Psyllid ID: psy16529

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90----
Protein Sequence
VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHccccccHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHccccccccccccccHHHHHHHHcc
Coil and Loop (DISEMBL)
VKAEKTHNALIEGVEAFDTAKLKHaetqeknplpdkdgtkkkpiskctsyedkKSKEKLISGIenfdtgklkhtetveknplptkeaiDLEKKA
Flexible Loop (DISEMBL)
vkaekthnaliegveafdtAKLKHaetqeknplpdkdgtkkkpiskctsyedkkskeklisgienfdtgklkhtetveknplptkeaidlekka
Low Complexity Region (SEG)
VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA
Disordered region (IsUnstruct)
**********************************************************************************************
Disordered Region (DISOPRED)
*********************************************************************************LPTK*********
Disordered Region (DISEMBL)
********ALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA
Disordered Region (DISPRO)
***********EGVEAFDTAKLKHAE**EKNPLPDKD*TKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKH*****KNPLPTKEAIDLEKK*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	94	2.2.26 [Sep-21-2011]
P26352	43	Thymosin beta-12 OS=Oncor	N/A	N/A	0.372	0.813	0.628	0.0001
P62329	44	Thymosin beta-4 OS=Rattus	yes	N/A	0.372	0.795	0.628	0.0002
P34032	44	Thymosin beta-4 OS=Orycto	yes	N/A	0.372	0.795	0.628	0.0002
Q5R7H8	44	Thymosin beta-4 OS=Pongo	yes	N/A	0.372	0.795	0.628	0.0002
Q95274	44	Thymosin beta-4 OS=Sus sc	yes	N/A	0.372	0.795	0.628	0.0002
P62328	44	Thymosin beta-4 OS=Homo s	yes	N/A	0.372	0.795	0.628	0.0002
P62327	44	Thymosin beta-4 OS=Equus	yes	N/A	0.372	0.795	0.628	0.0002
Q6S9C5	44	Thymosin beta-4 OS=Chinch	N/A	N/A	0.372	0.795	0.628	0.0002
P62326	44	Thymosin beta-4 OS=Bos ta	yes	N/A	0.372	0.795	0.628	0.0002
P20065	50	Thymosin beta-4 OS=Mus mu	no	N/A	0.372	0.7	0.628	0.0002

>sp|P26352|TYB12_ONCMY Thymosin beta-12 OS=Oncorhynchus mykiss PE=1 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ + NFD  KLK TET EKNPLPTKE I+ EK+A
Sbjct: 7  LAEVSNFDKTKLKKTETQEKNPLPTKETIEQEKQA 41

Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization.
Oncorhynchus mykiss (taxid: 8022)

>sp|P62329|TYB4_RAT Thymosin beta-4 OS=Rattus norvegicus GN=Tmsb4x PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Rattus norvegicus (taxid: 10116)

>sp|P34032|TYB4_RABIT Thymosin beta-4 OS=Oryctolagus cuniculus GN=TMSB4 PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Oryctolagus cuniculus (taxid: 9986)

>sp|Q5R7H8|TYB4_PONAB Thymosin beta-4 OS=Pongo abelii GN=TMSB4X PE=3 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Pongo abelii (taxid: 9601)

>sp|Q95274|TYB4_PIG Thymosin beta-4 OS=Sus scrofa GN=TMSB4 PE=2 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Sus scrofa (taxid: 9823)

>sp|P62328|TYB4_HUMAN Thymosin beta-4 OS=Homo sapiens GN=TMSB4X PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Homo sapiens (taxid: 9606)

>sp|P62327|TYB4_HORSE Thymosin beta-4 OS=Equus caballus GN=TMSB4 PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Equus caballus (taxid: 9796)

>sp|Q6S9C5|TYB4_CHILA Thymosin beta-4 OS=Chinchilla lanigera GN=TMSB4 PE=3 SV=3

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Chinchilla lanigera (taxid: 34839)

>sp|P62326|TYB4_BOVIN Thymosin beta-4 OS=Bos taurus GN=TMSB4 PE=1 SV=2

 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 7  MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Bos taurus (taxid: 9913)

>sp|P20065|TYB4_MOUSE Thymosin beta-4 OS=Mus musculus GN=Tmsb4x PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 27/35 (77%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          ++ IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 13 MAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 47

Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
301016773	164	HsjCib isoform4 [Hodotermopsis sjoestedt	0.882	0.506	0.680	4e-25
301016771	126	Hsjcib isoform5 [Hodotermopsis sjoestedt	0.882	0.658	0.680	8e-25
301016779	202	HsjCib isoform1 [Hodotermopsis sjoestedt	1.0	0.465	0.553	5e-24
301016777	164	HsjCib isoform2 [Hodotermopsis sjoestedt	1.0	0.573	0.553	9e-24
307212756	166	Thymosin beta-4 [Harpegnathos saltator]	0.882	0.5	0.638	3e-23
307189411	166	Thymosin beta-4 [Camponotus floridanus]	0.882	0.5	0.627	1e-22
383849874	166	PREDICTED: uncharacterized protein LOC10	0.882	0.5	0.606	6e-22
91077294	131	PREDICTED: similar to thymosin beta isof	0.882	0.633	0.627	6e-22
149689076	169	thymosin beta [Triatoma infestans]	1.0	0.556	0.520	7e-22
332375695	174	unknown [Dendroctonus ponderosae]	0.882	0.477	0.617	2e-21

>gi|301016773|dbj|BAJ11762.1| HsjCib isoform4 [Hodotermopsis sjoestedti]

