Psyllid ID: psy17133

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110------
Protein Sequence
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ
Secondary Structure (PSIPRED)
ccccccEEEEEEccccccEEEEEEccccEEEEEcccccEEEEEccccccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEcccccEEEEEEcccEEEEEEcccccEEEEEEcccccccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEEccccEEEEEEccccEEEEEcccc
Coil and Loop (DISEMBL)
mfyngtptsidfvrdESTKMVTAFDnsacvlfdletgkpvvridssqfgvsgggginrvvchptlpltitahddrhirffdnvSGKLVHSMVAHLDAvtslavdpqglyilsgtyq
Flexible Loop (DISEMBL)
mfyngtptsidfvrdESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVtslavdpqglYILSGTYQ
Low Complexity Region (SEG)
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ
Disordered region (IsUnstruct)
**********DFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS****
Disordered Region (DISOPRED)
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY*
Disordered Region (DISEMBL)
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ
Disordered Region (DISPRO)
*FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	116	2.2.26 [Sep-21-2011]
Q9ERG2	796	Striatin-3 OS=Mus musculu	yes	N/A	0.965	0.140	0.566	2e-34
Q13033	797	Striatin-3 OS=Homo sapien	yes	N/A	0.956	0.139	0.587	3e-34
A5D7H2	797	Striatin-3 OS=Bos taurus	yes	N/A	0.956	0.139	0.578	3e-34
P58405	794	Striatin-3 OS=Rattus norv	yes	N/A	0.965	0.141	0.557	3e-34
P70483	780	Striatin OS=Rattus norveg	no	N/A	0.956	0.142	0.508	6e-30
O43815	780	Striatin OS=Homo sapiens	no	N/A	0.956	0.142	0.5	1e-29
O55106	780	Striatin OS=Mus musculus	no	N/A	0.956	0.142	0.517	2e-29
P58404	760	Striatin-4 OS=Mus musculu	no	N/A	0.948	0.144	0.544	2e-29
Q9NRL3	753	Striatin-4 OS=Homo sapien	no	N/A	0.948	0.146	0.535	2e-28
Q54J37	827	Striatin homolog OS=Dicty	yes	N/A	0.913	0.128	0.378	7e-16

>sp|Q9ERG2|STRN3_MOUSE Striatin-3 OS=Mus musculus GN=Strn3 PE=1 SV=1

 Score =  144 bits (362), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/113 (56%), Positives = 88/113 (77%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
           +G PTS+DF+  +   MVT+F+  + V++DLET + +V + S    G+     INRVV H
Sbjct: 630 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 689

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 690 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 742

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.
Mus musculus (taxid: 10090)

>sp|Q13033|STRN3_HUMAN Striatin-3 OS=Homo sapiens GN=STRN3 PE=1 SV=3

 Score =  143 bits (361), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/114 (58%), Positives = 90/114 (78%), Gaps = 3/114 (2%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF--GVSGGGGINRVVC 61
           +G PTS+DF+  +   MVT+F+  + V++DLET + +V I SSQ   G+     INRVV 
Sbjct: 631 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLV-ILSSQVDSGLQSNNHINRVVS 689

Query: 62  HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           HPTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 690 HPTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Homo sapiens (taxid: 9606)

>sp|A5D7H2|STRN3_BOVIN Striatin-3 OS=Bos taurus GN=STRN3 PE=2 SV=1

 Score =  143 bits (361), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/114 (57%), Positives = 90/114 (78%), Gaps = 3/114 (2%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF--GVSGGGGINRVVC 61
           +G PTS+DF+  +   MVT+F+  + V++DLET + +V + SSQ   G+     INRVV 
Sbjct: 631 HGIPTSVDFIGCDPAHMVTSFNTGSTVIYDLETSQSLVML-SSQMDSGLQSSNHINRVVS 689

Query: 62  HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           HPTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 690 HPTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Bos taurus (taxid: 9913)

>sp|P58405|STRN3_RAT Striatin-3 OS=Rattus norvegicus GN=Strn3 PE=2 SV=2

 Score =  143 bits (360), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/113 (55%), Positives = 88/113 (77%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
           +G PTS+DF+  +   MVT+F+  + +++DLET + +V + S    G+     INRVV H
Sbjct: 628 HGIPTSVDFIGCDPAHMVTSFNTGSAIIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 687

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct: 688 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 740

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Rattus norvegicus (taxid: 10116)

>sp|P70483|STRN_RAT Striatin OS=Rattus norvegicus GN=Strn PE=1 SV=1

 Score =  129 bits (323), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/112 (50%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 5   GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCHP 63
           G P S+D V  + + MV +F      +F++ET + ++ ++S+     S    INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDSTASSSCQINRVISHP 674

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Rattus norvegicus (taxid: 10116)

>sp|O43815|STRN_HUMAN Striatin OS=Homo sapiens GN=STRN PE=1 SV=4

 Score =  128 bits (321), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/112 (50%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 5   GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCHP 63
           G P S+D V  + + MV +F      +F++ET + ++ ++S+     +    INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNVDTTANSSCQINRVISHP 674

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726

Calmodulin-binding protein which may function as scaffolding or signaling protein and may play a role in dendritic Ca(2+) signaling.

Homo sapiens (taxid: 9606)

>sp|O55106|STRN_MOUSE Striatin OS=Mus musculus GN=Strn PE=1 SV=2

 Score =  127 bits (318), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/112 (51%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 5   GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCHP 63
           G P S+D V  + + MV +F      +F++ET + V+ ++S+     S    INRV+ HP
Sbjct: 615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRVLTLESNVDSTSSSSCQINRVISHP 674

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct: 675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Mus musculus (taxid: 10090)

>sp|P58404|STRN4_MOUSE Striatin-4 OS=Mus musculus GN=Strn4 PE=1 SV=2

 Score =  127 bits (318), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 2/112 (1%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +G PTS+ F   E   +V +F +   VL+DLE G  ++ ++S   G SG   IN+VV HP
Sbjct: 597 HGIPTSVAFTSTEPAHVVASFRSGDTVLYDLEAGSALLTLESR--GSSGPAQINQVVSHP 654

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           + PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G++++SG++
Sbjct: 655 SQPLTITAHDDRGIRFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSH 706

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Mus musculus (taxid: 10090)

>sp|Q9NRL3|STRN4_HUMAN Striatin-4 OS=Homo sapiens GN=STRN4 PE=1 SV=2

 Score =  124 bits (310), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/112 (53%), Positives = 78/112 (69%), Gaps = 2/112 (1%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +G PTS+ F   E   +V +F +   VL+D+E G  ++ ++S   G SG   IN+VV HP
Sbjct: 590 HGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGSALLTLESR--GSSGPTQINQVVSHP 647

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PLTITAHDDR IRF DN +GK VHSMVAHLDAVT LAVDP G +++SG++
Sbjct: 648 NQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAVTCLAVDPNGAFLMSGSH 699

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Homo sapiens (taxid: 9606)

>sp|Q54J37|STRN_DICDI Striatin homolog OS=Dictyostelium discoideum GN=strn PE=3 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 5/111 (4%)

Query: 7   PTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGG----INRVVC 61
           PTSI     E+  K++T++++ + +LFDLET + + ++       +        IN++V 
Sbjct: 660 PTSIALPATENNRKLLTSYNDGSILLFDLETQQIISQLKQGSSNNNNNNNNNSQINKIVS 719

Query: 62  HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS 112
           HP +PL +T  +D  I FFD  S  +VHSM+AH ++++SL +DP GLYI S
Sbjct: 720 HPFMPLAMTGSEDHKIEFFDLNSNTVVHSMIAHSNSISSLTIDPSGLYIAS 770

Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
242010921	733	Striatin, putative [Pediculus humanus co	0.948	0.150	0.696	6e-41
321475277	684	hypothetical protein DAPPUDRAFT_208467 [	0.956	0.162	0.652	3e-38
270005502	655	hypothetical protein TcasGA2_TC007565 [T	0.965	0.170	0.637	5e-38
189236270	650	PREDICTED: similar to AGAP008755-PA [Tri	0.965	0.172	0.628	2e-37
260787992	725	hypothetical protein BRAFLDRAFT_124920 [	0.965	0.154	0.646	5e-37
241676656	711	striatin, putative [Ixodes scapularis] g	0.965	0.157	0.646	8e-37
427779383	842	Putative cell-cycle nuclear protein [Rhi	0.965	0.133	0.640	1e-35
170033214	648	striatin [Culex quinquefasciatus] gi|167	0.948	0.169	0.610	4e-35
350410641	721	PREDICTED: striatin-3-like isoform 2 [Bo	0.913	0.147	0.616	6e-35
350410638	705	PREDICTED: striatin-3-like isoform 1 [Bo	0.913	0.150	0.616	7e-35

>gi|242010921|ref|XP_002426206.1| Striatin, putative [Pediculus humanus corporis] gi|212510257|gb|EEB13468.1| Striatin, putative [Pediculus humanus corporis]

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 78/112 (69%), Positives = 97/112 (86%), Gaps = 2/112 (1%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +G+PTS+DFVRDE+  +VTAF +S CV+FD ETGKPVVR +++Q  +     INRVVCHP
Sbjct: 570 DGSPTSVDFVRDEANHIVTAFSSSNCVIFDCETGKPVVRFENNQVRIKRL--INRVVCHP 627

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           +LPLTITAH+DRHIRF+DN SGKLVHSMVAHLDAV+SLAVDP GL++LSG++
Sbjct: 628 SLPLTITAHEDRHIRFYDNNSGKLVHSMVAHLDAVSSLAVDPNGLFLLSGSH 679

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321475277|gb|EFX86240.1| hypothetical protein DAPPUDRAFT_208467 [Daphnia pulex]

 Score =  162 bits (410), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 97/115 (84%), Gaps = 4/115 (3%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSG---GGGINRVV 60
           +G PTS+DFVRD+  +MVT+++++AC+LFDLETG+PV R+D+ + GV     G  INRV+
Sbjct: 517 DGIPTSVDFVRDDPNRMVTSYNSAACILFDLETGQPVTRLDTDK-GVEDSVFGRQINRVI 575

Query: 61  CHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            HPTLPLTITAH+DRHIRF+DN +GKL H+MVAHLDAVT LAVDP GLY+LSG++
Sbjct: 576 SHPTLPLTITAHEDRHIRFYDNNTGKLAHAMVAHLDAVTCLAVDPNGLYLLSGSH 630

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270005502|gb|EFA01950.1| hypothetical protein TcasGA2_TC007565 [Tribolium castaneum]

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 72/113 (63%), Positives = 94/113 (83%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS-GGGGINRVVCH 62
           +G P+S+DFVRD+  ++V A+ +S CV++D ET K V+R++SSQ  V+     INR+VCH
Sbjct: 533 DGIPSSVDFVRDQPNRIVAAYASSHCVVYDSETAKSVMRLESSQDSVNPNNKQINRIVCH 592

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLPLTITAH+DRH+RF+DN +GK+VHSMVAHL+AVTSLAVDP GLY+LSG Y
Sbjct: 593 PTLPLTITAHEDRHVRFWDNHTGKMVHSMVAHLEAVTSLAVDPNGLYLLSGKY 645

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189236270|ref|XP_001814737.1| PREDICTED: similar to AGAP008755-PA [Tribolium castaneum]

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/113 (62%), Positives = 95/113 (84%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS-GGGGINRVVCH 62
           +G P+S+DFVRD+  ++V A+ +S CV++D ET K V+R++SSQ  V+     INR+VCH
Sbjct: 484 DGIPSSVDFVRDQPNRIVAAYASSHCVVYDSETAKSVMRLESSQDSVNPNNKQINRIVCH 543

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLPLTITAH+DRH+RF+DN +GK+VHSMVAHL+AVTSLAVDP GLY+LSG++
Sbjct: 544 PTLPLTITAHEDRHVRFWDNHTGKMVHSMVAHLEAVTSLAVDPNGLYLLSGSH 596

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260787992|ref|XP_002589035.1| hypothetical protein BRAFLDRAFT_124920 [Branchiostoma floridae] gi|229274208|gb|EEN45046.1| hypothetical protein BRAFLDRAFT_124920 [Branchiostoma floridae]

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 73/113 (64%), Positives = 93/113 (82%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSG-GGGINRVVCH 62
           +G PTS+DFVR E ++MV A+ +S  VL+DLET +PV ++D+ Q   SG    INRVV H
Sbjct: 559 DGAPTSVDFVRCELSQMVAAYSSSVAVLYDLETAQPVAKLDARQGSDSGVSSQINRVVAH 618

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLP+TITAH+DRHI+FFDN SGK+V++MVAHLDAVTSLAVDP GLY+LSG++
Sbjct: 619 PTLPITITAHEDRHIKFFDNNSGKMVNTMVAHLDAVTSLAVDPNGLYLLSGSH 671

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|241676656|ref|XP_002412565.1| striatin, putative [Ixodes scapularis] gi|215506367|gb|EEC15861.1| striatin, putative [Ixodes scapularis]

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 73/113 (64%), Positives = 91/113 (80%), Gaps = 1/113 (0%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF-GVSGGGGINRVVCH 62
           +G PTS+DFVR +  +M  A+  S CV+ DLETGKPV+R+DS Q  G +    IN VV H
Sbjct: 545 DGIPTSVDFVRSDPGQMAVAYTTSRCVIVDLETGKPVIRLDSDQSPGHALSKQINCVVSH 604

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLP+T+TAH+DRHIRFFDN +GK+VHSMVAHLDAVTSLA+DP GLY+LSG++
Sbjct: 605 PTLPMTVTAHEDRHIRFFDNNTGKMVHSMVAHLDAVTSLAIDPNGLYLLSGSH 657

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427779383|gb|JAA55143.1| Putative cell-cycle nuclear protein [Rhipicephalus pulchellus]

 Score =  153 bits (387), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 2/114 (1%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF--GVSGGGGINRVVC 61
           +GTPTS+DFVR +ST+M  A+  S  V+ DLETGK VVR++S Q     +    IN VV 
Sbjct: 675 DGTPTSVDFVRSDSTQMAVAYTTSRSVIMDLETGKQVVRLESDQNPDASALSKQINCVVS 734

Query: 62  HPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           HPTLP+T+TAH+DRHIRFFDN +GK+VHSMVAHLDAVTSLA+DP GLY+LSG++
Sbjct: 735 HPTLPMTVTAHEDRHIRFFDNNTGKMVHSMVAHLDAVTSLAIDPNGLYLLSGSH 788

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170033214|ref|XP_001844473.1| striatin [Culex quinquefasciatus] gi|167873880|gb|EDS37263.1| striatin [Culex quinquefasciatus]

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/113 (61%), Positives = 95/113 (84%), Gaps = 3/113 (2%)

Query: 5   GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGG--INRVVCH 62
           G PTS+DFVRD+S ++V A+ ++ C+++D ETG+ VV++++SQ  ++G  G  IN+VV H
Sbjct: 483 GVPTSVDFVRDQSDRIVVAYSSTHCIIYDTETGRQVVKLEASQ-EMTGNVGKHINKVVSH 541

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           PTLP+TITAH+DRHIRF+DN +G L+HSMVAHLDAVTSLAVD  GLY+LSG++
Sbjct: 542 PTLPITITAHEDRHIRFWDNTTGSLIHSMVAHLDAVTSLAVDAHGLYLLSGSH 594

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410641|ref|XP_003489100.1| PREDICTED: striatin-3-like isoform 2 [Bombus impatiens]

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/112 (61%), Positives = 89/112 (79%), Gaps = 6/112 (5%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +G PTS+DF+RDES K+V A+D  ACV+FD ETG+ V R+++++       G+NRVV HP
Sbjct: 556 DGIPTSVDFIRDESNKLVVAYDR-ACVVFDTETGESVARLEANE-----TKGVNRVVAHP 609

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           TLPL + AH+DRHIRF+D+ S  L HSMVAHLDAVTSLAVDP GLY+LSG++
Sbjct: 610 TLPLVVAAHEDRHIRFYDHRSATLAHSMVAHLDAVTSLAVDPHGLYLLSGSH 661

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350410638|ref|XP_003489099.1| PREDICTED: striatin-3-like isoform 1 [Bombus impatiens]

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 69/112 (61%), Positives = 89/112 (79%), Gaps = 6/112 (5%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +G PTS+DF+RDES K+V A+D  ACV+FD ETG+ V R+++++       G+NRVV HP
Sbjct: 546 DGIPTSVDFIRDESNKLVVAYDR-ACVVFDTETGESVARLEANE-----TKGVNRVVAHP 599

Query: 64  TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           TLPL + AH+DRHIRF+D+ S  L HSMVAHLDAVTSLAVDP GLY+LSG++
Sbjct: 600 TLPLVVAAHEDRHIRFYDHRSATLAHSMVAHLDAVTSLAVDPHGLYLLSGSH 651

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	116
FB|FBgn0044323	730	Cka "Connector of kinase to AP	0.948	0.150	0.610	1.8e-32
MGI|MGI:2151064	796	Strn3 "striatin, calmodulin bi	0.965	0.140	0.566	2.1e-31
RGD|621827	794	Strn3 "striatin, calmodulin bi	0.965	0.141	0.557	2.7e-31
UNIPROTKB|A5D7H2	797	STRN3 "Striatin-3" [Bos taurus	0.965	0.140	0.566	2.8e-31
UNIPROTKB|F1NH54	811	STRN3 "Uncharacterized protein	0.965	0.138	0.566	2.9e-31
UNIPROTKB|Q13033	797	STRN3 "Striatin-3" [Homo sapie	0.965	0.140	0.566	3.5e-31
ZFIN|ZDB-GENE-070112-1172	782	zgc:158357 "zgc:158357" [Danio	0.956	0.141	0.535	1.6e-27
UNIPROTKB|E1C837	800	STRN "Uncharacterized protein"	0.956	0.138	0.526	2.7e-27
MGI|MGI:1333757	780	Strn "striatin, calmodulin bin	0.956	0.142	0.517	4.2e-27
UNIPROTKB|E1BFB3	780	STRN "Uncharacterized protein"	0.956	0.142	0.5	8.8e-27

FB|FBgn0044323 Cka "Connector of kinase to AP-1" [Drosophila melanogaster (taxid:7227)]

 Score = 363 (132.8 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 69/113 (61%), Positives = 93/113 (82%)

Query:     5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGG--INRVVCH 62
             G P+S+DFVR+E   +V A++++ C+++D ETGK VVR++++Q  +SG  G  IN+VV H
Sbjct:   565 GVPSSVDFVRNEVDHIVVAYNSAHCIVYDTETGKQVVRLEAAQ-EMSGNTGKFINKVVSH 623

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHIRF+DN SG LVHSMVAHL+ VTSLAVD  GLY+LSG++
Sbjct:   624 PTLPITITAHEDRHIRFWDNTSGTLVHSMVAHLEPVTSLAVDAHGLYLLSGSH 676

GO:0007254 "JNK cascade" evidence=NAS;TAS

GO:0007391 "dorsal closure" evidence=IMP;NAS;TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0046330 "positive regulation of JNK cascade" evidence=IGI;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0042051 "compound eye photoreceptor development" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0072686 "mitotic spindle" evidence=IDA

MGI|MGI:2151064 Strn3 "striatin, calmodulin binding protein 3" [Mus musculus (taxid:10090)]

 Score = 354 (129.7 bits), Expect = 2.1e-31, P = 2.1e-31
 Identities = 64/113 (56%), Positives = 88/113 (77%)

Query:     4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
             +G PTS+DF+  +   MVT+F+  + V++DLET + +V + S    G+     INRVV H
Sbjct:   630 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 689

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct:   690 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 742

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0030425 "dendrite" evidence=ISO

GO:0032355 "response to estradiol stimulus" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051721 "protein phosphatase 2A binding" evidence=ISO

GO:0070016 "armadillo repeat domain binding" evidence=ISO

RGD|621827 Strn3 "striatin, calmodulin binding protein 3" [Rattus norvegicus (taxid:10116)]

 Score = 353 (129.3 bits), Expect = 2.7e-31, P = 2.7e-31
 Identities = 63/113 (55%), Positives = 88/113 (77%)

Query:     4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
             +G PTS+DF+  +   MVT+F+  + +++DLET + +V + S    G+     INRVV H
Sbjct:   628 HGIPTSVDFIGCDPAHMVTSFNTGSAIIYDLETSQSLVMLSSQVDSGLQSSNHINRVVSH 687

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct:   688 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 740

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA;ISO

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0030425 "dendrite" evidence=IDA

GO:0032355 "response to estradiol stimulus" evidence=IDA

GO:0032403 "protein complex binding" evidence=ISO;IDA;IPI

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=IMP

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043234 "protein complex" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO;IMP

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0051721 "protein phosphatase 2A binding" evidence=IEA;ISO

GO:0070016 "armadillo repeat domain binding" evidence=IEA;ISO

UNIPROTKB|A5D7H2 STRN3 "Striatin-3" [Bos taurus (taxid:9913)]

 Score = 353 (129.3 bits), Expect = 2.8e-31, P = 2.8e-31
 Identities = 64/113 (56%), Positives = 88/113 (77%)

Query:     4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FGVSGGGGINRVVCH 62
             +G PTS+DF+  +   MVT+F+  + V++DLET + +V + S    G+     INRVV H
Sbjct:   631 HGIPTSVDFIGCDPAHMVTSFNTGSTVIYDLETSQSLVMLSSQMDSGLQSSNHINRVVSH 690

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct:   691 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743

GO:0005737 "cytoplasm" evidence=ISS

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005654 "nucleoplasm" evidence=ISS

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISS

GO:0070016 "armadillo repeat domain binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

UNIPROTKB|F1NH54 STRN3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 353 (129.3 bits), Expect = 2.9e-31, P = 2.9e-31
 Identities = 64/113 (56%), Positives = 88/113 (77%)

Query:     4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
             +G PTS+DF+  +   MV +F+  + V++DLET + VV + S  + GV     IN+VV H
Sbjct:   645 HGIPTSVDFIGCDPAHMVASFNTGSTVIYDLETSQSVVMLSSQVESGVQSNNHINKVVSH 704

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct:   705 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 757

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0070016 "armadillo repeat domain binding" evidence=IEA

UNIPROTKB|Q13033 STRN3 "Striatin-3" [Homo sapiens (taxid:9606)]

 Score = 352 (129.0 bits), Expect = 3.5e-31, P = 3.5e-31
 Identities = 64/113 (56%), Positives = 88/113 (77%)

Query:     4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCH 62
             +G PTS+DF+  +   MVT+F+  + V++DLET + +V + S    G+     INRVV H
Sbjct:   631 HGIPTSVDFIGCDPAHMVTSFNTGSAVIYDLETSQSLVILSSQVDSGLQSNNHINRVVSH 690

Query:    63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             PTLP+TITAH+DRHI+FFDN +GK++HSMVAHLDAVTSLAVDP G+Y++SG++
Sbjct:   691 PTLPVTITAHEDRHIKFFDNKTGKMIHSMVAHLDAVTSLAVDPNGIYLMSGSH 743

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005516 "calmodulin binding" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0032403 "protein complex binding" evidence=IDA

GO:0043234 "protein complex" evidence=ISS

GO:0043025 "neuronal cell body" evidence=ISS

GO:0030425 "dendrite" evidence=ISS

GO:0033147 "negative regulation of intracellular estrogen receptor signaling pathway" evidence=ISS

GO:0032355 "response to estradiol stimulus" evidence=ISS

GO:0051721 "protein phosphatase 2A binding" evidence=IDA

GO:0000159 "protein phosphatase type 2A complex" evidence=IDA

GO:0070016 "armadillo repeat domain binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-070112-1172 zgc:158357 "zgc:158357" [Danio rerio (taxid:7955)]

 Score = 318 (117.0 bits), Expect = 1.6e-27, P = 1.6e-27
 Identities = 60/112 (53%), Positives = 83/112 (74%)

Query:     5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
             G P+S+D V  +   MVTAF N    ++++ET + ++ ++S   G       IN+V+ HP
Sbjct:   617 GVPSSVDVVCSDPAHMVTAFSNGRTGIYNMETRQLILELESQSAGKPDAPCQINKVLSHP 676

Query:    64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             TLP+TITA +DRHIRF+DN +GKL+HSMVAHLDAVTSLAVDP GLY++SG++
Sbjct:   677 TLPITITAQEDRHIRFYDNNTGKLIHSMVAHLDAVTSLAVDPNGLYLMSGSH 728

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E1C837 STRN "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 316 (116.3 bits), Expect = 2.7e-27, P = 2.7e-27
 Identities = 59/112 (52%), Positives = 85/112 (75%)

Query:     5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHP 63
             G P+S+D V  + + MV +F+     +F++ET + ++ ++S     VS    INRV+ HP
Sbjct:   635 GIPSSVDLVSSDPSLMVASFNTGHTSIFNMETRQRILTLESGVDNTVSTSCQINRVISHP 694

Query:    64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             TLP++ITAH+DRHI+F+DN +GKL+HSMVAHLDAVTSLAVDP GLY++SG++
Sbjct:   695 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLDAVTSLAVDPNGLYLMSGSH 746

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0070016 "armadillo repeat domain binding" evidence=IEA

MGI|MGI:1333757 Strn "striatin, calmodulin binding protein" [Mus musculus (taxid:10090)]

 Score = 314 (115.6 bits), Expect = 4.2e-27, P = 4.2e-27
 Identities = 58/112 (51%), Positives = 83/112 (74%)

Query:     5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
             G P S+D V  + + MV +F      +F++ET + V+ ++S+    S     INRV+ HP
Sbjct:   615 GIPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRVLTLESNVDSTSSSSCQINRVISHP 674

Query:    64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct:   675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726

GO:0005516 "calmodulin binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005923 "tight junction" evidence=ISO

GO:0007626 "locomotory behavior" evidence=ISO

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0014069 "postsynaptic density" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016055 "Wnt receptor signaling pathway" evidence=ISO

GO:0016358 "dendrite development" evidence=ISO

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030331 "estrogen receptor binding" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043197 "dendritic spine" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0051721 "protein phosphatase 2A binding" evidence=ISO

GO:0070016 "armadillo repeat domain binding" evidence=ISO

UNIPROTKB|E1BFB3 STRN "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 311 (114.5 bits), Expect = 8.8e-27, P = 8.8e-27
 Identities = 56/112 (50%), Positives = 83/112 (74%)

Query:     5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGG-GINRVVCHP 63
             G P S+D V  + + MV +F      +F++ET + ++ ++S+    +     INRV+ HP
Sbjct:   615 GVPASVDLVSSDPSHMVASFSKGYTSIFNMETQQRILTLESNLDSTANSSCQINRVISHP 674

Query:    64 TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             TLP++ITAH+DRHI+F+DN +GKL+HSMVAHL+AVTSLAVDP GLY++SG++
Sbjct:   675 TLPISITAHEDRHIKFYDNNTGKLIHSMVAHLEAVTSLAVDPNGLYLMSGSH 726

GO:0070016 "armadillo repeat domain binding" evidence=IEA

GO:0051721 "protein phosphatase 2A binding" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0030331 "estrogen receptor binding" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0000159 "protein phosphatase type 2A complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q13033	STRN3_HUMAN	No assigned EC number	0.5877	0.9568	0.1392	yes	N/A
Q9ERG2	STRN3_MOUSE	No assigned EC number	0.5663	0.9655	0.1407	yes	N/A
A5D7H2	STRN3_BOVIN	No assigned EC number	0.5789	0.9568	0.1392	yes	N/A
P58405	STRN3_RAT	No assigned EC number	0.5575	0.9655	0.1410	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	116
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-11
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-10
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-08
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-07
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	7e-05
smart00320	40	smart00320, WD40, WD40 repeats	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 57.3 bits (139), Expect = 6e-11
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 8   TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL 67
             +    D  T + +   +    L+DLETG+ V  +      VS       V   P   +
Sbjct: 55  RDVAASAD-GTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSS------VAFSPDGRI 107

Query: 68  TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
             ++  D+ I+ +D  +GK + ++  H D V S+A  P G ++ S + 
Sbjct: 108 LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQ 155

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACV-LFDLETGKPVVRIDSSQFGVSGGGGINRVVCH 62
                S+ F        V +      + L+DL TGK V  +          G +N V   
Sbjct: 135 TDWVNSVAF--SPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT------GEVNSVAFS 186

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113
           P     +++  D  I+ +D  +GK + ++  H + V S+A  P G  + SG
Sbjct: 187 PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG 237

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 7/107 (6%)

Query: 8   TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL 67
           +S+ F  D    + ++  +    ++D+ETGK +  +            +N V   P    
Sbjct: 97  SSVAFSPDGRI-LSSSSRDKTIKVWDVETGKCLTTLRGHT------DWVNSVAFSPDGTF 149

Query: 68  TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
             ++  D  I+ +D  +GK V ++  H   V S+A  P G  +LS +
Sbjct: 150 VASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSS 196

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 8   TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL 67
            S+ F  D   K++++  +    L+DL TGK +  +   +       G+N V   P   L
Sbjct: 181 NSVAFSPDGE-KLLSSSSDGTIKLWDLSTGKCLGTLRGHE------NGVNSVAFSPDGYL 233

Query: 68  TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113
             +  +D  IR +D  +G+ V ++  H ++VTSLA  P G  + SG
Sbjct: 234 LASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 7/106 (6%)

Query: 8   TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL 67
           T + F  D    + T   +    ++DLETG+ +             G +  V        
Sbjct: 13  TCVAFSPD-GKLLATGSGDGTIKVWDLETGELLRT------LKGHTGPVRDVAASADGTY 65

Query: 68  TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113
             +   D+ IR +D  +G+ V ++  H   V+S+A  P G  + S 
Sbjct: 66  LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSS 111

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 40.5 bits (93), Expect = 7e-05
 Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
               +S+ F  D    + +   +    L+DL TGK +    S                 P
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVS------SFSP 251

Query: 64  TLPLTITAHDDRHIRFFDNVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
              L  +   D  IR +D  S   L+ ++  H  +V S+A  P G  + SG+ 
Sbjct: 252 DGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSS 304

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 84  SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           SG+L+ ++  H   VTS+A  P G Y+ SG+ 
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSD 32

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	116
KOG0263|consensus	707		99.94
KOG0263|consensus	707		99.94
KOG0271|consensus	480		99.93
KOG0272|consensus	459		99.93
KOG0271|consensus	480		99.92
KOG0272|consensus	459		99.92
KOG0266|consensus	456		99.92
KOG0284|consensus	464		99.91
PTZ00421	493	coronin; Provisional	99.91
KOG0286|consensus	343		99.91
KOG0279|consensus	315		99.9
KOG0291|consensus	893		99.89
KOG0266|consensus	456		99.88
KOG0286|consensus	343		99.88
KOG0273|consensus	524		99.88
PTZ00420	568	coronin; Provisional	99.88
KOG0316|consensus	307		99.87
KOG0319|consensus	775		99.87
KOG0279|consensus	315		99.87
KOG0285|consensus	460		99.87
KOG0315|consensus	311		99.86
PTZ00421	493	coronin; Provisional	99.85
KOG0645|consensus	312		99.85
KOG0302|consensus	440		99.85
KOG1407|consensus	313		99.85
KOG0276|consensus	794		99.85
KOG0295|consensus	406		99.85
KOG0318|consensus	603		99.85
KOG0283|consensus	712		99.84
KOG0292|consensus	1202		99.84
KOG0319|consensus	775		99.84
KOG0303|consensus	472		99.84
KOG0285|consensus	460		99.84
KOG0645|consensus	312		99.84
KOG0973|consensus	942		99.83
KOG0295|consensus	406		99.83
KOG0643|consensus	327		99.83
KOG0284|consensus	464		99.83
KOG0275|consensus	508		99.82
PTZ00420	568	coronin; Provisional	99.82
KOG0283|consensus	712		99.82
KOG0273|consensus	524		99.81
KOG0282|consensus	503		99.81
KOG0289|consensus	506		99.81
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.8
KOG0289|consensus	506		99.8
KOG0269|consensus	839		99.8
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	99.8
KOG0278|consensus	334		99.8
KOG0318|consensus	603		99.8
KOG0647|consensus	347		99.79
KOG0293|consensus	519		99.79
KOG0265|consensus	338		99.79
KOG0282|consensus	503		99.79
KOG0276|consensus	794		99.79
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.79
KOG0643|consensus	327		99.79
KOG0265|consensus	338		99.79
KOG0296|consensus	399		99.78
PLN00181	793	protein SPA1-RELATED; Provisional	99.78
KOG0275|consensus	508		99.77
KOG0292|consensus	1202		99.77
KOG0264|consensus	422		99.77
KOG1539|consensus	910		99.77
KOG1445|consensus	1012		99.77
KOG0264|consensus	422		99.76
PLN00181	793	protein SPA1-RELATED; Provisional	99.76
KOG0294|consensus	362		99.76
KOG0291|consensus	893		99.76
KOG0281|consensus	499		99.76
KOG0277|consensus	311		99.75
KOG1407|consensus	313		99.75
KOG0296|consensus	399		99.75
KOG2394|consensus	636		99.75
KOG0294|consensus	362		99.75
KOG0641|consensus	350		99.75
KOG1273|consensus	405		99.74
KOG0305|consensus	484		99.74
KOG0772|consensus	641		99.74
KOG0305|consensus	484		99.74
KOG0973|consensus	942		99.74
KOG0267|consensus	825		99.74
KOG0277|consensus	311		99.74
KOG0315|consensus	311		99.74
KOG0310|consensus	487		99.72
KOG0308|consensus	735		99.72
KOG2394|consensus	636		99.72
KOG0293|consensus	519		99.71
KOG0306|consensus	888		99.71
KOG0288|consensus	459		99.71
KOG0316|consensus	307		99.71
KOG1009|consensus	434		99.71
KOG0310|consensus	487		99.71
KOG0274|consensus	537		99.71
KOG0313|consensus	423		99.71
KOG0639|consensus	705		99.7
KOG0640|consensus	430		99.7
KOG1446|consensus	311		99.7
KOG0281|consensus	499		99.69
KOG0640|consensus	430		99.69
KOG0306|consensus	888		99.68
KOG1034|consensus	385		99.67
KOG0322|consensus	323		99.67
KOG1274|consensus	933		99.66
KOG2110|consensus	391		99.66
KOG1408|consensus	1080		99.66
KOG0313|consensus	423		99.65
KOG1446|consensus	311		99.65
KOG0308|consensus	735		99.65
KOG0303|consensus	472		99.64
KOG0299|consensus	479		99.63
KOG0267|consensus	825		99.63
KOG0270|consensus	463		99.63
KOG0772|consensus	641		99.63
KOG0299|consensus	479		99.62
KOG2096|consensus	420		99.62
KOG0639|consensus	705		99.61
KOG1007|consensus	370		99.61
KOG0269|consensus	839		99.6
KOG0268|consensus	433		99.6
KOG1063|consensus	764		99.59
KOG1009|consensus	434		99.58
KOG0646|consensus	476		99.58
KOG2055|consensus	514		99.57
KOG0771|consensus	398		99.57
KOG1445|consensus	1012		99.57
KOG0300|consensus	481		99.57
KOG0278|consensus	334		99.56
KOG4283|consensus	397		99.56
KOG0647|consensus	347		99.56
KOG1539|consensus	910		99.56
KOG2048|consensus	691		99.55
KOG0646|consensus	476		99.55
KOG1036|consensus	323		99.55
KOG1273|consensus	405		99.54
KOG1538|consensus	1081		99.54
KOG1034|consensus	385		99.54
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.54
KOG0649|consensus	325		99.54
KOG0302|consensus	440		99.54
KOG1332|consensus	299		99.53
KOG1007|consensus	370		99.53
KOG2919|consensus	406		99.53
KOG1310|consensus	758		99.53
KOG0301|consensus	745		99.53
KOG0641|consensus	350		99.53
KOG0290|consensus	364		99.52
KOG0268|consensus	433		99.52
KOG1332|consensus	299		99.52
KOG1274|consensus	933		99.52
KOG4283|consensus	397		99.51
KOG0288|consensus	459		99.51
KOG1524|consensus	737		99.51
KOG1036|consensus	323		99.51
KOG2111|consensus	346		99.5
KOG0644|consensus	1113		99.49
KOG2096|consensus	420		99.49
KOG0274|consensus	537		99.49
KOG2048|consensus	691		99.49
KOG2139|consensus	445		99.48
KOG0771|consensus	398		99.48
KOG0301|consensus	745		99.48
KOG4328|consensus	498		99.47
KOG0307|consensus	1049		99.47
KOG2106|consensus	626		99.47
KOG0270|consensus	463		99.47
KOG2111|consensus	346		99.46
KOG4227|consensus	609		99.44
KOG2055|consensus	514		99.43
KOG0650|consensus	733		99.43
KOG2445|consensus	361		99.41
KOG0300|consensus	481		99.41
KOG0321|consensus	720		99.41
KOG0290|consensus	364		99.4
KOG3881|consensus	412		99.4
KOG4378|consensus	673		99.4
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.4
KOG4378|consensus	673		99.39
KOG1272|consensus	545		99.39
KOG2110|consensus	391		99.39
KOG1188|consensus	376		99.39
KOG1408|consensus	1080		99.38
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.38
KOG2106|consensus	626		99.37
KOG0642|consensus	577		99.37
KOG4547|consensus	541		99.36
KOG1963|consensus	792		99.35
KOG1272|consensus	545		99.35
PRK01742	429	tolB translocation protein TolB; Provisional	99.34
KOG0307|consensus	1049		99.33
KOG0974|consensus	967		99.33
COG2319	466	FOG: WD40 repeat [General function prediction only	99.33
KOG2919|consensus	406		99.32
KOG4328|consensus	498		99.31
KOG1523|consensus	361		99.31
KOG1523|consensus	361		99.31
KOG0322|consensus	323		99.3
KOG1063|consensus	764		99.29
KOG2445|consensus	361		99.27
KOG0642|consensus	577		99.26
KOG2315|consensus	566		99.26
PRK05137	435	tolB translocation protein TolB; Provisional	99.26
KOG0321|consensus	720		99.25
KOG0974|consensus	967		99.25
PRK03629	429	tolB translocation protein TolB; Provisional	99.24
COG2319	466	FOG: WD40 repeat [General function prediction only	99.23
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.23
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.22
KOG2139|consensus	445		99.21
PRK02889	427	tolB translocation protein TolB; Provisional	99.21
KOG0649|consensus	325		99.2
PRK04922	433	tolB translocation protein TolB; Provisional	99.2
KOG1524|consensus	737		99.19
KOG3881|consensus	412		99.18
PRK11028	330	6-phosphogluconolactonase; Provisional	99.18
KOG0650|consensus	733		99.18
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.17
KOG3914|consensus	390		99.17
KOG1587|consensus	555		99.13
PRK03629	429	tolB translocation protein TolB; Provisional	99.13
COG4946	668	Uncharacterized protein related to the periplasmic	99.11
COG4946	668	Uncharacterized protein related to the periplasmic	99.11
KOG4497|consensus	447		99.11
PRK00178	430	tolB translocation protein TolB; Provisional	99.1
PRK11028	330	6-phosphogluconolactonase; Provisional	99.1
KOG1963|consensus	792		99.08
KOG1188|consensus	376		99.08
PRK04792	448	tolB translocation protein TolB; Provisional	99.06
PRK05137	435	tolB translocation protein TolB; Provisional	99.05
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.05
PRK01742	429	tolB translocation protein TolB; Provisional	99.0
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	99.0
KOG4227|consensus	609		99.0
KOG4547|consensus	541		98.99
PRK02889	427	tolB translocation protein TolB; Provisional	98.99
KOG2321|consensus	703		98.99
PRK04922	433	tolB translocation protein TolB; Provisional	98.98
KOG1310|consensus	758		98.98
KOG1587|consensus	555		98.98
KOG4497|consensus	447		98.96
KOG0280|consensus	339		98.96
PRK01029	428	tolB translocation protein TolB; Provisional	98.96
KOG2695|consensus	425		98.93
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.91
KOG0280|consensus	339		98.89
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.88
KOG4640|consensus	665		98.87
PRK04792	448	tolB translocation protein TolB; Provisional	98.84
KOG1517|consensus	1387		98.82
KOG1240|consensus	1431		98.8
KOG1334|consensus	559		98.79
PRK01029	428	tolB translocation protein TolB; Provisional	98.79
PRK04043	419	tolB translocation protein TolB; Provisional	98.79
PRK00178	430	tolB translocation protein TolB; Provisional	98.79
KOG2315|consensus	566		98.78
KOG1538|consensus	1081		98.75
KOG1334|consensus	559		98.73
KOG2314|consensus	698		98.72
KOG1517|consensus	1387		98.69
KOG0644|consensus	1113		98.65
KOG2321|consensus	703		98.63
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.62
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.61
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.6
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.57
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.54
KOG2695|consensus	425		98.53
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.53
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.52
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.5
KOG2314|consensus	698		98.5
PRK04043	419	tolB translocation protein TolB; Provisional	98.49
KOG2041|consensus	1189		98.45
KOG4532|consensus	344		98.43
KOG3621|consensus	726		98.42
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.4
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	98.37
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	98.35
KOG4714|consensus	319		98.34
KOG1645|consensus	463		98.34
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.33
KOG3617|consensus	1416		98.3
KOG3914|consensus	390		98.28
KOG1354|consensus	433		98.26
KOG1240|consensus	1431		98.25
KOG4532|consensus	344		98.24
KOG1409|consensus	404		98.24
KOG1912|consensus	1062		98.22
KOG1064|consensus	2439		98.2
KOG4714|consensus	319		98.18
KOG2066|consensus	846		98.17
KOG1354|consensus	433		98.15
KOG1064|consensus	2439		98.12
KOG1409|consensus	404		98.12
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.1
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.06
KOG2041|consensus	1189		98.04
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.04
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.02
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.02
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.01
KOG0309|consensus	1081		98.01
KOG2066|consensus	846		97.98
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.97
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	97.96
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.96
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.95
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.93
KOG4190|consensus	1034		97.89
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.88
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.86
KOG4649|consensus	354		97.86
PRK02888	635	nitrous-oxide reductase; Validated	97.84
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.83
KOG2079|consensus	1206		97.82
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	97.77
KOG1912|consensus	1062		97.7
KOG3621|consensus	726		97.68
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.67
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.67
PRK13616	591	lipoprotein LpqB; Provisional	97.67
KOG1832|consensus	1516		97.62
PRK02888	635	nitrous-oxide reductase; Validated	97.61
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.59
KOG1645|consensus	463		97.54
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	97.54
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	97.51
KOG3617|consensus	1416		97.5
KOG4499|consensus	310		97.47
KOG1920|consensus	1265		97.39
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.37
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.34
KOG2444|consensus	238		97.34
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	97.33
KOG1275|consensus	1118		97.32
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.32
KOG0882|consensus	558		97.3
KOG2395|consensus	644		97.3
KOG4190|consensus	1034		97.29
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	97.28
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.24
KOG2079|consensus	1206		97.24
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.19
KOG4640|consensus	665		97.17
KOG1832|consensus	1516		97.17
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	97.17
KOG1920|consensus	1265		97.12
KOG1275|consensus	1118		97.1
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.03
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	97.02
COG3391	381	Uncharacterized conserved protein [Function unknow	96.98
KOG4649|consensus	354		96.96
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	96.93
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.93
KOG2114|consensus	933		96.88
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.82
COG3391	381	Uncharacterized conserved protein [Function unknow	96.55
KOG2377|consensus	657		96.51
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	96.48
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.47
KOG2395|consensus	644		96.44
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	96.36
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.33
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.32
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.3
PRK13616	591	lipoprotein LpqB; Provisional	96.29
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	96.23
PRK10115	686	protease 2; Provisional	96.07
KOG0309|consensus	1081		96.0
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	95.93
KOG2114|consensus	933		95.91
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.84
KOG1008|consensus	783		95.83
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.77
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.74
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	95.72
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	95.65
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	95.64
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.54
KOG3630|consensus	1405		95.5
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.48
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	95.41
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.38
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	95.32
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	95.12
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	95.09
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	95.05
KOG2247|consensus	615		95.05
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.98
KOG2444|consensus	238		94.95
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.85
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	94.83
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	94.81
KOG0882|consensus	558		94.75
KOG4460|consensus	741		94.68
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	94.66
COG5167	776	VID27 Protein involved in vacuole import and degra	94.66
KOG2377|consensus	657		94.65
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	94.41
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	94.37
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	94.23
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	94.19
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	94.14
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.14
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.7
COG5167	776	VID27 Protein involved in vacuole import and degra	93.65
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.49
PRK10115	686	protease 2; Provisional	93.33
KOG1916|consensus	1283		93.3
KOG1008|consensus	783		93.29
PF13449	326	Phytase-like: Esterase-like activity of phytase	93.22
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	92.96
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	92.93
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	92.74
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	92.63
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	92.56
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	92.36
KOG2280|consensus	829		92.31
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	92.24
KOG1520|consensus	376		92.16
PRK13684	334	Ycf48-like protein; Provisional	91.92
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	91.88
KOG4499|consensus	310		91.85
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	91.63
PF01436	28	NHL: NHL repeat; InterPro: IPR001258 The NHL repea	91.17
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	90.86
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	90.56
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	90.42
KOG1897|consensus	1096		90.24
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	89.77
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	89.42
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	89.38
KOG1916|consensus	1283		89.3
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	89.17
PF05787	524	DUF839: Bacterial protein of unknown function (DUF	89.0
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	88.78
KOG3616|consensus	1636		88.44
PF01731	86	Arylesterase: Arylesterase; InterPro: IPR002640 Th	87.99
PHA02713	557	hypothetical protein; Provisional	87.64
PHA02713	557	hypothetical protein; Provisional	87.25
PF03022	287	MRJP: Major royal jelly protein; InterPro: IPR0035	87.17
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	87.17
PF13449	326	Phytase-like: Esterase-like activity of phytase	87.12
KOG3630|consensus	1405		87.04
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	87.03
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	86.71
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	86.53
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	85.73
PHA03098	534	kelch-like protein; Provisional	85.09
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	84.92
KOG4441|consensus	571		83.78
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	83.43
PF12768	281	Rax2: Cortical protein marker for cell polarity	83.06
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	82.87
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	82.41
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	82.2
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	82.18
PF14269	299	Arylsulfotran_2: Arylsulfotransferase (ASST)	81.88
TIGR02608	55	delta_60_rpt delta-60 repeat domain. This domain o	81.75
PLN00033	398	photosystem II stability/assembly factor; Provisio	81.68
PF13570	40	PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.	81.57
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	81.12
KOG3616|consensus	1636		81.03
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	80.74
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	80.12

>KOG0263|consensus

Probab=99.94  E-value=3.7e-26  Score=142.51  Aligned_cols=108  Identities=20%  Similarity=0.295  Sum_probs=103.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+-|.|+.|+| +.+++++|+.|.+|++||..+|..++.|.+|      .+.|.+++++|+|+++++|++|+.|.+||
T Consensus       533 ghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH------~~~V~al~~Sp~Gr~LaSg~ed~~I~iWD  605 (707)
T KOG0263|consen  533 GHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIFTGH------KGPVTALAFSPCGRYLASGDEDGLIKIWD  605 (707)
T ss_pred             ccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEecCC------CCceEEEEEcCCCceEeecccCCcEEEEE
Confidence            4778899999999 8999999999999999999999999999999      78999999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.+..+.+|.+.+.++.|+++|..|++++.|
T Consensus       606 l~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~D  640 (707)
T KOG0263|consen  606 LANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGAD  640 (707)
T ss_pred             cCCCcchhhhhcccCceeEEEEecCCCEEEecCCC
Confidence            99999999999999999999999999999999876

>KOG0263|consensus

Probab=99.94  E-value=7.8e-26  Score=141.06  Aligned_cols=115  Identities=24%  Similarity=0.332  Sum_probs=106.4

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------   50 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------   50 (116)
                      +.|.|+|+...|+| +.++|+++++|+.+++|.+.+...+..+++|...+                              
T Consensus       448 ~GH~GPVyg~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~  526 (707)
T KOG0263|consen  448 YGHSGPVYGCSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK  526 (707)
T ss_pred             ecCCCceeeeeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence            35899999999999 78999999999999999999988888888775522                              


Q ss_pred             ------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 ------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                            +|-+.+.++.|+|+..++++|+.|.++++||+.+|..++.+.+|.++|.+++|+|+|++|++|+.|
T Consensus       527 PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed  598 (707)
T KOG0263|consen  527 PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDED  598 (707)
T ss_pred             chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccC
Confidence                  788889999999999999999999999999999999999999999999999999999999999876

>KOG0271|consensus

Probab=99.93  E-value=3.6e-25  Score=129.89  Aligned_cols=108  Identities=20%  Similarity=0.294  Sum_probs=99.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.++.|+| ++..|++|+.|.++++||+.+..+.+++++|      ..-|.+++|+||++.|++|+.||.|++||
T Consensus       113 GH~e~Vl~~~fsp-~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH------~~WVlcvawsPDgk~iASG~~dg~I~lwd  185 (480)
T KOG0271|consen  113 GHGEAVLSVQFSP-TGSRLVTGSGDTTVRLWDLDTETPLFTCKGH------KNWVLCVAWSPDGKKIASGSKDGSIRLWD  185 (480)
T ss_pred             CCCCcEEEEEecC-CCceEEecCCCceEEeeccCCCCcceeecCC------ccEEEEEEECCCcchhhccccCCeEEEec
Confidence            3789999999999 8999999999999999999999999999999      67899999999999999999999999999


Q ss_pred             CCCCeEE-EEeecccccEEEEEECC-----CCcEEEeeecC
Q psy17133         82 NVSGKLV-HSMVAHLDAVTSLAVDP-----QGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~s~d  116 (116)
                      .++|+.+ +.+.+|...|++++|.|     .++.|+++|.|
T Consensus       186 pktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD  226 (480)
T KOG0271|consen  186 PKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD  226 (480)
T ss_pred             CCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence            9988775 56889999999999965     67789988876

>KOG0272|consensus

Probab=99.93  E-value=6.9e-25  Score=129.58  Aligned_cols=107  Identities=20%  Similarity=0.249  Sum_probs=102.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.+++|.| +|..+++|+.|..-++||+.+++.+..+.+|      ...|.++.|+|+|..+++|+.|++++|||+
T Consensus       302 Hs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH------~k~I~~V~fsPNGy~lATgs~Dnt~kVWDL  374 (459)
T KOG0272|consen  302 HSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTGRCIMFLAGH------IKEILSVAFSPNGYHLATGSSDNTCKVWDL  374 (459)
T ss_pred             cccccceeEecC-CCceeeccCccchhheeecccCcEEEEeccc------ccceeeEeECCCceEEeecCCCCcEEEeee
Confidence            778999999999 8999999999999999999999999999999      679999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +..+.+.++.+|...|+.++|+| .|.+|+|+|.|
T Consensus       375 R~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD  409 (459)
T KOG0272|consen  375 RMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYD  409 (459)
T ss_pred             cccccceecccccchhhheEecccCCeEEEEcccC
Confidence            98889999999999999999999 78899999987

>KOG0271|consensus

Probab=99.92  E-value=1.2e-24  Score=127.69  Aligned_cols=109  Identities=18%  Similarity=0.256  Sum_probs=103.6

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |.|...|..+.|+| ++.++++++-|..|++|+-.+|+.+..|.+|      -..|..++|+.|.+++++++.|.++++|
T Consensus       364 tgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tGk~lasfRGH------v~~VYqvawsaDsRLlVS~SkDsTLKvw  436 (480)
T KOG0271|consen  364 TGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTGKFLASFRGH------VAAVYQVAWSADSRLLVSGSKDSTLKVW  436 (480)
T ss_pred             hchhhheeeEEECC-CccEEEEeecccceeeeeCCCcchhhhhhhc------cceeEEEEeccCccEEEEcCCCceEEEE
Confidence            45788899999999 8999999999999999999999999999999      5689999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.++...+.+|...|.++.|+|||..+++|+.|
T Consensus       437 ~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkd  472 (480)
T KOG0271|consen  437 DVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKD  472 (480)
T ss_pred             EeeeeeecccCCCCCceEEEEEecCCCceeecCCCc
Confidence            999999999999999999999999999999999876

>KOG0272|consensus

Probab=99.92  E-value=2.8e-25  Score=131.23  Aligned_cols=108  Identities=21%  Similarity=0.277  Sum_probs=102.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|..+|..++|+| +|++|++++-|.+-++||+.+++.+...++|      ...|.+++|+|||.++++|+.|..-++||
T Consensus       259 gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGH------s~~v~~iaf~~DGSL~~tGGlD~~~RvWD  331 (459)
T KOG0272|consen  259 GHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGH------SKGVFSIAFQPDGSLAATGGLDSLGRVWD  331 (459)
T ss_pred             cchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhccc------ccccceeEecCCCceeeccCccchhheee
Confidence            3678899999999 8999999999999999999999988888999      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++|+++-.+.+|...|.+++|+|+|-.|+|||.|
T Consensus       332 lRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~D  366 (459)
T KOG0272|consen  332 LRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSD  366 (459)
T ss_pred             cccCcEEEEecccccceeeEeECCCceEEeecCCC
Confidence            99999999999999999999999999999999987

>KOG0266|consensus

Probab=99.92  E-value=1.7e-23  Score=129.49  Aligned_cols=107  Identities=21%  Similarity=0.439  Sum_probs=100.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEEC-CCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDL-ETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |...|.+++|+| ++.++++++.|.++++||+ ..+..+..+++|      ...+++++|+|+++.+++++.|++|++||
T Consensus       202 h~~~v~~~~fs~-d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH------~~~v~~~~f~p~g~~i~Sgs~D~tvriWd  274 (456)
T KOG0266|consen  202 HTRGVSDVAFSP-DGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGH------STYVTSVAFSPDGNLLVSGSDDGTVRIWD  274 (456)
T ss_pred             cccceeeeEECC-CCcEEEEecCCceEEEeeccCCCeEEEEecCC------CCceEEEEecCCCCEEEEecCCCcEEEEe
Confidence            677899999999 8899999999999999999 455788999999      77899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++++...+.+|.+.|+.++|++++++|++++.|
T Consensus       275 ~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d  309 (456)
T KOG0266|consen  275 VRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYD  309 (456)
T ss_pred             ccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCC
Confidence            99999999999999999999999999999999865

>KOG0284|consensus

Probab=99.91  E-value=2.3e-24  Score=127.06  Aligned_cols=107  Identities=21%  Similarity=0.387  Sum_probs=99.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|++++|+| +...++++++|+.++|||..-.++...+.+|      .-.+.+++|+|...++++++.|+.|++||.
T Consensus       179 h~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GH------gwdVksvdWHP~kgLiasgskDnlVKlWDp  251 (464)
T KOG0284|consen  179 HAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGH------GWDVKSVDWHPTKGLIASGSKDNLVKLWDP  251 (464)
T ss_pred             hhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccC------CCCcceeccCCccceeEEccCCceeEeecC
Confidence            347899999999 7799999999999999999878777888888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++.++.++..|+..|..+.|+|++++|+|+|.|
T Consensus       252 rSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD  285 (464)
T KOG0284|consen  252 RSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKD  285 (464)
T ss_pred             CCcchhhhhhhccceEEEEEEcCCCCeeEEccCC
Confidence            9999999999999999999999999999999987

>PTZ00421 coronin; Provisional

Probab=99.91  E-value=1.9e-22  Score=125.32  Aligned_cols=108  Identities=20%  Similarity=0.320  Sum_probs=96.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d   74 (116)
                      |.+.|.+++|+|.++++|++++.|+.|++||+.++       +++..+.+|      ...|.+++|+|++ .++++++.|
T Consensus        74 H~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH------~~~V~~l~f~P~~~~iLaSgs~D  147 (493)
T PTZ00421         74 QEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGH------TKKVGIVSFHPSAMNVLASAGAD  147 (493)
T ss_pred             CCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCC------CCcEEEEEeCcCCCCEEEEEeCC
Confidence            78899999999966689999999999999999754       245667777      6789999999985 699999999


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|++||+.+++.+..+..|...|.+++|+|++++|++++.|
T Consensus       148 gtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D  189 (493)
T PTZ00421        148 MVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD  189 (493)
T ss_pred             CEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC
Confidence            999999999999988888899999999999999999999876

>KOG0286|consensus

Probab=99.91  E-value=1.2e-22  Score=115.77  Aligned_cols=108  Identities=19%  Similarity=0.337  Sum_probs=101.9

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF   79 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~   79 (116)
                      +.|++.+.++.|.+ + ..|++++.|.+..+||+++++++..|.+|      .+.|.+++++| +++.+++++-|+..++
T Consensus       142 ~gHtgylScC~f~d-D-~~ilT~SGD~TCalWDie~g~~~~~f~GH------~gDV~slsl~p~~~ntFvSg~cD~~akl  213 (343)
T KOG0286|consen  142 AGHTGYLSCCRFLD-D-NHILTGSGDMTCALWDIETGQQTQVFHGH------TGDVMSLSLSPSDGNTFVSGGCDKSAKL  213 (343)
T ss_pred             cCccceeEEEEEcC-C-CceEecCCCceEEEEEcccceEEEEecCC------cccEEEEecCCCCCCeEEecccccceee
Confidence            35889999999986 3 88999999999999999999999999999      78999999999 8999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||++.+...+.+.+|+..|..++|.|+|.-|++||.|
T Consensus       214 WD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD  250 (343)
T KOG0286|consen  214 WDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDD  250 (343)
T ss_pred             eeccCcceeEeecccccccceEEEccCCCeeeecCCC
Confidence            9999999999999999999999999999999999986

>KOG0279|consensus

Probab=99.90  E-value=2.2e-22  Score=113.99  Aligned_cols=113  Identities=19%  Similarity=0.263  Sum_probs=101.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------------------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------------------------   50 (116)
                      |+-.|..+..++ ++++.++++.|+.+++||+.+++....|.+|...+                                
T Consensus        62 HsH~v~dv~~s~-dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~  140 (315)
T KOG0279|consen   62 HSHFVSDVVLSS-DGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY  140 (315)
T ss_pred             cceEecceEEcc-CCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE
Confidence            677789999999 89999999999999999999999888888886632                                


Q ss_pred             -----CCCCceeEEEEcCC--CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 -----SGGGGINRVVCHPT--LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 -----~~~~~i~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                           .++.-|.+++|+|+  .+++++++.|+++++||+++-+....+.+|.+.++.+.++|||...++|+.|
T Consensus       141 t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkd  213 (315)
T KOG0279|consen  141 TIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKD  213 (315)
T ss_pred             EEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCC
Confidence                 33567999999998  6799999999999999999999999999999999999999999999999876

>KOG0291|consensus

Probab=99.89  E-value=5.1e-22  Score=124.65  Aligned_cols=107  Identities=18%  Similarity=0.339  Sum_probs=87.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD-   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~-   81 (116)
                      |...+.+++++| +|+++++|++|++|++||...+-...+|..|      ++.++.+.|+..+..+++.+.||+|+.|| 
T Consensus       349 H~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteH------ts~Vt~v~f~~~g~~llssSLDGtVRAwDl  421 (893)
T KOG0291|consen  349 HSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEH------TSGVTAVQFTARGNVLLSSSLDGTVRAWDL  421 (893)
T ss_pred             cccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccC------CCceEEEEEEecCCEEEEeecCCeEEeeee
Confidence            667899999999 8999999999999999999999999999888      44555555555555555555555555555 


Q ss_pred             -------------------------------------------CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 -------------------------------------------NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 -------------------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                                                                 +++|+++..+.+|+++|.+++|+|++..|+++|+|
T Consensus       422 kRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWD  499 (893)
T KOG0291|consen  422 KRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWD  499 (893)
T ss_pred             cccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEecccc
Confidence                                                       44467778888999999999999999999999997

>KOG0266|consensus

Probab=99.88  E-value=3.6e-21  Score=119.29  Aligned_cols=108  Identities=25%  Similarity=0.401  Sum_probs=97.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|++++|+| .++.+++|+.|+.|++||+.+++.+..+.+|      ...|.+++|++++.++++++.|+.|++||
T Consensus       244 gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~h------s~~is~~~f~~d~~~l~s~s~d~~i~vwd  316 (456)
T KOG0266|consen  244 GHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGH------SDGISGLAFSPDGNLLVSASYDGTIRVWD  316 (456)
T ss_pred             CCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeecc------CCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence            5889999999999 6699999999999999999999999999999      67899999999999999999999999999


