
T 1zrn_A           99 EVPDS-LRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLS  143 (232)
T ss_dssp             THHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             cHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEE
Confidence            34455 7788888 99999999998877777766554433444443

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=98.23  E-value=3.5e-07  Score=68.80  Aligned_cols=48  Identities=15%  Similarity=0.159  Sum_probs=37.9

Q ss_pred             CCcceEEEEecCCCccCCCC----------------------------------CCCHHHHHHHHHhhCCC-eEEEEEcC
Q psy16481          3 CRANTICLFDVDGTLTQPRQ----------------------------------KAQNETLDFLLKKLKPL-SHLAIVSG   47 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~----------------------------------~i~~~~~~~~l~~l~~~-i~~~iaTG   47 (175)
                      ...+|+|+|||||||+++..                                  ...+...+. |++|+++ ++++++||
T Consensus        34 ~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-l~~L~~~G~~l~ivTn  112 (211)
T 2b82_A           34 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQL-IDMHVRRGDAIFFVTG  112 (211)
T ss_dssp             TCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHH-HHHHHHHTCEEEEEEC
T ss_pred             cCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHH-HHHHHHCCCEEEEEcC
Confidence            34589999999999998532                                  123467787 9999988 99999999


Q ss_pred             CCHH
Q psy16481         48 SDMN   51 (175)
Q Consensus        48 R~~~   51 (175)
                      |+..
T Consensus       113 ~~~~  116 (211)
T 2b82_A          113 RSPT  116 (211)
T ss_dssp             SCCC
T ss_pred             CcHH
Confidence            9755

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=98.21  E-value=3.8e-07  Score=68.73  Aligned_cols=58  Identities=14%  Similarity=0.127  Sum_probs=44.2

Q ss_pred             CcceEEEEecCCCccCCCCC----------CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPRQK----------AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~----------i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|+|+||+||||+++...          +....-.. |++|+++ ++++++||++...+...++.+++
T Consensus        47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~-L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi  115 (211)
T 3ij5_A           47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYG-IRCLITSDIDVAIITGRRAKLLEDRANTLGI  115 (211)
T ss_dssp             TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHH-HHHHHHTTCEEEEECSSCCHHHHHHHHHHTC
T ss_pred             hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            46799999999999986421          11122226 8999998 99999999999988888877654

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=98.19  E-value=1.7e-06  Score=64.45  Aligned_cols=43  Identities=19%  Similarity=0.323  Sum_probs=31.2

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ..+. |+.|+++ ++++++|+.+...+...+..+++...++.+++
T Consensus       104 ~~~~-l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  147 (233)
T 3umb_A          104 NVPV-LRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLS  147 (233)
T ss_dssp             HHHH-HHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEE
T ss_pred             HHHH-HHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEE
Confidence            3455 7888888 99999999998888777777665444444443

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=98.16  E-value=6.2e-09  Score=76.54  Aligned_cols=92  Identities=18%  Similarity=0.160  Sum_probs=51.1

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH---HHHhcCCCcccccceEEecCCceeee
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV---AEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~---~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      +.+|+|+|||||||+++.      +.++ +.+.... ..+..+|||.....   ...+..        .....||..+..
T Consensus         3 ~~~k~i~fDlDGTL~d~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~   67 (211)
T 1l7m_A            3 KKKKLILFDFDSTLVNNE------TIDE-IAREAGVEEEVKKITKEAMEGKLNFEQSLRK--------RVSLLKDLPIEK   67 (211)
T ss_dssp             CCCEEEEEECCCCCBSSC------HHHH-HHHHTTCHHHHHHHHHHHHTTSSCHHHHHHH--------HHHTTTTCBHHH
T ss_pred             cCCcEEEEeCCCCCCCcc------HHHH-HHHHhCcHHHHHHHHHHHHcCCCCHHHHHHH--------HHHHhcCCCHHH
Confidence            367999999999999984      3466 5555555 55666777755432   111111        012236654322


Q ss_pred             CCeEeeccchhhhhCHHHHHHHHHHHHHhccccccc
Q psy16481         80 NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLP  115 (175)
Q Consensus        80 ~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~  115 (175)
                      ..+.+.+..+    .+ .+.++++.+++.+..+.++
T Consensus        68 ~~~~~~~~~l----~~-~~~~~l~~l~~~g~~~~i~   98 (211)
T 1l7m_A           68 VEKAIKRITP----TE-GAEETIKELKNRGYVVAVV   98 (211)
T ss_dssp             HHHHHHTCCB----CT-THHHHHHHHHHTTEEEEEE
T ss_pred             HHHHHHhCCC----Cc-cHHHHHHHHHHCCCEEEEE
Confidence            1222222222    33 5677888888876554443

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=98.16  E-value=1.6e-06  Score=63.09  Aligned_cols=58  Identities=19%  Similarity=0.240  Sum_probs=45.6

Q ss_pred             CcceEEEEecCCCccCCC-----------CCCCHHHHHHHHHhhCCC-eEEEEEcCC---------------CHHHHHHH
Q psy16481          4 RANTICLFDVDGTLTQPR-----------QKAQNETLDFLLKKLKPL-SHLAIVSGS---------------DMNKVAEQ   56 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~-----------~~i~~~~~~~~l~~l~~~-i~~~iaTGR---------------~~~~~~~~   56 (175)
                      +.+|+++||+||||+.+.           .++-|...++ |++|+++ ++++|+|+.               +...+...
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~-L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~   90 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQ-LLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI   90 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHH-HHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHH
T ss_pred             CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHH-HHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHH
Confidence            468999999999998762           3677889999 9999999 999999998               34455566


Q ss_pred             hcCCCc
Q psy16481         57 LGGEKV   62 (175)
Q Consensus        57 ~~~~~~   62 (175)
                      ++.+++
T Consensus        91 l~~~gl   96 (176)
T 2fpr_A           91 FTSQGV   96 (176)
T ss_dssp             HHHTTC
T ss_pred             HHHcCC
Confidence            666554

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=98.16  E-value=7.6e-07  Score=66.25  Aligned_cols=57  Identities=18%  Similarity=0.220  Sum_probs=45.9

Q ss_pred             cceEEEEecCCCccCCC----------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQPR----------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~----------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+|+|+||+||||+++.          ..+......+ |+.|+++ ++++++||++...+...++.+++
T Consensus        24 ~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~-l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi   91 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYG-VKALMNAGIEIAIITGRRSQIVENRMKALGI   91 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHH-HHHHHHTTCEEEEECSSCCHHHHHHHHHTTC
T ss_pred             CCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHH-HHHHHHCCCEEEEEECcCHHHHHHHHHHcCC
Confidence            58999999999999832          1344445566 8999998 99999999999998888887754

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=98.16  E-value=2.2e-06  Score=63.56  Aligned_cols=44  Identities=18%  Similarity=0.354  Sum_probs=29.8

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      +...+. |+.|+++ +.++++|+.+...+...+...++...++.++
T Consensus        99 ~~~~~~-l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~  143 (230)
T 3um9_A           99 ADVPQA-LQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLI  143 (230)
T ss_dssp             TTHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEE
T ss_pred             CCHHHH-HHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeE
Confidence            334556 7888888 9999999999887776666554433344443

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=98.14  E-value=4.5e-07  Score=66.87  Aligned_cols=48  Identities=25%  Similarity=0.294  Sum_probs=38.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-e---EEEEEcCCCHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-S---HLAIVSGSDMNKV   53 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i---~~~iaTGR~~~~~   53 (175)
                      .+|+|+||+||||++++..+.+...++ ++++... .   .+..++|++....
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~~~~   59 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDV-MASLGVDISRRNELPDTLGLRIDMV   59 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHH-HHHTTCCGGGGGGSCCCTTCCHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHH-HHHcCCCCChHHHHHHHhCCCHHHH
Confidence            489999999999999988888888888 8887654 3   3456789987764

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=98.14  E-value=2.1e-06  Score=63.27  Aligned_cols=37  Identities=14%  Similarity=0.011  Sum_probs=28.7

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL   63 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~   63 (175)
                      +...+. |+.|+++ ++++++|+.+...+...+..+++.
T Consensus        78 ~~~~~~-l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~  115 (217)
T 3m1y_A           78 EGALEL-VSALKEKNYKVVCFSGGFDLATNHYRDLLHLD  115 (217)
T ss_dssp             BTHHHH-HHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             CCHHHH-HHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc
Confidence            346677 9999999 999999999888777666655543

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=98.10  E-value=6.9e-06  Score=61.37  Aligned_cols=28  Identities=21%  Similarity=0.195  Sum_probs=20.5

Q ss_pred             HHHHHHHHHhhCCCeEEEEEcCCCHHHHH
Q psy16481         26 NETLDFLLKKLKPLSHLAIVSGSDMNKVA   54 (175)
Q Consensus        26 ~~~~~~~l~~l~~~i~~~iaTGR~~~~~~   54 (175)
                      +...+. |+.|+++++++++|+.+.....
T Consensus       115 ~~~~~~-l~~l~~~~~~~i~Sn~~~~~~~  142 (229)
T 4dcc_A          115 TYKLDL-LLKLREKYVVYLLSNTNDIHWK  142 (229)
T ss_dssp             HHHHHH-HHHHTTTSEEEEEECCCHHHHH
T ss_pred             HHHHHH-HHHHHhcCcEEEEECCChHHHH
Confidence            455566 7777766888888888877665

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=98.08  E-value=1.1e-06  Score=67.47  Aligned_cols=35  Identities=14%  Similarity=0.109  Sum_probs=24.2

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      +...+. |+.|+++ ++++++||++...+...++.++
T Consensus       147 ~~~~~~-l~~l~~~g~~~~i~T~~~~~~~~~~~~~~g  182 (280)
T 3skx_A          147 PESREA-ISKLKAIGIKCMMLTGDNRFVAKWVAEELG  182 (280)
T ss_dssp             TTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred             HhHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence            445566 7777777 7888888887777666665544

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=98.08  E-value=9.7e-08  Score=71.16  Aligned_cols=51  Identities=18%  Similarity=0.181  Sum_probs=43.7

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQL   57 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~   57 (175)
                      +|+|+||+||||++++..+++...++ ++.+.++ ..+..+|||.+..+...+
T Consensus         2 ik~i~fDlDGTL~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~   53 (230)
T 3vay_A            2 IKLVTFDLDDTLWDTAPAIVGAEAAL-RDWLAEQAPKLGPVPVEHLWEIRSRL   53 (230)
T ss_dssp             CCEEEECCBTTTBCSHHHHHHHHHHH-HHHHHHHCTTTCSCCHHHHHHHHHHH
T ss_pred             eeEEEecCcccCcCCchHHHHHHHHH-HHHHHHhcCcchhhHHHHHHHHHHHH
Confidence            79999999999999988888887787 8888887 777888999998876654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=98.06  E-value=2e-06  Score=63.55  Aligned_cols=58  Identities=19%  Similarity=0.153  Sum_probs=44.8

Q ss_pred             CcceEEEEecCCCccCCCC----------CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQPRQ----------KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+|+|+||+||||++...          .+....-.+ |+.|+++ ++++++||++...+...++.+++
T Consensus        17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~-l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl   85 (191)
T 3n1u_A           17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMG-LKLLMAAGIQVAIITTAQNAVVDHRMEQLGI   85 (191)
T ss_dssp             HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHH-HHHHHHTTCEEEEECSCCSHHHHHHHHHHTC
T ss_pred             hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHH-HHHHHHCCCeEEEEeCcChHHHHHHHHHcCC
Confidence            4689999999999998332          233333345 8889888 99999999999988887777654

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=98.03  E-value=4.4e-07  Score=66.88  Aligned_cols=51  Identities=20%  Similarity=0.174  Sum_probs=40.8

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-e---EEEEEcCCCHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-S---HLAIVSGSDMNKVAEQL   57 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i---~~~iaTGR~~~~~~~~~   57 (175)
                      +|+|+||+||||+++++.+++.+.++ ++++... .   .+..++|++...+...+
T Consensus         6 ~k~v~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~~~~~~~~   60 (225)
T 3d6j_A            6 YTVYLFDFDYTLADSSRGIVTCFRSV-LERHGYTGITDDMIKRTIGKTLEESFSIL   60 (225)
T ss_dssp             CSEEEECCBTTTEECHHHHHHHHHHH-HHHTTCCCCCHHHHHTTTTSCHHHHHHHH
T ss_pred             CCEEEEeCCCCCCCCHHHHHHHHHHH-HHHhCCCCCCHHHHHHHhCCcHHHHHHHH
Confidence            79999999999999988888888888 9988664 3   45567888887664443

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=98.00  E-value=3.3e-06  Score=68.45  Aligned_cols=67  Identities=16%  Similarity=0.124  Sum_probs=47.7

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCC---HHHHHHHhc-CCCcccccceEEe
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSD---MNKVAEQLG-GEKVLEQFDFVFP   71 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~---~~~~~~~~~-~~~~~~~~~~~i~   71 (175)
                      ..+.|.++||+||||++.+..+ +...++ |++|+++ +.++++|+++   .......+. .+|+....+.+++
T Consensus        10 ~~~~~~~l~D~DGvl~~g~~~~-p~a~~~-l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~t   81 (352)
T 3kc2_A           10 TSKKIAFAFDIDGVLFRGKKPI-AGASDA-LKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQ   81 (352)
T ss_dssp             --CCEEEEECCBTTTEETTEEC-TTHHHH-HHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEEC
T ss_pred             hccCCEEEEECCCeeEcCCeeC-cCHHHH-HHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEee
Confidence            3478999999999999988766 477899 9999998 9999999654   555545544 3444322234554

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=98.00  E-value=2.9e-06  Score=64.71  Aligned_cols=35  Identities=14%  Similarity=0.100  Sum_probs=27.2

Q ss_pred             CCCCcceEEEEecCCCccCCCC-CCCHHHHHHHHHhh
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQ-KAQNETLDFLLKKL   36 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~-~i~~~~~~~~l~~l   36 (175)
                      |..-.+|+|+|||||||+++++ .+.+...++ ++++
T Consensus         1 M~~m~ik~i~fDlDGTLld~~~~~~~~~~~~~-l~~~   36 (267)
T 1swv_A            1 MDRMKIEAVIFAWAGTTVDYGCFAPLEVFMEI-FHKR   36 (267)
T ss_dssp             ----CCCEEEECSBTTTBSTTCCTTHHHHHHH-HHTT
T ss_pred             CCCCCceEEEEecCCCEEeCCCccHHHHHHHH-HHHc
Confidence            4444589999999999999988 788888888 8775

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=97.99  E-value=3.6e-06  Score=69.54  Aligned_cols=44  Identities=27%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             cceEEEEecCCCccCCCC------------CCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ------------KAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      .+|+++||+||||+....            .+-+.+.++ |++|+++ ++++|+|+++
T Consensus        57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~-L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKK-LQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHH-HHHHHHTTCEEEEEEECH
T ss_pred             CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHH-HHHHHHCCCeEEEEeCCc
Confidence            579999999999987541            356889999 9999999 9999999965

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=97.99  E-value=1.1e-06  Score=65.33  Aligned_cols=37  Identities=30%  Similarity=0.342  Sum_probs=28.2

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      |+++.+|+|+||+||||+++...+.+...++ ++++..
T Consensus         1 M~~~~~k~i~fDlDGTL~~~~~~~~~~~~~~-~~~~g~   37 (233)
T 3s6j_A            1 MSLRPQTSFIFDLDGTLTDSVYQNVAAWKEA-LDAENI   37 (233)
T ss_dssp             ----CCCEEEECCBTTTEECHHHHHHHHHHH-HHHTTC
T ss_pred             CCCCcCcEEEEcCCCccccChHHHHHHHHHH-HHHcCC
Confidence            8888899999999999999977777777777 877654

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.97  E-value=1.4e-06  Score=64.46  Aligned_cols=36  Identities=25%  Similarity=0.287  Sum_probs=30.8

Q ss_pred             CCc-ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC
Q psy16481          3 CRA-NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL   39 (175)
Q Consensus         3 ~~~-~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~   39 (175)
                      |++ +|+|+|||||||++++..+++.+.++ ++.+.+.
T Consensus         4 M~~mik~i~fDlDGTL~~~~~~~~~~~~~~-~~~l~~~   40 (234)
T 3ddh_A            4 MKELIKVIAFDADDTLWSNEPFFQEVEKQY-TDLLKPY   40 (234)
T ss_dssp             CTTTCCEEEECCBTTTBCCHHHHHHHHHHH-HHHTGGG
T ss_pred             hhhcccEEEEeCCCCCccCcchHHHHHHHH-HHHHHhc
Confidence            456 89999999999999988888888777 8888765

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=97.94  E-value=1.4e-05  Score=61.66  Aligned_cols=46  Identities=15%  Similarity=0.090  Sum_probs=31.3

Q ss_pred             CHHHHHHHHHhhCCC-e--EEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         25 QNETLDFLLKKLKPL-S--HLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        25 ~~~~~~~~l~~l~~~-i--~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      -+...+. |+.|+++ +  +++++|+.....+...+..+++...++.+++
T Consensus       144 ~p~~~~~-L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~  192 (282)
T 3nuq_A          144 DIPLRNM-LLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTY  192 (282)
T ss_dssp             CHHHHHH-HHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEEC
T ss_pred             ChhHHHH-HHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEE
Confidence            3445566 7888887 8  9999999988877666665554344444443