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V  EKT  AL++GVEAFDT KLKH ETQEKNPLPDKD           + E +K K+ LI
Sbjct: 82  VATEKTQKALLQGVEAFDTGKLKHTETQEKNPLPDKD-----------AIEQEKEKQNLI 130

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           +GIENFDT KLKHTET EKNPLPTKEAID EKKA
Sbjct: 131 AGIENFDTKKLKHTETQEKNPLPTKEAIDEEKKA 164

Source: Hodotermopsis sjoestedti

Species: Hodotermopsis sjostedti

Genus: Hodotermopsis

Family: Termopsidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301016771|dbj|BAJ11763.1| Hsjcib isoform5 [Hodotermopsis sjoestedti]

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/94 (68%), Positives = 70/94 (74%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V  EKT  AL++GVEAFDT KLKH ETQEKNPLPDKD           + E +K K+ LI
Sbjct: 44  VATEKTQKALLQGVEAFDTGKLKHTETQEKNPLPDKD-----------AIEQEKEKQNLI 92

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           +GIENFDT KLKHTET EKNPLPTKEAID EKKA
Sbjct: 93  AGIENFDTKKLKHTETQEKNPLPTKEAIDEEKKA 126

Source: Hodotermopsis sjoestedti

Species: Hodotermopsis sjostedti

Genus: Hodotermopsis

Family: Termopsidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301016779|dbj|BAJ11759.1| HsjCib isoform1 [Hodotermopsis sjoestedti]

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 74/121 (61%), Gaps = 27/121 (22%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTK-------------------- 40
           V  EKT  AL++GVEAFDT KLKH ETQEKNPLPDKD  K                    
Sbjct: 82  VATEKTQKALLQGVEAFDTGKLKHTETQEKNPLPDKDVVKQEKVHQNLLEGVEHFDKATM 141

Query: 41  -------KKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKK 93
                  K P+    + E +K K+ LI+GIENFDT KLKHTET EKNPLPTKEAID EKK
Sbjct: 142 KPTQTQEKNPLPDPEAIEQEKEKQNLIAGIENFDTKKLKHTETQEKNPLPTKEAIDEEKK 201

Query: 94  A 94
           A
Sbjct: 202 A 202

Source: Hodotermopsis sjoestedti

Species: Hodotermopsis sjostedti

Genus: Hodotermopsis

Family: Termopsidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|301016777|dbj|BAJ11760.1| HsjCib isoform2 [Hodotermopsis sjoestedti]

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 74/121 (61%), Gaps = 27/121 (22%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTK-------------------- 40
           V  EKT  AL++GVEAFDT KLKH ETQEKNPLPDKD  K                    
Sbjct: 44  VATEKTQKALLQGVEAFDTGKLKHTETQEKNPLPDKDVVKQEKVHQNLLEGVEHFDKATM 103

Query: 41  -------KKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKK 93
                  K P+    + E +K K+ LI+GIENFDT KLKHTET EKNPLPTKEAID EKK
Sbjct: 104 KPTQTQEKNPLPDPEAIEQEKEKQNLIAGIENFDTKKLKHTETQEKNPLPTKEAIDEEKK 163

Query: 94  A 94
           A
Sbjct: 164 A 164

Source: Hodotermopsis sjoestedti

Species: Hodotermopsis sjostedti

Genus: Hodotermopsis

Family: Termopsidae

Order: Isoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212756|gb|EFN88427.1| Thymosin beta-4 [Harpegnathos saltator]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/94 (63%), Positives = 67/94 (71%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V AEKT   LI G+E FDTA LKH ETQEKNPLPDKD  +++           K K++LI
Sbjct: 83  VAAEKTQQTLIAGIEKFDTASLKHTETQEKNPLPDKDAIQQE-----------KGKQQLI 131

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           SGIENFD  KLKH ET+EKNPLPTKEAID EK A
Sbjct: 132 SGIENFDPAKLKHAETLEKNPLPTKEAIDAEKIA 165

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189411|gb|EFN73821.1| Thymosin beta-4 [Camponotus floridanus]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 66/94 (70%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V AEKT   LI G+E FDTA LKH ETQEKNPLPDKD  +++           K K++LI
Sbjct: 83  VAAEKTQQTLIAGIEKFDTASLKHTETQEKNPLPDKDAIQQE-----------KGKQQLI 131

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           SGIENFD  KLKH ET+EKNPLPTKE ID EK A
Sbjct: 132 SGIENFDPAKLKHAETLEKNPLPTKETIDAEKIA 165

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383849874|ref|XP_003700559.1| PREDICTED: uncharacterized protein LOC100881997 [Megachile rotundata]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 57/94 (60%), Positives = 65/94 (69%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V AEKT   L+ G+E FD   LKH ETQEKNPLPDKD  +++           K K++LI
Sbjct: 83  VAAEKTQQTLMSGIETFDPTSLKHTETQEKNPLPDKDAIQQE-----------KGKQQLI 131

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           SGIENFD  KLKH ET+EKNPLPTKEAID EK A
Sbjct: 132 SGIENFDPAKLKHAETLEKNPLPTKEAIDAEKIA 165

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077294|ref|XP_968496.1| PREDICTED: similar to thymosin beta isoform 1 [Tribolium castaneum]

 Score =  108 bits (269), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/94 (62%), Positives = 65/94 (69%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           V AEKT  ALI G+E FD +KLKH ETQEKNPLPDKD             E +K + +LI
Sbjct: 49  VAAEKTEKALIAGIEHFDPSKLKHTETQEKNPLPDKD-----------VIEQEKGQRQLI 97

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           SGIENFD+ KLKH ET EKNPLPTKE ID EK A
Sbjct: 98  SGIENFDSSKLKHAETCEKNPLPTKEIIDQEKSA 131

