Psyllid ID: psy17090

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNINN
cccccccccccccccccccHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccEEEccccccccccccccEEEEEccccccHHHcccccccHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHHccccEEEEEcccHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHcc
cccEEccccccEEEEcccccHHHHHHHHHccccccccEEEEEEccccccccccccHHHHHHHEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccEEEccccHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHccccEEEccccEccccccccEEEEEEEccccccEEEEcccccccHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEccHHHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHcccEEEEEEcHHHHHcccEEEEcccccccccccHHHHccHHHHHHHHHHHHHHHHcc
mysfidelngdnlslrpegtASVIRSVIEnnliydgpkrlwysgpmfrherpqygryrqFYQIGVeaigfpgpdidAELIIMCSRLWKNLNLKNICLELnsignfneRKKYCIDLINYIKkhkdskwfcedikhslylnslrvldsknLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTtdklgsqnsicgggryDFLIKKfsnkfvpasgfAIGIERLIELIKKINinhnfshqcDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLrnkyedptlkqiSISFKDAENYFYKKIIKNINN
mysfidelngdnlslrpegTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELnsignfneRKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQkilnynnisYKINTKLVRGMDYYNRTVFEWttdklgsqnsiCGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDptlkqisisfkdaenyfykkiikninn
MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRanasnanfaaiigeneiinntliiKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNINN
*******************TASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKN***
MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFN*******SQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYK*IIK****
MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNINN
MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNI**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKKIIKNINN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query373 2.2.26 [Sep-21-2011]
B2JIV0446 Histidine--tRNA ligase OS yes N/A 0.991 0.829 0.521 1e-116
Q13X29446 Histidine--tRNA ligase OS yes N/A 0.919 0.769 0.554 1e-116
Q8Y029432 Histidine--tRNA ligase OS yes N/A 0.908 0.784 0.558 1e-115
B2SXS9446 Histidine--tRNA ligase OS yes N/A 0.908 0.760 0.552 1e-114
Q2SWE3446 Histidine--tRNA ligase OS yes N/A 0.914 0.764 0.543 1e-114
A9AGZ7446 Histidine--tRNA ligase OS yes N/A 0.919 0.769 0.549 1e-114
Q46ZI4456 Histidine--tRNA ligase OS yes N/A 0.908 0.743 0.558 1e-114
A4JEN9446 Histidine--tRNA ligase OS yes N/A 0.919 0.769 0.546 1e-114
A3NA53446 Histidine--tRNA ligase OS yes N/A 0.903 0.755 0.543 1e-113
Q0BEW8446 Histidine--tRNA ligase OS yes N/A 0.919 0.769 0.546 1e-113
>sp|B2JIV0|SYH_BURP8 Histidine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=hisS PE=3 SV=1 Back     alignment and function desciption
 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 195/374 (52%), Positives = 266/374 (71%), Gaps = 4/374 (1%)

Query: 1   MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
           MYSF D LNG+NL++RPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 73  MYSFTDALNGENLTMRPENTAAVVRASIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 132

Query: 61  YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
           +Q+GVEA+GF GPD DAE+I+MC RLW +L L  I LE+NS+G   ER K+ ++LI Y++
Sbjct: 133 HQVGVEALGFAGPDTDAEIILMCQRLWDDLGLTGIKLEINSLGLAEERAKHRVELIAYLE 192

Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
           KH D     ED K  LY N LRVLD+KN  ++ +  NAPKL+D+L  +S  HF G+Q+IL
Sbjct: 193 KHMDV--LDEDAKRRLYTNPLRVLDTKNPALQAVAQNAPKLIDFLGDESRAHFEGLQRIL 250

Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
             NNI + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++   K   A G
Sbjct: 251 KANNIPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 310

Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
           +A+GIER++EL+K+ N+    +  CD+Y+ H G+ A  +AF+++E LR  GL VIL+C  
Sbjct: 311 WAMGIERILELLKEENLVPE-NEGCDVYVAHQGEAARDQAFIVAERLRDTGLDVILHCSP 369

Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYE-DPTLKQISISFKDA 359
           +    SFKSQMKRA+AS A FA I+GE+EI N T  +K LR+  + +   +Q ++  +D 
Sbjct: 370 DGQASSFKSQMKRADASGAAFAVILGEDEIANGTAGVKALRDSSQSNGKSEQQTVPLEDL 429

Query: 360 ENYFYKKIIKNINN 373
             Y    ++ +  +
Sbjct: 430 TEYLINAMVASTED 443

Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1
>sp|Q13X29|SYH_BURXL Histidine--tRNA ligase OS=Burkholderia xenovorans (strain LB400) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|Q8Y029|SYH_RALSO Histidine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|B2SXS9|SYH_BURPP Histidine--tRNA ligase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|Q2SWE3|SYH_BURTA Histidine--tRNA ligase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=hisS PE=1 SV=1 Back     alignment and function description
>sp|A9AGZ7|SYH_BURM1 Histidine--tRNA ligase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|Q46ZI4|SYH_CUPPJ Histidine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|A4JEN9|SYH_BURVG Histidine--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|A3NA53|SYH_BURP6 Histidine--tRNA ligase OS=Burkholderia pseudomallei (strain 668) GN=hisS PE=3 SV=1 Back     alignment and function description
>sp|Q0BEW8|SYH_BURCM Histidine--tRNA ligase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=hisS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
399018044448 histidyl-tRNA synthetase [Herbaspirillum 0.973 0.810 0.567 1e-125
300312256451 histidyl-tRNA synthetase [Herbaspirillum 0.978 0.809 0.571 1e-125
409406677470 histidyl-tRNA synthetase [Herbaspirillum 0.978 0.776 0.569 1e-124
415943456438 Histidyl-tRNA synthetase [Herbaspirillum 0.978 0.833 0.571 1e-124
340787106459 histidyl-tRNA synthetase [Collimonas fun 0.978 0.795 0.552 1e-123
398836193462 histidyl-tRNA synthetase [Herbaspirillum 0.908 0.733 0.584 1e-122
134094492448 histidine tRNA synthetase [Herminiimonas 0.967 0.805 0.562 1e-122
237747710454 histidine tRNA synthetase [Oxalobacter f 0.970 0.797 0.569 1e-121
152980083449 histidyl-tRNA synthetase [Janthinobacter 0.973 0.808 0.557 1e-121
445498329450 histidyl-tRNA ligase HisS [Janthinobacte 0.906 0.751 0.586 1e-120
>gi|399018044|ref|ZP_10720230.1| histidyl-tRNA synthetase [Herbaspirillum sp. CF444] gi|398102009|gb|EJL92201.1| histidyl-tRNA synthetase [Herbaspirillum sp. CF444] Back     alignment and taxonomy information
 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/368 (56%), Positives = 276/368 (75%), Gaps = 5/368 (1%)

Query: 1   MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
           MYSF D +NGDNL+LRPE TASV+R+ +E+NL YDGPKRLWY+GPMFRHERPQ GRYRQF
Sbjct: 72  MYSFTDSMNGDNLTLRPENTASVVRAALEHNLTYDGPKRLWYAGPMFRHERPQRGRYRQF 131

Query: 61  YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
           +Q+G EA+GF GPDIDAELI+MC RLW +L L++I LELNSIGN  ER K+  DLI Y +
Sbjct: 132 HQVGAEALGFTGPDIDAELIMMCQRLWDDLGLQDIRLELNSIGNAEERNKHRADLIAYFE 191

Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
           +HK+      D +  L+ N LR+LD+KN  +++++  APKLLDYL ++S  HF G+QKIL
Sbjct: 192 QHKE--LLDADAQRRLHSNPLRILDTKNPAMQDMVNGAPKLLDYLGEESRTHFEGVQKIL 249

Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
           N+NNI + IN +LVRGMDYYNRTVFEW TD+LGSQ ++CGGGRYD LI+ F  K  PA G
Sbjct: 250 NHNNIPFTINPRLVRGMDYYNRTVFEWVTDQLGSQGTVCGGGRYDPLIEMFGGKPTPACG 309

Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
           FA+G+ERL+EL+K     +   +QCDIY+VH G+ A+L++FV++E LR+ GL V+L+C  
Sbjct: 310 FAMGVERLLELMKASGEQYA-PNQCDIYLVHQGEAAQLQSFVMAERLRSAGLDVVLHCAS 368

Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAE 360
            +   SFKSQMK+A+AS A FA IIGE+E+ N T  +K+LR    +    Q+++ F    
Sbjct: 369 ASAGGSFKSQMKKADASGAAFAVIIGEDEVTNATATVKNLRAAEGESN--QVTVPFDGVP 426