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=97.94  E-value=1.5e-06  Score=65.20  Aligned_cols=35  Identities=26%  Similarity=0.280  Sum_probs=29.7

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |++..+|+|+||+||||++++..+.+...++ ++++
T Consensus        10 m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~   44 (254)
T 3umg_A           10 STGRNVRAVLFDTFGTVVDWRTGIATAVADY-AARH   44 (254)
T ss_dssp             TTCSBCCEEEECCBTTTBCHHHHHHHHHHHH-HHHT
T ss_pred             CCCCCceEEEEeCCCceecCchHHHHHHHHH-HHHh
Confidence            4556789999999999999887788888888 8876

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=97.92  E-value=2.4e-05  Score=59.35  Aligned_cols=41  Identities=20%  Similarity=0.246  Sum_probs=26.1

Q ss_pred             HHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         28 TLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        28 ~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      ..+. |+.|+ .+.++++|+.+...+...++.+++...++.++
T Consensus        98 ~~~~-l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~  138 (253)
T 1qq5_A           98 AAQC-LAELA-PLKRAILSNGAPDMLQALVANAGLTDSFDAVI  138 (253)
T ss_dssp             HHHH-HHHHT-TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEE
T ss_pred             HHHH-HHHHc-CCCEEEEeCcCHHHHHHHHHHCCchhhccEEE
Confidence            3444 66666 67888999988877766666655433344443

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=97.92  E-value=2.7e-06  Score=63.79  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=31.1

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      |.+..+|+|+|||||||+++...+.+...++ ++++..
T Consensus        18 ~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~   54 (247)
T 3dv9_A           18 YESIDLKAVLFDMDGVLFDSMPNHAESWHKI-MKRFGF   54 (247)
T ss_dssp             CSCCCCCEEEEESBTTTBCCHHHHHHHHHHH-HHHTTC
T ss_pred             CCCCCCCEEEECCCCccCcCHHHHHHHHHHH-HHHcCC
Confidence            5667799999999999999988887888888 887654

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=97.89  E-value=6.4e-06  Score=65.70  Aligned_cols=60  Identities=23%  Similarity=0.153  Sum_probs=48.2

Q ss_pred             CCcceEEEEecCCCccCCC------------------------------------------------------CCCCHHH
Q psy16481          3 CRANTICLFDVDGTLTQPR------------------------------------------------------QKAQNET   28 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~------------------------------------------------------~~i~~~~   28 (175)
                      .+.+|+|+|||||||++.+                                                      -.+.+..
T Consensus       105 ~~~~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~~~~~~~~l~pg~  184 (317)
T 4eze_A          105 LPANGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKGTPKAVLNAVCDRMTLSPGL  184 (317)
T ss_dssp             CCCSCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHHHHHHTCCBCTTH
T ss_pred             CCCCCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHHHHHhCCEECcCH
Confidence            4578999999999999965                                                      1244566


Q ss_pred             HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc
Q psy16481         29 LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL   63 (175)
Q Consensus        29 ~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~   63 (175)
                      .+. |++|+++ ++++++||.....+...++.+|+.
T Consensus       185 ~e~-L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~  219 (317)
T 4eze_A          185 LTI-LPVIKAKGFKTAIISGGLDIFTQRLKARYQLD  219 (317)
T ss_dssp             HHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred             HHH-HHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC
Confidence            777 9999999 999999999988887777766543

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=97.89  E-value=8.4e-07  Score=68.64  Aligned_cols=51  Identities=24%  Similarity=0.226  Sum_probs=39.1

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhC--CC-eEEEEEcCCCHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLK--PL-SHLAIVSGSDMNKVAEQL   57 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~--~~-i~~~iaTGR~~~~~~~~~   57 (175)
                      +|+|+|||||||++++..+.+...++ ++++.  .. ..+..++||+.......+
T Consensus        35 ik~iifDlDGTLlds~~~~~~~~~~~-~~~~g~~~~~~~~~~~~G~~~~~~~~~~   88 (275)
T 2qlt_A           35 INAALFDVDGTIIISQPAIAAFWRDF-GKDKPYFDAEHVIHISHGWRTYDAIAKF   88 (275)
T ss_dssp             ESEEEECCBTTTEECHHHHHHHHHHH-HTTCTTCCHHHHHHHCTTCCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHHHH-HHHcCCCCHHHHHHHhcCCCHHHHHHHH
Confidence            79999999999999988777777777 88775  22 445567899987664444

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=97.88  E-value=1.5e-06  Score=64.60  Aligned_cols=35  Identities=23%  Similarity=0.151  Sum_probs=29.4

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |.+..+|+|+|||||||++++..+.+...++ ++++
T Consensus         1 M~~~~~k~i~fD~DGTL~d~~~~~~~~~~~~-~~~~   35 (240)
T 3smv_A            1 MQLTDFKALTFDCYGTLIDWETGIVNALQPL-AKRT   35 (240)
T ss_dssp             CCGGGCSEEEECCBTTTBCHHHHHHHHTHHH-HHHH
T ss_pred             CCCccceEEEEeCCCcCcCCchhHHHHHHHH-HHHh
Confidence            7888899999999999999877777777777 7764

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=97.85  E-value=2.3e-06  Score=61.80  Aligned_cols=32  Identities=16%  Similarity=0.207  Sum_probs=27.1

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      .+|+|+|||||||++++..+++...++ ++++.
T Consensus         5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g   36 (190)
T 2fi1_A            5 KYHDYIWDLGGTLLDNYETSTAAFVET-LALYG   36 (190)
T ss_dssp             CCSEEEECTBTTTBCHHHHHHHHHHHH-HHHTT
T ss_pred             cccEEEEeCCCCcCCCHHHHHHHHHHH-HHHhC
Confidence            479999999999999877777777787 88764

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=97.83  E-value=1.6e-06  Score=63.47  Aligned_cols=18  Identities=17%  Similarity=0.425  Sum_probs=15.6

Q ss_pred             CcceEEEEecCCCccCCC
Q psy16481          4 RANTICLFDVDGTLTQPR   21 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~   21 (175)
                      ..+|+|+||+||||++++
T Consensus         5 ~~~k~viFDlDGTL~d~~   22 (206)
T 2b0c_A            5 EAKMLYIFDLGNVIVDID   22 (206)
T ss_dssp             -CCCEEEECCBTTTEEEE
T ss_pred             ccccEEEEcCCCeeecCc
Confidence            468999999999999876

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=97.81  E-value=3.9e-06  Score=62.15  Aligned_cols=48  Identities=25%  Similarity=0.313  Sum_probs=36.7

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-e---EEEEEcCCCHHHH
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-S---HLAIVSGSDMNKV   53 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i---~~~iaTGR~~~~~   53 (175)
                      .+|+|+|||||||+++...+.+...++ ++++... .   .+.-.+|++....
T Consensus         3 m~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~~~~   54 (226)
T 3mc1_A            3 LYNYVLFDLDGTLTDSAEGITKSVKYS-LNKFDIQVEDLSSLNKFVGPPLKTS   54 (226)
T ss_dssp             CCCEEEECSBTTTBCCHHHHHHHHHHH-HHTTTCCCSCGGGGGGGSSSCHHHH
T ss_pred             CCCEEEEeCCCccccCHHHHHHHHHHH-HHHcCCCCCCHHHHHHHhCcCHHHH
Confidence            489999999999999988888888888 8887543 2   2333567776654

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.81  E-value=1.1e-06  Score=63.71  Aligned_cols=50  Identities=12%  Similarity=0.131  Sum_probs=35.5

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC--C-eEEEEEcC-CCHHHHHHH
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP--L-SHLAIVSG-SDMNKVAEQ   56 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~--~-i~~~iaTG-R~~~~~~~~   56 (175)
                      +|+|+||+||||++++..+++...++ ++++.-  . ..+...+| ++...+...
T Consensus         4 ~k~i~fDlDGTL~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~~   57 (207)
T 2go7_A            4 KTAFIWDLDGTLLDSYEAILSGIEET-FAQFSIPYDKEKVREFIFKYSVQDLLVR   57 (207)
T ss_dssp             CCEEEECTBTTTEECHHHHHHHHHHH-HHHHTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred             ccEEEEeCCCcccccHHHHHHHHHHH-HHHcCCCCCHHHHHHHHccccHHHHHHH
Confidence            78999999999999988888888888 888732  2 22333456 655554433

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=97.81  E-value=9.8e-06  Score=59.25  Aligned_cols=34  Identities=15%  Similarity=0.115  Sum_probs=25.6

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+. |+.++++ ++++++||.+...+...+..+++
T Consensus        87 ~~~~-l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~  121 (219)
T 3kd3_A           87 IKEL-VQDLKNKGFEIWIFSGGLSESIQPFADYLNI  121 (219)
T ss_dssp             HHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHHTC
T ss_pred             HHHH-HHHHHHCCCeEEEEcCCcHHHHHHHHHHcCC
Confidence            4455 7778888 99999999988877766665543

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=97.80  E-value=3.8e-06  Score=63.81  Aligned_cols=54  Identities=19%  Similarity=0.178  Sum_probs=37.8

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-e---EEEEEcCCCHHHHHH
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-S---HLAIVSGSDMNKVAE   55 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i---~~~iaTGR~~~~~~~   55 (175)
                      |++..+|+|+||+||||+++...+.+...++ ++++... .   .+.-.+|+....+..
T Consensus        23 M~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~~~~~~   80 (259)
T 4eek_A           23 MPDAPFDAVLFDLDGVLVESEGIIAQVWQSV-LAERGLHLDLTEIAMYFTGQRFDGVLA   80 (259)
T ss_dssp             --CCCCSEEEEESBTTTEECHHHHHHHHHHH-HHHTTCCCCHHHHHHHTTTCCHHHHHH
T ss_pred             HHhcCCCEEEECCCCCcccCHHHHHHHHHHH-HHHhCCCCCHHHHHHHHhCCCHHHHHH
Confidence            6666899999999999999887777777787 8876543 1   122346777766543

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=97.79  E-value=5.3e-06  Score=61.93  Aligned_cols=54  Identities=17%  Similarity=0.217  Sum_probs=39.1

Q ss_pred             CCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCe---EEEEEcCCCHHHHHHH
Q psy16481          2 TCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLS---HLAIVSGSDMNKVAEQ   56 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i---~~~iaTGR~~~~~~~~   56 (175)
                      ...++|+|+|||||||++++..+.+...++ ++++....   .+.-..|++...+...
T Consensus        15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~~~~~   71 (237)
T 4ex6_A           15 PAAADRGVILDLDGTLADTPAAIATITAEV-LAAMGTAVSRGAILSTVGRPLPASLAG   71 (237)
T ss_dssp             --CCCEEEEECSBTTTBCCHHHHHHHHHHH-HHHTTCCCCHHHHHHHTTSCHHHHHHH
T ss_pred             CcccCCEEEEcCCCCCcCCHHHHHHHHHHH-HHHcCCCCCHHHHHHhcCccHHHHHHH
Confidence            346889999999999999988888888888 88886322   2334567777665443

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=97.79  E-value=4.4e-06  Score=61.88  Aligned_cols=32  Identities=22%  Similarity=0.315  Sum_probs=26.9

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      .+|+|+||+||||++++..+.+...++ ++++.
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g   34 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRL-LTEAG   34 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHH-HHHTT
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHH-HHHhC
Confidence            479999999999999987777777777 87763

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=97.77  E-value=1.2e-06  Score=65.15  Aligned_cols=35  Identities=20%  Similarity=0.131  Sum_probs=29.1

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SH   41 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~   41 (175)
                      +|+|+|||||||++++..++..+..+ ++.+++. +.
T Consensus         2 ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~~~~g~~   37 (234)
T 3u26_A            2 IRAVFFDSLGTLNSVEGAAKSHLKIM-EEVLGDYPLN   37 (234)
T ss_dssp             CCEEEECSTTTTBCHHHHHHHHHHHH-HHHCSSSSSC
T ss_pred             CcEEEEcCCCccccccchhHHHHHHH-HHHHhhcCCC
Confidence            69999999999999887777777777 8888876 54

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=97.76  E-value=5.4e-06  Score=62.36  Aligned_cols=35  Identities=20%  Similarity=0.198  Sum_probs=29.0

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      |..+|+|+|||||||++++..+.+...++ ++++.-
T Consensus        21 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~   55 (243)
T 3qxg_A           21 RKKLKAVLFDMDGVLFNSMPYHSEAWHQV-MKTHGL   55 (243)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHHH-HHHTTC
T ss_pred             cccCCEEEEcCCCCCCCCHHHHHHHHHHH-HHHhCC
Confidence            45689999999999999988888888888 887654

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=97.76  E-value=4.8e-06  Score=61.20  Aligned_cols=47  Identities=15%  Similarity=0.162  Sum_probs=37.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC----eEEEEEcCCCHHHH
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL----SHLAIVSGSDMNKV   53 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~----i~~~iaTGR~~~~~   53 (175)
                      +|+|+|||||||++++..+++...++ ++++...    ..+..++||+....
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~~~~   52 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKAL-AEEIGINGVDRQFNEQLKGVSREDS   52 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHH-HHHTTCCCCSHHHHTTTTTCCHHHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHH-HHHcCCCCCCHHHHHHhCCCCHHHH
Confidence            68999999999999888888888888 8887543    23345789987664

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=97.74  E-value=3e-05  Score=57.15  Aligned_cols=42  Identities=19%  Similarity=0.213  Sum_probs=30.3

Q ss_pred             HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         29 LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        29 ~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      .+. ++.|+++ ++++++|+.+...+...+..+++...++.+++
T Consensus        90 ~~~-l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~  132 (216)
T 3kbb_A           90 REA-LEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVF  132 (216)
T ss_dssp             HHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEEC
T ss_pred             HHH-HHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcccccccc
Confidence            445 7777777 99999999998887777766665555555543

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=97.71  E-value=1.3e-05  Score=58.58  Aligned_cols=32  Identities=22%  Similarity=0.400  Sum_probs=21.5

Q ss_pred             eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         40 SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        40 i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ++++++|+++...+...++.+++...++.+++
T Consensus        89 ~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~  120 (201)
T 2w43_A           89 AEVYALSNGSINEVKQHLERNGLLRYFKGIFS  120 (201)
T ss_dssp             SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEe
Confidence            67899999988777776766554433444443

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=97.71  E-value=1.1e-05  Score=62.64  Aligned_cols=58  Identities=7%  Similarity=0.116  Sum_probs=43.0

Q ss_pred             CcceEEEEecCCCccCCC----------CCCCH----------------HHHHHHHHhhCCC-eEEEEEcCCCHH----H
Q psy16481          4 RANTICLFDVDGTLTQPR----------QKAQN----------------ETLDFLLKKLKPL-SHLAIVSGSDMN----K   52 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~----------~~i~~----------------~~~~~~l~~l~~~-i~~~iaTGR~~~----~   52 (175)
                      .++.+|+||+||||++..          +..++                ...+. |+.|+++ +.++++|||+-.    .
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~el-l~~L~~~G~ki~ivTgR~~~~~r~~  134 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEF-NNYVNSHNGKVFYVTNRKDSTEKSG  134 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHH-HHHHHHTTEEEEEEEEEETTTTHHH
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHH-HHHHHHCCCeEEEEeCCCccchHHH
Confidence            356799999999999863          23443                45667 8999999 999999999764    4


Q ss_pred             HHHHhcCCCc
Q psy16481         53 VAEQLGGEKV   62 (175)
Q Consensus        53 ~~~~~~~~~~   62 (175)
                      ....+..+|+
T Consensus       135 T~~~L~~lGi  144 (262)
T 3ocu_A          135 TIDDMKRLGF  144 (262)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHcCc
Confidence            4555666554

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=97.70  E-value=5.7e-06  Score=61.50  Aligned_cols=35  Identities=20%  Similarity=0.260  Sum_probs=26.5

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      |+| .+|+|+||+||||++++..+.+...++ ++++.
T Consensus         1 M~m-~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g   35 (240)
T 3qnm_A            1 MSL-KYKNLFFDLDDTIWAFSRNARDTFEEV-YQKYS   35 (240)
T ss_dssp             --C-CCSEEEECCBTTTBCHHHHHHHHHHHH-HHHTT
T ss_pred             CCC-CceEEEEcCCCCCcCchhhHHHHHHHH-HHHcC
Confidence            554 489999999999999887776676777 77763

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=97.68  E-value=6.4e-06  Score=62.22  Aligned_cols=49  Identities=16%  Similarity=0.197  Sum_probs=35.7

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC---eEEEEEcCCCHHHH
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL---SHLAIVSGSDMNKV   53 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~---i~~~iaTGR~~~~~   53 (175)
                      ..+|+|+||+||||+++...+.+...++ ++++...   -.+.-..|++....
T Consensus        28 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~~~~   79 (250)
T 3l5k_A           28 QPVTHLIFDMDGLLLDTERLYSVVFQEI-CNRYDKKYSWDVKSLVMGKKALEA   79 (250)
T ss_dssp             CCCSEEEEETBTTTBCHHHHHHHHHHHH-HHHTTCCCCHHHHHHHTTCCHHHH
T ss_pred             cCCcEEEEcCCCCcCCCHHHHHHHHHHH-HHHhCCCCCHHHHHHhcCCCHHHH
Confidence            5689999999999999887788888888 8887543   11223356666554

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=97.67  E-value=2.2e-05  Score=59.72  Aligned_cols=33  Identities=15%  Similarity=0.122  Sum_probs=23.4