Q ss_pred             CCCCe--EEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGK--LVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~--~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.++.  +...+..+..  .++.++|+|+++++++++.|
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d  355 (456)
T KOG0266|consen  317 LETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD  355 (456)
T ss_pred             CCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence            99998  4566665544  48999999999999998765

>KOG0286|consensus

Probab=99.88  E-value=8.4e-21  Score=108.37  Aligned_cols=110  Identities=22%  Similarity=0.382  Sum_probs=102.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|++-|.++.|.| +|.-+++|++|+..++||++..+++..+.....    ...|++++|+..|++++++..|..+.+||
T Consensus       227 ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~----~~gitSv~FS~SGRlLfagy~d~~c~vWD  301 (343)
T KOG0286|consen  227 GHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAVYSHDSI----ICGITSVAFSKSGRLLFAGYDDFTCNVWD  301 (343)
T ss_pred             ccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEeeeccCcc----cCCceeEEEcccccEEEeeecCCceeEee
Confidence            3788899999999 899999999999999999999888888875533    56899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .-.++....+.+|..+|+++..+|||..++|||+|
T Consensus       302 tlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWD  336 (343)
T KOG0286|consen  302 TLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWD  336 (343)
T ss_pred             ccccceEEEeeccCCeeEEEEECCCCcEEEecchh
Confidence            99899999999999999999999999999999987

>KOG0273|consensus

Probab=99.88  E-value=3.7e-21  Score=115.41  Aligned_cols=108  Identities=20%  Similarity=0.389  Sum_probs=98.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC---------EEEEEe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP---------LTITAH   72 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~   72 (116)
                      .|.++|.++.|+| .+.+|++++.|++++||..........+..|      +..|..+.|+|+++         .+++++
T Consensus       357 GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~H------skei~t~~wsp~g~v~~n~~~~~~l~sas  429 (524)
T KOG0273|consen  357 GHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQSNSVHDLQAH------SKEIYTIKWSPTGPVTSNPNMNLMLASAS  429 (524)
T ss_pred             cccCceEEEEECC-CCceEEEecCCCeeEeeecCCCcchhhhhhh------ccceeeEeecCCCCccCCCcCCceEEEee
Confidence            4889999999999 8899999999999999998878888888888      66799999988543         688999


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|++|++||++.+.++..+..|..+|++++|+|+|+++++|+.|
T Consensus       430 ~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~d  473 (524)
T KOG0273|consen  430 FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLD  473 (524)
T ss_pred             cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCC
Confidence            99999999999999999998899999999999999999999876

>PTZ00420 coronin; Provisional

Probab=99.88  E-value=2.7e-20  Score=116.93  Aligned_cols=108  Identities=10%  Similarity=0.086  Sum_probs=90.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--------eeEEEecCCcCcCCCCceeEEEEcCCCCE-EEEEe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--------PVVRIDSSQFGVSGGGGINRVVCHPTLPL-TITAH   72 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~   72 (116)
                      .|.+.|.+++|+|+++++|++++.|+.|++||+.++.        ++..+.+|      ...|.+++|+|++.. +++++
T Consensus        72 gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH------~~~V~sVaf~P~g~~iLaSgS  145 (568)
T PTZ00420         72 GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH------KKKISIIDWNPMNYYIMCSSG  145 (568)
T ss_pred             CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC------CCcEEEEEECCCCCeEEEEEe
Confidence            3778999999999557899999999999999997542        23345666      678999999999874 57899


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|+.|++||+++++....+. +...+.+++|+|+|++|++++.|
T Consensus       146 ~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D  188 (568)
T PTZ00420        146 FDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVG  188 (568)
T ss_pred             CCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecC
Confidence            99999999999988777665 55679999999999999988765

>KOG0316|consensus

Probab=99.87  E-value=9.3e-21  Score=105.71  Aligned_cols=107  Identities=13%  Similarity=0.240  Sum_probs=102.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +.++|.++.|+- +|++.++++.++.+++|+...+..++++.+|      ...|..++.+.|...+++++.|..+.+||+
T Consensus        16 ~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsgh------G~EVlD~~~s~Dnskf~s~GgDk~v~vwDV   88 (307)
T KOG0316|consen   16 AQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGH------GHEVLDAALSSDNSKFASCGGDKAVQVWDV   88 (307)
T ss_pred             cccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCC------CceeeeccccccccccccCCCCceEEEEEc
Confidence            678999999998 8999999999999999999999999999999      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+|+..+.+.+|.+.|..+.|+.+...+++|+.|
T Consensus        89 ~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD  122 (307)
T KOG0316|consen   89 NTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFD  122 (307)
T ss_pred             ccCeeeeecccccceeeEEEecCcceEEEecccc
Confidence            9999999999999999999999999999999876

>KOG0319|consensus

Probab=99.87  E-value=8.3e-21  Score=118.74  Aligned_cols=108  Identities=13%  Similarity=0.151  Sum_probs=102.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++.+| +...+++|+.|...++|+++..+.+..+.+|      ...+.++.|+|....+++++.|.+|+||.
T Consensus       461 aHdKdIN~Vaia~-ndkLiAT~SqDktaKiW~le~~~l~~vLsGH------~RGvw~V~Fs~~dq~laT~SgD~TvKIW~  533 (775)
T KOG0319|consen  461 AHDKDINCVAIAP-NDKLIATGSQDKTAKIWDLEQLRLLGVLSGH------TRGVWCVSFSKNDQLLATCSGDKTVKIWS  533 (775)
T ss_pred             hhcccccceEecC-CCceEEecccccceeeecccCceEEEEeeCC------ccceEEEEeccccceeEeccCCceEEEEE
Confidence            3788999999999 7799999999999999999988999999999      77899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+..+++++.+|...|....|-.+++.|++++.|
T Consensus       534 is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad  568 (775)
T KOG0319|consen  534 ISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD  568 (775)
T ss_pred             eccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence            99999999999999999999999999999998865

>KOG0279|consensus

Probab=99.87  E-value=2.3e-20  Score=105.91  Aligned_cols=109  Identities=22%  Similarity=0.288  Sum_probs=100.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-----CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-----TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .|++.|+.++-.+.+.+.+++++.|..+.+|++.     .|.+++.+++|      +..|..+..++++.++++++.|+.
T Consensus        13 gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GH------sH~v~dv~~s~dg~~alS~swD~~   86 (315)
T KOG0279|consen   13 GHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGH------SHFVSDVVLSSDGNFALSASWDGT   86 (315)
T ss_pred             CCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeecc------ceEecceEEccCCceEEeccccce
Confidence            4789999999988678899999999999999875     46678999998      778999999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++||+.+++..+.+.+|...|.+++|++|.+.+++||.|
T Consensus        87 lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD  126 (315)
T KOG0279|consen   87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD  126 (315)
T ss_pred             EEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCc
Confidence            9999999999999999999999999999999999999987

>KOG0285|consensus

Probab=99.87  E-value=3.1e-21  Score=112.91  Aligned_cols=108  Identities=18%  Similarity=0.233  Sum_probs=102.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.++++.| ...++++|+.|+.+.|||+.+++...++.+|      -..+..+++++..++++++++|+.|+.||
T Consensus       149 gHlgWVr~vavdP-~n~wf~tgs~DrtikIwDlatg~LkltltGh------i~~vr~vavS~rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  149 GHLGWVRSVAVDP-GNEWFATGSADRTIKIWDLATGQLKLTLTGH------IETVRGVAVSKRHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             hccceEEEEeeCC-CceeEEecCCCceeEEEEcccCeEEEeecch------hheeeeeeecccCceEEEecCCCeeEEEe
Confidence            3789999999999 7799999999999999999999999999999      56899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++..+.++.+.+|-..|.+++..|.-..|++++.|
T Consensus       222 Le~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grD  256 (460)
T KOG0285|consen  222 LEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRD  256 (460)
T ss_pred             chhhhhHHHhccccceeEEEeccccceeEEecCCc
Confidence            99999999999999999999999999999999987

>KOG0315|consensus

Probab=99.86  E-value=9.9e-20  Score=102.26  Aligned_cols=113  Identities=18%  Similarity=0.246  Sum_probs=92.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCc-------------------Cc-------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF-------------------GV-------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-------------------~~-------------   50 (116)
                      |++.|+++.|.- +++++++|++||.++|||++.....+.+.....                   +.             
T Consensus        82 h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~  160 (311)
T KOG0315|consen   82 HTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH  160 (311)
T ss_pred             cCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc
Confidence            678899999988 889999999999999999875332222211110                   00             


Q ss_pred             ----------------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133         51 ----------------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus        51 ----------------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                                                                          .|++.+....++|++++|++++.|.+++
T Consensus       161 ~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~  240 (311)
T KOG0315|consen  161 ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVK  240 (311)
T ss_pred             ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEE
Confidence                                                                6777888899999999999999999999


Q ss_pred             EEECCCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+.++. +....+.+|...+.+.+|+.||++|+|++.|
T Consensus       241 iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd  279 (311)
T KOG0315|consen  241 IWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSD  279 (311)
T ss_pred             EEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCC
Confidence            9999877 5566778888999999999999999999876

>PTZ00421 coronin; Provisional

Probab=99.85  E-value=2.5e-19  Score=111.63  Aligned_cols=106  Identities=19%  Similarity=0.197  Sum_probs=92.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.+++|+|+..++|++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++.++++++.|+.|++||+
T Consensus       124 H~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h------~~~V~sla~spdG~lLatgs~Dg~IrIwD~  197 (493)
T PTZ00421        124 HTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH------SDQITSLEWNLDGSLLCTTSKDKKLNIIDP  197 (493)
T ss_pred             CCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC------CCceEEEEEECCCCEEEEecCCCEEEEEEC
Confidence            67889999999954579999999999999999999888888887      668999999999999999999999999999


Q ss_pred             CCCeEEEEeeccccc-EEEEEECCCCcEEEeee
Q psy17133         83 VSGKLVHSMVAHLDA-VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~s  114 (116)
                      ++++.+..+..|.+. ...+.|.+++..+++++
T Consensus       198 rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G  230 (493)
T PTZ00421        198 RDGTIVSSVEAHASAKSQRCLWAKRKDLIITLG  230 (493)
T ss_pred             CCCcEEEEEecCCCCcceEEEEcCCCCeEEEEe
Confidence            999988888877653 45678899888777654

>KOG0645|consensus

Probab=99.85  E-value=2.5e-19  Score=101.50  Aligned_cols=109  Identities=14%  Similarity=0.195  Sum_probs=91.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      .|.+++..++|+|..|..|++++.|+.|++|+...+..   ...+ .+|      ...|.+++|+|.|+++++++.|.++
T Consensus        12 gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~h------krsVRsvAwsp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen   12 GHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGH------KRSVRSVAWSPHGRYLASASFDATV   85 (312)
T ss_pred             CCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccc------hheeeeeeecCCCcEEEEeeccceE
Confidence            36788999999993377999999999999999984322   2222 233      6789999999999999999999999


Q ss_pred             EEEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         78 RFFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .||.-..+  +++..+.+|...|.+++|+++|++||++++|
T Consensus        86 ~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD  126 (312)
T KOG0645|consen   86 VIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD  126 (312)
T ss_pred             EEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence            99986543  5678889999999999999999999999986

>KOG0302|consensus

Probab=99.85  E-value=3.5e-20  Score=108.92  Aligned_cols=110  Identities=15%  Similarity=0.234  Sum_probs=90.9

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.|+..|..++|+|.+...+++++-|+.|+|||++.+...  ...+.|      .+.|+.+.|+.+..+|++|++||+++
T Consensus       254 ~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh------~sDVNVISWnr~~~lLasG~DdGt~~  327 (440)
T KOG0302|consen  254 TGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAH------NSDVNVISWNRREPLLASGGDDGTLS  327 (440)
T ss_pred             cccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeecc------CCceeeEEccCCcceeeecCCCceEE
Confidence            3588999999999988889999999999999999977332  223556      67899999999888999999999999


Q ss_pred             EEECCC---CeEEEEeecccccEEEEEECCC-CcEEEeeecC
Q psy17133         79 FFDNVS---GKLVHSMVAHLDAVTSLAVDPQ-GLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d  116 (116)
                      |||+++   ++.+..+..|..+|+++.|+|. ...|++++.|
T Consensus       328 iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D  369 (440)
T KOG0302|consen  328 IWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED  369 (440)
T ss_pred             EEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence            999874   5667788899999999999994 4455555543

>KOG1407|consensus

Probab=99.85  E-value=3e-20  Score=104.80  Aligned_cols=114  Identities=13%  Similarity=0.119  Sum_probs=98.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------------------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------------------------   50 (116)
                      |.+.|-.+.|.|...+.+++++.+..+++||...+++...........                                
T Consensus        63 h~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~  142 (313)
T KOG1407|consen   63 HTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVN  142 (313)
T ss_pred             CCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceee
Confidence            567788899998788899999999999999998887766554332211                                


Q ss_pred             --------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133         51 --------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus        51 --------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                                                                  .|+....++.|+|+|+++|+|+.|..+.+||++.--
T Consensus       143 ~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi  222 (313)
T KOG1407|consen  143 EEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELI  222 (313)
T ss_pred             hhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhh
Confidence                                                        677778899999999999999999999999999988


Q ss_pred             EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         87 LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++.+..+.-+|+.++|+.+|++||++|.|
T Consensus       223 C~R~isRldwpVRTlSFS~dg~~lASaSED  252 (313)
T KOG1407|consen  223 CERCISRLDWPVRTLSFSHDGRMLASASED  252 (313)
T ss_pred             hheeeccccCceEEEEeccCcceeeccCcc
Confidence            999998889999999999999999999987

>KOG0276|consensus

Probab=99.85  E-value=9.2e-21  Score=117.31  Aligned_cols=108  Identities=19%  Similarity=0.287  Sum_probs=101.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~   80 (116)
                      |+-.|.+++|+|.+.+.+++++.|++|++|.+....+.+++++|      ...|+++++-+  |.++++++++|..+++|
T Consensus       139 H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------ekGVN~Vdyy~~gdkpylIsgaDD~tiKvW  212 (794)
T KOG0276|consen  139 HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGH------EKGVNCVDYYTGGDKPYLISGADDLTIKVW  212 (794)
T ss_pred             cceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecc------ccCcceEEeccCCCcceEEecCCCceEEEe
Confidence            67789999999999999999999999999999988899999999      67899999986  45799999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |.++..+++++.+|..-|+.++|+|.-.++++||.|
T Consensus       213 DyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsED  248 (794)
T KOG0276|consen  213 DYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSED  248 (794)
T ss_pred             ecchHHHHHHhhcccccceEEEecCCCcEEEEecCC
Confidence            999999999999999999999999999999999987

>KOG0295|consensus

Probab=99.85  E-value=1.7e-19  Score=105.52  Aligned_cols=108  Identities=17%  Similarity=0.270  Sum_probs=97.4

Q ss_pred             CCCCceEEEEccC--------------CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133          3 YNGTPTSIDFVRD--------------ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT   68 (116)
Q Consensus         3 ~~~~v~~~~~~~~--------------~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   68 (116)
                      |+-+|.+++|.|.              .++++++++.|+.|++||+.++..+.++.+|      .+-|..++|+|.|++|
T Consensus       276 hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh------dnwVr~~af~p~Gkyi  349 (406)
T KOG0295|consen  276 HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH------DNWVRGVAFSPGGKYI  349 (406)
T ss_pred             cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc------cceeeeeEEcCCCeEE
Confidence            4556777777663              1258899999999999999999999999999      6789999999999999


Q ss_pred             EEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        69 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++.+|+++++||+++++++..+..|..-++++.|..+..+++||+-|
T Consensus       350 ~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVd  397 (406)
T KOG0295|consen  350 LSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVD  397 (406)
T ss_pred             EEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEecccc
Confidence            999999999999999999999999999999999999999999999865

>KOG0318|consensus

Probab=99.85  E-value=1.4e-19  Score=110.07  Aligned_cols=110  Identities=22%  Similarity=0.388  Sum_probs=95.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |..-|.++.|+| +++++++.+.|+++++||-.+++.+..+...   ..|.+.|..+.|+||+..+++++.|.++++||+
T Consensus       189 HskFV~~VRysP-DG~~Fat~gsDgki~iyDGktge~vg~l~~~---~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdV  264 (603)
T KOG0318|consen  189 HSKFVNCVRYSP-DGSRFATAGSDGKIYIYDGKTGEKVGELEDS---DAHKGSIFALSWSPDSTQFLTVSADKTIKIWDV  264 (603)
T ss_pred             cccceeeEEECC-CCCeEEEecCCccEEEEcCCCccEEEEecCC---CCccccEEEEEECCCCceEEEecCCceEEEEEe
Confidence            667899999999 7999999999999999999999999999832   123789999999999999999999999999998


Q ss_pred             CCC-------------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSG-------------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+.                                           ..++.+.+|...|+++..+|++++|++++.|
T Consensus       265 s~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyD  341 (603)
T KOG0318|consen  265 STNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYD  341 (603)
T ss_pred             eccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccC
Confidence            764                                           2334455778889999999999999999876

>KOG0283|consensus

Probab=99.84  E-value=1.7e-20  Score=118.16  Aligned_cols=112  Identities=15%  Similarity=0.237  Sum_probs=90.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-----------------------eE----EEecC--------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-----------------------VV----RIDSS--------   46 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-----------------------~~----~~~~~--------   46 (116)
                      .|.+.|.++.|++ +|++|++|++|+.|+||.+...+.                       ..    .....        
T Consensus       265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~  343 (712)
T KOG0283|consen  265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS  343 (712)
T ss_pred             ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence            4789999999999 899999999999999998754000                       00    00000        


Q ss_pred             -Cc------------------CcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-C
Q psy17133         47 -QF------------------GVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-Q  106 (116)
Q Consensus        47 -~~------------------~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  106 (116)
                       .+                  ..+|...|..+.|+.++ +|++++.|.++++|++...+++..+. |..-|++++|+| |
T Consensus       344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvD  421 (712)
T KOG0283|consen  344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVD  421 (712)
T ss_pred             CCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccC
Confidence             00                  01778899999999865 78899999999999999999999997 889999999999 8


Q ss_pred             CcEEEeeecC
Q psy17133        107 GLYILSGTYQ  116 (116)
Q Consensus       107 ~~~l~~~s~d  116 (116)
                      .++|++||.|
T Consensus       422 DryFiSGSLD  431 (712)
T KOG0283|consen  422 DRYFISGSLD  431 (712)
T ss_pred             CCcEeecccc
Confidence            8999999987

>KOG0292|consensus

Probab=99.84  E-value=5.3e-20  Score=117.74  Aligned_cols=108  Identities=19%  Similarity=0.267  Sum_probs=103.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      -|.|+|.++.|+| ....+++|++|..|++|+..+.+.+.++.+|      -..|..+.|++.-++++++++|-+|+||+
T Consensus        49 eHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrclftL~GH------lDYVRt~~FHheyPWIlSASDDQTIrIWN  121 (1202)
T KOG0292|consen   49 EHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCLFTLLGH------LDYVRTVFFHHEYPWILSASDDQTIRIWN  121 (1202)
T ss_pred             ccCCccceeeecC-CCCeEEecCCccEEEEEecccceehhhhccc------cceeEEeeccCCCceEEEccCCCeEEEEe
Confidence            3889999999999 7899999999999999999999999999999      66899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++++++..+.+|..-|.+..|+|....++++|.|
T Consensus       122 wqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLD  156 (1202)
T KOG0292|consen  122 WQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLD  156 (1202)
T ss_pred             ccCCceEEEEecCceEEEeeccCCccceEEEeccc
Confidence            99999999999999999999999999999999976

>KOG0319|consensus

Probab=99.84  E-value=6.2e-20  Score=114.92  Aligned_cols=108  Identities=15%  Similarity=0.137  Sum_probs=102.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...+.++.|+| ..+.+++++.|.+|+||.+.+...+++|.+|      .+.|..+.|-.+++.+++++.||.+++|+
T Consensus       503 GH~RGvw~V~Fs~-~dq~laT~SgD~TvKIW~is~fSClkT~eGH------~~aVlra~F~~~~~qliS~~adGliKlWn  575 (775)
T KOG0319|consen  503 GHTRGVWCVSFSK-NDQLLATCSGDKTVKIWSISTFSCLKTFEGH------TSAVLRASFIRNGKQLISAGADGLIKLWN  575 (775)
T ss_pred             CCccceEEEEecc-ccceeEeccCCceEEEEEeccceeeeeecCc------cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence            3778899999999 7799999999999999999999999999999      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++++.++..|...|++++-+|...+++||+.|
T Consensus       576 ikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~D  610 (775)
T KOG0319|consen  576 IKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGD  610 (775)
T ss_pred             ccchhhhhhhhhccceeEEEeecCccceeEecCCC
Confidence            99999999999999999999999999999998876

>KOG0303|consensus

Probab=99.84  E-value=4.6e-20  Score=109.02  Aligned_cols=108  Identities=16%  Similarity=0.280  Sum_probs=97.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeC
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHD   73 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~   73 (116)
                      .|.++|..++|+|.+.+.|++|++|.+|.+|.+..+       +++..+.+|      ...|.-+.|+|. ...|++++.
T Consensus        79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH------~rrVg~V~wHPtA~NVLlsag~  152 (472)
T KOG0303|consen   79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGH------QRRVGLVQWHPTAPNVLLSAGS  152 (472)
T ss_pred             CccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeec------ceeEEEEeecccchhhHhhccC
Confidence            388999999999988899999999999999998754       356778888      778999999997 568999999


Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.|.+|++.+|+.+-.+. |...|.+++|+.+|..|+|++.|
T Consensus       153 Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckD  194 (472)
T KOG0303|consen  153 DNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKD  194 (472)
T ss_pred             CceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeeccc
Confidence            9999999999999988887 99999999999999999999886

>KOG0285|consensus

Probab=99.84  E-value=1.1e-19  Score=106.46  Aligned_cols=107  Identities=22%  Similarity=0.335  Sum_probs=100.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|++++..| .-+.|++++.|..+++||+++...+..+.+|      ...|..+.+.|....+++++.|++|++||+
T Consensus       234 HlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH------~~~V~~V~~~~~dpqvit~S~D~tvrlWDl  306 (460)
T KOG0285|consen  234 HLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGH------TNPVASVMCQPTDPQVITGSHDSTVRLWDL  306 (460)
T ss_pred             ccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCC------CCcceeEEeecCCCceEEecCCceEEEeee
Confidence            678899999999 7799999999999999999999999999999      778999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..|+....+..|...+++++.+|....++++|.|
T Consensus       307 ~agkt~~tlt~hkksvral~lhP~e~~fASas~d  340 (460)
T KOG0285|consen  307 RAGKTMITLTHHKKSVRALCLHPKENLFASASPD  340 (460)
T ss_pred             ccCceeEeeecccceeeEEecCCchhhhhccCCc
Confidence            9999999999899999999999999999998875

>KOG0645|consensus

Probab=99.84  E-value=6.9e-19  Score=99.72  Aligned_cols=108  Identities=13%  Similarity=0.199  Sum_probs=96.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .|...|..++|+| .+++|++++-|..+.||...++  +.+..+++|      .+.|.+++|+++|.+||+++.|+.+.+
T Consensus        59 ~hkrsVRsvAwsp-~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH------EnEVK~Vaws~sG~~LATCSRDKSVWi  131 (312)
T KOG0645|consen   59 GHKRSVRSVAWSP-HGRYLASASFDATVVIWKKEDGEFECVATLEGH------ENEVKCVAWSASGNYLATCSRDKSVWI  131 (312)
T ss_pred             cchheeeeeeecC-CCcEEEEeeccceEEEeecCCCceeEEeeeecc------ccceeEEEEcCCCCEEEEeeCCCeEEE
Confidence            3778899999999 8899999999999999988754  567888999      789999999999999999999999999


Q ss_pred             EECCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |.+..+   ++...+..|.+.|..+.|+|....|+++|.|
T Consensus       132 We~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYD  171 (312)
T KOG0645|consen  132 WEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYD  171 (312)
T ss_pred             EEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccC
Confidence            998743   4567788999999999999999999999986

>KOG0973|consensus

Probab=99.83  E-value=1.8e-19  Score=116.22  Aligned_cols=107  Identities=17%  Similarity=0.305  Sum_probs=96.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-------C-----------ceeEEEecCCcCcCCCCceeEEEEcCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-------G-----------KPVVRIDSSQFGVSGGGGINRVVCHPT   64 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-------~-----------~~~~~~~~~~~~~~~~~~i~~~~~~~~   64 (116)
                      |.+.|.|+.|+| +|.+|++|++|+.+.+|....       +           +....+.+|      .+.|..++|+|+
T Consensus        68 h~~sv~CVR~S~-dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H------~~DV~Dv~Wsp~  140 (942)
T KOG0973|consen   68 HDGSVNCVRFSP-DGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGH------DSDVLDVNWSPD  140 (942)
T ss_pred             ccCceeEEEECC-CCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecC------CCccceeccCCC
Confidence            789999999999 899999999999999999772       0           133445555      789999999999


Q ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.++++++.|++|.+|+.++.+.+..+.+|...|..+.|+|-|++|++-+.|
T Consensus       141 ~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD  192 (942)
T KOG0973|consen  141 DSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD  192 (942)
T ss_pred             ccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC
Confidence            9999999999999999999999999999999999999999999999998876

>KOG0295|consensus

Probab=99.83  E-value=9.6e-19  Score=102.42  Aligned_cols=113  Identities=19%  Similarity=0.247  Sum_probs=99.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------------------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------------------------   50 (116)
                      |.-.|.++.|-| .++++++++.|..++.|++.++..+..|.+|...+                                
T Consensus       192 h~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k  270 (406)
T KOG0295|consen  192 HEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK  270 (406)
T ss_pred             cccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh
Confidence            566788999999 78999999999999999999998888888876632                                


Q ss_pred             ----CCCCceeEEEEcCC---------------CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         51 ----SGGGGINRVVCHPT---------------LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        51 ----~~~~~i~~~~~~~~---------------~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                          .|+..+.+++|.|.               +.++.+++.|++|++||+.++.++.++.+|...|..++|+|.|++|+
T Consensus       271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~  350 (406)
T KOG0295|consen  271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL  350 (406)
T ss_pred             hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE
Confidence                66777888888761               24888999999999999999999999999999999999999999999


Q ss_pred             eeecC
Q psy17133        112 SGTYQ  116 (116)
Q Consensus       112 ~~s~d  116 (116)
                      ++..|
T Consensus       351 ScaDD  355 (406)
T KOG0295|consen  351 SCADD  355 (406)
T ss_pred             EEecC
Confidence            98876

>KOG0643|consensus

Probab=99.83  E-value=5.1e-19  Score=100.26  Aligned_cols=115  Identities=21%  Similarity=0.291  Sum_probs=98.2

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------   50 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------   50 (116)
                      +.|.+.|.+++.+- +.+.+++|+.|..+++||+++|+++..++......                              
T Consensus        49 ~GHtGavW~~Did~-~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi  127 (327)
T KOG0643|consen   49 DGHTGAVWCCDIDW-DSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI  127 (327)
T ss_pred             cCCCceEEEEEecC-CcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence            46899999999987 78999999999999999999999887766443310                              


Q ss_pred             -----------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEeecccccEEEEEECCCCcEEEe
Q psy17133         51 -----------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        51 -----------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                                       .+...++.+-|.|-++.+++|.++|.|..||.++|+.+ .....|...|++++++||..+++|
T Consensus       128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT  207 (327)
T KOG0643|consen  128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT  207 (327)
T ss_pred             cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe
Confidence                             44467888999999999999999999999999998654 445678889999999999999999


Q ss_pred             eecC
Q psy17133        113 GTYQ  116 (116)
Q Consensus       113 ~s~d  116 (116)
                      +|.|
T Consensus       208 ~s~D  211 (327)
T KOG0643|consen  208 GSKD  211 (327)
T ss_pred             cccC
Confidence            9987

>KOG0284|consensus

Probab=99.83  E-value=3.1e-20  Score=109.92  Aligned_cols=107  Identities=18%  Similarity=0.178  Sum_probs=97.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.++.|++ ++.++++|..++.|++|+.+ .+.+..+..+.     ...|.+++|+|+...++++++|++|+|||.
T Consensus       137 HDs~Vr~m~ws~-~g~wmiSgD~gG~iKyWqpn-mnnVk~~~ahh-----~eaIRdlafSpnDskF~t~SdDg~ikiWdf  209 (464)
T KOG0284|consen  137 HDSPVRTMKWSH-NGTWMISGDKGGMIKYWQPN-MNNVKIIQAHH-----AEAIRDLAFSPNDSKFLTCSDDGTIKIWDF  209 (464)
T ss_pred             hcccceeEEEcc-CCCEEEEcCCCceEEecccc-hhhhHHhhHhh-----hhhhheeccCCCCceeEEecCCCeEEEEec
Confidence            788999999999 89999999999999999987 55566776662     367999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ...+..+.+.+|...|.++.|+|....++++|.|
T Consensus       210 ~~~kee~vL~GHgwdVksvdWHP~kgLiasgskD  243 (464)
T KOG0284|consen  210 RMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKD  243 (464)
T ss_pred             cCCchhheeccCCCCcceeccCCccceeEEccCC
Confidence            9888888899999999999999999999999986

>KOG0275|consensus

Probab=99.82  E-value=5e-21  Score=111.33  Aligned_cols=109  Identities=20%  Similarity=0.308  Sum_probs=102.7

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      |-+..+|.|+.|+. +..++++|+.||+|++|.+.+|+.++.|. .|      ...++++.|+.|+..+.+++.|.++++
T Consensus       260 MMmd~aVlci~FSR-DsEMlAsGsqDGkIKvWri~tG~ClRrFdrAH------tkGvt~l~FSrD~SqiLS~sfD~tvRi  332 (508)
T KOG0275|consen  260 MMMDDAVLCISFSR-DSEMLASGSQDGKIKVWRIETGQCLRRFDRAH------TKGVTCLSFSRDNSQILSASFDQTVRI  332 (508)
T ss_pred             eecccceEEEeecc-cHHHhhccCcCCcEEEEEEecchHHHHhhhhh------ccCeeEEEEccCcchhhcccccceEEE
Confidence            55788999999999 88999999999999999999999999997 56      678999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .-+++|+.++.+++|...|+...|.++|..++++|.|
T Consensus       333 HGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD  369 (508)
T KOG0275|consen  333 HGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD  369 (508)
T ss_pred             eccccchhHHHhcCccccccceEEcCCCCeEEEecCC
Confidence            9999999999999999999999999999999999876

>PTZ00420 coronin; Provisional

Probab=99.82  E-value=3.1e-18  Score=107.86  Aligned_cols=107  Identities=16%  Similarity=0.145  Sum_probs=87.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+|+....+++++.|+.|++||+.+++.+..+..       ...+.+++|+|+|.++++++.|+.|++||+
T Consensus       124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~SlswspdG~lLat~s~D~~IrIwD~  196 (568)
T PTZ00420        124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSSLKWNIKGNLLSGTCVGKHMHIIDP  196 (568)
T ss_pred             CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEEEEECCCCCEEEEEecCCEEEEEEC
Confidence            6778999999994334567889999999999998887766653       356999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEE-----EEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTS-----LAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~s~d  116 (116)
                      ++++.+..+.+|.+.+..     ..|++++.+|++++.|
T Consensus       197 Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d  235 (568)
T PTZ00420        197 RKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFS  235 (568)
T ss_pred             CCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcC
Confidence            999999888888765432     2356888998887653

>KOG0283|consensus

Probab=99.82  E-value=2.3e-19  Score=113.18  Aligned_cols=106  Identities=13%  Similarity=0.155  Sum_probs=91.8

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF   79 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~   79 (116)
                      +.|.+.|.++.|+.+  ++|++++.|.+|++|++...+.+..|...       ..|+|++|+| |.+++++|+-|+.++|
T Consensus       366 ~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn-------dfVTcVaFnPvDDryFiSGSLD~KvRi  436 (712)
T KOG0283|consen  366 KGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHN-------DFVTCVAFNPVDDRYFISGSLDGKVRL  436 (712)
T ss_pred             hccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecC-------CeeEEEEecccCCCcEeecccccceEE
Confidence            358999999999973  89999999999999999988899988654       6799999999 5789999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++...+...-.. -...|++++|.|+|+..+.|+.+
T Consensus       437 WsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~  472 (712)
T KOG0283|consen  437 WSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFN  472 (712)
T ss_pred             eecCcCeeEeehh-hhhhheeEEeccCCceEEEEEec
Confidence            9998777665444 34679999999999999988753

>KOG0273|consensus

Probab=99.81  E-value=1.3e-18  Score=104.70  Aligned_cols=106  Identities=18%  Similarity=0.303  Sum_probs=94.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      -+..|++++|+. +|..|++|+.+|.+++|+.. |..+..+..|      .++|.++.|+.+|.++++++.|+++.+||.
T Consensus       234 ~nkdVT~L~Wn~-~G~~LatG~~~G~~riw~~~-G~l~~tl~~H------kgPI~slKWnk~G~yilS~~vD~ttilwd~  305 (524)
T KOG0273|consen  234 SNKDVTSLDWNN-DGTLLATGSEDGEARIWNKD-GNLISTLGQH------KGPIFSLKWNKKGTYILSGGVDGTTILWDA  305 (524)
T ss_pred             ccCCcceEEecC-CCCeEEEeecCcEEEEEecC-chhhhhhhcc------CCceEEEEEcCCCCEEEeccCCccEEEEec
Confidence            456799999998 89999999999999999975 7788888888      789999999999999999999999999998


Q ss_pred             CCC-----------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSG-----------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++                                         ++..++.+|.+.|.++.|+|.++.|+++|.|
T Consensus       306 ~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD  380 (524)
T KOG0273|consen  306 HTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDD  380 (524)
T ss_pred             cCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCC
Confidence            654                                         2445566788999999999999999999987

>KOG0282|consensus

Probab=99.81  E-value=8e-20  Score=109.87  Aligned_cols=108  Identities=23%  Similarity=0.253  Sum_probs=99.7

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF   79 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~   79 (116)
                      |.|..+|.++.|++ ++..+++++-|+.+++||+++|+.+..|...       ..+.++.++|++ ..+++|+.|+.|+.
T Consensus       255 ~gH~k~Vrd~~~s~-~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~-------~~~~cvkf~pd~~n~fl~G~sd~ki~~  326 (503)
T KOG0282|consen  255 KGHRKPVRDASFNN-CGTSFLSASFDRFLKLWDTETGQVLSRFHLD-------KVPTCVKFHPDNQNIFLVGGSDKKIRQ  326 (503)
T ss_pred             hcchhhhhhhhccc-cCCeeeeeecceeeeeeccccceEEEEEecC-------CCceeeecCCCCCcEEEEecCCCcEEE
Confidence            56889999999999 8899999999999999999999999999765       468999999997 78899999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++++.++.+..|-+.+..+.|-++++.+++.+.|
T Consensus       327 wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd  363 (503)
T KOG0282|consen  327 WDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD  363 (503)
T ss_pred             EeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC
Confidence            9999999999888899999999999999999998875

>KOG0289|consensus

Probab=99.81  E-value=4e-18  Score=101.90  Aligned_cols=110  Identities=13%  Similarity=0.193  Sum_probs=98.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.++|+.+..+| .++++++++.++...+.|.+++..+........    .-.+++..|+|||.++.++..|+.+++||
T Consensus       301 ~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s----~v~~ts~~fHpDgLifgtgt~d~~vkiwd  375 (506)
T KOG0289|consen  301 PHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETS----DVEYTSAAFHPDGLIFGTGTPDGVVKIWD  375 (506)
T ss_pred             cccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccc----cceeEEeeEcCCceEEeccCCCceEEEEE
Confidence            5889999999999 899999999999999999999987766544311    34689999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++......+.+|.++|..++|+.+|=||++++.|
T Consensus       376 lks~~~~a~Fpght~~vk~i~FsENGY~Lat~add  410 (506)
T KOG0289|consen  376 LKSQTNVAKFPGHTGPVKAISFSENGYWLATAADD  410 (506)
T ss_pred             cCCccccccCCCCCCceeEEEeccCceEEEEEecC
Confidence            99998888999999999999999999999999876

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.80  E-value=1.4e-17  Score=96.49  Aligned_cols=107  Identities=22%  Similarity=0.362  Sum_probs=95.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.++|.++.|+| +++.+++++.++.+++|+..+++....+..+      ...+..+.|.|+++.+++++.++.+++|+
T Consensus         7 ~h~~~i~~~~~~~-~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~~~~i~i~~   79 (289)
T cd00200           7 GHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDLETGELLRTLKGH------TGPVRDVAASADGTYLASGSSDKTIRLWD   79 (289)
T ss_pred             ccCCCEEEEEEcC-CCCEEEEeecCcEEEEEEeeCCCcEEEEecC------CcceeEEEECCCCCEEEEEcCCCeEEEEE
Confidence            4789999999999 7899999999999999999988777777777      56788999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+++.+..+..+...+.++.|+|+++++++++.
T Consensus        80 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  113 (289)
T cd00200          80 LETGECVRTLTGHTSYVSSVAFSPDGRILSSSSR  113 (289)
T ss_pred             cCcccceEEEeccCCcEEEEEEcCCCCEEEEecC
Confidence            9988888888888888999999999888888763

>KOG0289|consensus

Probab=99.80  E-value=2e-18  Score=103.16  Aligned_cols=103  Identities=19%  Similarity=0.224  Sum_probs=92.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      +++.+|+| +|..+.+|..|+.+++||+..+..+..|.+|      .+.|..+.|+.+|.+++++++|+.|++||++.-+
T Consensus       350 ~ts~~fHp-DgLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~  422 (506)
T KOG0289|consen  350 YTSAAFHP-DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFSENGYWLATAADDGSVKLWDLRKLK  422 (506)
T ss_pred             eEEeeEcC-CceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEeccCceEEEEEecCCeEEEEEehhhc
Confidence            68899999 8899999999999999999999899999999      7899999999999999999999999999999877


Q ss_pred             EEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133         87 LVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        87 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..+++... ...+.++.|.+.|.+|+.++.|
T Consensus       423 n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~  453 (506)
T KOG0289|consen  423 NFKTIQLDEKKEVNSLSFDQSGTYLGIAGSD  453 (506)
T ss_pred             ccceeeccccccceeEEEcCCCCeEEeecce
Confidence            77766532 3478999999999999988754

>KOG0269|consensus

Probab=99.80  E-value=4.6e-19  Score=111.67  Aligned_cols=108  Identities=18%  Similarity=0.268  Sum_probs=96.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~   81 (116)
                      |+..+..+.|++...++|++|++|+.|++||++..+...++.+.      ...|..+.|+|. +..++++.+.|.+.+||
T Consensus       132 H~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n------SESiRDV~fsp~~~~~F~s~~dsG~lqlWD  205 (839)
T KOG0269|consen  132 HERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN------SESIRDVKFSPGYGNKFASIHDSGYLQLWD  205 (839)
T ss_pred             hccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc------chhhhceeeccCCCceEEEecCCceEEEee
Confidence            77889999999988899999999999999999988878888776      567999999996 67899999999999999


Q ss_pred             CCC-CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++. .+...++..|.+.|.++.|+|++.+|||||.|
T Consensus       206 lRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRD  241 (839)
T KOG0269|consen  206 LRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRD  241 (839)
T ss_pred             ccCchhHHHHhhcccCceEEEeecCCCceeeecCCC
Confidence            974 45567788899999999999999999999987

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=99.80  E-value=1.3e-17  Score=96.64  Aligned_cols=107  Identities=29%  Similarity=0.461  Sum_probs=94.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.+.++.|+| +++.+++++.++.+++||...++.+..+..+      ...+.++.++|++.++++++.++.+++|++
T Consensus       176 ~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~  248 (289)
T cd00200         176 HTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTLRGH------ENGVNSVAFSPDGYLLASGSEDGTIRVWDL  248 (289)
T ss_pred             CccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecchhhc------CCceEEEEEcCCCcEEEEEcCCCcEEEEEc
Confidence            456799999999 7778888888999999999988888887666      568999999999888888888999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++....+..|...+..++|+|++++|++++.|
T Consensus       249 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  282 (289)
T cd00200         249 RTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD  282 (289)
T ss_pred             CCceeEEEccccCCcEEEEEECCCCCEEEEecCC
Confidence            9888888888888899999999999999998865

>KOG0278|consensus

Probab=99.80  E-value=8.8e-18  Score=94.77  Aligned_cols=114  Identities=18%  Similarity=0.267  Sum_probs=95.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|++.|..+.|.. +.+.++++..++.|++||..++..+..+.......                               
T Consensus       141 ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lK  219 (334)
T KOG0278|consen  141 GHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLK  219 (334)
T ss_pred             CCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEecccccccee
Confidence            3788999999998 67888988999999999999998877665432210                               


Q ss_pred             --CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 --SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 --~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                        .-+..|.+..++|+...+++|++|+.++.||..+++.+..+ ++|-++|.++.|+|+|...++||.|
T Consensus       220 s~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSED  288 (334)
T KOG0278|consen  220 SYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSED  288 (334)
T ss_pred             eccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCC
Confidence              22345677888898888999999999999999999998886 7899999999999999999999987

>KOG0318|consensus

Probab=99.80  E-value=7.1e-18  Score=102.83  Aligned_cols=109  Identities=20%  Similarity=0.205  Sum_probs=96.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|.+++|-|...-.++++++|..+.+|+-..-+....+..|      ...|.+++++|||..+++.+.|+++.+||
T Consensus       145 GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~H------skFV~~VRysPDG~~Fat~gsDgki~iyD  218 (603)
T KOG0318|consen  145 GHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREH------SKFVNCVRYSPDGSRFATAGSDGKIYIYD  218 (603)
T ss_pred             ccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeeccccc------ccceeeEEECCCCCeEEEecCCccEEEEc
Confidence            377889999999966668999999999999986655555566666      67899999999999999999999999999


Q ss_pred             CCCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      -++++.+..+.   +|.+.|..++|+||+..++|+|.|
T Consensus       219 Gktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD  256 (603)
T KOG0318|consen  219 GKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD  256 (603)
T ss_pred             CCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence            99999999987   899999999999999999999876

>KOG0647|consensus

Probab=99.79  E-value=3.6e-18  Score=98.14  Aligned_cols=107  Identities=15%  Similarity=0.253  Sum_probs=87.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .+..|.+++|+|....+++.++-|++|++|++.. +..+.. ...+      .+++.+++|+.+|..+++++.|+.+++|
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~------~~PvL~v~WsddgskVf~g~~Dk~~k~w   99 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSH------DGPVLDVCWSDDGSKVFSGGCDKQAKLW   99 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhcc------CCCeEEEEEccCCceEEeeccCCceEEE
Confidence            4678999999996556777889999999999975 343322 2233      6789999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCc--EEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGL--YILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~s~d  116 (116)
                      |+.+++ ..++..|.++|..+.|-+...  .|+|||+|
T Consensus       100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWD  136 (347)
T KOG0647|consen  100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWD  136 (347)
T ss_pred             EccCCC-eeeeeecccceeEEEEecCCCcceeEecccc
Confidence            999985 455667999999999976554  89999987

>KOG0293|consensus

Probab=99.79  E-value=1.6e-18  Score=103.19  Aligned_cols=107  Identities=14%  Similarity=0.162  Sum_probs=93.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      |...|.-+.|++ +|++|++++.|.+..+|.+..-.   ..+++.+|      ..+|..+.|+||.+++++++.+..+.+
T Consensus       223 htdEVWfl~FS~-nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh------~~~V~yi~wSPDdryLlaCg~~e~~~l  295 (519)
T KOG0293|consen  223 HTDEVWFLQFSH-NGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGH------SQPVSYIMWSPDDRYLLACGFDEVLSL  295 (519)
T ss_pred             CCCcEEEEEEcC-CCeeEeeccCCceEEEEEEecCcceeeeeeeecc------cCceEEEEECCCCCeEEecCchHheee
Confidence            678899999999 99999999999999999886433   36677777      678999999999999999999999999


Q ss_pred             EECCCCeEEEEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||..+|.+...+.. +...+.+.+|.|||..+++|+.|
T Consensus       296 wDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d  333 (519)
T KOG0293|consen  296 WDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD  333 (519)
T ss_pred             ccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC
Confidence            99999999887763 35688999999999999999875

>KOG0265|consensus

Probab=99.79  E-value=7.9e-18  Score=96.61  Aligned_cols=108  Identities=18%  Similarity=0.231  Sum_probs=93.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|.+.|+.+.|+| ++..+++++.|..|.+|+.. +.+....+++|      .+.|..+.|.+|++.+++++.|.+++.|
T Consensus        45 gh~geI~~~~F~P-~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgH------sgAVM~l~~~~d~s~i~S~gtDk~v~~w  117 (338)
T KOG0265|consen   45 GHKGEIYTIKFHP-DGSCFASGGSDRAIVLWNVYGDCENFWVLKGH------SGAVMELHGMRDGSHILSCGTDKTVRGW  117 (338)
T ss_pred             CCcceEEEEEECC-CCCeEeecCCcceEEEEeccccccceeeeccc------cceeEeeeeccCCCEEEEecCCceEEEE
Confidence            3789999999999 89999999999999999965 44556677788      7899999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d  116 (116)
                      |.++|+..+.++.|...+..+.-+.-|..|+ +++.|
T Consensus       118 D~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD  154 (338)
T KOG0265|consen  118 DAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDD  154 (338)
T ss_pred             ecccceeeehhccccceeeecCccccCCeEEEecCCC
Confidence            9999999999999999898887555566555 55443

>KOG0282|consensus

Probab=99.79  E-value=5e-19  Score=106.51  Aligned_cols=108  Identities=10%  Similarity=0.138  Sum_probs=95.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|+..|.++.|.|..+.++++++.|+.|++|++-+ ++.+.+|.+|      ...|..++|+++|..+.+++-|+.+++|
T Consensus       212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH------~k~Vrd~~~s~~g~~fLS~sfD~~lKlw  285 (503)
T KOG0282|consen  212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGH------RKPVRDASFNNCGTSFLSASFDRFLKLW  285 (503)
T ss_pred             CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcc------hhhhhhhhccccCCeeeeeecceeeeee
Confidence            37888999999997788999999999999999975 8889999999      6789999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d  116 (116)
                      |.++|+++..+. ....+.++.|.|++ +.+++|+.|
T Consensus       286 DtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd  321 (503)
T KOG0282|consen  286 DTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSD  321 (503)
T ss_pred             ccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCC
Confidence            999999999886 34567899999988 667776654

>KOG0276|consensus

Probab=99.79  E-value=5.6e-18  Score=105.25  Aligned_cols=106  Identities=23%  Similarity=0.347  Sum_probs=96.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .-+|.+..|-+ ..+++++|++|.+|++|+..+++.+..|+.|      +..|.+++.+|..+++.++++|-.|++||.+
T Consensus        55 ~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ekV~~FeAH------~DyIR~iavHPt~P~vLtsSDDm~iKlW~we  127 (794)
T KOG0276|consen   55 EVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEKVKTFEAH------SDYIRSIAVHPTLPYVLTSSDDMTIKLWDWE  127 (794)
T ss_pred             ccchhhheeee-ccceEEEecCCceEEEEecccceeeEEeecc------ccceeeeeecCCCCeEEecCCccEEEEeecc
Confidence            34677888888 7899999999999999999999999999999      6789999999999999999999999999998


Q ss_pred             CCe-EEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         84 SGK-LVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      ..- +.+++.+|..-|..++|+| |.+.++++|.|
T Consensus       128 ~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD  162 (794)
T KOG0276|consen  128 NEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLD  162 (794)
T ss_pred             CceeeeeEEcCcceEEEEEEecCCCccceeeeecc
Confidence            664 4677889999999999999 67899999876

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.79  E-value=3.8e-17  Score=91.35  Aligned_cols=100  Identities=17%  Similarity=0.322  Sum_probs=79.3

Q ss_pred             CCCCceEEEEccCCCcEEEE--eeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133          3 YNGTPTSIDFVRDESTKMVT--AFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI   77 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~--~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i   77 (116)
                      ..++|.+++|+| +++.+++  |..+..+.+||.. ++.+..+...        .++.+.|+|+|++++.++.   .|.+
T Consensus        58 ~~~~I~~~~WsP-~g~~favi~g~~~~~v~lyd~~-~~~i~~~~~~--------~~n~i~wsP~G~~l~~~g~~n~~G~l  127 (194)
T PF08662_consen   58 KEGPIHDVAWSP-NGNEFAVIYGSMPAKVTLYDVK-GKKIFSFGTQ--------PRNTISWSPDGRFLVLAGFGNLNGDL  127 (194)
T ss_pred             CCCceEEEEECc-CCCEEEEEEccCCcccEEEcCc-ccEeEeecCC--------CceEEEECCCCCEEEEEEccCCCcEE
Confidence            346799999999 6676544  3456799999996 6677776533        5788999999999998764   4679


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+||.++.+.+.... | ..+..++|+|+|++|++++
T Consensus       128 ~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~  162 (194)
T PF08662_consen  128 EFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATAT  162 (194)
T ss_pred             EEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEE
Confidence            999999888887765 3 3478999999999999875

>KOG0643|consensus

Probab=99.79  E-value=2.8e-17  Score=93.35  Aligned_cols=106  Identities=18%  Similarity=0.163  Sum_probs=97.4

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      +.|+.+++.+.|+. +|++|.+++.|....+|-...|+.+.++.+|      ++.|++++++-+.+.+++++.|.++++|
T Consensus         7 ~GHERplTqiKyN~-eGDLlFscaKD~~~~vw~s~nGerlGty~GH------tGavW~~Did~~s~~liTGSAD~t~kLW   79 (327)
T KOG0643|consen    7 QGHERPLTQIKYNR-EGDLLFSCAKDSTPTVWYSLNGERLGTYDGH------TGAVWCCDIDWDSKHLITGSADQTAKLW   79 (327)
T ss_pred             ccCccccceEEecC-CCcEEEEecCCCCceEEEecCCceeeeecCC------CceEEEEEecCCcceeeeccccceeEEE
Confidence            45899999999998 8999999999999999998889999999999      7899999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |+++|+.+.++. ....|..+.|+++|++++...
T Consensus        80 Dv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~t  112 (327)
T KOG0643|consen   80 DVETGKQLATWK-TNSPVKRVDFSFGGNLILAST  112 (327)
T ss_pred             EcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEe
Confidence            999999999887 456799999999999876554

>KOG0265|consensus

Probab=99.79  E-value=7.6e-18  Score=96.68  Aligned_cols=114  Identities=18%  Similarity=0.231  Sum_probs=89.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.+.|..+.|.+ +++.+++++.|.+++.||.++|+..+.+++|...+                               
T Consensus        88 gHsgAVM~l~~~~-d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~  166 (338)
T KOG0265|consen   88 GHSGAVMELHGMR-DGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE  166 (338)
T ss_pred             cccceeEeeeecc-CCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc
Confidence            4889999999999 88999999999999999999999998888884421                               


Q ss_pred             -----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 -----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 -----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                           ....+++++.|..++..+.+++-|+.|++||++....+..+.+|...|+.+..+|+|.++.+-+.|
T Consensus       167 ~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd  237 (338)
T KOG0265|consen  167 AIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMD  237 (338)
T ss_pred             hhhccccceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCcccccccc
Confidence                 112345556666666666666666666666666667788888999999999999999998877654

>KOG0296|consensus

Probab=99.78  E-value=3e-17  Score=96.28  Aligned_cols=108  Identities=12%  Similarity=0.159  Sum_probs=99.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...+++++.+| +.+++++|+.|..-++|++.++....++.+|      ...|+++.|+.+|.+++++..+|.|++|.
T Consensus        62 ~H~~svFavsl~P-~~~l~aTGGgDD~AflW~~~~ge~~~eltgH------KDSVt~~~FshdgtlLATGdmsG~v~v~~  134 (399)
T KOG0296|consen   62 KHTDSVFAVSLHP-NNNLVATGGGDDLAFLWDISTGEFAGELTGH------KDSVTCCSFSHDGTLLATGDMSGKVLVFK  134 (399)
T ss_pred             hcCCceEEEEeCC-CCceEEecCCCceEEEEEccCCcceeEecCC------CCceEEEEEccCceEEEecCCCccEEEEE
Confidence            4889999999999 8899999999999999999999999999999      66899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..++.....+......+.-+.|+|.+.+|+.|+.|
T Consensus       135 ~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~D  169 (399)
T KOG0296|consen  135 VSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTD  169 (399)
T ss_pred             cccCceEEEeecccCceEEEEecccccEEEeecCC
Confidence            99999888887566678889999999999998876

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.78  E-value=5.4e-17  Score=106.59  Aligned_cols=106  Identities=8%  Similarity=0.149  Sum_probs=92.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~~   82 (116)
                      ...+.++.|++..+.++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+| ++.++++++.|+.|++||+
T Consensus       532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H------~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~  605 (793)
T PLN00181        532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEH------EKRVWSIDYSSADPTLLASGSDDGSVKLWSI  605 (793)
T ss_pred             cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCC------CCCEEEEEEcCCCCCEEEEEcCCCEEEEEEC
Confidence            4567889998856789999999999999999988888888888      67899999997 6889999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEEC-CCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s~d  116 (116)
                      .++..+..+..+ ..+.++.|+ +++.+|++|+.|
T Consensus       606 ~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~d  639 (793)
T PLN00181        606 NQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSAD  639 (793)
T ss_pred             CCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCC
Confidence            999888877644 568899995 579999999865

>KOG0275|consensus

Probab=99.77  E-value=2.2e-19  Score=104.62  Aligned_cols=112  Identities=14%  Similarity=0.181  Sum_probs=94.8

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      -+.+.|..|+| +++++++++.||-+.+|+..+|+..+.++...  ...-+...+.+++|+.|..-+++|+.||.|++|.
T Consensus       213 KSh~EcA~FSP-DgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr  291 (508)
T KOG0275|consen  213 KSHVECARFSP-DGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR  291 (508)
T ss_pred             ccchhheeeCC-CCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence            35678899999 89999999999999999999887665544221  1111245789999999999999999999999999


Q ss_pred             CCCCeEEEEee-cccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMV-AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++|.+++.+. .|...|.++.|+.|+..+++++.|
T Consensus       292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD  327 (508)
T KOG0275|consen  292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD  327 (508)
T ss_pred             EecchHHHHhhhhhccCeeEEEEccCcchhhccccc
Confidence            99999998886 789999999999999999998876

>KOG0292|consensus

Probab=99.77  E-value=2.1e-18  Score=110.65  Aligned_cols=106  Identities=23%  Similarity=0.408  Sum_probs=100.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +.++..++|+| ...+++++--+|.|++||..-+..+..|..|      .++|..++|+|+++++++|++|-.|++|+.+
T Consensus         9 SsRvKglsFHP-~rPwILtslHsG~IQlWDYRM~tli~rFdeH------dGpVRgv~FH~~qplFVSGGDDykIkVWnYk   81 (1202)
T KOG0292|consen    9 SSRVKGLSFHP-KRPWILTSLHSGVIQLWDYRMGTLIDRFDEH------DGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK   81 (1202)
T ss_pred             cccccceecCC-CCCEEEEeecCceeeeehhhhhhHHhhhhcc------CCccceeeecCCCCeEEecCCccEEEEEecc
Confidence            56789999999 7899999999999999999989999999999      7899999999999999999999999999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.++.+|-.-|+.+.|++...|++++|.|
T Consensus        82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDD  114 (1202)
T KOG0292|consen   82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDD  114 (1202)
T ss_pred             cceehhhhccccceeEEeeccCCCceEEEccCC
Confidence            999999999999999999999999999999987

>KOG0264|consensus

Probab=99.77  E-value=9.2e-18  Score=100.21  Aligned_cols=108  Identities=16%  Similarity=0.218  Sum_probs=90.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--CceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~   79 (116)
                      |...|..++|++.+.+.+++.++|+.+.|||.++  .+.....+.|      .+.+++++|+|- +.+||+++.|++|.+
T Consensus       226 h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah------~~~vn~~~fnp~~~~ilAT~S~D~tV~L  299 (422)
T KOG0264|consen  226 HEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAH------SAEVNCVAFNPFNEFILATGSADKTVAL  299 (422)
T ss_pred             CCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccccc------CCceeEEEeCCCCCceEEeccCCCcEEE
Confidence            6788999999998778889999999999999994  4555566666      789999999996 568899999999999


Q ss_pred             EECCCC-eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         80 FDNVSG-KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ||+++- +.+..+.+|...|..+.|+|... .|++.+.|
T Consensus       300 wDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D  338 (422)
T KOG0264|consen  300 WDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD  338 (422)
T ss_pred             eechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence            999864 45788889999999999999654 66666654

>KOG1539|consensus

Probab=99.77  E-value=7.4e-17  Score=102.70  Aligned_cols=113  Identities=19%  Similarity=0.217  Sum_probs=93.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.++|++++... -++.+++++.+|.+.+||......+..+....+..                               
T Consensus       491 ah~~~V~gla~D~-~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv  569 (910)
T KOG1539|consen  491 AHKGEVTGLAVDG-TNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV  569 (910)
T ss_pred             cccCceeEEEecC-CCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence            3678899999987 56788999999999999998665444443222110                               


Q ss_pred             ----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 ----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                          +|.+.+++++|+|||+++++++.|++|++||+.++.++-.+. -..+..++.|+|+|.+|||+..|
T Consensus       570 R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd  638 (910)
T KOG1539|consen  570 REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVD  638 (910)
T ss_pred             HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEec
Confidence                789999999999999999999999999999999999988776 45678899999999999997654

>KOG1445|consensus

Probab=99.77  E-value=1.5e-18  Score=108.40  Aligned_cols=108  Identities=21%  Similarity=0.295  Sum_probs=95.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d   74 (116)
                      ....|+++.|.|-+.+.|+++++++.|.+|.+..+       .+...+..|      ...|.++.|+|- ...+++++.|
T Consensus       626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h------~eKI~slRfHPLAadvLa~asyd  699 (1012)
T KOG1445|consen  626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIH------GEKITSLRFHPLAADVLAVASYD  699 (1012)
T ss_pred             cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecc------cceEEEEEecchhhhHhhhhhcc
Confidence            44568999999999999999999999999998743       344566666      668999999995 5688999999


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+|++||+.+++....+.+|.+.|.+++|+|+|+.+++.+.|
T Consensus       700 ~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKD  741 (1012)
T KOG1445|consen  700 STIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKD  741 (1012)
T ss_pred             ceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecC
Confidence            999999999999998999999999999999999999999876

>KOG0264|consensus

Probab=99.76  E-value=3.6e-17  Score=97.71  Aligned_cols=109  Identities=16%  Similarity=0.211  Sum_probs=90.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~   79 (116)
                      .|.+.+.+++|+|.++..|++++.|++|.+||++.. +++..+.+|      ...|..+.|+|. ...+++++.|+.+.+
T Consensus       270 ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------~dev~~V~WSPh~etvLASSg~D~rl~v  343 (422)
T KOG0264|consen  270 AHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGH------EDEVFQVEWSPHNETVLASSGTDRRLNV  343 (422)
T ss_pred             ccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCC------CcceEEEEeCCCCCceeEecccCCcEEE
Confidence            478999999999988889999999999999999864 468888998      678999999998 568899999999999


Q ss_pred             EECCCC--------------eEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133         80 FDNVSG--------------KLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ  116 (116)
Q Consensus        80 ~~~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d  116 (116)
                      ||+..-              +++..-.+|...|..+.|+|...+++ +.+.|
T Consensus       344 WDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD  395 (422)
T KOG0264|consen  344 WDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED  395 (422)
T ss_pred             EeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC
Confidence            998531              23444558889999999999887654 55544