Query: 361 NYFYKKII 368
           +Y   +I+
Sbjct: 427 DYVVDQIV 434

Source: Herbaspirillum sp. CF444

Species: Herbaspirillum sp. CF444

Genus: Herbaspirillum

Family: Oxalobacteraceae

Order: Burkholderiales

Class: Betaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria
>gi|300312256|ref|YP_003776348.1| histidyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300075041|gb|ADJ64440.1| histidyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Back     alignment and taxonomy information
>gi|409406677|ref|ZP_11255139.1| histidyl-tRNA synthetase [Herbaspirillum sp. GW103] gi|386435226|gb|EIJ48051.1| histidyl-tRNA synthetase [Herbaspirillum sp. GW103] Back     alignment and taxonomy information
>gi|415943456|ref|ZP_11556065.1| Histidyl-tRNA synthetase [Herbaspirillum frisingense GSF30] gi|407758696|gb|EKF68486.1| Histidyl-tRNA synthetase [Herbaspirillum frisingense GSF30] Back     alignment and taxonomy information
>gi|340787106|ref|YP_004752571.1| histidyl-tRNA synthetase [Collimonas fungivorans Ter331] gi|340552373|gb|AEK61748.1| Histidyl-tRNA synthetase [Collimonas fungivorans Ter331] Back     alignment and taxonomy information
>gi|398836193|ref|ZP_10593539.1| histidyl-tRNA synthetase [Herbaspirillum sp. YR522] gi|398213197|gb|EJM99791.1| histidyl-tRNA synthetase [Herbaspirillum sp. YR522] Back     alignment and taxonomy information
>gi|134094492|ref|YP_001099567.1| histidine tRNA synthetase [Herminiimonas arsenicoxydans] gi|133738395|emb|CAL61440.1| histidine tRNA synthetase (Histidine--tRNA ligase) (HisRS) [Herminiimonas arsenicoxydans] Back     alignment and taxonomy information
>gi|237747710|ref|ZP_04578190.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229379072|gb|EEO29163.1| histidine tRNA synthetase [Oxalobacter formigenes OXCC13] Back     alignment and taxonomy information
>gi|152980083|ref|YP_001353816.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|151280160|gb|ABR88570.1| histidyl-tRNA synthetase [Janthinobacterium sp. Marseille] Back     alignment and taxonomy information
>gi|445498329|ref|ZP_21465184.1| histidyl-tRNA ligase HisS [Janthinobacterium sp. HH01] gi|444788324|gb|ELX09872.1| histidyl-tRNA ligase HisS [Janthinobacterium sp. HH01] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
UNIPROTKB|Q9KTX0422 hisS "Histidine--tRNA ligase" 0.927 0.819 0.452 3.4e-77
TIGR_CMR|VC_0760422 VC_0760 "histidyl-tRNA synthet 0.927 0.819 0.452 3.4e-77
UNIPROTKB|P60906424 hisS "histidyl-tRNA synthetase 0.930 0.818 0.444 1.9e-76
TIGR_CMR|SO_3311425 SO_3311 "histidyl-tRNA synthet 0.932 0.818 0.416 9.6e-73
TIGR_CMR|CBU_1248421 CBU_1248 "histidyl-tRNA synthe 0.817 0.724 0.458 7.7e-71
TIGR_CMR|GSU_1659413 GSU_1659 "histidyl-tRNA synthe 0.806 0.728 0.409 3.7e-55
TIGR_CMR|BA_4633423 BA_4633 "histidyl-tRNA synthet 0.817 0.721 0.394 4.9e-53
TIGR_CMR|CHY_2205423 CHY_2205 "histidyl-tRNA synthe 0.815 0.718 0.396 5.6e-52
TIGR_CMR|ECH_0291413 ECH_0291 "histidyl-tRNA synthe 0.793 0.716 0.398 1.7e-50
UNIPROTKB|P67483423 hisS "Histidine--tRNA ligase" 0.777 0.685 0.395 9.5e-50
UNIPROTKB|Q9KTX0 hisS "Histidine--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 162/358 (45%), Positives = 225/358 (62%)

Query:     1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
             MY+F D  NGD+L+LRPEGTA  +RS IEN L+Y+  +RLWY GPMFRHERPQ GRYRQF
Sbjct:    67 MYTFEDR-NGDSLTLRPEGTAGCVRSGIENGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125

Query:    61 YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNL-KNICLELNSIGNFNERKKYCIDLINYI 119
             +Q GVE  G  GPD+DAELI+M +RLW+ L + +++ LELNSIG+   R  Y   LI+Y+
Sbjct:   126 HQCGVEVFGLDGPDVDAELIMMTARLWRELGIAQHVRLELNSIGSLEARANYRTALIDYL 185

Query:   120 KKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKI 179
             +++++     ED K  +Y N LRVLDSKN  ++ IL +AP+L DYL+ +S  HF G+ ++
Sbjct:   186 EQYQNV--LDEDCKRRMYTNPLRVLDSKNPDVQAILGDAPQLSDYLDAESKQHFAGLCEL 243

Query:   180 LNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS 239
             L+   I Y +N +LVRG+DYYNRTVFEW T+ LGSQ ++CGGGRYD L+++   K  PA 
Sbjct:   244 LDAAGIEYTVNQRLVRGLDYYNRTVFEWITESLGSQGTVCGGGRYDGLVEQLGGKPTPAV 303

Query:   240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTL--GLKVILN 297
             GFA+G+ERL+ +++ +  N +     D+Y+V  G+   +    L+E LR    GL+V+ +
Sbjct:   304 GFAMGLERLVLMMETLG-NTDVRRSVDVYMVTAGEGTMMAGMKLAEQLREQVPGLRVMTH 362

Query:   298 CVFNNIHESFKSQMKRXXXXXXXXXXXXXXXXXXXXXXXXKDLRNKYEDPTLKQISIS 355
                 N    FK Q KR                        KDL    E  T+ Q  ++
Sbjct:   363 FGGGN----FKKQFKRADKVGAAIALVLGEDEVAAQTVVVKDLAGG-EQNTVAQAEVA 415
GO:0004821 "histidine-tRNA ligase activity" evidence=ISS
GO:0006427 "histidyl-tRNA aminoacylation" evidence=ISS
TIGR_CMR|VC_0760 VC_0760 "histidyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|P60906 hisS "histidyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3311 SO_3311 "histidyl-tRNA synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1248 CBU_1248 "histidyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1659 GSU_1659 "histidyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4633 BA_4633 "histidyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2205 CHY_2205 "histidyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0291 ECH_0291 "histidyl-tRNA synthetase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
UNIPROTKB|P67483 hisS "Histidine--tRNA ligase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5P7B4SYH_AROAE6, ., 1, ., 1, ., 2, 10.49410.89810.7648yesN/A
Q46ZI4SYH_CUPPJ6, ., 1, ., 1, ., 2, 10.55840.90880.7434yesN/A
B4EAW8SYH_BURCJ6, ., 1, ., 1, ., 2, 10.54670.90880.7600yesN/A
Q3SL69SYH_THIDA6, ., 1, ., 1, ., 2, 10.49310.94360.8400yesN/A
B5F197SYH_SALA46, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
B4TD92SYH_SALHS6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
A3NVX0SYH_BURP06, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
Q63UT2SYH_BURPS6, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
Q62JW5SYH_BURMA6, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
Q0K963SYH_CUPNH6, ., 1, ., 1, ., 2, 10.53910.91680.75yesN/A
C0PYN1SYH_SALPC6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
A3NA53SYH_BURP66, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
Q2KY92SYH_BORA16, ., 1, ., 1, ., 2, 10.50730.89540.7803yesN/A
B2SXS9SYH_BURPP6, ., 1, ., 1, ., 2, 10.55260.90880.7600yesN/A
Q82XU9SYH_NITEU6, ., 1, ., 1, ., 2, 10.54780.90610.8047yesN/A
Q7W6P7SYH_BORPA6, ., 1, ., 1, ., 2, 10.47190.93290.8130yesN/A
Q2SWE3SYH_BURTA6, ., 1, ., 1, ., 2, 10.54310.91420.7645yesN/A
A9N202SYH_SALPB6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
Q3JRQ5SYH_BURP16, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
A1V4K0SYH_BURMS6, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
A0K7T5SYH_BURCH6, ., 1, ., 1, ., 2, 10.54670.90880.7600yesN/A
Q7WHN1SYH_BORBR6, ., 1, ., 1, ., 2, 10.47190.93290.8130yesN/A
B5R581SYH_SALEP6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
A4JEN9SYH_BURVG6, ., 1, ., 1, ., 2, 10.54620.91950.7690yesN/A
B5RCZ1SYH_SALG26, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
Q39FR0SYH_BURS36, ., 1, ., 1, ., 2, 10.54620.91950.7690yesN/A
Q13X29SYH_BURXL6, ., 1, ., 1, ., 2, 10.55490.91950.7690yesN/A
Q47BR7SYH_DECAR6, ., 1, ., 1, ., 2, 10.49560.90080.7832yesN/A
Q0BEW8SYH_BURCM6, ., 1, ., 1, ., 2, 10.54620.91950.7690yesN/A
Q8Y029SYH_RALSO6, ., 1, ., 1, ., 2, 10.55840.90880.7847yesN/A
B2JIV0SYH_BURP86, ., 1, ., 1, ., 2, 10.52130.99190.8295yesN/A
A1K3Z0SYH_AZOSB6, ., 1, ., 1, ., 2, 10.50140.89810.7736yesN/A
A3MK74SYH_BURM76, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
Q0AE43SYH_NITEC6, ., 1, ., 1, ., 2, 10.54780.90880.8052yesN/A
Q1BGX3SYH_BURCA6, ., 1, ., 1, ., 2, 10.54670.90880.7600yesN/A
P62373SYH_PHOPR6, ., 1, ., 1, ., 2, 10.47650.94100.8317yesN/A
B1JT91SYH_BURCC6, ., 1, ., 1, ., 2, 10.54670.90880.7600yesN/A
Q7VWL1SYH_BORPE6, ., 1, ., 1, ., 2, 10.47190.93290.8130yesN/A
B5FR62SYH_SALDC6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
O52765SYH_SALTY6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
B1YR43SYH_BURA46, ., 1, ., 1, ., 2, 10.54620.91950.7690yesN/A
B5FAX3SYH_VIBFM6, ., 1, ., 1, ., 2, 10.47650.94100.8317yesN/A
B4TR94SYH_SALSV6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
B3R1K1SYH_CUPTR6, ., 1, ., 1, ., 2, 10.53910.91680.75yesN/A
A9AGZ7SYH_BURM16, ., 1, ., 1, ., 2, 10.54910.91950.7690yesN/A
A2S2A3SYH_BURM96, ., 1, ., 1, ., 2, 10.54360.90340.7556yesN/A
B4T0P8SYH_SALNS6, ., 1, ., 1, ., 2, 10.46640.93020.8183yesN/A
Q5E771SYH_VIBF16, ., 1, ., 1, ., 2, 10.47650.94100.8317yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.1.10.921
4th Layer6.1.1.210.914