Q ss_pred             CCcceEEEEecCCCccCCCCCC-CHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKA-QNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i-~~~~~~~~l~~l   36 (175)
                      +..+|+|+||+||||++++... .....++ ++++
T Consensus        11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~-~~~~   44 (277)
T 3iru_A           11 AGPVEALILDWAGTTIDFGSLAPVYAFMEL-FKQE   44 (277)
T ss_dssp             CCCCCEEEEESBTTTBSTTCCHHHHHHHHH-HHTT
T ss_pred             hccCcEEEEcCCCCcccCCcccHHHHHHHH-HHHh
Confidence            3468999999999999987654 3444444 5543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=97.66  E-value=1.9e-05  Score=57.85  Aligned_cols=15  Identities=33%  Similarity=0.488  Sum_probs=13.7

Q ss_pred             ceEEEEecCCCccCC
Q psy16481          6 NTICLFDVDGTLTQP   20 (175)
Q Consensus         6 ~kli~~DlDGTLl~~   20 (175)
                      .|+|+|||||||+++
T Consensus         2 ~k~viFDlDGTL~Ds   16 (193)
T 2i7d_A            2 SVRVLVDMDGVLADF   16 (193)
T ss_dssp             CEEEEECSBTTTBCH
T ss_pred             CcEEEEECCCcCccc
Confidence            589999999999986

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=97.66  E-value=7.7e-06  Score=60.78  Aligned_cols=33  Identities=18%  Similarity=0.189  Sum_probs=27.7

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      ..+|+|+||+||||+++...+.+...++ ++++.
T Consensus         5 m~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g   37 (238)
T 3ed5_A            5 KRYRTLLFDVDDTILDFQAAEALALRLL-FEDQN   37 (238)
T ss_dssp             CCCCEEEECCBTTTBCHHHHHHHHHHHH-HHHTT
T ss_pred             ccCCEEEEcCcCcCcCCchhHHHHHHHH-HHHcC
Confidence            4689999999999999887787777777 87754

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=97.65  E-value=8.6e-06  Score=63.27  Aligned_cols=56  Identities=13%  Similarity=0.175  Sum_probs=42.3

Q ss_pred             ceEEEEecCCCccCCC----------CCCC----------------HHHHHHHHHhhCCC-eEEEEEcCCCHH----HHH
Q psy16481          6 NTICLFDVDGTLTQPR----------QKAQ----------------NETLDFLLKKLKPL-SHLAIVSGSDMN----KVA   54 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~----------~~i~----------------~~~~~~~l~~l~~~-i~~~iaTGR~~~----~~~   54 (175)
                      +++|+||+|||||+..          +..+                |...+. |+.|+++ +.++++|||+-.    ...
T Consensus        58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~el-l~~L~~~G~~i~ivTgR~~~~~r~~T~  136 (260)
T 3pct_A           58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEF-SNYVNANGGTMFFVSNRRDDVEKAGTV  136 (260)
T ss_dssp             CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHH-HHHHHHTTCEEEEEEEEETTTSHHHHH
T ss_pred             CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHH-HHHHHHCCCeEEEEeCCCccccHHHHH
Confidence            4699999999999863          2333                356777 9999999 999999999754    445


Q ss_pred             HHhcCCCc
Q psy16481         55 EQLGGEKV   62 (175)
Q Consensus        55 ~~~~~~~~   62 (175)
                      ..+..+|+
T Consensus       137 ~~L~~lGi  144 (260)
T 3pct_A          137 DDMKRLGF  144 (260)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHcCc
Confidence            56666554

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=97.63  E-value=0.00012  Score=53.50  Aligned_cols=17  Identities=24%  Similarity=0.335  Sum_probs=14.9

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      .+|+|+|||||||++++
T Consensus         4 m~k~iiFDlDGTL~d~~   20 (211)
T 2i6x_A            4 MIRNIVFDLGGVLIHLN   20 (211)
T ss_dssp             CCSEEEECSBTTTEEEC
T ss_pred             cceEEEEeCCCeeEecc
Confidence            47999999999999864

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=97.63  E-value=2.7e-05  Score=57.81  Aligned_cols=35  Identities=11%  Similarity=0.168  Sum_probs=27.0

Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ...+. |+.|+++ ++++++||++...+...+..+++
T Consensus        90 g~~~~-l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl  125 (225)
T 1nnl_A           90 GIREL-VSRLQERNVQVFLISGGFRSIVEHVASKLNI  125 (225)
T ss_dssp             THHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             cHHHH-HHHHHHCCCcEEEEeCChHHHHHHHHHHcCC
Confidence            34456 7888888 99999999998888777776654

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=97.57  E-value=1.1e-05  Score=60.74  Aligned_cols=31  Identities=29%  Similarity=0.295  Sum_probs=27.2

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      .+|+|+|||||||+++...+++...++ ++++
T Consensus        21 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~   51 (254)
T 3umc_A           21 GMRAILFDVFGTLVDWRSSLIEQFQAL-EREL   51 (254)
T ss_dssp             SCCEEEECCBTTTEEHHHHHHHHHHHH-HHHS
T ss_pred             CCcEEEEeCCCccEecCccHHHHHHHH-HHHh
Confidence            479999999999999887888888888 8877

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=97.56  E-value=1.7e-05  Score=57.65  Aligned_cols=33  Identities=21%  Similarity=0.289  Sum_probs=27.8

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      .+|+|+||+||||+++...+.+...++ ++++..
T Consensus         4 m~k~i~fDlDGTL~~~~~~~~~~~~~~-~~~~g~   36 (214)
T 3e58_A            4 MVEAIIFDMDGVLFDTEKYYYDRRASF-LGQKGI   36 (214)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHH-HHHTTC
T ss_pred             cccEEEEcCCCCccccHHHHHHHHHHH-HHHcCC
Confidence            479999999999999988777777787 887654

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=97.54  E-value=0.00012  Score=60.18  Aligned_cols=61  Identities=25%  Similarity=0.266  Sum_probs=47.2

Q ss_pred             CCCCcceEEEEecCCCccCCCC------------------------------------------------------CCCH
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQ------------------------------------------------------KAQN   26 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~------------------------------------------------------~i~~   26 (175)
                      |..+.+|+|+|||||||++.+.                                                      .+.+
T Consensus       180 ~~~~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p  259 (415)
T 3p96_A          180 LERRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMP  259 (415)
T ss_dssp             TTTTCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHHCCBCT
T ss_pred             ccccCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHhCccCc
Confidence            3456789999999999999541                                                      1234


Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ...+. |+.|+++ ++++++||.....+...++.+|+
T Consensus       260 g~~e~-l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl  295 (415)
T 3p96_A          260 GARTT-LRTLRRLGYACGVVSGGFRRIIEPLAEELML  295 (415)
T ss_dssp             THHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred             cHHHH-HHHHHHCCCEEEEEcCCcHHHHHHHHHHcCc
Confidence            45566 8889888 99999999988888777777664

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=97.54  E-value=1.2e-05  Score=59.74  Aligned_cols=33  Identities=15%  Similarity=0.223  Sum_probs=26.9

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      ++|+|+|||||||+++...+.+...++ ++++..
T Consensus         1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~-~~~~g~   33 (233)
T 3nas_A            1 SLKAVIFDLDGVITDTAEYHFLAWKHI-AEQIDI   33 (233)
T ss_dssp             -CCEEEECSBTTTBCHHHHHHHHHHHH-HHHTTC
T ss_pred             CCcEEEECCCCCcCCCHHHHHHHHHHH-HHHcCC
Confidence            478999999999999887777777777 777653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=97.52  E-value=1.7e-05  Score=58.64  Aligned_cols=32  Identities=31%  Similarity=0.369  Sum_probs=25.4

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      ++|+|+|||||||+++...+.+...++ ++++.
T Consensus         3 ~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~g   34 (210)
T 2ah5_A            3 SITAIFFDLDGTLVDSSIGIHNAFTYT-FKELG   34 (210)
T ss_dssp             TCCEEEECSBTTTEECHHHHHHHHHHH-HHHHT
T ss_pred             CCCEEEEcCCCcCccCHHHHHHHHHHH-HHHcC
Confidence            478999999999999876666666666 77763

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=97.48  E-value=2e-05  Score=59.04  Aligned_cols=32  Identities=34%  Similarity=0.498  Sum_probs=27.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      +|+|+||+||||++++..+.+...++ ++++..
T Consensus        29 ik~iifDlDGTL~d~~~~~~~~~~~~-~~~~g~   60 (240)
T 3sd7_A           29 YEIVLFDLDGTLTDPKEGITKSIQYS-LNSFGI   60 (240)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHH-HHHTTC
T ss_pred             ccEEEEecCCcCccCHHHHHHHHHHH-HHHcCC
Confidence            79999999999999887777787787 887654

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=97.43  E-value=3.2e-05  Score=58.64  Aligned_cols=34  Identities=18%  Similarity=0.271  Sum_probs=22.1

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |.|+ +|.|+||+||||+++.........++ ++++
T Consensus         1 M~Mk-iKaViFDlDGTL~Ds~~~~~~a~~~~-~~~~   34 (243)
T 4g9b_A            1 MVMK-LQGVIFDLDGVITDTAHLHFQAWQQI-AAEI   34 (243)
T ss_dssp             -CCC-CCEEEECSBTTTBCCHHHHHHHHHHH-HHHT
T ss_pred             CCcc-CcEEEEcCCCcccCCHHHHHHHHHHH-HHHc
Confidence            7775 89999999999998654332233333 5544

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=97.42  E-value=2.6e-05  Score=58.48  Aligned_cols=33  Identities=18%  Similarity=0.347  Sum_probs=22.6

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      ++.+|+|+|||||||+++...+.....++ ++++
T Consensus         8 ~~~~k~viFDlDGTL~ds~~~~~~~~~~~-~~~~   40 (231)
T 2p11_A            8 TPHDIVFLFDCDNTLLDNDHVLADLRAHM-MREF   40 (231)
T ss_dssp             -CCSEEEEECCBTTTBCHHHHHHHHHHHH-HHHH
T ss_pred             CCCCeEEEEcCCCCCEecHHHHHHHHHHH-HHHc
Confidence            36789999999999999765444444444 4443

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=97.40  E-value=2.6e-05  Score=57.13  Aligned_cols=31  Identities=26%  Similarity=0.380  Sum_probs=25.7

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      +|+|+||+||||++++..+.+...++ ++++.
T Consensus         4 ~k~iifDlDGTL~d~~~~~~~~~~~~-~~~~g   34 (209)
T 2hdo_A            4 YQALMFDIDGTLTNSQPAYTTVMREV-LATYG   34 (209)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHH-HHTTT
T ss_pred             ccEEEEcCCCCCcCCHHHHHHHHHHH-HHHhC
Confidence            68999999999999987777777777 77653

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=97.38  E-value=6.7e-05  Score=55.73  Aligned_cols=57  Identities=14%  Similarity=0.132  Sum_probs=44.8

Q ss_pred             CcceEEEEecCCCccCCCC-----------------------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ-----------------------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      .+++.+++||||||+.+..                       ..-|...+. |+++.+.+.++|+|..+...+...++.+
T Consensus        26 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~ef-L~~l~~~~~i~I~Tss~~~~a~~vl~~l  104 (195)
T 2hhl_A           26 YGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEF-LQRMGQLFECVLFTASLAKYADPVADLL  104 (195)
T ss_dssp             TTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHH-HHHHHHHSEEEEECSSCHHHHHHHHHHH
T ss_pred             CCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHH-HHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence            4689999999999998642                       124667777 9999877999999999988877666654


Q ss_pred             C
Q psy16481         61 K   61 (175)
Q Consensus        61 ~   61 (175)
                      +
T Consensus       105 d  105 (195)
T 2hhl_A          105 D  105 (195)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=97.33  E-value=3.1e-05  Score=58.11  Aligned_cols=31  Identities=19%  Similarity=0.338  Sum_probs=25.9

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      +|+|+|||||||+++...+.+...++ ++++.
T Consensus         2 ~k~iiFDlDGTL~d~~~~~~~~~~~~-~~~~~   32 (241)
T 2hoq_A            2 VKVIFFDLDDTLVDTSKLAEIARKNA-IENMI   32 (241)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHH-HHHHH
T ss_pred             ccEEEEcCCCCCCCChhhHHHHHHHH-HHHHH
Confidence            68999999999999887777777777 77764

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=97.33  E-value=0.00032  Score=51.19  Aligned_cols=35  Identities=11%  Similarity=0.089  Sum_probs=24.4

Q ss_pred             HHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcc
Q psy16481         28 TLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVL   63 (175)
Q Consensus        28 ~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~   63 (175)
                      ..+. |+.|+++++++++|+.+...+...++.+++.
T Consensus        74 ~~~~-l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~  108 (206)
T 1rku_A           74 AVEF-VDWLRERFQVVILSDTFYEFSQPLMRQLGFP  108 (206)
T ss_dssp             HHHH-HHHHHTTSEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             HHHH-HHHHHhcCcEEEEECChHHHHHHHHHHcCCc
Confidence            3444 5666555789999999888777777766543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=97.25  E-value=5.3e-05  Score=56.99  Aligned_cols=30  Identities=17%  Similarity=0.275  Sum_probs=25.3

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|+|+|||||||+++...+.....++ ++++
T Consensus         4 ~k~viFDlDGTL~ds~~~~~~~~~~~-~~~~   33 (240)
T 2hi0_A            4 YKAAIFDMDGTILDTSADLTSALNYA-FEQT   33 (240)
T ss_dssp             CSEEEECSBTTTEECHHHHHHHHHHH-HHHT
T ss_pred             ccEEEEecCCCCccCHHHHHHHHHHH-HHHc
Confidence            78999999999999887777777777 7765

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=97.23  E-value=7.1e-05  Score=53.98  Aligned_cols=21  Identities=29%  Similarity=0.313  Sum_probs=16.8

Q ss_pred             CCCCcceEEE-EecCCCccCCC
Q psy16481          1 MTCRANTICL-FDVDGTLTQPR   21 (175)
Q Consensus         1 ~~~~~~kli~-~DlDGTLl~~~   21 (175)
                      |.+++.|+++ |||||||++++
T Consensus         3 m~~~~mk~ivifDlDGTL~d~~   24 (201)
T 4ap9_A            3 MDPQFMKKVAVIDIEGTLTDFE   24 (201)
T ss_dssp             EECGGGSCEEEEECBTTTBCCC
T ss_pred             CChHhcceeEEecccCCCcchH
Confidence            5566677777 99999999875

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=97.21  E-value=0.00019  Score=52.05  Aligned_cols=31  Identities=13%  Similarity=0.269  Sum_probs=23.0

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhC
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLK   37 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~   37 (175)
                      ++|+|+|||||||++++. ......++ ++++.
T Consensus         3 ~~k~viFDlDGTL~d~~~-~~~~~~~~-~~~~g   33 (200)
T 3cnh_A            3 TIKALFWDIGGVLLTNGW-DREQRADV-AQRFG   33 (200)
T ss_dssp             CCCEEEECCBTTTBCCSS-CHHHHHHH-HHHHT
T ss_pred             CceEEEEeCCCeeECCCc-chHHHHHH-HHHcC
Confidence            378999999999999764 44455555 66664

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=97.13  E-value=9.1e-05  Score=55.93  Aligned_cols=32  Identities=25%  Similarity=0.255  Sum_probs=24.3

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      ..+|+|+||+||||+++...+.....++ ++++
T Consensus        21 ~~~k~iiFDlDGTL~d~~~~~~~~~~~~-~~~~   52 (243)
T 2hsz_A           21 TQFKLIGFDLDGTLVNSLPDLALSINSA-LKDV   52 (243)
T ss_dssp             SSCSEEEECSBTTTEECHHHHHHHHHHH-HHHT
T ss_pred             ccCCEEEEcCCCcCCCCHHHHHHHHHHH-HHHc
Confidence            4679999999999999876555555555 6665

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=97.10  E-value=7e-05  Score=57.46  Aligned_cols=35  Identities=26%  Similarity=0.376  Sum_probs=25.1

Q ss_pred             CCCCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          1 MTCRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |-...+|+|+|||||||+++...+.....++ ++++
T Consensus        13 ~~~~~~k~viFDlDGTLvds~~~~~~a~~~~-~~~~   47 (260)
T 2gfh_A           13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEV-IKLL   47 (260)
T ss_dssp             EECCCCCEEEECCBTTTBCHHHHHHHHHHHH-HHHH
T ss_pred             cccccceEEEEcCCCCCCCCHHHHHHHHHHH-HHHH
Confidence            4456789999999999999765454444455 5543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=97.08  E-value=0.00024  Score=52.04  Aligned_cols=57  Identities=12%  Similarity=0.116  Sum_probs=44.1

Q ss_pred             CcceEEEEecCCCccCCCC-----------------------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ-----------------------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      .+++.+++||||||+.+..                       ..-|...+. |+++.+.+.++|+|..+...+...++.+
T Consensus        13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~ef-L~~l~~~~~i~I~T~~~~~~a~~vl~~l   91 (181)
T 2ght_A           13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEF-LQRMGELFECVLFTASLAKYADPVADLL   91 (181)
T ss_dssp             TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHH-HHHHHHHSEEEEECSSCHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHH-HHHHHhCCCEEEEcCCCHHHHHHHHHHH
Confidence            4679999999999998632                       134566777 9998877999999999988776666554