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.76  E-value=1.6e-16  Score=104.37  Aligned_cols=107  Identities=16%  Similarity=0.209  Sum_probs=91.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc-CCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH-PTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~~i~~~   80 (116)
                      .|.+.|.+++|+|.++.+|++++.|+.|++||+.++..+..+..+       ..+.++.|+ +++..+++++.|+.|++|
T Consensus       573 ~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~~~g~~latgs~dg~I~iw  645 (793)
T PLN00181        573 EHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPSESGRSLAFGSADHKVYYY  645 (793)
T ss_pred             CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence            377889999999757789999999999999999988888777654       468889995 568999999999999999


Q ss_pred             ECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+++.+ .+..+.+|...|..+.|. ++.+|++++.|
T Consensus       646 D~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D  681 (793)
T PLN00181        646 DLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTD  681 (793)
T ss_pred             ECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECC
Confidence            998765 456677888899999997 67889998876

>KOG0294|consensus

Probab=99.76  E-value=5.2e-17  Score=93.91  Aligned_cols=106  Identities=15%  Similarity=0.293  Sum_probs=90.2

Q ss_pred             CCCCCceEEEEccCCCc--EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDEST--KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~--~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      -|.+.|+++.|.+ ...  .|++|++||.|.+|+......+..+++|      .+.|+.++++|.+++..+.+.|+.++.
T Consensus        81 ~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H------~~~Vt~lsiHPS~KLALsVg~D~~lr~  153 (362)
T KOG0294|consen   81 SHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAH------KGQVTDLSIHPSGKLALSVGGDQVLRT  153 (362)
T ss_pred             ccccceEEEEecC-CcchhheeeecCCCcEEEEEcCCeEEeeeeccc------ccccceeEecCCCceEEEEcCCceeee
Confidence            3789999999998 443  8999999999999999999999999999      678999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++-.|+.-..+.- ......+.|+|.|.+++.++.
T Consensus       154 WNLV~Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~  188 (362)
T KOG0294|consen  154 WNLVRGRVAFVLNL-KNKATLVSWSPQGDHFVVSGR  188 (362)
T ss_pred             ehhhcCccceeecc-CCcceeeEEcCCCCEEEEEec
Confidence            99998887665542 223345899999998876654

>KOG0291|consensus

Probab=99.76  E-value=5.7e-17  Score=102.48  Aligned_cols=105  Identities=14%  Similarity=0.255  Sum_probs=95.8

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .+|..+.|+. .|++|+.++ .-|++-+|+..+...+....+|      ...+++++++|||+++++|++|+.|++||..
T Consensus       308 ~~I~t~~~N~-tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH------~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~  380 (893)
T KOG0291|consen  308 QKILTVSFNS-TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH------SDRITSLAYSPDGQLIATGAEDGKVKVWNTQ  380 (893)
T ss_pred             ceeeEEEecc-cCCEEEEcCCccceEEEEEeeccceeeecccc------ccceeeEEECCCCcEEEeccCCCcEEEEecc
Confidence            4678899987 789998876 4589999999988888888888      5689999999999999999999999999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+-+..++..|...|+.+.|+..++.+++.|.|
T Consensus       381 SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD  413 (893)
T KOG0291|consen  381 SGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD  413 (893)
T ss_pred             CceEEEEeccCCCceEEEEEEecCCEEEEeecC
Confidence            999999999999999999999999999999876

>KOG0281|consensus

Probab=99.76  E-value=5.7e-18  Score=99.37  Aligned_cols=109  Identities=17%  Similarity=0.294  Sum_probs=88.6

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------------------------
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------------------------   50 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------------------------   50 (116)
                      +.|+|.|.|+.|..   ..+++|+.|.+|++||+++++++..+-+|-..+                              
T Consensus       234 ~GHtGSVLCLqyd~---rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~i  310 (499)
T KOG0281|consen  234 TGHTGSVLCLQYDE---RVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDI  310 (499)
T ss_pred             hcCCCcEEeeeccc---eEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHH
Confidence            46899999999864   699999999999999999998887766654432                              


Q ss_pred             -------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 -------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 -------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                             +|...|+.+.|+  .+++++++.|.+|++|++.+++.++++.+|...|-++.+  .++++++||.|
T Consensus       311 t~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSD  379 (499)
T KOG0281|consen  311 TLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD  379 (499)
T ss_pred             HHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCC
Confidence                   666667777664  569999999999999999999999999988877766544  67788888865

>KOG0277|consensus

Probab=99.75  E-value=6.5e-17  Score=91.29  Aligned_cols=108  Identities=17%  Similarity=0.152  Sum_probs=93.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~   81 (116)
                      |...|.++.|++.++..+++++-|++|++|+..-++.+.+|.+|      ...|....|+|. +.++++++.|+.+++||
T Consensus       103 H~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh------~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwd  176 (311)
T KOG0277|consen  103 HKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGH------NSCIYQAAFSPHIPNLFASASGDGTLRLWD  176 (311)
T ss_pred             hhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCC------ccEEEEEecCCCCCCeEEEccCCceEEEEE
Confidence            56789999999977788888999999999999988899999999      678999999996 67999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      ++..-....+..|...+.++.|+. +.+.++|++.|
T Consensus       177 vr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd  212 (311)
T KOG0277|consen  177 VRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVD  212 (311)
T ss_pred             ecCCCceeEEEeccceeEeecccccCCcEEEecCCC
Confidence            975444344777888999999987 67788888765

>KOG1407|consensus

Probab=99.75  E-value=5e-17  Score=91.99  Aligned_cols=106  Identities=12%  Similarity=0.085  Sum_probs=95.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |+....|+.|+| +|+++++|+.|-.+.+||++..-.++.+.-.      .-+|..+.|+.+|+.||++++|..|-|=++
T Consensus       188 H~snCicI~f~p-~GryfA~GsADAlvSLWD~~ELiC~R~isRl------dwpVRTlSFS~dg~~lASaSEDh~IDIA~v  260 (313)
T KOG1407|consen  188 HPSNCICIEFDP-DGRYFATGSADALVSLWDVDELICERCISRL------DWPVRTLSFSHDGRMLASASEDHFIDIAEV  260 (313)
T ss_pred             CCcceEEEEECC-CCceEeeccccceeeccChhHhhhheeeccc------cCceEEEEeccCcceeeccCccceEEeEec
Confidence            677788999999 8999999999999999999877777777766      568999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++|..+..+. +.++...++|+|....||-++.|
T Consensus       261 etGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  261 ETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             ccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence            9999998887 67788999999999999877664

>KOG0296|consensus

Probab=99.75  E-value=1.6e-16  Score=93.32  Aligned_cols=108  Identities=20%  Similarity=0.258  Sum_probs=97.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|-..|+++.|+. ++.+|++|..+|.|++|...++.....+...      -..+.=+.|+|.+.+++.|+.||.+.+|.
T Consensus       104 gHKDSVt~~~Fsh-dgtlLATGdmsG~v~v~~~stg~~~~~~~~e------~~dieWl~WHp~a~illAG~~DGsvWmw~  176 (399)
T KOG0296|consen  104 GHKDSVTCCSFSH-DGTLLATGDMSGKVLVFKVSTGGEQWKLDQE------VEDIEWLKWHPRAHILLAGSTDGSVWMWQ  176 (399)
T ss_pred             CCCCceEEEEEcc-CceEEEecCCCccEEEEEcccCceEEEeecc------cCceEEEEecccccEEEeecCCCcEEEEE
Confidence            3677899999999 8999999999999999999999887777643      35688899999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+....+.+.+|..++++-.|.|+|+.++++..|
T Consensus       177 ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d  211 (399)
T KOG0296|consen  177 IPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD  211 (399)
T ss_pred             CCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence            99888888999999999999999999999988654

>KOG2394|consensus

Probab=99.75  E-value=1.2e-17  Score=102.22  Aligned_cols=95  Identities=20%  Similarity=0.277  Sum_probs=87.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .+.|..++|+| ++++|++.+.|+.++|+|..+.+.+..++..      -+...+++|+|||++|++|++|-.|.+|.+.
T Consensus       290 ~g~in~f~FS~-DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY------FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~  362 (636)
T KOG2394|consen  290 EGSINEFAFSP-DGKYLATVSQDGFLRIFDFDTQELLGVMKSY------FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE  362 (636)
T ss_pred             cccccceeEcC-CCceEEEEecCceEEEeeccHHHHHHHHHhh------ccceEEEEEcCCccEEEecCCcceEEEEEec
Confidence            46789999999 8999999999999999999988887777766      4679999999999999999999999999999


Q ss_pred             CCeEEEEeecccccEEEEEECC
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      .++.+..-.+|..+|+.++|+|
T Consensus       363 erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  363 ERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             cceEEEeccccccceeeEeecc
Confidence            9999998999999999999986

>KOG0294|consensus

Probab=99.75  E-value=9.1e-17  Score=92.93  Aligned_cols=105  Identities=24%  Similarity=0.314  Sum_probs=95.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~~   80 (116)
                      |.+.+++++.+.   .++++|+.|.+|+|||+....++..+..|      .+.|+++.|.+.-.  .++++++||.|.+|
T Consensus        42 H~~sitavAVs~---~~~aSGssDetI~IYDm~k~~qlg~ll~H------agsitaL~F~~~~S~shLlS~sdDG~i~iw  112 (362)
T KOG0294|consen   42 HAGSITALAVSG---PYVASGSSDETIHIYDMRKRKQLGILLSH------AGSITALKFYPPLSKSHLLSGSDDGHIIIW  112 (362)
T ss_pred             cccceeEEEecc---eeEeccCCCCcEEEEeccchhhhcceecc------ccceEEEEecCCcchhheeeecCCCcEEEE
Confidence            788999999854   89999999999999999988888888888      78899999998754  99999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +...=+.+..+++|.+.|+.++.+|.++.-++.+.|
T Consensus       113 ~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D  148 (362)
T KOG0294|consen  113 RVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGD  148 (362)
T ss_pred             EcCCeEEeeeecccccccceeEecCCCceEEEEcCC
Confidence            999889999999999999999999999988877765

>KOG0641|consensus

Probab=99.75  E-value=2.5e-16  Score=88.09  Aligned_cols=112  Identities=15%  Similarity=0.282  Sum_probs=93.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |++.|.++. + .++-++++|++|..|++||+.-...+..+...... ....+.+..+++.|.|++++++..|....+||
T Consensus       182 htghilaly-s-wn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd  259 (350)
T KOG0641|consen  182 HTGHILALY-S-WNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD  259 (350)
T ss_pred             CcccEEEEE-E-ecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence            667777663 2 26689999999999999999877777766433211 11235689999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++.++.++.+..|...|+++.|+|..-++++++.|
T Consensus       260 irg~r~iq~f~phsadir~vrfsp~a~yllt~syd  294 (350)
T KOG0641|consen  260 IRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD  294 (350)
T ss_pred             eeCCceeeeeCCCccceeEEEeCCCceEEEEeccc
Confidence            99999999999999999999999999999999876

>KOG1273|consensus

Probab=99.74  E-value=6.2e-17  Score=93.88  Aligned_cols=95  Identities=15%  Similarity=0.172  Sum_probs=85.0

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      ...++.|++ .|.++++|..+|.+.|||+.+...-+.+.+|      -.+|.+++|+++|+.+++++.|..+.+||+..|
T Consensus        25 ~a~~~~Fs~-~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH------~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~g   97 (405)
T KOG1273|consen   25 LAECCQFSR-WGDYLAVGCANGRVVIYDFDTFRIARMLSAH------VRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKG   97 (405)
T ss_pred             ccceEEecc-CcceeeeeccCCcEEEEEccccchhhhhhcc------ccceeEEEecCCCCEeeeecCCceeEEEeccCC
Confidence            368899999 8999999999999999999998877777788      678999999999999999999999999999999


Q ss_pred             eEEEEeecccccEEEEEECCCCc
Q psy17133         86 KLVHSMVAHLDAVTSLAVDPQGL  108 (116)
Q Consensus        86 ~~~~~~~~~~~~v~~~~~~~~~~  108 (116)
                      .+++.+. ...+|....|+|..+
T Consensus        98 s~l~rir-f~spv~~~q~hp~k~  119 (405)
T KOG1273|consen   98 SPLKRIR-FDSPVWGAQWHPRKR  119 (405)
T ss_pred             CceeEEE-ccCccceeeeccccC
Confidence            9888876 567899999988544

>KOG0305|consensus

Probab=99.74  E-value=1.6e-16  Score=97.74  Aligned_cols=108  Identities=17%  Similarity=0.262  Sum_probs=95.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE--EeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT--AHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~d~~i   77 (116)
                      .|.+.|.+++|+|.....|++|+  .|+.|++||..++..+..+...       +.|..+.|++..+.+++  |..++.|
T Consensus       341 ~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-------sQVcsL~Wsk~~kEi~sthG~s~n~i  413 (484)
T KOG0305|consen  341 EHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-------SQVCSLIWSKKYKELLSTHGYSENQI  413 (484)
T ss_pred             ccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC-------CceeeEEEcCCCCEEEEecCCCCCcE
Confidence            47889999999998888999875  6999999999999988887665       58999999999766655  4457899


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .||+..+.+.+..+.+|..+|..++++|||..+++|+.|
T Consensus       414 ~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~D  452 (484)
T KOG0305|consen  414 TLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAAD  452 (484)
T ss_pred             EEEeccccceeeeecCCcceeEEEEECCCCCEEEEeccc
Confidence            999999999999999999999999999999999999876

>KOG0772|consensus

Probab=99.74  E-value=1.3e-17  Score=101.76  Aligned_cols=114  Identities=17%  Similarity=0.159  Sum_probs=86.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|...+++-+|+|.+.+.+++++.|+++++|++..- +++..++.... .+..-.++..+|+++++++|+++.||.|.+|
T Consensus       266 GHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~-~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W  344 (641)
T KOG0772|consen  266 GHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPA-GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW  344 (641)
T ss_pred             CceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccC-CCcccCceeeecCCCcchhhhcccCCceeee
Confidence            367778999999988899999999999999999753 34444443211 1113457888999999999999999999999


Q ss_pred             ECCCCeE---EEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKL---VHSMVAHLD--AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~---~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +......   ...-..|..  .|++++|+++|++|++-+.|
T Consensus       345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D  385 (641)
T KOG0772|consen  345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD  385 (641)
T ss_pred             ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCC
Confidence            9753221   222235655  89999999999999987665

>KOG0305|consensus

Probab=99.74  E-value=5.6e-17  Score=99.73  Aligned_cols=111  Identities=15%  Similarity=0.200  Sum_probs=95.5

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCc--------------------------------
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGV--------------------------------   50 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~--------------------------------   50 (116)
                      ...|+++.|++ +|..|++|..+|.|.|||....+.+..+.+ |..-.                                
T Consensus       217 ~~~vtSv~ws~-~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~  295 (484)
T KOG0305|consen  217 EELVTSVKWSP-DGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVS  295 (484)
T ss_pred             CCceEEEEECC-CCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhh
Confidence            57799999999 899999999999999999887766666665 33211                                


Q ss_pred             ---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeec
Q psy17133         51 ---SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTY  115 (116)
Q Consensus        51 ---~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~  115 (116)
                         .|...|..+.|++|+..+++++.|+.+.|||....+.+..+..|.+.|..++|+| ....||+|+.
T Consensus       296 ~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGG  364 (484)
T KOG0305|consen  296 TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGG  364 (484)
T ss_pred             hhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCC
Confidence               5778899999999999999999999999999987888888889999999999999 5678888763

>KOG0973|consensus

Probab=99.74  E-value=4.9e-17  Score=105.30  Aligned_cols=105  Identities=11%  Similarity=0.156  Sum_probs=91.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.++.|+| ++.++++++.|.+|.+|+..+.+.+..+++|      .+.|-.+.|+|-|+++++.++|+++++|+
T Consensus       127 ~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H------~s~VKGvs~DP~Gky~ASqsdDrtikvwr  199 (942)
T KOG0973|consen  127 GHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGH------QSLVKGVSWDPIGKYFASQSDDRTLKVWR  199 (942)
T ss_pred             cCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecc------cccccceEECCccCeeeeecCCceEEEEE
Confidence            3788999999999 8899999999999999999999999999999      78999999999999999999999999999


Q ss_pred             CCCCeEEEEeec------ccccEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMVA------HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +.+-...+.+..      -....+.+.|+|||.+|++.
T Consensus       200 t~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~  237 (942)
T KOG0973|consen  200 TSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP  237 (942)
T ss_pred             cccceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence            765444444432      23467899999999999874

>KOG0267|consensus

Probab=99.74  E-value=3.6e-18  Score=107.25  Aligned_cols=108  Identities=19%  Similarity=0.245  Sum_probs=99.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|++.|.++.|++ ....|++|+.+|.|++||++..+.++.+.+|      ...+.++.|+|-+.+.++++.|..+++||
T Consensus        68 ~hespIeSl~f~~-~E~LlaagsasgtiK~wDleeAk~vrtLtgh------~~~~~sv~f~P~~~~~a~gStdtd~~iwD  140 (825)
T KOG0267|consen   68 GHESPIESLTFDT-SERLLAAGSASGTIKVWDLEEAKIVRTLTGH------LLNITSVDFHPYGEFFASGSTDTDLKIWD  140 (825)
T ss_pred             ccCCcceeeecCc-chhhhcccccCCceeeeehhhhhhhhhhhcc------ccCcceeeeccceEEeccccccccceehh
Confidence            4889999999999 6678888999999999999999999999999      66899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++..-+.+.+.+|...+..+.|+|+|++++.++.|
T Consensus       141 ~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed  175 (825)
T KOG0267|consen  141 IRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGED  175 (825)
T ss_pred             hhccCceeeecCCcceeEEEeecCCCceeeccCCc
Confidence            99888888898898899999999999999998874

>KOG0277|consensus

Probab=99.74  E-value=7.8e-17  Score=91.00  Aligned_cols=106  Identities=16%  Similarity=0.235  Sum_probs=91.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~   82 (116)
                      ..+..++|++...+.+++++.||.+++||.. ..+++..++.|      ...|.++.|++. +..+++++.|++|++|+.
T Consensus        61 D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH------~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~  134 (311)
T KOG0277|consen   61 DGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEH------KREVYSVDWNTVRRRIFLTSSWDGTIKLWDP  134 (311)
T ss_pred             cceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhh------hhheEEeccccccceeEEeeccCCceEeecC
Confidence            4578899999778899999999999999964 34578888888      678999999986 567788899999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      .-...+.++.+|...|...+|+| ..+.++++|.|
T Consensus       135 ~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd  169 (311)
T KOG0277|consen  135 NRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGD  169 (311)
T ss_pred             CCCcceEeecCCccEEEEEecCCCCCCeEEEccCC
Confidence            98999999999999999999999 56788888765

>KOG0315|consensus

Probab=99.74  E-value=1.7e-16  Score=89.48  Aligned_cols=95  Identities=16%  Similarity=0.164  Sum_probs=84.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |++.+..+.++| ++++|++++.|.+++||+.++. +....++++      +.-+...+|+.|+.+|++++.|+.+++|+
T Consensus       214 h~~~il~C~lSP-d~k~lat~ssdktv~iwn~~~~~kle~~l~gh------~rWvWdc~FS~dg~YlvTassd~~~rlW~  286 (311)
T KOG0315|consen  214 HNGHILRCLLSP-DVKYLATCSSDKTVKIWNTDDFFKLELVLTGH------QRWVWDCAFSADGEYLVTASSDHTARLWD  286 (311)
T ss_pred             ccceEEEEEECC-CCcEEEeecCCceEEEEecCCceeeEEEeecC------CceEEeeeeccCccEEEecCCCCceeecc
Confidence            788999999999 8899999999999999999877 455566777      66799999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEEC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVD  104 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~  104 (116)
                      +..++.++++.+|.....+++.+
T Consensus       287 ~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  287 LSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             cccCceeeecCCcccccEEEEee
Confidence            99999999999888777776653

>KOG0310|consensus

Probab=99.72  E-value=6.4e-16  Score=93.41  Aligned_cols=106  Identities=20%  Similarity=0.196  Sum_probs=91.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~   81 (116)
                      |+.++....|+|.++..+++|++|+.+++||+.+......+.+|      +..|.+.+++|. +..+++|+-||.|++||
T Consensus       109 h~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~h------tDYVR~g~~~~~~~hivvtGsYDg~vrl~D  182 (487)
T KOG0310|consen  109 HQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGH------TDYVRCGDISPANDHIVVTGSYDGKVRLWD  182 (487)
T ss_pred             ccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCC------cceeEeeccccCCCeEEEecCCCceEEEEE
Confidence            67889999999988888899999999999999987766677888      678999999997 45889999999999999


Q ss_pred             CCCC-eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++.. ..+..+. |..+|.++.+-|.|..+++++.
T Consensus       183 tR~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgG  216 (487)
T KOG0310|consen  183 TRSLTSRVVELN-HGCPVESVLALPSGSLIASAGG  216 (487)
T ss_pred             eccCCceeEEec-CCCceeeEEEcCCCCEEEEcCC
Confidence            9876 4455554 8889999999999999998874

>KOG0308|consensus

Probab=99.72  E-value=4.5e-16  Score=97.08  Aligned_cols=107  Identities=17%  Similarity=0.223  Sum_probs=98.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +-..|++++.++ .+..+++|+..+.+++||..+++.+..+.+|      ...|..+..++||..+++++.|++|++||+
T Consensus       170 ~k~siYSLA~N~-t~t~ivsGgtek~lr~wDprt~~kimkLrGH------TdNVr~ll~~dDGt~~ls~sSDgtIrlWdL  242 (735)
T KOG0308|consen  170 PKDSIYSLAMNQ-TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGH------TDNVRVLLVNDDGTRLLSASSDGTIRLWDL  242 (735)
T ss_pred             CccceeeeecCC-cceEEEecCcccceEEeccccccceeeeecc------ccceEEEEEcCCCCeEeecCCCceEEeeec
Confidence            345789999998 7789999999999999999999999999999      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ...+++.++..|...|+++..+|+-..+++|+.|
T Consensus       243 gqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd  276 (735)
T KOG0308|consen  243 GQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRD  276 (735)
T ss_pred             cccceeeeEEeccCceEEEeeCCCcceEEecCCC
Confidence            9999999999999999999999999999998875

>KOG2394|consensus

Probab=99.72  E-value=9e-17  Score=98.45  Aligned_cols=112  Identities=23%  Similarity=0.365  Sum_probs=86.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCC--------------Cce--eEEEecCCc--C----cCCCCceeEEEEc
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLET--------------GKP--VVRIDSSQF--G----VSGGGGINRVVCH   62 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--------------~~~--~~~~~~~~~--~----~~~~~~i~~~~~~   62 (116)
                      ..++++.|.|.+...++++..++.+++||..-              +..  +.+.+.+..  .    .--.+.|+.++|+
T Consensus       220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS  299 (636)
T KOG2394|consen  220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFS  299 (636)
T ss_pred             cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeEc
Confidence            57899999996677888888999999997541              000  111111111  0    0013468889999


Q ss_pred             CCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        63 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |||++||+.+.|+.++|||..+.+++..++..-+...+++|+|||++|++|+.|
T Consensus       300 ~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGED  353 (636)
T KOG2394|consen  300 PDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGED  353 (636)
T ss_pred             CCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCc
Confidence            999999999999999999999888887777666789999999999999999987

>KOG0293|consensus

Probab=99.71  E-value=1.1e-16  Score=95.57  Aligned_cols=109  Identities=18%  Similarity=0.241  Sum_probs=92.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~   81 (116)
                      ...+|+++..+. +++++++.-.+..+++||++..+.+..+.+|..    ...+..-||.- +..++++|++|+.|+||+
T Consensus       394 e~~~its~~iS~-d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq----~~fiIrSCFgg~~~~fiaSGSED~kvyIWh  468 (519)
T KOG0293|consen  394 EEQPITSFSISK-DGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ----GHFIIRSCFGGGNDKFIASGSEDSKVYIWH  468 (519)
T ss_pred             ccCceeEEEEcC-CCcEEEEEcccCeeEEeecchhhHHHHhhcccc----cceEEEeccCCCCcceEEecCCCceEEEEE
Confidence            356788999998 788999988999999999998888888888853    33455556653 568999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCC-CcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQ-GLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d  116 (116)
                      -.+++++..+.+|...|.+++|+|. ..++|++|.|
T Consensus       469 r~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDD  504 (519)
T KOG0293|consen  469 RISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDD  504 (519)
T ss_pred             ccCCceeEeecCCcceeeEEecCCCCHHHhhccCCC
Confidence            9999999999999999999999995 5578888876

>KOG0306|consensus

Probab=99.71  E-value=1.4e-16  Score=100.68  Aligned_cols=107  Identities=20%  Similarity=0.253  Sum_probs=100.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |-=+|.++..+| +++.+++|+.|..|++|-+.-|..-+.+-+|      ...|.++.|-|+...+.+++.|+.++-||-
T Consensus       549 HkLPV~smDIS~-DSklivTgSADKnVKiWGLdFGDCHKS~fAH------dDSvm~V~F~P~~~~FFt~gKD~kvKqWDg  621 (888)
T KOG0306|consen  549 HKLPVLSMDISP-DSKLIVTGSADKNVKIWGLDFGDCHKSFFAH------DDSVMSVQFLPKTHLFFTCGKDGKVKQWDG  621 (888)
T ss_pred             cccceeEEeccC-CcCeEEeccCCCceEEeccccchhhhhhhcc------cCceeEEEEcccceeEEEecCcceEEeech
Confidence            566899999999 8899999999999999999989888888888      568999999999899999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.-+.++.+.+|...|++++.+|+|.+++++|+|
T Consensus       622 ~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD  655 (888)
T KOG0306|consen  622 EKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHD  655 (888)
T ss_pred             hhhhhheeeccchheeeeeEEcCCCCeEEeccCC
Confidence            9999999999999999999999999999999986

>KOG0288|consensus

Probab=99.71  E-value=6.7e-16  Score=91.99  Aligned_cols=112  Identities=22%  Similarity=0.302  Sum_probs=92.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +-.+.|+++..++ ++..+++++.|..+.+.|+.+.+....+......  -.+..+.+.|+|++.++++|+.||.|+||+
T Consensus       339 ~~gg~vtSl~ls~-~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k--~asDwtrvvfSpd~~YvaAGS~dgsv~iW~  415 (459)
T KOG0288|consen  339 PLGGRVTSLDLSM-DGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFK--CASDWTRVVFSPDGSYVAAGSADGSVYIWS  415 (459)
T ss_pred             ecCcceeeEeecc-CCeEEeeecCCCceeeeecccccEEEEeeccccc--cccccceeEECCCCceeeeccCCCcEEEEE
Confidence            3467899999999 8888999999999999999988777666533110  024578899999999999999999999999


Q ss_pred             CCCCeEEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.++++...+.....  .|++++|+|.|..|++++.+
T Consensus       416 v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~  452 (459)
T KOG0288|consen  416 VFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQ  452 (459)
T ss_pred             ccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCC
Confidence            999999888764433  59999999999999887653

>KOG0316|consensus

Probab=99.71  E-value=4.5e-16  Score=87.30  Aligned_cols=107  Identities=16%  Similarity=0.198  Sum_probs=86.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.-.|..++.+. +...+++++.|..+.+||+++|+.++.|.+|      .+.|+.+.|+.+...+++++.|..+++||.
T Consensus        58 hG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH------~aqVNtV~fNeesSVv~SgsfD~s~r~wDC  130 (307)
T KOG0316|consen   58 HGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGKVDRRFRGH------LAQVNTVRFNEESSVVASGSFDSSVRLWDC  130 (307)
T ss_pred             CCceeeeccccc-cccccccCCCCceEEEEEcccCeeeeecccc------cceeeEEEecCcceEEEeccccceeEEEEc
Confidence            445677888877 6688999999999999999999999999999      779999999999999999999999999998


Q ss_pred             CCCe--EE-----------------------------EEe--e-------cccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGK--LV-----------------------------HSM--V-------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~--~~-----------------------------~~~--~-------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++..  ++                             +.+  +       -...+|++++|+++++..+.++.|
T Consensus       131 RS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~  204 (307)
T KOG0316|consen  131 RSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLD  204 (307)
T ss_pred             ccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeecc
Confidence            7521  01                             111  0       123579999999999988877754

>KOG1009|consensus

Probab=99.71  E-value=1.1e-16  Score=95.03  Aligned_cols=107  Identities=17%  Similarity=0.246  Sum_probs=92.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--------C-----C---ceeEEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--------T-----G---KPVVRIDSSQFGVSGGGGINRVVCHPTLP   66 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--------~-----~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   66 (116)
                      |...|+.+.|+| +++.+++|++++.+.+|-..        +     .   .....+.+|      ...+..++|+|++.
T Consensus        64 H~~aVN~vRf~p-~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h------~~diydL~Ws~d~~  136 (434)
T KOG1009|consen   64 HTRAVNVVRFSP-DGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGH------RDDIYDLAWSPDSN  136 (434)
T ss_pred             CcceeEEEEEcC-CcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEeccc------ccchhhhhccCCCc
Confidence            788999999999 89999999999999999765        2     1   112233444      67899999999999


Q ss_pred             EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         67 LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++++.|+.+++||+..|.....+..|...++.++|.|..+++++-+.|
T Consensus       137 ~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~d  186 (434)
T KOG1009|consen  137 FLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSD  186 (434)
T ss_pred             eeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccC
Confidence            99999999999999999999999999999999999999999998876654

>KOG0310|consensus

Probab=99.71  E-value=5.4e-16  Score=93.71  Aligned_cols=107  Identities=22%  Similarity=0.289  Sum_probs=90.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|+..|.+.+|+|-++.++++|+-|+.|++||.... ..+.++..       ..+|..+.+-|.|..+++++ .+.+++|
T Consensus       151 ~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnh-------g~pVe~vl~lpsgs~iasAg-Gn~vkVW  222 (487)
T KOG0310|consen  151 GHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNH-------GCPVESVLALPSGSLIASAG-GNSVKVW  222 (487)
T ss_pred             CCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecC-------CCceeeEEEcCCCCEEEEcC-CCeEEEE
Confidence            378899999999977789999999999999999865 55666643       35799999999999999986 4589999


Q ss_pred             ECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.+|. .+..+..|...|+++++..++..|+++|.|
T Consensus       223 Dl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD  259 (487)
T KOG0310|consen  223 DLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLD  259 (487)
T ss_pred             EecCCceehhhhhcccceEEEEEeecCCceEeecccc
Confidence            998554 455555688999999999999999999876

>KOG0274|consensus

Probab=99.71  E-value=1.9e-15  Score=95.12  Aligned_cols=111  Identities=24%  Similarity=0.321  Sum_probs=97.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.+.|.++++.. .+.++++|+.|.++++||..+++....+.+|....                               
T Consensus       247 GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~  325 (537)
T KOG0274|consen  247 GHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLN  325 (537)
T ss_pred             CCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEE
Confidence            4789999999986 78999999999999999999999998888776532                               


Q ss_pred             ---CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 ---SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ---~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                         +|...|.++..+  +..+++++.|+.|++|++.++++++.+.+|...|.++.+.+. +.+++|+.|
T Consensus       326 l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D  391 (537)
T KOG0274|consen  326 LLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLD  391 (537)
T ss_pred             EeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeec
Confidence               477788888876  789999999999999999999999999999999999988776 788888876

>KOG0313|consensus

Probab=99.71  E-value=3.6e-16  Score=92.30  Aligned_cols=106  Identities=24%  Similarity=0.368  Sum_probs=92.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.++|.++.|++  ...+++++.|.+|+.||+.+++...++.+.       ..++++..+|...++++++.|..+++||
T Consensus       258 GHt~~Vs~V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~-------ksl~~i~~~~~~~Ll~~gssdr~irl~D  328 (423)
T KOG0313|consen  258 GHTEPVSSVVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTN-------KSLNCISYSPLSKLLASGSSDRHIRLWD  328 (423)
T ss_pred             ccccceeeEEEcC--CCceEeecccceEEEEEeecccceeeeecC-------cceeEeecccccceeeecCCCCceeecC
Confidence            4789999999986  488999999999999999999988888776       4689999999999999999999999999


Q ss_pred             CCCC---eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         82 NVSG---KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        82 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      .+++   ...+++.+|...|..+.|+|... +|++++.|
T Consensus       329 PR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D  367 (423)
T KOG0313|consen  329 PRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD  367 (423)
T ss_pred             CCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecC
Confidence            9864   24566889999999999999655 57788876

>KOG0639|consensus

Probab=99.70  E-value=8.9e-17  Score=98.16  Aligned_cols=103  Identities=15%  Similarity=0.141  Sum_probs=88.2

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      .++++.+| +.+.++++..||.|.|||+.....++.|++|      ...+.+|.++++|..|.+|+-|++|+.||+++++
T Consensus       512 CyALa~sp-DakvcFsccsdGnI~vwDLhnq~~VrqfqGh------tDGascIdis~dGtklWTGGlDntvRcWDlregr  584 (705)
T KOG0639|consen  512 CYALAISP-DAKVCFSCCSDGNIAVWDLHNQTLVRQFQGH------TDGASCIDISKDGTKLWTGGLDNTVRCWDLREGR  584 (705)
T ss_pred             hhhhhcCC-ccceeeeeccCCcEEEEEcccceeeecccCC------CCCceeEEecCCCceeecCCCccceeehhhhhhh
Confidence            46678899 7789999999999999999988899999999      6789999999999999999999999999998752


Q ss_pred             ----------------------------------------EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         87 ----------------------------------------LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        87 ----------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                                                              ...++..|+..|.++.|.+.|+|+++.+.|
T Consensus       585 qlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkD  654 (705)
T KOG0639|consen  585 QLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKD  654 (705)
T ss_pred             hhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCch
Confidence                                                    122233567788999999999999988775

>KOG0640|consensus

Probab=99.70  E-value=2.4e-16  Score=91.44  Aligned_cols=109  Identities=16%  Similarity=0.226  Sum_probs=91.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.++.|+| ....|++++.|+.|+++|.......+.++.-..    ...+.++.|+|.|.+++.+.+-..+++||+
T Consensus       171 H~devn~l~FHP-re~ILiS~srD~tvKlFDfsK~saKrA~K~~qd----~~~vrsiSfHPsGefllvgTdHp~~rlYdv  245 (430)
T KOG0640|consen  171 HVDEVNDLDFHP-RETILISGSRDNTVKLFDFSKTSAKRAFKVFQD----TEPVRSISFHPSGEFLLVGTDHPTLRLYDV  245 (430)
T ss_pred             ccCcccceeecc-hhheEEeccCCCeEEEEecccHHHHHHHHHhhc----cceeeeEeecCCCceEEEecCCCceeEEec
Confidence            678899999999 779999999999999999985444334433221    357999999999999999999999999999


Q ss_pred             CCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+-++...-.   +|.+.|.++.+++.+++.+|+|.|
T Consensus       246 ~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkD  282 (430)
T KOG0640|consen  246 NTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKD  282 (430)
T ss_pred             cceeEeeecCcccccccceeEEEecCCccEEEEeccC
Confidence            9888765543   678899999999999999999987

>KOG1446|consensus

Probab=99.70  E-value=2.5e-15  Score=86.72  Aligned_cols=108  Identities=16%  Similarity=0.209  Sum_probs=92.5

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ..+.+.+.|+| +|+.++.+...+.+++.|.-+|.....+..+...   .......++.||++++.+++.||+|.+|+++
T Consensus       187 ~~ew~~l~FS~-dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~---~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~  262 (311)
T KOG1446|consen  187 EAEWTDLEFSP-DGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNA---GNLPLSATFTPDSKFVLSGSDDGTIHVWNLE  262 (311)
T ss_pred             ccceeeeEEcC-CCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCC---CCcceeEEECCCCcEEEEecCCCcEEEEEcC
Confidence            45678999999 8899999999999999999999988888776431   1223678899999999999999999999999


Q ss_pred             CCeEEEEeec-ccccEEEEEECCCCcEEEeeec
Q psy17133         84 SGKLVHSMVA-HLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        84 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++..+..+.+ +.+.+.++.|+|...++++++.
T Consensus       263 tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s  295 (311)
T KOG1446|consen  263 TGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASS  295 (311)
T ss_pred             CCcEeeEecCCCCCCccccccCCceeeeeecCc
Confidence            9999998887 5778999999999999988764

>KOG0281|consensus

Probab=99.69  E-value=2.7e-17  Score=96.60  Aligned_cols=102  Identities=21%  Similarity=0.294  Sum_probs=89.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|..+.|+.   +++++++.|.++++|++.+++.+..+.+|      ...|.++.+  .++++++|+.|++|++||
T Consensus       318 GHrAaVNvVdfd~---kyIVsASgDRTikvW~~st~efvRtl~gH------kRGIAClQY--r~rlvVSGSSDntIRlwd  386 (499)
T KOG0281|consen  318 GHRAAVNVVDFDD---KYIVSASGDRTIKVWSTSTCEFVRTLNGH------KRGIACLQY--RDRLVVSGSSDNTIRLWD  386 (499)
T ss_pred             hhhhheeeecccc---ceEEEecCCceEEEEeccceeeehhhhcc------cccceehhc--cCeEEEecCCCceEEEEe
Confidence            3667788888864   69999999999999999999999999999      567777766  588999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++.|.+++.+.+|+.-|+++.|+  .+.+++|+.|
T Consensus       387 i~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYD  419 (499)
T KOG0281|consen  387 IECGACLRVLEGHEELVRCIRFD--NKRIVSGAYD  419 (499)
T ss_pred             ccccHHHHHHhchHHhhhheeec--Cceeeecccc
Confidence            99999999999999999999994  4567777765

>KOG0640|consensus

Probab=99.69  E-value=3.6e-16  Score=90.76  Aligned_cols=109  Identities=28%  Similarity=0.325  Sum_probs=92.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...|.+++|+| .|.++++|.+...+++||+++-+.-..-.   +..+|.+.|+++.+++.+++.++++.||.|++||--
T Consensus       216 ~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~Qcfvsan---Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGV  291 (430)
T KOG0640|consen  216 TEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSAN---PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGV  291 (430)
T ss_pred             cceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecC---cccccccceeEEEecCCccEEEEeccCCcEEeeccc
Confidence            45789999999 89999999999999999999876543332   223457889999999999999999999999999988


Q ss_pred             CCeEEEEee-ccc-ccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKLVHSMV-AHL-DAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~~~~~~-~~~-~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.++. .|. ..|-+..|..+++++++.+.|
T Consensus       292 S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~D  326 (430)
T KOG0640|consen  292 SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKD  326 (430)
T ss_pred             cHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCc
Confidence            888888775 343 478899999999999998876

>KOG0306|consensus

Probab=99.68  E-value=1.4e-15  Score=96.40  Aligned_cols=106  Identities=14%  Similarity=0.176  Sum_probs=98.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +..|.|+.++| ++.+|+++-.|.++++|-+.+.+.-..+.+|      .-+|.++.++||++.+++++.|..|++|-++
T Consensus       508 ~ddvL~v~~Sp-dgk~LaVsLLdnTVkVyflDtlKFflsLYGH------kLPV~smDIS~DSklivTgSADKnVKiWGLd  580 (888)
T KOG0306|consen  508 EDDVLCVSVSP-DGKLLAVSLLDNTVKVYFLDTLKFFLSLYGH------KLPVLSMDISPDSKLIVTGSADKNVKIWGLD  580 (888)
T ss_pred             cccEEEEEEcC-CCcEEEEEeccCeEEEEEecceeeeeeeccc------ccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence            46789999999 8899999999999999999998888888888      6789999999999999999999999999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      -|.+-+.+.+|...|.++.|-|+...+.++|.|
T Consensus       581 FGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD  613 (888)
T KOG0306|consen  581 FGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKD  613 (888)
T ss_pred             cchhhhhhhcccCceeEEEEcccceeEEEecCc
Confidence            999999999999999999999998899999876

>KOG1034|consensus

Probab=99.67  E-value=4e-15  Score=86.73  Aligned_cols=107  Identities=20%  Similarity=0.246  Sum_probs=91.2

Q ss_pred             CCCceEEEEccC---CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133          4 NGTPTSIDFVRD---ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF   79 (116)
Q Consensus         4 ~~~v~~~~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~   79 (116)
                      ....+.++|+-+   ...++++++.-|.|++.|+.+++....+.+|      ...|+.+.++|+. .++++++.|..|++
T Consensus        89 ~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~gh------G~sINeik~~p~~~qlvls~SkD~svRl  162 (385)
T KOG1034|consen   89 DESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGH------GGSINEIKFHPDRPQLVLSASKDHSVRL  162 (385)
T ss_pred             CcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceecc------CccchhhhcCCCCCcEEEEecCCceEEE
Confidence            344555666542   1347788888999999999999999999999      6789999999985 68999999999999


Q ss_pred             EECCCCeEEEEee---cccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++++..++..+.   +|.+.|.++.|+++|.+|++++.|
T Consensus       163 wnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmD  202 (385)
T KOG1034|consen  163 WNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMD  202 (385)
T ss_pred             EeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCc
Confidence            9999999988875   688899999999999999999876

>KOG0322|consensus

Probab=99.67  E-value=3.3e-16  Score=88.92  Aligned_cols=109  Identities=17%  Similarity=0.203  Sum_probs=89.5

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--Cc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      |.|.++|.++.|.+ ..+.=++++.+..+..|+++.  +.  ...+.+..      ...+..+.+.||+++++++++|+.
T Consensus       202 ash~qpvlsldyas-~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lk------npGv~gvrIRpD~KIlATAGWD~R  274 (323)
T KOG0322|consen  202 ASHKQPVLSLDYAS-SCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLK------NPGVSGVRIRPDGKILATAGWDHR  274 (323)
T ss_pred             hhccCcceeeeech-hhcCCcCCCccccceeeeeccccCcccccceEEec------CCCccceEEccCCcEEeecccCCc
Confidence            34778899999987 445556677788888888763  32  22333333      346899999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++|..++...+..++.|.+.+++++|+|+...+|.+|.|
T Consensus       275 iRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD  314 (323)
T KOG0322|consen  275 IRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKD  314 (323)
T ss_pred             EEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCC
Confidence            9999999999999999999999999999999999999887

>KOG1274|consensus

Probab=99.66  E-value=5.8e-15  Score=94.98  Aligned_cols=114  Identities=12%  Similarity=0.142  Sum_probs=91.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--CCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--SGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .|.++|.++.|+| ++++|++.+-||.|++|++.++.....+.+-....  .....+..++|+|++..++....|+.|++
T Consensus       136 gh~apVl~l~~~p-~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkv  214 (933)
T KOG1274|consen  136 GHDAPVLQLSYDP-KGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKV  214 (933)
T ss_pred             ccCCceeeeeEcC-CCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEE
Confidence            4789999999999 88999999999999999999887766665432211  11234678999999888888888999999


Q ss_pred             EECCCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+....+....+..  +...+..+.|+|.|+|||+++.|
T Consensus       215 y~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~  253 (933)
T KOG1274|consen  215 YSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD  253 (933)
T ss_pred             EccCCceeheeecccccccceEEEEEcCCCcEEeeeccC
Confidence            99998888777763  33458899999999999998754

>KOG2110|consensus

Probab=99.66  E-value=2.1e-14  Score=84.64  Aligned_cols=103  Identities=18%  Similarity=0.240  Sum_probs=84.8

Q ss_pred             CceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEEC
Q psy17133          6 TPTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~   82 (116)
                      .+.++++++ ++.+++.-+  ..|.|.+||..+-+++..+..|      .+.+.+++|+++|.++|++++.|+ ||++.+
T Consensus       131 gl~AlS~n~-~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH------~~~lAalafs~~G~llATASeKGTVIRVf~v  203 (391)
T KOG2110|consen  131 GLCALSPNN-ANCYLAYPGSTTSGDVVLFDTINLQPVNTINAH------KGPLAALAFSPDGTLLATASEKGTVIRVFSV  203 (391)
T ss_pred             ceEeeccCC-CCceEEecCCCCCceEEEEEcccceeeeEEEec------CCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence            355555555 445666543  4789999999999999999999      789999999999999999999886 899999


Q ss_pred             CCCeEEEEeecc--cccEEEEEECCCCcEEEeeec
Q psy17133         83 VSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        83 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+|+.+..++..  ...|.+++|+|++++|+..|.
T Consensus       204 ~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~  238 (391)
T KOG2110|consen  204 PEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSN  238 (391)
T ss_pred             CCccEeeeeeCCceeeEEEEEEECCCCCeEEEecC
Confidence            999999998733  346889999999999986653

>KOG1408|consensus

Probab=99.66  E-value=2.6e-15  Score=95.25  Aligned_cols=108  Identities=26%  Similarity=0.304  Sum_probs=98.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+++++..| ..++++++++|+.|+||+++.+++++.|++...   |.+....+...|.|.++++.+.|.++.++|..+
T Consensus       597 tTlYDm~Vdp-~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~---~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s  672 (1080)
T KOG1408|consen  597 TTLYDMAVDP-TSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRD---HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS  672 (1080)
T ss_pred             ceEEEeeeCC-CcceEEEEecccceEEEeccccceeeeeccccc---CCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence            4578899999 789999999999999999999999999998743   357788899999999999999999999999999


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++..+.+|...|+.+.|.+|.+.|++.+.|
T Consensus       673 gEcvA~m~GHsE~VTG~kF~nDCkHlISvsgD  704 (1080)
T KOG1408|consen  673 GECVAQMTGHSEAVTGVKFLNDCKHLISVSGD  704 (1080)
T ss_pred             chhhhhhcCcchheeeeeecccchhheeecCC
Confidence            99999999999999999999999999998876

>KOG0313|consensus

Probab=99.65  E-value=4.8e-15  Score=87.65  Aligned_cols=105  Identities=20%  Similarity=0.211  Sum_probs=89.7

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF   79 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~   79 (116)
                      ....++++++| ..++|++|+.+..+++||.+++.   ....+.+|      .+-|.++.|+|.. ..+++++-|+++++
T Consensus       300 ~ksl~~i~~~~-~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH------~nwVssvkwsp~~~~~~~S~S~D~t~kl  372 (423)
T KOG0313|consen  300 NKSLNCISYSP-LSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH------KNWVSSVKWSPTNEFQLVSGSYDNTVKL  372 (423)
T ss_pred             CcceeEeeccc-ccceeeecCCCCceeecCCCCCCCceeEEeeecc------hhhhhheecCCCCceEEEEEecCCeEEE
Confidence            46688999999 78999999999999999998653   45677788      6789999999975 47788999999999


Q ss_pred             EECCCCe-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++.+ ++..+.+|...|.++.|+.. ..+++|+.|
T Consensus       373 WDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD  409 (423)
T KOG0313|consen  373 WDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGAD  409 (423)
T ss_pred             EEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCc
Confidence            9999877 88999999999999999754 577788766

>KOG1446|consensus

Probab=99.65  E-value=3.8e-14  Score=81.95  Aligned_cols=106  Identities=25%  Similarity=0.373  Sum_probs=93.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~   81 (116)
                      .+.|.++.|++ +|..+++++.|..+++||..+++++..+..+      ...+..++|......+..++.  |.+|+.-+
T Consensus        14 ~~~i~sl~fs~-~G~~litss~dDsl~LYd~~~g~~~~ti~sk------kyG~~~~~Fth~~~~~i~sStk~d~tIryLs   86 (311)
T KOG1446|consen   14 NGKINSLDFSD-DGLLLITSSEDDSLRLYDSLSGKQVKTINSK------KYGVDLACFTHHSNTVIHSSTKEDDTIRYLS   86 (311)
T ss_pred             CCceeEEEecC-CCCEEEEecCCCeEEEEEcCCCceeeEeecc------cccccEEEEecCCceEEEccCCCCCceEEEE
Confidence            57899999998 8999999999999999999999999999877      456788888766555554444  88999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+.+.++.+.+|...|..++.+|-+..+++++.|
T Consensus        87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D  121 (311)
T KOG1446|consen   87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLD  121 (311)
T ss_pred             eecCceEEEcCCCCceEEEEEecCCCCeEEecccC
Confidence            99999999999999999999999999999999876

>KOG0308|consensus

Probab=99.65  E-value=6.5e-15  Score=92.08  Aligned_cols=113  Identities=17%  Similarity=0.302  Sum_probs=94.5

Q ss_pred             CCCCceEEEE-ccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCC---cCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          3 YNGTPTSIDF-VRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQ---FGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         3 ~~~~v~~~~~-~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      |...|.|+++ .+ +...+++|+-|+.|.+||++++  +.+..+..-.   ...++...+.+++.++.+..+++|+..+.
T Consensus       116 H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~  194 (735)
T KOG0308|consen  116 HKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD  194 (735)
T ss_pred             ccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence            6788999999 55 7788999999999999999977  3333332111   11134567899999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++||.++++.+-.+.+|..-|+.+..++||..++++|.|
T Consensus       195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSD  234 (735)
T KOG0308|consen  195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSD  234 (735)
T ss_pred             eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCC
Confidence            9999999999988899999999999999999999999876

>KOG0303|consensus

Probab=99.64  E-value=4.2e-15  Score=88.43  Aligned_cols=105  Identities=15%  Similarity=0.213  Sum_probs=91.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|..+|.-+.|+|.-.+.|++++.|..|.+|++.+++.+..+. |      ...|.+++|+.+|.++++.+.|..|++||
T Consensus       129 gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-h------pd~i~S~sfn~dGs~l~TtckDKkvRv~d  201 (472)
T KOG0303|consen  129 GHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-H------PDMVYSMSFNRDGSLLCTTCKDKKVRVID  201 (472)
T ss_pred             ecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-C------CCeEEEEEeccCCceeeeecccceeEEEc
Confidence            4778899999999878899999999999999999999888877 6      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccc-cEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMVAHLD-AVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~  113 (116)
                      .++++.+..-.+|.+ ......|-.++..+.||
T Consensus       202 pr~~~~v~e~~~heG~k~~Raifl~~g~i~tTG  234 (472)
T KOG0303|consen  202 PRRGTVVSEGVAHEGAKPARAIFLASGKIFTTG  234 (472)
T ss_pred             CCCCcEeeecccccCCCcceeEEeccCceeeec
Confidence            999999888766665 55677788888844443

>KOG0299|consensus

Probab=99.63  E-value=1.7e-15  Score=91.12  Aligned_cols=107  Identities=12%  Similarity=0.144  Sum_probs=94.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.+.+++.++ +++++++|+.+..+.||+..+.+.+..+++|      .+.|.+++|...-.-+++++.|+.+++|++
T Consensus       201 h~keil~~avS~-Dgkylatgg~d~~v~Iw~~~t~ehv~~~~gh------r~~V~~L~fr~gt~~lys~s~Drsvkvw~~  273 (479)
T KOG0299|consen  201 HVKEILTLAVSS-DGKYLATGGRDRHVQIWDCDTLEHVKVFKGH------RGAVSSLAFRKGTSELYSASADRSVKVWSI  273 (479)
T ss_pred             ccceeEEEEEcC-CCcEEEecCCCceEEEecCcccchhhccccc------ccceeeeeeecCccceeeeecCCceEEEeh
Confidence            678899999999 8999999999999999999999999999999      678999999988788999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +....+.++.+|...|..+.-..-.+.+..|+.|
T Consensus       274 ~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrD  307 (479)
T KOG0299|consen  274 DQLSYVETLYGHQDGVLGIDALSRERCVTVGGRD  307 (479)
T ss_pred             hHhHHHHHHhCCccceeeechhcccceEEecccc
Confidence            9888888888888888888776666666666554

>KOG0267|consensus

Probab=99.63  E-value=7.7e-16  Score=97.06  Aligned_cols=109  Identities=17%  Similarity=0.197  Sum_probs=99.6

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      +.|...+..+.|+| -+.+.+.++.+..+.+||.....+...+.+|      ...+..++|+|+|++++.+++|..+++|
T Consensus       109 tgh~~~~~sv~f~P-~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~------~~vv~~l~lsP~Gr~v~~g~ed~tvki~  181 (825)
T KOG0267|consen  109 TGHLLNITSVDFHP-YGEFFASGSTDTDLKIWDIRKKGCSHTYKSH------TRVVDVLRLSPDGRWVASGGEDNTVKIW  181 (825)
T ss_pred             hccccCcceeeecc-ceEEeccccccccceehhhhccCceeeecCC------cceeEEEeecCCCceeeccCCcceeeee
Confidence            35778889999999 7788899999999999999988889999988      6789999999999999999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |...|+....|..|...+..+.|+|..-.+++||.|
T Consensus       182 d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d  217 (825)
T KOG0267|consen  182 DLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSD  217 (825)
T ss_pred             cccccccccccccccccccccccCchhhhhccCCCC
Confidence            999999999999999999999999988888888765

>KOG0270|consensus

Probab=99.63  E-value=3.9e-15  Score=89.34  Aligned_cols=76  Identities=17%  Similarity=0.278  Sum_probs=63.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~   80 (116)
                      .|+..|.+++|+....+.|++|+.|.+|.+||+.++++...+..|      ...|.++.|+|. ...+++|+.|+++.+.
T Consensus       241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~------~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~  314 (463)
T KOG0270|consen  241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHH------GKKVQTLEWHPYEPSVLLSGSYDGTVALK  314 (463)
T ss_pred             cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhc------CCceeEEEecCCCceEEEeccccceEEee
Confidence            367778889998867789999999999999999999998888877      567888888886 4577788888888888


Q ss_pred             ECC
Q psy17133         81 DNV   83 (116)
Q Consensus        81 ~~~   83 (116)
                      |.+
T Consensus       315 D~R  317 (463)
T KOG0270|consen  315 DCR  317 (463)
T ss_pred             ecc
Confidence            776

>KOG0772|consensus

Probab=99.63  E-value=1.1e-15  Score=93.58  Aligned_cols=104  Identities=17%  Similarity=0.203  Sum_probs=80.2

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      .++.++|+| ++..|++|..||.|.+|+.....  +...+ ..|..    ...|+++.|+++|++|++-+.|+++++||+
T Consensus       319 ~~tsC~~nr-dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~----g~~Itsi~FS~dg~~LlSRg~D~tLKvWDL  393 (641)
T KOG0772|consen  319 PVTSCAWNR-DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP----GQDITSISFSYDGNYLLSRGFDDTLKVWDL  393 (641)
T ss_pred             CceeeecCC-CcchhhhcccCCceeeeecCCcccccceEeeeccCC----CCceeEEEeccccchhhhccCCCceeeeec
Confidence            468899999 88999999999999999985432  22222 34422    347999999999999999999999999999


Q ss_pred             CCCe-EEEEeec--ccccEEEEEECCCCcEEEeee
Q psy17133         83 VSGK-LVHSMVA--HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        83 ~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+ .+....+  ....-+.++|+|+.+.|++|+
T Consensus       394 rq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGt  428 (641)
T KOG0772|consen  394 RQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGT  428 (641)
T ss_pred             cccccchhhhcCCCccCCCCccccCCCceEEEecc
Confidence            8643 4444332  223457889999999999875

>KOG0299|consensus

Probab=99.62  E-value=1.6e-14  Score=87.11  Aligned_cols=114  Identities=19%  Similarity=0.163  Sum_probs=94.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEec------CCc----C-cCCCCceeEEEEcCCCCEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDS------SQF----G-VSGGGGINRVVCHPTLPLTI   69 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~------~~~----~-~~~~~~i~~~~~~~~~~~~~   69 (116)
                      .|.-++.++.++| +..+.++++.++.|.-|++.+++... .++.      |..    . ..|...+.++++++|+++++
T Consensus       140 ~H~~s~~~vals~-d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla  218 (479)
T KOG0299|consen  140 KHQLSVTSVALSP-DDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA  218 (479)
T ss_pred             cccCcceEEEeec-cccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence            4778899999999 77999999999999999998876441 1111      111    1 14466789999999999999


Q ss_pred             EEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         70 TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        70 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++.|..|.||+.++.+.++.+.+|.+.|.+++|-.....|+++|.|
T Consensus       219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D  265 (479)
T KOG0299|consen  219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD  265 (479)
T ss_pred             ecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC
Confidence            99999999999999999999999999999999998877788888765

>KOG2096|consensus

Probab=99.62  E-value=1.7e-14  Score=84.18  Aligned_cols=111  Identities=17%  Similarity=0.182  Sum_probs=81.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee------EEEec-C------------------CcC-------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV------VRIDS-S------------------QFG-------   49 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~------~~~~~-~------------------~~~-------   49 (116)
                      .|.+.|++++|+. +|+.|++++.|+.|++|++.+-...      ..++. |                  ...       
T Consensus        84 gH~~~vt~~~FsS-dGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~  162 (420)
T KOG2096|consen   84 GHKKEVTDVAFSS-DGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKL  162 (420)
T ss_pred             ccCCceeeeEEcC-CCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEe
Confidence            3778999999998 8999999999999999998742110      00000 0                  000       


Q ss_pred             ---------------------cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCc
Q psy17133         50 ---------------------VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGL  108 (116)
Q Consensus        50 ---------------------~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  108 (116)
                                           .-|.-.+..+.+.-.++++.+++.|..|.+|+++ |+.+..+......-...+.+|+|+
T Consensus       163 ~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GR  241 (420)
T KOG2096|consen  163 VKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGR  241 (420)
T ss_pred             eecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCc
Confidence                                 0223344455666678899999999999999999 999888876655667788899999


Q ss_pred             EEEeee
Q psy17133        109 YILSGT  114 (116)
Q Consensus       109 ~l~~~s  114 (116)
                      ++++++
T Consensus       242 Fia~~g  247 (420)
T KOG2096|consen  242 FIAVSG  247 (420)
T ss_pred             EEEEec
Confidence            999875

>KOG0639|consensus

Probab=99.61  E-value=6.5e-15  Score=90.22  Aligned_cols=106  Identities=16%  Similarity=0.309  Sum_probs=90.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ...+..+.+.| +++.|++|+.-..+.|||+....+..  ++...      .-....++++||.++.+++..||.|.|||
T Consensus       465 dnyiRSckL~p-dgrtLivGGeastlsiWDLAapTprikaeltss------apaCyALa~spDakvcFsccsdGnI~vwD  537 (705)
T KOG0639|consen  465 DNYIRSCKLLP-DGRTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDAKVCFSCCSDGNIAVWD  537 (705)
T ss_pred             ccceeeeEecC-CCceEEeccccceeeeeeccCCCcchhhhcCCc------chhhhhhhcCCccceeeeeccCCcEEEEE
Confidence            34678889999 88999999999999999998654432  33322      23467789999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+...++.+.+|...+.++..+++|..|-||+.|
T Consensus       538 Lhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD  572 (705)
T KOG0639|consen  538 LHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD  572 (705)
T ss_pred             cccceeeecccCCCCCceeEEecCCCceeecCCCc
Confidence            99999999999999999999999999999998865

>KOG1007|consensus

Probab=99.61  E-value=6.5e-15  Score=84.77  Aligned_cols=105  Identities=23%  Similarity=0.300  Sum_probs=82.4

Q ss_pred             CceEEEEcc-CCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133          6 TPTSIDFVR-DESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~-~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~   83 (116)
                      ..++-.|+| .+++.+++.+ ++.+..||+++.++...++..     |...+..+.|+|+.. +++++++|+.|++||.+
T Consensus       172 ~ftsg~WspHHdgnqv~tt~-d~tl~~~D~RT~~~~~sI~dA-----Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R  245 (370)
T KOG1007|consen  172 SFTSGAWSPHHDGNQVATTS-DSTLQFWDLRTMKKNNSIEDA-----HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTR  245 (370)
T ss_pred             eecccccCCCCccceEEEeC-CCcEEEEEccchhhhcchhhh-----hcceeeeccCCCCceEEEEEcCCCccEEEEecc
Confidence            345667888 4677777765 789999999988877776533     145689999999854 78999999999999997


Q ss_pred             C-CeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133         84 S-GKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ  116 (116)
Q Consensus        84 ~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d  116 (116)
                      . ...++.+.+|...+.++.|+|.. +.+++++.|
T Consensus       246 ~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD  280 (370)
T KOG1007|consen  246 KTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSD  280 (370)
T ss_pred             CCCccccccCCCceEEEEEEecCccceEEEecCCC
Confidence            4 55678888999999999999964 455677655