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
TIGR00442397 TIGR00442, hisS, histidyl-tRNA synthetase 1e-156
PRK00037412 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed 1e-156
COG0124429 COG0124, HisS, Histidyl-tRNA synthetase [Translati 1e-138
CHL00201430 CHL00201, syh, histidine-tRNA synthetase; Provisio 3e-94
cd00773261 cd00773, HisRS-like_core, Class II Histidinyl-tRNA 3e-75
TIGR00443313 TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltran 2e-38
PRK12292391 PRK12292, hisZ, ATP phosphoribosyltransferase regu 1e-37
pfam13393308 pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase 6e-31
COG3705390 COG3705, HisZ, ATP phosphoribosyltransferase invol 1e-26
PLN02530487 PLN02530, PLN02530, histidine-tRNA ligase 2e-26
pfam00587171 pfam00587, tRNA-synt_2b, tRNA synthetase class II 1e-21
cd0085991 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon 1e-18
PRK12420423 PRK12420, PRK12420, histidyl-tRNA synthetase; Prov 3e-17
cd00670235 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro 4e-16
PLN02972763 PLN02972, PLN02972, Histidyl-tRNA synthetase 2e-15
PRK12295373 PRK12295, hisZ, ATP phosphoribosyltransferase regu 3e-11
cd00768211 cd00768, class_II_aaRS-like_core, Class II tRNA am 1e-09
PRK12295373 PRK12295, hisZ, ATP phosphoribosyltransferase regu 5e-08
pfam0312993 pfam03129, HGTP_anticodon, Anticodon binding domai 5e-08
PRK12421392 PRK12421, PRK12421, ATP phosphoribosyltransferase 4e-05
PRK12293281 PRK12293, hisZ, ATP phosphoribosyltransferase regu 6e-04
>gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase Back     alignment and domain information 
 Score =  444 bits (1145), Expect = e-156
 Identities = 161/343 (46%), Positives = 225/343 (65%), Gaps = 7/343 (2%)

Query: 1   MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
           MY+F D+  G +L+LRPEGTA V R+VIEN L+   P +L+Y GPMFR+ERPQ GRYRQF
Sbjct: 62  MYTFKDK-GGRSLTLRPEGTAPVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQF 120

Query: 61  YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
           +Q GVE IG   P  DAE+I + + + K L +K+  LE+NS+G    R +Y   L+ Y+ 
Sbjct: 121 HQFGVEVIGSDSPLADAEIIALAAEILKALGIKDFTLEINSLGILEGRLEYREALLRYLD 180

Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
           KH D     ED    L  N LR+LDSKN  I+E+L  APK+LD+L+++S  HF  ++++L
Sbjct: 181 KHLDK--LGEDSVRRLEKNPLRILDSKNEKIQELLKEAPKILDFLDEESRAHFEELKELL 238

Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
           +   I Y I+  LVRG+DYY  TVFE+ TD LG+Q SICGGGRYD L+++      PA G
Sbjct: 239 DALGIPYVIDPSLVRGLDYYTGTVFEFVTDGLGAQGSICGGGRYDGLVEELGGPPTPAVG 298

Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
           FAIGIERL+ L++++ +        D+Y+V +G+EAEL+A  L++ LR  G++V ++   
Sbjct: 299 FAIGIERLLLLLEELGLLPPEESSPDVYVVPLGEEAELEALKLAQKLRKAGIRVEVDL-- 356

Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNK 343
                  K Q+K A+   A FA IIGE+E+ N T+ +KDLR  
Sbjct: 357 --GGRKLKKQLKYADKLGARFAVIIGEDELANGTVTLKDLRTG 397

This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff [Protein synthesis, tRNA aminoacylation]. Length = 397
>gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|164576 CHL00201, syh, histidine-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|238396 cd00773, HisRS-like_core, Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Back     alignment and domain information
>gnl|CDD|232978 TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltransferase, regulatory subunit Back     alignment and domain information
>gnl|CDD|237043 PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>gnl|CDD|222097 pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|226228 COG3705, HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|178145 PLN02530, PLN02530, histidine-tRNA ligase Back     alignment and domain information
>gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) Back     alignment and domain information
>gnl|CDD|238436 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon binding domain Back     alignment and domain information
>gnl|CDD|237097 PRK12420, PRK12420, histidyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|238359 cd00670, Gly_His_Pro_Ser_Thr_tRS_core, Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>gnl|CDD|215525 PLN02972, PLN02972, Histidyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|183413 PRK12295, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>gnl|CDD|183413 PRK12295, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain Back     alignment and domain information
>gnl|CDD|237098 PRK12421, PRK12421, ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>gnl|CDD|183411 PRK12293, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 373
COG0124429 HisS Histidyl-tRNA synthetase [Translation, riboso 100.0
CHL00201430 syh histidine-tRNA synthetase; Provisional 100.0
PLN02972763 Histidyl-tRNA synthetase 100.0
PLN02530487 histidine-tRNA ligase 100.0
TIGR00442397 hisS histidyl-tRNA synthetase. This model finds a 100.0
PRK00037412 hisS histidyl-tRNA synthetase; Reviewed 100.0
PRK12420423 histidyl-tRNA synthetase; Provisional 100.0
KOG1936|consensus518 100.0
PRK12292391 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
PRK12421392 ATP phosphoribosyltransferase regulatory subunit; 100.0
TIGR00443314 hisZ_biosyn_reg ATP phosphoribosyltransferase, reg 100.0
PRK12295373 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
PF13393311 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI 100.0
cd00773261 HisRS-like_core Class II Histidinyl-tRNA synthetas 100.0
PRK12293281 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
TIGR00418563 thrS threonyl-tRNA synthetase. This model represen 100.0
COG3705390 HisZ ATP phosphoribosyltransferase involved in his 100.0
PRK12444639 threonyl-tRNA synthetase; Reviewed 100.0
PRK12305575 thrS threonyl-tRNA synthetase; Reviewed 100.0
PRK12294272 hisZ ATP phosphoribosyltransferase regulatory subu 100.0
PRK00413638 thrS threonyl-tRNA synthetase; Reviewed 100.0
PRK14799545 thrS threonyl-tRNA synthetase; Provisional 100.0
KOG1035|consensus1351 100.0
PRK09194565 prolyl-tRNA synthetase; Provisional 99.97
PLN02908686 threonyl-tRNA synthetase 99.97
PRK12325439 prolyl-tRNA synthetase; Provisional 99.95
TIGR00409568 proS_fam_II prolyl-tRNA synthetase, family II. Pro 99.94
PRK04173456 glycyl-tRNA synthetase; Provisional 99.93
PRK03991613 threonyl-tRNA synthetase; Validated 99.92
PLN02837614 threonine-tRNA ligase 99.91
TIGR00408472 proS_fam_I prolyl-tRNA synthetase, family I. Proly 99.89
PRK08661477 prolyl-tRNA synthetase; Provisional 99.87
COG0441589 ThrS Threonyl-tRNA synthetase [Translation, riboso 99.87
cd00670235 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t 99.79
TIGR00389551 glyS_dimeric glycyl-tRNA synthetase, dimeric type. 99.72
PLN02734684 glycyl-tRNA synthetase 99.7
KOG1637|consensus560 99.66
PRK14894539 glycyl-tRNA synthetase; Provisional 99.65
KOG2324|consensus457 99.64
PF0312994 HGTP_anticodon: Anticodon binding domain; InterPro 99.61
COG0423558 GRS1 Glycyl-tRNA synthetase (class II) [Translatio 99.59
cd00858121 GlyRS_anticodon GlyRS Glycyl-anticodon binding dom 99.58
cd0086194 ProRS_anticodon_short ProRS Prolyl-anticodon bindi 99.58
cd0086091 ThrRS_anticodon ThrRS Threonyl-anticodon binding d 99.54
cd00779255 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla 99.52
cd00771298 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class 99.52
PRK14938387 Ser-tRNA(Thr) hydrolase; Provisional 99.5
cd00862202 ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin 99.5
PF12745 273 HGTP_anticodon2: Anticodon binding domain of tRNAs 99.5
cd0073894 HGTP_anticodon HGTP anticodon binding domain, as f 99.45
PF00587173 tRNA-synt_2b: tRNA synthetase class II core domain 99.43
cd02426128 Pol_gamma_b_Cterm C-terminal domain of mitochondri 99.37
cd00772264 ProRS_core Prolyl-tRNA synthetase (ProRS) class II 99.36
TIGR02367453 PylS pyrrolysyl-tRNA synthetase. PylS is the archa 99.33
cd0085991 HisRS_anticodon HisRS Histidyl-anticodon binding d 99.29
COG0442500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 99.29
PTZ00326494 phenylalanyl-tRNA synthetase alpha chain; Provisio 99.27
cd00774254 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik 99.26
PRK04172489 pheS phenylalanyl-tRNA synthetase subunit alpha; P 99.2
PRK09537417 pylS pyrolysyl-tRNA synthetase; Reviewed 99.02
cd00768211 class_II_aaRS-like_core Class II tRNA amino-acyl s 98.91
KOG2298|consensus599 98.78
cd00778261 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) 98.69
cd00770297 SerRS_core Seryl-tRNA synthetase (SerRS) class II 98.34
TIGR00414418 serS seryl-tRNA synthetase. This model represents 97.9
KOG4163|consensus551 97.89
PRK05431425 seryl-tRNA synthetase; Provisional 97.75
PRK09350306 poxB regulator PoxA; Provisional 97.59
cd00496218 PheRS_alpha_core Phenylalanyl-tRNA synthetase (Phe 97.26
PRK00960517 seryl-tRNA synthetase; Provisional 97.26
cd00669269 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase cl 97.21
PF01409247 tRNA-synt_2d: tRNA synthetases class II core domai 97.12
PLN02853492 Probable phenylalanyl-tRNA synthetase alpha chain 97.02
PLN02320502 seryl-tRNA synthetase 97.02
TIGR00470533 sepS O-phosphoseryl-tRNA(Cys) synthetase. This fam 97.0
PLN02678448 seryl-tRNA synthetase 96.87
TIGR00468294 pheS phenylalanyl-tRNA synthetase, alpha subunit. 96.87
cd00777280 AspRS_core Asp tRNA synthetase (aspRS) class II co 96.7
PRK00488339 pheS phenylalanyl-tRNA synthetase subunit alpha; V 96.07
TIGR00415520 serS_MJ seryl-tRNA synthetase, Methanococcus janna 95.86
COG0016335 PheS Phenylalanyl-tRNA synthetase alpha subunit [T 94.79
PRK09616552 pheT phenylalanyl-tRNA synthetase subunit beta; Re 94.33
cd00776322 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class 94.12
TIGR00459583 aspS_bact aspartyl-tRNA synthetase, bacterial type 93.3
PRK00476588 aspS aspartyl-tRNA synthetase; Validated 93.02
PF00152335 tRNA-synt_2: tRNA synthetases class II (D, K and N 92.61
PLN02903652 aminoacyl-tRNA ligase 92.53
cd00775329 LysRS_core Lys_tRNA synthetase (LysRS) class II co 92.34
KOG2784|consensus483 91.9
COG0172429 SerS Seryl-tRNA synthetase [Translation, ribosomal 91.79
COG0442 500 ProS Prolyl-tRNA synthetase [Translation, ribosoma 91.29
PRK06253529 O-phosphoseryl-tRNA synthetase; Reviewed 90.79
cd00769198 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheR 90.31
COG0173585 AspS Aspartyl-tRNA synthetase [Translation, riboso 90.26
PRK05159437 aspC aspartyl-tRNA synthetase; Provisional 89.9
PRK06462335 asparagine synthetase A; Reviewed 89.75
TIGR00458428 aspS_arch aspartyl-tRNA synthetase, archaeal type. 89.14
PRK00484491 lysS lysyl-tRNA synthetase; Reviewed 88.96
PRK12820 706 bifunctional aspartyl-tRNA synthetase/aspartyl/glu 88.91
PRK03932450 asnC asparaginyl-tRNA synthetase; Validated 88.64
TIGR00457453 asnS asparaginyl-tRNA synthetase. In a multiple se 87.67
PTZ00425586 asparagine-tRNA ligase; Provisional 86.22
PRK12445505 lysyl-tRNA synthetase; Reviewed 86.11
PTZ00385659 lysyl-tRNA synthetase; Provisional 84.72
PLN02788402 phenylalanine-tRNA synthetase 84.3
TIGR00462304 genX lysyl-tRNA synthetase-like protein GenX. Many 83.96
PLN02850530 aspartate-tRNA ligase 83.04
KOG2411|consensus628 82.92
PLN02502553 lysyl-tRNA synthetase 82.05
PTZ00417585 lysine-tRNA ligase; Provisional 81.75
COG2024536 Phenylalanyl-tRNA synthetase alpha subunit (archae 81.27
PTZ00401550 aspartyl-tRNA synthetase; Provisional 81.16
TIGR00499496 lysS_bact lysyl-tRNA synthetase, eukaryotic and no 80.68
PLN02603565 asparaginyl-tRNA synthetase 80.34
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=7.6e-81  Score=602.76  Aligned_cols=353  Identities=44%  Similarity=0.705  Sum_probs=333.1