Q ss_pred             C
Q psy16481         61 K   61 (175)
Q Consensus        61 ~   61 (175)
                      +
T Consensus        92 d   92 (181)
T 2ght_A           92 D   92 (181)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=97.00  E-value=0.00021  Score=54.56  Aligned_cols=32  Identities=16%  Similarity=0.082  Sum_probs=24.8

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCC
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKP   38 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~   38 (175)
                      +|+|+|||||||+++...+.+...++ ++++.-
T Consensus         1 ik~iiFDlDGTL~d~~~~~~~~~~~~-~~~~g~   32 (263)
T 3k1z_A            1 MRLLTWDVKDTLLRLRHPLGEAYATK-ARAHGL   32 (263)
T ss_dssp             CCEEEECCBTTTEEESSCHHHHHHHH-HHHTTC
T ss_pred             CcEEEEcCCCceeCCCCCHHHHHHHH-HHHhCC
Confidence            48999999999999877776666666 666543

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=96.96  E-value=0.00013  Score=54.19  Aligned_cols=30  Identities=33%  Similarity=0.432  Sum_probs=24.1

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|+|+||+||||+++...+.....++ ++++
T Consensus         3 ~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~   32 (222)
T 2nyv_A            3 LRVILFDLDGTLIDSAKDIALALEKT-LKEL   32 (222)
T ss_dssp             ECEEEECTBTTTEECHHHHHHHHHHH-HHHT
T ss_pred             CCEEEECCCCcCCCCHHHHHHHHHHH-HHHc
Confidence            78999999999999876666666666 7765

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=96.91  E-value=0.00028  Score=52.29  Aligned_cols=31  Identities=19%  Similarity=0.144  Sum_probs=23.5

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      ++|+|+||+||||+++...+.....++ ++++
T Consensus         2 ~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~   32 (220)
T 2zg6_A            2 KYKAVLVDFGNTLVGFKPVFYEKVYQV-LKDN   32 (220)
T ss_dssp             CCCEEEECSBTTTEEEEETTHHHHHHH-HHHT
T ss_pred             CceEEEEcCCCceecccccHHHHHHHH-HHHh
Confidence            478999999999999876665555555 6654

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=96.78  E-value=0.00059  Score=56.37  Aligned_cols=22  Identities=18%  Similarity=0.128  Sum_probs=17.9

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCC
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGS   48 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR   48 (175)
                      +...+. |++|+++ ++++++|+.
T Consensus       103 ~~~~~~-L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A          103 RPMLQA-ALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             HHHHHH-HHHHHHTTCEEEEEECC
T ss_pred             hhHHHH-HHHHHHCCCEEEEEeCC
Confidence            445566 8889988 999999997

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=96.66  E-value=0.00037  Score=52.87  Aligned_cols=16  Identities=31%  Similarity=0.600  Sum_probs=14.4

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|.|+||+||||+++.
T Consensus        26 IKaViFDlDGTLvDs~   41 (250)
T 4gib_A           26 IEAFIFDLDGVITDTA   41 (250)
T ss_dssp             CCEEEECTBTTTBCCH
T ss_pred             hheeeecCCCcccCCH
Confidence            6899999999999864

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=96.65  E-value=0.00019  Score=52.65  Aligned_cols=20  Identities=25%  Similarity=0.248  Sum_probs=16.5

Q ss_pred             cceEEEEecCCCccCCCCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQKA   24 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i   24 (175)
                      ++|.|+|||||||+++...+
T Consensus         3 ~~k~viFDlDGTL~Ds~~~~   22 (197)
T 1q92_A            3 RALRVLVDMDGVLADFEGGF   22 (197)
T ss_dssp             CCEEEEECSBTTTBCHHHHH
T ss_pred             CceEEEEeCCCCCccCcHHH
Confidence            56899999999999976433

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=96.61  E-value=0.0026  Score=49.48  Aligned_cols=45  Identities=24%  Similarity=0.441  Sum_probs=38.7

Q ss_pred             ceEEEEecCCCccCCCCCC------------CHHHHHHHHHhhCCC-eEEEEEcCCCHH
Q psy16481          6 NTICLFDVDGTLTQPRQKA------------QNETLDFLLKKLKPL-SHLAIVSGSDMN   51 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i------------~~~~~~~~l~~l~~~-i~~~iaTGR~~~   51 (175)
                      .+.+++|+|||+....+.+            -+...+. |+.|+++ +++++||||+..
T Consensus       159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~-L~~L~~~g~~~~v~T~k~~~  216 (301)
T 1ltq_A          159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVEL-SKMYALMGYQIVVVSGRESG  216 (301)
T ss_dssp             CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHH-HHHHHHTTCEEEEEECSCCC
T ss_pred             cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHH-HHHHHHCCCeEEEEeCCCcc
Confidence            4789999999998876655            5888998 9999999 999999999853

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=96.34  E-value=0.0013  Score=50.56  Aligned_cols=17  Identities=24%  Similarity=0.444  Sum_probs=15.2

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      ++|.|.|||||||+++.
T Consensus        30 ~ikaviFDlDGTLvDs~   46 (253)
T 2g80_A           30 NYSTYLLDIEGTVCPIS   46 (253)
T ss_dssp             CCSEEEECCBTTTBCTH
T ss_pred             CCcEEEEcCCCCccccc
Confidence            47999999999999974

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=96.21  E-value=0.0013  Score=47.31  Aligned_cols=16  Identities=19%  Similarity=0.214  Sum_probs=14.0

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|.|+|||||||+++.
T Consensus         4 ~~~viFD~DGtL~Ds~   19 (180)
T 3bwv_A            4 RQRIAIDMDEVLADTL   19 (180)
T ss_dssp             CCEEEEETBTTTBCHH
T ss_pred             ccEEEEeCCCcccccH
Confidence            4899999999999964

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=95.98  E-value=0.0031  Score=47.20  Aligned_cols=29  Identities=17%  Similarity=0.106  Sum_probs=20.8

Q ss_pred             HHHHHHhhCCC-eEEEEEcCCCHHHHHHHhc
Q psy16481         29 LDFLLKKLKPL-SHLAIVSGSDMNKVAEQLG   58 (175)
Q Consensus        29 ~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~   58 (175)
                      .+. |++|+++ ++++++|+.+...+...++
T Consensus        83 ~~~-l~~L~~~g~~~~ivS~~~~~~~~~~l~  112 (236)
T 2fea_A           83 REF-VAFINEHEIPFYVISGGMDFFVYPLLE  112 (236)
T ss_dssp             HHH-HHHHHHHTCCEEEEEEEEHHHHHHHHT
T ss_pred             HHH-HHHHHhCCCeEEEEeCCcHHHHHHHHh
Confidence            345 6677766 8888888887776666665

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=95.93  E-value=0.0074  Score=45.02  Aligned_cols=56  Identities=11%  Similarity=0.042  Sum_probs=43.6

Q ss_pred             CcceEEEEecCCCccCCCC--------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          4 RANTICLFDVDGTLTQPRQ--------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~--------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      ..++.+++|||+||+.+..        ..=|...+. |+.+.+...++|.|.....-+...++.+
T Consensus        32 ~~~~tLVLDLDeTLvh~~~~~~~~~~v~~RPgl~eF-L~~l~~~yeivI~Tas~~~ya~~vl~~L   95 (204)
T 3qle_A           32 QRPLTLVITLEDFLVHSEWSQKHGWRTAKRPGADYF-LGYLSQYYEIVLFSSNYMMYSDKIAEKL   95 (204)
T ss_dssp             CCSEEEEEECBTTTEEEEEETTTEEEEEECTTHHHH-HHHHTTTEEEEEECSSCHHHHHHHHHHT
T ss_pred             CCCeEEEEeccccEEeeeccccCceeEEeCCCHHHH-HHHHHhCCEEEEEcCCcHHHHHHHHHHh
Confidence            3568999999999998632        345677787 9999955999999998888776666554

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=95.79  E-value=0.0036  Score=47.91  Aligned_cols=17  Identities=35%  Similarity=0.505  Sum_probs=15.1

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      .+|.|+|||||||+++.
T Consensus         9 ~ikaviFDlDGTL~ds~   25 (261)
T 1yns_A            9 EVTVILLDIEGTTTPIA   25 (261)
T ss_dssp             TCCEEEECCBTTTBCHH
T ss_pred             CCCEEEEecCCCccchh
Confidence            58999999999999853

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=95.72  E-value=0.0048  Score=47.82  Aligned_cols=20  Identities=35%  Similarity=0.521  Sum_probs=17.6

Q ss_pred             cceEEEEecCCCccCCCCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQKA   24 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i   24 (175)
                      +++.|+||+||||+++...+
T Consensus        31 ~i~~viFD~dGTL~ds~~~~   50 (287)
T 3a1c_A           31 KVTAVIFDKTGTLTKGKPEV   50 (287)
T ss_dssp             HCCEEEEECCCCCBCSCCEE
T ss_pred             cCCEEEEeCCCCCcCCCEEE
Confidence            57899999999999988755

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=95.42  E-value=0.0073  Score=46.75  Aligned_cols=57  Identities=11%  Similarity=0.208  Sum_probs=47.2

Q ss_pred             cceEEEEecCCCccC---CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQ---PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~---~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..++|++|+||+++.   ....+-|...++ |+.|+++ ++++++||++...+...++.+++
T Consensus       142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~-l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl  202 (287)
T 3a1c_A          142 AKTAVIVARNGRVEGIIAVSDTLKESAKPA-VQELKRMGIKVGMITGDNWRSAEAISRELNL  202 (287)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCTTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             CCeEEEEEECCEEEEEEEeccccchhHHHH-HHHHHHCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence            357899999999875   234678899999 9999998 99999999999888777766543

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=95.34  E-value=0.019  Score=45.73  Aligned_cols=56  Identities=20%  Similarity=0.212  Sum_probs=42.9

Q ss_pred             CcceEEEEecCCCccCCCCC-------CCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCC
Q psy16481          4 RANTICLFDVDGTLTQPRQK-------AQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~-------i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      ..++++++||||||+.+...       .=|...+. |+.+.+.+.++|.|.....-+...+..+
T Consensus       138 ~~k~tLVLDLDeTLvh~~~~~~~~~~~~RP~l~eF-L~~l~~~yeivIfTas~~~ya~~vld~L  200 (320)
T 3shq_A          138 EGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEF-LTSAYEDYDIVIWSATSMRWIEEKMRLL  200 (320)
T ss_dssp             TTCEEEEECCBTTTBCSSSCCSSHHHHBCTTHHHH-HHHHHHHEEEEEECSSCHHHHHHHHHHT
T ss_pred             CCCcEEEEeccccEEcccccCCCcceEeCCCHHHH-HHHHHhCCEEEEEcCCcHHHHHHHHHHh
Confidence            36799999999999997631       34455566 9998855999999999888777666544

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=94.84  E-value=0.017  Score=45.60  Aligned_cols=62  Identities=10%  Similarity=0.022  Sum_probs=44.3

Q ss_pred             CCCCCHHHHHHHHHhhC-----------CC-eEEEEEcCCCHHHHHHHhcCCCccc---ccceEEecCCceeee-CCeE
Q psy16481         21 RQKAQNETLDFLLKKLK-----------PL-SHLAIVSGSDMNKVAEQLGGEKVLE---QFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus        21 ~~~i~~~~~~~~l~~l~-----------~~-i~~~iaTGR~~~~~~~~~~~~~~~~---~~~~~i~~NGa~i~~-~~~~   83 (175)
                      ...++++...+ +.++.           .+ +.|++||||+...+......+++..   ...+.++.||+++++ +|..
T Consensus        41 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~~~~~~~~~i~~~~~viFD~DgTL  118 (335)
T 3n28_A           41 GHYLTPAQFED-MDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDYARIQDVPDLTKPGLIVLDMDSTA  118 (335)
T ss_dssp             ESCCCHHHHHH-HHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEEEECTTCCCTTSCCEEEECSSCHH
T ss_pred             CCCCCHHHHHH-HHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCEEEccCcccccCCCEEEEcCCCCC
Confidence            34688999998 76665           24 8999999999999988877665421   112466778888886 4543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=94.61  E-value=0.026  Score=43.84  Aligned_cols=39  Identities=18%  Similarity=0.130  Sum_probs=30.1

Q ss_pred             CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         23 KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        23 ~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .+.+...++ ++.++++ +.++++||-....+...+..+++
T Consensus       141 ~l~~g~~e~-i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~  180 (297)
T 4fe3_A          141 MLKEGYENF-FGKLQQHGIPVFIFSAGIGDVLEEVIRQAGV  180 (297)
T ss_dssp             CBCBTHHHH-HHHHHHTTCCEEEEEEEEHHHHHHHHHHTTC
T ss_pred             CCCCcHHHH-HHHHHHcCCeEEEEeCCcHHHHHHHHHHcCC
Confidence            345566777 8888888 99999999888777777766654

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=94.33  E-value=0.045  Score=44.45  Aligned_cols=54  Identities=19%  Similarity=0.190  Sum_probs=38.9

Q ss_pred             CcceEEEEecCCCccCCCCC----------------------------------------CCHHHHHHHHHhhCCCeEEE
Q psy16481          4 RANTICLFDVDGTLTQPRQK----------------------------------------AQNETLDFLLKKLKPLSHLA   43 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~----------------------------------------i~~~~~~~~l~~l~~~i~~~   43 (175)
                      .+++.+++||||||+.+...                                        .=|...+. |+.+.+.+.++
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eF-L~~l~~~yeiv   94 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQF-LQKISELYELH   94 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHH-HHHHHTTEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHH-HHHHhcCcEEE
Confidence            46789999999999997310                                        02445677 99998558899


Q ss_pred             EEcCCCHHHHHHHhc
Q psy16481         44 IVSGSDMNKVAEQLG   58 (175)
Q Consensus        44 iaTGR~~~~~~~~~~   58 (175)
                      |.|.....-+...+.
T Consensus        95 I~Tas~~~yA~~vl~  109 (372)
T 3ef0_A           95 IYTMGTKAYAKEVAK  109 (372)
T ss_dssp             EECSSCHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHH
Confidence            998877765544443

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=93.72  E-value=0.027  Score=44.43  Aligned_cols=35  Identities=17%  Similarity=0.076  Sum_probs=25.6

Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ...+. |+.|+++ ++++++||.....+...++.+++
T Consensus       182 g~~~~-l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl  217 (335)
T 3n28_A          182 ELPEL-VATLHAFGWKVAIASGGFTYFSDYLKEQLSL  217 (335)
T ss_dssp             THHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHHTC
T ss_pred             CHHHH-HHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC
Confidence            34455 7778888 99999999887777666655544

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=93.70  E-value=0.037  Score=44.12  Aligned_cols=35  Identities=11%  Similarity=0.072  Sum_probs=28.7

Q ss_pred             CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcC
Q psy16481         24 AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGG   59 (175)
Q Consensus        24 i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~   59 (175)
                      +-++.++. ++.|+++ +.++|+||.+..-++.+...
T Consensus       144 ~~~~~~~l-~~~l~~~G~~v~ivSas~~~~v~~~a~~  179 (327)
T 4as2_A          144 VFSGQREL-YNKLMENGIEVYVISAAHEELVRMVAAD  179 (327)
T ss_dssp             ECHHHHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHTC
T ss_pred             cCHHHHHH-HHHHHHCCCEEEEEeCCcHHHHHHHHhh
Confidence            34456776 8889999 99999999999888888766

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=93.41  E-value=0.028  Score=49.60  Aligned_cols=57  Identities=12%  Similarity=0.253  Sum_probs=48.3

Q ss_pred             cceEEEEecCCCccC---CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQ---PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~---~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+.+++..||+++.   -..++.+++.++ |++|+++ ++++++|||....+......+|+
T Consensus       533 G~~vl~va~d~~~~G~i~i~D~i~~~~~~a-I~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi  593 (736)
T 3rfu_A          533 GASVMFMAVDGKTVALLVVEDPIKSSTPET-ILELQQSGIEIVMLTGDSKRTAEAVAGTLGI  593 (736)
T ss_dssp             TCEEEEEEETTEEEEEEEEECCBCSSHHHH-HHHHHHHTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             CCeEEEEEECCEEEEEEEeeccchhhHHHH-HHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence            468899999999875   234689999999 9999999 99999999999998877776553

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=93.38  E-value=0.064  Score=38.29  Aligned_cols=39  Identities=21%  Similarity=0.071  Sum_probs=32.0

Q ss_pred             CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481         22 QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus        22 ~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      ..+++.+.++ |+.++++ +.++++|||+...+...++.++
T Consensus        75 ~~l~~~~~~~-l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~  114 (211)
T 1l7m_A           75 ITPTEGAEET-IKELKNRGYVVAVVSGGFDIAVNKIKEKLG  114 (211)
T ss_dssp             CCBCTTHHHH-HHHHHHTTEEEEEEEEEEHHHHHHHHHHHT
T ss_pred             CCCCccHHHH-HHHHHHCCCEEEEEcCCcHHHHHHHHHHcC
Confidence            4677889998 9999999 9999999999887766655543

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=91.25  E-value=0.057  Score=46.89  Aligned_cols=57  Identities=11%  Similarity=0.208  Sum_probs=47.1