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|149689076|gb|ABR27867.1| thymosin beta [Triatoma infestans]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 73/121 (60%), Gaps = 27/121 (22%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCT------------ 48
           V  EKT  AL+EGVEAFDT KLKH ETQEKNPLPDKD   ++ + +              
Sbjct: 49  VATEKTQKALLEGVEAFDTGKLKHTETQEKNPLPDKDAVLQEKVHQNLISGVEGFDKASM 108

Query: 49  ---------------SYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKK 93
                          + E +K ++KLI+GIENFD  KLKHTET EKNPLPTKEAID EK 
Sbjct: 109 KHTQTQEKNILPDPEAIEAEKGQQKLIAGIENFDHKKLKHTETQEKNPLPTKEAIDQEKS 168

Query: 94  A 94
           A
Sbjct: 169 A 169

Source: Triatoma infestans

Species: Triatoma infestans

Genus: Triatoma

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332375695|gb|AEE62988.1| unknown [Dendroctonus ponderosae]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/94 (61%), Positives = 65/94 (69%), Gaps = 11/94 (11%)

Query: 1   VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
           + AEKT  ALIEG+  FD AKLKH ETQEKNPLPDKD             E +K++  L+
Sbjct: 92  LAAEKTEKALIEGIAKFDPAKLKHTETQEKNPLPDKD-----------VIEQEKAQSNLL 140

Query: 61  SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
           SGIENFD+ KLKH ET EKNPLPTKE ID EK A
Sbjct: 141 SGIENFDSTKLKHAETQEKNPLPTKEVIDQEKSA 174

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	94
FB|FBgn0026084	129	cib "ciboulot" [Drosophila mel	0.882	0.643	0.542	4.4e-20
UNIPROTKB|J9NSU4	42	J9NSU4 "Uncharacterized protei	0.340	0.761	0.718	6.1e-07
WB|WBGene00006649	151	tth-1 [Caenorhabditis elegans	0.861	0.536	0.369	7.8e-07
UNIPROTKB|G8JKW3	44	G8JKW3 "Uncharacterized protei	0.340	0.727	0.687	1.3e-06
UNIPROTKB|G8JKY5	62	TMSB4 "Hematopoietic system re	0.340	0.516	0.687	1.6e-06
UNIPROTKB|G8JL04	50	G8JL04 "Uncharacterized protei	0.340	0.64	0.687	1.6e-06
UNIPROTKB|P62326	44	TMSB4 "Thymosin beta-4" [Bos t	0.340	0.727	0.687	1.6e-06
UNIPROTKB|J9P127	44	TMSB4Y "Uncharacterized protei	0.340	0.727	0.687	1.6e-06
UNIPROTKB|P62328	44	TMSB4X "Thymosin beta-4" [Homo	0.340	0.727	0.687	1.6e-06
UNIPROTKB|Q95274	44	TMSB4 "Thymosin beta-4" [Sus s	0.340	0.727	0.687	1.6e-06

FB|FBgn0026084 cib "ciboulot" [Drosophila melanogaster (taxid:7227)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 51/94 (54%), Positives = 62/94 (65%)

Query:     1 VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
             V AEKT  ++ EG+ AF+   LKH ET EKNPLPDK+           + E +K K + I
Sbjct:    47 VAAEKTQQSIFEGITAFNQNNLKHTETNEKNPLPDKE-----------AIEQEKEKNQFI 95

Query:    61 SGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             +GIENFD  KLKHTET EKN LPTKE I+ EK+A
Sbjct:    96 AGIENFDAKKLKHTETNEKNVLPTKEVIEAEKQA 129

GO:0007420 "brain development" evidence=IMP

GO:0003785 "actin monomer binding" evidence=IDA

GO:0035193 "larval central nervous system remodeling" evidence=IMP

GO:0003779 "actin binding" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0007010 "cytoskeleton organization" evidence=IEA

UNIPROTKB|J9NSU4 J9NSU4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KEAI+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKEAIEQEKQA 41

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

WB|WBGene00006649 tth-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 34/92 (36%), Positives = 44/92 (47%)

Query:     1 VKAEKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLI 60
             V  EK H   I  +E FD+ KL     +EK  LP  D  K          ++K+  E L 
Sbjct:    41 VAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIK----------QEKQHLE-LT 89

Query:    61 SGIENFDTGKLKHTETVEKNPLPTKEAIDLEK 92
               I NF +  LK TET+EKN LP+   +  EK
Sbjct:    90 DKINNFPSENLKKTETIEKNVLPSPTDVAREK 121

GO:0003779 "actin binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007010 "cytoskeleton organization" evidence=IEA

UNIPROTKB|G8JKW3 G8JKW3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 22/32 (68%), Positives = 26/32 (81%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE+I+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKESIEQEKQA 41

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|G8JKY5 TMSB4 "Hematopoietic system regulatory peptide" [Bos taurus (taxid:9913)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    28 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 59

GO:0030334 "regulation of cell migration" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|G8JL04 G8JL04 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    16 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 47

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|P62326 TMSB4 "Thymosin beta-4" [Bos taurus (taxid:9913)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

GO:0030334 "regulation of cell migration" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005856 "cytoskeleton" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

UNIPROTKB|J9P127 TMSB4Y "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

UNIPROTKB|P62328 TMSB4X "Thymosin beta-4" [Homo sapiens (taxid:9606)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0002576 "platelet degranulation" evidence=TAS