Q ss_pred             CeEeeecCCCceEeecCCChHHHHHHHHHhcCCCCCCeeEEEeeceeecCCCCCCCCcceeeeEEEEEcCCCchhhHHHH
Q psy17090          1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAELI   80 (373)
Q Consensus         1 m~~f~D~~~G~~l~LRpD~T~~iaR~~~~~~~~~~~p~k~~y~g~vfR~~~~~~gr~ref~Q~g~eiig~~~~~~d~Evi   80 (373)
                      ||+|.|+ +|+.++||||+|+|+||++++|....+.|.|+||+|+|||+|+||+||+|||+|+|+|+||.+++.+|||+|
T Consensus        66 mY~F~Dk-ggr~laLRpe~Tapv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi  144 (429)
T COG0124          66 MYTFKDK-GGRSLALRPELTAPVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVI  144 (429)
T ss_pred             eEEEEeC-CCCEEEecccCcHHHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHH
Confidence            8999999 999999999999999999999987767899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCceEEEeCCCcChhhHHHH-----HHHHHHHHHhcc----ccccccHHHHHHhhhchhhhhcccChhH
Q psy17090         81 IMCSRLWKNLNLKNICLELNSIGNFNERKKY-----CIDLINYIKKHK----DSKWFCEDIKHSLYLNSLRVLDSKNLII  151 (373)
Q Consensus        81 ~l~~~~l~~lg~~~~~i~i~~~~~~~~~~~~-----~~~l~~~l~~~~----~~~~l~~~~~~~l~~~~~~~l~~~~~~~  151 (373)
                      .++.++|++||+.++.|+|||.|+++.+.++     +..+.+++.+..    +.  |+++++.++..||+++++++.+..
T Consensus       145 ~l~~~~l~~lGi~~~~l~iN~~g~l~~~~~~~gi~~~~~l~~~ldk~~k~~~~~--L~e~~~~r~~~n~lr~ld~k~~~~  222 (429)
T COG0124         145 ALAVEILEALGIGGFTLEINSRGILEGRLEYLGIDQREALLRYLDKLDKIGKLE--LDEDSKRRLKTNPLRVLDSKKDSD  222 (429)
T ss_pred             HHHHHHHHHcCCCcEEEEEcCcccHHHHHHhhcchhHHHHHHHHhhhhhHHHHH--hhhhhhhhhhhchHHHHHhccchH
Confidence            9999999999998899999999999999888     999999998874    45  888888889999999999998878


Q ss_pred             HHHHhhChhhHhhhhHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccceEEEEEeCCCCCccceeccCccchhHHhh
Q psy17090        152 REILINAPKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKF  231 (373)
Q Consensus       152 ~~~l~~~~~l~~~~~~~~~~~l~~l~~~l~~~g~~i~~D~~~~r~~~YYtG~vFe~~~~~~g~~~~ia~GGRYD~L~~~f  231 (373)
                      .+++..+|.+.+.++.+++++++++.++|+.+|+++.+||+++||+|||||+|||++.++.+...+||+|||||+|++.|
T Consensus       223 ~~~~~~ap~i~~~~~~e~~~~~~~v~~~L~~~g~~~~id~~lvRGLDYYtg~VFE~~~~~~~~~~sI~gGGRYD~Lv~~~  302 (429)
T COG0124         223 QELLKNAPELLDYLDEESLEHLEELLALLDALGISYEIDPSLVRGLDYYTGTVFEAVTDGLGAQGSVCGGGRYDGLVEEF  302 (429)
T ss_pred             HHHHhccHHhhhhccHHHHHHHHHHHHHHHHcCCCEEEccceecchhhccceEEEEEEcCCccccceecCccchHHHHHh
Confidence            88999999999988889999999999999999999999999999999999999999999877678999999999999999


Q ss_pred             cCCCCCeeeeechHHHHHHHHHhhcCCCCCCCCceEEEEEcCchhHHHHHHHHHHHHHcCCeEEEEeccCccccCHHHHH
Q psy17090        232 SNKFVPASGFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVFNNIHESFKSQM  311 (373)
Q Consensus       232 ~~~~~pavGfai~le~l~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~la~~Lr~~Gi~v~~~~~~~~~~~sl~~~~  311 (373)
                      +|+++||||||+|+|||+.++...+...+...+++|+|++.+++...+++.+|+.||++|++|++++..    +++++|+
T Consensus       303 gG~~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~la~~LR~~g~~~~~~~~~----r~~k~q~  378 (429)
T COG0124         303 GGKPTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLGEDAEPEALKLAQKLRAAGISVEVDYSG----RKLKKQF  378 (429)
T ss_pred             CCCCCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcCchhHHHHHHHHHHHHHcCCcEEEEecc----ccHHHHH
Confidence            999999999999999999999998753334667999999999887789999999999999999999998    8899999


Q ss_pred             HHHHHcCCCEEEEEccCcccCCeEEEEECCCCCCCCCccceeecHHHHHHHHHHH
Q psy17090        312 KRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLKQISISFKDAENYFYKK  366 (373)
Q Consensus       312 ~~a~~~gi~~~vivg~~e~~~~~v~Vk~l~~~~~~~~~~~~~v~~~el~~~l~~~  366 (373)
                      ++|++.|++|+|++|++|.++|+|+|||+.++      +|..++++++++.++..
T Consensus       379 k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~------eq~~v~~~~~~~~~~~~  427 (429)
T COG0124         379 KYADKLGARFAVILGEDELANGVVTVKDLATG------EQEEVPLDELVEELKEL  427 (429)
T ss_pred             HHHHHCCCCEEEEEcchHHhcCCEEEeeCCCC------ccceecHHHHHHHHHhh
Confidence            99999999999999999999999999999999      99999999999998754