Q ss_pred             cceEEEEecCCCccC---CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQ---PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~---~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+.+++..||+++.   -..++.+++.++ |++|+++ ++++++|||+...+....+.+|+
T Consensus       436 g~~~l~va~~~~~~G~i~~~D~l~~~~~~~-i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi  496 (645)
T 3j08_A          436 AKTAVIVARNGRVEGIIAVSDTLKESAKPA-VQELKRMGIKVGMITGDNWRSAEAISRELNL  496 (645)
T ss_dssp             TCCCEEEEETTEEEEEEEEECCCTTTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             CCeEEEEEECCEEEEEEEecCCchhHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence            456788888999865   334788999999 9999999 99999999999998877776553

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=90.65  E-value=0.096  Score=46.06  Aligned_cols=58  Identities=10%  Similarity=0.207  Sum_probs=48.1

Q ss_pred             CcceEEEEecCCCccC---CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          4 RANTICLFDVDGTLTQ---PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ...+.+++..||+++-   -..++.+++.++ |++|+++ ++++++|||....+......+|+
T Consensus       513 ~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~-i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi  574 (723)
T 3j09_A          513 EAKTAVIVARNGRVEGIIAVSDTLKESAKPA-VQELKRMGIKVGMITGDNWRSAEAISRELNL  574 (723)
T ss_dssp             TTCEEEEEEETTEEEEEEEEECCSCTTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             cCCeEEEEEECCEEEEEEeecCCcchhHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHHcCC
Confidence            3457888889999875   234789999999 9999999 99999999999998877776543

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=87.99  E-value=0.36  Score=44.13  Aligned_cols=40  Identities=10%  Similarity=0.102  Sum_probs=35.2

Q ss_pred             CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         22 QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        22 ~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      .++.+++.++ |++++++ ++++++|||++..+......+|+
T Consensus       603 Dp~r~~~~~a-I~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi  643 (1034)
T 3ixz_A          603 DPPRATVPDA-VLKCRTAGIRVIMVTGDHPITAKAIAASVGI  643 (1034)
T ss_pred             CCCchhHHHH-HHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence            4688999999 9999999 99999999999998877766654

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=83.73  E-value=0.23  Score=37.74  Aligned_cols=22  Identities=23%  Similarity=0.288  Sum_probs=17.8

Q ss_pred             CcceEEEEecCCCccCCCCCCC
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQ   25 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~   25 (175)
                      .+++.|+||.||||+..+..+.
T Consensus        26 ~~i~~v~fDktGTLT~g~~~v~   47 (263)
T 2yj3_A           26 KEIDTIIFEKTGTLTYGTPIVT   47 (263)
Confidence            4688999999999998765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d2amya1	243	c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (	2e-11
d2fuea1	244	c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human	5e-09
d1u02a_	229	c.108.1.15 (A:) Trehalose-6-phosphate phosphatase	3e-06
d1nf2a_	267	c.108.1.10 (A:) Hypothetical protein TM0651 {Therm	4e-04
d1l6ra_	225	c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa	9e-04
d1s2oa1	244	c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {	0.002
d1rkqa_	271	c.108.1.10 (A:) Hypothetical protein YidA {Escheri	0.003

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (140), Expect = 2e-11
 Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 2/133 (1%)

Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQF 66
            +CLFDVDGTLT PRQK   E  DF L+KL+    + +V GSD  KV EQL G  V+E++
Sbjct: 4   ALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQL-GNDVVEKY 61

Query: 67  DFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRT 126
           D+VFPENGLVAYK+GKL  +++I  H+GE  IQ  INYCL +++ + LP KRG FIEFR 
Sbjct: 62  DYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRN 121

Query: 127 GLINSIIDHMGED 139
           G++N         
Sbjct: 122 GMLNVSPIGRSCS 134

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (122), Expect = 5e-09
 Identities = 63/137 (45%), Positives = 90/137 (65%), Gaps = 2/137 (1%)

Query: 7   TICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQ-LGGEKVLEQ 65
            +CLFDVDGTLT  RQK   E   F L+KL+    + +V GSD  K+AEQ   G++V+E+
Sbjct: 2   VLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQIGVVGGSDYCKIAEQLGDGDEVIEK 60

Query: 66  FDFVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFR 125
           FD+VF ENG V YK+G+L  K++I +H+GE+ +Q  IN+CL +++ + LP KRG FIEFR
Sbjct: 61  FDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFR 120

Query: 126 TGLINSIIDHMGEDKIQ 142
            G++N           +
Sbjct: 121 NGMLNISPIGRSCTLEE 137

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 43.8 bits (102), Expect = 3e-06
 Identities = 21/152 (13%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 7   TICLFDVDGTLT----QPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKV 62
           ++   D DGTL      P +   +  L  L+  LK      IV+G    +++  L     
Sbjct: 1   SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERFDTYIVTGRSPEEISRFLP---- 56

Query: 63  LEQFDFVFPENGLVAYKNGKLFEKKSIIDHMGE-DKIQTFINYCLQHLSTVTLPFKRGNF 121
                 +   +G  +  NG++         +G  D+I       +     + +  K    
Sbjct: 57  --LDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAV 114

Query: 122 IEFRTGLINSIIDHMGEDKIQTFINYCLQHLS 153
           +     +   +   +     +    + ++   
Sbjct: 115 LYHLGLMGADMKPKLRSRIEEIARIFGVETYY 146

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

 Score = 37.3 bits (85), Expect = 4e-04
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 6/129 (4%)

Query: 11  FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
           FD+DGTL     +   +     ++KL    ++   SG  +         +K  ++     
Sbjct: 7   FDLDGTLLNDNLEISEKDRR-NIEKLSRKCYVVFASGRMLVSTLNVE--KKYFKRTFPTI 63

Query: 71  PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 130
             NG + Y   +       I       I  +I     H            + E     I 
Sbjct: 64  AYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQ---AYIDDVLYSEKDNEEIK 120

Query: 131 SIIDHMGED 139
           S   H   D
Sbjct: 121 SYARHSNVD 129

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 36.1 bits (82), Expect = 9e-04
 Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 8/129 (6%)

Query: 8   ICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFD 67
           +   DVDG LT   +    + ++ +    K    ++++SG+ +  V         L    
Sbjct: 5   LAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALK---IFLGING 61

Query: 68  FVFPENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTG 127
            VF ENG + + N    +K         +    F+    +  S  ++   R         
Sbjct: 62  PVFGENGGIMFDNDGSIKK-----FFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFD 116

Query: 128 LINSIIDHM 136
           +    +D++
Sbjct: 117 IDPEDVDYV 125

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

 Score = 35.8 bits (81), Expect = 0.002
 Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 8/157 (5%)

Query: 11  FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
            D+D T    +Q    E L   L   +   +LA  +G   +   E      ++E   ++ 
Sbjct: 8   SDLDNTWVGDQQAL--EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLT 65

Query: 71  PENGLVAYKNGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLIN 130
                + +  G        +    +  I   I    + L   +   +    I +      
Sbjct: 66  AVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISYH----- 120

Query: 131 SIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEF 167
            +        I        +    V + F  G  ++ 
Sbjct: 121 -LDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDL 156

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

 Score = 34.9 bits (79), Expect = 0.003
 Identities = 13/70 (18%), Positives = 24/70 (34%)

Query: 11 FDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF 70
           D+DGTL  P         + +        ++ + +G     V   L    + +  D+  
Sbjct: 9  IDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCI 68

Query: 71 PENGLVAYKN 80
            NG +  K 
Sbjct: 69 TYNGALVQKA 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.93
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.91
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.91
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.9
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.89
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.86
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	99.83
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	99.82
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	99.81
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.77
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.7
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.69
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.68
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.67
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	98.73
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	98.72
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	98.68
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	98.55
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	98.4
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.4
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	98.29
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	98.24
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	98.23
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	98.16
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	98.1
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	98.07
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	98.0
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	97.96
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	97.84
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	97.81
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	97.75
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	97.71
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	97.59
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	97.52
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	97.52
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	97.42
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	97.41
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	97.36
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	97.29
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	97.24
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	97.11
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	96.61
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	96.45
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	96.43
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	96.39
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	96.0
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	95.99
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	95.66
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	95.66
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	95.57
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	95.42
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	95.35
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	95.26
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	94.91
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	93.86
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	92.54
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	85.76

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=5.5e-26  Score=175.61  Aligned_cols=162  Identities=11%  Similarity=0.043  Sum_probs=126.3

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeEe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKLF   84 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~i   84 (175)
                      +|+|+|||||||++++++++++++++ |+++++.+++++||||++..+.+.+...+.  ...++|++|||.|+. +++.+
T Consensus         2 ~Kli~~DlDGTL~~~~~~i~~~~~~a-l~~l~~~~~~~i~TGR~~~~~~~~~~~~~~--~~~~~I~~nGa~i~~~~~~~i   78 (267)
T d1nf2a_           2 YRVFVFDLDGTLLNDNLEISEKDRRN-IEKLSRKCYVVFASGRMLVSTLNVEKKYFK--RTFPTIAYNGAIVYLPEEGVI   78 (267)
T ss_dssp             BCEEEEECCCCCSCTTSCCCHHHHHH-HHHHTTTSEEEEECSSCHHHHHHHHHHHSS--SCCCEEEGGGTEEEETTTEEE
T ss_pred             eEEEEEeCCccccCCcCccCHHHHHH-HHHHHcCCEEEEECCCChHHHHHHHHHhcc--cCCceeccCCeEEEecccccc
Confidence            68999999999999999999999999 999987777999999999998777765421  123689999999996 67888


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccc----------c-ccch---------------hhccH
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL----------I-NSII---------------DHMGE  138 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~-~~~~---------------~~~~~  138 (175)
                      +.+.+    +.+.+.++++++.++...+.++..++.|.......          . ...+               .....
T Consensus        79 ~~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  154 (267)
T d1nf2a_          79 LNEKI----PPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTP  154 (267)
T ss_dssp             EECCB----CHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCH
T ss_pred             cccCC----CHHHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccH
Confidence            88888    99999999999999887665555555554322100          0 0000               11235


Q ss_pred             HHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        139 DKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       139 ~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +..+++.+.+.+.+++ +.+..+++.++ ++|+|+||.
T Consensus       155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~  192 (267)
T d1nf2a_         155 ERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKG  192 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHH
T ss_pred             HHHHHHHHHHHHhhCCcEEEEEeecceeeecCCCCchh
Confidence            5667888888888885 88888999999 999999995

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=5.7e-25  Score=169.42  Aligned_cols=164  Identities=13%  Similarity=0.089  Sum_probs=121.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee--CCe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK--NGK   82 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~--~~~   82 (175)
                      +|+|+|||||||++++++++++++++ |++|+++ +.+++||||++..+.+.++.+++.....++|++||+.++.  +|+
T Consensus         4 iKli~~DlDGTL~~~~~~i~~~~~~a-l~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~   82 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPDHTISPAVKNA-IAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGS   82 (271)
T ss_dssp             CCEEEECCCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCC
T ss_pred             eeEEEEeCCccccCCCCccCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCe
Confidence            99999999999999999999999999 9999999 9999999999999988887766544456799999999985  688


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccc-----------cc--------cch--------hh
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL-----------IN--------SII--------DH  135 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~--------~~~--------~~  135 (175)
                      .+++..+    +.+.++.+.+.+.+....+..+...+.+.......           ..        ..+        .+
T Consensus        83 ~i~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (271)
T d1rkqa_          83 TVAQTAL----SYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMI  158 (271)
T ss_dssp             EEEECCB----CHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEE
T ss_pred             EEEeecc----cHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEe
Confidence            8888888    99999999999888766543333333332211000           00        000        11


Q ss_pred             ccHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        136 MGEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       136 ~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ..+....+..+.+.+.+++ +.++.++++++ +.|+|+||.
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~  199 (271)
T d1rkqa_         159 DEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKG  199 (271)
T ss_dssp             CCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHH
T ss_pred             cCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcc
Confidence            2333444555655555553 66778888999 999999994

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=1.4e-24  Score=168.18  Aligned_cols=106  Identities=15%  Similarity=0.236  Sum_probs=93.0

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee-CCeE
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK-NGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~-~~~~   83 (175)
                      +|+|+|||||||+++++.++++++++ |++|+++ +.|++||||++..+.+.+..+++.   .++|++||+.+++ ++++
T Consensus         1 iKli~~DlDGTLl~~~~~i~~~~~~~-l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~---~~~i~~nG~~i~~~~~~~   76 (285)
T d1nrwa_           1 MKLIAIDLDGTLLNSKHQVSLENENA-LRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK---TWVISANGAVIHDPEGRL   76 (285)
T ss_dssp             CCEEEEECCCCCSCTTSCCCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC---CEEEEGGGTEEECTTCCE
T ss_pred             CeEEEEECCccccCCCCccCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHHhCCC---cEEEecCceeEEecCCce
Confidence            68999999999999999999999999 9999999 999999999999999999887643   3899999999996 6889


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhccccccccccc
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRG  119 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  119 (175)
                      +++..+    +.+.+.++++++.+++..+.++..+.
T Consensus        77 i~~~~i----~~~~~~~i~~~~~~~~~~~~~~~~~~  108 (285)
T d1nrwa_          77 YHHETI----DKKRAYDILSWLESENYYYEVFTGSA  108 (285)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             eeeccC----CHHHHHHHHHHHHHcCCceEEecCce
Confidence            998888    99999999999998876544443333

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.90  E-value=6.7e-25  Score=168.82  Aligned_cols=163  Identities=13%  Similarity=0.152  Sum_probs=116.3

Q ss_pred             ceEEEEecCCCccCCC-CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          6 NTICLFDVDGTLTQPR-QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~-~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      .|+|||||||||++++ +.+|++++++ |++|+++ +.|++||||++..+..+.....+ ...+++|++|||.++.+++.
T Consensus         1 ~k~if~DlDGTL~~~~~~~i~~~~~~a-l~~l~~~gi~v~~~TGR~~~~~~~l~~~~~~-~~~~~~I~~nGa~i~~~~~~   78 (260)
T d2rbka1           1 TKALFFDIDGTLVSFETHRIPSSTIEA-LEAAHAKGLKIFIATGRPKAIINNLSELQDR-NLIDGYITMNGAYCFVGEEV   78 (260)
T ss_dssp             CCEEEECSBTTTBCTTTSSCCHHHHHH-HHHHHHTTCEEEEECSSCGGGCCSCHHHHHT-TCCCEEEEGGGTEEEETTEE
T ss_pred             CeEEEEECCCCCcCCCCCCCCHHHHHH-HHHHHHCCCEEEEECCCCHHHHHHHHHHHhc-CCCCceEecCCcccccCccc
Confidence            3899999999999875 5899999999 9999999 99999999998876432211000 12347999999999999999


Q ss_pred             eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccc--------cc--cch--hh----------ccHHHH
Q psy16481         84 FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGL--------IN--SII--DH----------MGEDKI  141 (175)
Q Consensus        84 i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~--~~~--~~----------~~~~~~  141 (175)
                      ++...|    +.+.++++++++.+++....++..++.++......        ..  ..+  .+          ......
T Consensus        79 i~~~~l----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (260)
T d2rbka1          79 IYKSAI----PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFIT  154 (260)
T ss_dssp             EEECCC----CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECCC
T ss_pred             ccccCC----CHHHHHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEeecCC
Confidence            998888    99999999999999877655555555444322100        00  000  00          000000


Q ss_pred             HHHHHHHHHhcCCCCCceeecceE-EecCCcccC
Q psy16481        142 QTFINYCLQHLSTVTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       142 ~~~~~~l~~~~~~~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ......+.+.++..++..+.+.++ ++|+|+||.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~ei~p~~~sK~  188 (260)
T d2rbka1         155 EEEEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQ  188 (260)
T ss_dssp             HHHHHHHGGGSTTCEEECSSTTCCEEESTTCSHH
T ss_pred             HHHHHHHHHHhccccceeecCcEEEEEeCCCCHH
Confidence            122455667778888888889999 999999994

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.9e-23  Score=160.72  Aligned_cols=162  Identities=14%  Similarity=0.115  Sum_probs=116.3

Q ss_pred             cceEEEEecCCCccCCCCCCC-HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQ-NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~-~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      .+|+||||+||||++++++++ +.+.++ |++|+++ +.|++||||++..+.+.++.++..   .++|++||+.|+..|+
T Consensus         1 ~IKli~~DlDGTLl~~~~~~~~~~~~~~-l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~   76 (269)
T d1rlma_           1 AVKVIVTDMDGTFLNDAKTYNQPRFMAQ-YQELKKRGIKFVVASGNQYYQLISFFPELKDE---ISFVAENGALVYEHGK   76 (269)
T ss_dssp             CCCEEEECCCCCCSCTTSCCCHHHHHHH-HHHHHHHTCEEEEECSSCHHHHGGGCTTTTTT---SEEEEGGGTEEEETTE
T ss_pred             CEEEEEEeCCccCcCCCCcCChHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcc---cceEeeceeEEEECCc
Confidence            379999999999999988776 678999 9999999 999999999999998888876532   3799999999998888


Q ss_pred             EeeccchhhhhCHHHHHH-HHHHHHHhcccccccccccceeeecccc-------------ccc------c-h-----hhc
Q psy16481         83 LFEKKSIIDHMGEDKIQT-FINYCLQHLSTVTLPFKRGNFIEFRTGL-------------INS------I-I-----DHM  136 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~------~-~-----~~~  136 (175)
                      .++...+    ..+.... +.+++......+.+++.++.|+......             ...      . .     ...
T Consensus        77 ~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (269)
T d1rlma_          77 QLFHGEL----TRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNL  152 (269)
T ss_dssp             EEEECCC----CHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEEC
T ss_pred             EEEEecc----chHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecC
Confidence            7776555    5555444 4455555544444444455554322100             000      0 0     112