GO:0005576 "extracellular region" evidence=TAS

GO:0007596 "blood coagulation" evidence=TAS

GO:0030168 "platelet activation" evidence=TAS

GO:0031093 "platelet alpha granule lumen" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q95274 TMSB4 "Thymosin beta-4" [Sus scrofa (taxid:9823)]

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query:    63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
             IE FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct:    10 IEKFDKSKLKKTETQEKNPLPSKETIEQEKQA 41

GO:0030334 "regulation of cell migration" evidence=ISS

GO:0005829 "cytosol" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005856 "cytoskeleton" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0042989 "sequestering of actin monomers" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34032	TYB4_RABIT	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
P62327	TYB4_HORSE	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
P62326	TYB4_BOVIN	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
Q95274	TYB4_PIG	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
Q5R7H8	TYB4_PONAB	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
P62329	TYB4_RAT	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A
P62328	TYB4_HUMAN	No assigned EC number	0.6285	0.3723	0.7954	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	94
pfam01290	41	pfam01290, Thymosin, Thymosin beta-4 family	7e-06
smart00152	37	smart00152, THY, Thymosin beta actin-binding motif	0.003

>gnl|CDD|144768 pfam01290, Thymosin, Thymosin beta-4 family

 Score = 39.2 bits (92), Expect = 7e-06
 Identities = 21/32 (65%), Positives = 23/32 (71%)

Query: 63 IENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          +E FD  KLK TET EKN LPTKE I+ EK A
Sbjct: 9  VEGFDKSKLKKTETQEKNTLPTKEDIEQEKTA 40

Length = 41

>gnl|CDD|128457 smart00152, THY, Thymosin beta actin-binding motif

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 20/35 (57%), Positives = 26/35 (74%)

Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          I  IE+FD+  LK TET+EKN LP+KE I+ EK+ 
Sbjct: 1  IDEIEHFDSENLKKTETIEKNVLPSKEDIEQEKQH 35

Length = 37

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	94
KOG4794|consensus	114		99.83
smart00152	37	THY Thymosin beta actin-binding motif.	99.75
smart00152	37	THY Thymosin beta actin-binding motif.	99.7
PF01290	41	Thymosin: Thymosin beta-4 family; InterPro: IPR001	99.65
PF01290	41	Thymosin: Thymosin beta-4 family; InterPro: IPR001	99.61
KOG4794|consensus	114		99.3

>KOG4794|consensus

Probab=99.83  E-value=1.1e-21  Score=139.43  Aligned_cols=71  Identities=48%  Similarity=0.640  Sum_probs=66.2

Q ss_pred             HhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHHHhhhhccccCCCCCcccccccCCCCCCHHHHH
Q psy16529         10 LIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAID   89 (94)
Q Consensus        10 ~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie   89 (94)
                      .+.+++.||..+|.++.|+++++||++++           |.++|.   .+++|.+||.++||||||+|||+|||+|+|+
T Consensus        40 R~~~~~~~~~~~~~~t~t~~k~~~~d~k~-----------I~~~kp---~~~~~~k~~~sklKkTet~EKN~Lpsketie  105 (114)
T KOG4794|consen   40 RIHEIEHFDSTKLHSTPTKEKIVLPDAKD-----------IMQDKP---DLQEIEKFDNSKLKKTETQEKNVLPSKETIE  105 (114)
T ss_pred             ccCcccccCccccccccccccccCCChhh-----------HhhcCC---chHHHHHhhHhhcccccccccCCCCCHHHHH
Confidence            46789999999999999999999999998           988764   7889999999999999999999999999999


Q ss_pred             HHhhC
Q psy16529         90 LEKKA   94 (94)
Q Consensus        90 ~EK~a   94 (94)
                      |||++
T Consensus       106 qEK~~  110 (114)
T KOG4794|consen  106 QEKQA  110 (114)
T ss_pred             HHhhc
Confidence            99985

>smart00152 THY Thymosin beta actin-binding motif

Probab=99.75  E-value=4.2e-19  Score=105.48  Aligned_cols=35  Identities=57%  Similarity=0.821  Sum_probs=33.4

Q ss_pred             hhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        60 ~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      +++|++||+++||||+|+|||||||+|+|+|||++
T Consensus         1 ~~~ie~Fdk~kLKkteT~EKn~LPtkE~IeqEK~~   35 (37)
T smart00152        1 IDEIEHFDSENLKKTETIEKNVLPSKEDIEQEKQH   35 (37)
T ss_pred             CchhhhcchhhcccccccccCCCCCHHHHHHHHhh
Confidence            57999999999999999999999999999999975

>smart00152 THY Thymosin beta actin-binding motif

Probab=99.70  E-value=3.6e-18  Score=101.49  Aligned_cols=36  Identities=44%  Similarity=0.662  Sum_probs=34.1

Q ss_pred             hhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529         11 IEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus        11 ~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      +++|++||+++||||+|+|||||||+|+           |+|||+++
T Consensus         1 ~~~ie~Fdk~kLKkteT~EKn~LPtkE~-----------IeqEK~~~   36 (37)
T smart00152        1 IDEIEHFDSENLKKTETIEKNVLPSKED-----------IEQEKQHL   36 (37)
T ss_pred             CchhhhcchhhcccccccccCCCCCHHH-----------HHHHHhhc
Confidence            5799999999999999999999999999           99999865

>PF01290 Thymosin: Thymosin beta-4 family; InterPro: IPR001152 Thymosin beta-4 is a small polypeptide whose exact physiological role is not yet known []

Probab=99.65  E-value=7.3e-18  Score=101.73  Aligned_cols=40  Identities=45%  Similarity=0.669  Sum_probs=36.1