>KOG0269|consensus

Probab=99.60  E-value=6.2e-15  Score=93.57  Aligned_cols=104  Identities=14%  Similarity=0.248  Sum_probs=84.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ...|.++.|+|..++.++++.++|.+++||++. .+....+..|      .+.+.++.|+|++.+||+|+.|+.|+||++
T Consensus       176 SESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH------~GpV~c~nwhPnr~~lATGGRDK~vkiWd~  249 (839)
T KOG0269|consen  176 SESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAH------NGPVLCLNWHPNREWLATGGRDKMVKIWDM  249 (839)
T ss_pred             chhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcc------cCceEEEeecCCCceeeecCCCccEEEEec
Confidence            467899999998888999999999999999984 3456677788      789999999999999999999999999999


Q ss_pred             CCCeEEEEee-cccccEEEEEECCCCcE-EEee
Q psy17133         83 VSGKLVHSMV-AHLDAVTSLAVDPQGLY-ILSG  113 (116)
Q Consensus        83 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~  113 (116)
                      .+++...... .-..++.+++|-|+.++ |+++
T Consensus       250 t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtc  282 (839)
T KOG0269|consen  250 TDSRAKPKHTINTIAPVGRVKWRPARSYHLATC  282 (839)
T ss_pred             cCCCccceeEEeecceeeeeeeccCccchhhhh
Confidence            8655432222 23467899999998765 4444

>KOG0268|consensus

Probab=99.60  E-value=3.7e-15  Score=87.86  Aligned_cols=105  Identities=20%  Similarity=0.356  Sum_probs=89.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++.|+|.+...|+++..|+.+.+||+.+++++..+...       ...+.++|+|..--+.++++|..+..+|++.
T Consensus       188 Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~-------mRTN~IswnPeafnF~~a~ED~nlY~~DmR~  260 (433)
T KOG0268|consen  188 DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT-------MRTNTICWNPEAFNFVAANEDHNLYTYDMRN  260 (433)
T ss_pred             CceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee-------ccccceecCccccceeeccccccceehhhhh
Confidence            457889999977778888889999999999999988877544       3578999999777888899999999999975


Q ss_pred             C-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         85 G-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        85 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      - +.+....+|...|.++.|+|.|+-+++||.|
T Consensus       261 l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyD  293 (433)
T KOG0268|consen  261 LSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYD  293 (433)
T ss_pred             hcccchhhcccceeEEEeccCCCcchhcccccc
Confidence            4 4566677888999999999999999999987

>KOG1063|consensus

Probab=99.59  E-value=2.1e-14  Score=90.29  Aligned_cols=107  Identities=10%  Similarity=0.161  Sum_probs=90.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      |.-.|++++.+| ++++++++..     ...|++|+..+..++..++.|      +-.|+.+.|+||+++|++.+.|+++
T Consensus       524 HGyEv~~l~~s~-~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~H------sLTVT~l~FSpdg~~LLsvsRDRt~  596 (764)
T KOG1063|consen  524 HGYEVYALAISP-TGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGH------SLTVTRLAFSPDGRYLLSVSRDRTV  596 (764)
T ss_pred             CceeEEEEEecC-CCCEEeehhhhCCccceEEEEEeccchhhhheeccc------ceEEEEEEECCCCcEEEEeecCceE
Confidence            555789999999 8899999864     345899999988888889999      6789999999999999999999999


Q ss_pred             EEEECCCCeE----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         78 RFFDNVSGKL----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+|.......    ....+.|..-|.+..|+|++.+|+|+|+|
T Consensus       597 sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRD  639 (764)
T KOG1063|consen  597 SLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRD  639 (764)
T ss_pred             EeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCC
Confidence            9998754322    12255788889999999999999999987

>KOG1009|consensus

Probab=99.58  E-value=4e-14  Score=84.38  Aligned_cols=113  Identities=17%  Similarity=0.248  Sum_probs=84.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE---EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV---RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      ..++..+.|.++..+++++++.|..|++|-++.+..-.   .++-+..-..|...++.+.|+|+|.+++++++++.+.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            45788999998555599999999999999876432211   111111112337789999999999999999999999999


Q ss_pred             ECC--------C-----C---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNV--------S-----G---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~--------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      -..        +     .   .....+.+|...+..++|+|+++++++++.|
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d  144 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD  144 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence            754        2     1   1234456788899999999999999998865

>KOG0646|consensus

Probab=99.58  E-value=3.4e-14  Score=85.80  Aligned_cols=106  Identities=13%  Similarity=0.116  Sum_probs=91.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .|.+.++.-+| .|.+++.|...+.+++|.+.+|..+..+..|+      ..|+++.|+-|++.+++++.||.|.+|.+.
T Consensus        81 Pg~v~al~s~n-~G~~l~ag~i~g~lYlWelssG~LL~v~~aHY------Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~  153 (476)
T KOG0646|consen   81 PGPVHALASSN-LGYFLLAGTISGNLYLWELSSGILLNVLSAHY------QSITCLKFSDDGSHIITGSKDGAVLVWLLT  153 (476)
T ss_pred             ccceeeeecCC-CceEEEeecccCcEEEEEeccccHHHHHHhhc------cceeEEEEeCCCcEEEecCCCccEEEEEEE
Confidence            57889999999 88999998899999999999999999998885      379999999999999999999999999753


Q ss_pred             ---------CCeEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         84 ---------SGKLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        84 ---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                               +-+.++.+..|.-.|+++...+-  ...++|+|.|
T Consensus       154 ~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D  197 (476)
T KOG0646|consen  154 DLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASED  197 (476)
T ss_pred             eecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCC
Confidence                     34567888889999999987654  4578888876

>KOG2055|consensus

Probab=99.57  E-value=2.6e-14  Score=86.39  Aligned_cols=108  Identities=13%  Similarity=0.138  Sum_probs=87.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ..+|.|..+.|+. ++..|++++.+|.|.+||+.....+..+.....     -.-+.++.++++.++|+|+..|.|.|||
T Consensus       342 KieG~v~~~~fsS-dsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~-----v~gts~~~S~ng~ylA~GS~~GiVNIYd  415 (514)
T KOG2055|consen  342 KIEGVVSDFTFSS-DSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS-----VHGTSLCISLNGSYLATGSDSGIVNIYD  415 (514)
T ss_pred             eeccEEeeEEEec-CCcEEEEEcCCceEEEEecCCcceEEEEeecCc-----cceeeeeecCCCceEEeccCcceEEEec
Confidence            4568899999997 778888888899999999999988888876521     2346788889999999999999999999


Q ss_pred             CCC------CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NVS------GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+      .+++..+..-...|+++.|+++.++|+.+|.
T Consensus       416 ~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~  455 (514)
T KOG2055|consen  416 GNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASR  455 (514)
T ss_pred             cchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhh
Confidence            653      3444545445568999999999999987763

>KOG0771|consensus

Probab=99.57  E-value=1e-13  Score=82.68  Aligned_cols=112  Identities=18%  Similarity=0.221  Sum_probs=87.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC--------------C--c------------Cc---
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS--------------Q--F------------GV---   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--------------~--~------------~~---   50 (116)
                      .|.+.|.++.|+| ++++|++-+.+ ..++|+.+++..+......              .  .            ..   
T Consensus       184 ~~~~eV~DL~FS~-dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~  261 (398)
T KOG0771|consen  184 AHHAEVKDLDFSP-DGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC  261 (398)
T ss_pred             hhcCccccceeCC-CCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence            3678999999999 88999999988 9999999887332222100              0  0            00   


Q ss_pred             -----------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECCCCcEEEe
Q psy17133         51 -----------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        51 -----------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~  112 (116)
                                       .....+.+++++++|++++.++.||.|.+++..+.+.++..+ .|...|+.+.|+|+.+++++
T Consensus       262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~s  341 (398)
T KOG0771|consen  262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLAS  341 (398)
T ss_pred             EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccc
Confidence                             123368899999999999999999999999998887776654 68889999999999998887


Q ss_pred             eec
Q psy17133        113 GTY  115 (116)
Q Consensus       113 ~s~  115 (116)
                      .+.
T Consensus       342 vSs  344 (398)
T KOG0771|consen  342 VSS  344 (398)
T ss_pred             ccc
Confidence            554

>KOG1445|consensus

Probab=99.57  E-value=1.4e-14  Score=91.13  Aligned_cols=109  Identities=17%  Similarity=0.114  Sum_probs=90.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|+.+.|+|--.+.|++++.|.+|++||+.+++....+.+|      ...|.+++|+|+|+.+++.+.|+++++|+
T Consensus       675 ~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gH------tdqIf~~AWSpdGr~~AtVcKDg~~rVy~  748 (1012)
T KOG1445|consen  675 IHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGH------TDQIFGIAWSPDGRRIATVCKDGTLRVYE  748 (1012)
T ss_pred             cccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccC------cCceeEEEECCCCcceeeeecCceEEEeC
Confidence            367889999999977789999999999999999999988899999      78999999999999999999999999999


Q ss_pred             CCCCeE-EEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKL-VHSMVAH-LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+.++. ++.-.+. ..+--.+.|.-+|++++..+.|
T Consensus       749 Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfd  785 (1012)
T KOG1445|consen  749 PRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFD  785 (1012)
T ss_pred             CCCCCCccccCCCCccCcceeEEEEecCcEEEEeccc
Confidence            887654 2222221 2234567788899988876654

>KOG0300|consensus

Probab=99.57  E-value=3.6e-14  Score=82.99  Aligned_cols=106  Identities=25%  Similarity=0.366  Sum_probs=92.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+..|.. +++.+++++-|..-.+||++++..+..+.+|      ....+-.+-+|..+++++.+.|.+.++||+
T Consensus       271 H~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGH------d~ELtHcstHptQrLVvTsSrDtTFRLWDF  343 (481)
T KOG0300|consen  271 HRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGH------DSELTHCSTHPTQRLVVTSSRDTTFRLWDF  343 (481)
T ss_pred             cccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCc------chhccccccCCcceEEEEeccCceeEeccc
Confidence            677888999988 8999999999999999999999999999999      567888888999999999999999999999


Q ss_pred             CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.. ..+..+.+|...|++..|..+.+. ++++.|
T Consensus       344 ReaI~sV~VFQGHtdtVTS~vF~~dd~v-VSgSDD  377 (481)
T KOG0300|consen  344 REAIQSVAVFQGHTDTVTSVVFNTDDRV-VSGSDD  377 (481)
T ss_pred             hhhcceeeeecccccceeEEEEecCCce-eecCCC
Confidence            743 446678899999999999887654 466654

>KOG0278|consensus

Probab=99.56  E-value=1.2e-14  Score=82.27  Aligned_cols=102  Identities=25%  Similarity=0.371  Sum_probs=87.5

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ---|.+++|+. +.+.|++|+.+.-+++||++.. .+..++.+|      ++.|..+-|....+.+++...|+.|++||.
T Consensus       100 khivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~gh------tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~  172 (334)
T KOG0278|consen  100 KHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGH------TGGIRTVLWCHEDKCILSSADDKTVRLWDH  172 (334)
T ss_pred             hheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCC------CCcceeEEEeccCceEEeeccCCceEEEEe
Confidence            34578899998 8899999999999999999754 356777888      788999999988888888899999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +++..++.+. ....|+++..+++|++|.++
T Consensus       173 rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia  202 (334)
T KOG0278|consen  173 RTGTEVQSLE-FNSPVTSLEVSQDGRILTIA  202 (334)
T ss_pred             ccCcEEEEEe-cCCCCcceeeccCCCEEEEe
Confidence            9999998887 45678999999999988653

>KOG4283|consensus

Probab=99.56  E-value=1.5e-13  Score=79.57  Aligned_cols=105  Identities=17%  Similarity=0.245  Sum_probs=89.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~~i~~~~   81 (116)
                      -.|..+.|.|-+..++.+++-|..+++||.++-+....|+-.       +.|.+-+++|-   ..+++++..+-.|++.|
T Consensus       102 y~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~me-------~~VYshamSp~a~sHcLiA~gtr~~~VrLCD  174 (397)
T KOG4283|consen  102 YAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFKME-------GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCD  174 (397)
T ss_pred             eeeeeeEEeeecCceeecccccceEEEeecccceeeEEeecC-------ceeehhhcChhhhcceEEEEecCCCcEEEEe
Confidence            457888999977778888889999999999998887777654       46777788874   34788888899999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEE-EeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYI-LSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~d  116 (116)
                      +++|...+.+.+|.+.|.++.|+|...++ ++|+.|
T Consensus       175 i~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaD  210 (397)
T KOG4283|consen  175 IASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSAD  210 (397)
T ss_pred             ccCCcceeeeccccCceEEEEeccCceeEEEecCCC
Confidence            99999999999999999999999988864 677765

>KOG0647|consensus

Probab=99.56  E-value=3e-13  Score=78.29  Aligned_cols=83  Identities=17%  Similarity=0.310  Sum_probs=71.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC--CEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL--PLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~d~~i~~   79 (116)
                      -|.++|.++.|+. ++..+++++.|+++++||+.++ ++..+..|      ...|..+.|-+..  ..|++|+.|++|+.
T Consensus        70 ~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~H------d~pvkt~~wv~~~~~~cl~TGSWDKTlKf  141 (347)
T KOG0647|consen   70 SHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG-QVSQVAAH------DAPVKTCHWVPGMNYQCLVTGSWDKTLKF  141 (347)
T ss_pred             ccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC-Ceeeeeec------ccceeEEEEecCCCcceeEecccccceee
Confidence            3789999999997 8899999999999999999988 46677777      6789999888754  48999999999999


Q ss_pred             EECCCCeEEEEee
Q psy17133         80 FDNVSGKLVHSMV   92 (116)
Q Consensus        80 ~~~~~~~~~~~~~   92 (116)
                      ||.+....+.++.
T Consensus       142 WD~R~~~pv~t~~  154 (347)
T KOG0647|consen  142 WDTRSSNPVATLQ  154 (347)
T ss_pred             cccCCCCeeeeee
Confidence            9999887776665

>KOG1539|consensus

Probab=99.56  E-value=1.5e-13  Score=88.11  Aligned_cols=105  Identities=16%  Similarity=0.289  Sum_probs=90.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe---cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID---SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ..+++++.++ .|++.+.|...|.|-+|++.+|-....|.   .|      .+.|++++....++.+++++.+|-+++||
T Consensus       449 ~~~~av~vs~-CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah------~~~V~gla~D~~n~~~vsa~~~Gilkfw~  521 (910)
T KOG1539|consen  449 INATAVCVSF-CGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAH------KGEVTGLAVDGTNRLLVSAGADGILKFWD  521 (910)
T ss_pred             cceEEEEEec-cCceEEEeccCCeEEEEEcccCeeecccccCccc------cCceeEEEecCCCceEEEccCcceEEEEe
Confidence            5678888898 89999999999999999999998888883   44      67899999999999999999999999999


Q ss_pred             CCCC-----------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSG-----------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~-----------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..++                                         +..+.+.+|...+++++|||||+||++++.|
T Consensus       522 f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD  597 (910)
T KOG1539|consen  522 FKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMD  597 (910)
T ss_pred             cCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecC
Confidence            8753                                         2334455788999999999999999999876

>KOG2048|consensus

Probab=99.55  E-value=1.5e-13  Score=86.31  Aligned_cols=113  Identities=17%  Similarity=0.172  Sum_probs=90.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcC--CCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS--GGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .+.+++.+++|+| ++..++.|+.|+.|++||..+++.+....-......  ...-+.++.+-. ...+++|...|+|.+
T Consensus       152 rq~sRvLslsw~~-~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~F  229 (691)
T KOG2048|consen  152 RQKSRVLSLSWNP-TGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTF  229 (691)
T ss_pred             cccceEEEEEecC-CccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEE
Confidence            4568999999999 778899999999999999998887663322211111  123356666553 457899999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||...+.+++....|.+.|.+++-++++.++++++.|
T Consensus       230 Wd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd  266 (691)
T KOG2048|consen  230 WDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVD  266 (691)
T ss_pred             EcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCC
Confidence            9999999999999999999999999999999888765

>KOG0646|consensus

Probab=99.55  E-value=6.4e-13  Score=80.45  Aligned_cols=107  Identities=20%  Similarity=0.283  Sum_probs=88.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC---------CceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET---------GKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTIT   70 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~   70 (116)
                      .|...|+++.|+- ++.++++++.|+.|.+|++.+         -+++..|..|      .-.|+++.+.+-  ...+++
T Consensus       121 aHYQ~ITcL~fs~-dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~H------tlsITDl~ig~Gg~~~rl~T  193 (476)
T KOG0646|consen  121 AHYQSITCLKFSD-DGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDH------TLSITDLQIGSGGTNARLYT  193 (476)
T ss_pred             hhccceeEEEEeC-CCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccC------cceeEEEEecCCCccceEEE
Confidence            4778999999997 889999999999999998642         2345566666      678999888765  458999


Q ss_pred             EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++.|.++++||+..+.++..+. ....+.+++.+|-.+.++.|+.|
T Consensus       194 aS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~  238 (476)
T KOG0646|consen  194 ASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEE  238 (476)
T ss_pred             ecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCc
Confidence            9999999999999999888776 45578999999998888887654

>KOG1036|consensus

Probab=99.55  E-value=3.9e-13  Score=77.80  Aligned_cols=104  Identities=13%  Similarity=0.180  Sum_probs=86.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ....|..+.|+| .++.|++++-|+.+++|+.........++..       .++.+.+|.+ ...+++++-|+.|+.+|+
T Consensus        12 P~d~IS~v~f~~-~~~~LLvssWDgslrlYdv~~~~l~~~~~~~-------~plL~c~F~d-~~~~~~G~~dg~vr~~Dl   82 (323)
T KOG1036|consen   12 PEDGISSVKFSP-SSSDLLVSSWDGSLRLYDVPANSLKLKFKHG-------APLLDCAFAD-ESTIVTGGLDGQVRRYDL   82 (323)
T ss_pred             ChhceeeEEEcC-cCCcEEEEeccCcEEEEeccchhhhhheecC-------CceeeeeccC-CceEEEeccCceEEEEEe
Confidence            356789999998 7788888889999999999877655555543       5788888877 567899999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++...... .|...++++.+++....+++||+|
T Consensus        83 n~~~~~~ig-th~~~i~ci~~~~~~~~vIsgsWD  115 (323)
T KOG1036|consen   83 NTGNEDQIG-THDEGIRCIEYSYEVGCVISGSWD  115 (323)
T ss_pred             cCCcceeec-cCCCceEEEEeeccCCeEEEcccC
Confidence            988776544 488899999999988899999987

>KOG1273|consensus

Probab=99.54  E-value=8.2e-13  Score=77.12  Aligned_cols=113  Identities=19%  Similarity=0.207  Sum_probs=88.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------------------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------------------------   50 (116)
                      |..+|++++|++ +|.+|++++.|-.+.+||+..|.++..+.-..+.-                                
T Consensus        64 H~~pi~sl~WS~-dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~  142 (405)
T KOG1273|consen   64 HVRPITSLCWSR-DGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS  142 (405)
T ss_pred             cccceeEEEecC-CCCEeeeecCCceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee
Confidence            778999999999 89999999999999999999887766554332210                                


Q ss_pred             --------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc-ccEEEEEECCCCcEEEeeecC
Q psy17133         51 --------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL-DAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 --------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~d  116 (116)
                              ..........|++.|+++++|...|.+.+++.++-+++..++... ..|..+.++..|+.|+..+.|
T Consensus       143 ~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsD  217 (405)
T KOG1273|consen  143 VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSD  217 (405)
T ss_pred             eccCCCccccccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCC
Confidence                    000011123367789999999999999999999999888877544 678899999999999887655

>KOG1538|consensus

Probab=99.54  E-value=6.9e-14  Score=88.52  Aligned_cols=101  Identities=14%  Similarity=0.213  Sum_probs=82.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|..++|-| +|..++.+. +..+.+||.++|..+..+++|      ...|.+++|+.+|+.+++|+.|..+.+|..+-
T Consensus        13 hci~d~afkP-DGsqL~lAA-g~rlliyD~ndG~llqtLKgH------KDtVycVAys~dGkrFASG~aDK~VI~W~~kl   84 (1081)
T KOG1538|consen   13 HCINDIAFKP-DGTQLILAA-GSRLLVYDTSDGTLLQPLKGH------KDTVYCVAYAKDGKRFASGSADKSVIIWTSKL   84 (1081)
T ss_pred             cchheeEECC-CCceEEEec-CCEEEEEeCCCcccccccccc------cceEEEEEEccCCceeccCCCceeEEEecccc
Confidence            4688999999 666666655 458999999999999999999      66899999999999999999999999999652


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      --.+ .+ .|...|.+|.|+|-...|++++.
T Consensus        85 EG~L-kY-SH~D~IQCMsFNP~~h~LasCsL  113 (1081)
T KOG1538|consen   85 EGIL-KY-SHNDAIQCMSFNPITHQLASCSL  113 (1081)
T ss_pred             ccee-ee-ccCCeeeEeecCchHHHhhhcch
Confidence            2121 22 37778889999988888877653

>KOG1034|consensus

Probab=99.54  E-value=8.1e-14  Score=81.40  Aligned_cols=81  Identities=12%  Similarity=0.105  Sum_probs=71.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|..+.+.|.+.+++++++.|..|++|++.+...+..|-+..   +|...|.+++|++++..+++++.|..+++|+
T Consensus       133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~e---gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~  209 (385)
T KOG1034|consen  133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVE---GHRDEVLSVDFSLDGDRIASCGMDHSLKLWR  209 (385)
T ss_pred             ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccc---cccCcEEEEEEcCCCCeeeccCCcceEEEEe
Confidence            4778899999999888899999999999999999999888875432   2478899999999999999999999999999


Q ss_pred             CCCC
Q psy17133         82 NVSG   85 (116)
Q Consensus        82 ~~~~   85 (116)
                      +...
T Consensus       210 l~~~  213 (385)
T KOG1034|consen  210 LNVK  213 (385)
T ss_pred             cChh
Confidence            9844

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.54  E-value=2.8e-12  Score=75.66  Aligned_cols=102  Identities=21%  Similarity=0.295  Sum_probs=77.8

Q ss_pred             CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~~i~~~~~   82 (116)
                      ..+..+.|+| ++..+ +++..++.+++||..+++.+..+..+       ..+..++++|+++.++++ ..++.+++||+
T Consensus        31 ~~~~~l~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~  102 (300)
T TIGR03866        31 QRPRGITLSK-DGKLLYVCASDSDTIQVIDLATGEVIGTLPSG-------PDPELFALHPNGKILYIANEDDNLVTVIDI  102 (300)
T ss_pred             CCCCceEECC-CCCEEEEEECCCCeEEEEECCCCcEEEeccCC-------CCccEEEECCCCCEEEEEcCCCCeEEEEEC
Confidence            3467899999 66655 56677899999999988877766544       235678899999877554 56899999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++++.+..+.. ...+..++|+|+++++++++.
T Consensus       103 ~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~  134 (300)
T TIGR03866       103 ETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSE  134 (300)
T ss_pred             CCCeEEeEeeC-CCCcceEEECCCCCEEEEEec
Confidence            98877766652 234678999999999987654

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0649|consensus

Probab=99.54  E-value=5.8e-13  Score=75.40  Aligned_cols=81  Identities=16%  Similarity=0.157  Sum_probs=68.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++...|.+ +-++.++.|+.++-||+++|+...++++|      +..+.++.-......+.+|++||++++||.++
T Consensus       115 PeINam~ldP~e-nSi~~AgGD~~~y~~dlE~G~i~r~~rGH------tDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt  187 (325)
T KOG0649|consen  115 PEINAMWLDPSE-NSILFAGGDGVIYQVDLEDGRIQREYRGH------TDYVHSVVGRNANGQILSGAEDGTVRVWDTKT  187 (325)
T ss_pred             CccceeEeccCC-CcEEEecCCeEEEEEEecCCEEEEEEcCC------cceeeeeeecccCcceeecCCCccEEEEeccc
Confidence            457888899944 55555557999999999999999999999      67899988766667899999999999999999


Q ss_pred             CeEEEEee
Q psy17133         85 GKLVHSMV   92 (116)
Q Consensus        85 ~~~~~~~~   92 (116)
                      ++.++.+.
T Consensus       188 ~k~v~~ie  195 (325)
T KOG0649|consen  188 QKHVSMIE  195 (325)
T ss_pred             cceeEEec
Confidence            99888765

>KOG0302|consensus

Probab=99.54  E-value=2.8e-13  Score=80.39  Aligned_cols=106  Identities=18%  Similarity=0.265  Sum_probs=80.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      |.+-|..++|+. .-.+|++|+++|.++|||++   .++++..|+.|      ..+|+++.|+|. ...+++++.|..|.
T Consensus       301 h~sDVNVISWnr-~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~H------k~pItsieW~p~e~s~iaasg~D~Qit  373 (440)
T KOG0302|consen  301 HNSDVNVISWNR-REPLLASGGDDGTLSIWDLRQFKSGQPVATFKYH------KAPITSIEWHPHEDSVIAASGEDNQIT  373 (440)
T ss_pred             cCCceeeEEccC-CcceeeecCCCceEEEEEhhhccCCCcceeEEec------cCCeeEEEeccccCceEEeccCCCcEE
Confidence            677899999998 55599999999999999997   36788999999      679999999997 46888889999999


Q ss_pred             EEECCCCe----------------EEEEeecc--cccEEEEEECCCCc-EEEeeec
Q psy17133         79 FFDNVSGK----------------LVHSMVAH--LDAVTSLAVDPQGL-YILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~----------------~~~~~~~~--~~~v~~~~~~~~~~-~l~~~s~  115 (116)
                      +||+..-.                ..+.+..|  ...+..+.|+++-. ++++.+.
T Consensus       374 iWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~  429 (440)
T KOG0302|consen  374 IWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAI  429 (440)
T ss_pred             EEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecc
Confidence            99975210                01122223  33677888988644 5555443

>KOG1332|consensus

Probab=99.53  E-value=1.6e-13  Score=77.44  Aligned_cols=109  Identities=17%  Similarity=0.189  Sum_probs=85.7

Q ss_pred             CCCCCceEEEE-ccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDF-VRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~-~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~   76 (116)
                      .|.|+|..++| +|.-|.+|++++-|++|.||.-..++-  ..+...|      ...+++++|.|.  |..|++++.||.
T Consensus        54 Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h------~~SVNsV~wapheygl~LacasSDG~  127 (299)
T KOG1332|consen   54 GHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAH------SASVNSVAWAPHEYGLLLACASSDGK  127 (299)
T ss_pred             CCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhh------cccceeecccccccceEEEEeeCCCc
Confidence            48899999999 566789999999999999999886643  3344555      678999999997  558899999999


Q ss_pred             EEEEECCCC-e--EEEEeecccccEEEEEECCC---C-----------cEEEeeecC
Q psy17133         77 IRFFDNVSG-K--LVHSMVAHLDAVTSLAVDPQ---G-----------LYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~-~--~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~s~d  116 (116)
                      |.+.+.+.. .  ..+....|.-.+++++|.|-   |           +.|++|+.|
T Consensus       128 vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcD  184 (299)
T KOG1332|consen  128 VSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCD  184 (299)
T ss_pred             EEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCc
Confidence            999988643 2  22334568889999999986   4           457777765

>KOG1007|consensus

Probab=99.53  E-value=2.6e-13  Score=78.31  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=84.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~   80 (116)
                      |...|.++.|+|+....|+++++|+.|++||.+ +..++.++.+|      ..-+.+++|+|. ..++.+++.|..|.+|
T Consensus       213 Hgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~H------sHWvW~VRfn~~hdqLiLs~~SDs~V~Ls  286 (370)
T KOG1007|consen  213 HGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGH------SHWVWAVRFNPEHDQLILSGGSDSAVNLS  286 (370)
T ss_pred             hcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCC------ceEEEEEEecCccceEEEecCCCceeEEE
Confidence            456689999999544577889999999999997 45678888888      677999999996 6788999999999999


Q ss_pred             ECCCC-----------------------------eEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         81 DNVSG-----------------------------KLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        81 ~~~~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ....-                             ..+..+..|...|++++|+.-.. +|++-|.|
T Consensus       287 ca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD  352 (370)
T KOG1007|consen  287 CASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD  352 (370)
T ss_pred             eccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccC
Confidence            64321                             12334567888999999987544 45666654

>KOG2919|consensus

Probab=99.53  E-value=8.5e-14  Score=81.33  Aligned_cols=109  Identities=14%  Similarity=0.196  Sum_probs=88.7

Q ss_pred             CCCCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |.+.|+.+.|.+ +|+.+.+|. .+.+|..||++. +.++..+..|...   ++.-..+...|++++|++|+.||.|++|
T Consensus       249 h~gGvThL~~~e-dGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~---TNQRI~FDld~~~~~LasG~tdG~V~vw  324 (406)
T KOG2919|consen  249 HGGGVTHLQWCE-DGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGD---TNQRILFDLDPKGEILASGDTDGSVRVW  324 (406)
T ss_pred             cCCCeeeEEecc-CcCeecccccCCCeEEEEeehhccchhhhhhhhccC---ccceEEEecCCCCceeeccCCCccEEEE
Confidence            678899999999 889999887 478899999974 4566666665321   3445566778999999999999999999


Q ss_pred             ECCC-CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         81 DNVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++. +.....+..+...+..++++|--.++++++.
T Consensus       325 dlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssG  360 (406)
T KOG2919|consen  325 DLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSG  360 (406)
T ss_pred             ecCCCCCcccccccccccccceecCcccceeeeccC
Confidence            9987 7767777778889999999999888888763

>KOG1310|consensus

Probab=99.53  E-value=1.1e-13  Score=85.77  Aligned_cols=108  Identities=19%  Similarity=0.252  Sum_probs=90.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i~   78 (116)
                      .|+|.|.++.|+. +|.+|++|++|-.+.|||....+++..+. +|      ...|.++.|-|.  .++++++..|..|+
T Consensus        48 GH~GCVN~LeWn~-dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgH------taNIFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   48 GHTGCVNCLEWNA-DGELLASGSDDTRLIVWDPFEYKLLHSISTGH------TANIFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             cccceecceeecC-CCCEEeecCCcceEEeecchhcceeeeeeccc------ccceeEEeeeccCCCeEEEeccCcceEE
Confidence            4889999999998 89999999999999999999888888774 55      678999999984  57999999999999


Q ss_pred             EEECCC----------CeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133         79 FFDNVS----------GKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d  116 (116)
                      ++|+..          .+..+.+..|...|..++-.|++ ..+-+++.|
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasED  169 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASED  169 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCC
Confidence            999874          12344456788889999999988 566677765

>KOG0301|consensus

Probab=99.53  E-value=2.7e-13  Score=85.45  Aligned_cols=103  Identities=16%  Similarity=0.170  Sum_probs=90.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|+..|.++..-| + +.+++|+.|..|++|.-  ++.+.+|.+|      ...|..+++-++. .+++++.||.|++|+
T Consensus       138 gH~asVWAv~~l~-e-~~~vTgsaDKtIklWk~--~~~l~tf~gH------tD~VRgL~vl~~~-~flScsNDg~Ir~w~  206 (745)
T KOG0301|consen  138 GHTASVWAVASLP-E-NTYVTGSADKTIKLWKG--GTLLKTFSGH------TDCVRGLAVLDDS-HFLSCSNDGSIRLWD  206 (745)
T ss_pred             CcchheeeeeecC-C-CcEEeccCcceeeeccC--Cchhhhhccc------hhheeeeEEecCC-CeEeecCCceEEEEe
Confidence            4888999999988 4 48999999999999985  7788999999      6789999988765 577888999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      + +|+.+..+.+|...+.+++...++..+++++.|
T Consensus       207 ~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gED  240 (745)
T KOG0301|consen  207 L-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGED  240 (745)
T ss_pred             c-cCceeeeeeccceEEEEEEecCCCCeEEEecCC
Confidence            8 699999999999999999988888899998876

>KOG0641|consensus

Probab=99.53  E-value=9.2e-13  Score=74.07  Aligned_cols=105  Identities=19%  Similarity=0.340  Sum_probs=89.8

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .+.|.+++..| .+.+|++|..|....+||+..++.+..+..|      ...|.++.|+|.-.++.+++-|..|++-|++
T Consensus       231 ssavaav~vdp-sgrll~sg~~dssc~lydirg~r~iq~f~ph------sadir~vrfsp~a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  231 SSAVAAVAVDP-SGRLLASGHADSSCMLYDIRGGRMIQRFHPH------SADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             cceeEEEEECC-CcceeeeccCCCceEEEEeeCCceeeeeCCC------ccceeEEEeCCCceEEEEecccceEEEeecc
Confidence            46788999999 8899999999999999999999999999998      7789999999999999999999999999987


Q ss_pred             CCeE-----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKL-----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                       |.+     +.....|...+..+.|+|+.--+++.+.|
T Consensus       304 -gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssad  340 (350)
T KOG0641|consen  304 -GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSAD  340 (350)
T ss_pred             -cchhhcCceEEEEeccCceEEEEecCccceeeeccCc
Confidence             322     22334678888889999987777776654

>KOG0290|consensus

Probab=99.52  E-value=6.1e-13  Score=76.85  Aligned_cols=108  Identities=19%  Similarity=0.248  Sum_probs=85.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~   78 (116)
                      +..+++++.|+.-+.+++.+++-|-+..|||++++..   ...+..|      ...|..++|...+. .+++.+.||.++
T Consensus       149 ~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAH------DKEV~DIaf~~~s~~~FASvgaDGSvR  222 (364)
T KOG0290|consen  149 FCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAH------DKEVYDIAFLKGSRDVFASVGADGSVR  222 (364)
T ss_pred             cCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEec------CcceeEEEeccCccceEEEecCCCcEE
Confidence            4567899999877889999999999999999998633   3445566      57899999998654 788999999999


Q ss_pred             EEECCCC------------------------------------------------eEEEEeecccccEEEEEECCC-CcE
Q psy17133         79 FFDNVSG------------------------------------------------KLVHSMVAHLDAVTSLAVDPQ-GLY  109 (116)
Q Consensus        79 ~~~~~~~------------------------------------------------~~~~~~~~~~~~v~~~~~~~~-~~~  109 (116)
                      +||++..                                                ..+..+..|.+.|..++|.|. ...
T Consensus       223 mFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~h  302 (364)
T KOG0290|consen  223 MFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSH  302 (364)
T ss_pred             EEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCce
Confidence            9998752                                                123345578888999999985 457


Q ss_pred             EEeeecC
Q psy17133        110 ILSGTYQ  116 (116)
Q Consensus       110 l~~~s~d  116 (116)
                      |+|++.|
T Consensus       303 ictaGDD  309 (364)
T KOG0290|consen  303 ICTAGDD  309 (364)
T ss_pred             eeecCCc
Confidence            7787765

>KOG0268|consensus

Probab=99.52  E-value=2.7e-14  Score=84.31  Aligned_cols=104  Identities=18%  Similarity=0.232  Sum_probs=86.9

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ....++|+| +.-.++++++|..++.||+... .++....+|      .+.+.+++|+|.|+.+++|+-|.+|+||....
T Consensus       231 RTN~IswnP-eafnF~~a~ED~nlY~~DmR~l~~p~~v~~dh------vsAV~dVdfsptG~EfvsgsyDksIRIf~~~~  303 (433)
T KOG0268|consen  231 RTNTICWNP-EAFNFVAANEDHNLYTYDMRNLSRPLNVHKDH------VSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNH  303 (433)
T ss_pred             cccceecCc-cccceeeccccccceehhhhhhcccchhhccc------ceeEEEeccCCCcchhccccccceEEEeecCC
Confidence            346789999 8888899999999999999753 467777777      67899999999999999999999999999987


Q ss_pred             CeEEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133         85 GKLVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        85 ~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.....+... =+.|.++.|+-|.+++++||.|
T Consensus       304 ~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd  336 (433)
T KOG0268|consen  304 GHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDD  336 (433)
T ss_pred             CcchhhhhHhhhheeeEEEEeccccEEEecCCC
Confidence            7665444311 2468999999999999999986

>KOG1332|consensus

Probab=99.52  E-value=1.3e-13  Score=77.89  Aligned_cols=105  Identities=14%  Similarity=0.250  Sum_probs=82.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~   79 (116)
                      ..|-++...- -+.+|++++.|+.|+|+..+.+   +.+.++.+|      ++++..++|..  -|.+|++++-|+.|.|
T Consensus        12 D~IHda~lDy-ygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh------~GPVwqv~wahPk~G~iLAScsYDgkVIi   84 (299)
T KOG1332|consen   12 DMIHDAQLDY-YGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGH------SGPVWKVAWAHPKFGTILASCSYDGKVII   84 (299)
T ss_pred             hhhhHhhhhh-hcceeeeecCCccEEEEEEcCCCCceeeeEecCC------CCCeeEEeecccccCcEeeEeecCceEEE
Confidence            3344444443 4689999999999999999754   457788899      78999999974  5999999999999999


Q ss_pred             EECCCCeEEE--EeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         80 FDNVSGKLVH--SMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~--~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      |.-++++-.+  ....|...|++++|.|.  |-.|+.++.|
T Consensus        85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSD  125 (299)
T KOG1332|consen   85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSD  125 (299)
T ss_pred             EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCC
Confidence            9988885433  34578889999999986  5577777765

>KOG1274|consensus

Probab=99.52  E-value=6.7e-13  Score=85.82  Aligned_cols=104  Identities=13%  Similarity=0.176  Sum_probs=88.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +-++.+++|+. +|++++.|++|-.|++.+..+......+++|      .++|.++.++|++.++|+.+-||.|++|+++
T Consensus        96 tlp~r~~~v~g-~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh------~apVl~l~~~p~~~fLAvss~dG~v~iw~~~  168 (933)
T KOG1274|consen   96 TLPIRDLAVSG-SGKMIAAGSDDTAVKLLNLDDSSQEKVLRGH------DAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ  168 (933)
T ss_pred             eccceEEEEec-CCcEEEeecCceeEEEEeccccchheeeccc------CCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence            45678899998 8899999999999999999999999999999      7799999999999999999999999999999


Q ss_pred             CCeEEEEeecc--------cccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHSMVAH--------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+...+..-        ...+..++|+|++..|+..+
T Consensus       169 ~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~  207 (933)
T KOG1274|consen  169 DGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPP  207 (933)
T ss_pred             cchhhhhcccCCccccccccceeeeeeecCCCCeEEeec
Confidence            98877665421        23567889999966665443

>KOG4283|consensus

Probab=99.51  E-value=2.4e-13  Score=78.78  Aligned_cols=108  Identities=19%  Similarity=0.192  Sum_probs=85.3

Q ss_pred             CCCCceEEEEccCCC--cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDES--TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~--~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~   79 (116)
                      .++.|+.-+++|-..  -++++|..+.+|++-|+.+|.....+.+|      ...|.++.|+|... .+++++.|+.|++
T Consensus       142 me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGH------r~~vlaV~Wsp~~e~vLatgsaDg~irl  215 (397)
T KOG4283|consen  142 MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGH------RDGVLAVEWSPSSEWVLATGSADGAIRL  215 (397)
T ss_pred             cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccc------cCceEEEEeccCceeEEEecCCCceEEE
Confidence            356677777777432  25677788999999999999999999999      67899999999866 6688999999999


Q ss_pred             EECCCC-eEEEE--------------eecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSG-KLVHS--------------MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~-~~~~~--------------~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||++.. .+...              -..|.+.+..++|+.++.++++.+.|
T Consensus       216 WDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd  267 (397)
T KOG4283|consen  216 WDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTD  267 (397)
T ss_pred             EEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCc
Confidence            998743 12221              22467789999999999999887654

>KOG0288|consensus

Probab=99.51  E-value=1.1e-14  Score=86.96  Aligned_cols=108  Identities=21%  Similarity=0.314  Sum_probs=95.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      +|.+.+..+.|-+ +...|++++.|..|++|+....+  ....+.+.      .+.++.+.+.++++.+++++.|+.+++
T Consensus       173 ~h~gev~~v~~l~-~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs------~g~it~~d~d~~~~~~iAas~d~~~r~  245 (459)
T KOG0288|consen  173 AHEGEVHDVEFLR-NSDTLATGGSDRIIKLWNVLGEKSELISTLAGS------LGNITSIDFDSDNKHVIAASNDKNLRL  245 (459)
T ss_pred             ccccccceeEEcc-Ccchhhhcchhhhhhhhhcccchhhhhhhhhcc------CCCcceeeecCCCceEEeecCCCceee
Confidence            4788999999998 78999999999999999998655  45566666      578999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++...+...++.+|...|+++.|......+++|+.|
T Consensus       246 Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~D  282 (459)
T KOG0288|consen  246 WNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSAD  282 (459)
T ss_pred             eeccchhhhhhhcccccceeeehhhccccceeecccc
Confidence            9999999999999999999999998776668888765

>KOG1524|consensus

Probab=99.51  E-value=2.1e-13  Score=84.34  Aligned_cols=109  Identities=13%  Similarity=0.115  Sum_probs=79.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---------ceeEEEe--cCCc-----------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---------KPVVRID--SSQF-----------------------   48 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---------~~~~~~~--~~~~-----------------------   48 (116)
                      |.+.+.+-.|+| +|.-|+++++||.|++|.-..+         +.+....  ....                       
T Consensus       103 H~~A~~~gRW~~-dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~  181 (737)
T KOG1524|consen  103 HAAAISSGRWSP-DGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIR  181 (737)
T ss_pred             hhhhhhhcccCC-CCceeeeecCCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeE
Confidence            667888889999 8899999999999999985421         1111110  0000                       


Q ss_pred             CcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         49 GVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        49 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ...|.+-|.++.|++...+++++++|...++||-. |..+..-..|..++++++|+|+ +.++.+|
T Consensus       182 WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S  245 (737)
T KOG1524|consen  182 WRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWS  245 (737)
T ss_pred             EeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeeee
Confidence            01567889999999999999999999999999965 6666666667777777777777 4444444

>KOG1036|consensus

Probab=99.51  E-value=5.6e-13  Score=77.15  Aligned_cols=108  Identities=11%  Similarity=0.133  Sum_probs=88.8

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCC---CCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSG---GGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .+.++++.| ++.-.+.++-+|.|.+=.+++.    +....|++|......   -.+|++++|+|--..+++|+.||.|.
T Consensus       179 qtR~v~~~p-n~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~  257 (323)
T KOG1036|consen  179 QTRCVALVP-NGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVN  257 (323)
T ss_pred             EEEEEEEec-CCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEE
Confidence            367899999 7788888899999998766644    455677877542111   13688999999988999999999999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||+.+.+.+.++......|..++|+.+|..||+++
T Consensus       258 ~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~  293 (323)
T KOG1036|consen  258 IWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS  293 (323)
T ss_pred             EccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence            999999999999887777899999999999999876

>KOG2111|consensus

Probab=99.50  E-value=4.5e-12  Score=73.90  Aligned_cols=87  Identities=22%  Similarity=0.336  Sum_probs=73.7

Q ss_pred             eeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEECCCCeEEEEeec--cccc
Q psy17133         23 AFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDNVSGKLVHSMVA--HLDA   97 (116)
Q Consensus        23 ~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~~~~~~~~~--~~~~   97 (116)
                      |...|+|++-|+...+.  ...++.|      .+.|.+++++.+|..+|+++..|+ |+|||.++|+.++.++.  ....
T Consensus       155 g~k~GqvQi~dL~~~~~~~p~~I~AH------~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~  228 (346)
T KOG2111|consen  155 GFKTGQVQIVDLASTKPNAPSIINAH------DSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRAD  228 (346)
T ss_pred             CCccceEEEEEhhhcCcCCceEEEcc------cCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchhe
Confidence            34678999999875443  4667778      679999999999999999999886 89999999999998873  3457


Q ss_pred             EEEEEECCCCcEEEeeec
Q psy17133         98 VTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        98 v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+++|+|+..+|+.+|.
T Consensus       229 iy~iaFSp~~s~LavsSd  246 (346)
T KOG2111|consen  229 IYCIAFSPNSSWLAVSSD  246 (346)
T ss_pred             EEEEEeCCCccEEEEEcC
Confidence            999999999999998774

>KOG0644|consensus

Probab=99.49  E-value=1.1e-14  Score=93.59  Aligned_cols=98  Identities=20%  Similarity=0.293  Sum_probs=92.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|+|..|.. .+.+++++++|..++||...++..+..+.+|      .+.++.++.+.+...+++++.|..|++|.
T Consensus       188 gH~naVyca~fDr-tg~~Iitgsdd~lvKiwS~et~~~lAs~rGh------s~ditdlavs~~n~~iaaaS~D~vIrvWr  260 (1113)
T KOG0644|consen  188 GHRNAVYCAIFDR-TGRYIITGSDDRLVKIWSMETARCLASCRGH------SGDITDLAVSSNNTMIAAASNDKVIRVWR  260 (1113)
T ss_pred             hhhhheeeeeecc-ccceEeecCccceeeeeeccchhhhccCCCC------ccccchhccchhhhhhhhcccCceEEEEe
Confidence            4667899999998 8999999999999999999999999999999      78999999999888999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQ  106 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~  106 (116)
                      +..+.++..+.+|.+.|++++|+|-
T Consensus       261 l~~~~pvsvLrghtgavtaiafsP~  285 (1113)
T KOG0644|consen  261 LPDGAPVSVLRGHTGAVTAIAFSPR  285 (1113)
T ss_pred             cCCCchHHHHhccccceeeeccCcc
Confidence            9999999999999999999999985

>KOG2096|consensus

Probab=99.49  E-value=1.3e-12  Score=76.53  Aligned_cols=103  Identities=17%  Similarity=0.231  Sum_probs=84.4

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC--
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV--   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~--   83 (116)
                      .+.++.... ++.+|.+++.+..|.+|++. |+.+..+...      ...-...+++|+|+++++++..-.+++|++-  
T Consensus       189 ~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idtn------q~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~  260 (420)
T KOG2096|consen  189 DIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDTN------QSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFT  260 (420)
T ss_pred             ceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeeccc------cccccceeeCCCCcEEEEecCCCCceEEEEEec
Confidence            344455444 77899999999999999998 8888888776      4456778899999999999999999999863  


Q ss_pred             -CC-----eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 -SG-----KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 -~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                       .|     .....+.+|...|..++|+++...++|.|.|
T Consensus       261 kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD  299 (420)
T KOG2096|consen  261 KDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD  299 (420)
T ss_pred             cCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC
Confidence             22     2344577999999999999999999999886

>KOG0274|consensus

Probab=99.49  E-value=3.4e-13  Score=85.15  Aligned_cols=102  Identities=17%  Similarity=0.284  Sum_probs=87.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.++|.++...   +..+++|+.|+.|.+|+..+++.+..+.+|      ...|.++.+.+. ..+++++.|+.|++||+
T Consensus       330 h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH------~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl  399 (537)
T KOG0274|consen  330 HTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH------TGRVYSLIVDSE-NRLLSGSLDTTIKVWDL  399 (537)
T ss_pred             ccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCC------cceEEEEEecCc-ceEEeeeeccceEeecC
Confidence            78899999886   489999999999999999999999999999      788999977665 88999999999999999


Q ss_pred             CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+. +++..+.+|..-+..+  ...+++|++++.|
T Consensus       400 ~~~~~c~~tl~~h~~~v~~l--~~~~~~Lvs~~aD  432 (537)
T KOG0274|consen  400 RTKRKCIHTLQGHTSLVSSL--LLRDNFLVSSSAD  432 (537)
T ss_pred             CchhhhhhhhcCCccccccc--ccccceeEecccc
Confidence            999 8888898888777555  3456677777654

>KOG2048|consensus

Probab=99.49  E-value=7.2e-12  Score=78.97  Aligned_cols=106  Identities=22%  Similarity=0.284  Sum_probs=92.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ..+.|.+++|++  +..|.+.+.++.|..||+.++++...+...      .+.|.+++.+|.+..++.+++||.+..++.
T Consensus        68 ~drsIE~L~W~e--~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~------gg~IWsiai~p~~~~l~IgcddGvl~~~s~  139 (691)
T KOG2048|consen   68 EDRSIESLAWAE--GGRLFSSGLSGSITEWDLHTLKQKYNIDSN------GGAIWSIAINPENTILAIGCDDGVLYDFSI  139 (691)
T ss_pred             CCCceeeEEEcc--CCeEEeecCCceEEEEecccCceeEEecCC------CcceeEEEeCCccceEEeecCCceEEEEec
Confidence            457799999995  478888889999999999999999888877      678999999999999999999998888888


Q ss_pred             CCCeEEEE--eecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHS--MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..++....  +....+++.+++|+|++..+++||.|
T Consensus       140 ~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D  175 (691)
T KOG2048|consen  140 GPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID  175 (691)
T ss_pred             CCceEEEEeecccccceEEEEEecCCccEEEecccC
Confidence            88776544  33456899999999999999999876

>KOG2139|consensus

Probab=99.48  E-value=3.9e-12  Score=75.50  Aligned_cols=102  Identities=21%  Similarity=0.289  Sum_probs=77.3

Q ss_pred             CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +-+|+.+.|.+ ++..+++++ .+..+.+||..++..+....-.      .+.+.-+.|+||+.+++++.-|+..++|+.
T Consensus       195 h~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~g------lgg~slLkwSPdgd~lfaAt~davfrlw~e  267 (445)
T KOG2139|consen  195 HNPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIPLIPKG------LGGFSLLKWSPDGDVLFAATCDAVFRLWQE  267 (445)
T ss_pred             CceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCcccccccC------CCceeeEEEcCCCCEEEEecccceeeeehh
Confidence            35789999999 678787776 6788999999987755444222      357889999999999999999999999964


Q ss_pred             CCC-eEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ... ...+- ....+.|+..+|+|+|++|+-+
T Consensus       268 ~q~wt~erw-~lgsgrvqtacWspcGsfLLf~  298 (445)
T KOG2139|consen  268 NQSWTKERW-ILGSGRVQTACWSPCGSFLLFA  298 (445)
T ss_pred             cccceecce-eccCCceeeeeecCCCCEEEEE
Confidence            332 22222 2234589999999999987643

>KOG0771|consensus

Probab=99.48  E-value=6.6e-13  Score=79.37  Aligned_cols=70  Identities=10%  Similarity=0.164  Sum_probs=62.3

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      ..++|++ ++..+++++.|+.+++|+......+.....|      ...|.++.|+||++++++.+.| ..++|+..++
T Consensus       148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~------~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g  217 (398)
T KOG0771|consen  148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILEEIAH------HAEVKDLDFSPDGKFLASIGAD-SARVWSVNTG  217 (398)
T ss_pred             eEEEEcC-CCCEeeeccccceEEEEecCcchhhhhhHhh------cCccccceeCCCCcEEEEecCC-ceEEEEeccC
Confidence            6788998 8899999999999999998877777776666      5789999999999999999999 9999998876

>KOG0301|consensus

Probab=99.48  E-value=4.7e-12  Score=80.06  Aligned_cols=102  Identities=13%  Similarity=0.232  Sum_probs=87.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|+..|..+++-+ + ..+++++.|+.|++|++ +++.+.++.+|      ++.+.++...+++..++++++|+++++|+
T Consensus       177 gHtD~VRgL~vl~-~-~~flScsNDg~Ir~w~~-~ge~l~~~~gh------tn~vYsis~~~~~~~Ivs~gEDrtlriW~  247 (745)
T KOG0301|consen  177 GHTDCVRGLAVLD-D-SHFLSCSNDGSIRLWDL-DGEVLLEMHGH------TNFVYSISMALSDGLIVSTGEDRTLRIWK  247 (745)
T ss_pred             cchhheeeeEEec-C-CCeEeecCCceEEEEec-cCceeeeeecc------ceEEEEEEecCCCCeEEEecCCceEEEee
Confidence            3788999999987 3 67888999999999999 68899999999      77899999888889999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..  ++.+.+......++++.+-++|..++.+|
T Consensus       248 ~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~S  278 (745)
T KOG0301|consen  248 KD--ECVQVITLPTTSIWSAKVLLNGDIVVGGS  278 (745)
T ss_pred             cC--ceEEEEecCccceEEEEEeeCCCEEEecc
Confidence            76  77777775555889998888888776554

>KOG4328|consensus

Probab=99.47  E-value=2.5e-13  Score=82.16  Aligned_cols=115  Identities=17%  Similarity=0.173  Sum_probs=84.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEE---------------------ecCCc----------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRI---------------------DSSQF----------   48 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~---------------------~~~~~----------   48 (116)
                      +|.++|.++.|+|.+..++++.+.||.+++-|++.+...  ...                     -.+..          
T Consensus       232 ~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~  311 (498)
T KOG4328|consen  232 PHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTD  311 (498)
T ss_pred             cCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecC
Confidence            578899999999988889999999999999998743211  000                     00000          


Q ss_pred             ------CcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCeE----EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         49 ------GVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGKL----VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        49 ------~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                            ..-|...|..++++|..+ ++++++.|++++|||++.-..    +-....|...|.+..|+|++-.|+|.+.|
T Consensus       312 ~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D  390 (498)
T KOG4328|consen  312 GSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQD  390 (498)
T ss_pred             CccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccC
Confidence                  003445789999999754 789999999999999874321    22233588899999999987778888765

>KOG0307|consensus

Probab=99.47  E-value=1.4e-13  Score=90.28  Aligned_cols=111  Identities=13%  Similarity=0.121  Sum_probs=85.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~   80 (116)
                      .|+|.|..++|++..++.+++|+.+|+|.|||+..-+.-..+....    ....|.+++|+.. ..++++++.++++.||
T Consensus       114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~----~~~eI~~lsWNrkvqhILAS~s~sg~~~iW  189 (1049)
T KOG0307|consen  114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQA----PPSEIKCLSWNRKVSHILASGSPSGRAVIW  189 (1049)
T ss_pred             ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCC----CcccceEeccchhhhHHhhccCCCCCceec
Confidence            4899999999999777899999999999999998644433332221    1567999999976 5688999999999999


Q ss_pred             ECCCCeEEEEeeccc--ccEEEEEECCCCc-EEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHL--DAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      |++..+.+-.+..+.  ..+..++|+|+.- .+++++.|
T Consensus       190 Dlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d  228 (1049)
T KOG0307|consen  190 DLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD  228 (1049)
T ss_pred             cccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence            999877666555333  3578999999754 55566554

>KOG2106|consensus

Probab=99.47  E-value=5.1e-12  Score=77.71  Aligned_cols=102  Identities=11%  Similarity=0.104  Sum_probs=84.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |......++..| ..+++++++.|+.+++|+  +.+++......       .+..+++|+|.| .++.+...|...+.|.
T Consensus       367 h~delwgla~hp-s~~q~~T~gqdk~v~lW~--~~k~~wt~~~~-------d~~~~~~fhpsg-~va~Gt~~G~w~V~d~  435 (626)
T KOG2106|consen  367 HGDELWGLATHP-SKNQLLTCGQDKHVRLWN--DHKLEWTKIIE-------DPAECADFHPSG-VVAVGTATGRWFVLDT  435 (626)
T ss_pred             cccceeeEEcCC-ChhheeeccCcceEEEcc--CCceeEEEEec-------CceeEeeccCcc-eEEEeeccceEEEEec
Confidence            556678888999 779999999999999999  45555444433       368899999999 9999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++...+..-. ...+++.++|+|+|.+||.|+.|
T Consensus       436 e~~~lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  436 ETQDLVTIHT-DNEQLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             ccceeEEEEe-cCCceEEEEEcCCCCEEEEecCC
Confidence            9855555444 37789999999999999999986

>KOG0270|consensus

Probab=99.47  E-value=3.1e-13  Score=81.39  Aligned_cols=112  Identities=17%  Similarity=0.294  Sum_probs=82.0

Q ss_pred             CCceEEEEccC------CCcEEEEeeCCCeEEEEECCCCcee---EEEe----------cC--CcCcCCCCceeEEEEcC
Q psy17133          5 GTPTSIDFVRD------ESTKMVTAFDNSACVLFDLETGKPV---VRID----------SS--QFGVSGGGGINRVVCHP   63 (116)
Q Consensus         5 ~~v~~~~~~~~------~~~~l~~~~~~~~v~i~~~~~~~~~---~~~~----------~~--~~~~~~~~~i~~~~~~~   63 (116)
                      ..+.|+.|...      .+++++.|..+..|.|||+.-...+   ..+.          +.  ....+|+..+.++.|+.
T Consensus       174 afPLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~  253 (463)
T KOG0270|consen  174 AFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNR  253 (463)
T ss_pred             CcchhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcc
Confidence            34456666421      3679999999999999998622111   1111          00  00113455677888887


Q ss_pred             C-CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         64 T-LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        64 ~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      . ...|++++.|.+|++||+.++++..++..|...|+++.|+| ...+|++||.|
T Consensus       254 ~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D  308 (463)
T KOG0270|consen  254 NFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYD  308 (463)
T ss_pred             ccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecccc
Confidence            6 45899999999999999999999999998999999999998 56788898865

>KOG2111|consensus

Probab=99.46  E-value=3.8e-11  Score=70.14  Aligned_cols=78  Identities=14%  Similarity=0.165  Sum_probs=69.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      -|.+.|.+++.+. +|.++++++..|+ |+|||..+|..+.++.-...    ...+.+++|+|+..+++.+++.|++.++
T Consensus       179 AH~s~Iacv~Ln~-~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d----~A~iy~iaFSp~~s~LavsSdKgTlHiF  253 (346)
T KOG2111|consen  179 AHDSDIACVALNL-QGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD----RADIYCIAFSPNSSWLAVSSDKGTLHIF  253 (346)
T ss_pred             cccCceeEEEEcC-CccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc----hheEEEEEeCCCccEEEEEcCCCeEEEE
Confidence            4889999999998 8999999998887 78999999999999864433    5679999999999999999999999999


Q ss_pred             ECCC
Q psy17133         81 DNVS   84 (116)
Q Consensus        81 ~~~~   84 (116)
                      .++.
T Consensus       254 ~l~~  257 (346)
T KOG2111|consen  254 SLRD  257 (346)
T ss_pred             Eeec
Confidence            8764

>KOG4227|consensus

Probab=99.44  E-value=4.7e-12  Score=76.16  Aligned_cols=109  Identities=9%  Similarity=0.065  Sum_probs=89.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      .|.|.|.++.|+. ++++|++|+.|..+++|.+..      .+++.....+     |.+.|.+++|.....++++|..++
T Consensus        54 ~H~GCiNAlqFS~-N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~-----H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   54 EHTGCINALQFSH-NDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHP-----HRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhccccceeeecc-CCeEEeecCCcceeeeechHHHHhhcCCCCceeccCc-----cccceEEEEEccCCeeEecCCCcc
Confidence            4789999999998 789999999999999999862      2444444332     357899999999999999999999


Q ss_pred             eEEEEECCCCeEEEEeecc--cccEEEEEECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|.+.|+++.+.+..+...  .+.|+.+.-+|..+.|++.+.+
T Consensus       128 ~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~  170 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRA  170 (609)
T ss_pred             eeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecC
Confidence            9999999999988877632  3489999999998888877653

>KOG2055|consensus

Probab=99.43  E-value=7.9e-12  Score=75.99  Aligned_cols=102  Identities=14%  Similarity=0.184  Sum_probs=87.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      .+.....+| ++++|+..+.+|.|++....+++.+..++..       +.+..++|+.+++.++..+.+|.|.+||+.+.
T Consensus       305 ~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~Kie-------G~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~  376 (514)
T KOG2055|consen  305 SMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIE-------GVVSDFTFSSDSKELLASGGTGEVYVWNLRQN  376 (514)
T ss_pred             hhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeec-------cEEeeEEEecCCcEEEEEcCCceEEEEecCCc
Confidence            455677788 7899999999999999999999999988866       67999999999999999999999999999999


Q ss_pred             eEEEEeecccc-cEEEEEECCCCcEEEeeec
Q psy17133         86 KLVHSMVAHLD-AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        86 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+++.+....+ .-+.+|.++++++||+||.
T Consensus       377 ~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~  407 (514)
T KOG2055|consen  377 SCLHRFVDDGSVHGTSLCISLNGSYLATGSD  407 (514)
T ss_pred             ceEEEEeecCccceeeeeecCCCceEEeccC
Confidence            88888763222 3467888899999999985