Q ss_pred             cHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        137 GEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       137 ~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      ..+....+.+.+...+.. ...+.++++++ ++|+|+||.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~  192 (269)
T d1rlma_         153 PDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKA  192 (269)
T ss_dssp             CGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHH
T ss_pred             CHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHH
Confidence            345566778888888774 67778888999 999999995

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.86  E-value=5.1e-22  Score=152.89  Aligned_cols=169  Identities=18%  Similarity=0.168  Sum_probs=122.1

Q ss_pred             CCCCcceEEEEecCCCccC-CCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc---cccceEEecCCc
Q psy16481          1 MTCRANTICLFDVDGTLTQ-PRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL---EQFDFVFPENGL   75 (175)
Q Consensus         1 ~~~~~~kli~~DlDGTLl~-~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~---~~~~~~i~~NGa   75 (175)
                      |.-..+|+|+|||||||++ +++.++++++++ |++|+++ +.|++||||++..+.+.++.+++.   ....+.|+.||+
T Consensus         5 ~~~~~ikli~~DlDGTLl~~~~~~i~~~~~~a-l~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~   83 (283)
T d2b30a1           5 LKGADIKLLLIDFDGTLFVDKDIKVPSENIDA-IKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGT   83 (283)
T ss_dssp             TTTCCCCEEEEETBTTTBCCTTTCSCHHHHHH-HHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGT
T ss_pred             CcccCccEEEEECCCCCcCCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeee
Confidence            4456899999999999985 457999999999 9999998 999999999999998877654321   112357899999


Q ss_pred             eeee-CCeEeeccchhhhhCHHHHHHHHHHHHHhcccccccc--cccceeeeccccc-----------ccc---------
Q psy16481         76 VAYK-NGKLFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPF--KRGNFIEFRTGLI-----------NSI---------  132 (175)
Q Consensus        76 ~i~~-~~~~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~i~~~~~~~-----------~~~---------  132 (175)
                      .++. .++.++...+    +.+...++++.+...+.....+.  .+..|+.......           ...         
T Consensus        84 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (283)
T d2b30a1          84 IVYDQIGYTLLDETI----ETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKY  159 (283)
T ss_dssp             EEECTTCCEEEECCC----CHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTC
T ss_pred             EEEcCCCcEeeeccc----CHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhc
Confidence            9995 6777787777    99999999999888765322222  2223332111000           000         


Q ss_pred             ------hhhccHHHHHHHHHHHHHhcCC-CCCceeecceE-EecCCcccC
Q psy16481        133 ------IDHMGEDKIQTFINYCLQHLST-VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       133 ------~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                            ..+...++..++.+.+.+.++. ..+..+.++++ +.|+|+||.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~  209 (283)
T d2b30a1         160 RTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKY  209 (283)
T ss_dssp             CCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHH
T ss_pred             ccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhH
Confidence                  0123445677888999988875 66677788889 999999995

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.7e-20  Score=138.10  Aligned_cols=164  Identities=37%  Similarity=0.559  Sum_probs=102.9

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      ..||++|||||||++++++++++++++ |++|+++..+++||||++..+...+..... ....++++.||++++..++.+
T Consensus         2 ~~kl~~fDlDGTLl~~~~~i~~~~~~a-l~~l~~~g~~~i~Tgr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   79 (243)
T d2amya1           2 GPALCLFDVDGTLTAPRQKITKEMDDF-LQKLRQKIKIGVVGGSDFEKVQEQLGNDVV-EKYDYVFPENGLVAYKDGKLL   79 (243)
T ss_dssp             CSEEEEEESBTTTBCTTSCCCHHHHHH-HHHHTTTSEEEEECSSCHHHHHHHHCTTHH-HHCSEEESGGGTEEEETTEEE
T ss_pred             CCEEEEEcCcCCeeCCCCcCCHHHHHH-HHHHHcCCCEEEEcCCChHHhHHHHhhhcc-ccceEEecCcEEEEecCCccc
Confidence            469999999999999999999999999 999998855889999999998887766421 122245555666666788988


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhccccccccccccee----eecccccccc-------h--------hhccHHHHHHHH
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFI----EFRTGLINSI-------I--------DHMGEDKIQTFI  145 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~-------~--------~~~~~~~~~~~~  145 (175)
                      +...+    +.+...++.............+.....+.    ..........       .        .........+..
T Consensus        80 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (243)
T d2amya1          80 CRQNI----QSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFV  155 (243)
T ss_dssp             EECCH----HHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHH
T ss_pred             eecch----hHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHH
Confidence            88777    55555555554443332211111111110    1000000000       0        001112333556


Q ss_pred             HHHHHhcCC--CCCceeecceE-EecCCcccC
Q psy16481        146 NYCLQHLST--VTLPFKRGNFI-EFRTGLINH  174 (175)
Q Consensus       146 ~~l~~~~~~--~~~~~s~~~~i-i~~~Gv~K~  174 (175)
                      +.+.+.++.  +.+..++++++ ++|+|+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg  187 (243)
T d2amya1         156 ADLRKEFAGKGLTFSIGGQISFDVFPDGWDKR  187 (243)
T ss_dssp             HHHHHHTTTSCEEEEEETTTEEEEEETTCSGG
T ss_pred             HHHHHHhcccceEEEecCCccceeeccccCHH
Confidence            666666653  55566778889 999999996

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.82  E-value=4.1e-20  Score=137.62  Aligned_cols=153  Identities=16%  Similarity=0.071  Sum_probs=91.9

Q ss_pred             EEEEecCCCccC-----CCCCCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCe
Q psy16481          8 ICLFDVDGTLTQ-----PRQKAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGK   82 (175)
Q Consensus         8 li~~DlDGTLl~-----~~~~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~   82 (175)
                      ||+|||||||++     +++.++++++++ |++|++++.|+|||||++..+.......      .+++++||+.++.++.
T Consensus         2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~-l~~l~~~~~v~i~TGR~~~~l~~~~~~~------~~~~~~ng~~~~~~~~   74 (229)
T d1u02a_           2 LIFLDYDGTLVPIIMNPEESYADAGLLSL-ISDLKERFDTYIVTGRSPEEISRFLPLD------INMICYHGACSKINGQ   74 (229)
T ss_dssp             EEEEECBTTTBCCCSCGGGCCCCHHHHHH-HHHHHHHSEEEEECSSCHHHHHHHSCSS------CEEEEGGGTEEEETTE
T ss_pred             EEEEEecCCCCCCCCChhhCCCCHHHHHH-HHHHhhCCCEEEEcCCCHHHhhhhcCcc------ccEEecCeEEEecCCc
Confidence            899999999997     345799999999 9999866779999999999998766442      3789999999988877


Q ss_pred             EeeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccchhhccHHHHHHHHHHHHHhcCC-CCCceee
Q psy16481         83 LFEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSIIDHMGEDKIQTFINYCLQHLST-VTLPFKR  161 (175)
Q Consensus        83 ~i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~  161 (175)
                      .......  ....+.++++.+.+.....     ...+.+...+.....+..............+.+.+.+.+ .-.+.++
T Consensus        75 ~~~~~~~--~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  147 (229)
T d1u02a_          75 IVYNNGS--DRFLGVFDRIYEDTRSWVS-----DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYG  147 (229)
T ss_dssp             EEECTTG--GGGHHHHHHHHHHHTTHHH-----HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEEC
T ss_pred             eeeecch--hhhHHHHHHHHHHhHHhhc-----ccCCceecccccceeeeehhhhhhhHHHHHHHHHHHhhcCCeEEEee
Confidence            6654322  1133444555444433211     122222222211111110011111111222333333322 1235677


Q ss_pred             cceE-EecCCcccC
Q psy16481        162 GNFI-EFRTGLINH  174 (175)
Q Consensus       162 ~~~i-i~~~Gv~K~  174 (175)
                      ..++ ++|+|+||.
T Consensus       148 ~~~idi~p~g~~Kg  161 (229)
T d1u02a_         148 KMIIELRVPGVNKG  161 (229)
T ss_dssp             SSEEEEECTTCCHH
T ss_pred             ceEEEEecCCCCHH
Confidence            8889 999999995

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.4e-19  Score=135.13  Aligned_cols=81  Identities=52%  Similarity=0.851  Sum_probs=62.4

Q ss_pred             eEEE-EecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHh-cCCCcccccceEEecCCceeeeCCeE
Q psy16481          7 TICL-FDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQL-GGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         7 kli~-~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~-~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      |+|+ ||||||||+++++++++++++ |++|+++ +. +++|||.+......+ ..++......++++.||+.++..++.
T Consensus         1 k~i~lFDlDGTLl~~~~~is~~~~~~-i~~l~~~g~~-~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   78 (244)
T d2fuea1           1 RVLCLFDVDGTLTPARQKIDPEVAAF-LQKLRSRVQI-GVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGRL   78 (244)
T ss_dssp             CEEEEEESBTTTBSTTSCCCHHHHHH-HHHHTTTSEE-EEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTEE
T ss_pred             CEEEEEccccCccCCCCcCCHHHHHH-HHHHHhCCCE-EEEecCChhhhhhhhhhhhccccccceeecccceeeccCCcc
Confidence            5677 699999999999999999999 9999998 64 556666666655544 43322223457889999999988888


Q ss_pred             eeccch
Q psy16481         84 FEKKSI   89 (175)
Q Consensus        84 i~~~~l   89 (175)
                      ++.+.+
T Consensus        79 ~~~~~~   84 (244)
T d2fuea1          79 LSKQTI   84 (244)
T ss_dssp             CCCCCH
T ss_pred             ceeech
Confidence            887776

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.77  E-value=1.3e-18  Score=129.58  Aligned_cols=81  Identities=19%  Similarity=0.195  Sum_probs=68.3

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      |+|+|+||+||||+++++.++++++++ |++|+++ +.|++||||++..+...+...++.   .+++++||+.++..+..
T Consensus         1 kiK~i~~D~DGTL~~~~~~i~~~~~~~-l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~---~~~i~~~g~~~~~~~~~   76 (230)
T d1wr8a_           1 KIKAISIDIDGTITYPNRMIHEKALEA-IRRAESLGIPIMLVTGNTVQFAEAASILIGTS---GPVVAEDGGAISYKKKR   76 (230)
T ss_dssp             CCCEEEEESTTTTBCTTSCBCHHHHHH-HHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEEETTEE
T ss_pred             CceEEEEecCCCCcCCCCccCHHHHHH-HHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCC---cccccccceeeeccccc
Confidence            689999999999999999999999999 9999999 999999999999988777654322   36899999999976665


Q ss_pred             eeccch
Q psy16481         84 FEKKSI   89 (175)
Q Consensus        84 i~~~~l   89 (175)
                      ......
T Consensus        77 ~~~~~~   82 (230)
T d1wr8a_          77 IFLASM   82 (230)
T ss_dssp             EESCCC
T ss_pred             cccccc
Confidence            554443

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=5.1e-18  Score=126.28  Aligned_cols=73  Identities=16%  Similarity=0.137  Sum_probs=64.6

Q ss_pred             CcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          4 RANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      ++..||++||||||+++++.++++++++ |++|+++ +.|++||||++.++.+.+..+++.  ..++|++||+.++.
T Consensus         2 ~~~~li~~DlDGTLl~~~~~i~~~~~~a-l~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~--~~~~i~~nGa~i~~   75 (232)
T d1xvia_           2 QQPLLVFSDLDGTLLDSHSYDWQPAAPW-LTRLREANVPVILCSSKTSAEMLYLQKTLGLQ--GLPLIAENGAVIQL   75 (232)
T ss_dssp             CCCEEEEEECTTTTSCSSCCSCCTTHHH-HHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT--TSCEEEGGGTEEEC
T ss_pred             CCCEEEEEECCCCccCCcCcCCHHHHHH-HHHHHHCCCEEEEEeCCChhhchhHHHHhccC--CceEEccCCeEEEe
Confidence            4556999999999999999999999999 9999999 999999999999998888876542  23699999999985

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.69  E-value=4.9e-17  Score=121.76  Aligned_cols=95  Identities=18%  Similarity=0.228  Sum_probs=72.6

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeEe
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKLF   84 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~i   84 (175)
                      +|+|+|||||||+++++.+++++.++ |++|+++ +.++++|||++..+..+...+++.   .+++++||+.++..+..+
T Consensus         3 iKli~~D~DGTL~~~~~~i~~~~~~a-l~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~---~~~i~~~G~~~~~~~~~~   78 (225)
T d1l6ra_           3 IRLAAIDVDGNLTDRDRLISTKAIES-IRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN---GPVFGENGGIMFDNDGSI   78 (225)
T ss_dssp             CCEEEEEHHHHSBCTTSCBCHHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC---SCEEEGGGTEEECTTSCE
T ss_pred             eEEEEEecCCCCcCCCCcCCHHHHHH-HHHHHHCCCEEEEEcCCchhhhHHHHHHcCCC---ceEEeecceEEEeCCccE
Confidence            69999999999999999999999999 9999999 999999999998876655544322   368999999998754433


Q ss_pred             eccchhhhhCHHHHHHHHHHHHHhc
Q psy16481         85 EKKSIIDHMGEDKIQTFINYCLQHL  109 (175)
Q Consensus        85 ~~~~l~~~l~~~~~~~i~~~~~~~~  109 (175)
                      . ..+    ..+...++++.+.+..
T Consensus        79 ~-~~~----~~~~~~~~~~~~~~~~   98 (225)
T d1l6ra_          79 K-KFF----SNEGTNKFLEEMSKRT   98 (225)
T ss_dssp             E-ESS----CSHHHHHHHHHHTTTS
T ss_pred             E-Eec----ChHHHHHHHHHHHHhc
Confidence            2 223    4555556555554443

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.68  E-value=3.9e-17  Score=123.51  Aligned_cols=158  Identities=13%  Similarity=0.054  Sum_probs=92.2

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeeeCCeE
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYKNGKL   83 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~~~~~   83 (175)
                      ++.||+||+||||+++++.+  +..++ +.+++++ +.|++||||++..+.++++..++. ..+++|++||+.++.....
T Consensus         2 ~~~li~~DlDGTL~~~~~~~--~~~~~-~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~-~~~~~i~~~G~~i~~~~~~   77 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGDQQAL--EHLQE-YLGDRRGNFYLAYATGRSYHSARELQKQVGLM-EPDYWLTAVGSEIYHPEGL   77 (244)
T ss_dssp             CSEEEEECTBTTTBSCHHHH--HHHHH-HHHTTGGGEEEEEECSSCHHHHHHHHHHHTCC-CCSEEEETTTTEEEETTEE
T ss_pred             CceEEEEECcccCCCCCCCH--HHHHH-HHHHHcCCCEEEEECCCCHHHHHHHHHHcCCC-CCceEEeccceEEEEccCc
Confidence            35699999999999987644  55677 7777777 999999999999998887765432 2347899999999964332


Q ss_pred             --eeccchhhhhCHHHHHHHHHHHHHhcccccccccccceeeecccccccch-hhccHHHHHHHHHHHHHhcCCCCCcee
Q psy16481         84 --FEKKSIIDHMGEDKIQTFINYCLQHLSTVTLPFKRGNFIEFRTGLINSII-DHMGEDKIQTFINYCLQHLSTVTLPFK  160 (175)
Q Consensus        84 --i~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~s  160 (175)
                        .+...+    +.+..++++....+............    .......+.. .-..+....++...+.+..........
T Consensus        78 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (244)
T d1s2oa1          78 DQHWADYL----SEHWQRDILQAIADGFEALKPQSPLE----QNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFS  149 (244)
T ss_dssp             CHHHHHHH----HTTCCHHHHHHHHHTCTTEEECCGGG----CBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEE
T ss_pred             chHHHHHH----HHHHhHHHHHHHHhhcccccccChhh----hcceEEEEeccccccHHHHHHHHHHHHhhcccceeeec
Confidence              222333    22222333222222222111110000    0000000000 011223334555555555556666677


Q ss_pred             ecceE-EecCCcccC
Q psy16481        161 RGNFI-EFRTGLINH  174 (175)
Q Consensus       161 ~~~~i-i~~~Gv~K~  174 (175)
                      .++++ ++|+|++|.
T Consensus       150 ~~~~~~i~~~~~~K~  164 (244)
T d1s2oa1         150 SGKDVDLLPQRSNKG  164 (244)
T ss_dssp             TTTEEEEEETTCSHH
T ss_pred             CCcEEEEEeCccchh
Confidence            88889 999999994

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.67  E-value=2.1e-17  Score=123.96  Aligned_cols=68  Identities=16%  Similarity=0.169  Sum_probs=59.8

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEecCCceeee
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFPENGLVAYK   79 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~~NGa~i~~   79 (175)
                      +|+||+||||||+++..  +++++++ |++|+++ +.|++||||++..+.+++..+++.   .++|++||+.++.
T Consensus         2 iKli~~DlDGTLl~~~~--~~~~~~a-i~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~---~~~i~~nGa~i~~   70 (243)
T d1wzca1           2 IRLIFLDIDKTLIPGYE--PDPAKPI-IEELKDMGFEIIFNSSKTRAEQEYYRKELEVE---TPFISENGSAIFI   70 (243)
T ss_dssp             EEEEEECCBTTTBSSSC--SGGGHHH-HHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC---SCEEETTTTEEEE
T ss_pred             cEEEEEeCCCCCCCCCC--CHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc---ccccccCCcEEEc
Confidence            69999999999998654  6789999 9999999 999999999999998888876532   3689999999996