>CHL00201 syh histidine-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02972 Histidyl-tRNA synthetase Back     alignment and domain information
>PLN02530 histidine-tRNA ligase Back     alignment and domain information
>TIGR00442 hisS histidyl-tRNA synthetase Back     alignment and domain information
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12420 histidyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1936|consensus Back     alignment and domain information
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit Back     alignment and domain information
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A Back     alignment and domain information
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain Back     alignment and domain information
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>TIGR00418 thrS threonyl-tRNA synthetase Back     alignment and domain information
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] Back     alignment and domain information
>PRK12444 threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional Back     alignment and domain information
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14799 thrS threonyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1035|consensus Back     alignment and domain information
>PRK09194 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02908 threonyl-tRNA synthetase Back     alignment and domain information
>PRK12325 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II Back     alignment and domain information
>PRK04173 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK03991 threonyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02837 threonine-tRNA ligase Back     alignment and domain information
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I Back     alignment and domain information
>PRK08661 prolyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain Back     alignment and domain information
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type Back     alignment and domain information
>PLN02734 glycyl-tRNA synthetase Back     alignment and domain information
>KOG1637|consensus Back     alignment and domain information
>PRK14894 glycyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG2324|consensus Back     alignment and domain information
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis Back     alignment and domain information
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain Back     alignment and domain information
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria Back     alignment and domain information
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain Back     alignment and domain information
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain Back     alignment and domain information
>PRK14938 Ser-tRNA(Thr) hydrolase; Provisional Back     alignment and domain information
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea Back     alignment and domain information
>PF12745 HGTP_anticodon2: Anticodon binding domain of tRNAs; InterPro: IPR024435 This is an anticodon binding domain, found largely on Gcn2 proteins which bind tRNA to down regulate translation in certain stress situations [] Back     alignment and domain information
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) Back     alignment and domain information
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes Back     alignment and domain information
>cd02426 Pol_gamma_b_Cterm C-terminal domain of mitochondrial DNA polymerase gamma B subunit, which is required for processivity Back     alignment and domain information
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>TIGR02367 PylS pyrrolysyl-tRNA synthetase Back     alignment and domain information
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional Back     alignment and domain information
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain Back     alignment and domain information
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional Back     alignment and domain information
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain Back     alignment and domain information
>KOG2298|consensus Back     alignment and domain information
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain Back     alignment and domain information
>cd00770 SerRS_core Seryl-tRNA synthetase (SerRS) class II core catalytic domain Back     alignment and domain information
>TIGR00414 serS seryl-tRNA synthetase Back     alignment and domain information
>KOG4163|consensus Back     alignment and domain information
>PRK05431 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK09350 poxB regulator PoxA; Provisional Back     alignment and domain information
>cd00496 PheRS_alpha_core Phenylalanyl-tRNA synthetase (PheRS) alpha chain catalytic core domain Back     alignment and domain information
>PRK00960 seryl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00669 Asp_Lys_Asn_RS_core Asp_Lys_Asn_tRNA synthetase class II core domain Back     alignment and domain information
>PF01409 tRNA-synt_2d: tRNA synthetases class II core domain (F); InterPro: IPR002319 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02853 Probable phenylalanyl-tRNA synthetase alpha chain Back     alignment and domain information
>PLN02320 seryl-tRNA synthetase Back     alignment and domain information
>TIGR00470 sepS O-phosphoseryl-tRNA(Cys) synthetase Back     alignment and domain information
>PLN02678 seryl-tRNA synthetase Back     alignment and domain information
>TIGR00468 pheS phenylalanyl-tRNA synthetase, alpha subunit Back     alignment and domain information
>cd00777 AspRS_core Asp tRNA synthetase (aspRS) class II core domain Back     alignment and domain information
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated Back     alignment and domain information
>TIGR00415 serS_MJ seryl-tRNA synthetase, Methanococcus jannaschii family Back     alignment and domain information
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09616 pheT phenylalanyl-tRNA synthetase subunit beta; Reviewed Back     alignment and domain information
>cd00776 AsxRS_core Asx tRNA synthetase (AspRS/AsnRS) class II core domain Back     alignment and domain information
>TIGR00459 aspS_bact aspartyl-tRNA synthetase, bacterial type Back     alignment and domain information
>PRK00476 aspS aspartyl-tRNA synthetase; Validated Back     alignment and domain information
>PF00152 tRNA-synt_2: tRNA synthetases class II (D, K and N) ; InterPro: IPR004364 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02903 aminoacyl-tRNA ligase Back     alignment and domain information
>cd00775 LysRS_core Lys_tRNA synthetase (LysRS) class II core domain Back     alignment and domain information
>KOG2784|consensus Back     alignment and domain information
>COG0172 SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06253 O-phosphoseryl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00769 PheRS_beta_core Phenylalanyl-tRNA synthetase (PheRS) beta chain core domain Back     alignment and domain information
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK06462 asparagine synthetase A; Reviewed Back     alignment and domain information
>TIGR00458 aspS_arch aspartyl-tRNA synthetase, archaeal type Back     alignment and domain information
>PRK00484 lysS lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12820 bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional Back     alignment and domain information
>PRK03932 asnC asparaginyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00457 asnS asparaginyl-tRNA synthetase Back     alignment and domain information
>PTZ00425 asparagine-tRNA ligase; Provisional Back     alignment and domain information
>PRK12445 lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00385 lysyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02788 phenylalanine-tRNA synthetase Back     alignment and domain information
>TIGR00462 genX lysyl-tRNA synthetase-like protein GenX Back     alignment and domain information
>PLN02850 aspartate-tRNA ligase Back     alignment and domain information
>KOG2411|consensus Back     alignment and domain information
>PLN02502 lysyl-tRNA synthetase Back     alignment and domain information
>PTZ00417 lysine-tRNA ligase; Provisional Back     alignment and domain information
>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00401 aspartyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00499 lysS_bact lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial Back     alignment and domain information
>PLN02603 asparaginyl-tRNA synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
4e51_A467 Crystal Structure Of A Histidyl-Trna Synthetase His 1e-106
2el9_A431 Crystal Structure Of E.Coli Histidyl-Trna Synthetas 5e-87
1kmm_A424 Histidyl-Trna Synthetase Complexed With Histidyl-Ad 5e-87
1htt_A423 Histidyl-Trna Synthetase Length = 423 7e-87
1adj_A421 Histidyl-Trna Synthetase In Complex With Histidine 4e-56
1qe0_A420 Crystal Structure Of Apo S. Aureus Histidyl-Trna Sy 3e-49
1wu7_A434 Crystal Structure Of Histidyl-Trna Synthetase From 4e-22
3hrk_A456 Histidyl-Trna Synthetase From Trypanosoma Cruzi (Hi 3e-15
3net_A465 Crystal Structure Of Histidyl-Trna Synthetase From 5e-15
3od1_A400 The Crystal Structure Of An Atp Phosphoribosyltrans 1e-14
3hri_A456 Histidyl-Trna Synthetase (Apo) From Trypanosoma Bru 7e-14
4g84_A464 Crystal Structure Of Human Hisrs Length = 464 4e-09
4g85_A517 Crystal Structure Of Human Hisrs Length = 517 5e-09
1z7m_A344 Atp Phosphoribosyl Transferase (hiszg Atp-prtase) F 1e-07
3rac_A373 Crystal Strucutre Of Histidine--Trna Ligase Subunit 5e-06
>pdb|4E51|A Chain A, Crystal Structure Of A Histidyl-Trna Synthetase Hisrs From Burkholderia Thailandensis Bound To Histidine Length = 467 Back     alignment and structure 
Iteration: 1