>KOG0650|consensus

Probab=99.43  E-value=1.7e-11  Score=76.82  Aligned_cols=105  Identities=16%  Similarity=0.220  Sum_probs=80.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~   79 (116)
                      .|.+.|.+++..| .|.+|++|+.||.|++|.+.++..+..+...       +.|.+++|+|.+.  +++.+..+. +.+
T Consensus       398 GHtg~Vr~iSvdp-~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-------~~I~~vaw~P~~~~~vLAvA~~~~-~~i  468 (733)
T KOG0650|consen  398 GHTGLVRSISVDP-SGEWLASGSDDGTVRIWEIATGRCVRTVQFD-------SEIRSVAWNPLSDLCVLAVAVGEC-VLI  468 (733)
T ss_pred             ccCCeEEEEEecC-CcceeeecCCCCcEEEEEeecceEEEEEeec-------ceeEEEEecCCCCceeEEEEecCc-eEE
Confidence            5899999999999 8999999999999999999999999988766       5799999999754  555554443 444


Q ss_pred             EECCCC-------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         80 FDNVSG-------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~~~-------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+..-|                                     .-++....|...|..+.|+..|.||++..-
T Consensus       469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~  541 (733)
T KOG0650|consen  469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMP  541 (733)
T ss_pred             eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEecc
Confidence            432211                                     001222245678999999999999998653

>KOG2445|consensus

Probab=99.41  E-value=4.4e-11  Score=69.74  Aligned_cols=107  Identities=17%  Similarity=0.235  Sum_probs=82.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcC-C-CCEEEEEeCCCe
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHP-T-LPLTITAHDDRH   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~d~~   76 (116)
                      |..-|.++.|.+ .|+.+++++.|.++.|||..+.    ......+.|      .+.|..+.|.+ . |+.+++++.|++
T Consensus        12 h~DlihdVs~D~-~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah------~~Si~rV~WAhPEfGqvvA~cS~Drt   84 (361)
T KOG2445|consen   12 HKDLIHDVSFDF-YGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAH------DGSIWRVVWAHPEFGQVVATCSYDRT   84 (361)
T ss_pred             Ccceeeeeeecc-cCceeeeccCCCcEEEEeccCCCCceEEeeeEEec------CCcEEEEEecCccccceEEEEecCCc
Confidence            456689999999 8899999999999999996532    345566777      67899999874 4 899999999999


Q ss_pred             EEEEECCCC-------e--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         77 IRFFDNVSG-------K--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~-------~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      +.||+-+..       +  ...++......|++++|.|.  |-.|++++.|
T Consensus        85 v~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aD  135 (361)
T KOG2445|consen   85 VSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASAD  135 (361)
T ss_pred             eeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccC
Confidence            999975211       1  22344456678999999994  6677877765

>KOG0300|consensus

Probab=99.41  E-value=3e-12  Score=75.16  Aligned_cols=66  Identities=15%  Similarity=0.195  Sum_probs=55.6

Q ss_pred             CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|.+.+.+..|-..++.++++++|.+..+||+++++.+..+.+|....+.++-+|..+.+++.+.|
T Consensus       270 gH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrD  335 (481)
T KOG0300|consen  270 GHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRD  335 (481)
T ss_pred             ccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccC
Confidence            445556666666677788888888888899999999999999999999999999999999998876

>KOG0321|consensus

Probab=99.41  E-value=2.1e-12  Score=81.00  Aligned_cols=77  Identities=18%  Similarity=0.207  Sum_probs=67.6

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE--EecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR--IDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI   77 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i   77 (116)
                      |.|-..|..+.|.| ....|++++.|.+++.||+++.+.+..  +.+|      .+.+.+++|+|..+ .+++|+.||.+
T Consensus        97 ~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH------~~SvkS~cf~~~n~~vF~tGgRDg~i  169 (720)
T KOG0321|consen   97 LAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH------TGSVKSECFMPTNPAVFCTGGRDGEI  169 (720)
T ss_pred             ccccceeEeeccCC-CceeEEEccCCceeeeeeeccceeecceeeccc------ccccchhhhccCCCcceeeccCCCcE
Confidence            46888999999999 778999999999999999998877665  7777      67899999999765 78889999999


Q ss_pred             EEEECCC
Q psy17133         78 RFFDNVS   84 (116)
Q Consensus        78 ~~~~~~~   84 (116)
                      .|||++.
T Consensus       170 llWD~R~  176 (720)
T KOG0321|consen  170 LLWDCRC  176 (720)
T ss_pred             EEEEEec
Confidence            9999863

>KOG0290|consensus

Probab=99.40  E-value=2.6e-11  Score=70.29  Aligned_cols=112  Identities=14%  Similarity=0.138  Sum_probs=81.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-------------eEEEecCCcC-------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-------------VVRIDSSQFG-------------------   49 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-------------~~~~~~~~~~-------------------   49 (116)
                      .|.+.|..++|.....+.+++.+.||.+++||++..+.             +.++......                   
T Consensus       194 AHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDi  273 (364)
T KOG0290|consen  194 AHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDI  273 (364)
T ss_pred             ecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEe
Confidence            58899999999985557888899999999999874321             1122111110                   


Q ss_pred             ----------cCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCCeE------EEEeecccccEEEEEECC-CCcEEE
Q psy17133         50 ----------VSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSGKL------VHSMVAHLDAVTSLAVDP-QGLYIL  111 (116)
Q Consensus        50 ----------~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~------~~~~~~~~~~v~~~~~~~-~~~~l~  111 (116)
                                .+|.+.|+.++|.|. ...++++++|..+.+||+.+.-.      +-.+ ...+.|..+.|++ .+.+++
T Consensus       274 R~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay-~a~~EVNqi~Ws~~~~Dwia  352 (364)
T KOG0290|consen  274 RVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAY-TAGGEVNQIQWSSSQPDWIA  352 (364)
T ss_pred             cCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhh-hccceeeeeeecccCCCEEE
Confidence                      078899999999997 56999999999999999975322      1112 2467899999996 566777


Q ss_pred             eee
Q psy17133        112 SGT  114 (116)
Q Consensus       112 ~~s  114 (116)
                      .+.
T Consensus       353 i~~  355 (364)
T KOG0290|consen  353 ICF  355 (364)
T ss_pred             EEe
Confidence            654

>KOG3881|consensus

Probab=99.40  E-value=1.4e-11  Score=73.55  Aligned_cols=104  Identities=20%  Similarity=0.240  Sum_probs=91.4

Q ss_pred             CceEEEEccCC--CcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          6 TPTSIDFVRDE--STKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      .++++.|.+ +  ...++++..-+++++||...+ +++..|...      ...+.++...|++.+++++...+.+..||+
T Consensus       204 W~tdi~Fl~-g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~------E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~  276 (412)
T KOG3881|consen  204 WITDIRFLE-GSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFL------ENPISSTGLTPSGNFIYTGNTKGQLAKFDL  276 (412)
T ss_pred             eeccceecC-CCCCceEEEEecceeEEEecCcccCcceeEeccc------cCcceeeeecCCCcEEEEecccchhheecc
Confidence            357788887 5  678999999999999999865 467777766      568999999999999999999999999999


Q ss_pred             CCCeEEEE-eecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHS-MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.++.... +.+..+.++++..+|.++++++++.|
T Consensus       277 r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLD  311 (412)
T KOG3881|consen  277 RGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLD  311 (412)
T ss_pred             cCceeeccccCCccCCcceEEEcCCCceEEeeccc
Confidence            99988776 77788899999999999999999876

>KOG4378|consensus

Probab=99.40  E-value=8.4e-12  Score=76.83  Aligned_cols=103  Identities=16%  Similarity=0.287  Sum_probs=83.7

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~   83 (116)
                      .|.-+.|+|.....|.+++.+|.|.+||+....+...+ +.|      ..+...++|+|. ..++++.+.|..|.+||+.
T Consensus       166 svRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~H------sAP~~gicfspsne~l~vsVG~Dkki~~yD~~  239 (673)
T KOG4378|consen  166 SVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAH------SAPCRGICFSPSNEALLVSVGYDKKINIYDIR  239 (673)
T ss_pred             eEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhc------cCCcCcceecCCccceEEEecccceEEEeecc
Confidence            45678999965566778899999999999877777665 455      668899999997 5588899999999999998


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+....+. ...+...++|.++|-+|+.|+.
T Consensus       240 s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s  270 (673)
T KOG4378|consen  240 SQASTDRLT-YSHPLSTVAFSECGTYLCAGNS  270 (673)
T ss_pred             cccccceee-ecCCcceeeecCCceEEEeecC
Confidence            766665554 4568899999999999988763

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.40  E-value=5.3e-11  Score=70.25  Aligned_cols=89  Identities=13%  Similarity=0.165  Sum_probs=70.7

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      +.+++++.++.+++||..+++.+..+..+       ..+..++|+|+++.+ +++..++.+++||..+++.+..+..+. 
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~-------~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-   73 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVG-------QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-   73 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECC-------CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-
Confidence            56788889999999999988888888765       236779999999866 566778999999999988877665433 


Q ss_pred             cEEEEEECCCCcEEEeee
Q psy17133         97 AVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s  114 (116)
                      .+..++|+|+++.+++++
T Consensus        74 ~~~~~~~~~~g~~l~~~~   91 (300)
T TIGR03866        74 DPELFALHPNGKILYIAN   91 (300)
T ss_pred             CccEEEECCCCCEEEEEc
Confidence            356789999999776543

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4378|consensus

Probab=99.39  E-value=1.5e-11  Score=75.80  Aligned_cols=98  Identities=16%  Similarity=0.149  Sum_probs=83.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |..+...++|+|.+...+++.+.|.+|.+||....+....+...       .+...++|.++|.+++.|...|.|..||+
T Consensus       207 HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~-------~Plstvaf~~~G~~L~aG~s~G~~i~YD~  279 (673)
T KOG4378|consen  207 HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYS-------HPLSTVAFSECGTYLCAGNSKGELIAYDM  279 (673)
T ss_pred             ccCCcCcceecCCccceEEEecccceEEEeecccccccceeeec-------CCcceeeecCCceEEEeecCCceEEEEec
Confidence            66778899999977778888899999999999876666666543       57899999999999999999999999999


Q ss_pred             CC-CeEEEEeecccccEEEEEECCCC
Q psy17133         83 VS-GKLVHSMVAHLDAVTSLAVDPQG  107 (116)
Q Consensus        83 ~~-~~~~~~~~~~~~~v~~~~~~~~~  107 (116)
                      +. ..++..+..|...|++++|-|..
T Consensus       280 R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  280 RSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             ccCCCCceEeeecccceeEEEeeecc
Confidence            84 45677788899999999997764

>KOG1272|consensus

Probab=99.39  E-value=3.1e-13  Score=82.08  Aligned_cols=106  Identities=20%  Similarity=0.278  Sum_probs=95.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...|..+.|.| ..-+|++++..|.+..-|+.+|+.+..+...      .+.+..++-+|-.-.+-.|...|+|.+|...
T Consensus       209 ~~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~------~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~  281 (545)
T KOG1272|consen  209 HIRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLVASIRTG------AGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN  281 (545)
T ss_pred             cCchhhhcccc-hhheeeecccCCceEEEeechhhhhHHHHcc------CCccchhhcCCccceEEEcCCCceEEecCCC
Confidence            46788899999 5566777888999999999999999998877      5778889999999999999999999999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..+.+..+..|.++|+++++.++|++++|++.|
T Consensus       282 skePLvKiLcH~g~V~siAv~~~G~YMaTtG~D  314 (545)
T KOG1272|consen  282 SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLD  314 (545)
T ss_pred             CcchHHHHHhcCCCcceEEECCCCcEEeecccc
Confidence            899888888999999999999999999999876

>KOG2110|consensus

Probab=99.39  E-value=4.1e-11  Score=71.14  Aligned_cols=105  Identities=14%  Similarity=0.264  Sum_probs=80.8

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~~~   81 (116)
                      ...|.++.++.   +.|++.-++ +++|||+.+.+.+.++.....   +...+..+..++.+.+++.-+  ..|.|.+||
T Consensus        87 pt~IL~VrmNr---~RLvV~Lee-~IyIydI~~MklLhTI~t~~~---n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d  159 (391)
T KOG2110|consen   87 PTSILAVRMNR---KRLVVCLEE-SIYIYDIKDMKLLHTIETTPP---NPKGLCALSPNNANCYLAYPGSTTSGDVVLFD  159 (391)
T ss_pred             CCceEEEEEcc---ceEEEEEcc-cEEEEecccceeehhhhccCC---CccceEeeccCCCCceEEecCCCCCceEEEEE
Confidence            45677777754   566666544 499999999999888765411   033455666666666777643  368999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+-+....+..|.+.+-+++|+++|.+|||+|.
T Consensus       160 ~~nl~~v~~I~aH~~~lAalafs~~G~llATASe  193 (391)
T KOG2110|consen  160 TINLQPVNTINAHKGPLAALAFSPDGTLLATASE  193 (391)
T ss_pred             cccceeeeEEEecCCceeEEEECCCCCEEEEecc
Confidence            9999999999999999999999999999999985

>KOG1188|consensus

Probab=99.39  E-value=1.1e-11  Score=72.89  Aligned_cols=109  Identities=17%  Similarity=0.275  Sum_probs=79.7

Q ss_pred             CCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEE--ecCCcCcCCCCceeEEEEcCCCCEEEEEeC----CC
Q psy17133          3 YNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRI--DSSQFGVSGGGGINRVVCHPTLPLTITAHD----DR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----d~   75 (116)
                      +...+..+.|... .++.+.+++.||.|++||++.......+  ..+.     .....+++.+-.+.+++++.+    +-
T Consensus        69 ~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~-----~~~f~~ld~nck~~ii~~GtE~~~s~A  143 (376)
T KOG1188|consen   69 PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQS-----GTPFICLDLNCKKNIIACGTELTRSDA  143 (376)
T ss_pred             CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCC-----CCcceEeeccCcCCeEEeccccccCce
Confidence            3455667777653 4578889999999999999976655444  3331     235666776667788888764    56


Q ss_pred             eEEEEECCCCeE-EEEe-ecccccEEEEEECC-CCcEEEeeecC
Q psy17133         76 HIRFFDNVSGKL-VHSM-VAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      .+.+||++..+. +..+ ..|...|+.++|+| +.+.|++||.|
T Consensus       144 ~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD  187 (376)
T KOG1188|consen  144 SVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVD  187 (376)
T ss_pred             EEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeeccc
Confidence            899999986655 5544 36888999999999 56788999876

>KOG1408|consensus

Probab=99.38  E-value=2.3e-11  Score=77.93  Aligned_cols=62  Identities=32%  Similarity=0.549  Sum_probs=54.5

Q ss_pred             ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec---ccccEEEEEECCCCcEEEeeecC
Q psy17133         55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA---HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+..+++.|+.+++++++.|..|+||++++++..+.+++   |.+....+...|.|.|+++.+.|
T Consensus       598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsd  662 (1080)
T KOG1408|consen  598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSD  662 (1080)
T ss_pred             eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecC
Confidence            466788899999999999999999999999999999874   55678889999999999987765

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.38  E-value=3.9e-11  Score=67.32  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=62.1

Q ss_pred             CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------   73 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------   73 (116)
                      +...+..+.|+| +|+++++++   ..|.+.+||..+.+.+..++..        .+..++|+|+|++++++..      
T Consensus        99 ~~~~~n~i~wsP-~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~--------~~t~~~WsPdGr~~~ta~t~~r~~~  169 (194)
T PF08662_consen   99 GTQPRNTISWSP-DGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS--------DATDVEWSPDGRYLATATTSPRLRV  169 (194)
T ss_pred             cCCCceEEEECC-CCCEEEEEEccCCCcEEEEEECCCCEEeeccccC--------cEEEEEEcCCCCEEEEEEeccceec
Confidence            456778899999 888888875   3578999999987777666533        4789999999999988764      


Q ss_pred             CCeEEEEECCCCeEEEEe
Q psy17133         74 DRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~   91 (116)
                      |+.++||+.. |+.+...
T Consensus       170 dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  170 DNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             cccEEEEEec-CeEeEec
Confidence            6889999985 6665543

>KOG2106|consensus

Probab=99.37  E-value=1.1e-10  Score=72.04  Aligned_cols=104  Identities=15%  Similarity=0.238  Sum_probs=82.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ..++.++.|+| .+ .++.|+..|...+.|.++.. +..+...      ..+++.++++|+|..+|.++.|+.|.+|.+.
T Consensus       407 ~d~~~~~~fhp-sg-~va~Gt~~G~w~V~d~e~~~-lv~~~~d------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs  477 (626)
T KOG2106|consen  407 EDPAECADFHP-SG-VVAVGTATGRWFVLDTETQD-LVTIHTD------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS  477 (626)
T ss_pred             cCceeEeeccC-cc-eEEEeeccceEEEEecccce-eEEEEec------CCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence            45678999999 66 99999999999999998744 4444433      3689999999999999999999999999986


Q ss_pred             C-CeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 S-GKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~-~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      . +...... ..+.+.++.+.|++|+++|.+.+.|
T Consensus       478 ~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d  512 (626)
T KOG2106|consen  478 ANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGD  512 (626)
T ss_pred             CCCcEEEEeeeecCceeEEeeecCCCceEEeccCc
Confidence            4 4443332 2344789999999999999987754

>KOG0642|consensus

Probab=99.37  E-value=7.4e-12  Score=77.51  Aligned_cols=107  Identities=20%  Similarity=0.244  Sum_probs=88.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      |...+..+.|.| ....+++++.++.+.+|.+..        -+++.+|.+|      .++|.++++.+++..+++++-|
T Consensus       293 ~~d~ir~l~~~~-sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH------~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  293 HDDCIRALAFHP-SEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAH------EGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             chhhhhhhhcCC-CCCeEEEeccccchhhhhhcccCCccccceeeeEEEecc------cCceEEEEecCCceEEEeeccC
Confidence            456678888988 678899999999999999931        2456788888      7899999999999999999999


Q ss_pred             CeEEEEECCC----------CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVS----------GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |.|+.|++..          ......+.+|...++.+++++....|++++.|
T Consensus       366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D  417 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD  417 (577)
T ss_pred             ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCC
Confidence            9999996542          12344567899999999999988889888765

>KOG4547|consensus

Probab=99.36  E-value=6.1e-11  Score=73.73  Aligned_cols=102  Identities=17%  Similarity=0.143  Sum_probs=89.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.++.++. +...|.+++.|.++-.|+...++....+.+.      ...+.+++++||+..+++++  +.|++|+
T Consensus       100 ~h~~~v~~~~~~~-~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~------~~~~~sl~is~D~~~l~~as--~~ik~~~  170 (541)
T KOG4547|consen  100 KHYGNVNEILDAQ-RLGCIYSVGADLKVVYILEKEKVIIRIWKEQ------KPLVSSLCISPDGKILLTAS--RQIKVLD  170 (541)
T ss_pred             CCCCcceeeeccc-ccCceEecCCceeEEEEecccceeeeeeccC------CCccceEEEcCCCCEEEecc--ceEEEEE
Confidence            3778899998887 7788999999999999999989888888877      56789999999999998885  7899999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCC-----CcEEEe
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQ-----GLYILS  112 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~  112 (116)
                      +++++.+..+.+|.+.|+.++|.-+     |.++.+
T Consensus       171 ~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLs  206 (541)
T KOG4547|consen  171 IETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLS  206 (541)
T ss_pred             ccCceEEEEecCCCcceEEEEEEEeccccccceeee
Confidence            9999999999999999999999765     666654

>KOG1963|consensus

Probab=99.35  E-value=5.3e-11  Score=76.80  Aligned_cols=106  Identities=6%  Similarity=0.010  Sum_probs=85.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--C--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--G--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.-.+++.+++| ++++++++..+|+|.+|.-..  .  ..-..+..|      ...|.++.|+++|.++++|+..+.+.
T Consensus       204 Htf~~t~~~~sp-n~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH------~~~V~~L~fS~~G~~LlSGG~E~VLv  276 (792)
T KOG1963|consen  204 HTFNITCVALSP-NERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWH------HDEVNSLSFSSDGAYLLSGGREGVLV  276 (792)
T ss_pred             hcccceeEEecc-ccceEEEeccCCcEEEEeccccccccccceEEEec------ccccceeEEecCCceEeecccceEEE
Confidence            455578999999 889999999999999996442  1  234456667      56899999999999999999999999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|.+.+++ .+-+..-.+.|..+.++||+...+....|
T Consensus       277 ~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~D  313 (792)
T KOG1963|consen  277 LWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLED  313 (792)
T ss_pred             EEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecC
Confidence            99999888 33344456789999999999887765544

>KOG1272|consensus

Probab=99.35  E-value=3.8e-12  Score=77.48  Aligned_cols=99  Identities=16%  Similarity=0.241  Sum_probs=81.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+..+.-+| -...+-+|..+|.|.+|.....+++..+.+|      .+.|.++++.++|.++++.+.|..++|||++.
T Consensus       252 G~~~vm~qNP-~NaVih~GhsnGtVSlWSP~skePLvKiLcH------~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~  324 (545)
T KOG1272|consen  252 GRTDVMKQNP-YNAVIHLGHSNGTVSLWSPNSKEPLVKILCH------RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRN  324 (545)
T ss_pred             CccchhhcCC-ccceEEEcCCCceEEecCCCCcchHHHHHhc------CCCcceEEECCCCcEEeecccccceeEeeecc
Confidence            4556677778 4577888899999999999999999999999      78999999999999999999999999999998


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      -..+.++.. ......+++|..|...+
T Consensus       325 ~~ql~t~~t-p~~a~~ls~SqkglLA~  350 (545)
T KOG1272|consen  325 FYQLHTYRT-PHPASNLSLSQKGLLAL  350 (545)
T ss_pred             ccccceeec-CCCccccccccccceee
Confidence            777766654 34566777776654433

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=9.1e-11  Score=73.04  Aligned_cols=102  Identities=19%  Similarity=0.142  Sum_probs=69.7

Q ss_pred             CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEE-
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIR-   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~-   78 (116)
                      ...+....|+| +++.|+..+.   +..|++||+.+++.... ...      .+....++|+|||+.++.+. .++... 
T Consensus       203 ~~~v~~p~wSP-DG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~------~g~~~~~~wSPDG~~La~~~~~~g~~~I  274 (429)
T PRK01742        203 SQPLMSPAWSP-DGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASF------RGHNGAPAFSPDGSRLAFASSKDGVLNI  274 (429)
T ss_pred             CCccccceEcC-CCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecC------CCccCceeECCCCCEEEEEEecCCcEEE
Confidence            45688999999 7788877653   34799999987754222 211      12344689999999777654 577554 


Q ss_pred             -EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 -FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                       +||+.+++.. .+..+...+....|+|||+.|+.++
T Consensus       275 y~~d~~~~~~~-~lt~~~~~~~~~~wSpDG~~i~f~s  310 (429)
T PRK01742        275 YVMGANGGTPS-QLTSGAGNNTEPSWSPDGQSILFTS  310 (429)
T ss_pred             EEEECCCCCeE-eeccCCCCcCCEEECCCCCEEEEEE
Confidence             4566666543 3444555678899999999877554

>KOG0307|consensus

Probab=99.33  E-value=7e-12  Score=82.66  Aligned_cols=102  Identities=16%  Similarity=0.260  Sum_probs=84.9

Q ss_pred             ceEEEEccCCCcEEEEeeCC---CeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEE
Q psy17133          7 PTSIDFVRDESTKMVTAFDN---SACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFD   81 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~---~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~   81 (116)
                      +..+.|+|++...++++++|   ..|.+||++. ..+++.+++|      ...|.++.|++.+ .++++++.|+.+.+|+
T Consensus       209 ~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H------~~GilslsWc~~D~~lllSsgkD~~ii~wN  282 (1049)
T KOG0307|consen  209 CSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGH------QRGILSLSWCPQDPRLLLSSGKDNRIICWN  282 (1049)
T ss_pred             eeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhccc------ccceeeeccCCCCchhhhcccCCCCeeEec
Confidence            66899999877888888754   4588999873 4577888888      6789999999876 7999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCc-EEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s  114 (116)
                      .++++.+..+.....++..+.|+|... .++.++
T Consensus       283 ~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~as  316 (1049)
T KOG0307|consen  283 PNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAAS  316 (1049)
T ss_pred             CCCceEeeecCCCCcceeeeeecCCCcchhhhhe
Confidence            999999999987778999999999665 444433

>KOG0974|consensus

Probab=99.33  E-value=6e-11  Score=77.83  Aligned_cols=105  Identities=14%  Similarity=0.113  Sum_probs=88.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|.+.|..+.|+- ++.++++.++|+.+++|++++.+... ..-+|      +..+...++.|+  .++++++|-+.++|
T Consensus       173 GHeG~iF~i~~s~-dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgH------saRvw~~~~~~n--~i~t~gedctcrvW  243 (967)
T KOG0974|consen  173 GHEGSIFSIVTSL-DGRYIASVSDDRSIRLWPIDSREVLGCTGFGH------SARVWACCFLPN--RIITVGEDCTCRVW  243 (967)
T ss_pred             ccCCceEEEEEcc-CCcEEEEEecCcceeeeecccccccCcccccc------cceeEEEEeccc--eeEEeccceEEEEE
Confidence            5899999999998 89999999999999999999887665 33345      788999999998  89999999999999


Q ss_pred             ECCCCeEEEEeeccc-ccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHL-DAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.. ++.+..+..|. ..+..++..+...+++|++.|
T Consensus       244 ~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~D  279 (967)
T KOG0974|consen  244 GVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGND  279 (967)
T ss_pred             ecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccC
Confidence            765 55555676664 468889988888888888765

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.33  E-value=3.6e-10  Score=68.62  Aligned_cols=107  Identities=24%  Similarity=0.415  Sum_probs=86.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeC-CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFD-NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~   79 (116)
                      .|...+..+.|+| ++..++.++. ++.+++|+...+..+..+.++      ...+.++.++|++. .+++++.|+.+++
T Consensus       153 ~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~d~~i~~  225 (466)
T COG2319         153 GHSESVTSLAFSP-DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH------TDPVSSLAFSPDGGLLIASGSSDGTIRL  225 (466)
T ss_pred             cCcccEEEEEECC-CCCEEEecCCCCCceEEEEcCCCceEEeeccC------CCceEEEEEcCCcceEEEEecCCCcEEE
Confidence            4677888999999 6677777775 999999999987788888877      67899999999987 5556688999999


Q ss_pred             EECCCCeEEE-EeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVH-SMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||...+.... .+..|.... ...|+|++..+++++.|
T Consensus       226 wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d  262 (466)
T COG2319         226 WDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSD  262 (466)
T ss_pred             EECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCC
Confidence            9988787777 576676654 33899999777766654

>KOG2919|consensus

Probab=99.32  E-value=3.1e-11  Score=70.92  Aligned_cols=107  Identities=16%  Similarity=0.263  Sum_probs=85.3

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~   82 (116)
                      .+-+.+++|+|.+...++.++-...+-||.-..+.++..+-+|      .+.|+.++|.++|..++++.. +-.|..||+
T Consensus       207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh------~gGvThL~~~edGn~lfsGaRk~dkIl~WDi  280 (406)
T KOG2919|consen  207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGH------GGGVTHLQWCEDGNKLFSGARKDDKILCWDI  280 (406)
T ss_pred             cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeeccc------CCCeeeEEeccCcCeecccccCCCeEEEEee
Confidence            4668899999988789999998888999988888888888888      789999999999998888765 779999999


Q ss_pred             CCC-eEEEEeecccc-cEEEEEE--CCCCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLD-AVTSLAV--DPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~-~v~~~~~--~~~~~~l~~~s~d  116 (116)
                      +.. ..+..+..|.. .-..|-|  .|++++|++|+.|
T Consensus       281 R~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~td  318 (406)
T KOG2919|consen  281 RYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTD  318 (406)
T ss_pred             hhccchhhhhhhhccCccceEEEecCCCCceeeccCCC
Confidence            754 44555555543 3334444  6899999998654

>KOG4328|consensus

Probab=99.31  E-value=4.7e-11  Score=72.60  Aligned_cols=107  Identities=18%  Similarity=0.135  Sum_probs=79.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE----EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV----RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      .|...|..++++|-...++++++.|+..+|||++.-+...    ....|      ...|.++.|+|++-.+++.+.|..|
T Consensus       320 lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~H------rrsV~sAyFSPs~gtl~TT~~D~~I  393 (498)
T KOG4328|consen  320 LHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPH------RRSVNSAYFSPSGGTLLTTCQDNEI  393 (498)
T ss_pred             hhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccc------cceeeeeEEcCCCCceEeeccCCce
Confidence            3667899999999888899999999999999998533222    22233      6789999999997669999999999


Q ss_pred             EEEECC----CCeEEEEeeccc-----ccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNV----SGKLVHSMVAHL-----DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~----~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++||..    .-+.+..+....     -......|.|+..++++|.
T Consensus       394 Rv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~  439 (498)
T KOG4328|consen  394 RVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGR  439 (498)
T ss_pred             EEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEec
Confidence            999973    233333333111     1244568999999888764

>KOG1523|consensus

Probab=99.31  E-value=9.2e-11  Score=68.70  Aligned_cols=105  Identities=13%  Similarity=0.156  Sum_probs=86.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .++|++.+|++ ++..++++-.+..+.||.....+   ...++..|      ...++.++|+|....|++++.|..-++|
T Consensus        10 ~~pitchAwn~-drt~iAv~~~~~evhiy~~~~~~~w~~~htls~H------d~~vtgvdWap~snrIvtcs~drnayVw   82 (361)
T KOG1523|consen   10 LEPITCHAWNS-DRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEH------DKIVTGVDWAPKSNRIVTCSHDRNAYVW   82 (361)
T ss_pred             cCceeeeeecC-CCceEEeccCCceEEEEEecCCCCceeceehhhh------CcceeEEeecCCCCceeEccCCCCcccc
Confidence            57899999999 88999999999999999987544   56677777      5689999999999999999999999999


Q ss_pred             EC-CCCeEE--EEeecccccEEEEEECCCCcEEEeeec
Q psy17133         81 DN-VSGKLV--HSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        81 ~~-~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .. ..++-.  -.+..+....+++.|+|.++.|++||.
T Consensus        83 ~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSg  120 (361)
T KOG1523|consen   83 TQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSG  120 (361)
T ss_pred             ccCCCCeeccceeEEEeccceeeEeecCcCceEEeccC
Confidence            98 444332  223346778999999999999998864

>KOG1523|consensus

Probab=99.31  E-value=3.9e-11  Score=70.21  Aligned_cols=107  Identities=17%  Similarity=0.177  Sum_probs=83.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEEC-CCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDL-ETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~-~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      |.+.|+.++|.| ..+.|++++.|+.-++|.. .+++  +...+.-.      +...+++.|+|.+..+++++....|.+
T Consensus        54 Hd~~vtgvdWap-~snrIvtcs~drnayVw~~~~~~~WkptlvLlRi------NrAAt~V~WsP~enkFAVgSgar~isV  126 (361)
T KOG1523|consen   54 HDKIVTGVDWAP-KSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRI------NRAATCVKWSPKENKFAVGSGARLISV  126 (361)
T ss_pred             hCcceeEEeecC-CCCceeEccCCCCccccccCCCCeeccceeEEEe------ccceeeEeecCcCceEEeccCccEEEE
Confidence            678899999999 8899999999999999998 4443  33333333      467899999999999999999999999


Q ss_pred             EECCCCeEE----EEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLV----HSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |=++.-.--    +.-+.+...|.++.|+|++-.|+.||.|
T Consensus       127 cy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D  167 (361)
T KOG1523|consen  127 CYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTD  167 (361)
T ss_pred             EEEecccceehhhhhCCccccceeeeeccCCcceecccccC
Confidence            876532211    1223456789999999999999998865

>KOG0322|consensus

Probab=99.30  E-value=8.9e-12  Score=71.29  Aligned_cols=70  Identities=17%  Similarity=0.244  Sum_probs=64.7

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      .+..+...| +++.+++++-|+++++|+..+.+++..++.|      ...+++++|+|+..+++.++.|..|.+|++
T Consensus       253 Gv~gvrIRp-D~KIlATAGWD~RiRVyswrtl~pLAVLkyH------sagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  253 GVSGVRIRP-DGKILATAGWDHRIRVYSWRTLNPLAVLKYH------SAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             CccceEEcc-CCcEEeecccCCcEEEEEeccCCchhhhhhh------hcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            456777888 7899999999999999999999999999999      678999999999999999999999999986

>KOG1063|consensus

Probab=99.29  E-value=2.2e-10  Score=72.80  Aligned_cols=114  Identities=16%  Similarity=0.225  Sum_probs=87.5

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.|+..|.++.|+| .+..|++++.|.++.+|...+.  --+......... +........-|+|++..+++-+.-|-.+
T Consensus       264 ~GHeDWV~sv~W~p-~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~g-g~a~GF~g~lw~~n~~~ii~~g~~Gg~h  341 (764)
T KOG1063|consen  264 MGHEDWVYSVWWHP-EGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVG-GSAGGFWGGLWSPNSNVIIAHGRTGGFH  341 (764)
T ss_pred             cCcccceEEEEEcc-chhhheecccCcceEEEecCCccceEEEEEEeeccc-ccccceeeEEEcCCCCEEEEecccCcEE
Confidence            67999999999999 7789999999999999987643  233222211100 0034578889999999999999999999


Q ss_pred             EEECCCCe---EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGK---LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|-.+...   ....+.+|.+.|+++.|+|.|.+|++.|.|
T Consensus       342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~D  382 (764)
T KOG1063|consen  342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLD  382 (764)
T ss_pred             EEeccCccceeeccccccccccceeeeecCCCCEEEEeccc
Confidence            99844332   223356899999999999999999999876

>KOG2445|consensus

Probab=99.27  E-value=5.6e-10  Score=65.28  Aligned_cols=107  Identities=13%  Similarity=0.151  Sum_probs=80.4

Q ss_pred             CCCCceEEEEccC--CCcEEEEeeCC-----CeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCC-CC---E
Q psy17133          3 YNGTPTSIDFVRD--ESTKMVTAFDN-----SACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPT-LP---L   67 (116)
Q Consensus         3 ~~~~v~~~~~~~~--~~~~l~~~~~~-----~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~---~   67 (116)
                      +..+..|+.|+|.  ...+|++|+.+     ++++||....+    ..+.++.++      ...|..++|.|+ |+   .
T Consensus       168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~------~dpI~di~wAPn~Gr~y~~  241 (361)
T KOG2445|consen  168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDH------TDPIRDISWAPNIGRSYHL  241 (361)
T ss_pred             ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCC------CCcceeeeeccccCCceee
Confidence            3456678999874  23578888754     47888876533    234556666      779999999997 54   7


Q ss_pred             EEEEeCCCeEEEEECCCC--------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         68 TITAHDDRHIRFFDNVSG--------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        68 ~~~~~~d~~i~~~~~~~~--------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.|| |+||.++..                    +.+..+..|.+.|..+.|+=.|..|++.+.|
T Consensus       242 lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdD  309 (361)
T KOG2445|consen  242 LAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDD  309 (361)
T ss_pred             EEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCC
Confidence            88999999 999998731                    2344466788999999999999999998876

>KOG0642|consensus

Probab=99.26  E-value=1.2e-10  Score=72.27  Aligned_cols=113  Identities=36%  Similarity=0.567  Sum_probs=91.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC--c-----------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG--V-----------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~--~-----------------------------   50 (116)
                      .|++.++.+.+++ ..+.|++++.|++++.|......+ ..|......  .                             
T Consensus       394 Ghtdavw~l~~s~-~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev  471 (577)
T KOG0642|consen  394 GHTDAVWLLALSS-TKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEV  471 (577)
T ss_pred             ccccceeeeeecc-cccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhh
Confidence            4788999999998 778999999999999998764433 111111000  0                             


Q ss_pred             ---------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         51 ---------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        51 ---------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                                     .....+..+.++|...+.+++.+|+.|+++|..+++.+.....|...++++++.|+|.+|++++.
T Consensus       472 ~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~  551 (577)
T KOG0642|consen  472 VSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSH  551 (577)
T ss_pred             hhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecC
Confidence                           11245677888999999999999999999999999999999889999999999999999999987


Q ss_pred             C
Q psy17133        116 Q  116 (116)
Q Consensus       116 d  116 (116)
                      |
T Consensus       552 d  552 (577)
T KOG0642|consen  552 D  552 (577)
T ss_pred             C
Confidence            6

>KOG2315|consensus

Probab=99.26  E-value=4.2e-10  Score=69.97  Aligned_cols=100  Identities=23%  Similarity=0.374  Sum_probs=80.0

Q ss_pred             CCCCceEEEEccCCCcEE--EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133          3 YNGTPTSIDFVRDESTKM--VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI   77 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l--~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i   77 (116)
                      ..|+|.++.|+| ++..+  +.|..-.++.|+|++ ++++..+..        +.-+.+.|+|.|.+++.++-   .|.+
T Consensus       269 k~GPVhdv~W~~-s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e--------gpRN~~~fnp~g~ii~lAGFGNL~G~m  338 (566)
T KOG2315|consen  269 KEGPVHDVTWSP-SGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE--------GPRNTAFFNPHGNIILLAGFGNLPGDM  338 (566)
T ss_pred             CCCCceEEEECC-CCCEEEEEEecccceEEEEcCC-CCEeEeCCC--------CCccceEECCCCCEEEEeecCCCCCce
Confidence            478999999999 55443  446678899999987 778887753        36789999999998888765   4789


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      -+||..+.+++..+...  .-+-+.|+|||++|+|++
T Consensus       339 EvwDv~n~K~i~~~~a~--~tt~~eW~PdGe~flTAT  373 (566)
T KOG2315|consen  339 EVWDVPNRKLIAKFKAA--NTTVFEWSPDGEYFLTAT  373 (566)
T ss_pred             EEEeccchhhccccccC--CceEEEEcCCCcEEEEEe
Confidence            99999998887777543  345689999999999875

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.26  E-value=9.2e-10  Score=68.75  Aligned_cols=103  Identities=17%  Similarity=0.130  Sum_probs=73.2

Q ss_pred             CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--e
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--H   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~   76 (116)
                      +.+.+....|+| +++.|+..+   .+..|++||+.+++.. .+...      .+.+....|+|||+.++ +.+.++  .
T Consensus       200 ~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~------~g~~~~~~~SPDG~~la~~~~~~g~~~  271 (435)
T PRK05137        200 GSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRE-LVGNF------PGMTFAPRFSPDGRKVVMSLSQGGNTD  271 (435)
T ss_pred             CCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEE-EeecC------CCcccCcEECCCCCEEEEEEecCCCce
Confidence            446788999999 778777665   2468999999877643 33333      34567889999998665 445444  4


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.+||+.+++..+ +..+........|+|||+.|+..+
T Consensus       272 Iy~~d~~~~~~~~-Lt~~~~~~~~~~~spDG~~i~f~s  308 (435)
T PRK05137        272 IYTMDLRSGTTTR-LTDSPAIDTSPSYSPDGSQIVFES  308 (435)
T ss_pred             EEEEECCCCceEE-ccCCCCccCceeEcCCCCEEEEEE
Confidence            8888988776544 444445566789999999888655

>KOG0321|consensus

Probab=99.25  E-value=4.7e-11  Score=75.22  Aligned_cols=103  Identities=19%  Similarity=0.224  Sum_probs=81.4

Q ss_pred             eEEEEcc--CCCcEEEEeeCCCeEEEEECCCCce------eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          8 TSIDFVR--DESTKMVTAFDNSACVLFDLETGKP------VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         8 ~~~~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .+..|++  ...+.|+.+.++|.|.++|....+.      +..+..|      .+.|..+.|.|-...|++++.|.++++
T Consensus        53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH------~nAifDl~wapge~~lVsasGDsT~r~  126 (720)
T KOG0321|consen   53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAH------KNAIFDLKWAPGESLLVSASGDSTIRP  126 (720)
T ss_pred             ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccc------cceeEeeccCCCceeEEEccCCceeee
Confidence            3455543  2446788899999999999874332      2344455      678999999997779999999999999


Q ss_pred             EECCCCeEEEE--eecccccEEEEEECCCCc-EEEeeecC
Q psy17133         80 FDNVSGKLVHS--MVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ||++++++...  +.+|...+.++||.|+.+ .|++|+.|
T Consensus       127 Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRD  166 (720)
T KOG0321|consen  127 WDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRD  166 (720)
T ss_pred             eeeccceeecceeecccccccchhhhccCCCcceeeccCC
Confidence            99999988766  789999999999999654 67788776

>KOG0974|consensus

Probab=99.25  E-value=2.1e-10  Score=75.34  Aligned_cols=96  Identities=16%  Similarity=0.155  Sum_probs=79.6

Q ss_pred             EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE-E
Q psy17133         12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH-S   90 (116)
Q Consensus        12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~-~   90 (116)
                      +++ +.=++++|+..+++.+|.....+.-..+.+|      .+.+..+.++.+|+++++.++|..+++|++++.+... .
T Consensus       141 ~s~-~~~~i~~gsv~~~iivW~~~~dn~p~~l~GH------eG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~  213 (967)
T KOG0974|consen  141 DSA-EELYIASGSVFGEIIVWKPHEDNKPIRLKGH------EGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCT  213 (967)
T ss_pred             ccC-cEEEEEeccccccEEEEeccccCCcceeccc------CCceEEEEEccCCcEEEEEecCcceeeeecccccccCcc
Confidence            344 4456778888899999998733333357788      7899999999999999999999999999999988876 5


Q ss_pred             eecccccEEEEEECCCCcEEEeeecC
Q psy17133         91 MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        91 ~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .-+|.+++..++|.|.  .++|++.|
T Consensus       214 ~fgHsaRvw~~~~~~n--~i~t~ged  237 (967)
T KOG0974|consen  214 GFGHSARVWACCFLPN--RIITVGED  237 (967)
T ss_pred             cccccceeEEEEeccc--eeEEeccc
Confidence            6679999999999999  88888876

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=1.2e-09  Score=68.12  Aligned_cols=102  Identities=15%  Similarity=0.026  Sum_probs=70.7

Q ss_pred             CCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCC--eEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDR--HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~--~i~   78 (116)
                      +.+....|+| +++.|+..+   .+..+++|++.+++..... ..      .+......|+|||+.++.. ..++  .|+
T Consensus       199 ~~~~~p~wSP-DG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~------~~~~~~~~~SPDG~~La~~~~~~g~~~I~  270 (429)
T PRK03629        199 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVA-SF------PRHNGAPAFSPDGSKLAFALSKTGSLNLY  270 (429)
T ss_pred             CceeeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CC------CCCcCCeEECCCCCEEEEEEcCCCCcEEE
Confidence            4678899999 778777643   2457999999877543322 11      1234568999999977754 3344  599


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +||+++++..+... +...+....|+|||+.|+..+.
T Consensus       271 ~~d~~tg~~~~lt~-~~~~~~~~~wSPDG~~I~f~s~  306 (429)
T PRK03629        271 VMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAYTSD  306 (429)
T ss_pred             EEECCCCCEEEccC-CCCCcCceEECCCCCEEEEEeC
Confidence            99998887655443 3445678999999998876553

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.23  E-value=3.3e-09  Score=64.44  Aligned_cols=106  Identities=22%  Similarity=0.345  Sum_probs=81.6

Q ss_pred             CCCCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |...+.++.|+| ++. .+++++.++.+++||...+.... .+.++      .... ...|+|++..+++++.++.+++|
T Consensus       197 ~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~d~~~~~~  268 (466)
T COG2319         197 HTDPVSSLAFSP-DGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGH------SDSV-VSSFSPDGSLLASGSSDGTIRLW  268 (466)
T ss_pred             CCCceEEEEEcC-CcceEEEEecCCCcEEEEECCCCcEEeeecCCC------Ccce-eEeECCCCCEEEEecCCCcEEEe
Confidence            567899999998 666 55555889999999888676666 56666      3333 22799999888899999999999


Q ss_pred             ECCCCeE-EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKL-VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +...... +..+..|...+..+.|.|++..+++++.|
T Consensus       269 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d  305 (466)
T COG2319         269 DLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSD  305 (466)
T ss_pred             eecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCC
Confidence            9986654 44445677889999999988888876654

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.23  E-value=2.2e-09  Score=65.75  Aligned_cols=91  Identities=23%  Similarity=0.343  Sum_probs=69.2

Q ss_pred             cEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         18 TKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        18 ~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      +++ ++-..+++|.+.|..+.+.+.+++..      ......+.++||+++++..+.|+.|.++|+.+.+.+..+... .
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~------~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-~   78 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTG------GAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG-G   78 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-S------TTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-S
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCC------CCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-C
Confidence            455 44557899999999999999999865      223455778999999999999999999999999999888743 4


Q ss_pred             cEEEEEECCCCcEEEeeec
Q psy17133         97 AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s~  115 (116)
                      ...++++++||+++++++.
T Consensus        79 ~~~~i~~s~DG~~~~v~n~   97 (369)
T PF02239_consen   79 NPRGIAVSPDGKYVYVANY   97 (369)
T ss_dssp             EEEEEEE--TTTEEEEEEE
T ss_pred             CcceEEEcCCCCEEEEEec
Confidence            5788999999999998764

...

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.22  E-value=1.5e-10  Score=48.44  Aligned_cols=38  Identities=24%  Similarity=0.335  Sum_probs=34.9

Q ss_pred             ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133         38 KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +++..+.+|      ...|.+++|+|++..+++++.|+.|++||
T Consensus         2 ~~~~~~~~h------~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGH------SSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESS------SSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCC------CCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            567788888      78999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG2139|consensus

Probab=99.21  E-value=1.2e-09  Score=65.25  Aligned_cols=112  Identities=11%  Similarity=0.176  Sum_probs=77.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-C---ceeEEEecCCc-Cc--CCCCceeEEEEcCCCCEEEEEeC-CC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-G---KPVVRIDSSQF-GV--SGGGGINRVVCHPTLPLTITAHD-DR   75 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~---~~~~~~~~~~~-~~--~~~~~i~~~~~~~~~~~~~~~~~-d~   75 (116)
                      ...|++++|.|.....++.+... -|.+|.... .   ..+.-...+.. ..  .....|+++.|.+||..+++++- +.
T Consensus       140 QrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gss  218 (445)
T KOG2139|consen  140 QRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSS  218 (445)
T ss_pred             hcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcc
Confidence            35689999999777777777754 588887652 1   11110000000 00  00257999999999998888765 78


Q ss_pred             eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|.+||..++..+.......+.++-+.|+||+.+|+.++-|
T Consensus       219 si~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~d  259 (445)
T KOG2139|consen  219 SIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCD  259 (445)
T ss_pred             eEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEeccc
Confidence            89999999887766554345678899999999999877644

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.21  E-value=1e-09  Score=68.39  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=69.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~   78 (116)
                      +.+.+.+..|+| +++.|+..+.   ...+++||+.+++... +...      .+......|+|||+.++ +.+.++...
T Consensus       194 ~~~~v~~p~wSP-DG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~------~g~~~~~~~SPDG~~la~~~~~~g~~~  265 (427)
T PRK02889        194 SPEPIISPAWSP-DGTKLAYVSFESKKPVVYVHDLATGRRRV-VANF------KGSNSAPAWSPDGRTLAVALSRDGNSQ  265 (427)
T ss_pred             CCCCcccceEcC-CCCEEEEEEccCCCcEEEEEECCCCCEEE-eecC------CCCccceEECCCCCEEEEEEccCCCce
Confidence            345678899999 7787776653   3469999998776533 3322      23456889999998775 456676655


Q ss_pred             EE--ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FF--DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +|  |...+. ...+..+........|+|||+.|+..+
T Consensus       266 Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s  302 (427)
T PRK02889        266 IYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTS  302 (427)
T ss_pred             EEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEe
Confidence            55  555444 344444444556788999999887654

>KOG0649|consensus

Probab=99.20  E-value=1.1e-09  Score=62.51  Aligned_cols=110  Identities=17%  Similarity=0.135  Sum_probs=79.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce------eEEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP------VVRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      |.++++.++|..   .+|++++ ||.|+-|..+....      +-+.+. .......-..|+++.+.|...-++.++.|+
T Consensus        61 hdgpiy~~~f~d---~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~  136 (325)
T KOG0649|consen   61 HDGPIYYLAFHD---DFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDG  136 (325)
T ss_pred             cCCCeeeeeeeh---hheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCe
Confidence            789999999973   6777777 49999887653211      111111 110011123688999999877777777999


Q ss_pred             eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++.||+++|+..+.+++|.+-+.+++--.....+++|+.|
T Consensus       137 ~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~ED  177 (325)
T KOG0649|consen  137 VIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAED  177 (325)
T ss_pred             EEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCC
Confidence            99999999999999999999999999874444556677765

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.20  E-value=1.6e-09  Score=67.61  Aligned_cols=102  Identities=22%  Similarity=0.130  Sum_probs=70.7

Q ss_pred             CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--eE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--HI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~i   77 (116)
                      ...+....|+| +++.|+..+.   ...+++|++.+++.. .+...      .+......|+|+|+.++ +.+.++  .|
T Consensus       203 ~~~v~~p~wSp-Dg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~------~g~~~~~~~SpDG~~l~~~~s~~g~~~I  274 (433)
T PRK04922        203 AEPILSPAWSP-DGKKLAYVSFERGRSAIYVQDLATGQRE-LVASF------RGINGAPSFSPDGRRLALTLSRDGNPEI  274 (433)
T ss_pred             CCccccccCCC-CCCEEEEEecCCCCcEEEEEECCCCCEE-EeccC------CCCccCceECCCCCEEEEEEeCCCCceE
Confidence            34577889999 7787777653   356999999877643 23222      23345789999998665 444444  69


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++||+.+++... +..+.......+|+|||++|+..+
T Consensus       275 y~~d~~~g~~~~-lt~~~~~~~~~~~spDG~~l~f~s  310 (433)
T PRK04922        275 YVMDLGSRQLTR-LTNHFGIDTEPTWAPDGKSIYFTS  310 (433)
T ss_pred             EEEECCCCCeEE-CccCCCCccceEECCCCCEEEEEE
Confidence            999998877543 443444456789999999888665

>KOG1524|consensus

Probab=99.19  E-value=2.7e-10  Score=71.04  Aligned_cols=92  Identities=14%  Similarity=0.166  Sum_probs=71.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.|-|.+++|++ ..+.+++|++|-+.++||.. |+.+..-..|      ...|++++|+|+ +.++.++- ++++   
T Consensus       184 AHDGiiL~~~W~~-~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~------ey~ITSva~npd-~~~~v~S~-nt~R---  250 (737)
T KOG1524|consen  184 AHDGLVLSLSWST-QSNIIASGGEDFRFKIWDAQ-GANLFTSAAE------EYAITSVAFNPE-KDYLLWSY-NTAR---  250 (737)
T ss_pred             ccCcEEEEeecCc-cccceeecCCceeEEeeccc-CcccccCChh------ccceeeeeeccc-cceeeeee-eeee---
Confidence            3789999999999 78999999999999999976 7777777777      568999999999 54444431 2222   


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                              .-+...+.|..++|++||..++.|+
T Consensus       251 --------~~~p~~GSifnlsWS~DGTQ~a~gt  275 (737)
T KOG1524|consen  251 --------FSSPRVGSIFNLSWSADGTQATCGT  275 (737)
T ss_pred             --------ecCCCccceEEEEEcCCCceeeccc
Confidence                    1123457899999999999988665

>KOG3881|consensus

Probab=99.18  E-value=2.5e-10  Score=68.33  Aligned_cols=95  Identities=23%  Similarity=0.331  Sum_probs=79.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +.+++++...| ++++++++...+.+..+|.+.++.... +++-      .+.+.++..+|..+++++++-|.+++|+|+
T Consensus       247 E~~is~~~l~p-~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~------tGsirsih~hp~~~~las~GLDRyvRIhD~  319 (412)
T KOG3881|consen  247 ENPISSTGLTP-SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI------TGSIRSIHCHPTHPVLASCGLDRYVRIHDI  319 (412)
T ss_pred             cCcceeeeecC-CCcEEEEecccchhheecccCceeeccccCCc------cCCcceEEEcCCCceEEeeccceeEEEeec
Confidence            45678888899 889999999999999999998887766 6666      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQ  106 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~  106 (116)
                      ++.+++.... -...++.+.+.++
T Consensus       320 ktrkll~kvY-vKs~lt~il~~~~  342 (412)
T KOG3881|consen  320 KTRKLLHKVY-VKSRLTFILLRDD  342 (412)
T ss_pred             ccchhhhhhh-hhccccEEEecCC
Confidence            9977776654 2345666666554

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.18  E-value=5.5e-09  Score=63.08  Aligned_cols=108  Identities=14%  Similarity=0.146  Sum_probs=69.4

Q ss_pred             CceEEEEccCCCcEEEEeeC-CCeEEEEECCC--Cc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFD-NSACVLFDLET--GK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~-~~~v~i~~~~~--~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~   79 (116)
                      .+..+.|+| ++++++++.. ++.|.+|++..  ++  .+..+...............+.++|++++++++.. ++.|.+
T Consensus       176 ~p~~~~~~p-dg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v  254 (330)
T PRK11028        176 GPRHMVFHP-NQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISV  254 (330)
T ss_pred             CCceEEECC-CCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEE
Confidence            356789999 7788877765 89999999873  32  22233211000000122346889999998888754 789999


Q ss_pred             EECCCCe----EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         80 FDNVSGK----LVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++....    .+..... ......+.++|+|++|++++.
T Consensus       255 ~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~  293 (330)
T PRK11028        255 FSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQ  293 (330)
T ss_pred             EEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEc
Confidence            9985432    2222221 124568899999999987653

>KOG0650|consensus

Probab=99.18  E-value=4.6e-11  Score=74.93  Aligned_cols=105  Identities=20%  Similarity=0.236  Sum_probs=88.8

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      -|.|.++.|+| ...++++++. ..|++||+..+..++.+...      ...+.+++++|.|.-++.++.|+.+..+|+.
T Consensus       566 kG~vq~v~FHP-s~p~lfVaTq-~~vRiYdL~kqelvKkL~tg------~kwiS~msihp~GDnli~gs~d~k~~WfDld  637 (733)
T KOG0650|consen  566 KGLVQRVKFHP-SKPYLFVATQ-RSVRIYDLSKQELVKKLLTG------SKWISSMSIHPNGDNLILGSYDKKMCWFDLD  637 (733)
T ss_pred             CCceeEEEecC-CCceEEEEec-cceEEEehhHHHHHHHHhcC------CeeeeeeeecCCCCeEEEecCCCeeEEEEcc
Confidence            46789999999 6778887774 57999999887777777655      4568999999999999999999999999997


Q ss_pred             CC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         84 SG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        84 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      -+ +..+.+..|...+++++|++.-..|++++.|
T Consensus       638 lsskPyk~lr~H~~avr~Va~H~ryPLfas~sdD  671 (733)
T KOG0650|consen  638 LSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDD  671 (733)
T ss_pred             cCcchhHHhhhhhhhhhhhhhccccceeeeecCC
Confidence            43 5566777889999999999999999999876

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.17  E-value=1.4e-08  Score=62.27  Aligned_cols=98  Identities=16%  Similarity=0.245  Sum_probs=69.9

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECCCCe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNVSGK   86 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~   86 (116)
                      ..+.|+| +++++++++.++.+.++|+.+++.+.+++..       .....+++++||+++++++ ..+.+.++|.++.+
T Consensus        40 ~~~~~s~-Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G-------~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle  111 (369)
T PF02239_consen   40 AGLKFSP-DGRYLYVANRDGTVSVIDLATGKVVATIKVG-------GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLE  111 (369)
T ss_dssp             EEEE-TT--SSEEEEEETTSEEEEEETTSSSEEEEEE-S-------SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--
T ss_pred             eEEEecC-CCCEEEEEcCCCeEEEEECCcccEEEEEecC-------CCcceEEEcCCCCEEEEEecCCCceeEecccccc
Confidence            3467889 7888888899999999999999999998766       3578899999999887665 68999999999999


Q ss_pred             EEEEeecc-------cccEEEEEECCCCcEEEee
Q psy17133         87 LVHSMVAH-------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        87 ~~~~~~~~-------~~~v~~~~~~~~~~~l~~~  113 (116)
                      .++.+...       ..++..+..+|....++..
T Consensus       112 ~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~  145 (369)
T PF02239_consen  112 PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVN  145 (369)
T ss_dssp             EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEE
T ss_pred             ceeecccccccccccCCCceeEEecCCCCEEEEE
Confidence            88876532       2356677778877755443

...