Q ss_pred             hhhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529          7 HNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus         7 ~~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      +++++++|++||+++||||+|+|||+|||+|+           |++||+++
T Consensus         2 d~p~~~eie~Fdk~kLK~~eT~EKn~LPs~e~-----------I~~EK~~~   41 (41)
T PF01290_consen    2 DKPDMAEIEKFDKSKLKHTETQEKNVLPSKED-----------IEQEKQAK   41 (41)
T ss_dssp             --HHHHHHHHHHGGGSBHHHHEEHHHSSSCHH-----------HHHHHHH-
T ss_pred             CCcchHHHhccChhhcccccccccCCCCCHHH-----------HHHHHhcC
Confidence            67899999999999999999999999999999           99999864

It was first isolated as a thymic hormone that induces terminal deoxynucleotidyltransferase. It is found in high quantity in thymus and spleen but is widely distributed in many tissues. It has also been shown to bind to actin monomers and thus to inhibit actin polymerisation []. A number of peptides closely related to thymosin beta-4 belong to this family. They include, thymosin beta-9 (and beta-8) in Bos taurus (Bovine) and Sus scrofa (Pig), thymosin beta-10 in Homo sapiens (Human) and Rattus norvegicus (Rat), thymosin beta-11 and beta-12 in Oncorhynchus mykiss (Rainbow trout) and human Nb thymosin beta.; GO: 0003779 actin binding, 0007010 cytoskeleton organization, 0005737 cytoplasm; PDB: 1T44_G 1HJ0_A 3U9Z_C 3U9D_D 1SQK_B 3U8X_D 3SJH_B 2FF6_H.

>PF01290 Thymosin: Thymosin beta-4 family; InterPro: IPR001152 Thymosin beta-4 is a small polypeptide whose exact physiological role is not yet known []

Probab=99.61  E-value=1.6e-17  Score=100.25  Aligned_cols=38  Identities=58%  Similarity=0.769  Sum_probs=35.2

Q ss_pred             HHhhhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         57 EKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        57 ~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      .+.|++|++||+++|||++|+|||+|||+|+|++||++
T Consensus         3 ~p~~~eie~Fdk~kLK~~eT~EKn~LPs~e~I~~EK~~   40 (41)
T PF01290_consen    3 KPDMAEIEKFDKSKLKHTETQEKNVLPSKEDIEQEKQA   40 (41)
T ss_dssp             -HHHHHHHHHHGGGSBHHHHEEHHHSSSCHHHHHHHHH
T ss_pred             CcchHHHhccChhhcccccccccCCCCCHHHHHHHHhc
Confidence            46789999999999999999999999999999999974

It was first isolated as a thymic hormone that induces terminal deoxynucleotidyltransferase. It is found in high quantity in thymus and spleen but is widely distributed in many tissues. It has also been shown to bind to actin monomers and thus to inhibit actin polymerisation []. A number of peptides closely related to thymosin beta-4 belong to this family. They include, thymosin beta-9 (and beta-8) in Bos taurus (Bovine) and Sus scrofa (Pig), thymosin beta-10 in Homo sapiens (Human) and Rattus norvegicus (Rat), thymosin beta-11 and beta-12 in Oncorhynchus mykiss (Rainbow trout) and human Nb thymosin beta.; GO: 0003779 actin binding, 0007010 cytoskeleton organization, 0005737 cytoplasm; PDB: 1T44_G 1HJ0_A 3U9Z_C 3U9D_D 1SQK_B 3U8X_D 3SJH_B 2FF6_H.

>KOG4794|consensus

Probab=99.30  E-value=4.1e-13  Score=95.81  Aligned_cols=41  Identities=41%  Similarity=0.623  Sum_probs=37.8

Q ss_pred             chhhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529          6 THNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus         6 ~~~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      .+++.++++.+||.|+||||||+|||+|||+|+           |+|||+..
T Consensus        71 ~~kp~~~~~~k~~~sklKkTet~EKN~Lpsket-----------ieqEK~~~  111 (114)
T KOG4794|consen   71 QDKPDLQEIEKFDNSKLKKTETQEKNVLPSKET-----------IEQEKQAQ  111 (114)
T ss_pred             hcCCchHHHHHhhHhhcccccccccCCCCCHHH-----------HHHHhhcc
Confidence            456889999999999999999999999999999           99999764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	94
3u9d_B	54	Crystal Structure Of A Chimera Containing The N-Ter		8e-06
3sjh_B	54	Crystal Structure Of A Chimera Containing The N-Ter		3e-05
1hj0_A	41	Thymosin Beta9 Length = 41		3e-04

>pdb|3U9D|B Chain B, Crystal Structure Of A Chimera Containing The N-Terminal Domain (Residues 8-24) Of Drosophila Ciboulot And The C-Terminal Domain (Residues 13-44) Of Bovine Thymosin-Beta4, Bound To G-Actin-Atp Length = 54

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 29/41 (70%)
Query: 54 KSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          K  E L S +E FD  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 11 KVAENLKSQLEGFDKSKLKKTETQEKNPLPSKETIEQEKQA 51

>pdb|3SJH|B Chain B, Crystal Structure Of A Chimera Containing The N-Terminal Domain (Residues 8-29) Of Drosophila Ciboulot And The C-Terminal Domain (Residues 18-44) Of Bovine Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A Length = 54

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/41 (58%), Positives = 29/41 (70%)
Query: 54 KSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          K  E L S +E F+  KLK TET EKNPLP+KE I+ EK+A
Sbjct: 11 KVAENLKSQLEGFNQDKLKKTETQEKNPLPSKETIEQEKQA 51