 Score =  380 bits (976), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 173/315 (54%), Positives = 232/315 (73%), Gaps = 7/315 (2%)
Query: 1   MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
           MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 94  MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 153
Query: 61  YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
           +Q+GVEA+GF GPD DAE+++MC RLW++L L  I LE+NS+G   ER  + ++LI Y++
Sbjct: 154 HQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 213
Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
           +H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S  HF G+Q++L
Sbjct: 214 QHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLL 271
Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
             NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++   K   A G
Sbjct: 272 KANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 331
Query: 241 FAIGIERLIELIKKININHNFSHQ--CDIYIVHVGKEAELKAFVLSENLRTLGLKVILNC 298
           +A+GIER++EL+K+    H    Q   D+Y+VH G  A  +AF+++E LR  GL VIL+C
Sbjct: 332 WAMGIERILELLKE---EHLVPEQEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHC 388
Query: 299 VFNNIHESFKSQMKR 313
             +    SFKSQMKR
Sbjct: 389 SADGAGASFKSQMKR 403
>pdb|2EL9|A Chain A, Crystal Structure Of E.Coli Histidyl-Trna Synthetase Complexed With A Histidyl-Adenylate Analogue Length = 431 Back     alignment and structure
>pdb|1KMM|A Chain A, Histidyl-Trna Synthetase Complexed With Histidyl-Adenylate Length = 424 Back     alignment and structure
>pdb|1HTT|A Chain A, Histidyl-Trna Synthetase Length = 423 Back     alignment and structure
>pdb|1ADJ|A Chain A, Histidyl-Trna Synthetase In Complex With Histidine Length = 421 Back     alignment and structure
>pdb|1QE0|A Chain A, Crystal Structure Of Apo S. Aureus Histidyl-Trna Synthetase Length = 420 Back     alignment and structure
>pdb|1WU7|A Chain A, Crystal Structure Of Histidyl-Trna Synthetase From Thermoplasma Acidophilum Length = 434 Back     alignment and structure
>pdb|3HRK|A Chain A, Histidyl-Trna Synthetase From Trypanosoma Cruzi (Histidyl-Adenylate Complex) Length = 456 Back     alignment and structure
>pdb|3NET|A Chain A, Crystal Structure Of Histidyl-Trna Synthetase From Nostoc Sp. Pcc 7120 Length = 465 Back     alignment and structure
>pdb|3OD1|A Chain A, The Crystal Structure Of An Atp Phosphoribosyltransferase Regulatory SubunitHISTIDYL-Trna Synthetase From Bacillus Halodurans C Length = 400 Back     alignment and structure
>pdb|3HRI|A Chain A, Histidyl-Trna Synthetase (Apo) From Trypanosoma Brucei Length = 456 Back     alignment and structure
>pdb|4G84|A Chain A, Crystal Structure Of Human Hisrs Length = 464 Back     alignment and structure
>pdb|4G85|A Chain A, Crystal Structure Of Human Hisrs Length = 517 Back     alignment and structure
>pdb|1Z7M|A Chain A, Atp Phosphoribosyl Transferase (hiszg Atp-prtase) From Lactococcus Lactis Length = 344 Back     alignment and structure
>pdb|3RAC|A Chain A, Crystal Strucutre Of Histidine--Trna Ligase Subunit From Alicyclobacillus Acidocaldarius Subsp. Acidocaldarius Dsm 446 Length = 373 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
4e51_A467 Histidine--tRNA ligase; seattle structural genomic 0.0
1htt_A423 Histidyl-tRNA synthetase; complex (tRNA synthetase 1e-177
1qe0_A420 Histidyl-tRNA synthetase; class II tRNA synthetase 1e-175
1h4v_B421 Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA 1e-174
1wu7_A434 Histidyl-tRNA synthetase; ligase, structural genom 1e-134
1z7m_A344 ATP phosphoribosyltransferase regulatory subunit; 1e-122
3od1_A400 ATP phosphoribosyltransferase regulatory subunit; 2e-97
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 2e-96
3rac_A373 Histidine-tRNA ligase; structural genomics, PSI-bi 1e-77
3net_A465 Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas 2e-62
1usy_A275 ATP phosphoribosyltransferase regulatory subunit; 3e-52
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 6e-26
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} Length = 467 Back     alignment and structure
 Score =  516 bits (1332), Expect = 0.0
 Identities = 189/374 (50%), Positives = 261/374 (69%), Gaps = 4/374 (1%)

Query: 1   MYSFIDELNGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQF 60
           MYSF+D LNG+NL+LRPE TA+V+R+ IE+N++YDGPKRLWY GPMFRHERPQ GRYRQF
Sbjct: 94  MYSFVDALNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQF 153

Query: 61  YQIGVEAIGFPGPDIDAELIIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIK 120
           +Q+GVEA+GF GPD DAE+++MC RLW++L L  I LE+NS+G   ER  + ++LI Y++
Sbjct: 154 HQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLE 213

Query: 121 KHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKIL 180
           +H D     +D +  LY N LRVLD+KN  ++EI+ NAPKL+D+L   S  HF G+Q++L
Sbjct: 214 QHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAPKLIDFLGDVSRAHFEGLQRLL 271

Query: 181 NYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASG 240
             NN+ + IN +LVRG+DYYN TVFEW TDKLG+Q ++  GGRYD LI++   K   A G
Sbjct: 272 KANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACG 331

Query: 241 FAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCVF 300
           +A+GIER++EL+K+ ++        D+Y+VH G  A  +AF+++E LR  GL VIL+C  
Sbjct: 332 WAMGIERILELLKEEHLVPE-QEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSA 390

Query: 301 NNIHESFKSQMKRANASNANFAAIIGENEIINNTLIIKDLRNKYEDPTLK-QISISFKDA 359
           +    SFKSQMKRA+AS A FA I GE+E+ N T  +K LR   +D     Q S+  +  
Sbjct: 391 DGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESL 450

Query: 360 ENYFYKKIIKNINN 373
             +    ++    +
Sbjct: 451 TEFLINAMVATAED 464
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* Length = 423 Back     alignment and structure
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 Length = 420 Back     alignment and structure
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A Length = 421 Back     alignment and structure
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 Back     alignment and structure
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* Length = 344 Back     alignment and structure
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Length = 400 Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 Back     alignment and structure
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Length = 373 Back     alignment and structure
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 Back     alignment and structure
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Length = 275 Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* Length = 290 Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
4e51_A467 Histidine--tRNA ligase; seattle structural genomic 100.0
1h4v_B421 Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA 100.0
1htt_A423 Histidyl-tRNA synthetase; complex (tRNA synthetase 100.0
3lc0_A456 Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t 100.0
3net_A465 Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas 100.0
4g85_A517 Histidine-tRNA ligase, cytoplasmic; synthetase; 3. 100.0
4g84_A464 Histidine--tRNA ligase, cytoplasmic; synthetase; 2 100.0
1wu7_A434 Histidyl-tRNA synthetase; ligase, structural genom 100.0
1qe0_A420 Histidyl-tRNA synthetase; class II tRNA synthetase 100.0
3od1_A400 ATP phosphoribosyltransferase regulatory subunit; 100.0
3rac_A373 Histidine-tRNA ligase; structural genomics, PSI-bi 100.0
1z7m_A344 ATP phosphoribosyltransferase regulatory subunit; 100.0
1usy_A275 ATP phosphoribosyltransferase regulatory subunit; 100.0
2j3l_A572 Prolyl-tRNA synthetase; class II aminoacyl- T synt 100.0
1evl_A401 Threonyl-tRNA synthetase; amino acid recognition, 100.0
2i4l_A458 Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud 100.0
3a32_A471 Probable threonyl-tRNA synthetase 1; aeropyrum per 100.0
1nyr_A645 Threonyl-tRNA synthetase 1; ATP, threonine, ligase 100.0
1qf6_A642 THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m 100.0
3uh0_A460 Threonyl-tRNA synthetase, mitochondrial; threonine 100.0
1hc7_A477 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 100.0
1nj8_A459 Proline-tRNA synthetase, proline--tRNA ligase; cla 100.0
2zt5_A693 Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP 100.0
1nj1_A501 PROR, proline-tRNA synthetase, proline--tRNA ligas 100.0
1ati_A505 Glycyl-tRNA synthetase; protein biosynthesis, liga 99.96
4hvc_A 519 Bifunctional glutamate/proline--tRNA ligase; ligas 99.94
3ial_A 518 Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, 99.92
1g5h_A454 Mitochondrial DNA polymerase accessory subunit; in 99.81
3ikl_A459 DNA polymerase subunit gamma-2, mitochondrial; tra 99.8
1v95_A130 Nuclear receptor coactivator 5; coactivator indepe 99.47
3dsq_A288 Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t 99.27
2dq3_A425 Seryl-tRNA synthetase; coiled-coil, homodimer, str 99.15
1nnh_A294 Asparaginyl-tRNA synthetase-related peptide; struc 99.05
3qtc_A290 Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet 98.92
2dq0_A455 Seryl-tRNA synthetase; coiled-coil, homodimer, str 98.92
1ses_A421 Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A 98.88
2cja_A522 Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE 98.68
3vbb_A522 Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l 98.53
1wle_A501 Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo 98.47
3lss_A484 Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, 98.28
3qne_A485 Seryl-tRNA synthetase, cytoplasmic; amino acid bio 98.14
3err_A536 Fusion protein of microtubule binding domain from 98.09
1x54_A434 Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe 98.08
3l4g_A508 Phenylalanyl-tRNA synthetase alpha chain; aminoacy 98.05
2du3_A534 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 97.9
1wyd_A429 Hypothetical aspartyl-tRNA synthetase; archaea, LI 97.82
1n9w_A422 Aspartyl-tRNA synthetase 2; biosynthetic protein; 97.8
3mf2_A346 BLL0957 protein; aminoacyl-tRNA synthetase, seryl- 97.8
1eov_A487 ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy 97.58
2du7_A549 O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l 97.05
3a74_A493 Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, 97.03
1b7y_A350 Phers, protein (phenylalanyl-tRNA synthetase); enz 96.52
2odr_B648 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 96.44
1e1o_A504 Lysyl-tRNA synthetase, heat inducible; ligase, ami 96.43
2odr_A 665 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 96.42
2odr_D 685 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 96.42
2odr_C 701 Phosphoseryl-tRNA synthetase; phosphoserine tRNA s 96.34
2rhq_A294 Phenylalanyl-tRNA synthetase alpha chain; heterote 96.07
3a5y_A345 GENX, putative lysyl-tRNA synthetase; aminoacyl-tR 95.54
2xgt_A435 Asparaginyl-tRNA synthetase, cytoplasmic; ligase, 95.3
3ica_A213 Phenylalanyl-tRNA synthetase beta chain; APC61692. 95.24
3nem_A438 Aspartyl-tRNA synthetase; rossmann fold, OB fold, 95.09
3ig2_A213 Phenylalanyl-tRNA synthetase beta chain; phers, MC 94.95
3l4g_B589 Phenylalanyl-tRNA synthetase beta chain; aminoacyl 94.26
2rhq_B795 Phenylalanyl-tRNA synthetase beta chain; heterotet 93.69
1c0a_A585 Aspartyl tRNA synthetase; protein-RNA complex, lig 92.26
1l0w_A580 Aspartyl-tRNA synthetase; space-grown crystal, dim 92.1
3m4p_A456 Ehasnrs, asparaginyl-tRNA synthetase, putative; am 91.9
3pco_A327 Phenylalanyl-tRNA synthetase, alpha subunit; amino 91.76
4ah6_A617 Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo 91.58
1b7y_B785 Phers, protein (phenylalanyl-tRNA synthetase); enz 91.29
4ex5_A529 Lysine--tRNA ligase; structural genomics, niaid, n 89.95
3bju_A521 Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, 89.79
3i7f_A548 Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi 86.29
3pco_B795 Phenylalanyl-tRNA synthetase, beta chain; aminoacy 86.02
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} Back     alignment and structure
Probab=100.00  E-value=4.2e-71  Score=550.94  Aligned_cols=359  Identities=52%  Similarity=0.911  Sum_probs=321.8