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=98.73  E-value=2.9e-09  Score=80.31  Aligned_cols=58  Identities=19%  Similarity=0.280  Sum_probs=47.8

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCc
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKV   62 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~   62 (175)
                      ++++|+|+||+||||+++.+.+ +.+.++ |++|+++ .+++++|   +|+...+...+..+|+
T Consensus         4 ~~~ik~vlFDlDGTL~~~~~~i-~~a~e~-l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~   65 (261)
T d1vjra_           4 LDKIELFILDMDGTFYLDDSLL-PGSLEF-LETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGV   65 (261)
T ss_dssp             GGGCCEEEECCBTTTEETTEEC-TTHHHH-HHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTC
T ss_pred             HHhCCEEEEeCCCeeEECCccC-chHHHH-HHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcc
Confidence            6789999999999999988877 577899 9999999 9999998   5666666666655554

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=98.72  E-value=3.1e-09  Score=79.90  Aligned_cols=56  Identities=16%  Similarity=0.266  Sum_probs=47.3

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEc---CCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVS---GSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaT---GR~~~~~~~~~~~~~~   62 (175)
                      ++|+|+||+||||+++++.++ .+.++ |++|+++ ++++++|   +|+...+.+.+..+|+
T Consensus         2 ~ik~VifDlDGTL~~~~~~i~-~a~e~-i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~   61 (250)
T d2c4na1           2 TIKNVICDIDGVLMHDNVAVP-GAAEF-LHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV   61 (250)
T ss_dssp             CCCEEEEECBTTTEETTEECT-THHHH-HHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCeeEECCCcCc-cHHHH-HHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence            389999999999999988885 67899 9999999 9999987   7788888777766554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=98.68  E-value=9.7e-09  Score=70.91  Aligned_cols=48  Identities=25%  Similarity=0.357  Sum_probs=40.4

Q ss_pred             CCCcceEEEEecCCCccCCCC------------CCCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          2 TCRANTICLFDVDGTLTQPRQ------------KAQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         2 ~~~~~kli~~DlDGTLl~~~~------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      ++.+.|.|+||+||||+++.+            .+-+...+. |+.|+++ +.++++|||+-
T Consensus         3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~-l~~l~~~G~~Iii~T~R~~   63 (149)
T d1ltqa1           3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVEL-SKMYALMGYQIVVVSGRES   63 (149)
T ss_dssp             CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHH-HHHHHHTTCEEEEEECSCC
T ss_pred             CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHH-HHHHHhccCeEEEEecCcH
Confidence            467789999999999987422            456778898 9999999 99999999983

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.55  E-value=2e-08  Score=75.31  Aligned_cols=50  Identities=22%  Similarity=0.314  Sum_probs=41.3

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQL   57 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~   57 (175)
                      +|.|+||+||||+++++.+ +.+.++ |++|++. ++|+++|+   |+...+...+
T Consensus         2 yk~v~fDlDGTL~~~~~~i-~~a~~~-i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L   55 (253)
T d1yv9a1           2 YQGYLIDLDGTIYLGKEPI-PAGKRF-VERLQEKDLPFLFVTNNTTKSPETVAQRL   55 (253)
T ss_dssp             CCEEEECCBTTTEETTEEC-HHHHHH-HHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CCEEEEcCCCccEeCCCcC-ccHHHH-HHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence            6899999999999998887 678899 9999999 99999975   5555554433

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.40  E-value=1e-08  Score=73.55  Aligned_cols=41  Identities=12%  Similarity=0.090  Sum_probs=29.2

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHH
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQ   56 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~   56 (175)
                      .|||||||||||+++       +.+. +  ++++ +.++++|||+.....+.
T Consensus         2 mkli~fDlDGTLl~e-------~~~~-~--a~~~Gi~~~~~tgR~~~~~~~~   43 (206)
T d1rkua_           2 MEIACLDLEGVLVPE-------IWIA-F--AEKTGIDALKATTRDIPDYDVL   43 (206)
T ss_dssp             CEEEEEESBTTTBCC-------HHHH-H--HHHHTCGGGGCCTTTCCCHHHH
T ss_pred             cEEEEEcCccchHHH-------HHHH-H--HHHcCCHHHHHHCCCCCCHHHH
Confidence            489999999999973       2333 2  2344 88899999987554443

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.40  E-value=1e-06  Score=59.39  Aligned_cols=76  Identities=21%  Similarity=0.305  Sum_probs=52.3

Q ss_pred             eEEEEecCCCccCCCC------CCCHHHHHHHHHhhCCC-eEEEEEcCCCH---------------HHHHHHhcCCCccc
Q psy16481          7 TICLFDVDGTLTQPRQ------KAQNETLDFLLKKLKPL-SHLAIVSGSDM---------------NKVAEQLGGEKVLE   64 (175)
Q Consensus         7 kli~~DlDGTLl~~~~------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~---------------~~~~~~~~~~~~~~   64 (175)
                      |-|+||+||||....+      .+-+.+++. |+.|.++ .++++.|+|..               ....++|...|++ 
T Consensus         2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~-l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~-   79 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQ-LREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP-   79 (124)
T ss_dssp             CEEEECSTTTTBCCCCSCGGGCCBCHHHHHH-HHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC-
T ss_pred             CEEEEeCCCCeECCCCCCcCccCcCHHHHHH-HHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC-
Confidence            5689999999977432      466888999 9999998 99999999962               2245677776653 


Q ss_pred             ccceEEec---C-CceeeeCCeEee
Q psy16481         65 QFDFVFPE---N-GLVAYKNGKLFE   85 (175)
Q Consensus        65 ~~~~~i~~---N-Ga~i~~~~~~i~   85 (175)
                       ++.++..   . .+-+|.+++-+.
T Consensus        80 -Yd~Li~gKP~~~~~d~yIDDkai~  103 (124)
T d1xpja_          80 -YDEILVGKPWCGHDGFYIDDRAVR  103 (124)
T ss_dssp             -CSEEEECCCCCCTTCEEECTTEEC
T ss_pred             -ceEEEECCCCCCCCCEEeeCCCCC
Confidence             3455541   1 233555555554

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=98.29  E-value=3.1e-07  Score=66.44  Aligned_cols=44  Identities=20%  Similarity=0.181  Sum_probs=34.3

Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ...+. |+.|+++ ++++++||.+...+...+..+|+...++.+++
T Consensus        99 ~~~~~-L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~  143 (224)
T d2hsza1          99 NVKET-LEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLG  143 (224)
T ss_dssp             THHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEEC
T ss_pred             HHHHH-HHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccc
Confidence            34566 8888888 99999999999998888888776555555554

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.24  E-value=6.7e-07  Score=65.93  Aligned_cols=45  Identities=16%  Similarity=0.259  Sum_probs=31.4

Q ss_pred             HHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         26 NETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        26 ~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      +...++ |++|++++.++++|+.+...+...+...|+...++.+++
T Consensus       112 ~~~~~~-L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~  156 (247)
T d2gfha1         112 DDVKAM-LTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVI  156 (247)
T ss_dssp             HHHHHH-HHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             ccHHHH-HHHhhcccceEEeecccchhhhhhhhhcccccccccccc
Confidence            455667 888875588999999888877666666555444555544

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=98.23  E-value=2.6e-07  Score=69.19  Aligned_cols=51  Identities=25%  Similarity=0.355  Sum_probs=41.8

Q ss_pred             cceEEEEecCCCccCCCCCCCHHHHHHHHHhhCCC-eEEEEEcC---CCHHHHHHHh
Q psy16481          5 ANTICLFDVDGTLTQPRQKAQNETLDFLLKKLKPL-SHLAIVSG---SDMNKVAEQL   57 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l~~~-i~~~iaTG---R~~~~~~~~~   57 (175)
                      ++|.|+||+||||++.+..+ +...++ |++|+++ +.++++|+   |+...+.+.+
T Consensus         1 tyk~vlFDlDGTL~~~~~~i-~~a~e~-l~~l~~~g~~~~~~TN~s~~~~~~~~~~l   55 (253)
T d1wvia_           1 TYKGYLIDLDGTIYKGKDRI-PAGEDF-VKRLQERQLPYILVTNNTTRTPEMVQEML   55 (253)
T ss_dssp             CCCEEEEECBTTTEETTEEC-HHHHHH-HHHHHHHTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CcCEEEEcCcCceEECCCcC-ccHHHH-HHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence            47999999999999987776 678999 9999998 99999985   4555555544

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.16  E-value=6.6e-07  Score=62.74  Aligned_cols=54  Identities=22%  Similarity=0.150  Sum_probs=40.6

Q ss_pred             ceEEEEecCCCccCCC------------------------CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH-HHHhcC
Q psy16481          6 NTICLFDVDGTLTQPR------------------------QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV-AEQLGG   59 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~------------------------~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~-~~~~~~   59 (175)
                      .|+|+||+||||++..                        -.+-|...+. |++|+++ +.+++||+.+.... ...++.
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~-L~~L~~~G~~~~v~S~~~~~~~~~~~l~~   83 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEV-LGRLQSLGVPVAAASRTSEIQGANQLLEL   83 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHH-HHHHHHTTCCEEEEECCSCHHHHHHHHHH
T ss_pred             CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHH-HHHHHHCCCcEEEEeccccchhhccchhc
Confidence            4899999999997621                        1345678899 9999999 99999998776554 334444


Q ss_pred             C
Q psy16481         60 E   60 (175)
Q Consensus        60 ~   60 (175)
                      +
T Consensus        84 ~   84 (164)
T d1u7pa_          84 F   84 (164)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=98.10  E-value=1.3e-06  Score=62.90  Aligned_cols=42  Identities=12%  Similarity=0.212  Sum_probs=32.0

Q ss_pred             HHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         28 TLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        28 ~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      +.+. |++|+++++++++|+.....+...++.+++...++.++
T Consensus        87 ~~~~-L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~  128 (207)
T d2hdoa1          87 ITSL-FEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTI  128 (207)
T ss_dssp             HHHH-HHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEE
T ss_pred             hhhh-hhhhcccccccccccccccccccccccccccccccccc
Confidence            5667 88887568899999999999998898877644444444

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=98.07  E-value=1.2e-06  Score=63.38  Aligned_cols=43  Identities=14%  Similarity=0.114  Sum_probs=34.6

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ..+. |+.|+++ ++++++||++...+...++..++...++.+++
T Consensus        93 ~~~~-l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~  136 (218)
T d1te2a_          93 VREA-VALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS  136 (218)
T ss_dssp             HHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEE
T ss_pred             HHHH-HHHhhhcccccccccccccccccccccccccccccccccc
Confidence            5567 9999998 99999999999988888877776555666554

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=98.00  E-value=2.4e-06  Score=57.33  Aligned_cols=53  Identities=21%  Similarity=0.171  Sum_probs=40.1

Q ss_pred             EEEEecCCCccCCCC----CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHH---HHHhcCCC
Q psy16481          8 ICLFDVDGTLTQPRQ----KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKV---AEQLGGEK   61 (175)
Q Consensus         8 li~~DlDGTLl~~~~----~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~---~~~~~~~~   61 (175)
                      -|++|+||||...+.    ..-+.+.+. |++|.++ ..+++.|||+-...   ..++...+
T Consensus         2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~-l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~   62 (122)
T d2obba1           2 TIAVDFDGTIVEHRYPRIGEEIPFAVET-LKLLQQEKHRLILWSVREGELLDEAIEWCRARG   62 (122)
T ss_dssp             EEEECCBTTTBCSCTTSCCCBCTTHHHH-HHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTT
T ss_pred             EEEEEcCCCcCCCCCCccccccHHHHHH-HHHHHHCCCeEEEEecCCCcchHHHHHHHHHcC
Confidence            389999999977432    345678899 9999998 99999999987653   34555544

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.96  E-value=4.2e-06  Score=60.87  Aligned_cols=43  Identities=16%  Similarity=0.111  Sum_probs=31.4

Q ss_pred             HHHHHHHhhCCC--eEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         28 TLDFLLKKLKPL--SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        28 ~~~~~l~~l~~~--i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ..+. |++|+++  +.++++||.+...+...++.+|+...++.+++
T Consensus        96 ~~~~-L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~  140 (228)
T d2hcfa1          96 VREL-LDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAF  140 (228)
T ss_dssp             HHHH-HHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEEC
T ss_pred             hHHH-HhhhhccccccccccCCCcchhhhhhhhhhccccccccccc
Confidence            3445 7777765  88999999999988888888776555554443

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=97.84  E-value=5.5e-06  Score=58.09  Aligned_cols=44  Identities=23%  Similarity=0.320  Sum_probs=36.2

Q ss_pred             cceEEEEecCCCccCCCC-----------CCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ-----------KAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~-----------~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      +.|.|+||.||||..+..           .+-|...++ |++|+++ ++++++|..+
T Consensus         1 ~~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~-L~~L~~~g~~l~i~TNq~   56 (161)
T d2fpwa1           1 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQ-LLKLQKAGYKLVMITNQD   56 (161)
T ss_dssp             CCEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHH-HHHHHHTTEEEEEEEECT
T ss_pred             CCcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHH-HHHHHHcCCceeeecccc
Confidence            479999999999987431           445788999 9999999 9999999654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=97.81  E-value=4.9e-06  Score=60.35  Aligned_cols=34  Identities=18%  Similarity=0.072  Sum_probs=28.6

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ..+. |+.|+++ +.++++||.....+...+..+++
T Consensus        80 ~~~~-l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~  114 (226)
T d2feaa1          80 FREF-VAFINEHEIPFYVISGGMDFFVYPLLEGIVE  114 (226)
T ss_dssp             HHHH-HHHHHHHTCCEEEEEEEEHHHHHHHHTTTSC
T ss_pred             HHHH-HHHHHhcccccccCCcchhhhHHHHHHHcCC
Confidence            5556 8888888 99999999999999988888754

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=8.2e-06  Score=57.95  Aligned_cols=45  Identities=20%  Similarity=0.328  Sum_probs=37.4

Q ss_pred             cceEEEEecCCCccCCCC--------CCCHHHHHHHHHhhCCC-eEEEEEcCCCH
Q psy16481          5 ANTICLFDVDGTLTQPRQ--------KAQNETLDFLLKKLKPL-SHLAIVSGSDM   50 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~--------~i~~~~~~~~l~~l~~~-i~~~iaTGR~~   50 (175)
                      ++++|+||+||||..+.+        ++-+...++ |++|+++ +.++++|..+-
T Consensus         1 ~~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~-l~~L~~~g~~~~ivTNq~~   54 (182)
T d2gmwa1           1 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDA-MRELKKMGFALVVVTNQSG   54 (182)
T ss_dssp             CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHH-HHHHHHTTCEEEEEEECTH
T ss_pred             CCCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHH-HHHHhhcCchhhhhhccch
Confidence            478999999999965332        456688999 9999999 99999998873

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.9e-05  Score=57.51  Aligned_cols=35  Identities=11%  Similarity=0.153  Sum_probs=29.3

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcc
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVL   63 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~   63 (175)
                      ..+. |+.|+++ ++++|+||-....+...++.+|++
T Consensus        87 ~~~~-i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~  122 (217)
T d1nnla_          87 IREL-VSRLQERNVQVFLISGGFRSIVEHVASKLNIP  122 (217)
T ss_dssp             HHHH-HHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred             HHHH-HHHHHhCCCEEEEECCCchHHHHHHHHHhCCc
Confidence            5666 8889998 999999999988888888777754

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.59  E-value=1.1e-05  Score=57.18  Aligned_cols=18  Identities=33%  Similarity=0.602  Sum_probs=16.1

Q ss_pred             CcceEEEEecCCCccCCC
Q psy16481          4 RANTICLFDVDGTLTQPR   21 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~   21 (175)
                      +++|+|+|||||||++++
T Consensus         2 ~kkKlv~FDlDGTL~d~e   19 (210)
T d1j97a_           2 KKKKLILFDFDSTLVNNE   19 (210)
T ss_dssp             CCCCEEEECCCCCCBSSC
T ss_pred             CCCeEEEEeCCCCcCCch
Confidence            578999999999999874

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.52  E-value=8.1e-06  Score=58.37  Aligned_cols=33  Identities=30%  Similarity=0.358  Sum_probs=23.8

Q ss_pred             CCcceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          3 CRANTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      |+++|.|+||+||||+++...+-....++ ++++
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~-~~~~   33 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYT-FKEL   33 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHH-HHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHH-HHHC
Confidence            67899999999999998765444444444 5544

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=97.52  E-value=1.6e-05  Score=57.98  Aligned_cols=44  Identities=14%  Similarity=0.150  Sum_probs=36.3

Q ss_pred             CCcceEEEEecCCCccCCCC--------CCCHHHHHHHHHhhCCC-eEEEEEcC
Q psy16481          3 CRANTICLFDVDGTLTQPRQ--------KAQNETLDFLLKKLKPL-SHLAIVSG   47 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~~~--------~i~~~~~~~~l~~l~~~-i~~~iaTG   47 (175)
                      +.++++|+||.||||..+.+        ++-|.+.++ |++|+++ +.++++|-
T Consensus        20 p~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~-L~~L~~~G~~l~IvTN   72 (209)
T d2o2xa1          20 PPHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPA-IATANRAGIPVVVVTN   72 (209)
T ss_dssp             CSSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHH-HHHHHHHTCCEEEEEE
T ss_pred             CCCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHH-HHHHHhhCCeEEEecc
Confidence            45678999999999965322        456788999 9999999 99999995