>pdb|1HJ0|A Chain A, Thymosin Beta9 Length = 41

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 60 ISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA 94
          +  I +FD  KLK TET EKN LPTKE I+ EK+A
Sbjct: 6  LGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQA 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	94
3u9z_C	58	Ciboulot, isoform A; contractIle protein, protein	99.73
1hj0_A	41	Thymosin BETA9; actin binding peptide, T-cell diff	99.7
3sjh_B	54	Ciboulot/thymosin beta-4 chimeric protein; protein	99.68
1hj0_A	41	Thymosin BETA9; actin binding peptide, T-cell diff	99.68
3u9z_C	58	Ciboulot, isoform A; contractIle protein, protein	99.68
3sjh_B	54	Ciboulot/thymosin beta-4 chimeric protein; protein	99.64
2ff6_H	26	CG4944-PC, isoform C; protein-protein complex, str	98.87
2ff6_H	26	CG4944-PC, isoform C; protein-protein complex, str	98.84
3m3n_W	101	N-WAsp, neural wiskott-aldrich syndrome protein; a	98.75
3m3n_W	101	N-WAsp, neural wiskott-aldrich syndrome protein; a	98.14
1t44_G	147	Chimera of gelsolin domain 1 and C-terminal domain	98.1
1t44_G	147	Chimera of gelsolin domain 1 and C-terminal domain	97.6
3tu5_B	297	Gelsolin, protein cordon-BLeu, thymosin beta-4; un	94.03
3tu5_B	297	Gelsolin, protein cordon-BLeu, thymosin beta-4; un	88.67
2a41_C	32	Wiskott-aldrich syndrome protein interacting PROT;	80.19

>3u9z_C Ciboulot, isoform A; contractIle protein, protein binding; HET: ADP; 2.09A {Drosophila melanogaster} PDB: 1sqk_B*

Probab=99.73  E-value=6.3e-19  Score=112.34  Aligned_cols=47  Identities=34%  Similarity=0.490  Sum_probs=44.5

Q ss_pred             hhchhhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHHHhhh
Q psy16529          4 EKTHNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLIS   61 (94)
Q Consensus         4 EK~~~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~~l~~   61 (94)
                      .|++..++++|++||+++||||+|+|||+|||+|+           |+|||++++|++
T Consensus        12 pkv~~~l~~eie~Fdk~kLKkteTqEKn~LPskE~-----------I~qEK~~~~l~e   58 (58)
T 3u9z_C           12 PKVAENLKSQLEGFDKSKLKNASTQEKIILPTAED-----------VAAEKTQQSIFE   58 (58)
T ss_pred             hhhHHHHHHHHHhcChhhcccccccccCCCCCHHH-----------HHHHHHHHHHhC
Confidence            47888999999999999999999999999999999           999999999874

>1hj0_A Thymosin BETA9; actin binding peptide, T-cell differentiation, immunopotentiation, thymus, actin; NMR {Bos taurus} SCOP: j.86.1.1

Probab=99.70  E-value=1.1e-19  Score=109.12  Aligned_cols=40  Identities=43%  Similarity=0.623  Sum_probs=38.0

Q ss_pred             hhhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529          7 HNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus         7 ~~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      +++++++|++||+++||||+|+|||||||+|+           |+|||+++
T Consensus         2 dkpd~~eIe~FdkskLKkteT~EKn~LPtkE~-----------IeqEK~~~   41 (41)
T 1hj0_A            2 DKPDLGEINSFDKAKLKKTETQEKNTLPTKET-----------IEQEKQAK   41 (41)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHSSSTHH-----------HHHHHHHC
T ss_pred             CCcchhhhcccchhhcccccccccCCCCCHHH-----------HHHHHhcC
Confidence            68999999999999999999999999999999           99999863

>3sjh_B Ciboulot/thymosin beta-4 chimeric protein; protein-protein complex, contractIle protein, protein bindin; HET: ATP LAR; 1.75A {Drosophila melanogaster} PDB: 3u8x_B* 3u9d_B*

Probab=99.68  E-value=3.1e-18  Score=107.84  Aligned_cols=39  Identities=59%  Similarity=0.819  Sum_probs=17.2

Q ss_pred             HHHhhhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         56 KEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        56 ~~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      ...|.++|++||+++||||||+|||+|||+|+|+|||+|
T Consensus        13 ~e~lk~~ie~Fdk~kLKkteTqEKN~LPTkE~IeqEK~a   51 (54)
T 3sjh_B           13 AENLKSQLEGFNQDKLKKTETQEKNPLPSKETIEQEKQA   51 (54)
T ss_dssp             HHHHHHHHHHCCGGGSBCC--------------------
T ss_pred             hHHHHHHHhccCHhhcccccccccCCCCCHHHHHHHHHh
Confidence            456889999999999999999999999999999999985

>1hj0_A Thymosin BETA9; actin binding peptide, T-cell differentiation, immunopotentiation, thymus, actin; NMR {Bos taurus} SCOP: j.86.1.1

Probab=99.68  E-value=1.3e-19  Score=108.87  Aligned_cols=38  Identities=55%  Similarity=0.730  Sum_probs=35.6

Q ss_pred             HHhhhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         57 EKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        57 ~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      .+.|++|++||+++||||||+|||+|||+|+|+|||+|
T Consensus         3 kpd~~eIe~FdkskLKkteT~EKn~LPtkE~IeqEK~~   40 (41)
T 1hj0_A            3 KPDLGEINSFDKAKLKKTETQEKNTLPTKETIEQEKQA   40 (41)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHSSSTHHHHHHHHH
T ss_pred             CcchhhhcccchhhcccccccccCCCCCHHHHHHHHhc
Confidence            35689999999999999999999999999999999975