Q ss_pred             CeEeeecCC-CceEeecCCChHHHHHHHHHhcCCCCCCeeEEEeeceeecCCCCCCCCcceeeeEEEEEcCCCchhhHHH
Q psy17090          1 MYSFIDELN-GDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAEL   79 (373)
Q Consensus         1 m~~f~D~~~-G~~l~LRpD~T~~iaR~~~~~~~~~~~p~k~~y~g~vfR~~~~~~gr~ref~Q~g~eiig~~~~~~d~Ev   79 (373)
                      ||+|.|+ + |+.++||||+|+|+||+++++......|+|+||+|+|||+++|+.||+|||+|+|+|+||.+++.+|+|+
T Consensus        94 my~~~D~-~~g~~l~LRPd~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~~~~adaEv  172 (467)
T 4e51_A           94 MYSFVDA-LNGENLTLRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEI  172 (467)
T ss_dssp             CCEEECT-TTCCEEEECSCSHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCCCSHHHHHH
T ss_pred             eEEEecC-CCCCEEEeCcccHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCCChHHHHHH
Confidence            8999999 8 9999999999999999999876544689999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCceEEEeCCCcChhhHHHHHHHHHHHHHhccccccccHHHHHHhhhchhhhhcccChhHHHHHhhCh
Q psy17090         80 IIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILINAP  159 (373)
Q Consensus        80 i~l~~~~l~~lg~~~~~i~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~l~~~~  159 (373)
                      |.++.++|+.||++++.|+|||.|+++++..++..|.+++.+..+.  |++++.+++..+|++++|++++.+.+++..+|
T Consensus       173 i~l~~~~l~~lGl~~~~i~in~~g~~~~~~~~~~~l~~~l~~~~~~--l~~~~~~~l~~~~l~~ld~k~~~~~~~l~~a~  250 (467)
T 4e51_A          173 VMMCQRLWEDLGLTGIKLEINSLGLAEERAAHRVELIKYLEQHADK--LDDDAQRRLYTNPLRVLDTKNPALQEIVRNAP  250 (467)
T ss_dssp             HHHHHHHHHHHTCCCEEEEEEECCCHHHHHHHHHHHHHHHHTTGGG--CCHHHHHHHTTCTHHHHTCCCGGGHHHHHTSC
T ss_pred             HHHHHHHHHHcCCCceEEEEeCCCchhhhHHHHHHHHHHHHHHHhc--cCHHHHHHHHhchHHHhhccchhHHHHHhhhH
Confidence            9999999999999889999999999998888899999999876555  89999999999999999999888899999999


Q ss_pred             hhHhhhhHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccceEEEEEeCCCCCccceeccCccchhHHhhcCCCCCee
Q psy17090        160 KLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPAS  239 (373)
Q Consensus       160 ~l~~~~~~~~~~~l~~l~~~l~~~g~~i~~D~~~~r~~~YYtG~vFe~~~~~~g~~~~ia~GGRYD~L~~~f~~~~~pav  239 (373)
                      .+.+.++.+++++++.+.++|+.+|+++.|||+++|+++||||+||+++.++.|...+|++|||||+|++.|++++.|||
T Consensus       251 ~l~~~l~~~~~~~l~~l~~~L~~~gi~~~~d~~lvRgl~YYtg~vFe~~~~~~g~~~tI~~GGRYD~Lv~~~g~~~~Pav  330 (467)
T 4e51_A          251 KLIDFLGDVSRAHFEGLQRLLKANNVPFTINPRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAAC  330 (467)
T ss_dssp             CGGGGCCHHHHHHHHHHHHHHHHTTCCEEECTTCCCSCTTCCSEEEEEEECC----CEEEEEEECTHHHHHTTSSCCCEE
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHcCCeEEEcCccccCccccCCeEEEEEECCCCCcceecCCCcHHHHHHHhCCCCCCce
Confidence            99888888899999999999999999999999999999999999999999876655799999999999999998899999


Q ss_pred             eeechHHHHHHHHHhhcCCCCCCCCceEEEEEcCchhHHHHHHHHHHHHHcCCeEEEEec----cCccccCHHHHHHHHH
Q psy17090        240 GFAIGIERLIELIKKININHNFSHQCDIYIVHVGKEAELKAFVLSENLRTLGLKVILNCV----FNNIHESFKSQMKRAN  315 (373)
Q Consensus       240 Gfai~le~l~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~la~~Lr~~Gi~v~~~~~----~~~~~~sl~~~~~~a~  315 (373)
                      ||++++|||+.++.+.+.+|. .++++|+|++.++.....+.++++.||++|++|++++.    +    .++++++++|+
T Consensus       331 Gfa~gleRl~~~l~~~~~~~~-~~p~~V~Vip~~~~~~~~A~~ia~~LR~~Gi~ve~d~~~~~~~----~sl~kq~~~A~  405 (467)
T 4e51_A          331 GWAMGIERILELLKEEHLVPE-QEGVDVYVVHQGDAAREQAFIVAERLRDTGLDVILHCSADGAG----ASFKSQMKRAD  405 (467)
T ss_dssp             EEEEEHHHHHHHHHHTTCCCC-CCCCSEEEEECSHHHHHHHHHHHHHHHHTTCCEEECCCTTSSC----CCHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHhcCCccc-CCCCeEEEEEcChHHHHHHHHHHHHHHHcCCeEEEEccccccc----CCHHHHHHHHH
Confidence            999999999999988775432 56789999999888888999999999999999999988    6    89999999999


Q ss_pred             HcCCCEEEEEccCcccCCeEEEEECCC-CCCCCCccceeecHHHHHHHHHHHH
Q psy17090        316 ASNANFAAIIGENEIINNTLIIKDLRN-KYEDPTLKQISISFKDAENYFYKKI  367 (373)
Q Consensus       316 ~~gi~~~vivg~~e~~~~~v~Vk~l~~-~~~~~~~~~~~v~~~el~~~l~~~~  367 (373)
                      +.|+||+|+||++|+++|+|+||++.+ +.++++.+|..|+++|++++|++.+
T Consensus       406 ~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~  458 (467)
T 4e51_A          406 ASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM  458 (467)
T ss_dssp             HTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred             HcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence            999999999999999999999999998 5334455789999999999999887
>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A Back     alignment and structure
>1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* Back     alignment and structure
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Back     alignment and structure
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Back     alignment and structure
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} Back     alignment and structure
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} Back     alignment and structure
>1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 Back     alignment and structure
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Back     alignment and structure
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* Back     alignment and structure
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Back     alignment and structure
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* Back     alignment and structure
>1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* Back     alignment and structure
>2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* Back     alignment and structure
>3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A Back     alignment and structure
>1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* Back     alignment and structure
>1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 Back     alignment and structure
>3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* Back     alignment and structure
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A Back     alignment and structure
>1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 Back     alignment and structure
>2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A Back     alignment and structure
>1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* Back     alignment and structure
>1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* Back     alignment and structure
>4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} Back     alignment and structure
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} Back     alignment and structure
>1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* Back     alignment and structure
>3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} Back     alignment and structure
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 Back     alignment and structure
>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Back     alignment and structure
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} Back     alignment and structure
>1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Back     alignment and structure
>3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* Back     alignment and structure
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A Back     alignment and structure
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A Back     alignment and structure
>2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A Back     alignment and structure
>3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} Back     alignment and structure
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} Back     alignment and structure
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* Back     alignment and structure
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A Back     alignment and structure
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A Back     alignment and structure
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Back     alignment and structure
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* Back     alignment and structure
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Back     alignment and structure
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Back     alignment and structure
>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* Back     alignment and structure
>1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Back     alignment and structure
>2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} Back     alignment and structure
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Back     alignment and structure
>1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* Back     alignment and structure
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A Back     alignment and structure
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} Back     alignment and structure
>2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* Back     alignment and structure
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* Back     alignment and structure
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Back     alignment and structure
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} Back     alignment and structure
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Back     alignment and structure
>3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} Back     alignment and structure
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Back     alignment and structure
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* Back     alignment and structure
>1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* Back     alignment and structure
>1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A Back     alignment and structure
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Back     alignment and structure
>3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} Back     alignment and structure
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* Back     alignment and structure
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} Back     alignment and structure
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} Back     alignment and structure
>3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Back     alignment and structure
>3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 373
d1kmma2322 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisR 5e-53
d1qe0a2325 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisR 4e-49
d1h4vb2324 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisR 2e-47
d1usya_275 d.104.1.1 (A:) ATP phosphoribosyltransferase regul 2e-41
d1z7ma1318 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase 2e-32
d1wu7a2327 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisR 4e-32
d1kmma199 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (His 3e-12
d1qe0a195 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (His 2e-10
d1wu7a197 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (His 3e-09
d1h4vb196 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (His 3e-09
d1b8aa2335 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (As 5e-07
d1l0wa3356 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synt 0.003
d1c0aa3346 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synt 0.004
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Length = 322 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Histidyl-tRNA synthetase (HisRS)
species: Escherichia coli [TaxId: 562]