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.42  E-value=2.2e-05  Score=55.37  Aligned_cols=41  Identities=20%  Similarity=0.204  Sum_probs=28.3

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      ..+. |++|+++ +.++++|+++...+ +.+...++...++.++
T Consensus        84 v~~~-l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~  125 (187)
T d2fi1a1          84 VSDL-LEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVV  125 (187)
T ss_dssp             HHHH-HHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEE
T ss_pred             hHHH-HHHHHhhhccccccccCccchh-hhhhhhcccccccccc
Confidence            5566 8888888 99999999876544 4566665544444444

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.41  E-value=2.1e-05  Score=55.99  Aligned_cols=41  Identities=15%  Similarity=0.007  Sum_probs=28.1

Q ss_pred             HHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCcccccceEE
Q psy16481         28 TLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLEQFDFVF   70 (175)
Q Consensus        28 ~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i   70 (175)
                      ..+. |+.|+++ ++++++|+++.. ....+..+++...++.++
T Consensus        87 v~~~-L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~  128 (204)
T d2go7a1          87 AREV-LAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEIL  128 (204)
T ss_dssp             HHHH-HHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEE
T ss_pred             HHhh-hhcccccccchhhhcccchh-hhhhhhhccccccccccc
Confidence            5666 8888888 999999998754 444566555544454444

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.36  E-value=4e-05  Score=55.28  Aligned_cols=43  Identities=28%  Similarity=0.396  Sum_probs=34.8

Q ss_pred             CcceEEEEecCCCccCCCC-----------C-CCHHHHHHHHHhhCCC-eEEEEEcC
Q psy16481          4 RANTICLFDVDGTLTQPRQ-----------K-AQNETLDFLLKKLKPL-SHLAIVSG   47 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-----------~-i~~~~~~~~l~~l~~~-i~~~iaTG   47 (175)
                      .+.|.++||+||||.....           . +.+...++ |++|.++ +.++|+|-
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~-i~~L~~~gy~iiIvTN   74 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKK-LQELAAEGYKLVIFTN   74 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHH-HHHHHHHTCEEEEEEE
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHH-HHHHHhCCcEEEEecC
Confidence            3569999999999975321           1 46888999 9999998 99999994

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.29  E-value=0.00015  Score=52.38  Aligned_cols=44  Identities=25%  Similarity=0.400  Sum_probs=31.0

Q ss_pred             HHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhcCCCcccccceEEe
Q psy16481         27 ETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLGGEKVLEQFDFVFP   71 (175)
Q Consensus        27 ~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~~~~~~~~~~~~i~   71 (175)
                      ...++ |++|+++++++++|+.+...+...++..|+...++.+++
T Consensus       104 ~~~~~-L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~  147 (230)
T d1x42a1         104 EVVEV-LKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITT  147 (230)
T ss_dssp             THHHH-HHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred             cHHHH-HHHhhccCceeeeeccccccchhhhcccccccccccccc
Confidence            45556 777865589999999888887777776665444555554

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=97.24  E-value=7.5e-05  Score=52.90  Aligned_cols=57  Identities=21%  Similarity=0.204  Sum_probs=45.4

Q ss_pred             CCcceEEEEecCCCccCC------C----CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCC
Q psy16481          3 CRANTICLFDVDGTLTQP------R----QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGE   60 (175)
Q Consensus         3 ~~~~kli~~DlDGTLl~~------~----~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~   60 (175)
                      .+++|+++||+||+|++.      +    +.++...-.+ |+.|++. +.+++.||+...........+
T Consensus         2 ~~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~g-i~~l~~~gi~~~iis~~~~~~v~~~~~~l   69 (177)
T d1k1ea_           2 LENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLG-IKMLMDADIQVAVLSGRDSPILRRRIADL   69 (177)
T ss_dssp             GGGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHH-HHHHHHTTCEEEEEESCCCHHHHHHHHHH
T ss_pred             cccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHH-HHHHhhhcEEEEEecCCchhHHHHHHhhh
Confidence            367899999999999973      2    1355566678 9999988 999999999998887666554

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.0003  Score=50.49  Aligned_cols=34  Identities=12%  Similarity=0.178  Sum_probs=26.3

Q ss_pred             HHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCC
Q psy16481         27 ETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEK   61 (175)
Q Consensus        27 ~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~   61 (175)
                      .+.+. |++|+++ ++++++|+.+.......+...+
T Consensus       131 g~~e~-l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~  165 (253)
T d1zs9a1         131 DVVPA-VRKWREAGMKVYIYSSGSVEAQKLLFGHST  165 (253)
T ss_dssp             THHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHTBT
T ss_pred             CHHHH-HHHHhhccCceeecCCCcHHHHHHHHHHcC
Confidence            34566 7888888 9999999999887766666554

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.61  E-value=0.00095  Score=44.92  Aligned_cols=57  Identities=18%  Similarity=0.309  Sum_probs=48.4

Q ss_pred             cceEEEEecCCCccCCC-CCCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          5 ANTICLFDVDGTLTQPR-QKAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~-~~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+.+++|.+||++-.- .++-+...++ |+.|++. +.+.+.||............+|+
T Consensus         2 ~~~~~~~d~~~~~~~g~~D~lr~~a~~~-I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI   60 (135)
T d2b8ea1           2 KVTAVIFDKTGTLTKGKPDTLKESAKPA-VQELKRMGIKVGMITGDNWRSAEAISRELNL   60 (135)
T ss_dssp             HCCEEEEECCCCCBCSCCCCBCTTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred             eEEEEEECCceEEEEecCCCCCccHHHH-HHHHHHcCCEEEEEcCcchhhhhHHHhhhhh
Confidence            35789999999997753 4789999999 9999999 99999999999998777666543

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.45  E-value=0.00032  Score=50.07  Aligned_cols=17  Identities=29%  Similarity=0.554  Sum_probs=14.8

Q ss_pred             ceEEEEecCCCccCCCC
Q psy16481          6 NTICLFDVDGTLTQPRQ   22 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~   22 (175)
                      +|+|+||+||||+++..
T Consensus         2 ~kaviFD~DGtL~dt~~   18 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEI   18 (222)
T ss_dssp             CSEEEECSBTTTBCCHH
T ss_pred             ceEEEECCCCcccCCHH
Confidence            68999999999998644

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=96.43  E-value=0.0012  Score=48.02  Aligned_cols=18  Identities=17%  Similarity=0.089  Sum_probs=16.1

Q ss_pred             cceEEEEecCCCccCCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ   22 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~   22 (175)
                      ++|.|+||+||||++...
T Consensus         1 kIkaviFD~dGTL~d~~~   18 (257)
T d1swva_           1 KIEAVIFAWAGTTVDYGC   18 (257)
T ss_dssp             CCCEEEECSBTTTBSTTC
T ss_pred             CcEEEEEcCCCCeEeCcc
Confidence            589999999999999765

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=96.39  E-value=0.00027  Score=50.39  Aligned_cols=30  Identities=20%  Similarity=0.305  Sum_probs=19.3

Q ss_pred             ceEEEEecCCCccCCCCCCCHHHHHHHHHhh
Q psy16481          6 NTICLFDVDGTLTQPRQKAQNETLDFLLKKL   36 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~~~i~~~~~~~~l~~l   36 (175)
                      +|.|+||+||||+++....-+...++ ++++
T Consensus         2 ikaiiFD~DGTL~ds~~~~~~a~~~~-~~~~   31 (221)
T d1o08a_           2 FKAVLFDLDGVITDTAEYHFRAWKAL-AEEI   31 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHH-HHHT
T ss_pred             CcEEEEcCCCCeEcCHHHHHHHHHHH-HHHc
Confidence            68999999999998543222233334 5444

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=96.00  E-value=0.00091  Score=47.34  Aligned_cols=17  Identities=29%  Similarity=0.190  Sum_probs=14.7

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      ++|+|.||+||||++..
T Consensus         1 ~IKaIiFD~dGTL~d~~   17 (220)
T d1zrna_           1 YIKGIAFDLYGTLFDVH   17 (220)
T ss_dssp             CCCEEEECSBTTTEETH
T ss_pred             CCEEEEECCCCCcEeCH
Confidence            58999999999999743

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.99  E-value=0.0028  Score=48.00  Aligned_cols=38  Identities=18%  Similarity=0.146  Sum_probs=28.7

Q ss_pred             CCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481         24 AQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus        24 i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      +.+...+. ++.|+++ +.++|+||.--.-+...++.+++
T Consensus       136 Lr~G~~e~-~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~  174 (291)
T d2bdua1         136 LKEGYENF-FGKLQQHGIPVFIFSAGIGDVLEEVIRQAGV  174 (291)
T ss_dssp             BCBTHHHH-HHHHHHHTCCEEEEEEEEHHHHHHHHHHTTC
T ss_pred             cccCHHHH-HHHHHHcCCeEEEEcCChHHHHHHHHHHcCC
Confidence            34455555 7777777 99999999988888888877654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.66  E-value=0.0016  Score=45.66  Aligned_cols=17  Identities=35%  Similarity=0.661  Sum_probs=14.9

Q ss_pred             cceEEEEecCCCccCCC
Q psy16481          5 ANTICLFDVDGTLTQPR   21 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~   21 (175)
                      ++|.|+||+||||+++.
T Consensus         1 tIk~vlFD~dGtL~~~~   17 (225)
T d1zd3a1           1 TLRAAVFDLDGVLALPA   17 (225)
T ss_dssp             CCCEEEECTBTTTEESC
T ss_pred             CcEEEEEcCCCCeecCH
Confidence            47999999999999754

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=95.66  E-value=0.002  Score=46.22  Aligned_cols=16  Identities=31%  Similarity=0.393  Sum_probs=14.1

Q ss_pred             ceEEEEecCCCccCCC
Q psy16481          6 NTICLFDVDGTLTQPR   21 (175)
Q Consensus         6 ~kli~~DlDGTLl~~~   21 (175)
                      +|.|+||+||||++..
T Consensus         2 IKaviFD~dGTL~d~~   17 (245)
T d1qq5a_           2 IKAVVFDAYGTLFDVQ   17 (245)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             CeEEEEeCCCCcEeCH
Confidence            6999999999999753

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.57  E-value=0.0015  Score=46.07  Aligned_cols=15  Identities=40%  Similarity=0.831  Sum_probs=13.3

Q ss_pred             eEEEEecCCCccCCC
Q psy16481          7 TICLFDVDGTLTQPR   21 (175)
Q Consensus         7 kli~~DlDGTLl~~~   21 (175)
                      |+|+||+||||+++.
T Consensus         1 r~v~FDlDGtL~~~~   15 (222)
T d1cr6a1           1 RVAAFDLDGVLALPS   15 (222)
T ss_dssp             CEEEECGGGTTEESC
T ss_pred             CEEEEcCCCceECCH
Confidence            789999999999853

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.42  E-value=0.0026  Score=44.67  Aligned_cols=16  Identities=25%  Similarity=0.476  Sum_probs=14.6

Q ss_pred             cceEEEEecCCCccCC
Q psy16481          5 ANTICLFDVDGTLTQP   20 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~   20 (175)
                      +++.|.||+||||++.
T Consensus         2 ~~~~~lfD~dGTl~d~   17 (225)
T d2g80a1           2 NYSTYLLDIEGTVCPI   17 (225)
T ss_dssp             CCSEEEECCBTTTBCT
T ss_pred             CCCEEEEcCCCCCccc
Confidence            6789999999999985

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.35  E-value=0.0093  Score=41.28  Aligned_cols=54  Identities=13%  Similarity=0.193  Sum_probs=45.0

Q ss_pred             EEEEecCCCccCCCC-CCCHHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCc
Q psy16481          8 ICLFDVDGTLTQPRQ-KAQNETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKV   62 (175)
Q Consensus         8 li~~DlDGTLl~~~~-~i~~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~   62 (175)
                      ++++|.+|||+-..- ++-+.+.++ |+.|++. +++.++||-............|+
T Consensus         4 ~~~~d~~~~~~~~~~Dp~R~~~~~~-I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi   59 (168)
T d1wpga2           4 VICSDKTGTLTTNQLDPPRKEVMGS-IQLCRDAGIRVIMITGDNKGTAIAICRRIGI   59 (168)
T ss_dssp             EEEECCTTTTBCCCECCBCTTHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHTTS
T ss_pred             EEEECCccEEEEEecCCCchhHHHH-HHHHHHCcCEEEEECCCCHHHHHHHHHHcCC
Confidence            678899999987653 566789999 9999999 99999999999987766666554

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=95.26  E-value=0.003  Score=45.47  Aligned_cols=46  Identities=13%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             cceEEEEecCCCccCCCC----------------------------------CCCHHHHHHHHHhhCCC-eEEEEEcCCC
Q psy16481          5 ANTICLFDVDGTLTQPRQ----------------------------------KAQNETLDFLLKKLKPL-SHLAIVSGSD   49 (175)
Q Consensus         5 ~~kli~~DlDGTLl~~~~----------------------------------~i~~~~~~~~l~~l~~~-i~~~iaTGR~   49 (175)
                      +...|.||+|-|+|++..                                  ..-+..++. ++.++++ +.++++|||+
T Consensus        34 ~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~f-l~~~~~~Gv~IfyVTnR~  112 (209)
T d2b82a1          34 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQL-IDMHVRRGDAIFFVTGRS  112 (209)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHH-HHHHHHHTCEEEEEECSC
T ss_pred             CCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHH-HHHHHHcCCeEEEEeCCc
Confidence            335899999999999521                                  012357777 9999999 9999999998


Q ss_pred             HH
Q psy16481         50 MN   51 (175)
Q Consensus        50 ~~   51 (175)
                      ..
T Consensus       113 ~~  114 (209)
T d2b82a1         113 PT  114 (209)
T ss_dssp             CC
T ss_pred             hh
Confidence            65

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0066  Score=42.51  Aligned_cols=54  Identities=15%  Similarity=0.179  Sum_probs=38.3

Q ss_pred             CcceEEEEecCCCccCCCC-----------------------CCCHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHhc
Q psy16481          4 RANTICLFDVDGTLTQPRQ-----------------------KAQNETLDFLLKKLKPLSHLAIVSGSDMNKVAEQLG   58 (175)
Q Consensus         4 ~~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~~~l~~l~~~i~~~iaTGR~~~~~~~~~~   58 (175)
                      ++++.+++||||||+.+..                       ..=|...+. |+.+.+...++|-|.-+..-+...+.
T Consensus        13 ~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eF-L~~l~~~yei~I~Ta~~~~YA~~il~   89 (181)
T d1ta0a_          13 SDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEF-LQRMGELFECVLFTASLAKYADPVAD   89 (181)
T ss_dssp             TTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHH-HHHHHHHSEEEEECSSCHHHHHHHHH
T ss_pred             CCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHH-HHHHHhceEEEEEcCCcHHHHHHHHH
Confidence            3568899999999996321                       125667777 99998777777778777765554443

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.0079  Score=40.76  Aligned_cols=14  Identities=14%  Similarity=0.475  Sum_probs=11.8

Q ss_pred             EEEEecCCCccCCC
Q psy16481          8 ICLFDVDGTLTQPR   21 (175)
Q Consensus         8 li~~DlDGTLl~~~   21 (175)
                      |++||+||||++++
T Consensus         2 l~iFDlDgtL~d~~   15 (197)
T d2b0ca1           2 LYIFDLGNVIVDID   15 (197)
T ss_dssp             EEEECCBTTTEEEE
T ss_pred             EEEEeCCCCcCcCH
Confidence            56799999999864

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.021  Score=39.76  Aligned_cols=15  Identities=33%  Similarity=0.603  Sum_probs=12.7

Q ss_pred             ceE-EEEecCCCccCC
Q psy16481          6 NTI-CLFDVDGTLTQP   20 (175)
Q Consensus         6 ~kl-i~~DlDGTLl~~   20 (175)
                      ++| |++||||||++.
T Consensus         2 ~~mrI~iDmDGVL~Df   17 (195)
T d1q92a_           2 RALRVLVDMDGVLADF   17 (195)
T ss_dssp             CCEEEEECSBTTTBCH
T ss_pred             CccEEEEECCCccccC
Confidence            456 899999999984

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=85.76  E-value=0.27  Score=37.77  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=32.2

Q ss_pred             HHHHHHHHHhhCCC-eEEEEEcCCCHHHHHHHhcCCCccc
Q psy16481         26 NETLDFLLKKLKPL-SHLAIVSGSDMNKVAEQLGGEKVLE   64 (175)
Q Consensus        26 ~~~~~~~l~~l~~~-i~~~iaTGR~~~~~~~~~~~~~~~~   64 (175)
                      ++..++ |++|+++ ++++++||++...+...++.+|+..
T Consensus       218 ~~v~~~-l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~  256 (380)
T d1qyia_         218 DEVKVL-LNDLKGAGFELGIATGRPYTETVVPFENLGLLP  256 (380)
T ss_dssp             HHHHHH-HHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred             hhHHHH-HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcc
Confidence            477788 9999999 9999999999999887777766543