>3u9z_C Ciboulot, isoform A; contractIle protein, protein binding; HET: ADP; 2.09A {Drosophila melanogaster} PDB: 1sqk_B*

Probab=99.68  E-value=1.2e-17  Score=106.41  Aligned_cols=41  Identities=46%  Similarity=0.557  Sum_probs=38.1

Q ss_pred             HhHHHhhhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         54 KSKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        54 K~~~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      |-...++++|++||+++||||+|+|||+|||+|+|+|||++
T Consensus        13 kv~~~l~~eie~Fdk~kLKkteTqEKn~LPskE~I~qEK~~   53 (58)
T 3u9z_C           13 KVAENLKSQLEGFDKSKLKNASTQEKIILPTAEDVAAEKTQ   53 (58)
T ss_pred             hhHHHHHHHHHhcChhhcccccccccCCCCCHHHHHHHHHH
Confidence            45667999999999999999999999999999999999973

>3sjh_B Ciboulot/thymosin beta-4 chimeric protein; protein-protein complex, contractIle protein, protein bindin; HET: ATP LAR; 1.75A {Drosophila melanogaster} PDB: 3u8x_B* 3u9d_B*

Probab=99.64  E-value=2.2e-17  Score=103.95  Aligned_cols=40  Identities=45%  Similarity=0.654  Sum_probs=16.0

Q ss_pred             hhhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529          7 HNALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus         7 ~~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      ...++++|++||+++||||||+|||+|||+|+           |+|||++.
T Consensus        13 ~e~lk~~ie~Fdk~kLKkteTqEKN~LPTkE~-----------IeqEK~a~   52 (54)
T 3sjh_B           13 AENLKSQLEGFNQDKLKKTETQEKNPLPSKET-----------IEQEKQAG   52 (54)
T ss_dssp             HHHHHHHHHHCCGGGSBCC--------------------------------
T ss_pred             hHHHHHHHhccCHhhcccccccccCCCCCHHH-----------HHHHHHhc
Confidence            34566669999999999999999999999999           99999875

>2ff6_H CG4944-PC, isoform C; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.05A {Drosophila melanogaster}

Probab=98.87  E-value=6.2e-10  Score=61.19  Aligned_cols=25  Identities=44%  Similarity=0.706  Sum_probs=23.1

Q ss_pred             cccccCCCCCcccCCCCCCCCcchhHHHHhHHHhhh
Q psy16529         26 ETQEKNPLPDKDGTKKKPISKCTSYEDKKSKEKLIS   61 (94)
Q Consensus        26 eTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~~l~~   61 (94)
                      +|+||||||++|+           |+|||++++++.
T Consensus         1 eT~EKn~LP~kE~-----------ieqEK~~~~l~e   25 (26)
T 2ff6_H            1 ETNEKNPLPDKEG-----------EGEESVHRRHRE   25 (26)
T ss_pred             CCCccCCCCCHHH-----------HHHHHHHHHHhc
Confidence            6999999999999           999999998864

>2ff6_H CG4944-PC, isoform C; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.05A {Drosophila melanogaster}

Probab=98.84  E-value=8.9e-10  Score=60.58  Aligned_cols=20  Identities=55%  Similarity=0.614  Sum_probs=18.6

Q ss_pred             ccccCCCCCCHHHHHHHhhC
Q psy16529         75 ETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        75 eT~EKn~LPtke~Ie~EK~a   94 (94)
                      +|+||||||++|+|+|||++
T Consensus         1 eT~EKn~LP~kE~ieqEK~~   20 (26)
T 2ff6_H            1 ETNEKNPLPDKEGEGEESVH   20 (26)
T ss_pred             CCCccCCCCCHHHHHHHHHH
Confidence            69999999999999999973

>3m3n_W N-WAsp, neural wiskott-aldrich syndrome protein; actin dimer, ATP-binding, actin cytoskeleton, methylation, M protein, actin-binding, motor protein; HET: HIC ATP; 7.00A {Mus musculus}

Probab=98.75  E-value=2e-09  Score=74.28  Aligned_cols=38  Identities=50%  Similarity=0.684  Sum_probs=0.0

Q ss_pred             hHHHhhhhccccCCCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         55 SKEKLISGIENFDTGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        55 ~~~~l~~eIe~Fdk~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      ....|+..|..+  -.||+|+|+|||||||+|+|+|||+|
T Consensus        61 ~r~~Ll~aIr~a--l~lkk~~t~~~n~~p~~~~~~~~~~~   98 (101)
T 3m3n_W           61 GRDALLDQIRQG--IQLKKTETQEKNPLPSKETIEQEKQA   98 (101)
T ss_dssp             ----------------------------------------
T ss_pred             chHHHHHHHHHH--HHhcccCchhcCCCCCHHHHHHHHHh
Confidence            456678888886  78999999999999999999999986

>3m3n_W N-WAsp, neural wiskott-aldrich syndrome protein; actin dimer, ATP-binding, actin cytoskeleton, methylation, M protein, actin-binding, motor protein; HET: HIC ATP; 7.00A {Mus musculus}

Probab=98.14  E-value=2.9e-07  Score=63.45  Aligned_cols=37  Identities=43%  Similarity=0.644  Sum_probs=0.0

Q ss_pred             hhHhhhhhhcCCCCCccccccccCCCCCcccCCCCCCCCcchhHHHHhHH
Q psy16529          8 NALIEGVEAFDTAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSKE   57 (94)
Q Consensus         8 ~~~~~eve~Fd~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~~   57 (94)
                      .+++..|..+  -.||+|+|+|||||||+|+           |+|||++.
T Consensus        63 ~~Ll~aIr~a--l~lkk~~t~~~n~~p~~~~-----------~~~~~~~~   99 (101)
T 3m3n_W           63 DALLDQIRQG--IQLKKTETQEKNPLPSKET-----------IEQEKQAG   99 (101)
T ss_dssp             --------------------------------------------------
T ss_pred             HHHHHHHHHH--HHhcccCchhcCCCCCHHH-----------HHHHHHhc
Confidence            4566677766  6799999999999999999           99999865

>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1

Probab=98.10  E-value=1.2e-06  Score=62.27  Aligned_cols=26  Identities=58%  Similarity=0.869  Sum_probs=24.7

Q ss_pred             CCCCcccccccCCCCCCHHHHHHHhh
Q psy16529         68 TGKLKHTETVEKNPLPTKEAIDLEKK   93 (94)
Q Consensus        68 k~kLKkteT~EKn~LPtke~Ie~EK~   93 (94)
                      .|.|||++|+++|||||+|+|+|||+
T Consensus       122 ~s~~k~~et~~~~~~p~~~~~~~~~~  147 (147)
T 1t44_G          122 ASGFKHVETQEKNPLPSKETIEQEKQ  147 (147)
T ss_dssp             CCCCBCCCCEECCCCCCHHHHHHHHC
T ss_pred             ccccceeccccccCCCCHhHHhhhcC
Confidence            58999999999999999999999995

>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1

Probab=97.60  E-value=1.4e-05  Score=56.74  Aligned_cols=26  Identities=54%  Similarity=0.823  Sum_probs=24.3

Q ss_pred             CCCCccccccccCCCCCcccCCCCCCCCcchhHHHHh
Q psy16529         19 TAKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKS   55 (94)
Q Consensus        19 ~skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~   55 (94)
                      .|.|||++|+++||||++|+           |+|||+
T Consensus       122 ~s~~k~~et~~~~~~p~~~~-----------~~~~~~  147 (147)
T 1t44_G          122 ASGFKHVETQEKNPLPSKET-----------IEQEKQ  147 (147)
T ss_dssp             CCCCBCCCCEECCCCCCHHH-----------HHHHHC
T ss_pred             ccccceeccccccCCCCHhH-----------HhhhcC
Confidence            58999999999999999999           999984

>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}

Probab=94.03  E-value=0.0094  Score=46.45  Aligned_cols=38  Identities=47%  Similarity=0.716  Sum_probs=0.0

Q ss_pred             HHhhhhccccC-CCCCcccccccCCCCCCHHHHHHHhhC
Q psy16529         57 EKLISGIENFD-TGKLKHTETVEKNPLPTKEAIDLEKKA   94 (94)
Q Consensus        57 ~~l~~eIe~Fd-k~kLKkteT~EKn~LPtke~Ie~EK~a   94 (94)
                      +++|..|..=- .-+|++++++++||+|+.+.|++|+.+
T Consensus       256 ~A~L~aIrsgtGa~rLkKv~~~~~~P~p~~~~~~~~~~~  294 (297)
T 3tu5_B          256 QALMDAIRSGTGAARLRKTETQEKNPLPSKETIEQEKQA  294 (297)
T ss_dssp             ---------------------------------------
T ss_pred             hhhhHhhhcCCCCeeccccccccCCCCCchhhhhHHhhc
Confidence            55677774422 346999999999999999999999875

>3tu5_B Gelsolin, protein cordon-BLeu, thymosin beta-4; unusual hairpin conformation in the D-loop, structural prote binding protein complex; HET: ATP; 3.00A {Homo sapiens}

Probab=88.67  E-value=0.083  Score=41.12  Aligned_cols=26  Identities=54%  Similarity=0.832  Sum_probs=0.0

Q ss_pred             CCCccccccccCCCCCcccCCCCCCCCcchhHHHHhH
Q psy16529         20 AKLKHAETQEKNPLPDKDGTKKKPISKCTSYEDKKSK   56 (94)
Q Consensus        20 skLK~teTqEKN~LPtke~~~~~~~s~c~~I~qEK~~   56 (94)
                      ..|++++++++||||+.+.           |.||+..
T Consensus       269 ~rLkKv~~~~~~P~p~~~~-----------~~~~~~~  294 (297)
T 3tu5_B          269 ARLRKTETQEKNPLPSKET-----------IEQEKQA  294 (297)
T ss_dssp             -------------------------------------
T ss_pred             eeccccccccCCCCCchhh-----------hhHHhhc
Confidence            4699999999999999998           9999853

>2a41_C Wiskott-aldrich syndrome protein interacting PROT; WIP, WH2, WAsp, DNAse I, ARP2/3, structural protein; HET: HIC NAG BMA ATP; 2.60A {Bos taurus}

Probab=80.19  E-value=0.85  Score=25.36  Aligned_cols=23  Identities=30%  Similarity=0.442  Sum_probs=20.1

Q ss_pred             hhhHhhhhhhcCCCCCccccccccC
Q psy16529          7 HNALIEGVEAFDTAKLKHAETQEKN   31 (94)
Q Consensus         7 ~~~~~~eve~Fd~skLK~teTqEKN   31 (94)
                      +.++++.|..|  .+|||+.|..+.
T Consensus         5 r~aLL~~I~~G--~~Lkk~~t~DrS   27 (32)
T 2a41_C            5 RNALLSDISKG--KKLKKTVTNDRS   27 (32)
T ss_dssp             HHHHHHHHHHC--CCCBCCCCEECC
T ss_pred             hHHHHHHHHcC--CcCCceecccCc
Confidence            57899999998  999999997664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00