>KOG3914|consensus

Probab=99.17  E-value=1.3e-10  Score=69.51  Aligned_cols=84  Identities=12%  Similarity=0.115  Sum_probs=68.1

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      |.|.+.+++++|+| ++++|+++..|..|++-.......+..| .+|      ...|..++.-++. .|++++.|+++++
T Consensus       148 lGhvSml~dVavS~-D~~~IitaDRDEkIRvs~ypa~f~IesfclGH------~eFVS~isl~~~~-~LlS~sGD~tlr~  219 (390)
T KOG3914|consen  148 LGHVSMLLDVAVSP-DDQFIITADRDEKIRVSRYPATFVIESFCLGH------KEFVSTISLTDNY-LLLSGSGDKTLRL  219 (390)
T ss_pred             hhhhhhhheeeecC-CCCEEEEecCCceEEEEecCcccchhhhcccc------HhheeeeeeccCc-eeeecCCCCcEEE
Confidence            46788899999999 7799999999999999777655455554 356      6678888887654 5899999999999


Q ss_pred             EECCCCeEEEEee
Q psy17133         80 FDNVSGKLVHSMV   92 (116)
Q Consensus        80 ~~~~~~~~~~~~~   92 (116)
                      ||+.+|+.+..+.
T Consensus       220 Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  220 WDITSGKLLDTCD  232 (390)
T ss_pred             EecccCCcccccc
Confidence            9999998776553

>KOG1587|consensus

Probab=99.13  E-value=7.3e-10  Score=70.41  Aligned_cols=108  Identities=18%  Similarity=0.219  Sum_probs=80.8

Q ss_pred             CCCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEE
Q psy17133          1 MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIR   78 (116)
Q Consensus         1 ~~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~   78 (116)
                      +.|.+.|.++.++|-....+++++ |-.++||... ...++..+..+      ...+++++|+|..+ .++++..+|.+.
T Consensus       395 ~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~------~~~v~~vaWSptrpavF~~~d~~G~l~  467 (555)
T KOG1587|consen  395 ITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSS------PDYVTDVAWSPTRPAVFATVDGDGNLD  467 (555)
T ss_pred             cccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhc------cceeeeeEEcCcCceEEEEEcCCCcee
Confidence            468899999999996555555555 8899999987 56677777766      45699999999865 667788899999


Q ss_pred             EEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +||+...  +..............+.|++.|+.|+.|..
T Consensus       468 iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~  506 (555)
T KOG1587|consen  468 IWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDA  506 (555)
T ss_pred             hhhhhccccCCcccccccccccceeecCCCCcEEEEecC
Confidence            9998643  233333333445677788888999988753

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.13  E-value=1.1e-08  Score=63.93  Aligned_cols=101  Identities=11%  Similarity=0.101  Sum_probs=66.8

Q ss_pred             CCceEEEEccCCCcEEEEe-eCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEE
Q psy17133          5 GTPTSIDFVRDESTKMVTA-FDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~-~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~   78 (116)
                      +.+....|+| +++.|+.. ..+  ..|++||+.+++... +...      ...+....|+|+++.++..+.+ +  .|.
T Consensus       243 ~~~~~~~~SP-DG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~------~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy  314 (429)
T PRK03629        243 RHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDG------RSNNTEPTWFPDSQNLAYTSDQAGRPQVY  314 (429)
T ss_pred             CCcCCeEECC-CCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCC------CCCcCceEECCCCCEEEEEeCCCCCceEE
Confidence            3345689999 77777654 333  368899998776543 3332      2356789999999988766654 3  455


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+++.+++... +...........|+|||++|+..+
T Consensus       315 ~~d~~~g~~~~-lt~~~~~~~~~~~SpDG~~Ia~~~  349 (429)
T PRK03629        315 KVNINGGAPQR-ITWEGSQNQDADVSSDGKFMVMVS  349 (429)
T ss_pred             EEECCCCCeEE-eecCCCCccCEEECCCCCEEEEEE
Confidence            66777665433 332333456788999999987654

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.11  E-value=1e-08  Score=63.47  Aligned_cols=103  Identities=22%  Similarity=0.235  Sum_probs=80.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC----eEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR----HIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~----~i~   78 (116)
                      ..+.|.++..+| +|++++++....++.+.|+++++....-+..      .+-|+.+.|+|+++++|.+-.++    .|+
T Consensus       400 ~lg~I~av~vs~-dGK~~vvaNdr~el~vididngnv~~idkS~------~~lItdf~~~~nsr~iAYafP~gy~tq~Ik  472 (668)
T COG4946         400 DLGNIEAVKVSP-DGKKVVVANDRFELWVIDIDNGNVRLIDKSE------YGLITDFDWHPNSRWIAYAFPEGYYTQSIK  472 (668)
T ss_pred             CccceEEEEEcC-CCcEEEEEcCceEEEEEEecCCCeeEecccc------cceeEEEEEcCCceeEEEecCcceeeeeEE
Confidence            457889999999 8899999998999999999988754433333      46799999999999999877665    599


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++|+.+++...... ..+.-.+-+|.|++++|.--
T Consensus       473 lydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYfL  506 (668)
T COG4946         473 LYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYFL  506 (668)
T ss_pred             EEecCCCeEEEecC-CcccccCcccCCCCcEEEEE
Confidence            99999887765543 33344567899999987643

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.11  E-value=2.3e-08  Score=62.04  Aligned_cols=103  Identities=17%  Similarity=0.211  Sum_probs=81.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCC-eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNS-ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~-~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +.+.|.-..+.. +++.++.|..++ .+-++|..+++ +..+...      -+.|..+..+|+|+.++.+.....+.+.|
T Consensus       358 ~~~~VrY~r~~~-~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~------lg~I~av~vs~dGK~~vvaNdr~el~vid  429 (668)
T COG4946         358 KKGGVRYRRIQV-DPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKD------LGNIEAVKVSPDGKKVVVANDRFELWVID  429 (668)
T ss_pred             CCCceEEEEEcc-CCcceEEeccCCceEEEEecCCce-EEEeeCC------ccceEEEEEcCCCcEEEEEcCceEEEEEE
Confidence            445555556655 445677777776 89999998664 4555555      46799999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +.++.....-+...+.|+.+.|+|+++++|-+
T Consensus       430 idngnv~~idkS~~~lItdf~~~~nsr~iAYa  461 (668)
T COG4946         430 IDNGNVRLIDKSEYGLITDFDWHPNSRWIAYA  461 (668)
T ss_pred             ecCCCeeEecccccceeEEEEEcCCceeEEEe
Confidence            99998876666677889999999999999743

>KOG4497|consensus

Probab=99.11  E-value=6.7e-09  Score=61.63  Aligned_cols=103  Identities=16%  Similarity=0.194  Sum_probs=76.2

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVS   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~   84 (116)
                      .|.-+.|..+....+.....++.|.+|++...+--..+...      +..+..++|+|+|+.+ .+..-+-.|.+|.+.+
T Consensus        50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg------~agls~~~WSPdgrhiL~tseF~lriTVWSL~t  123 (447)
T KOG4497|consen   50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEG------QAGLSSISWSPDGRHILLTSEFDLRITVWSLNT  123 (447)
T ss_pred             HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccC------CCcceeeeECCCcceEeeeecceeEEEEEEecc
Confidence            45667888744345555678999999999877666666655      5689999999999755 4555689999999976


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+... +...+..+..++|+|||++.+..++
T Consensus       124 ~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sR  153 (447)
T KOG4497|consen  124 QKGYL-LPHPKTNVKGYAFHPDGQFCAILSR  153 (447)
T ss_pred             ceeEE-ecccccCceeEEECCCCceeeeeec
Confidence            65543 3323456789999999999887653

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.10  E-value=1.2e-08  Score=63.64  Aligned_cols=102  Identities=15%  Similarity=0.077  Sum_probs=69.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--eE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--HI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~i   77 (116)
                      ...+....|+| +++.|+..+.   ...|++|++.+++... +...      .+......|+|+|+.++ +...++  .|
T Consensus       198 ~~~~~~p~wSp-DG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~------~g~~~~~~~SpDG~~la~~~~~~g~~~I  269 (430)
T PRK00178        198 REPILSPRWSP-DGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNF------EGLNGAPAWSPDGSKLAFVLSKDGNPEI  269 (430)
T ss_pred             CCceeeeeECC-CCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCC------CCCcCCeEECCCCCEEEEEEccCCCceE
Confidence            34567889999 7787766543   2468999998776433 3222      23355689999998776 444444  68


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .++|+.+++... +..+........|+|||+.|+..+
T Consensus       270 y~~d~~~~~~~~-lt~~~~~~~~~~~spDg~~i~f~s  305 (430)
T PRK00178        270 YVMDLASRQLSR-VTNHPAIDTEPFWGKDGRTLYFTS  305 (430)
T ss_pred             EEEECCCCCeEE-cccCCCCcCCeEECCCCCEEEEEE
Confidence            888998876544 433444556788999999877544

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.10  E-value=2.5e-08  Score=60.30  Aligned_cols=103  Identities=14%  Similarity=0.275  Sum_probs=67.9

Q ss_pred             CceEEEEccCCCcEEEEe-eCCCeEEEEECCCCceeEE-----EecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEE
Q psy17133          6 TPTSIDFVRDESTKMVTA-FDNSACVLFDLETGKPVVR-----IDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~   78 (116)
                      .+..+.++| ++++++++ ..++.|.+||+.+...+..     .....     ......+.|+|+++++++... ++.|.
T Consensus       127 ~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~-----g~~p~~~~~~pdg~~lyv~~~~~~~v~  200 (330)
T PRK11028        127 GCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVE-----GAGPRHMVFHPNQQYAYCVNELNSSVD  200 (330)
T ss_pred             cccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCC-----CCCCceEEECCCCCEEEEEecCCCEEE
Confidence            356778999 67777554 4678999999976332211     11111     234678899999999988776 89999


Q ss_pred             EEECCC--Ce--EEEEeecc------cccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVS--GK--LVHSMVAH------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~--~~--~~~~~~~~------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +|++..  ++  .+..+...      ......+.++|++++++++.
T Consensus       201 v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~  246 (330)
T PRK11028        201 VWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACD  246 (330)
T ss_pred             EEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEec
Confidence            999973  33  23333211      11234688999999998764

>KOG1963|consensus

Probab=99.08  E-value=9.9e-09  Score=66.75  Aligned_cols=66  Identities=23%  Similarity=0.291  Sum_probs=52.9

Q ss_pred             CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC--C--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS--G--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|.-.+++.+++|++++++++..||.|.+|.--.  .  ...+.+..|...|.+++|+++|.+|++|++.
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E  272 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGRE  272 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccc
Confidence            3444468899999999999999999999996322  2  2234566788899999999999999999863

>KOG1188|consensus

Probab=99.08  E-value=2.3e-09  Score=63.46  Aligned_cols=91  Identities=19%  Similarity=0.204  Sum_probs=68.5

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEEECCCCeEEEE--eec
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFFDNVSGKLVHS--MVA   93 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~--~~~   93 (116)
                      ..++++-.++.|++||..+++.+..|+++      +..++.++|..  ....+.+++.||+|++||++.......  +.+
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~------~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~  114 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGP------PATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ  114 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCC------CCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence            45777888999999999999999999998      66788888876  355889999999999999986544333  333


Q ss_pred             cc-ccEEEEEECCCCcEEEeee
Q psy17133         94 HL-DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        94 ~~-~~v~~~~~~~~~~~l~~~s  114 (116)
                      +. .+..+++.+-.++.+++|.
T Consensus       115 ~~~~~f~~ld~nck~~ii~~Gt  136 (376)
T KOG1188|consen  115 QSGTPFICLDLNCKKNIIACGT  136 (376)
T ss_pred             CCCCcceEeeccCcCCeEEecc
Confidence            43 3455565555677777664

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.06  E-value=1.6e-08  Score=63.48  Aligned_cols=101  Identities=16%  Similarity=0.069  Sum_probs=67.4

Q ss_pred             CCceEEEEccCCCcEEEEeeC-C--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCC--eEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD-N--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDR--HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~-~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~--~i~   78 (116)
                      ..+....|+| +++.|+..+. +  ..|+++|+.+++... +...      .+......|+||++.++. ...++  .|.
T Consensus       218 ~~~~~p~wSP-DG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~------~g~~~~~~wSPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        218 EPLMSPAWSP-DGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSF------PGINGAPRFSPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             CcccCceECC-CCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCC------CCCcCCeeECCCCCEEEEEEeCCCCeEEE
Confidence            4567889999 7777776542 2  368889998776432 2221      123456889999997754 45555  488


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++|+.+++... +..+.......+|+||+++|+..+
T Consensus       290 ~~dl~tg~~~~-lt~~~~~~~~p~wSpDG~~I~f~s  324 (448)
T PRK04792        290 VVDIATKALTR-ITRHRAIDTEPSWHPDGKSLIFTS  324 (448)
T ss_pred             EEECCCCCeEE-CccCCCCccceEECCCCCEEEEEE
Confidence            88988776544 333444567789999999887654

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=2.7e-08  Score=62.32  Aligned_cols=102  Identities=14%  Similarity=0.129  Sum_probs=68.6

Q ss_pred             CCCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeE
Q psy17133          4 NGTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i   77 (116)
                      .+.+....|+| +++.|+ +.+.+  ..|++||+.+++. ..+..+      ........|+||++.++..+. +  ..|
T Consensus       245 ~g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~------~~~~~~~~~spDG~~i~f~s~~~g~~~I  316 (435)
T PRK05137        245 PGMTFAPRFSP-DGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDS------PAIDTSPSYSPDGSQIVFESDRSGSPQL  316 (435)
T ss_pred             CCcccCcEECC-CCCEEEEEEecCCCceEEEEECCCCce-EEccCC------CCccCceeEcCCCCEEEEEECCCCCCeE
Confidence            34567789999 677664 44444  4577889886654 444444      334567899999998877654 2  368


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .++|+..++... +......+....|+|+|+.|+..+
T Consensus       317 y~~d~~g~~~~~-lt~~~~~~~~~~~SpdG~~ia~~~  352 (435)
T PRK05137        317 YVMNADGSNPRR-ISFGGGRYSTPVWSPRGDLIAFTK  352 (435)
T ss_pred             EEEECCCCCeEE-eecCCCcccCeEECCCCCEEEEEE
Confidence            888987665544 332344566788999999987654

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.05  E-value=2.4e-08  Score=61.99  Aligned_cols=101  Identities=17%  Similarity=0.064  Sum_probs=68.2

Q ss_pred             CCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCC--CeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDD--RHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d--~~i~   78 (116)
                      ..+....|+| ++++++....   ...+++|++.+++..... ..      .+......|+|+++.++. ...+  ..|+
T Consensus       190 ~~~~~p~~Sp-dg~~la~~~~~~~~~~i~v~d~~~g~~~~~~-~~------~~~~~~~~~spDg~~l~~~~~~~~~~~i~  261 (417)
T TIGR02800       190 EPILSPAWSP-DGQKLAYVSFESGKPEIYVQDLATGQREKVA-SF------PGMNGAPAFSPDGSKLAVSLSKDGNPDIY  261 (417)
T ss_pred             CceecccCCC-CCCEEEEEEcCCCCcEEEEEECCCCCEEEee-cC------CCCccceEECCCCCEEEEEECCCCCccEE
Confidence            3467788999 7788776653   257999999877543322 22      234567899999986654 4433  4688


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +|++.++.... +..+........|+|+++.|+..+
T Consensus       262 ~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s  296 (417)
T TIGR02800       262 VMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTS  296 (417)
T ss_pred             EEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEE
Confidence            99998776543 333334445678999999887654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.00  E-value=1.3e-08  Score=63.60  Aligned_cols=99  Identities=12%  Similarity=0.154  Sum_probs=64.7

Q ss_pred             CCCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ...+....|+| +++.++..+ .++...+|++.. +.....+ .+      ..  ....|+|+++.++..+.++ +.+||
T Consensus       291 ~~~~~~~~wSp-DG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~------~~--~~~~~SpDG~~ia~~~~~~-i~~~D  359 (429)
T PRK01742        291 AGNNTEPSWSP-DGQSILFTSDRSGSPQVYRMSASGGGASLV-GG------RG--YSAQISADGKTLVMINGDN-VVKQD  359 (429)
T ss_pred             CCCcCCEEECC-CCCEEEEEECCCCCceEEEEECCCCCeEEe-cC------CC--CCccCCCCCCEEEEEcCCC-EEEEE
Confidence            34567899999 677666544 566777776542 2222333 23      22  3467999999988877655 55599


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+++........  ....+.|+|+|++|+.++.
T Consensus       360 l~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~  391 (429)
T PRK01742        360 LTSGSTEVLSSTF--LDESPSISPNGIMIIYSST  391 (429)
T ss_pred             CCCCCeEEecCCC--CCCCceECCCCCEEEEEEc
Confidence            9888765333222  2356789999999988764

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=99.00  E-value=1e-08  Score=64.41  Aligned_cols=74  Identities=12%  Similarity=0.169  Sum_probs=60.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +..+.+.+++++| +.+.++.|..||.|.+||...+..  .+...      .-.++.++|+|+|..+++++..|.+.+||
T Consensus       257 pL~s~v~~ca~sp-~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka------~~~P~~iaWHp~gai~~V~s~qGelQ~FD  327 (545)
T PF11768_consen  257 PLPSQVICCARSP-SEDKLVLGCEDGSIILYDTTRGVT--LLAKA------EFIPTLIAWHPDGAIFVVGSEQGELQCFD  327 (545)
T ss_pred             ecCCcceEEecCc-ccceEEEEecCCeEEEEEcCCCee--eeeee------cccceEEEEcCCCcEEEEEcCCceEEEEE
Confidence            3567899999999 779999999999999999875532  22222      23578999999999999999999999999


Q ss_pred             CCC
Q psy17133         82 NVS   84 (116)
Q Consensus        82 ~~~   84 (116)
                      +.-
T Consensus       328 ~AL  330 (545)
T PF11768_consen  328 MAL  330 (545)
T ss_pred             eec
Confidence            764

>KOG4227|consensus

Probab=99.00  E-value=5.3e-08  Score=59.25  Aligned_cols=107  Identities=16%  Similarity=0.172  Sum_probs=82.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|.. +..++.+|..+++|..-|+++.+.+..+.....    .+.|..+..+|....+++.+.++.|.+||+
T Consensus       104 H~SNIF~L~F~~-~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~----~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~  178 (609)
T KOG4227|consen  104 HRSNIFSLEFDL-ENRFLYSGERWGTVIKHDIETKQSIYVANENNN----RGDVYHMDQHPTDNTLIVVTRAKLVSFIDN  178 (609)
T ss_pred             cccceEEEEEcc-CCeeEecCCCcceeEeeecccceeeeeecccCc----ccceeecccCCCCceEEEEecCceEEEEec
Confidence            557899999998 778999999999999999998887777654432    568999999999999999999999999998


Q ss_pred             CCCe-E--EEEeecccccEEEEEECCCCc-EEEeee
Q psy17133         83 VSGK-L--VHSMVAHLDAVTSLAVDPQGL-YILSGT  114 (116)
Q Consensus        83 ~~~~-~--~~~~~~~~~~v~~~~~~~~~~-~l~~~s  114 (116)
                      +... .  +............+.|+|... .|++++
T Consensus       179 Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~  214 (609)
T KOG4227|consen  179 RDRQNPISLVLPANSGKNFYTAEFHPETPALILVNS  214 (609)
T ss_pred             cCCCCCCceeeecCCCccceeeeecCCCceeEEecc
Confidence            7544 1  222223344567788999655 444443

>KOG4547|consensus

Probab=98.99  E-value=2.2e-08  Score=62.78  Aligned_cols=65  Identities=15%  Similarity=0.243  Sum_probs=58.7

Q ss_pred             CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +|.+.+.++.++.+-..+.+++.|..+..|+.+.++..+.+......+.+++.+||+.++++++.
T Consensus       100 ~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as~  164 (541)
T KOG4547|consen  100 KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTASR  164 (541)
T ss_pred             CCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEeccc
Confidence            55678899988888889999999999999999999999999888888999999999999998875

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.99  E-value=7e-08  Score=60.37  Aligned_cols=101  Identities=19%  Similarity=0.165  Sum_probs=63.9

Q ss_pred             CCceEEEEccCCCcEEEEeeC-CCeEEEE--ECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC---eEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD-NSACVLF--DLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR---HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~-~~~v~i~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~---~i~   78 (116)
                      +......|+| +++.++..+. .+...+|  +..+++. ..+...      ........|+|+|+.++..+.++   .|.
T Consensus       284 ~~~~~~~wSp-DG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~------g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~  355 (427)
T PRK02889        284 GIDTEPFFSP-DGRSIYFTSDRGGAPQIYRMPASGGAA-QRVTFT------GSYNTSPRISPDGKLLAYISRVGGAFKLY  355 (427)
T ss_pred             CCCcCeEEcC-CCCEEEEEecCCCCcEEEEEECCCCce-EEEecC------CCCcCceEECCCCCEEEEEEccCCcEEEE
Confidence            3456788999 7777765543 3444454  5554443 222222      12234578999999888766543   699


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +||+.+++...... . .......|+|+|+.|+.++.
T Consensus       356 v~d~~~g~~~~lt~-~-~~~~~p~~spdg~~l~~~~~  390 (427)
T PRK02889        356 VQDLATGQVTALTD-T-TRDESPSFAPNGRYILYATQ  390 (427)
T ss_pred             EEECCCCCeEEccC-C-CCccCceECCCCCEEEEEEe
Confidence            99998877544332 2 23467899999999886653

>KOG2321|consensus

Probab=98.99  E-value=2.6e-08  Score=62.85  Aligned_cols=108  Identities=9%  Similarity=0.037  Sum_probs=81.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCC-----CceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGG-----GGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .+.+.++..++ ...+|++|+.++.|..||..+...+..+........+.     ..|+++.|+-+|-.+++|..+|.+.
T Consensus       175 ~~~lN~v~in~-~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~  253 (703)
T KOG2321|consen  175 SGELNVVSINE-EHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVL  253 (703)
T ss_pred             cccceeeeecC-ccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEE
Confidence            36788888888 66788888899999999999877766665443211112     3489999999999999999999999


Q ss_pred             EEECCCCeEEEEee-cccccEEEEEECCC--CcEEEe
Q psy17133         79 FFDNVSGKLVHSMV-AHLDAVTSLAVDPQ--GLYILS  112 (116)
Q Consensus        79 ~~~~~~~~~~~~~~-~~~~~v~~~~~~~~--~~~l~~  112 (116)
                      |||+++.+++..-. ...-++..+.|.+.  .+.+++
T Consensus       254 iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S  290 (703)
T KOG2321|consen  254 IYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVS  290 (703)
T ss_pred             EEEcccCCceeecccCCccceeeecccccCCCceEEe
Confidence            99999887765433 33457888888765  344544

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.98  E-value=9.2e-08  Score=59.94  Aligned_cols=101  Identities=15%  Similarity=0.115  Sum_probs=65.8

Q ss_pred             CCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--eEE
Q psy17133          5 GTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~i~   78 (116)
                      +...+..|+| +++.++ +.+.+  ..|++||+.+++. ..+..+      .......+|+||++.++..+. ++  .|.
T Consensus       248 g~~~~~~~Sp-DG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~------~~~~~~~~~spDG~~l~f~sd~~g~~~iy  319 (433)
T PRK04922        248 GINGAPSFSP-DGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNH------FGIDTEPTWAPDGKSIYFTSDRGGRPQIY  319 (433)
T ss_pred             CCccCceECC-CCCEEEEEEeCCCCceEEEEECCCCCe-EECccC------CCCccceEECCCCCEEEEEECCCCCceEE
Confidence            3445789999 666654 44444  3699999987754 344433      234567899999998877654 33  477


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++++.+++...... ........+|+|+|++++..+
T Consensus       320 ~~dl~~g~~~~lt~-~g~~~~~~~~SpDG~~Ia~~~  354 (433)
T PRK04922        320 RVAASGGSAERLTF-QGNYNARASVSPDGKKIAMVH  354 (433)
T ss_pred             EEECCCCCeEEeec-CCCCccCEEECCCCCEEEEEE
Confidence            77877666543322 223345689999999987654

>KOG1310|consensus

Probab=98.98  E-value=2.3e-09  Score=67.21  Aligned_cols=71  Identities=23%  Similarity=0.317  Sum_probs=60.7

Q ss_pred             eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECC--CCcEEEeeecC
Q psy17133         40 VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDP--QGLYILSGTYQ  116 (116)
Q Consensus        40 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~s~d  116 (116)
                      ..++.+|      ++.|+++.|+.+|.++++|++|-.+.|||.-..++++.+. +|.+-|.++.|-|  ..+++++|+.|
T Consensus        43 E~eL~GH------~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgD  116 (758)
T KOG1310|consen   43 EAELTGH------TGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGD  116 (758)
T ss_pred             hhhhccc------cceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCc
Confidence            4556677      8899999999999999999999999999998888887775 7899999999988  45677787765

>KOG1587|consensus

Probab=98.98  E-value=3.5e-08  Score=63.00  Aligned_cols=110  Identities=21%  Similarity=0.192  Sum_probs=74.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRF   79 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~   79 (116)
                      ...|+++.|+|.+.+.++.|..+|+|.+||+..+..  ...+..+  ...|...+..+.|-.+..  -+++++.||.|..
T Consensus       242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~--~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~  319 (555)
T KOG1587|consen  242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSAL--EVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICS  319 (555)
T ss_pred             CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccc--cccCCcCeEEEEEeccCCCCceEEEecCCcEee
Confidence            467899999998889999999999999999986554  2222211  123467888999986544  4888888999999


Q ss_pred             EECCCCeE------EEEee------cccccEEEEEECCC-CcEEEeeec
Q psy17133         80 FDNVSGKL------VHSMV------AHLDAVTSLAVDPQ-GLYILSGTY  115 (116)
Q Consensus        80 ~~~~~~~~------~~~~~------~~~~~v~~~~~~~~-~~~l~~~s~  115 (116)
                      |+++.-..      .....      .....+++++|.+. ...++.|+.
T Consensus       320 W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe  368 (555)
T KOG1587|consen  320 WDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTE  368 (555)
T ss_pred             eeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcC
Confidence            98763221      11111      12346788999874 344555543

>KOG4497|consensus

Probab=98.96  E-value=3.9e-09  Score=62.59  Aligned_cols=97  Identities=14%  Similarity=0.045  Sum_probs=77.6

Q ss_pred             EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCE-EEEEeCCCeEEEEECCCCeE
Q psy17133          9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL-TITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~   87 (116)
                      -..|+| +|+++++.++- .+.|-|.++-+....+..-       ..|..+.|..+..+ ++....++.|.+|++...+-
T Consensus        13 ~c~fSp-~g~yiAs~~~y-rlviRd~~tlq~~qlf~cl-------dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew   83 (447)
T KOG4497|consen   13 FCSFSP-CGNYIASLSRY-RLVIRDSETLQLHQLFLCL-------DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEW   83 (447)
T ss_pred             ceeECC-CCCeeeeeeee-EEEEeccchhhHHHHHHHH-------HHhhheeeeccceeeeeeeeccceEEEEEeeccee
Confidence            367899 89999998865 7888898887766655543       35778889888664 55677889999999998888


Q ss_pred             EEEeecccccEEEEEECCCCcEEEeee
Q psy17133         88 VHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ...+....+.+..++|+|||+.+...+
T Consensus        84 ~ckIdeg~agls~~~WSPdgrhiL~ts  110 (447)
T KOG4497|consen   84 YCKIDEGQAGLSSISWSPDGRHILLTS  110 (447)
T ss_pred             EEEeccCCCcceeeeECCCcceEeeee
Confidence            888877778899999999998776554

>KOG0280|consensus

Probab=98.96  E-value=7.6e-08  Score=56.31  Aligned_cols=103  Identities=17%  Similarity=0.143  Sum_probs=76.6

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~   83 (116)
                      ..++.|++ .+..++++..++.+.+-+......  +..++.|      .-.+.-..|+-. ..++++|++|+.+..||++
T Consensus       124 ~lslD~~~-~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~H------e~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R  196 (339)
T KOG0280|consen  124 ALSLDIST-SGTKIFVSDSRGSISGVYETEMVLEKVQTWKVH------EFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIR  196 (339)
T ss_pred             eeEEEeec-cCceEEEEcCCCcEEEEecceeeeeeccccccc------ceeeeeeecccCCCceEEecCCCceEEEEEec
Confidence            45778888 778888888889888555443433  3467777      556777777754 4689999999999999998


Q ss_pred             -CCeEEEE-eecccccEEEEEECC-CCcEEEeeecC
Q psy17133         84 -SGKLVHS-MVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        84 -~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                       .++.+.. .+.|...|.++.-+| .+.+++||+.|
T Consensus       197 ~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYD  232 (339)
T KOG0280|consen  197 IPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYD  232 (339)
T ss_pred             CCcceeeecceeeecceEEEecCCCCCceEEEeccc
Confidence             4444433 445778888888776 57799999876

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.96  E-value=1.3e-07  Score=59.22  Aligned_cols=99  Identities=11%  Similarity=0.095  Sum_probs=64.7

Q ss_pred             ceEEEEccCCCcEEEEee-CCCe--EEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEEE
Q psy17133          7 PTSIDFVRDESTKMVTAF-DNSA--CVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIRF   79 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~-~~~~--v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~~   79 (116)
                      .....|+| +++.|+..+ .++.  ++++++.. +.....+...      ...+....|+|||+.++....+   ..|.+
T Consensus       283 ~~~p~wSP-DG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~------~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v  355 (428)
T PRK01029        283 QGNPSFSP-DGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKK------YRNSSCPAWSPDGKKIAFCSVIKGVRQICV  355 (428)
T ss_pred             cCCeEECC-CCCEEEEEECCCCCceEEEEECcccccceEEeccC------CCCccceeECCCCCEEEEEEcCCCCcEEEE
Confidence            45679999 777766554 4554  55555542 2333444333      2346778999999988765442   47999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ||+.+++...... ....+....|+|||+.|+..
T Consensus       356 ~dl~~g~~~~Lt~-~~~~~~~p~wSpDG~~L~f~  388 (428)
T PRK01029        356 YDLATGRDYQLTT-SPENKESPSWAIDSLHLVYS  388 (428)
T ss_pred             EECCCCCeEEccC-CCCCccceEECCCCCEEEEE
Confidence            9999887654433 23456778999999988743

>KOG2695|consensus

Probab=98.93  E-value=5.7e-09  Score=62.14  Aligned_cols=87  Identities=16%  Similarity=0.169  Sum_probs=68.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .|.+.|+++.-...+.++|.+.+.+++|.+||.+.-+.   +..+++|..    .....-+.+++.+..++++++|...+
T Consensus       296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN----~~a~l~~~v~~eeg~I~s~GdDcytR  371 (425)
T KOG2695|consen  296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVN----LSAYLPAHVKEEEGSIFSVGDDCYTR  371 (425)
T ss_pred             EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccc----cccccccccccccceEEEccCeeEEE
Confidence            57778888776543568899999999999999985444   788888854    34445566677778888999999999


Q ss_pred             EEECCCCeEEEEee
Q psy17133         79 FFDNVSGKLVHSMV   92 (116)
Q Consensus        79 ~~~~~~~~~~~~~~   92 (116)
                      +|.++.|.++.++.
T Consensus       372 iWsl~~ghLl~tip  385 (425)
T KOG2695|consen  372 IWSLDSGHLLCTIP  385 (425)
T ss_pred             EEecccCceeeccC
Confidence            99999999888765

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.91  E-value=2.2e-07  Score=57.81  Aligned_cols=102  Identities=16%  Similarity=0.146  Sum_probs=67.0

Q ss_pred             CCceEEEEccCCCcEEEE-eeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEE
Q psy17133          5 GTPTSIDFVRDESTKMVT-AFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~-~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~   78 (116)
                      +.+.++.|+| +++.++. .+.+  ..+++|++.+++. ..+..+      ........|+|+++.++..+..   ..|.
T Consensus       234 ~~~~~~~~sp-Dg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~------~~~~~~~~~s~dg~~l~~~s~~~g~~~iy  305 (417)
T TIGR02800       234 GMNGAPAFSP-DGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNG------PGIDTEPSWSPDGKSIAFTSDRGGSPQIY  305 (417)
T ss_pred             CCccceEECC-CCCEEEEEECCCCCccEEEEECCCCCE-EECCCC------CCCCCCEEECCCCCEEEEEECCCCCceEE
Confidence            4456789999 6666654 4433  4688899886653 333333      2234567899999987765543   2688


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++++.+++... +..+......+.|+|++++++.++.
T Consensus       306 ~~d~~~~~~~~-l~~~~~~~~~~~~spdg~~i~~~~~  341 (417)
T TIGR02800       306 MMDADGGEVRR-LTFRGGYNASPSWSPDGDLIAFVHR  341 (417)
T ss_pred             EEECCCCCEEE-eecCCCCccCeEECCCCCEEEEEEc
Confidence            88887766543 3334445677899999998887654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0280|consensus

Probab=98.89  E-value=5.6e-08  Score=56.86  Aligned_cols=98  Identities=16%  Similarity=0.158  Sum_probs=71.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEE-EecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVR-IDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~   79 (116)
                      |+-+.....|+..+.+.+.+|++|+.+..||++ .++.+.. .+.|      ...|.++.-+| .+.++++|+-|-.|++
T Consensus       164 He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH------~~GV~SI~ss~~~~~~I~TGsYDe~i~~  237 (339)
T KOG0280|consen  164 HEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVH------TSGVVSIYSSPPKPTYIATGSYDECIRV  237 (339)
T ss_pred             cceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceee------ecceEEEecCCCCCceEEEeccccceee
Confidence            444556677877677899999999999999998 3333332 3344      56788888776 4779999999999999


Q ss_pred             EECCC-CeEEEEeecccccEEEEEECCCC
Q psy17133         80 FDNVS-GKLVHSMVAHLDAVTSLAVDPQG  107 (116)
Q Consensus        80 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~  107 (116)
                      ||.++ ++++..-. ..+.|..++++|.-
T Consensus       238 ~DtRnm~kPl~~~~-v~GGVWRi~~~p~~  265 (339)
T KOG0280|consen  238 LDTRNMGKPLFKAK-VGGGVWRIKHHPEI  265 (339)
T ss_pred             eehhcccCccccCc-cccceEEEEecchh
Confidence            99884 44444333 34678999988853

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.88  E-value=1.3e-06  Score=53.31  Aligned_cols=111  Identities=17%  Similarity=0.284  Sum_probs=70.0

Q ss_pred             CCCceEEEEccCCCcEEEEe-eCCCeEEEEECC--CCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeE
Q psy17133          4 NGTPTSIDFVRDESTKMVTA-FDNSACVLFDLE--TGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~--~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i   77 (116)
                      ...+..+.|+| +++++.+. -.+..|.++++.  +++.  +..+...............+.++||+++++++. ..+.|
T Consensus       191 G~GPRh~~f~p-dg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI  269 (345)
T PF10282_consen  191 GSGPRHLAFSP-DGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSI  269 (345)
T ss_dssp             TSSEEEEEE-T-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEE
T ss_pred             CCCCcEEEEcC-CcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEE
Confidence            34578899999 66766555 457889998887  4422  222222110001122578899999999887765 47899


Q ss_pred             EEEECC--CCeE--EEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         78 RFFDNV--SGKL--VHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        78 ~~~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+|++.  ++++  +..+.......+.++++|+|++|++++.
T Consensus       270 ~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~  311 (345)
T PF10282_consen  270 SVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQ  311 (345)
T ss_dssp             EEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEET
T ss_pred             EEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEec
Confidence            999983  3443  3333333445899999999999998764

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.88  E-value=1.1e-08  Score=42.58  Aligned_cols=31  Identities=10%  Similarity=0.153  Sum_probs=28.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFD   33 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~   33 (116)
                      .|.+.|.+++|+| ++.++++++.|+.|++||
T Consensus         9 ~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    9 GHSSSINSIAWSP-DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             SSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred             CCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence            3789999999999 789999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG4640|consensus

Probab=98.87  E-value=5.7e-08  Score=61.81  Aligned_cols=93  Identities=14%  Similarity=0.137  Sum_probs=74.5

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCce-eEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGI-NRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ..+.-+.|+| .-..++.+...|.+.+..++ .+.+..++.+.      ..+ .+++|.|||++++.|-.||+|++.|.+
T Consensus        21 ~~i~~~ewnP-~~dLiA~~t~~gelli~R~n-~qRlwtip~p~------~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve   92 (665)
T KOG4640|consen   21 INIKRIEWNP-KMDLIATRTEKGELLIHRLN-WQRLWTIPIPG------ENVTASLCWRPDGKLLAVGFKDGTIRLHDVE   92 (665)
T ss_pred             cceEEEEEcC-ccchhheeccCCcEEEEEec-cceeEeccCCC------CccceeeeecCCCCEEEEEecCCeEEEEEcc
Confidence            3467789999 88999999999999999988 77778887552      234 599999999999999999999999999


Q ss_pred             CCeEEEEee-cccccEEEEEECC
Q psy17133         84 SGKLVHSMV-AHLDAVTSLAVDP  105 (116)
Q Consensus        84 ~~~~~~~~~-~~~~~v~~~~~~~  105 (116)
                      ++..+.... .....+..+-|++
T Consensus        93 ~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   93 KGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             CCCceeccccccccchheeeccc
Confidence            988877632 2344677777753

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.84  E-value=4.9e-07  Score=57.00  Aligned_cols=99  Identities=15%  Similarity=0.130  Sum_probs=64.0

Q ss_pred             ceEEEEccCCCcEEEE-eeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEEE
Q psy17133          7 PTSIDFVRDESTKMVT-AFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRFF   80 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~-~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~~   80 (116)
                      .....|+| +++.|+. ...++  .|+++|+.+++. ..+..+      ........|+||++.++..+. +  ..|.++
T Consensus       264 ~~~~~wSP-DG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~------~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~  335 (448)
T PRK04792        264 NGAPRFSP-DGKKLALVLSKDGQPEIYVVDIATKAL-TRITRH------RAIDTEPSWHPDGKSLIFTSERGGKPQIYRV  335 (448)
T ss_pred             cCCeeECC-CCCEEEEEEeCCCCeEEEEEECCCCCe-EECccC------CCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence            45678999 6776654 44455  478888876654 334333      234567889999997766554 3  357777


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+++...... ........+|+|||++|+..+
T Consensus       336 dl~~g~~~~Lt~-~g~~~~~~~~SpDG~~l~~~~  368 (448)
T PRK04792        336 NLASGKVSRLTF-EGEQNLGGSITPDGRSMIMVN  368 (448)
T ss_pred             ECCCCCEEEEec-CCCCCcCeeECCCCCEEEEEE
Confidence            887776544321 222234578999999887654

>KOG1517|consensus

Probab=98.82  E-value=3.5e-08  Score=66.16  Aligned_cols=109  Identities=17%  Similarity=0.296  Sum_probs=78.3

Q ss_pred             CCCC--ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNGT--PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~--v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |+..  |..+.+.+.+-..|++++.+|.|++||++......  .+..+..+   .+..+++.++++.+++++|+. ..|+
T Consensus      1253 h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y---Gs~lTal~VH~hapiiAsGs~-q~ik 1328 (1387)
T KOG1517|consen 1253 HNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY---GSALTALTVHEHAPIIASGSA-QLIK 1328 (1387)
T ss_pred             cCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeecccc---CccceeeeeccCCCeeeecCc-ceEE
Confidence            4444  88899988333469999999999999998532222  22222110   235899999999999999988 9999


Q ss_pred             EEECCCCeEEEEee-------cccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMV-------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||++. |+.+..++       ...+.+.+++|+|-...++.|+.|
T Consensus      1329 Iy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~D 1372 (1387)
T KOG1517|consen 1329 IYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSAD 1372 (1387)
T ss_pred             EEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCC
Confidence            99986 55444433       234567999999998888887665

>KOG1240|consensus

Probab=98.80  E-value=5.3e-07  Score=61.47  Aligned_cols=57  Identities=11%  Similarity=0.054  Sum_probs=45.8

Q ss_pred             CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEECCCC
Q psy17133         51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDPQG  107 (116)
Q Consensus        51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~  107 (116)
                      ...+.|++++.+|.+.+++.|...|.+.+||++-+..+..+. ++..+++.+..+|..
T Consensus      1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~ 1250 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTY 1250 (1431)
T ss_pred             ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccC
Confidence            344678999999999999999999999999999888877665 344577777776643

>KOG1334|consensus

Probab=98.79  E-value=1.4e-08  Score=62.76  Aligned_cols=107  Identities=17%  Similarity=0.293  Sum_probs=81.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECC--CC----------ceeEE-EecCCcCcCCCCceeEEEE-cCCCCEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TG----------KPVVR-IDSSQFGVSGGGGINRVVC-HPTLPLTIT   70 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~----------~~~~~-~~~~~~~~~~~~~i~~~~~-~~~~~~~~~   70 (116)
                      -.|+++.|+. ++.-|+++..+..|+++...  .|          ..+.. +++|..    ...|..+-| -|...++++
T Consensus       337 v~ITgl~Ysh-~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN----~~TVKgVNFfGPrsEyVvS  411 (559)
T KOG1334|consen  337 VNITGLVYSH-DGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRN----SRTVKGVNFFGPRSEYVVS  411 (559)
T ss_pred             ccceeEEecC-CccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccc----ccccceeeeccCccceEEe
Confidence            3589999998 66667777778889998543  23          22233 677754    345767655 488889999


Q ss_pred             EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++-|.|.+|+=.+++.++.+.+...-|.++.-+|--..||+.+-|
T Consensus       412 GSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid  457 (559)
T KOG1334|consen  412 GSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGID  457 (559)
T ss_pred             cCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCc
Confidence            9999999999999999888888777778888888888888887654

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=6.2e-07  Score=56.23  Aligned_cols=103  Identities=18%  Similarity=0.165  Sum_probs=59.4

Q ss_pred             CCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDR   75 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~   75 (116)
                      +......|+| +|+.|+..+.     +..+..|++..+   +........      ........|+|||+.++..+ .++
T Consensus       231 g~~~~p~wSP-DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~------~~~~~~p~wSPDG~~Laf~s~~~g  303 (428)
T PRK01029        231 GNQLMPTFSP-RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEA------FGTQGNPSFSPDGTRLVFVSNKDG  303 (428)
T ss_pred             CCccceEECC-CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCC------CCCcCCeEECCCCCEEEEEECCCC
Confidence            3445678999 7777765442     223344666542   222222222      12345679999999777655 355


Q ss_pred             e--EEEEECCC-CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         76 H--IRFFDNVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        76 ~--i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .  |.++++.. +.....+......+....|+|||+.|+..+
T Consensus       304 ~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~  345 (428)
T PRK01029        304 RPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCS  345 (428)
T ss_pred             CceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEE
Confidence            4  44445432 222333433444567889999999887654

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=2.2e-06  Score=53.66  Aligned_cols=101  Identities=11%  Similarity=0.022  Sum_probs=65.6

Q ss_pred             CCceEEEEccCCCcE-EEEee-C--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeC--CCeE
Q psy17133          5 GTPTSIDFVRDESTK-MVTAF-D--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHD--DRHI   77 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~-l~~~~-~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~--d~~i   77 (116)
                      +......|+| +++. ++..+ .  ...|+++|+.+++...... .      .+......|+|||+.++. .+.  +..|
T Consensus       188 ~~~~~p~wSp-DG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~------~g~~~~~~~SPDG~~la~~~~~~g~~~I  259 (419)
T PRK04043        188 GLNIFPKWAN-KEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-S------QGMLVVSDVSKDGSKLLLTMAPKGQPDI  259 (419)
T ss_pred             CCeEeEEECC-CCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-C------CCcEEeeEECCCCCEEEEEEccCCCcEE
Confidence            3456789999 6663 55433 2  4679999998776544433 2      244566789999986654 333  4578


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .++++.+++..+ +...........|+|||+.|+-.+
T Consensus       260 y~~dl~~g~~~~-LT~~~~~d~~p~~SPDG~~I~F~S  295 (419)
T PRK04043        260 YLYDTNTKTLTQ-ITNYPGIDVNGNFVEDDKRIVFVS  295 (419)
T ss_pred             EEEECCCCcEEE-cccCCCccCccEECCCCCEEEEEE
Confidence            888988776544 332333334568999999887554

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.79  E-value=1.1e-06  Score=55.14  Aligned_cols=100  Identities=8%  Similarity=0.002  Sum_probs=64.8

Q ss_pred             CceEEEEccCCCcEEEE-eeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEE
Q psy17133          6 TPTSIDFVRDESTKMVT-AFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~-~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~   79 (116)
                      .+....|+| +++.++. ...++  .++++|+.+++. ..+..+      ........|+|+++.++..+. +  ..|.+
T Consensus       244 ~~~~~~~Sp-DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~------~~~~~~~~~spDg~~i~f~s~~~g~~~iy~  315 (430)
T PRK00178        244 LNGAPAWSP-DGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNH------PAIDTEPFWGKDGRTLYFTSDRGGKPQIYK  315 (430)
T ss_pred             CcCCeEECC-CCCEEEEEEccCCCceEEEEECCCCCe-EEcccC------CCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence            345689999 6776664 44343  688889987654 334433      234566789999987766554 3  36788


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +++.+++..+... .........|+|++++++..+
T Consensus       316 ~d~~~g~~~~lt~-~~~~~~~~~~Spdg~~i~~~~  349 (430)
T PRK00178        316 VNVNGGRAERVTF-VGNYNARPRLSADGKTLVMVH  349 (430)
T ss_pred             EECCCCCEEEeec-CCCCccceEECCCCCEEEEEE
Confidence            8887776544322 122234578999999987654

>KOG2315|consensus

Probab=98.78  E-value=7.9e-08  Score=60.27  Aligned_cols=92  Identities=15%  Similarity=0.217  Sum_probs=67.6

Q ss_pred             CCCCceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------   73 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------   73 (116)
                      .+++-.++-|+| .|++++.++   ..|.+-+||+.+.+.+..++..        ..+-..|+|||++++++..      
T Consensus       310 ~egpRN~~~fnp-~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~--------~tt~~eW~PdGe~flTATTaPRlrv  380 (566)
T KOG2315|consen  310 PEGPRNTAFFNP-HGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA--------NTTVFEWSPDGEYFLTATTAPRLRV  380 (566)
T ss_pred             CCCCccceEECC-CCCEEEEeecCCCCCceEEEeccchhhccccccC--------CceEEEEcCCCcEEEEEeccccEEe
Confidence            467778899999 778776654   4688999999998888888766        3577899999999988764      


Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      |+-++||+.. |..+....-. .....+.|-|
T Consensus       381 dNg~Kiwhyt-G~~l~~~~f~-sEL~qv~W~P  410 (566)
T KOG2315|consen  381 DNGIKIWHYT-GSLLHEKMFK-SELLQVEWRP  410 (566)
T ss_pred             cCCeEEEEec-Cceeehhhhh-HhHhheeeee
Confidence            6889999975 6655433211 1455566654

>KOG1538|consensus

Probab=98.75  E-value=1.2e-06  Score=56.94  Aligned_cols=106  Identities=12%  Similarity=0.134  Sum_probs=83.3

Q ss_pred             CCCCceEEEEccCCC----cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDES----TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~----~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .+++|.+++|+|..+    +.+++..-+.++.++.+. |+.+..-+.-      .-...++.+.++|.++..|+.|+.+.
T Consensus       175 ~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L------~FdP~CisYf~NGEy~LiGGsdk~L~  247 (1081)
T KOG1538|consen  175 SNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRAL------NFDPCCISYFTNGEYILLGGSDKQLS  247 (1081)
T ss_pred             CCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccC------CCCchhheeccCCcEEEEccCCCceE
Confidence            467899999998532    456777777788888875 5555433332      23467899999999999999999999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|. +.|..+.+.......|+.+...|++++++.|+.|
T Consensus       248 ~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqD  284 (1081)
T KOG1538|consen  248 LFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQD  284 (1081)
T ss_pred             EEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEcc
Confidence            998 4588888877778899999999999999998876

>KOG1334|consensus

Probab=98.73  E-value=1.7e-07  Score=58.18  Aligned_cols=114  Identities=17%  Similarity=0.276  Sum_probs=82.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCc------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGV------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~------------------------------   50 (116)
                      .|.|.|..+.|+. .|..+++++.+.++.+||...+++...+. +|...+                              
T Consensus       140 ~H~GcVntV~FN~-~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~  218 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQ-RGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILE  218 (559)
T ss_pred             CCCCccceeeecc-cCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeecc
Confidence            4789999999998 89999999999999999998776655443 222111                              


Q ss_pred             -----------CCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEEEEee---cccc---cEEEEEECCCCc-EEE
Q psy17133         51 -----------SGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNVSGKLVHSMV---AHLD---AVTSLAVDPQGL-YIL  111 (116)
Q Consensus        51 -----------~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~---~~~~---~v~~~~~~~~~~-~l~  111 (116)
                                 .|.+.+..++..|+. ..+.++++|+.+.-+|+.++.....+.   .+..   ....++.+|-.. .++
T Consensus       219 t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~fa  298 (559)
T KOG1334|consen  219 TGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFA  298 (559)
T ss_pred             ccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCccccc
Confidence                       567778888888874 577889999999999988765443332   2222   456778888544 677


Q ss_pred             eeecC
Q psy17133        112 SGTYQ  116 (116)
Q Consensus       112 ~~s~d  116 (116)
                      +++.|
T Consensus       299 VgG~d  303 (559)
T KOG1334|consen  299 VGGSD  303 (559)
T ss_pred             cCChh
Confidence            76654

>KOG2314|consensus

Probab=98.72  E-value=4.9e-07  Score=57.20  Aligned_cols=103  Identities=12%  Similarity=0.074  Sum_probs=75.4

Q ss_pred             CCCceEEEEccCCCcEEEEee-----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      ...|.-+.||| +.++|++=+           ...++.|||+.+|...+.|..-...   ...-.-+.|+.|++++|...
T Consensus       249 Hp~Vq~idfSP-~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~---~~~WP~frWS~DdKy~Arm~  324 (698)
T KOG2314|consen  249 HPGVQFIDFSP-NEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSP---YLKWPIFRWSHDDKYFARMT  324 (698)
T ss_pred             CCCceeeecCC-ccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCC---ccccceEEeccCCceeEEec
Confidence            34578899999 778888743           2267999999999988888763210   12345678999999998876


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      . ..|.+|+..+-.++..-...-..|..+.|+|.++.||
T Consensus       325 ~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llA  362 (698)
T KOG2314|consen  325 G-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLA  362 (698)
T ss_pred             c-ceEEEEecCceeeecccccCCccccCcccCCCcceEE
Confidence            5 6899999876554433333445789999999988876

>KOG1517|consensus

Probab=98.69  E-value=6.4e-07  Score=60.49  Aligned_cols=106  Identities=17%  Similarity=0.143  Sum_probs=76.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFF   80 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~   80 (116)
                      ..|+++.-+...++.+++|..||.+++||.+...   .+...+.|..    ...|..+.+.+.|- .+++++.+|.|.+|
T Consensus      1209 t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~----~~~Iv~~slq~~G~~elvSgs~~G~I~~~ 1284 (1387)
T KOG1517|consen 1209 TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHND----VEPIVHLSLQRQGLGELVSGSQDGDIQLL 1284 (1387)
T ss_pred             ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCC----cccceeEEeecCCCcceeeeccCCeEEEE
Confidence            3466666555468999999999999999987432   3555666632    22388888888765 59999999999999


Q ss_pred             ECCCCeEEEE--eeccc--c-cEEEEEECCCCcEEEeee
Q psy17133         81 DNVSGKLVHS--MVAHL--D-AVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~~~~~~~~--~~~~~--~-~v~~~~~~~~~~~l~~~s  114 (116)
                      |++.......  ...|.  + ..+++..+++...+|+|+
T Consensus      1285 DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs 1323 (1387)
T KOG1517|consen 1285 DLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGS 1323 (1387)
T ss_pred             ecccCcccccceeeeccccCccceeeeeccCCCeeeecC
Confidence            9985322221  11221  3 488999999999999987

>KOG0644|consensus

Probab=98.65  E-value=1.7e-08  Score=66.13  Aligned_cols=71  Identities=20%  Similarity=0.345  Sum_probs=63.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|+.++.+. +..++++++.|..|++|.+.++.++..+.+|      ++.|++++|+|-.    +.+.||++++||
T Consensus       230 Ghs~ditdlavs~-~n~~iaaaS~D~vIrvWrl~~~~pvsvLrgh------tgavtaiafsP~~----sss~dgt~~~wd  298 (1113)
T KOG0644|consen  230 GHSGDITDLAVSS-NNTMIAAASNDKVIRVWRLPDGAPVSVLRGH------TGAVTAIAFSPRA----SSSDDGTCRIWD  298 (1113)
T ss_pred             CCccccchhccch-hhhhhhhcccCceEEEEecCCCchHHHHhcc------ccceeeeccCccc----cCCCCCceEecc
Confidence            3788899999887 6678899999999999999999999999999      7899999999965    677899999999


Q ss_pred             CC
Q psy17133         82 NV   83 (116)
Q Consensus        82 ~~   83 (116)
                      .+
T Consensus       299 ~r  300 (1113)
T KOG0644|consen  299 AR  300 (1113)
T ss_pred             cc
Confidence            76

>KOG2321|consensus

Probab=98.63  E-value=8.1e-07  Score=56.42  Aligned_cols=100  Identities=21%  Similarity=0.310  Sum_probs=76.9

Q ss_pred             EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133          9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~   88 (116)
                      ++.++.....++++|+ ...|+-++++.|..+..|...      .+.++.+.+++-..++++|+.+|.+..||.+.....
T Consensus       138 Dm~y~~~scDly~~gs-g~evYRlNLEqGrfL~P~~~~------~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv  210 (703)
T KOG2321|consen  138 DMKYHKPSCDLYLVGS-GSEVYRLNLEQGRFLNPFETD------SGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV  210 (703)
T ss_pred             cccccCCCccEEEeec-CcceEEEEccccccccccccc------cccceeeeecCccceEEecccCceEEEecchhhhhh
Confidence            4455432445555554 557899999999999988877      578999999999889999999999999999877655


Q ss_pred             EEeec------cc-----ccEEEEEECCCCcEEEeeec
Q psy17133         89 HSMVA------HL-----DAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        89 ~~~~~------~~-----~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+..      +.     ..|+++.|+.+|-.++.|+.
T Consensus       211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts  248 (703)
T KOG2321|consen  211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTS  248 (703)
T ss_pred             eeeecccccCCCccccccCcceEEEecCCceeEEeecc
Confidence            55431      22     24899999999998887764

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.62  E-value=7.5e-06  Score=50.07  Aligned_cols=80  Identities=13%  Similarity=0.014  Sum_probs=61.4

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------CCeEEEEECCCCeEEEEeeccc-
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----------DRHIRFFDNVSGKLVHSMVAHL-   95 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------d~~i~~~~~~~~~~~~~~~~~~-   95 (116)
                      +.+.+.|..+++.+..+....       ....+ ++||++.++.+..          +..|.+||..+.+.+..+.... 
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~-------~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~   98 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGF-------LPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG   98 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccC-------CCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence            799999999999888887552       22334 9999998776654          7899999999999988776321 


Q ss_pred             ------ccEEEEEECCCCcEEEeee
Q psy17133         96 ------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        96 ------~~v~~~~~~~~~~~l~~~s  114 (116)
                            .....++++|||++|+...
T Consensus        99 p~~~~~~~~~~~~ls~dgk~l~V~n  123 (352)
T TIGR02658        99 PRFLVGTYPWMTSLTPDNKTLLFYQ  123 (352)
T ss_pred             chhhccCccceEEECCCCCEEEEec
Confidence                  1234789999999988654

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.61  E-value=3.3e-06  Score=49.40  Aligned_cols=44  Identities=18%  Similarity=0.160  Sum_probs=34.6

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      ...|..+.++|||.++++...+|.|.+|++.+-+..+.+..++.
T Consensus       229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~eq  272 (282)
T PF15492_consen  229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDEQ  272 (282)
T ss_pred             CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhhC
Confidence            44577888999999999999999999999887777666654433

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.60  E-value=7.3e-06  Score=52.14  Aligned_cols=106  Identities=14%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             CCceEEEEccCCCcEEEEe----eCCCe----EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          5 GTPTSIDFVRDESTKMVTA----FDNSA----CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~----~~~~~----v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      ..+.++.|+..+++.+.+-    +.++.    -.+|+...++. ......  ....++.+.+.+++|++..++.|+.||.
T Consensus       206 ~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~kl-qrvsvt--sipL~s~v~~ca~sp~E~kLvlGC~DgS  282 (545)
T PF11768_consen  206 NDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKL-QRVSVT--SIPLPSQVICCARSPSEDKLVLGCEDGS  282 (545)
T ss_pred             CCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCce-eEEEEE--EEecCCcceEEecCcccceEEEEecCCe
Confidence            3456677776455555543    22333    23555543322 111100  0011467899999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |.+||...+.....  ...-.+..++|+|+|..+++|+.
T Consensus       283 iiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~  319 (545)
T PF11768_consen  283 IILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSE  319 (545)
T ss_pred             EEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcC
Confidence            99999876543322  23445788999999999998874

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.57  E-value=1.8e-05  Score=54.81  Aligned_cols=108  Identities=16%  Similarity=0.197  Sum_probs=70.9

Q ss_pred             CceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCC------------cC---cCCCCceeEEEEcCCCCEEE
Q psy17133          6 TPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQ------------FG---VSGGGGINRVVCHPTLPLTI   69 (116)
Q Consensus         6 ~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~------------~~---~~~~~~i~~~~~~~~~~~~~   69 (116)
                      .+..++++| +++ ++++...++.|++||+.++.......+..            ..   ...-.....++++++|.+++
T Consensus       741 ~P~GIavsp-dG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYV  819 (1057)
T PLN02919        741 QPSGISLSP-DLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYV  819 (1057)
T ss_pred             CccEEEEeC-CCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEE
Confidence            456799999 555 55566678999999998765321111000            00   00011346889999999888


Q ss_pred             EEeCCCeEEEEECCCCeEEEEeec-------------ccccEEEEEECCCCcEEEeee
Q psy17133         70 TAHDDRHIRFFDNVSGKLVHSMVA-------------HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        70 ~~~~d~~i~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +-..++.|++||..++........             .-.....++++++|+.+++-+
T Consensus       820 ADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt  877 (1057)
T PLN02919        820 ADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADT  877 (1057)
T ss_pred             EECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEEC
Confidence            888899999999987766543210             112567899999998776644

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.54  E-value=2.6e-05  Score=45.49  Aligned_cols=103  Identities=21%  Similarity=0.225  Sum_probs=71.3

Q ss_pred             CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCce----eEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKP----VVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~----~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .....++|+| +++.| ++-+..+.|..+++.....    ...+ .....    .+....+++..+|.+.++....+.|.
T Consensus       134 ~~pNGi~~s~-dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~g~pDG~~vD~~G~l~va~~~~~~I~  208 (246)
T PF08450_consen  134 GFPNGIAFSP-DGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGG----PGYPDGLAVDSDGNLWVADWGGGRIV  208 (246)
T ss_dssp             SSEEEEEEET-TSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSS----SCEEEEEEEBTTS-EEEEEETTTEEE
T ss_pred             ccccceEECC-cchheeecccccceeEEEeccccccceeeeeeEEEcCCC----CcCCCcceEcCCCCEEEEEcCCCEEE
Confidence            3467899999 66655 4566788899998853221    1222 22210    23478899999999888888899999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEE-CCCCcEEEee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAV-DPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~  113 (116)
                      +++.+ |+.+..+......+++++| -++.+.|+..
T Consensus       209 ~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  209 VFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             EEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred             EECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence            99987 8888887755568999999 4676665543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG2695|consensus

Probab=98.53  E-value=3e-07  Score=55.06  Aligned_cols=104  Identities=13%  Similarity=0.140  Sum_probs=71.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~   78 (116)
                      +.|.++.|.. .++.+..|..++.|..+|++.+.     +...+ -|      .+.++++..-. ++.++.+.+.+|+|+
T Consensus       253 sDVfAlQf~~-s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh------~Ssvtslq~Lq~s~q~LmaS~M~gkik  324 (425)
T KOG2695|consen  253 SDVFALQFAG-SDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YH------DSSVTSLQILQFSQQKLMASDMTGKIK  324 (425)
T ss_pred             hhHHHHHhcc-cCCeeEecccCCcEEEEEeeecccCCCcceEEE-Ec------CcchhhhhhhccccceEeeccCcCcee
Confidence            4567778876 66899999999999999998542     22222 23      45688877665 678888889999999


Q ss_pred             EEECCCCeE---EEEeecccccE--EEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKL---VHSMVAHLDAV--TSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~---~~~~~~~~~~v--~~~~~~~~~~~l~~~s~d  116 (116)
                      +||.+--+.   +.++.+|...-  .-+-..+....+++++.|
T Consensus       325 LyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdD  367 (425)
T KOG2695|consen  325 LYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDD  367 (425)
T ss_pred             EeeehhhhcccceeeeecccccccccccccccccceEEEccCe
Confidence            999875444   77777764322  122234555566666655

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.53  E-value=3.5e-05  Score=46.52  Aligned_cols=104  Identities=16%  Similarity=0.346  Sum_probs=70.4

Q ss_pred             ceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~   84 (116)
                      +-...+.| +++++++.. ...++.+|++.+++....-....   .......-+.|+|++++.+..++ +++|.+|....
T Consensus       147 ~H~a~~tP-~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v---~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~  222 (346)
T COG2706         147 VHSANFTP-DGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV---KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNP  222 (346)
T ss_pred             cceeeeCC-CCCEEEEeecCCceEEEEEcccCcccccccccc---CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcC
Confidence            66778899 778887775 35689999998775432211110   01346788999999999887766 89999999876


Q ss_pred             --CeE--EEEee------cccccEEEEEECCCCcEEEeee
Q psy17133         85 --GKL--VHSMV------AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 --~~~--~~~~~------~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                        ++.  ++.+.      ........+..++||++|....
T Consensus       223 ~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasN  262 (346)
T COG2706         223 AVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASN  262 (346)
T ss_pred             CCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEec
Confidence              322  22221      1233567788899999997653

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.52  E-value=1.7e-05  Score=48.56  Aligned_cols=80  Identities=13%  Similarity=0.041  Sum_probs=58.8

Q ss_pred             EccCCCcEEEEe-e---------CCCeEEEEECCCCceeEEEecCCc-CcCCCCceeEEEEcCCCCEEEEEe-C-CCeEE
Q psy17133         12 FVRDESTKMVTA-F---------DNSACVLFDLETGKPVVRIDSSQF-GVSGGGGINRVVCHPTLPLTITAH-D-DRHIR   78 (116)
Q Consensus        12 ~~~~~~~~l~~~-~---------~~~~v~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~-~-d~~i~   78 (116)
                      ++| +++.++++ +         .+..|.+||..+.+.+.++..... -.........++++|||++++... . ++.+.
T Consensus        53 ~sp-Dg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~  131 (352)
T TIGR02658        53 VAS-DGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG  131 (352)
T ss_pred             ECC-CCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence            899 55655544 4         578999999999999988874311 000012345789999999988766 3 78999