 Score =  176 bits (446), Expect = 5e-53
 Identities = 127/250 (50%), Positives = 177/250 (70%), Gaps = 3/250 (1%)

Query: 9   NGDNLSLRPEGTASVIRSVIENNLIYDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAI 68
           NGD+L+LRPEGTA  +R+ IE+ L+Y+  +RLWY GPMFRHERPQ GRYRQF+Q+G E  
Sbjct: 71  NGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVF 130

Query: 69  GFPGPDIDAELIIMCSRLWKNLNLKNICLEL-NSIGNFNERKKYCIDLINYIKKHKDSKW 127
           G  GPDIDAELI++ +R W+ L +        NSIG+   R  Y   L+ ++++HK+   
Sbjct: 131 GLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKE--K 188

Query: 128 FCEDIKHSLYLNSLRVLDSKNLIIREILINAPKLLDYLEKDSLDHFYGIQKILNYNNISY 187
             ED K  +Y N LRVLDSKN  ++ +L +AP L DYL+++S +HF G+ K+L    I+Y
Sbjct: 189 LDEDCKRRMYTNPLRVLDSKNPEVQALLNDAPALGDYLDEESREHFAGLCKLLESAGIAY 248

Query: 188 KINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVPASGFAIGIER 247
            +N +LVRG+DYYNRTVFEW T+ LGSQ ++C GGRYD L+++   +  PA GFA+G+ER
Sbjct: 249 TVNQRLVRGLDYYNRTVFEWVTNSLGSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLER 308

Query: 248 LIELIKKINI 257
           L+ L++ +N 
Sbjct: 309 LVLLVQAVNP 318
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Length = 325 Back     information, alignment and structure
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Length = 324 Back     information, alignment and structure
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Length = 275 Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Length = 318 Back     information, alignment and structure
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 327 Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Length = 99 Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Length = 95 Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 97 Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 96 Back     information, alignment and structure
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Length = 335 Back     information, alignment and structure
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Length = 356 Back     information, alignment and structure
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Length = 346 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
d1h4vb2324 Histidyl-tRNA synthetase (HisRS) {Thermus thermoph 100.0
d1kmma2322 Histidyl-tRNA synthetase (HisRS) {Escherichia coli 100.0
d1qe0a2325 Histidyl-tRNA synthetase (HisRS) {Staphylococcus a 100.0
d1z7ma1318 ATP phosphoribosyltransferase regulatory subunit H 100.0
d1wu7a2327 Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop 100.0
d1usya_275 ATP phosphoribosyltransferase regulatory subunit H 100.0
d1qf6a1110 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.78
d1nyra1113 Threonyl-tRNA synthetase (ThrRS), C-terminal domai 99.75
d1kmma199 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.72
d1wu7a197 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.72
d1h4vb196 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.69
d1qe0a195 Histidyl-tRNA synthetase (HisRS), C-terminal domai 99.69
d1nj1a1127 Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me 99.63
d1g5ha1127 The aaRS-like accessory subunit of mitochondrial p 99.57
d1nj8a1126 Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M 99.54
d1atia1111 Glycyl-tRNA synthetase (GlyRS), C-terminal domain 99.51
d1hc7a1127 Prolyl-tRNA synthetase (ProRS) domain {Thermus the 99.48
d1nyra4291 Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a 98.67
d1qf6a4291 Threonyl-tRNA synthetase (ThrRS) {Escherichia coli 98.61
d1nj8a3268 Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc 98.53
d1nj1a3265 Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth 98.46
d1b76a2331 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 98.15
d1v95a_130 Nuclear receptor coactivator 5 (KIAA1637) {Human ( 98.12
d1hc7a2272 Prolyl-tRNA synthetase (ProRS) {Thermus thermophil 97.87
d1g5ha2290 The aaRS-like accessory subunit of mitochondrial p 97.68
d1atia2394 Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil 96.92
d1jjca_266 Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS 96.47
d1seta2311 Seryl-tRNA synthetase (SerRS) {Thermus thermophilu 96.01
d1c0aa3346 Aspartyl-tRNA synthetase (AspRS) {Escherichia coli 92.34
d1e1oa2342 Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g 91.53
d1eova2353 Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S 90.29
d1nnha_293 Hypothetical protein PF1951 {Archaeon Pyrococcus f 89.94
d1l0wa3356 Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph 87.1
d1b8aa2335 Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ 85.83
>d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Histidyl-tRNA synthetase (HisRS)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.9e-50  Score=381.22  Aligned_cols=254  Identities=38%  Similarity=0.699  Sum_probs=201.1

Q ss_pred             CeEeeecCCCceEeecCCChHHHHHHHHHhcCC-CCCCeeEEEeeceeecCCCCCCCCcceeeeEEEEEcCCCchhhHHH
Q psy17090          1 MYSFIDELNGDNLSLRPEGTASVIRSVIENNLI-YDGPKRLWYSGPMFRHERPQYGRYRQFYQIGVEAIGFPGPDIDAEL   79 (373)
Q Consensus         1 m~~f~D~~~G~~l~LRpD~T~~iaR~~~~~~~~-~~~p~k~~y~g~vfR~~~~~~gr~ref~Q~g~eiig~~~~~~d~Ev   79 (373)
                      ||+|.|+ +|+.++||||+|+|+||+++++... .+.|+|+||+|+|||+++++.||.|||+|+|+|+||.++..+|+|+
T Consensus        64 ~~~~~d~-~g~~l~LRpD~T~~iar~~~~~~~~~~~~p~r~~Y~g~VfR~~~~~~gr~re~~Q~g~EiiG~~~~~ad~Ei  142 (324)
T d1h4vb2          64 MFTFQDR-GGRSLTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEA  142 (324)
T ss_dssp             SCEEECT-TSCEEEECCCSHHHHHHHHHHTTGGGSSSSEEEEEEEEEECCCCC----CCEEEEEEEEEESCCCHHHHHHH
T ss_pred             Hhhhhcc-CCcccccccccccHHHHHHHHhhhhhhchhhhheeeCcccccCcccCCCcceeccccccccCCCChHHHHHH
Confidence            6899999 9999999999999999998865432 3579999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCceEEEeCCCcChhhHHHHHHHHHHHHHhccccccccHHHHHHhhhchhhhhcccChhHHHHHhh--
Q psy17090         80 IIMCSRLWKNLNLKNICLELNSIGNFNERKKYCIDLINYIKKHKDSKWFCEDIKHSLYLNSLRVLDSKNLIIREILIN--  157 (373)
Q Consensus        80 i~l~~~~l~~lg~~~~~i~i~~~~~~~~~~~~~~~l~~~l~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~l~~--  157 (373)
                      |.++.++++.+|++++.+.|+|.++............+.+......  +..+...++..+++...+...+....+++.  
T Consensus       143 i~l~~~~l~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~~~  220 (324)
T d1h4vb2         143 VVLLYECLKELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREA--LSEDSKERLEENPMRILDSKSERDQALLKELG  220 (324)
T ss_dssp             HHHHHHHHHHTTCCSCEEEEEECCCHHHHHHHHHHHHHHHGGGGGG--SCHHHHHHHHHCGGGGGGCCCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcccCcceeeeccCchhHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHhhhhhhhhhhhHHHHHHHHhhc
Confidence            9999999999999999999999998876543333223333322222  344555556555554454444444455443  


Q ss_pred             ChhhHhhhhHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccceEEEEEeCCCCCccceeccCccchhHHhhcCCCCC
Q psy17090        158 APKLLDYLEKDSLDHFYGIQKILNYNNISYKINTKLVRGMDYYNRTVFEWTTDKLGSQNSICGGGRYDFLIKKFSNKFVP  237 (373)
Q Consensus       158 ~~~l~~~~~~~~~~~l~~l~~~l~~~g~~i~~D~~~~r~~~YYtG~vFe~~~~~~g~~~~ia~GGRYD~L~~~f~~~~~p  237 (373)
                      .+.+.+.+..+++..++.+...++.+++.+.|||+++|+++||||+||++|+++.|...+||+|||||+|+++|++++.|
T Consensus       221 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~iD~~~~rg~~YYtG~vFe~~~~~~g~~~~i~~GGRYD~L~~~f~~~~~p  300 (324)
T d1h4vb2         221 VRPMLDFLGEEARAHLKEVERHLERLSVPYELEPALVRGLDYYVRTAFEVHHEEIGAQSALGGGGRYDGLSELLGGPRVP  300 (324)
T ss_dssp             CCCGGGGCCHHHHHHHHHHHHHHHHTTCCEEECTTCCCCSTTCEEEEEEEEC------CEEEEEEECTTHHHHTTCCCCC
T ss_pred             CchHHHHHhHHHHHHHHHHHHHHhhcceEEEEccccccCCccccCeEEEEEECCCCccCeeecCCccHHHHHhcCCCCCC
Confidence            33445566678888899999999999999999999999999999999999998766557999999999999999988899


Q ss_pred             eeeeechHHHHHHHHHhhcC
Q psy17090        238 ASGFAIGIERLIELIKKINI  257 (373)
Q Consensus       238 avGfai~le~l~~~l~~~~~  257 (373)
                      |||||+++|||+.++.+.|.
T Consensus       301 AvGfsi~ld~l~~~l~~~g~  320 (324)
T d1h4vb2         301 GVGFAFGVERVALALEAEGF  320 (324)
T ss_dssp             EEEEEEEHHHHHHHHHHTTC
T ss_pred             eEEEEeeHHHHHHHHHhcCC
Confidence            99999999999999999874
>d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} Back     information, alignment and structure
>d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} Back     information, alignment and structure
>d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} Back     information, alignment and structure
>d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Back     information, alignment and structure
>d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Back     information, alignment and structure
>d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure