Psyllid ID: psy16914


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280----
MKRLHPSGPETLQPEERGDKSAKEETSELAKEETSELAKEETSELAKEKTSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEETSELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSELAKEKTRELAKEEETRELAKEKTRELAKEKTRELAKEETSELAKEETKKLAKEKTRELAKEETN
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHcccccccccccccccccccc
ccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
mkrlhpsgpetlqpeergdksaKEETSELAKEETSELAKEETSELAKEKTSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEETSELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSELAKEKTRELAKEEETRELAKEKTRELAKEKTRELAKEETSELAKEETKKLAKEKTRELAKEETN
mkrlhpsgpetlqpeergdksakeETSElakeetselakeetselakektselakeetselakektrelakeetrelakeetselakektrelakeetselakeetselakektrelakeetrelakeetselakeetrelakektrelakektrelakektrelakektrelakeetselakeetrelakeetselakeetselakeetrelakeetselakektrelakeeetrelakektrelakektrelakeetselakeetkklakektrelakeetn
MKRLHPSGPETLQPEERGDKSAKEETSELAKEETSELAKEETSELAKEKTSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEETSELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSELAKEKTRELAKEEETRELAKEKTRELAKEKTRelakeetselakeetkklakektrelakeetN
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKRLHPSGPETLQPEERGDKSAKEETSELAKEETSELAKEETSELAKEKTSELAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxELAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
156369634239 predicted protein [Nematostella vectensi 0.813 0.966 0.304 4e-46
291223193267 PREDICTED: predicted protein-like [Sacco 0.876 0.932 0.264 2e-32
307210305363 hypothetical protein EAI_00276 [Harpegna 0.975 0.763 0.368 3e-25
350427186 1151 PREDICTED: hypothetical protein LOC10074 0.911 0.225 0.285 5e-25
307194560339 hypothetical protein EAI_16499 [Harpegna 0.947 0.793 0.371 5e-25
307210193 714 hypothetical protein EAI_01794 [Harpegna 0.957 0.380 0.367 6e-25
186701890 399 multiple banded antigen [Ureaplasma parv 0.732 0.521 0.379 6e-25
307211600 463 hypothetical protein EAI_09486 [Harpegna 0.947 0.580 0.371 8e-25
307200066346 hypothetical protein EAI_14763 [Harpegna 0.957 0.786 0.367 9e-25
307208655 534 hypothetical protein EAI_07868 [Harpegna 0.947 0.503 0.371 9e-25
>gi|156369634|ref|XP_001628080.1| predicted protein [Nematostella vectensis] gi|156215047|gb|EDO36017.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
 Score =  191 bits (484), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 123/240 (51%), Gaps = 9/240 (3%)

Query: 50  TSELAKEETSELAKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSEL 109
             +LA   + +LA   +R+LA   +R+LA     +LA    R+LA   + +LA     +L
Sbjct: 1   GGQLAHPGSGQLAHPGSRQLAHPSSRQLAHPGGGQLAHPGGRQLAHLGSGQLAHPGGGQL 60

Query: 110 AKEKTRELAKEETRELAKEETSELAKEETRELAKEKTRELAKEKTRELAKEK-------- 161
           A   +R+LA   +R+LA   + +LA   +R+LA   +R+LA   +R+LA           
Sbjct: 61  AHPGSRQLAHPGSRQLAHPGSGQLAHPGSRQLAHPGSRQLAHPGSRQLAHPGGGQLAHPG 120

Query: 162 TRELAKEKTRELAKEETSELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSEL 221
           +R+LA   +R+LA   + +LA   +R+LA   + +LA     +LA    R+LA   + +L
Sbjct: 121 SRQLAHPGSRQLAHPGSGQLAHPGSRQLAHPGSRQLAHPGGGQLAHPGGRQLAHPGSGQL 180

Query: 222 AKEKTRELAKEEETRELAKEKTRELAKEKTRELAKEETSELAKEETKKLAKEKTRELAKE 281
           A     +LA    +R+LA   +R+LA   +R+LA   + +LA     +LA   + +LA  
Sbjct: 181 AHPGGGQLA-HPGSRQLAHPGSRQLAHPGSRQLAHPGSRQLAHPGGGQLAHPGSGQLAHP 239




Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|291223193|ref|XP_002731594.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information
>gi|307210305|gb|EFN86935.1| hypothetical protein EAI_00276 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350427186|ref|XP_003494680.1| PREDICTED: hypothetical protein LOC100749894 [Bombus impatiens] Back     alignment and taxonomy information
>gi|307194560|gb|EFN76852.1| hypothetical protein EAI_16499 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307210193|gb|EFN86866.1| hypothetical protein EAI_01794 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|186701890|ref|ZP_02553955.2| multiple banded antigen [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186701198|gb|EDU19480.1| multiple banded antigen [Ureaplasma parvum serovar 6 str. ATCC 27818] Back     alignment and taxonomy information
>gi|307211600|gb|EFN87649.1| hypothetical protein EAI_09486 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307200066|gb|EFN80412.1| hypothetical protein EAI_14763 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|307208655|gb|EFN85945.1| hypothetical protein EAI_07868 [Harpegnathos saltator] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query284
POMBASE|SPAC17C9.03 1403 tif471 "translation initiation 0.873 0.176 0.362 3.5e-30
UNIPROTKB|Q08695344 mst101(1) "Axoneme-associated 0.866 0.715 0.352 2.1e-29
UNIPROTKB|Q8IIG7 1070 PF11_0207 "Uncharacterized pro 0.802 0.213 0.396 2.4e-28
WB|WBGene0000643618 ttn-1 [Caenorhabditis elegans 0.862 13.61 0.340 2e-27
DICTYBASE|DDB_G0270880 1720 gflC "PHD zinc finger-containi 0.781 0.129 0.356 5e-23
UNIPROTKB|Q08696 1391 mst101(2) "Axoneme-associated 0.873 0.178 0.321 2.8e-25
DICTYBASE|DDB_G0289719 1419 DDB_G0289719 "SFRS2-interactin 0.845 0.169 0.324 3.6e-25
DICTYBASE|DDB_G02704441360 DDB_G0270444 "protein kinase, 0.792 0.165 0.348 7.1e-25
UNIPROTKB|Q7RQS4 467 PY01018 "Uncharacterized prote 0.834 0.507 0.327 8.9e-24
DICTYBASE|DDB_G0271058 1528 vilC "villin-like protein C" [ 0.830 0.154 0.383 3.3e-23
POMBASE|SPAC17C9.03 tif471 "translation initiation factor eIF4G" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
 Score = 347 (127.2 bits), Expect = 3.5e-30, P = 3.5e-30
 Identities = 91/251 (36%), Positives = 116/251 (46%)

Query:     1 MKRLHP-SGPETLQPEERGDKSAKEETSELAKEETSELAKEETSELAKEKTSELAKEETS 59
             +K ++P +  E + P++        ET+  A  ET   A  + SE    +  +  K    
Sbjct:   477 LKIVNPVTHTEVVVPQKNASSPNPSETNSRA--ETPTAAPPQISEEEASQRKDAIKLAIQ 534

Query:    60 ELAKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAK 119
             +  +EK    AK +  E A+ E  E AK +  E AK E  E AK E  E AK +  E AK
Sbjct:   535 QRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAK 594

Query:   120 EETRELAKEETSELAKEETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEETS 179
              E  E AK E  E AK E  E AK +  E AK +  E AK +  E AK +  E AK E  
Sbjct:   595 REAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 654

Query:   180 ELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSELAKEKTRELAKEEETRELA 239
             E AK E  E AK E  E AK E  E AK E  E  K ET E AK K  E  K E  +   
Sbjct:   655 EKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPE 714

Query:   240 KEKTRELAKEK 250
              + +  LA  +
Sbjct:   715 IKSSAPLASSE 725


GO:0002183 "cytoplasmic translational initiation" evidence=NAS
GO:0003677 "DNA binding" evidence=IEA
GO:0003743 "translation initiation factor activity" evidence=IEA
GO:0005198 "structural molecule activity" evidence=TAS
GO:0005515 "protein binding" evidence=IPI
GO:0005829 "cytosol" evidence=IDA
GO:0016070 "RNA metabolic process" evidence=IEA
GO:0042273 "ribosomal large subunit biogenesis" evidence=ISO
GO:0048471 "perinuclear region of cytoplasm" evidence=IEA
UNIPROTKB|Q08695 mst101(1) "Axoneme-associated protein mst101(1)" [Drosophila hydei (taxid:7224)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IIG7 PF11_0207 "Uncharacterized protein PF11_0207" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
WB|WBGene00006436 ttn-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270880 gflC "PHD zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q08696 mst101(2) "Axoneme-associated protein mst101(2)" [Drosophila hydei (taxid:7224)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0289719 DDB_G0289719 "SFRS2-interacting protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270444 DDB_G0270444 "protein kinase, CMGC group" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q7RQS4 PY01018 "Uncharacterized protein" [Plasmodium yoelii yoelii (taxid:73239)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271058 vilC "villin-like protein C" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 2e-06
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 3e-05
TIGR03319 514 TIGR03319, RNase_Y, ribonuclease Y 3e-05
PRK05771 646 PRK05771, PRK05771, V-type ATP synthase subunit I; 1e-04
PRK05035695 PRK05035, PRK05035, electron transport complex pro 2e-04
TIGR03319 514 TIGR03319, RNase_Y, ribonuclease Y 3e-04
PRK05771 646 PRK05771, PRK05771, V-type ATP synthase subunit I; 6e-04
COG1269 660 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase su 6e-04
TIGR03319 514 TIGR03319, RNase_Y, ribonuclease Y 7e-04
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 8e-04
PRK05771 646 PRK05771, PRK05771, V-type ATP synthase subunit I; 0.001
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 0.004
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
 Score = 48.6 bits (117), Expect = 2e-06
 Identities = 61/167 (36%), Positives = 86/167 (51%), Gaps = 9/167 (5%)

Query: 62  AKEKTRELAKEETRELAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAKEE 121
           AK K  E   +   E AK+E   + KE   E AKEE  +L + E  +  +E+  EL K E
Sbjct: 31  AKIKEAEEEAKRILEEAKKEAEAIKKEALLE-AKEEIHKL-RNEFEKELRERRNELQKLE 88

Query: 122 TRELAKEET----SELAKEETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEE 177
            R L KEE      EL ++   EL K++     K++  E  +E+  EL +E+ +EL  E 
Sbjct: 89  KRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQEL--ER 146

Query: 178 TSELAKEETRELAKEETSELAKEETSELAKEETRELAKEETSELAKE 224
            S L  EE +E+  E+  E A+ E + L KE   E AKEE  + AKE
Sbjct: 147 ISGLTAEEAKEILLEKVEEEARHEAAVLIKEIEEE-AKEEADKKAKE 192


Length = 520

>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y Back     alignment and domain information
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated Back     alignment and domain information
>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional Back     alignment and domain information
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y Back     alignment and domain information
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated Back     alignment and domain information
>gnl|CDD|224188 COG1269, NtpI, Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|235600 PRK05771, PRK05771, V-type ATP synthase subunit I; Validated Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 284
COG3064387 TolA Membrane protein involved in colicin uptake [ 94.77
>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
Probab=94.77  E-value=4.8  Score=39.88  Aligned_cols=7  Identities=14%  Similarity=0.121  Sum_probs=2.6

Q ss_pred             HHHHHHH
Q psy16914        164 ELAKEKT  170 (284)
Q Consensus       164 ~~akeea  170 (284)
                      ++.+.++
T Consensus       192 ~k~kaEa  198 (387)
T COG3064         192 AKKKAEA  198 (387)
T ss_pred             HHHHHHH
Confidence            3333333




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query284
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-10
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 2e-10
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 1e-08
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 9e-06
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 2e-09
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 6e-08
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 9e-07
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 1e-06
1i84_S 1184 Smooth muscle myosin heavy chain; muscle protein, 2e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-04
2w00_A1038 HSDR, R.ECOR124I; ATP-binding, DNA-binding, restri 5e-05
2w00_A1038 HSDR, R.ECOR124I; ATP-binding, DNA-binding, restri 2e-04
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 6e-05
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 4e-04
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 40/257 (15%), Positives = 94/257 (36%), Gaps = 9/257 (3%)

Query: 17   RGDKSAKEETSELAKEETSELAKEETSELAKEKTSELAKEETSELAKEKTRELAKEETRE 76
            +  +  ++ T  L       L + +   + +E  S + ++               +    
Sbjct: 833  KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVY 892

Query: 77   LAKEETSELAKEKTRELAKEETSELAKEETSELAKEKTRELAKEETRELAKEETSELAKE 136
            L       +AK + ++L  E  S    ++     + K  +L  +   +   +E   L  E
Sbjct: 893  LQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQL--QRKIDEQNKEYKSL-LE 949

Query: 137  ETRELAKEKTRELAKEKTRELAKEKTRELAKEKTRELAKEETSELAKEETRELAKEETSE 196
            +   L    + E  K ++       + E AK  T  +   +      EE  +L KE    
Sbjct: 950  KMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQ------EEIAKLRKELHQT 1003

Query: 197  LAKEETSELAKEETRELAKEETSELAKEKTRELAKEEETRELAKEKTRELAKEKTRELAK 256
              +++T E   ++ +   ++  SEL ++ T    ++EE      ++ +E+ +   ++L +
Sbjct: 1004 QTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVE 1063

Query: 257  EETSELAKEETKKLAKE 273
            E          ++L  +
Sbjct: 1064 ETKQLELDLNDERLRYQ 1080


>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2w00_A HSDR, R.ECOR124I; ATP-binding, DNA-binding, restriction system, helicase, HYDR R.ECOR124I, nucleotide-binding; HET: ATP; 2.6A {Escherichia coli} PDB: 2y3t_A* 2w74_B* Length = 1038 Back     alignment and structure
>2w00_A HSDR, R.ECOR124I; ATP-binding, DNA-binding, restriction system, helicase, HYDR R.ECOR124I, nucleotide-binding; HET: ATP; 2.6A {Escherichia coli} PDB: 2y3t_A* 2w74_B* Length = 1038 Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00