Q ss_pred             EEECCCCeEEEEee
Q psy17133         79 FFDNVSGKLVHSMV   92 (116)
Q Consensus        79 ~~~~~~~~~~~~~~   92 (116)
                      +.|+.+++.+..+.
T Consensus       132 VvD~~~~kvv~ei~  145 (352)
T TIGR02658       132 VVDLEGKAFVRMMD  145 (352)
T ss_pred             EEECCCCcEEEEEe
Confidence            99999999888775

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.50  E-value=3.1e-05  Score=46.36  Aligned_cols=106  Identities=15%  Similarity=0.130  Sum_probs=74.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-----CCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-----DRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----d~~i~   78 (116)
                      .+.-.++.+|.....++.+-.-+. ..+||..+++....+.....    ....---.|++||+++++.-+     .|.|-
T Consensus         5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~g----RHFyGHg~fs~dG~~LytTEnd~~~g~G~Ig   80 (305)
T PF07433_consen    5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPG----RHFYGHGVFSPDGRLLYTTENDYETGRGVIG   80 (305)
T ss_pred             ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCC----CEEecCEEEcCCCCEEEEeccccCCCcEEEE
Confidence            344567788855566666665544 67899999988877765421    112224679999999988654     47899


Q ss_pred             EEECC-CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||.. +-+.+..+..+.-....+.+.|||+.|+.+.
T Consensus        81 Vyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN  117 (305)
T PF07433_consen   81 VYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVAN  117 (305)
T ss_pred             EEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEc
Confidence            99998 5566667776655667788999998887653

>KOG2314|consensus

Probab=98.50  E-value=2.5e-06  Score=54.16  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=73.3

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-----------CCe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-----------DRH   76 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----------d~~   76 (116)
                      +-+.||| .|.+|++-..- -|.+|--.+-.....|...        .+..+.|+|..++|++-+.           ...
T Consensus       214 tyv~wSP-~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp--------~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~  283 (698)
T KOG2314|consen  214 TYVRWSP-KGTYLVTFHKQ-GIALWGGESFDRIQRFYHP--------GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQ  283 (698)
T ss_pred             eeEEecC-CceEEEEEecc-ceeeecCccHHHHHhccCC--------CceeeecCCccceEEEecCCccccCcccCCCce
Confidence            4578999 88999987754 4889987766667777544        5899999999999998542           257


Q ss_pred             EEEEECCCCeEEEEeeccc---ccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKLVHSMVAHL---DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++|||+.+|...+.+....   ....-+.||.|++++|-..
T Consensus       284 l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~  324 (698)
T KOG2314|consen  284 LIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMT  324 (698)
T ss_pred             EEEEEccccchhcceeccCCCccccceEEeccCCceeEEec
Confidence            9999999999988876421   2223468999999998543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.49  E-value=3.2e-05  Score=48.64  Aligned_cols=99  Identities=15%  Similarity=0.095  Sum_probs=62.1

Q ss_pred             CCceEEEEccCCCcEEEE-eeC--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEE
Q psy17133          5 GTPTSIDFVRDESTKMVT-AFD--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~-~~~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~   78 (116)
                      +......|+| +++.++. .+.  +..++++++.+++. ..+...      ........|+|||+.++..++. +  .|.
T Consensus       233 g~~~~~~~SP-DG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~------~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy  304 (419)
T PRK04043        233 GMLVVSDVSK-DGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNY------PGIDVNGNFVEDDKRIVFVSDRLGYPNIF  304 (419)
T ss_pred             CcEEeeEECC-CCCEEEEEEccCCCcEEEEEECCCCcE-EEcccC------CCccCccEECCCCCEEEEEECCCCCceEE
Confidence            3345678999 6665544 333  45788889876653 344333      2223456799999877665542 2  688


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.++.+++..+......   ....|+|+|+.|+..+
T Consensus       305 ~~dl~~g~~~rlt~~g~---~~~~~SPDG~~Ia~~~  337 (419)
T PRK04043        305 MKKLNSGSVEQVVFHGK---NNSSVSTYKNYIVYSS  337 (419)
T ss_pred             EEECCCCCeEeCccCCC---cCceECCCCCEEEEEE
Confidence            88888777655433211   2358999999887544

>KOG2041|consensus

Probab=98.45  E-value=3.1e-06  Score=55.53  Aligned_cols=104  Identities=13%  Similarity=0.096  Sum_probs=79.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee---------------EEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV---------------VRIDSSQFGVSGGGGINRVVCHPTLP   66 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~~~~~~~~   66 (116)
                      +.+....++.|+. +..+++.|+.+|.+++.-+.+...-               .++++|      ...|.-+.|+.+..
T Consensus        12 PnnvkL~c~~WNk-e~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH------~~sV~vvTWNe~~Q   84 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNK-ESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGH------NASVMVVTWNENNQ   84 (1189)
T ss_pred             CCCceEEEEEEcc-cCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccC------cceEEEEEeccccc
Confidence            4567788999998 8899999999999999877643211               123444      78899999999999


Q ss_pred             EEEEEeCCCeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEe
Q psy17133         67 LTITAHDDRHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+-+...+|.|.+|-+-.|.....+.  .....|.+|+|+.+|..+..
T Consensus        85 KLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcI  132 (1189)
T KOG2041|consen   85 KLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICI  132 (1189)
T ss_pred             cccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEE
Confidence            99999999999999988775433222  24557889999999887654

>KOG4532|consensus

Probab=98.43  E-value=1.8e-05  Score=46.33  Aligned_cols=96  Identities=8%  Similarity=0.016  Sum_probs=69.5

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +..+.+++ +++++++.++..+|..|.+.. ++.+.. .....     +..=.+..|+.....+|++..|+++.+||++.
T Consensus       161 ~ns~~~sn-d~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t-----~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~  234 (344)
T KOG4532|consen  161 QNSLHYSN-DPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT-----SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRN  234 (344)
T ss_pred             eeeeEEcC-CCceEEEecCCCcceEEEeCCccceeeeeEeccc-----CCCceeeeeccCcceEEEEecCCcEEEEEecc
Confidence            67788898 788998888889999998864 333333 22221     23346788888899999999999999999985


Q ss_pred             CeEE-----EEeecccccEEEEEECCCCc
Q psy17133         85 GKLV-----HSMVAHLDAVTSLAVDPQGL  108 (116)
Q Consensus        85 ~~~~-----~~~~~~~~~v~~~~~~~~~~  108 (116)
                      ....     .+...|.+.++.+.|++-|.
T Consensus       235 ~~tpm~~~sstrp~hnGa~R~c~Fsl~g~  263 (344)
T KOG4532|consen  235 MATPMAEISSTRPHHNGAFRVCRFSLYGL  263 (344)
T ss_pred             cccchhhhcccCCCCCCceEEEEecCCCc
Confidence            4322     12235778899999997554

>KOG3621|consensus

Probab=98.42  E-value=3.3e-06  Score=54.73  Aligned_cols=105  Identities=12%  Similarity=0.070  Sum_probs=74.7

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.--+++. .+++++.|+..|.+++|+--.++. ..++....    .+.+....++++..++|.++..+.|.++.+.
T Consensus        33 ~~~v~lTc~ds-t~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~----~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~  106 (726)
T KOG3621|consen   33 PARVKLTCVDA-TEEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGA----TGITCVRSVSSVEYLVAAGTASGRVSVFQLN  106 (726)
T ss_pred             cceEEEEEeec-CCceEEEecccceEEEEecCchhh-hcccccCc----cceEEEEEecchhHhhhhhcCCceEEeehhh
Confidence            33444444555 678999999999999999775543 33332111    4567778889999999999999999999887


Q ss_pred             CCeEEEE-----e-ecccccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHS-----M-VAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~-----~-~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+.....     . ..|...|++++|+++++.+++|-
T Consensus       107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD  143 (726)
T KOG3621|consen  107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGD  143 (726)
T ss_pred             ccCCCcceeeccccccCCceEEEEEecccccEEeecC
Confidence            5432211     1 13567899999999999998864

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.40  E-value=2.6e-05  Score=53.39  Aligned_cols=108  Identities=15%  Similarity=0.125  Sum_probs=70.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE------------------------EecCCcCc---------
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR------------------------IDSSQFGV---------   50 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~------------------------~~~~~~~~---------   50 (116)
                      ...|.+++|+| +...++....++++.+.... ..++.+                        |.|.....         
T Consensus       120 d~GI~a~~WSP-D~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~  197 (928)
T PF04762_consen  120 DSGILAASWSP-DEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT  197 (928)
T ss_pred             cCcEEEEEECC-CcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence            35789999999 77888888778787776532 222211                        11111000         


Q ss_pred             ---------CCCCceeEEEEcCCCCEEEEEeC------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         51 ---------SGGGGINRVVCHPTLPLTITAHD------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        51 ---------~~~~~i~~~~~~~~~~~~~~~~~------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                               .....-..++|..||.++++.+-      ...+++|+-+ |++......-.+--..++|.|.|+++|+..
T Consensus       198 ~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q  275 (928)
T PF04762_consen  198 VPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQ  275 (928)
T ss_pred             CCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEE
Confidence                     01123457899999999987653      2579999955 776555443444445789999999998764

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=98.37  E-value=0.00011  Score=45.06  Aligned_cols=109  Identities=17%  Similarity=0.201  Sum_probs=69.0

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCC-CceeEE---Ee--cC--CcCcCCCCceeEEEEcCCCCEEEEEe-CC
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLET-GKPVVR---ID--SS--QFGVSGGGGINRVVCHPTLPLTITAH-DD   74 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~---~~--~~--~~~~~~~~~i~~~~~~~~~~~~~~~~-~d   74 (116)
                      .....++++| ++++++++. .++.+.++++.. +.....   +.  +.  ...........++.++|+++++++.. ..
T Consensus        87 ~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~  165 (345)
T PF10282_consen   87 SSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGA  165 (345)
T ss_dssp             SCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred             CCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCC
Confidence            3456788899 677777665 689999999976 432222   11  11  00011245688999999999777654 35


Q ss_pred             CeEEEEECCCCe--EEE--Eee-cccccEEEEEECCCCcEEEeee
Q psy17133         75 RHIRFFDNVSGK--LVH--SMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ~~i~~~~~~~~~--~~~--~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..|.+|++....  +..  .+. ......+.++|+|++++++...
T Consensus       166 D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~  210 (345)
T PF10282_consen  166 DRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVN  210 (345)
T ss_dssp             TEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEE
T ss_pred             CEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEec
Confidence            689999987544  322  222 2345689999999999887654

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>smart00320 WD40 WD40 repeats

Probab=98.35  E-value=5e-06  Score=33.30  Aligned_cols=38  Identities=21%  Similarity=0.364  Sum_probs=31.2

Q ss_pred             ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133         38 KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +....+..+      ...+.++.+.+++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGH------TGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEec------CCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            344555555      56799999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4714|consensus

Probab=98.34  E-value=5.8e-07  Score=52.05  Aligned_cols=74  Identities=18%  Similarity=0.208  Sum_probs=58.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~   82 (116)
                      ..|.+++-+|...+.+++|+++|.+.+||.+... +...++.|      ...+..+.|+|. +..++++++||.+..||-
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ah------k~~i~eV~FHpk~p~~Lft~sedGslw~wda  253 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAH------KAEIWEVHFHPKNPEHLFTCSEDGSLWHWDA  253 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHh------hhhhhheeccCCCchheeEecCCCcEEEEcC
Confidence            3467777778556677888899999999998653 33445666      678999999996 679999999999999996


Q ss_pred             CC
Q psy17133         83 VS   84 (116)
Q Consensus        83 ~~   84 (116)
                      .+
T Consensus       254 s~  255 (319)
T KOG4714|consen  254 ST  255 (319)
T ss_pred             CC
Confidence            63

>KOG1645|consensus

Probab=98.34  E-value=4.7e-06  Score=51.00  Aligned_cols=76  Identities=12%  Similarity=-0.010  Sum_probs=62.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~   81 (116)
                      +...|.+++|+|.+...+..++.+.++.+.|+++...+..+..+       ..+++.+|.-++. +++.|..+|.|.+||
T Consensus       192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-------~~~wSC~wDlde~h~IYaGl~nG~VlvyD  264 (463)
T KOG1645|consen  192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-------NQIWSCCWDLDERHVIYAGLQNGMVLVYD  264 (463)
T ss_pred             cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-------CCceeeeeccCCcceeEEeccCceEEEEE
Confidence            34568899999965557888999999999999988877777766       4799999998765 777788899999999


Q ss_pred             CCCC
Q psy17133         82 NVSG   85 (116)
Q Consensus        82 ~~~~   85 (116)
                      ++..
T Consensus       265 ~R~~  268 (463)
T KOG1645|consen  265 MRQP  268 (463)
T ss_pred             ccCC
Confidence            8753

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.33  E-value=0.00014  Score=44.08  Aligned_cols=111  Identities=13%  Similarity=0.170  Sum_probs=72.7

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC-ceeEEEecCCc---CcCCCCceeEEEEcCCCCEEEEEeC-CCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG-KPVVRIDSSQF---GVSGGGGINRVVCHPTLPLTITAHD-DRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~-~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~   78 (116)
                      .....+.|+| +++++.... .+++|.+|..... .....++....   ..........+.++|+|++|+++.. ...|.
T Consensus       191 ~GPRHi~FHp-n~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~  269 (346)
T COG2706         191 AGPRHIVFHP-NGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA  269 (346)
T ss_pred             CCcceEEEcC-CCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence            4567899999 778776655 5899999988753 22333222111   1111345678999999999988754 34777


Q ss_pred             EEECC--CCeEEE--EeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNV--SGKLVH--SMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~--~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|.+.  ++++..  ....+....+.+.|+|++++|+.+..|
T Consensus       270 ~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~  311 (346)
T COG2706         270 VFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQK  311 (346)
T ss_pred             EEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccC
Confidence            88764  343322  222344457899999999999987654

>KOG3617|consensus

Probab=98.30  E-value=2.1e-06  Score=57.21  Aligned_cols=98  Identities=11%  Similarity=0.114  Sum_probs=73.8

Q ss_pred             eEEEEccCCCcEEEEee----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          8 TSIDFVRDESTKMVTAF----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +-.+|+| ...++++++    ..|.|.||- ++|++.....-       +-.++++||+|..-.++.+=+.|.+.+|...
T Consensus        19 ti~SWHP-sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-------P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~   89 (1416)
T KOG3617|consen   19 TISSWHP-SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-------PVHATSLCWHPEEFVLAQGWEMGVSDVQKTN   89 (1416)
T ss_pred             cccccCC-CCceeEEEEecCCCCceEEEEe-cCCCCCccccc-------ceehhhhccChHHHHHhhccccceeEEEecC
Confidence            3457899 667777665    467788875 34654433321       2347789999998888999889999999987


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+.-.....|...+..+.|+++|..++|+-
T Consensus        90 ~~e~htv~~th~a~i~~l~wS~~G~~l~t~d  120 (1416)
T KOG3617|consen   90 TTETHTVVETHPAPIQGLDWSHDGTVLMTLD  120 (1416)
T ss_pred             CceeeeeccCCCCCceeEEecCCCCeEEEcC
Confidence            7766555667899999999999999998763

>KOG3914|consensus

Probab=98.28  E-value=9.4e-06  Score=49.43  Aligned_cols=63  Identities=24%  Similarity=0.303  Sum_probs=50.8

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      -+.+..++++||+++++++..|..|++-.....-.+..+ .+|..-|..++.-++.. |+++|.|
T Consensus       151 vSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~-LlS~sGD  214 (390)
T KOG3914|consen  151 VSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYL-LLSGSGD  214 (390)
T ss_pred             hhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCce-eeecCCC
Confidence            678999999999999999999999999887655554443 47899999999877654 6666655

>KOG1354|consensus

Probab=98.26  E-value=7e-05  Score=45.39  Aligned_cols=108  Identities=16%  Similarity=0.145  Sum_probs=73.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCc------CCCCceeEEEEcCCCC--EEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGV------SGGGGINRVVCHPTLP--LTITA   71 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~------~~~~~i~~~~~~~~~~--~~~~~   71 (116)
                      .-+.++.|.. .|++|++|..+|.|.++.-....     ....+..|....      .-...|..+.|.+++.  .+...
T Consensus        26 diis~vef~~-~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   26 DIISAVEFDH-YGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             cceeeEEeec-ccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            4478899998 89999999999999998754322     122333332211      1234678899998754  56667


Q ss_pred             eCCCeEEEEECCCCe-----------------------------------EEEEee-cccccEEEEEECCCCcEEEee
Q psy17133         72 HDDRHIRFFDNVSGK-----------------------------------LVHSMV-AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        72 ~~d~~i~~~~~~~~~-----------------------------------~~~~~~-~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ..|.+|++|-+....                                   +.+.+. .|.-.+.+++++.|+..++++
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA  182 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA  182 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence            789999999765321                                   111121 456678999999999988875

>KOG1240|consensus

Probab=98.25  E-value=1.3e-05  Score=55.19  Aligned_cols=78  Identities=10%  Similarity=0.147  Sum_probs=55.6

Q ss_pred             EECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCC-------eEEEEeecccccEEEEEE
Q psy17133         32 FDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSG-------KLVHSMVAHLDAVTSLAV  103 (116)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~-------~~~~~~~~~~~~v~~~~~  103 (116)
                      |..+ |..+..+..|      +..+..++.++. +.++++++.||+|++|+.+.-       +...++.....++..+.+
T Consensus      1034 W~p~-G~lVAhL~Eh------s~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~ 1106 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEH------SSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTM 1106 (1431)
T ss_pred             CCcc-ceEeehhhhc------cccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEe
Confidence            4443 5555555555      556778887765 599999999999999997631       223334334568888999


Q ss_pred             CCCCcEEEeeecC
Q psy17133        104 DPQGLYILSGTYQ  116 (116)
Q Consensus       104 ~~~~~~l~~~s~d  116 (116)
                      .+.+..+|.++.|
T Consensus      1107 ~~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1107 CGNGDQFAVSTKD 1119 (1431)
T ss_pred             ccCCCeEEEEcCC
Confidence            9999999988766

>KOG4532|consensus

Probab=98.24  E-value=0.00012  Score=43.14  Aligned_cols=101  Identities=11%  Similarity=0.118  Sum_probs=66.5

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEEEECCC
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~~~~~~   84 (116)
                      .+..|+. ....++++++|+.+.|||++...... +....++  .|.+.+....|++.|.  +|...-.-+.+.+.|+++
T Consensus       207 F~~S~s~-~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp--~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~  283 (344)
T KOG4532|consen  207 FYNSFSE-NDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRP--HHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRN  283 (344)
T ss_pred             eeeeecc-CcceEEEEecCCcEEEEEecccccchhhhcccCC--CCCCceEEEEecCCCcceEEEEecCcceEEEEEccc
Confidence            5677887 66889999999999999998543322 2211111  1367899999998765  455554567899999998


Q ss_pred             CeEEEEeec-------c-cccEEEEEECCCCcEEE
Q psy17133         85 GKLVHSMVA-------H-LDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        85 ~~~~~~~~~-------~-~~~v~~~~~~~~~~~l~  111 (116)
                      ++-.+.+..       | .+.+..-+|+.++..+.
T Consensus       284 ~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~  318 (344)
T KOG4532|consen  284 YVNHQVIVIPDDVERKHNTQHIFGTNFNNENESND  318 (344)
T ss_pred             CceeeEEecCccccccccccccccccccCCCcccc
Confidence            765544331       1 23466677776655443

>KOG1409|consensus

Probab=98.24  E-value=7.3e-06  Score=49.32  Aligned_cols=78  Identities=9%  Similarity=0.163  Sum_probs=62.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|.+.+.++.|.+ ....+.++..+..+.+||+-.++ ...++.++      ...+..+..-+.-+.+.+++.|+.|.+|
T Consensus       195 ~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh------~~kV~~l~~~~~t~~l~S~~edg~i~~w  267 (404)
T KOG1409|consen  195 GHTGEVTCLKWDP-GQRLLFSGASDHSVIMWDIGGRKGTAYELQGH------NDKVQALSYAQHTRQLISCGEDGGIVVW  267 (404)
T ss_pred             CcccceEEEEEcC-CCcEEEeccccCceEEEeccCCcceeeeeccc------hhhhhhhhhhhhheeeeeccCCCeEEEE
Confidence            3778899999999 77889999999999999997433 23445556      5678888777777889999999999999


Q ss_pred             ECCCCe
Q psy17133         81 DNVSGK   86 (116)
Q Consensus        81 ~~~~~~   86 (116)
                      ++...+
T Consensus       268 ~mn~~r  273 (404)
T KOG1409|consen  268 NMNVKR  273 (404)
T ss_pred             ecccee
Confidence            987543

>KOG1912|consensus

Probab=98.22  E-value=5.7e-05  Score=50.21  Aligned_cols=103  Identities=13%  Similarity=0.205  Sum_probs=76.2

Q ss_pred             CCCCCceEEEEccCC----------C-cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC---CC-C
Q psy17133          2 FYNGTPTSIDFVRDE----------S-TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP---TL-P   66 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~----------~-~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~-~   66 (116)
                      +|...|+.+.|.|-.          . -.|+++...|+|.+||...+..+..+..+      ...+..++|-+   +. .
T Consensus        53 ~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~------~~~~qdl~W~~~rd~Srd  126 (1062)
T KOG1912|consen   53 LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHS------NDSVQDLCWVPARDDSRD  126 (1062)
T ss_pred             cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCC------CcchhheeeeeccCcchh
Confidence            356778888887631          1 14556667899999999988888888777      56788888876   33 4


Q ss_pred             EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEE
Q psy17133         67 LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYI  110 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l  110 (116)
                      +++......++.+|+..+|+.............++.+.| |.+.+
T Consensus       127 ~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~  171 (1062)
T KOG1912|consen  127 VLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHF  171 (1062)
T ss_pred             eeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceE
Confidence            777788889999999999998877664444566788877 54544

>KOG1064|consensus

Probab=98.20  E-value=3.7e-05  Score=55.14  Aligned_cols=104  Identities=16%  Similarity=0.216  Sum_probs=75.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++.=+| ...+.++|+.|+.+++|....++++..+....     +..++...|+.+|.....+..||.+.+|....
T Consensus      2209 ~~v~r~~sHp-~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g-----~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~p 2282 (2439)
T KOG1064|consen 2209 ENVRRMTSHP-SDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAG-----NSRVTRSRFNHQGNKFGIVDGDGDLSLWQASP 2282 (2439)
T ss_pred             CceeeecCCC-CCceEEecCCCceEEEEeccCCCeEEEeeccC-----cchhhhhhhcccCCceeeeccCCceeecccCC
Confidence            4566666677 56788999999999999998888888776542     24566677777777666666677777775432


Q ss_pred             C---------------------------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         85 G---------------------------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        85 ~---------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .                                             ..+.  ..|.+.++++++.|..+.|++|+.+
T Consensus      2283 k~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2283 KPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred             cceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCc
Confidence            1                                             1222  4578889999999999999999864

>KOG4714|consensus

Probab=98.18  E-value=2.1e-06  Score=49.83  Aligned_cols=62  Identities=15%  Similarity=0.248  Sum_probs=50.0

Q ss_pred             ceeEEEEcCCC-CEEEEEeCCCeEEEEECCCCeEE-EEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         55 GINRVVCHPTL-PLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        55 ~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      .+.+++-+|.. .++++|++||.+.+||.++.... ..+..|+..++.+-|+| ++..|++++.|
T Consensus       181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sed  245 (319)
T KOG4714|consen  181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSED  245 (319)
T ss_pred             cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCC
Confidence            48889999975 57788999999999999877443 34567899999999998 56788888765

>KOG2066|consensus

Probab=98.17  E-value=0.00012  Score=48.57  Aligned_cols=90  Identities=14%  Similarity=0.115  Sum_probs=63.4

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-----CCEEEEEeCCCeEEEEECC--CCeEE
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-----LPLTITAHDDRHIRFFDNV--SGKLV   88 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~d~~i~~~~~~--~~~~~   88 (116)
                      +|.++++++.||++.|-.+.+.+....+.-+       .++.+++++|+     .+.+++|+..| +.++.-.  ..+..
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~-------rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~  153 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFK-------RPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS  153 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEecC-------CcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc
Confidence            4899999999999999998887776666655       46899999997     45788888888 7666521  11111


Q ss_pred             EEeecccccEEEEEECCCCcEEEeeec
Q psy17133         89 HSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        89 ~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+....+.|.+++|.  |.++|-++.
T Consensus       154 v~l~~~eG~I~~i~W~--g~lIAWand  178 (846)
T KOG2066|consen  154 VVLSEGEGPIHSIKWR--GNLIAWAND  178 (846)
T ss_pred             eeeecCccceEEEEec--CcEEEEecC
Confidence            1344457789999884  446655443

>KOG1354|consensus

Probab=98.15  E-value=1.6e-05  Score=48.04  Aligned_cols=109  Identities=16%  Similarity=0.175  Sum_probs=73.3

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCc------eeEEEecCCcCc----CCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGK------PVVRIDSSQFGV----SGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~------~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      .|++..|+|...++++.++..|.|++-|++...      .+.+.+......    .--..|..+.|+++|+++++-. =.
T Consensus       215 VITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yl  293 (433)
T KOG1354|consen  215 VITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YL  293 (433)
T ss_pred             HHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cc
Confidence            467888999878899999999999999997321      122211110000    1123577899999999998863 25


Q ss_pred             eEEEEEC-CCCeEEEEeeccc------------cc---EEEEEECCCCcEEEeeec
Q psy17133         76 HIRFFDN-VSGKLVHSMVAHL------------DA---VTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        76 ~i~~~~~-~~~~~~~~~~~~~------------~~---v~~~~~~~~~~~l~~~s~  115 (116)
                      +|++||+ ...+.+..+..|.            ..   -..++|+.++.+++|||.
T Consensus       294 tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy  349 (433)
T KOG1354|consen  294 TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSY  349 (433)
T ss_pred             eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccc
Confidence            8999998 3455555444331            12   256789999999999885

>KOG1064|consensus

Probab=98.12  E-value=3.7e-06  Score=59.78  Aligned_cols=86  Identities=17%  Similarity=0.227  Sum_probs=62.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-----------------------------------
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-----------------------------------   49 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-----------------------------------   49 (116)
                      .+|+.+.|+. +|+.+..+..||.+.+|... .++....++|...                                   
T Consensus      2252 s~vtr~~f~~-qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s 2329 (2439)
T KOG1064|consen 2252 SRVTRSRFNH-QGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNS 2329 (2439)
T ss_pred             chhhhhhhcc-cCCceeeeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccc
Confidence            5566777776 67777777778888888765 2222222222211                                   


Q ss_pred             ---cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         50 ---VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        50 ---~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                         .+|.+.++++++.|...++++|+.+|.+++||++..++++.+.
T Consensus      2330 ~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2330 LVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred             eeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhh
Confidence               1678889999999999999999999999999998776665543

>KOG1409|consensus

Probab=98.12  E-value=6.9e-05  Score=45.32  Aligned_cols=66  Identities=17%  Similarity=0.184  Sum_probs=48.1

Q ss_pred             CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE-EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL-VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|...+.+..|.|....+.++..|..+.+||+.-++- ...+.+|...|+.++..+.-+.+.+++.|
T Consensus       195 ~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~ed  261 (404)
T KOG1409|consen  195 GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGED  261 (404)
T ss_pred             CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCC
Confidence            4577899999999999999999999999999974433 23345666666666665555555555443

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.10  E-value=0.00018  Score=49.54  Aligned_cols=100  Identities=12%  Similarity=0.137  Sum_probs=69.7

Q ss_pred             CceEEEEccCCCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCe
Q psy17133          6 TPTSIDFVRDESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~   76 (116)
                      .-..++|.. ||.++++++.      .+.+++|+-+ |......+.-      .+--..++|.|.|.++|+...   ...
T Consensus       211 ~~~~ISWRG-DG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v------~gLe~~l~WrPsG~lIA~~q~~~~~~~  282 (928)
T PF04762_consen  211 GRVRISWRG-DGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPV------DGLEGALSWRPSGNLIASSQRLPDRHD  282 (928)
T ss_pred             CceEEEECC-CCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccC------CCccCCccCCCCCCEEEEEEEcCCCcE
Confidence            445789998 8899988763      2578999976 6544444422      344567899999999998764   345


Q ss_pred             EEEEECCCCeEEEEee----cccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKLVHSMV----AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.+|+ ++|-.-..+.    .....+..+.|++|+..|+..-
T Consensus       283 VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~  323 (928)
T PF04762_consen  283 VVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWL  323 (928)
T ss_pred             EEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEe
Confidence            66666 4554433332    3456789999999999998644

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.06  E-value=8.2e-05  Score=46.88  Aligned_cols=100  Identities=14%  Similarity=0.161  Sum_probs=61.3

Q ss_pred             CceEEEEccCCCcEEEEe-eCCCe--EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--eEEE
Q psy17133          6 TPTSIDFVRDESTKMVTA-FDNSA--CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--HIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~-~~~~~--v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~i~~   79 (116)
                      .-....|+| ++++++.. ..++.  ++++|+..++ +..+...      .+.-..-.|+|||+.++..++ .|  .|.+
T Consensus       239 ~~~~P~fsp-DG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~------~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~  310 (425)
T COG0823         239 NNGAPAFSP-DGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNG------FGINTSPSWSPDGSKIVFTSDRGGRPQIYL  310 (425)
T ss_pred             ccCCccCCC-CCCEEEEEECCCCCccEEEEcCCCCc-ceecccC------CccccCccCCCCCCEEEEEeCCCCCcceEE
Confidence            344568999 56666554 44554  6667777555 3334433      233347789999998876654 33  4777


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+.+...+... ....-..-.|+|+|++|+..+
T Consensus       311 ~~~~g~~~~riT~-~~~~~~~p~~SpdG~~i~~~~  344 (425)
T COG0823         311 YDLEGSQVTRLTF-SGGGNSNPVWSPDGDKIVFES  344 (425)
T ss_pred             ECCCCCceeEeec-cCCCCcCccCCCCCCEEEEEe
Confidence            7777665533332 222223678899999988654

>KOG2041|consensus

Probab=98.04  E-value=1.3e-05  Score=52.85  Aligned_cols=102  Identities=6%  Similarity=-0.062  Sum_probs=75.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.-+.|+- +.+.|.++..+|-|.+|-+-.++...++...+.    .+.|.+++|+.+|..++....||.|.+=.
T Consensus        69 GH~~sV~vvTWNe-~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRn----KSvV~SmsWn~dG~kIcIvYeDGavIVGs  143 (1189)
T KOG2041|consen   69 GHNASVMVVTWNE-NNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRN----KSVVVSMSWNLDGTKICIVYEDGAVIVGS  143 (1189)
T ss_pred             cCcceEEEEEecc-ccccccccCCCceEEEEeeecccHHHHHhhCcC----ccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence            3778899999987 668888888999999999988877666665543    56799999999999999999999998887


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcE
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLY  109 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~  109 (116)
                      ++..+.... .-.......+.|++|.+.
T Consensus       144 vdGNRIwgK-eLkg~~l~hv~ws~D~~~  170 (1189)
T KOG2041|consen  144 VDGNRIWGK-ELKGQLLAHVLWSEDLEQ  170 (1189)
T ss_pred             eccceecch-hcchheccceeecccHHH
Confidence            763322111 111123345677777553

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.04  E-value=0.00071  Score=41.02  Aligned_cols=103  Identities=17%  Similarity=0.154  Sum_probs=68.6

Q ss_pred             CceEEEEccCCCcEEEEe-eCCCeEEEEECCC--Cc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-eEE
Q psy17133          6 TPTSIDFVRDESTKMVTA-FDNSACVLFDLET--GK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-HIR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~--~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-~i~   78 (116)
                      ..+.++|+| +++.+..+ +..+.++.|++..  +.   ....+.....    .+..-.++...+|.+.+++...+ .|.
T Consensus       164 ~~NGla~Sp-Dg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~----~G~PDG~~vDadG~lw~~a~~~g~~v~  238 (307)
T COG3386         164 IPNGLAFSP-DGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEE----PGLPDGMAVDADGNLWVAAVWGGGRVV  238 (307)
T ss_pred             ecCceEECC-CCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCC----CCCCCceEEeCCCCEEEecccCCceEE
Confidence            457899999 55555444 5568888887752  21   1111111111    45677889999999886665554 899


Q ss_pred             EEECCCCeEEEEeecccccEEEEEEC-CCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s  114 (116)
                      .|+.+ ++++..+......+++++|- |+.+.|+..+
T Consensus       239 ~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         239 RFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             EECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            99988 99988887665778888884 5666665443

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.02  E-value=9.1e-05  Score=45.59  Aligned_cols=82  Identities=13%  Similarity=0.195  Sum_probs=53.8

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cc----------
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AH----------   94 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~----------   94 (116)
                      .+.+.++|+++++.......       ...+....|+|+|+.++... ++.|.+.+..+++..+.-. +.          
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~-------~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dw   93 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP-------PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDW   93 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E-------ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--H
T ss_pred             ceeEEEEecCCCceEECcCC-------ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccce
Confidence            35688999987654332222       24688999999999888875 5789999988775443322 10          


Q ss_pred             ------cccEEEEEECCCCcEEEeeec
Q psy17133         95 ------LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        95 ------~~~v~~~~~~~~~~~l~~~s~  115 (116)
                            -+.-..+-|+||+++|+....
T Consensus        94 vyeEEv~~~~~~~~WSpd~~~la~~~~  120 (353)
T PF00930_consen   94 VYEEEVFDRRSAVWWSPDSKYLAFLRF  120 (353)
T ss_dssp             HHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred             eccccccccccceEECCCCCEEEEEEE
Confidence                  112356789999999987543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.02  E-value=3.6e-05  Score=48.53  Aligned_cols=96  Identities=13%  Similarity=0.119  Sum_probs=71.2

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----------
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----------   74 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----------   74 (116)
                      ++....|+| .|.++++... ..|.+|.-.....+..+...        .+..+.|+|.+++|.+-+..           
T Consensus        34 p~~~~~~SP-~G~~l~~~~~-~~V~~~~g~~~~~l~~~~~~--------~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp  103 (561)
T COG5354          34 PVAYVSESP-LGTYLFSEHA-AGVECWGGPSKAKLVRFRHP--------DVKYLDFSPNEKYLVTWSREPIIEPEIEISP  103 (561)
T ss_pred             chhheeecC-cchheehhhc-cceEEccccchhheeeeecC--------CceecccCcccceeeeeccCCccChhhccCC
Confidence            466788999 7788877654 46889988776666666644        68999999999999986543           


Q ss_pred             ----CeEEEEECCCCeEEEEeeccccc--EE-EEEECCCCcEEE
Q psy17133         75 ----RHIRFFDNVSGKLVHSMVAHLDA--VT-SLAVDPQGLYIL  111 (116)
Q Consensus        75 ----~~i~~~~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~  111 (116)
                          +.+.+||+.++..+..+.....+  .+ -+.|+-+.++.+
T Consensus       104 ~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~A  147 (561)
T COG5354         104 FTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVA  147 (561)
T ss_pred             ccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhh
Confidence                35999999999998887754443  33 567777766543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.01  E-value=0.00035  Score=48.82  Aligned_cols=80  Identities=13%  Similarity=0.084  Sum_probs=58.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCc--------CcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF--------GVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      .+..+++++ +++.+++...++.|++||..++... .+.+...        ....-.....++++++|+++++-..++.|
T Consensus       805 ~P~Gvavd~-dG~LYVADs~N~rIrviD~~tg~v~-tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I  882 (1057)
T PLN02919        805 HPLGVLCAK-DGQIYVADSYNHKIKKLDPATKRVT-TLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI  882 (1057)
T ss_pred             CCceeeEeC-CCcEEEEECCCCEEEEEECCCCeEE-EEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence            356888998 7788888888999999999866543 3322100        00012356789999999988888889999


Q ss_pred             EEEECCCCeE
Q psy17133         78 RFFDNVSGKL   87 (116)
Q Consensus        78 ~~~~~~~~~~   87 (116)
                      ++||+.+++.
T Consensus       883 rvid~~~~~~  892 (1057)
T PLN02919        883 RYLDLNKGEA  892 (1057)
T ss_pred             EEEECCCCcc
Confidence            9999988764

>KOG0309|consensus

Probab=98.01  E-value=1.7e-05  Score=52.36  Aligned_cols=97  Identities=16%  Similarity=0.220  Sum_probs=72.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |...|+++.|.|.....+++++.+..+..||+.+.. +...+..-      ......+.|+-...-+.+.+..+.+++||
T Consensus       113 hsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w------~s~asqVkwnyk~p~vlasshg~~i~vwd  186 (1081)
T KOG0309|consen  113 HSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSW------RSAASQVKWNYKDPNVLASSHGNDIFVWD  186 (1081)
T ss_pred             CccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecc------cccCceeeecccCcchhhhccCCceEEEe
Confidence            678899999999888899999999999999998643 44444333      34577889987655555555677899999


Q ss_pred             CCCC-eEEEEeecccccEEEEEECC
Q psy17133         82 NVSG-KLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        82 ~~~~-~~~~~~~~~~~~v~~~~~~~  105 (116)
                      .+.| ..+..+++|...+..+.|+.
T Consensus       187 ~r~gs~pl~s~K~~vs~vn~~~fnr  211 (1081)
T KOG0309|consen  187 LRKGSTPLCSLKGHVSSVNSIDFNR  211 (1081)
T ss_pred             ccCCCcceEEecccceeeehHHHhh
Confidence            9755 45667777777777776654

>KOG2066|consensus

Probab=97.98  E-value=3.8e-05  Score=50.79  Aligned_cols=94  Identities=13%  Similarity=0.098  Sum_probs=68.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.+++++.   .+++.|.-+|.+++++.. +.. .....+.      ..      ..+|.++++++.||++.+..+.
T Consensus        39 ~D~is~~av~~---~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s------~~------~~~Gey~asCS~DGkv~I~sl~  101 (846)
T KOG2066|consen   39 NDAISCCAVHD---KFFALGTHRGAVYLTTCQ-GNP-KTNFDHS------SS------ILEGEYVASCSDDGKVVIGSLF  101 (846)
T ss_pred             hhHHHHHHhhc---ceeeeccccceEEEEecC-Ccc-ccccccc------cc------ccCCceEEEecCCCcEEEeecc
Confidence            34455555543   788889989999999986 444 3333441      11      6679999999999999999988


Q ss_pred             CCeEEEEeecccccEEEEEECCC-----CcEEEeeec
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQ-----GLYILSGTY  115 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~s~  115 (116)
                      +.+...++. ...++.+++++|+     .+.+++|+.
T Consensus       102 ~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~  137 (846)
T KOG2066|consen  102 TDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGM  137 (846)
T ss_pred             CCccceeEe-cCCcceeEEeccchhhhhhhheeecCc
Confidence            887776665 3457889999998     456666653

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.97  E-value=0.0002  Score=48.21  Aligned_cols=95  Identities=15%  Similarity=0.250  Sum_probs=60.7

Q ss_pred             cEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         18 TKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      ...+.|-.+..+..||.+- +..+..-..+..  .......+++-..+| .+|.|+.+|.|++||--..+....+.+-..
T Consensus       543 e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y--~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~  619 (794)
T PF08553_consen  543 EQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQY--SSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGD  619 (794)
T ss_pred             CceEEEECCCceEEeccCCCCCceeecccccc--ccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCC
Confidence            3445566677899999874 332222122111  002345666655555 688999999999999432232333445567


Q ss_pred             cEEEEEECCCCcEEEeeec
Q psy17133         97 AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s~  115 (116)
                      +|..+..+.||+|++..+.
T Consensus       620 pI~~iDvt~DGkwilaTc~  638 (794)
T PF08553_consen  620 PIIGIDVTADGKWILATCK  638 (794)
T ss_pred             CeeEEEecCCCcEEEEeec
Confidence            9999999999999887653

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=97.96  E-value=0.00056  Score=43.49  Aligned_cols=98  Identities=14%  Similarity=0.167  Sum_probs=67.5

Q ss_pred             CCCceEEEEccCCCcEEEEe--eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTA--FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIR   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~   78 (116)
                      .++|....|.| .++.+++.  ...-.+.++|+.. +.+..+...        .-+.+.|+|.+++++.++-+   |.+.
T Consensus       274 ~~pVhdf~W~p-~S~~F~vi~g~~pa~~s~~~lr~-Nl~~~~Pe~--------~rNT~~fsp~~r~il~agF~nl~gni~  343 (561)
T COG5354         274 KDPVHDFTWEP-LSSRFAVISGYMPASVSVFDLRG-NLRFYFPEQ--------KRNTIFFSPHERYILFAGFDNLQGNIE  343 (561)
T ss_pred             cccceeeeecc-cCCceeEEecccccceeeccccc-ceEEecCCc--------ccccccccCcccEEEEecCCccccceE
Confidence            57899999999 55554443  4677889999974 444444432        45677799999999887765   6799


Q ss_pred             EEECCCCeEEE-EeecccccEEEEEECCCCcEEEee
Q psy17133         79 FFDNVSGKLVH-SMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +|+........ .+.+  ...+-+.|+|+++++.+.
T Consensus       344 i~~~~~rf~~~~~~~~--~n~s~~~wspd~qF~~~~  377 (561)
T COG5354         344 IFDPAGRFKVAGAFNG--LNTSYCDWSPDGQFYDTD  377 (561)
T ss_pred             EeccCCceEEEEEeec--CCceEeeccCCceEEEec
Confidence            99987544433 3432  234557899999988654

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.96  E-value=0.001  Score=40.10  Aligned_cols=96  Identities=19%  Similarity=0.241  Sum_probs=69.7

Q ss_pred             EEEccCCCcEEEEee-----CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------
Q psy17133         10 IDFVRDESTKMVTAF-----DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----------   73 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~-----~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------   73 (116)
                      -.|++ ++++|++.-     ..|.|-+||.. +-+.+.++..+      .-....+.+.||++.|+.+..          
T Consensus        56 g~fs~-dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~------GIGPHel~l~pDG~tLvVANGGI~Thpd~GR  128 (305)
T PF07433_consen   56 GVFSP-DGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSH------GIGPHELLLMPDGETLVVANGGIETHPDSGR  128 (305)
T ss_pred             EEEcC-CCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCC------CcChhhEEEcCCCCEEEEEcCCCccCcccCc
Confidence            46888 788887753     24779999998 56778888877      334678889999977766532          


Q ss_pred             --------CCeEEEEECCCCeEEEEee----cccccEEEEEECCCCcEEEe
Q psy17133         74 --------DRHIRFFDNVSGKLVHSMV----AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        74 --------d~~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~  112 (116)
                              +-.+...|..+|+++.+..    .|...++.+++.++|..++.
T Consensus       129 ~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a  179 (305)
T PF07433_consen  129 AKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFA  179 (305)
T ss_pred             eecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEE
Confidence                    1236666778888877643    35668999999999887654

>smart00320 WD40 WD40 repeats

Probab=97.95  E-value=3.1e-05  Score=30.79  Aligned_cols=30  Identities=27%  Similarity=0.427  Sum_probs=26.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFD   33 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~   33 (116)
                      |...+.++.|.+ ++..+++++.++.+++|+
T Consensus        11 ~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320       11 HTGPVTSVAFSP-DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             cCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence            567899999998 668999999999999986

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.93  E-value=0.00046  Score=43.87  Aligned_cols=49  Identities=24%  Similarity=0.230  Sum_probs=33.4

Q ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |.++...+.+ .|.+||+++++.++.+...  .|..+.|++++.+++..+.|
T Consensus       117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~  165 (443)
T PF04053_consen  117 GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD  165 (443)
T ss_dssp             SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-
T ss_pred             CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC
Confidence            7767666544 8999999999999988633  48999999999999877653

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG4190|consensus

Probab=97.89  E-value=2.2e-05  Score=50.43  Aligned_cols=80  Identities=15%  Similarity=0.246  Sum_probs=58.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-Cc------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GK------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      |...|..+.--. +.+-+++++.|.+|++|.+.. +.      ...++..|      ...|.++.|-.+-+.++++  |+
T Consensus       734 H~~~iRai~Aid-NENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aH------kk~i~~igfL~~lr~i~Sc--D~  804 (1034)
T KOG4190|consen  734 HQEKIRAIAAID-NENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAH------KKPIHDIGFLADLRSIASC--DG  804 (1034)
T ss_pred             cHHHhHHHHhcc-cccceeeccCCceEEEEEeccccCccccceeeeEhhhc------cCcccceeeeeccceeeec--cC
Confidence            445555555443 668889999999999999863 22      34455555      6789999998888877766  78


Q ss_pred             eEEEEECCCCeEEEEe
Q psy17133         76 HIRFFDNVSGKLVHSM   91 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~   91 (116)
                      -|.+||.--++.+.++
T Consensus       805 giHlWDPFigr~Laq~  820 (1034)
T KOG4190|consen  805 GIHLWDPFIGRLLAQM  820 (1034)
T ss_pred             cceeecccccchhHhh
Confidence            8999998777766544

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.88  E-value=0.00013  Score=31.55  Aligned_cols=33  Identities=12%  Similarity=0.200  Sum_probs=29.2

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ...|..++|+|+..++|.+..+|.|.++.+ +++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q   43 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ   43 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence            356899999999999999999999999998 444

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.86  E-value=0.00044  Score=43.72  Aligned_cols=100  Identities=19%  Similarity=0.207  Sum_probs=61.5

Q ss_pred             CceEEEEccCCCcEEEEe-eC--C-CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCe--EE
Q psy17133          6 TPTSIDFVRDESTKMVTA-FD--N-SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRH--IR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~-~~--~-~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~--i~   78 (116)
                      .+..-.|+| ++..++.- ..  . ..++++++++++........       +.-...+|+|||+.++. ...|+.  |.
T Consensus       194 ~~~~p~ws~-~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~-------g~~~~P~fspDG~~l~f~~~rdg~~~iy  265 (425)
T COG0823         194 LILTPAWSP-DGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN-------GNNGAPAFSPDGSKLAFSSSRDGSPDIY  265 (425)
T ss_pred             ceeccccCc-CCCceEEEEEecCCCceEEEEeccCCccceeeccC-------CccCCccCCCCCCEEEEEECCCCCccEE
Confidence            345567888 55554433 22  2 45889999877654444322       23456789999986654 444554  66


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.|+..+...+ +....+.-..-.|+|||++++-.+
T Consensus       266 ~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~S  300 (425)
T COG0823         266 LMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTS  300 (425)
T ss_pred             EEcCCCCccee-cccCCccccCccCCCCCCEEEEEe
Confidence            67877666433 433333334678999999988654

>KOG4649|consensus

Probab=97.86  E-value=0.00083  Score=39.66  Aligned_cols=83  Identities=13%  Similarity=0.046  Sum_probs=59.6

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      +++++.|..++.+++.+.++|.+...+....      ..-......+++.++..++.|+....-|.++...+...+...+
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~------~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~  136 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILE------TVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGG  136 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehh------hhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCc
Confidence            4677888889999999999998777766541      1122345678899999999999999999998877776553333


Q ss_pred             cEEEEEECC
Q psy17133         97 AVTSLAVDP  105 (116)
Q Consensus        97 ~v~~~~~~~  105 (116)
                      ...+-+..|
T Consensus       137 ~f~sP~i~~  145 (354)
T KOG4649|consen  137 TFVSPVIAP  145 (354)
T ss_pred             eeccceecC
Confidence            333444555

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.84  E-value=0.0008  Score=44.24  Aligned_cols=103  Identities=11%  Similarity=0.091  Sum_probs=68.1

Q ss_pred             CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce------------eEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP------------VVRIDSSQFGVSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      ...+..+.++| +++++++++ .+..+.+.|+.+.+.            +.+.+..       ......+|.++|....+
T Consensus       320 GKsPHGV~vSP-DGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG-------lGPLHTaFDg~G~ayts  391 (635)
T PRK02888        320 PKNPHGVNTSP-DGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG-------LGPLHTAFDGRGNAYTT  391 (635)
T ss_pred             CCCccceEECC-CCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC-------CCcceEEECCCCCEEEe
Confidence            35567899999 677766555 588999999986543            2222221       23456778889888888


Q ss_pred             EeCCCeEEEEECCC----------CeEEEEeecccccEEEE-----EECCCCcEEEeee
Q psy17133         71 AHDDRHIRFFDNVS----------GKLVHSMVAHLDAVTSL-----AVDPQGLYILSGT  114 (116)
Q Consensus        71 ~~~d~~i~~~~~~~----------~~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~s  114 (116)
                      .--|..|..|++.+          ...+..+.-|.+.....     .-.|+|+||++.+
T Consensus       392 lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        392 LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN  450 (635)
T ss_pred             EeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence            88899999999876          23344444343322222     2368899998764

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.83  E-value=0.00015  Score=31.36  Aligned_cols=34  Identities=3%  Similarity=0.155  Sum_probs=29.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP   39 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~   39 (116)
                      ...|..++|+| ..+.++.+..+|+|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P-~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCP-TMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECC-CCCEEEEEECCCeEEEEEC-CCcC
Confidence            35688999999 8899999999999999998 4543

>KOG2079|consensus

Probab=97.82  E-value=0.00014  Score=49.81  Aligned_cols=90  Identities=17%  Similarity=0.226  Sum_probs=61.7

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA   97 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~   97 (116)
                      ..++.++..+.+...|+... .-....+...    .++|++++++.+|+.++.|-.+|.|.+||+..++.++.+..+..+
T Consensus       100 ~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v----~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap  174 (1206)
T KOG2079|consen  100 VPIVIGTSHGHVLLSDMTGN-LGPLHQNERV----QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAP  174 (1206)
T ss_pred             eeEEEEcCchhhhhhhhhcc-cchhhcCCcc----CCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCc
Confidence            45777777888888777532 1111122222    578999999999999999999999999999998888887655544


Q ss_pred             EEEE---EECCCCcEEEe
Q psy17133         98 VTSL---AVDPQGLYILS  112 (116)
Q Consensus        98 v~~~---~~~~~~~~l~~  112 (116)
                      ...+   .+..++..+++
T Consensus       175 ~t~vi~v~~t~~nS~llt  192 (1206)
T KOG2079|consen  175 VTGVIFVGRTSQNSKLLT  192 (1206)
T ss_pred             cceEEEEEEeCCCcEEEE
Confidence            4333   33444444443

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=97.77  E-value=0.0013  Score=40.80  Aligned_cols=71  Identities=8%  Similarity=0.122  Sum_probs=44.6

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL   95 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~   95 (116)
                      ..+++++.++.++.+|..+++.+.......     ........+  .+..++.++.++.+.++|..+++.+..+..+.
T Consensus       280 ~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~-----~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~  350 (377)
T TIGR03300       280 NRLYVTDADGVVVALDRRSGSELWKNDELK-----YRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDG  350 (377)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEcccccc-----CCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCC
Confidence            455555667777777777666554432110     011111111  35678888899999999999999988776444

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1912|consensus

Probab=97.70  E-value=0.00021  Score=47.71  Aligned_cols=91  Identities=16%  Similarity=0.166  Sum_probs=71.9

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC------------CCEEEEEeC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT------------LPLTITAHD   73 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~   73 (116)
                      .-.+++|+| . ..++.|+ ...|.+-|..+-+.+..++.|      +..|+.+.|.|.            ...++++.-
T Consensus        17 N~~A~Dw~~-~-GLiAygs-hslV~VVDs~s~q~iqsie~h------~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~   87 (1062)
T KOG1912|consen   17 NRNAADWSP-S-GLIAYGS-HSLVSVVDSRSLQLIQSIELH------QSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI   87 (1062)
T ss_pred             cccccccCc-c-ceEEEec-CceEEEEehhhhhhhhccccC------ccceeEEEeccCCCchhccCccccceeEEeccc
Confidence            346778887 3 5677766 557889999988889999888      678999999862            125667777


Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      .|.|.+||...+..+..+..+...+..++|-+
T Consensus        88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~  119 (1062)
T KOG1912|consen   88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVP  119 (1062)
T ss_pred             cCcEEEEEehhhhhhhhhcCCCcchhheeeee
Confidence            89999999998888888888888899998854

>KOG3621|consensus

Probab=97.68  E-value=0.00021  Score=46.92  Aligned_cols=79  Identities=8%  Similarity=-0.039  Sum_probs=57.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+..+..++ +..+++.|+..+.|.++.+....+............|...|++++|++++..+++|...|+|.+-.+.+
T Consensus        77 ~~~~~~~vs~-~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen   77 GITCVRSVSS-VEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             ceEEEEEecc-hhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            4455666777 667888889999999998875433222111111122467899999999999999999999999888776

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.67  E-value=0.0032  Score=37.14  Aligned_cols=103  Identities=15%  Similarity=0.172  Sum_probs=66.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++.|.|+++.++++....+.|..++.. |+.+..+.-..     .+....+++.-++.++++.-.++.+.++++..
T Consensus        22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g-----~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~   95 (248)
T PF06977_consen   22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG-----FGDYEGITYLGNGRYVLSEERDQRLYIFTIDD   95 (248)
T ss_dssp             S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS------SSEEEEEE-STTEEEEEETTTTEEEEEEE--
T ss_pred             CCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC-----CCCceeEEEECCCEEEEEEcCCCcEEEEEEec
Confidence            3588999999656677777888999999975 78888776542     25688899988887777776689999998732


Q ss_pred             C------eEEEEee-----cccccEEEEEECCCCcEEEee
Q psy17133         85 G------KLVHSMV-----AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~------~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .      .....+.     .+...+-.++|+|.++.|+.+
T Consensus        96 ~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~  135 (248)
T PF06977_consen   96 DTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVA  135 (248)
T ss_dssp             --TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEE
T ss_pred             cccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEE
Confidence            1      1112222     234468899999987766654

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.67  E-value=0.0035  Score=37.61  Aligned_cols=102  Identities=17%  Similarity=0.136  Sum_probs=65.0

Q ss_pred             EEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEEC
Q psy17133          9 SIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDN   82 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~   82 (116)
                      .+.|+|.-+.-++.+-.-++ ..++|..+.+....+.....    ....--=.|+|||.+++..-+|     |.|-+||.
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~----RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~  147 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEG----RHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA  147 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccC----ceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence            45666643444455544444 55788887766655544321    1122234589999999876554     78999998


Q ss_pred             CCCe-EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         83 VSGK-LVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        83 ~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..+- .+..+..|.-....+.+.+||+.++.+.
T Consensus       148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             ccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence            7442 2344556666677889999999988654

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.67  E-value=0.0015  Score=43.04  Aligned_cols=95  Identities=12%  Similarity=0.112  Sum_probs=55.1

Q ss_pred             CCceEEEEccCCCcEEEEee------CCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C
Q psy17133          5 GTPTSIDFVRDESTKMVTAF------DNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R   75 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~------~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~   75 (116)
                      ..+.+.+.+| +++.++...      .+.  .+.+++. .+.......+.        ......|+|+|..+++.... .
T Consensus       350 ~~vsspaiSp-dG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--------~~t~PsWspDG~~lw~v~dg~~  419 (591)
T PRK13616        350 GNITSAALSR-SGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--------SLTRPSWSLDADAVWVVVDGNT  419 (591)
T ss_pred             cCcccceECC-CCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--------CCCCceECCCCCceEEEecCcc
Confidence            3567788999 667665543      233  4555554 23332222222        37788999998877666432 2


Q ss_pred             -----------eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         76 -----------HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        76 -----------~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                                 .+.+.++..++...   .....|..+.|+|||..++.
T Consensus       420 ~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~  464 (591)
T PRK13616        420 VVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAM  464 (591)
T ss_pred             eEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEE
Confidence                       23333333332222   12457999999999998774

>KOG1832|consensus

Probab=97.62  E-value=0.00037  Score=47.47  Aligned_cols=44  Identities=14%  Similarity=0.216  Sum_probs=37.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ   47 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~   47 (116)
                      ++...++++|+. +.+.|++|+-.|.|+++++.+|.......+|.
T Consensus      1100 ~~~~fTc~afs~-~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~ 1143 (1516)
T KOG1832|consen 1100 ETALFTCIAFSG-GTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQ 1143 (1516)
T ss_pred             cccceeeEEeec-CCceEEeeeccceEEEEEccCccccccccccc
Confidence            345678999998 77999999999999999999998888887773

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.61  E-value=0.004  Score=41.15  Aligned_cols=82  Identities=13%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---------------------------------
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---------------------------------   72 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------------------------   72 (116)
                      .+.+.+.|.++.+....+...       +....+.++|+++++++.+                                 
T Consensus       214 ~~~vSvID~etmeV~~qV~Vd-------gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vk  286 (635)
T PRK02888        214 RSLFTAVDAETMEVAWQVMVD-------GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVK  286 (635)
T ss_pred             eEEEEEEECccceEEEEEEeC-------CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhh
Confidence            455667777776665555543       2344566677777665553                                 


Q ss_pred             -------CCCeEEEEECCC-----CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         73 -------DDRHIRFFDNVS-----GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        73 -------~d~~i~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                             .++.|.+.|..+     .+.+..+. -......+.++|||++++.++.
T Consensus       287 dGK~~~V~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVank  340 (635)
T PRK02888        287 AGKFKTIGGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGK  340 (635)
T ss_pred             CCCEEEECCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCC
Confidence                   235577788776     23444443 3446788999999999987654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.59  E-value=0.0055  Score=38.64  Aligned_cols=98  Identities=14%  Similarity=0.111  Sum_probs=59.5

Q ss_pred             eEEEEccCCCcEEEEe-eCC----CeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-------
Q psy17133          8 TSIDFVRDESTKMVTA-FDN----SACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDD-------   74 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~-~~~----~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-------   74 (116)
                      ..+.++| ++++++.+ +..    ..++++|+.+++.+... ...        ....+.|.++++.++....+       
T Consensus       127 ~~~~~Sp-dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--------~~~~~~W~~d~~~~~y~~~~~~~~~~~  197 (414)
T PF02897_consen  127 GGFSVSP-DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--------KFSSVSWSDDGKGFFYTRFDEDQRTSD  197 (414)
T ss_dssp             EEEEETT-TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--------ESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred             eeeeECC-CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--------ccceEEEeCCCCEEEEEEeCccccccc
Confidence            3577899 77777654 332    45999999998765432 222        22349999998866554322       


Q ss_pred             ----CeEEEEECCCCeE--EEEeecccc-c-EEEEEECCCCcEEEeee
Q psy17133         75 ----RHIRFFDNVSGKL--VHSMVAHLD-A-VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ----~~i~~~~~~~~~~--~~~~~~~~~-~-v~~~~~~~~~~~l~~~s  114 (116)
                          ..|+.|.+.+...  ...+..... . ...+..++++++++..+
T Consensus       198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~  245 (414)
T PF02897_consen  198 SGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISS  245 (414)
T ss_dssp             CGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEE
T ss_pred             CCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEE
Confidence                2477888766532  233333222 2 56788899999987543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG1645|consensus

Probab=97.54  E-value=0.00055  Score=42.40  Aligned_cols=60  Identities=20%  Similarity=0.146  Sum_probs=49.5

Q ss_pred             CCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         53 GGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        53 ~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ...|.+++++|... ++..++.+++|++.|+++......+..+ ..+++++|..+....+-+
T Consensus       193 g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa  253 (463)
T KOG1645|consen  193 GSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA  253 (463)
T ss_pred             chhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence            56789999999877 6778889999999999999888888766 679999999876654433

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=97.54  E-value=0.0051  Score=35.98  Aligned_cols=96  Identities=19%  Similarity=0.207  Sum_probs=62.7

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc-CCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH-PTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      .+..|.+.++.++++....+.|+.|+..++.. ..+...        ....+.+. +++.++++. .. .+.++|..+++
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~-~~~~~~--------~~~G~~~~~~~g~l~v~~-~~-~~~~~d~~~g~   71 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEV-EVIDLP--------GPNGMAFDRPDGRLYVAD-SG-GIAVVDPDTGK   71 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEEESS--------SEEEEEEECTTSEEEEEE-TT-CEEEEETTTTE
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCCeE-EEEecC--------CCceEEEEccCCEEEEEE-cC-ceEEEecCCCc
Confidence            46788875666777766789999999986643 334433        26777777 666555554 33 44555998886


Q ss_pred             EEEEeec-----ccccEEEEEECCCCcEEEeee
Q psy17133         87 LVHSMVA-----HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        87 ~~~~~~~-----~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .......     .......+++.|+|++.++..
T Consensus        72 ~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~  104 (246)
T PF08450_consen   72 VTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDS  104 (246)
T ss_dssp             EEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEE
T ss_pred             EEEEeeccCCCcccCCCceEEEcCCCCEEEEec
Confidence            6554432     234678999999999777643

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=97.51  E-value=0.0011  Score=27.94  Aligned_cols=32  Identities=13%  Similarity=0.161  Sum_probs=26.6

Q ss_pred             CCceEEEEccCCC--cEEEEeeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDES--TKMVTAFDNSACVLFDLET   36 (116)
Q Consensus         5 ~~v~~~~~~~~~~--~~l~~~~~~~~v~i~~~~~   36 (116)
                      |.+.++.|+|..+  ++|+.+-..+.+.++|+.+
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            5789999998555  6888877889999999984

It contains a characteristic DLL sequence motif.

>KOG3617|consensus

Probab=97.50  E-value=0.00018  Score=48.61  Aligned_cols=70  Identities=9%  Similarity=0.090  Sum_probs=56.8

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +++++|+| ..-.|+.+-..+.+.+|...+.+.-.....|      +..+..+.|+|+|..+.++..-|.+.+|...
T Consensus        62 atSLCWHp-e~~vLa~gwe~g~~~v~~~~~~e~htv~~th------~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   62 ATSLCWHP-EEFVLAQGWEMGVSDVQKTNTTETHTVVETH------PAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             hhhhccCh-HHHHHhhccccceeEEEecCCceeeeeccCC------CCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            46788999 6567777878899999998765543333455      6789999999999999999999999999876

>KOG4499|consensus

Probab=97.47  E-value=0.0065  Score=35.57  Aligned_cols=102  Identities=13%  Similarity=0.088  Sum_probs=68.9

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEE--CCCCc-----eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFD--LETGK-----PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~--~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      ..++|+.+...+.+.-+.+-.|.-||  ..+|.     .+..++..+.  ...-....+++..+|.+.++.-+.++|...
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~--~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~  238 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQP--FESLEPDGMTIDTEGNLYVATFNGGTVQKV  238 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCC--cCCCCCCcceEccCCcEEEEEecCcEEEEE
Confidence            56788864445556667788887777  55553     2333332211  001224456777788888888888999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEEC-CCCcEEE
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVD-PQGLYIL  111 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~  111 (116)
                      |..+|+.+..+.-....+++++|- ++-..|+
T Consensus       239 dp~tGK~L~eiklPt~qitsccFgGkn~d~~y  270 (310)
T KOG4499|consen  239 DPTTGKILLEIKLPTPQITSCCFGGKNLDILY  270 (310)
T ss_pred             CCCCCcEEEEEEcCCCceEEEEecCCCccEEE
Confidence            999999999988778899999995 3444444

>KOG1920|consensus

Probab=97.39  E-value=0.0025  Score=44.62  Aligned_cols=96  Identities=19%  Similarity=0.233  Sum_probs=63.6

Q ss_pred             eEEEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---CCCeEEE
Q psy17133          8 TSIDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---DDRHIRF   79 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~d~~i~~   79 (116)
                      ..+.|.. +|+++++..     ..+.+++||.+ |..-..-...      .+.-.+++|-|.|.++++..   .+..|.+
T Consensus       199 ~~IsWRg-Dg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~------~~l~~~LsWkPsgs~iA~iq~~~sd~~Ivf  270 (1265)
T KOG1920|consen  199 TSISWRG-DGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPV------EGLQHSLSWKPSGSLIAAIQCKTSDSDIVF  270 (1265)
T ss_pred             ceEEEcc-CCcEEEEEEEeccCCceeEEEeccc-chhhcccCcc------cccccceeecCCCCeEeeeeecCCCCcEEE
Confidence            4588987 888888743     23789999987 4432222222      23456899999999998854   3557888


Q ss_pred             EECCCCeEEEE----eecccccEEEEEECCCCcEEEe
Q psy17133         80 FDNVSGKLVHS----MVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        80 ~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +. ++|..-..    +......+..++|+.++..|++
T Consensus       271 fE-rNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv  306 (1265)
T KOG1920|consen  271 FE-RNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAV  306 (1265)
T ss_pred             Ee-cCCccccccccCCcccccchheeeecCCCCceee
Confidence            87 33432222    2223344899999999998876

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.37  E-value=0.00064  Score=41.05  Aligned_cols=108  Identities=19%  Similarity=0.264  Sum_probs=69.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      |.-.+.+++|.. +...++++ ++-+|-+|.++-..   .+..++++... .-...|++..|+|. ...+...+..|.|+
T Consensus       171 H~yhiNSiS~Ns-D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nme-eLteVItSaeFhp~~cn~fmYSsSkG~Ik  247 (460)
T COG5170         171 HPYHINSISFNS-DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNME-ELTEVITSAEFHPEMCNVFMYSSSKGEIK  247 (460)
T ss_pred             ceeEeeeeeecC-chheeeec-cceeeeeccccccCCceEEEeccCccHH-HHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence            344567888887 55666654 47789999987322   34444554220 00135788999997 45666777899999


Q ss_pred             EEECCCCeE------EEE--e--------ecccccEEEEEECCCCcEEEee
Q psy17133         79 FFDNVSGKL------VHS--M--------VAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~------~~~--~--------~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +-|++...+      +..  +        ..-...|..+.|+++|+++++-
T Consensus       248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR  298 (460)
T COG5170         248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR  298 (460)
T ss_pred             ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe
Confidence            999874321      111  1        1123468899999999998764

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.34  E-value=0.014  Score=36.57  Aligned_cols=94  Identities=18%  Similarity=0.082  Sum_probs=50.7

Q ss_pred             EEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133         11 DFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        11 ~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      +|.+ +|++|+.++.   ...+++.|+.+++....-.+.      ........++|+.+.++.......|+-.|+++.+.
T Consensus        42 ~ft~-dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~------g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~  114 (386)
T PF14583_consen   42 CFTD-DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGP------GDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEE  114 (386)
T ss_dssp             -B-T-TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-------B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--E
T ss_pred             CcCC-CCCEEEEEeccCCCcceEEEEcccCEEEECccCC------CCCccceEEecCCCeEEEEECCCeEEEEECCcCcE
Confidence            5667 5666655553   556888899888765544443      12233566788888776665667899999999887


Q ss_pred             EEEeecccccEEEEEE--CCCCcEEE
Q psy17133         88 VHSMVAHLDAVTSLAV--DPQGLYIL  111 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~--~~~~~~l~  111 (116)
                      ...+......+-...|  +.++..++
T Consensus       115 ~~vy~~p~~~~g~gt~v~n~d~t~~~  140 (386)
T PF14583_consen  115 RVVYEVPDDWKGYGTWVANSDCTKLV  140 (386)
T ss_dssp             EEEEE--TTEEEEEEEEE-TTSSEEE
T ss_pred             EEEEECCcccccccceeeCCCccEEE
Confidence            6666655554444445  45666654

>KOG2444|consensus

Probab=97.34  E-value=0.0047  Score=35.72  Aligned_cols=94  Identities=14%  Similarity=0.049  Sum_probs=56.5

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL   95 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~   95 (116)
                      ....+++|..++.+++|...-............    ......+..-.++.+.++++.++.++.|+++..+.+.....|.
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~----e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~  144 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGE----ESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHN  144 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhccc----ccceeccccccccceeEEeccCCceeeeccccCceeeeecccc
Confidence            446788888999999998762211111111100    1112222222345688999999999999999888877766665


Q ss_pred             -ccEEEEEECCCCcEEEee
Q psy17133         96 -DAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        96 -~~v~~~~~~~~~~~l~~~  113 (116)
                       ..+.....+..++.++.+
T Consensus       145 ~~~~e~~ivv~sd~~i~~a  163 (238)
T KOG2444|consen  145 FESGEELIVVGSDEFLKIA  163 (238)
T ss_pred             CCCcceeEEecCCceEEee
Confidence             344444445555555544

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=97.33  E-value=0.012  Score=37.26  Aligned_cols=81  Identities=14%  Similarity=0.040  Sum_probs=56.7

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-----------------CC-E
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-----------------LP-L   67 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----------------~~-~   67 (116)
                      .+..+..+| ++.+.++...-|+|.++|+..+..++-+++.++.     .+.-+.....                 .. +
T Consensus       309 ~~~~i~~sP-~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA-----qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~L  382 (415)
T PF14655_consen  309 EGESICLSP-SGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA-----QCGWIEVPEEGDRDRSNSNSPKSSSRFALFL  382 (415)
T ss_pred             eEEEEEECC-CCCEEEEEcCCCcEEEEECCCChhhhhhccCccc-----eEEEEEeecccccccccccccCCCCcceEEE
Confidence            467889999 6788888878899999999999888888887542     1211111110                 01 2


Q ss_pred             EEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         68 TITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        68 ~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ++-+-..|.|.+|.+++|..+..+.
T Consensus       383 vIyaprRg~lEvW~~~~g~Rv~a~~  407 (415)
T PF14655_consen  383 VIYAPRRGILEVWSMRQGPRVAAFN  407 (415)
T ss_pred             EEEeccCCeEEEEecCCCCEEEEEE
Confidence            3445668899999999888776664

>KOG1275|consensus

Probab=97.32  E-value=0.01  Score=40.89  Aligned_cols=89  Identities=17%  Similarity=0.213  Sum_probs=66.5

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      +..++.|+--..+..+|+.+.+........      .+.+.-+  ..+++.+++|...|+|.+-|..+-+.++++..|.+
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~------a~~v~im--R~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~  218 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVS------ASGVTIM--RYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSG  218 (1118)
T ss_pred             Ccceeecchhhheeeeecccceeeeeeecc------CCceEEE--EecCcEEEeecccceEEeecCCcCceeeeeecccc
Confidence            345555655556777788877665555444      2344444  34678999999999999999999999999999999


Q ss_pred             cEEEEEECCCCcEEEeeec
Q psy17133         97 AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s~  115 (116)
                      .+.++  +-.|+.|++++.
T Consensus       219 siSDf--Dv~GNlLitCG~  235 (1118)
T KOG1275|consen  219 SISDF--DVQGNLLITCGY  235 (1118)
T ss_pred             ceeee--eccCCeEEEeec
Confidence            88755  668889998874

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.32  E-value=0.0022  Score=43.52  Aligned_cols=60  Identities=10%  Similarity=0.101  Sum_probs=44.8

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ...+|++|+.+|.|++||-...+....+++-      ..+|..++.+.||+++++.+ +..|.+++.
T Consensus       587 ~~G~iavgs~~G~IRLyd~~g~~AKT~lp~l------G~pI~~iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  587 EDGYIAVGSNKGDIRLYDRLGKRAKTALPGL------GDPIIGIDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             CCceEEEEeCCCcEEeecccchhhhhcCCCC------CCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence            4468899999999999996543333344544      46899999999999887776 556667664

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG0882|consensus

Probab=97.30  E-value=0.0013  Score=41.44  Aligned_cols=87  Identities=15%  Similarity=0.066  Sum_probs=62.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC------CceeEEEecCCc---CcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET------GKPVVRIDSSQF---GVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~------~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      +|..+|..+.+.| -++.+++....|-|..|....      .+....++....   ..-..+...++.++|++..+.+.+
T Consensus       142 lH~sPV~~i~y~q-a~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~  220 (558)
T KOG0882|consen  142 LHFSPVKKIRYNQ-AGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLN  220 (558)
T ss_pred             cccCceEEEEeec-cccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccC
Confidence            4778899999999 788888888889999998762      111111111100   001134678999999999999999


Q ss_pred             CCCeEEEEECCCCeEEE
Q psy17133         73 DDRHIRFFDNVSGKLVH   89 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~   89 (116)
                      .|..|+++..+++++++
T Consensus       221 ~DrkVR~F~~KtGklvq  237 (558)
T KOG0882|consen  221 PDRKVRGFVFKTGKLVQ  237 (558)
T ss_pred             cccEEEEEEeccchhhh
Confidence            99999999999875443

>KOG2395|consensus

Probab=97.30  E-value=0.0037  Score=40.38  Aligned_cols=90  Identities=16%  Similarity=0.262  Sum_probs=56.3

Q ss_pred             EeeCCCeEEEEECCCC-c-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE-EEeecccccE
Q psy17133         22 TAFDNSACVLFDLETG-K-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV-HSMVAHLDAV   98 (116)
Q Consensus        22 ~~~~~~~v~i~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~~~~~v   98 (116)
                      .|-.+..|.-||.+-. . .+...+.+...  ......|++-..+| +++.++.+|.|++||- .++.. ..+.+-..+|
T Consensus       399 vGLs~n~vfriDpRv~~~~kl~~~q~kqy~--~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I  474 (644)
T KOG2395|consen  399 VGLSDNSVFRIDPRVQGKNKLAVVQSKQYS--TKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAI  474 (644)
T ss_pred             EeecCCceEEecccccCcceeeeeeccccc--cccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCce
Confidence            3445778888998732 2 33333333220  01223344333333 7889999999999996 44433 3455667789


Q ss_pred             EEEEECCCCcEEEeeec
Q psy17133         99 TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        99 ~~~~~~~~~~~l~~~s~  115 (116)
                      ..+..+.+|++++..+.
T Consensus       475 ~hVdvtadGKwil~Tc~  491 (644)
T KOG2395|consen  475 KHVDVTADGKWILATCK  491 (644)
T ss_pred             eeEEeeccCcEEEEecc
Confidence            99999999999876653

>KOG4190|consensus

Probab=97.29  E-value=0.0015  Score=42.49  Aligned_cols=104  Identities=13%  Similarity=0.232  Sum_probs=67.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEE-EEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTI-TAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~-~~~~d~~i~~   79 (116)
                      |..+|.++.|.. +...+++  -|+.+++||.--++.+..+.....    .+...-+..-+  +..++. .++...++++
T Consensus       783 Hkk~i~~igfL~-~lr~i~S--cD~giHlWDPFigr~Laq~~dapk----~~a~~~ikcl~nv~~~iliAgcsaeSTVKl  855 (1034)
T KOG4190|consen  783 HKKPIHDIGFLA-DLRSIAS--CDGGIHLWDPFIGRLLAQMEDAPK----EGAGGNIKCLENVDRHILIAGCSAESTVKL  855 (1034)
T ss_pred             ccCcccceeeee-ccceeee--ccCcceeecccccchhHhhhcCcc----cCCCceeEecccCcchheeeeccchhhhee
Confidence            667788888876 4455554  478899999987776664432210    12222232223  334444 4467889999


Q ss_pred             EECCCCeEEEEee-----cccccEEEEEECCCCcEEEee
Q psy17133         80 FDNVSGKLVHSMV-----AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        80 ~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +|.+.++....++     +..+.+++++..+.|++++.+
T Consensus       856 ~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~  894 (1034)
T KOG4190|consen  856 FDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAA  894 (1034)
T ss_pred             eecccccceeeEEeccCCCCchheeEEEeccCcchhhHH
Confidence            9998887666554     234568899999999987643

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=97.28  E-value=0.0056  Score=37.20  Aligned_cols=79  Identities=15%  Similarity=0.179  Sum_probs=52.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCc------CCCCceeEEEEcCC-CC-EEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGV------SGGGGINRVVCHPT-LP-LTITA   71 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~------~~~~~i~~~~~~~~-~~-~~~~~   71 (116)
                      ..|+++.|.. .|.++++|...|+|.+|.-+...     ...+|+.|....      .-...|..+.|..+ ++ .+...
T Consensus        27 d~ItaVefd~-tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          27 DKITAVEFDE-TGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             ceeeEEEecc-ccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            4688999987 78999999999999998765321     122344442210      11235677887754 43 56667


Q ss_pred             eCCCeEEEEECCC
Q psy17133         72 HDDRHIRFFDNVS   84 (116)
Q Consensus        72 ~~d~~i~~~~~~~   84 (116)
                      +.|.+|++|.+..
T Consensus       106 tNdktiKlWKiye  118 (460)
T COG5170         106 TNDKTIKLWKIYE  118 (460)
T ss_pred             cCCceeeeeeeec
Confidence            7899999998754

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.24  E-value=0.014  Score=34.48  Aligned_cols=107  Identities=15%  Similarity=0.186  Sum_probs=55.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC---CceeEE--EecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET---GKPVVR--IDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i   77 (116)
                      +..+..++|+| ..+.++.+-+..-..+|.+..   ...+..  .............+.++.++|. +.+++....+..|
T Consensus       117 N~G~EGla~D~-~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l  195 (248)
T PF06977_consen  117 NKGFEGLAYDP-KTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLL  195 (248)
T ss_dssp             SS--EEEEEET-TTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEE
T ss_pred             CcceEEEEEcC-CCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeE
Confidence            44578899999 556666665554455555432   111111  1111000011345788999987 5566777778899


Q ss_pred             EEEECCCCeEEEEeeccc---------ccEEEEEECCCCcEEEe
Q psy17133         78 RFFDNVSGKLVHSMVAHL---------DAVTSLAVDPQGLYILS  112 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~  112 (116)
                      ..+| .+|+.+..+.-..         ...-.++|.++|+..++
T Consensus       196 ~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv  238 (248)
T PF06977_consen  196 LELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV  238 (248)
T ss_dssp             EEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE
T ss_pred             EEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE
Confidence            9999 5587766654222         25789999999987665

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG2079|consensus

Probab=97.24  E-value=0.0055  Score=42.64  Aligned_cols=69  Identities=14%  Similarity=0.204  Sum_probs=51.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .++|++++|+. +|..++.|..+|.|.+||...++....+.-+..  . ...+..+.+..++..+.++...|.
T Consensus       130 ~~~Vtsvafn~-dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a--p-~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  130 QGPVTSVAFNQ-DGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA--P-VTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             CCcceeeEecC-CCceeccccCCCcEEEEEccCCcceeeeeecCC--c-cceEEEEEEeCCCcEEEEccCCCc
Confidence            47899999998 889999999999999999998888777764421  0 123445555566667777766665

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.19  E-value=0.0085  Score=38.35  Aligned_cols=80  Identities=18%  Similarity=0.144  Sum_probs=45.4

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG-----------   85 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-----------   85 (116)
                      |..|+..+ ++.|.+||+++++.+.++...        .+..+.|++++.+++..+.+ .+.+.+....           
T Consensus       117 G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~--------~vk~V~Ws~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e  186 (443)
T PF04053_consen  117 GNLLGVKS-SDFICFYDWETGKLIRRIDVS--------AVKYVIWSDDGELVALVTKD-SIYILKYNLEAVAAIPEEGVE  186 (443)
T ss_dssp             SSSEEEEE-TTEEEEE-TTT--EEEEESS---------E-EEEEE-TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-G
T ss_pred             CcEEEEEC-CCCEEEEEhhHcceeeEEecC--------CCcEEEEECCCCEEEEEeCC-eEEEEEecchhcccccccCch
Confidence            45666555 448999999999999998765        48999999999999888755 5555543311           


Q ss_pred             eEEEEeecccccEEEEEECCC
Q psy17133         86 KLVHSMVAHLDAVTSLAVDPQ  106 (116)
Q Consensus        86 ~~~~~~~~~~~~v~~~~~~~~  106 (116)
                      .....+......|.+.+|..+
T Consensus       187 ~~f~~~~E~~~~IkSg~W~~d  207 (443)
T PF04053_consen  187 DAFELIHEISERIKSGCWVED  207 (443)
T ss_dssp             GGEEEEEEE-S--SEEEEETT
T ss_pred             hceEEEEEecceeEEEEEEcC
Confidence            022222222446777777666

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG4640|consensus

Probab=97.17  E-value=0.004  Score=40.85  Aligned_cols=62  Identities=19%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEE-EEEECCCCcEEEeeecC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVT-SLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~s~d  116 (116)
                      ..+..+.|+|.-.++|.+..+|.+.++.+. -+.+.++.-+...++ +++|.|||+.|+.|=.|
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kd   83 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKD   83 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecC
Confidence            457889999999999999999999999887 556666664444555 99999999999987543

>KOG1832|consensus

Probab=97.17  E-value=0.0018  Score=44.37  Aligned_cols=62  Identities=18%  Similarity=0.175  Sum_probs=56.2

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ....++++|+-+.+.++.|+-.|.|++++..+|.......+|...++.+.-+.+|..+++.+
T Consensus      1101 ~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltss 1162 (1516)
T KOG1832|consen 1101 TALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSS 1162 (1516)
T ss_pred             ccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeec
Confidence            56789999999999999999999999999999999999999999999999999998877644

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=97.17  E-value=0.018  Score=34.35  Aligned_cols=76  Identities=9%  Similarity=0.143  Sum_probs=49.5

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      ++.+. +|+.|+. -.|..|.|-..++.  ..+.+.....+.   ...-..++|+||+.+++.+...|+|+++|+.. ..
T Consensus         3 ~~~~~-~Gk~lAi-~qd~~iEiRsa~Ddf~si~~kcqVpkD~---~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~   76 (282)
T PF15492_consen    3 LALSS-DGKLLAI-LQDQCIEIRSAKDDFSSIIGKCQVPKDP---NPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SE   76 (282)
T ss_pred             eeecC-CCcEEEE-EeccEEEEEeccCCchheeEEEecCCCC---CchheEEEECCCCcEEEEEcCCCeEEEEeccc-ce
Confidence            34455 6666665 44667777766543  233444333210   23467899999999999999999999999874 44


Q ss_pred             EEEe
Q psy17133         88 VHSM   91 (116)
Q Consensus        88 ~~~~   91 (116)
                      +..+
T Consensus        77 lf~I   80 (282)
T PF15492_consen   77 LFVI   80 (282)
T ss_pred             eEEc
Confidence            4443

>KOG1920|consensus

Probab=97.12  E-value=0.051  Score=38.67  Aligned_cols=69  Identities=17%  Similarity=0.227  Sum_probs=52.1

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      +.|.++.|.. +.+.++.+...|.+.+-|.++...  ++.+..     .+.|.+++|+||+.+++......++.+-+
T Consensus        69 ~~i~s~~fl~-d~~~i~v~~~~G~iilvd~et~~~--eivg~v-----d~GI~aaswS~Dee~l~liT~~~tll~mT  137 (1265)
T KOG1920|consen   69 DEIVSVQFLA-DTNSICVITALGDIILVDPETLEL--EIVGNV-----DNGISAASWSPDEELLALITGRQTLLFMT  137 (1265)
T ss_pred             cceEEEEEec-ccceEEEEecCCcEEEEcccccce--eeeeec-----cCceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence            5788889988 678888888889999888776532  222222     35799999999999999888877776653

>KOG1275|consensus

Probab=97.10  E-value=0.02  Score=39.57  Aligned_cols=61  Identities=16%  Similarity=0.187  Sum_probs=48.6

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEEEEECCC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIRFFDNVS   84 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~~~~~~~   84 (116)
                      ++..+.+|...|.|.+-|..+.+.++++..|      ++.+..++.  .|.++++++.         |..|++||++.
T Consensus       186 Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aH------s~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRm  255 (1118)
T KOG1275|consen  186 NNRNLFCGDTRGTVFLRDPNSFETIHTFDAH------SGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRM  255 (1118)
T ss_pred             cCcEEEeecccceEEeecCCcCceeeeeecc------ccceeeeec--cCCeEEEeecccccccccccchhhhhhhhh
Confidence            5578888999999999999999999999999      566666544  5777777664         45688888764

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.03  E-value=0.012  Score=36.16  Aligned_cols=59  Identities=27%  Similarity=0.378  Sum_probs=43.6

Q ss_pred             eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEE-eCCCeEEEEECCCCeEEEEeec
Q psy17133         28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITA-HDDRHIRFFDNVSGKLVHSMVA   93 (116)
Q Consensus        28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~-~~d~~i~~~~~~~~~~~~~~~~   93 (116)
                      .|-++|+.+++.+.+++..       ..+.++.++.+.+ +|++. ..++.+.+||..+|+.++.+..
T Consensus       270 eVWv~D~~t~krv~Ri~l~-------~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  270 EVWVYDLKTHKRVARIPLE-------HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             EEEEEETTTTEEEEEEEEE-------EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             EEEEEECCCCeEEEEEeCC-------CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            4667788899989888764       3578999998754 66554 4579999999999999988763

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=97.02  E-value=0.023  Score=32.87  Aligned_cols=68  Identities=19%  Similarity=0.185  Sum_probs=48.3

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      ++..+++++.++.++.||..+|+.+..+.....    ....  .  ...+..++.+..++.+..+|.++|+.+...
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~----~~~~--~--~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~  102 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP----ISGA--P--VVDGGRVYVGTSDGSLYALDAKTGKVLWSI  102 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEECSSC----GGSG--E--EEETTEEEEEETTSEEEEEETTTSCEEEEE
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeecccc----ccce--e--eecccccccccceeeeEecccCCcceeeee
Confidence            346677778899999999999998887775421    1111  1  223455666667889999999999998874

...

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.98  E-value=0.038  Score=34.78  Aligned_cols=100  Identities=18%  Similarity=0.228  Sum_probs=70.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i~~~~~~   83 (116)
                      ...+..++...+..+....+..+.+.|..+.+........       .....++++|+++.++.+..   ++.+.+.|..
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG-------~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~  148 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVG-------LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA  148 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeec-------cCCceEEECCCCCEEEEEecccCCceEEEEeCC
Confidence            3456777733335555556788999997776666665443       25678999999876666544   6899999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+..........+ ..++++|+|+.++.+.
T Consensus       149 t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~  178 (381)
T COG3391         149 TNKVTATIPVGNTP-TGVAVDPDGNKVYVTN  178 (381)
T ss_pred             CCeEEEEEecCCCc-ceEEECCCCCeEEEEe
Confidence            88888775433333 8899999999776543

>KOG4649|consensus

Probab=96.96  E-value=0.031  Score=33.40  Aligned_cols=97  Identities=13%  Similarity=0.097  Sum_probs=63.8

Q ss_pred             EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      ..++.+.+++.++-.+.+.--|..+|+...+-...       ..+.+-+.- -|.+++.++..+.+++-+.++|+....+
T Consensus        18 V~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg-------~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f   89 (354)
T KOG4649|consen   18 VCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILG-------VRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF   89 (354)
T ss_pred             EecCCceEEEEecCCceEEEecCCCCcEEeehhhC-------ceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee
Confidence            34534466777788888888899888765443222       123332222 3677999999999999999999877766


Q ss_pred             ecccccEEEEEECCCCcEEEeeecC
Q psy17133         92 VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        92 ~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .....--......+++..+..+++|
T Consensus        90 ~~~~~vk~~a~~d~~~glIycgshd  114 (354)
T KOG4649|consen   90 VILETVKVRAQCDFDGGLIYCGSHD  114 (354)
T ss_pred             eehhhhccceEEcCCCceEEEecCC
Confidence            5332211234457788888777765

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=96.93  E-value=0.041  Score=34.35  Aligned_cols=67  Identities=22%  Similarity=0.209  Sum_probs=47.6

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ..+++++.++.++.+|..+|+.+-......      .......  .++..++.++.++.+..+|..+|+.+....
T Consensus        66 ~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~------~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~  132 (377)
T TIGR03300        66 GKVYAADADGTVVALDAETGKRLWRVDLDE------RLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAK  132 (377)
T ss_pred             CEEEEECCCCeEEEEEccCCcEeeeecCCC------CcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeec
Confidence            567777888999999999998877665441      1111222  246677788889999999998888776543

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.93  E-value=0.017  Score=29.79  Aligned_cols=66  Identities=12%  Similarity=0.148  Sum_probs=47.4

Q ss_pred             ceEEEE---ccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          7 PTSIDF---VRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         7 v~~~~~---~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.++++   ..++.+.|++|++|..|++|+-.  ..+.++...       ..+..+.-... ..++.+-.+|+|-+|+-
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-------~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-------DKVTSLCSLGG-GRFAYALANGTVGVYDR   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-------cceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence            444444   44344789999999999999854  456666654       46777776655 55778888999999975

>KOG2114|consensus

Probab=96.88  E-value=0.075  Score=36.59  Aligned_cols=103  Identities=5%  Similarity=0.044  Sum_probs=67.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      ..++..++.+. +-+.++.|..+|.|..+.-.   +......+. +..    ..+|+.+.+..+++.++.......|.+|
T Consensus       125 ~~p~s~l~Vs~-~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~-~~~----~~pITgL~~~~d~~s~lFv~Tt~~V~~y  198 (933)
T KOG2114|consen  125 PSPASSLAVSE-DLKTIVCGFTNGLVICYKGDILRDRGSRQDYS-HRG----KEPITGLALRSDGKSVLFVATTEQVMLY  198 (933)
T ss_pred             CCcceEEEEEc-cccEEEEEecCcEEEEEcCcchhccccceeee-ccC----CCCceeeEEecCCceeEEEEecceeEEE
Confidence            45677788887 67889999999999988532   111112221 211    4689999999888764444456678999


Q ss_pred             ECCCCe-EEEEeecccccEEEEEECCCCcEEEe
Q psy17133         81 DNVSGK-LVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        81 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+.... ....+..+...+.+..|++....++.
T Consensus       199 ~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIc  231 (933)
T KOG2114|consen  199 SLSGRTPSLKVLDNNGISLNCSSFSDGTYQFIC  231 (933)
T ss_pred             EecCCCcceeeeccCCccceeeecCCCCccEEE
Confidence            887433 24445566667788888775553333

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.82  E-value=0.074  Score=35.71  Aligned_cols=93  Identities=12%  Similarity=0.160  Sum_probs=60.5

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc--CCCCEEEEEeCCCeEEEEECC-----C-C---
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH--PTLPLTITAHDDRHIRFFDNV-----S-G---   85 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~d~~i~~~~~~-----~-~---   85 (116)
                      ++..++.+....+.|||...+....+-.-..     ...|..++|.  |++..+.+.+-.+.|.++.-.     . +   
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~-----~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w  115 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYEESFSE-----DDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSW  115 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEeeeecC-----CCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCccc
Confidence            3455555567789999998765333222111     3678999887  678888888888898888531     1 1   


Q ss_pred             eEEEEe--eccc-ccEEEEEECCCCcEEEeee
Q psy17133         86 KLVHSM--VAHL-DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        86 ~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..++.+  ..+. .+|.+..|.++|..++.++
T Consensus       116 ~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG  147 (631)
T PF12234_consen  116 APIRKIDISSHTPHPIGDSIWLKDGTLVVGSG  147 (631)
T ss_pred             ceeEEEEeecCCCCCccceeEecCCeEEEEeC
Confidence            122222  2233 5788999999998877554

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.55  E-value=0.09  Score=33.14  Aligned_cols=99  Identities=20%  Similarity=0.262  Sum_probs=67.2

Q ss_pred             CceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD   81 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~   81 (116)
                      ....+.++| +++.+.++..   +..+.+.|..+++........      .. ...++++|++..++... .++.+.+.|
T Consensus       117 ~P~~~~~~~-~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG------~~-P~~~a~~p~g~~vyv~~~~~~~v~vi~  188 (381)
T COG3391         117 GPVGLAVDP-DGKYVYVANAGNGNNTVSVIDAATNKVTATIPVG------NT-PTGVAVDPDGNKVYVTNSDDNTVSVID  188 (381)
T ss_pred             CCceEEECC-CCCEEEEEecccCCceEEEEeCCCCeEEEEEecC------CC-cceEEECCCCCeEEEEecCCCeEEEEe
Confidence            456788999 5555554443   688999999888877775443      22 38899999998665554 689999999


Q ss_pred             CCCCeEEE-E---eecccccEEEEEECCCCcEEEe
Q psy17133         82 NVSGKLVH-S---MVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        82 ~~~~~~~~-~---~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .......+ .   ..........+.++|++..+..
T Consensus       189 ~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV  223 (381)
T COG3391         189 TSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYV  223 (381)
T ss_pred             CCCcceeccccccccccCCCCceEEECCCCCEEEE
Confidence            77665553 1   0112223466788999986654

>KOG2377|consensus

Probab=96.51  E-value=0.075  Score=34.36  Aligned_cols=103  Identities=13%  Similarity=0.119  Sum_probs=61.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      -..|+|.++.|++ +.+.+++--.+..|.+.+....+...  ..++...    +..|.+.+|..+.. ++.....| +-+
T Consensus        64 ~d~G~I~SIkFSl-DnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k----~~~IlGF~W~~s~e-~A~i~~~G-~e~  136 (657)
T KOG2377|consen   64 DDKGEIKSIKFSL-DNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTK----NANILGFCWTSSTE-IAFITDQG-IEF  136 (657)
T ss_pred             cCCCceeEEEecc-CcceEEEEecCceEEEEecCCCchhhHHHHHhccC----cceeEEEEEecCee-EEEEecCC-eEE
Confidence            3468999999999 77888888889999999874322211  1122211    34588899987643 33333222 233


Q ss_pred             EECC-CCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         80 FDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        80 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      |... ..+.++..+.+...|.-..|.++.+.+.
T Consensus       137 y~v~pekrslRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  137 YQVLPEKRSLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             EEEchhhhhhhhhhhcccCccEEEEccccceEe
Confidence            3322 2333444445556677777777766543

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=96.48  E-value=0.088  Score=32.19  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=54.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-CC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD-NV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~-~~   83 (116)
                      +.+..+.-++ ++.+++++....-+.-|+.-...-...-...      +..+..+.|.|++.+...+ ..+.++.=+ ..
T Consensus       145 gs~~~~~r~~-dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~------~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~  216 (302)
T PF14870_consen  145 GSINDITRSS-DGRYVAVSSRGNFYSSWDPGQTTWQPHNRNS------SRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPD  216 (302)
T ss_dssp             --EEEEEE-T-TS-EEEEETTSSEEEEE-TT-SS-EEEE--S------SS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TT
T ss_pred             ceeEeEEECC-CCcEEEEECcccEEEEecCCCccceEEccCc------cceehhceecCCCCEEEEe-CCcEEEEccCCC
Confidence            4566777777 7788877765555556775322111121222      4579999999998876654 778888777 22


Q ss_pred             CCeEEEE-ee---cccccEEEEEECCCCcEEEeeec
Q psy17133         84 SGKLVHS-MV---AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        84 ~~~~~~~-~~---~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+.... +.   ...-.+..++|.++....++|+.
T Consensus       217 ~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~  252 (302)
T PF14870_consen  217 DGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS  252 (302)
T ss_dssp             EEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST
T ss_pred             CccccccccCCcccCceeeEEEEecCCCCEEEEeCC
Confidence            2222221 11   12234789999998888777653

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.47  E-value=0.039  Score=34.90  Aligned_cols=58  Identities=16%  Similarity=0.193  Sum_probs=39.2

Q ss_pred             eeEEEEcCCCCEEEEE-eCC----CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         56 INRVVCHPTLPLTITA-HDD----RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        56 i~~~~~~~~~~~~~~~-~~d----~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +....++|++++++.+ +..    ..++++|+++|+.+....... ....+.|.++++.|+-..
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~  188 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTR  188 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEE
Confidence            3467889999977654 322    459999999998765432111 123399999988876544

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG2395|consensus

Probab=96.44  E-value=0.024  Score=36.93  Aligned_cols=60  Identities=15%  Similarity=0.137  Sum_probs=44.9

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +..++++|+.+|.|++||-...+....+++-      ...|..+..+.+|++++..+ +.++.+.++
T Consensus       440 ~sG~IvvgS~~GdIRLYdri~~~AKTAlPgL------G~~I~hVdvtadGKwil~Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  440 ESGYIVVGSLKGDIRLYDRIGRRAKTALPGL------GDAIKHVDVTADGKWILATC-KTYLLLIDT  499 (644)
T ss_pred             CCceEEEeecCCcEEeehhhhhhhhhccccc------CCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence            4568899999999999998433444455655      46799999999999887765 456666654

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=96.36  E-value=0.11  Score=32.12  Aligned_cols=105  Identities=19%  Similarity=0.269  Sum_probs=55.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce---eEEEecCCcCcCCCCceeEEEEcCC---CCEEE-EEeC----
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP---VVRIDSSQFGVSGGGGINRVVCHPT---LPLTI-TAHD----   73 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~-~~~~----   73 (116)
                      ..++.++|.| ++.+++ +...+.|++++ .++..   +..+.  ............++++|+   ...++ ....    
T Consensus         2 ~~P~~~a~~p-dG~l~v-~e~~G~i~~~~-~~g~~~~~v~~~~--~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~   76 (331)
T PF07995_consen    2 NNPRSMAFLP-DGRLLV-AERSGRIWVVD-KDGSLKTPVADLP--EVFADGERGLLGIAFHPDFASNGYLYVYYTNADED   76 (331)
T ss_dssp             SSEEEEEEET-TSCEEE-EETTTEEEEEE-TTTEECEEEEE-T--TTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TS
T ss_pred             CCceEEEEeC-CCcEEE-EeCCceEEEEe-CCCcCcceecccc--cccccccCCcccceeccccCCCCEEEEEEEcccCC
Confidence            3578999999 666655 46699999999 44443   22221  111112456899999994   23333 3221    


Q ss_pred             --C--CeEEEEECCCC-------eEE-EEeec---ccccEEEEEECCCCcEEEeee
Q psy17133         74 --D--RHIRFFDNVSG-------KLV-HSMVA---HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 --d--~~i~~~~~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~s  114 (116)
                        .  ..|.-|....+       +.+ ..+..   ..+....+.|.|||.+.++.+
T Consensus        77 ~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G  132 (331)
T PF07995_consen   77 GGDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVG  132 (331)
T ss_dssp             SSSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB
T ss_pred             CCCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeC
Confidence              1  23444444333       111 11122   234567799999997766654

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.33  E-value=0.11  Score=31.84  Aligned_cols=60  Identities=17%  Similarity=0.161  Sum_probs=39.6

Q ss_pred             CceeEEEEcCCCCEEEEEeC---------CCeEEEEECC-CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         54 GGINRVVCHPTLPLTITAHD---------DRHIRFFDNV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~---------d~~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ...+.....|+|.+.++...         ...-.+|.+. .+..++....+-...+.++||||++.|+.+
T Consensus       111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~a  180 (307)
T COG3386         111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVA  180 (307)
T ss_pred             CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence            45678899999997776443         1122444444 466666665545566889999999877643

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.32  E-value=0.17  Score=33.74  Aligned_cols=107  Identities=7%  Similarity=-0.007  Sum_probs=63.1

Q ss_pred             CCCceEEEEccCC----CcEEEEeeCCCeEEEEECC-----CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          4 NGTPTSIDFVRDE----STKMVTAFDNSACVLFDLE-----TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         4 ~~~v~~~~~~~~~----~~~l~~~~~~~~v~i~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      -..|.++.|.|-.    ..+|++- -...|.+|.+.     .++.+..-.++... ...--.....|+|....++.....
T Consensus        56 FEhV~GlsW~P~~~~~~paLLAVQ-HkkhVtVWqL~~s~~e~~K~l~sQtcEi~e-~~pvLpQGCVWHPk~~iL~VLT~~  133 (671)
T PF15390_consen   56 FEHVHGLSWAPPCTADTPALLAVQ-HKKHVTVWQLCPSTTERNKLLMSQTCEIRE-PFPVLPQGCVWHPKKAILTVLTAR  133 (671)
T ss_pred             cceeeeeeecCcccCCCCceEEEe-ccceEEEEEeccCccccccceeeeeeeccC-CcccCCCcccccCCCceEEEEecC
Confidence            3567889998841    2344444 36689999876     22222222222100 001112456799999888877665


Q ss_pred             CeEEEEECC--CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         75 RHIRFFDNV--SGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        75 ~~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ..-.+++++  +.+....+. ..+.|.+.+|.+||+.|+.+
T Consensus       134 dvSV~~sV~~d~srVkaDi~-~~G~IhCACWT~DG~RLVVA  173 (671)
T PF15390_consen  134 DVSVLPSVHCDSSRVKADIK-TSGLIHCACWTKDGQRLVVA  173 (671)
T ss_pred             ceeEeeeeeeCCceEEEecc-CCceEEEEEecCcCCEEEEE
Confidence            555555554  333333343 56789999999999988754

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.30  E-value=0.2  Score=34.39  Aligned_cols=78  Identities=15%  Similarity=0.203  Sum_probs=48.0

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCC----------CceeE---EEecCCc--CcCCCCceeEEEEcCC---CCE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLET----------GKPVV---RIDSSQF--GVSGGGGINRVVCHPT---LPL   67 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~----------~~~~~---~~~~~~~--~~~~~~~i~~~~~~~~---~~~   67 (116)
                      .|..+..+| +|..++..+..+ |.|..+..          ++...   .+.....  .......|..+.|+|.   +..
T Consensus        86 ~v~~i~~n~-~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   86 EVHQISLNP-TGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eEEEEEECC-CCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            467788899 778877777544 44433321          11111   1110000  0022456889999996   579


Q ss_pred             EEEEeCCCeEEEEECCCC
Q psy17133         68 TITAHDDRHIRFFDNVSG   85 (116)
Q Consensus        68 ~~~~~~d~~i~~~~~~~~   85 (116)
                      ++....|+.+++||+...
T Consensus       164 l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             EEEEecCCEEEEEecCCC
Confidence            999999999999998643

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.29  E-value=0.18  Score=33.81  Aligned_cols=103  Identities=9%  Similarity=0.006  Sum_probs=54.3

Q ss_pred             CceEEEEccCCCcEEEEeeCC-CeEEEEECCCCceeEEEecCCcC--cCCCCceeEEEEcCCCCEEEEEeCCCeEEE---
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN-SACVLFDLETGKPVVRIDSSQFG--VSGGGGINRVVCHPTLPLTITAHDDRHIRF---   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~---   79 (116)
                      ....-.|+| ++..+.+.... ...++.+......+..+......  ....+.|..+.|+|||..++... ++.|.+   
T Consensus       398 ~~t~PsWsp-DG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~V  475 (591)
T PRK13616        398 SLTRPSWSL-DADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVV  475 (591)
T ss_pred             CCCCceECC-CCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEE
Confidence            356778999 66666555432 22223222211122211110000  00134699999999999777665 467777   


Q ss_pred             EECCCCeEEEE-----eec-ccccEEEEEECCCCcEEE
Q psy17133         80 FDNVSGKLVHS-----MVA-HLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        80 ~~~~~~~~~~~-----~~~-~~~~v~~~~~~~~~~~l~  111 (116)
                      -....|+ ...     +.. ....+..+.|..++..++
T Consensus       476 vr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V  512 (591)
T PRK13616        476 EQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDSLVV  512 (591)
T ss_pred             EeCCCCc-eeecccEEeecccCCccccceEecCCEEEE
Confidence            4444454 111     221 223357889999988553

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=96.23  E-value=0.18  Score=33.29  Aligned_cols=37  Identities=11%  Similarity=0.199  Sum_probs=28.5

Q ss_pred             ceeEEEEcC----CCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         55 GINRVVCHP----TLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        55 ~i~~~~~~~----~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      ....+.+++    +..++++.+.|+.+++||+.+++++...
T Consensus       216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred             ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence            455666666    6779999999999999999999986654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PRK10115 protease 2; Provisional

Probab=96.07  E-value=0.27  Score=33.66  Aligned_cols=97  Identities=13%  Similarity=-0.025  Sum_probs=54.8

Q ss_pred             ceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-----C
Q psy17133          7 PTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-----R   75 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-----~   75 (116)
                      +..+.++| ++++|+.+.+     ...+++.|+.++..+......        .-..++|.+|++.++.... +     .
T Consensus       129 l~~~~~Sp-dg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~--------~~~~~~w~~D~~~~~y~~~~~~~~~~~  199 (686)
T PRK10115        129 LGGMAITP-DNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN--------VEPSFVWANDSWTFYYVRKHPVTLLPY  199 (686)
T ss_pred             EeEEEECC-CCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC--------cceEEEEeeCCCEEEEEEecCCCCCCC
Confidence            45678899 6777776532     345778888877533222111        1245899999875554432 2     4


Q ss_pred             eEEEEECCCC--eEEEEeecccccEE-EEEECCCCcEEEe
Q psy17133         76 HIRFFDNVSG--KLVHSMVAHLDAVT-SLAVDPQGLYILS  112 (116)
Q Consensus        76 ~i~~~~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~  112 (116)
                      .++.+++.++  +....+........ ....+.++++++.
T Consensus       200 ~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i  239 (686)
T PRK10115        200 QVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVI  239 (686)
T ss_pred             EEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEE
Confidence            6888888877  33333332222222 2333447776653

>KOG0309|consensus

Probab=96.00  E-value=0.02  Score=38.83  Aligned_cols=94  Identities=12%  Similarity=0.234  Sum_probs=61.0

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ...++|+..+++.+++ +....+.+||...+ .++..++++      ...++.++|..- ...+.+.+.|++|+.|+...
T Consensus       161 asqVkwnyk~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~------vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k  233 (1081)
T KOG0309|consen  161 ASQVKWNYKDPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGH------VSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK  233 (1081)
T ss_pred             CceeeecccCcchhhh-ccCCceEEEeccCCCcceEEeccc------ceeeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence            3457787655555554 44567999999854 577888887      567888888754 44677888999999999864


Q ss_pred             CeEEEE-eecccccEEEEEECCCC
Q psy17133         85 GKLVHS-MVAHLDAVTSLAVDPQG  107 (116)
Q Consensus        85 ~~~~~~-~~~~~~~v~~~~~~~~~  107 (116)
                      ...... ...-..++..-.+-|-|
T Consensus       234 St~e~~~~vtt~~piw~~r~~Pfg  257 (1081)
T KOG0309|consen  234 STTESKRTVTTNFPIWRGRYLPFG  257 (1081)
T ss_pred             cccccceeccccCcceeccccccC
Confidence            322111 11123345555555533

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=95.93  E-value=0.23  Score=31.76  Aligned_cols=48  Identities=19%  Similarity=0.261  Sum_probs=37.9

Q ss_pred             eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133         28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus        28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      .|.+|+.. |+.+..+...      .+.+..+.|..+..++ ....||.++++|+.
T Consensus        62 ~I~iys~s-G~ll~~i~w~------~~~iv~~~wt~~e~Lv-vV~~dG~v~vy~~~  109 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWD------SGRIVGMGWTDDEELV-VVQSDGTVRVYDLF  109 (410)
T ss_pred             EEEEECCC-CCEeEEEEEC------CCCEEEEEECCCCeEE-EEEcCCEEEEEeCC
Confidence            58888875 7788887766      4689999998866555 55589999999986

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG2114|consensus

Probab=95.91  E-value=0.078  Score=36.53  Aligned_cols=95  Identities=11%  Similarity=0.121  Sum_probs=58.9

Q ss_pred             EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----eEEEEECCCC-
Q psy17133         12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----HIRFFDNVSG-   85 (116)
Q Consensus        12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~-   85 (116)
                      |++ ++..++.|+.+|.|.+++.. -+.+..|+.+.     .+.+..+....+..++++.++|.     .+++|+++.. 
T Consensus        31 ~~s-~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~-----~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~  103 (933)
T KOG2114|consen   31 CSS-STGSVVIGTADGRVVILNSS-FQLIRGFQAYE-----QSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD  103 (933)
T ss_pred             EcC-CCceEEEeeccccEEEeccc-ceeeehheecc-----hhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence            466 67888999999999888753 44456777662     12255554444446777766653     5999998632 


Q ss_pred             -----eEE---EEee----cccccEEEEEECCCCcEEEee
Q psy17133         86 -----KLV---HSMV----AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        86 -----~~~---~~~~----~~~~~v~~~~~~~~~~~l~~~  113 (116)
                           .++   +.+.    ....++..++.+.+-+.++.|
T Consensus       104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~G  143 (933)
T KOG2114|consen  104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCG  143 (933)
T ss_pred             CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEE
Confidence                 122   1111    123466777777776766655

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.84  E-value=0.17  Score=29.50  Aligned_cols=72  Identities=13%  Similarity=0.097  Sum_probs=47.5

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEE------ecC-C-cCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRI------DSS-Q-FGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~------~~~-~-~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      +++++++-..+|.+++||+.+++.+..-      -.. . ........|..+.++.+|..+++-+ ++..+.|+..-+.-
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~~W   99 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLGCW   99 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccccee
Confidence            5578888899999999999977653321      000 0 0001245688889998898777765 46778888664443


Q ss_pred             E
Q psy17133         88 V   88 (116)
Q Consensus        88 ~   88 (116)
                      +
T Consensus       100 ~  100 (219)
T PF07569_consen  100 I  100 (219)
T ss_pred             E
Confidence            3

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG1008|consensus

Probab=95.83  E-value=0.0011  Score=43.56  Aligned_cols=105  Identities=21%  Similarity=0.275  Sum_probs=66.6

Q ss_pred             CCCCceEEEEccCCCcEEEEee----CCCeEEEEECCCC--cee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF----DNSACVLFDLETG--KPV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~--~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      +....++++|++-+.+.|+.|-    .+..+.|||..++  .+.  ..|....     .....+++|-.+.+++.+|...
T Consensus       101 ~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~-----l~gqns~cwlrd~klvlaGm~s  175 (783)
T KOG1008|consen  101 YARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSST-----LDGQNSVCWLRDTKLVLAGMTS  175 (783)
T ss_pred             ccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccccc-----ccCccccccccCcchhhccccc
Confidence            3456788999887777888775    3567999999865  221  1222211     2345688998888999999989


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSG  113 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  113 (116)
                      ..+.++|++........ -....++.+..+| .+.++++-
T Consensus       176 r~~~ifdlRqs~~~~~s-vnTk~vqG~tVdp~~~nY~cs~  214 (783)
T KOG1008|consen  176 RSVHIFDLRQSLDSVSS-VNTKYVQGITVDPFSPNYFCSN  214 (783)
T ss_pred             chhhhhhhhhhhhhhhh-hhhhhcccceecCCCCCceecc
Confidence            99999998732211111 1223455566666 55566543

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.77  E-value=0.26  Score=31.16  Aligned_cols=28  Identities=7%  Similarity=0.223  Sum_probs=22.9

Q ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         65 LPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      +..++.++.++.+...|..+|+.+....
T Consensus       335 ~g~l~v~~~~G~l~~ld~~tG~~~~~~~  362 (394)
T PRK11138        335 NGYLVVGDSEGYLHWINREDGRFVAQQK  362 (394)
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence            4467778889999999999999877665

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.74  E-value=0.2  Score=29.76  Aligned_cols=99  Identities=17%  Similarity=0.183  Sum_probs=58.9

Q ss_pred             CceEEEEccCCCcEEEEee---CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE-
Q psy17133          6 TPTSIDFVRDESTKMVTAF---DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD-   81 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~-   81 (116)
                      .+...+.++ +++.++...   ....++++..  +........       ...+....|++++...+....+...+++. 
T Consensus        25 ~~~s~AvS~-dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~~-------g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~   94 (253)
T PF10647_consen   25 DVTSPAVSP-DGSRVAAVSEGDGGRSLYVGPA--GGPVRPVLT-------GGSLTRPSWDPDGWVWTVDDGSGGVRVVRD   94 (253)
T ss_pred             cccceEECC-CCCeEEEEEEcCCCCEEEEEcC--CCcceeecc-------CCccccccccCCCCEEEEEcCCCceEEEEe
Confidence            577888999 566554433   3444555543  333333221       23578888999988777766666666664 


Q ss_pred             CCCCeEEE-Eee--cccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVH-SMV--AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..++.... ...  .....|..+.++|||..++...
T Consensus        95 ~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~  130 (253)
T PF10647_consen   95 SASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVV  130 (253)
T ss_pred             cCCCcceeEEecccccCCceEEEEECCCCcEEEEEE
Confidence            33333221 121  1122799999999999877543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=95.72  E-value=0.26  Score=30.72  Aligned_cols=85  Identities=12%  Similarity=0.072  Sum_probs=53.6

Q ss_pred             CCceEEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecC---CcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSS---QFGVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      +..-.+..+| +++.+.++.          ....|.+||..+-.+..++.-.   +..  .......+.++.++++++..
T Consensus        36 g~~~~~~~sp-dgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~--~~~~~~~~~ls~dgk~~~V~  112 (342)
T PF06433_consen   36 GFLGNVALSP-DGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ--VVPYKNMFALSADGKFLYVQ  112 (342)
T ss_dssp             ESSEEEEE-T-TSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B----BS--GGGEEE-TTSSEEEEE
T ss_pred             ccCCceeECC-CCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe--ecccccceEEccCCcEEEEE
Confidence            3445577888 667666532          2346899999988777765432   110  01123456888999987765


Q ss_pred             e--CCCeEEEEECCCCeEEEEee
Q psy17133         72 H--DDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        72 ~--~d~~i~~~~~~~~~~~~~~~   92 (116)
                      .  -...|.+.|++.++.+..+.
T Consensus       113 N~TPa~SVtVVDl~~~kvv~ei~  135 (342)
T PF06433_consen  113 NFTPATSVTVVDLAAKKVVGEID  135 (342)
T ss_dssp             EESSSEEEEEEETTTTEEEEEEE
T ss_pred             ccCCCCeEEEEECCCCceeeeec
Confidence            4  45789999999888777654

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.65  E-value=0.25  Score=30.11  Aligned_cols=103  Identities=13%  Similarity=0.148  Sum_probs=65.7

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +..+.++.|+| +.+.|++........++=...|+.+.+++-..     -.....+.+--++.++++--.+..+.++.+.
T Consensus        85 ~~nvS~LTynp-~~rtLFav~n~p~~iVElt~~GdlirtiPL~g-----~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          85 TANVSSLTYNP-DTRTLFAVTNKPAAIVELTKEGDLIRTIPLTG-----FSDPETIEYIGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             cccccceeeCC-CcceEEEecCCCceEEEEecCCceEEEecccc-----cCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence            34588999999 56666665555555555445688888876542     1345667777778888877778888888765


Q ss_pred             CCeEEE-------Ee---ecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVH-------SM---VAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~-------~~---~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ......       .+   .........++|+|....|..
T Consensus       159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~  197 (316)
T COG3204         159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFV  197 (316)
T ss_pred             CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEE
Confidence            431111       11   111445778999997766654

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=95.64  E-value=0.2  Score=28.97  Aligned_cols=73  Identities=15%  Similarity=0.087  Sum_probs=49.1

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA   93 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~   93 (116)
                      ..++++..++.++.+|..+|+.+... ......   ...........++..++.+..++.+..+|.++|+.+.....
T Consensus        77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~  150 (238)
T PF13360_consen   77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPP---AGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV  150 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCT---CSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred             cccccccceeeeEecccCCcceeeeeccccccc---cccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence            55666667779999999999988774 332110   11112222222377888888899999999999999877654

...

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.54  E-value=0.28  Score=29.95  Aligned_cols=95  Identities=15%  Similarity=0.230  Sum_probs=60.6

Q ss_pred             EEccCCCcEEEEeeC-----CCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------C----
Q psy17133         11 DFVRDESTKMVTAFD-----NSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------D----   74 (116)
Q Consensus        11 ~~~~~~~~~l~~~~~-----~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------d----   74 (116)
                      .|+| ++.+|...-.     .+.|-+||...+ +.+.++..+      .-....+.+.+||+.++.+..      |    
T Consensus       120 vfs~-dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~------GiGpHev~lm~DGrtlvvanGGIethpdfgR~  192 (366)
T COG3490         120 VFSP-DGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTH------GIGPHEVTLMADGRTLVVANGGIETHPDFGRT  192 (366)
T ss_pred             ccCC-CCcEEEeecCCCCCCCceEEEEecccccceecccccC------CcCcceeEEecCCcEEEEeCCceecccccCcc
Confidence            4777 6676665432     356788998743 456777777      345778999999998887654      1    


Q ss_pred             --------CeEEEEECCCCeEEEEe--e--cccccEEEEEECCCCcEEEe
Q psy17133         75 --------RHIRFFDNVSGKLVHSM--V--AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        75 --------~~i~~~~~~~~~~~~~~--~--~~~~~v~~~~~~~~~~~l~~  112 (116)
                              -.+.+.|-.+|.++.+.  .  .+...++.+...+||..++.
T Consensus       193 ~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfg  242 (366)
T COG3490         193 ELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFG  242 (366)
T ss_pred             ccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEE
Confidence                    12444554555554332  2  23346788888888877654

>KOG3630|consensus

Probab=95.50  E-value=0.084  Score=37.67  Aligned_cols=98  Identities=5%  Similarity=-0.045  Sum_probs=63.7

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      ..++.|+|.=....++...|+.|++..+.-. +.+..++.       ....++++|+|.|+.++.+-..|++.-|... .
T Consensus       158 ~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~-------t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-l  229 (1405)
T KOG3630|consen  158 QLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPV-------TNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-L  229 (1405)
T ss_pred             cccccccCCccchhhhhccccchhhhhhhhhhhhhcccCc-------ccceeeEEeccccceeeEecCCCeEEEeecc-c
Confidence            3456677632334455566777777665422 22223332       2468999999999999999999999988754 3


Q ss_pred             eEEEEeec----ccccEEEEEECCCCcEEEe
Q psy17133         86 KLVHSMVA----HLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        86 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~  112 (116)
                      +....+..    ...+|.+++|-....+++.
T Consensus       230 eik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  230 EIKSEIPEPPVEENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             ceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence            33333321    2367899999888777764

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.48  E-value=0.35  Score=30.68  Aligned_cols=96  Identities=15%  Similarity=0.178  Sum_probs=44.6

Q ss_pred             EEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133         10 IDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----------   74 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----------   74 (116)
                      --|.| +|..+..-+     .+..|.-++..+++........        ...-+-.++|+++++-=+.|          
T Consensus       243 Efw~~-DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~p--------~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~  313 (386)
T PF14583_consen  243 EFWVP-DGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLMEMP--------WCSHFMSSPDGKLFVGDGGDAPVDVADAGG  313 (386)
T ss_dssp             EEE-T-TSS-EEEEEEETTT--EEEEEE-TTT--EEEEEEE---------SEEEEEE-TTSSEEEEEE------------
T ss_pred             ccccC-CCCEEEEEeecCCCCceEEEeeCCCCCCceEEEeCC--------ceeeeEEcCCCCEEEecCCCCCcccccccc
Confidence            34677 556554422     2334666777776543322222        23345556888887663333          


Q ss_pred             ------CeEEEEECCCCeEEEEee---------cccc-cEEEEEECCCCcEEEeee
Q psy17133         75 ------RHIRFFDNVSGKLVHSMV---------AHLD-AVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ------~~i~~~~~~~~~~~~~~~---------~~~~-~v~~~~~~~~~~~l~~~s  114 (116)
                            -.|.+++++.+.......         ++.. .=-...|+||+++++-.|
T Consensus       314 ~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S  369 (386)
T PF14583_consen  314 YKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS  369 (386)
T ss_dssp             -------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE
T ss_pred             ceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC
Confidence                  256778887766533222         1111 124678999999987554

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=95.41  E-value=0.32  Score=30.74  Aligned_cols=66  Identities=11%  Similarity=0.146  Sum_probs=44.9

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN-RVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ..++.++.++.++.+|.++|+.+-+.+...       .+. ...+  .+..++.+..++.+..+|.++|+.+....
T Consensus       121 ~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-------~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~  187 (394)
T PRK11138        121 GKVYIGSEKGQVYALNAEDGEVAWQTKVAG-------EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVN  187 (394)
T ss_pred             CEEEEEcCCCEEEEEECCCCCCcccccCCC-------ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence            456667778899999999998877665431       111 1111  13456667778899999999998876654

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.38  E-value=0.077  Score=22.47  Aligned_cols=31  Identities=16%  Similarity=0.176  Sum_probs=25.2

Q ss_pred             ceeEEEEcCCC---CEEEEEeCCCeEEEEECCCC
Q psy17133         55 GINRVVCHPTL---PLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus        55 ~i~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~   85 (116)
                      .+.++.|+|+.   .+++.+-..+.+.++|+++.
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~   35 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN   35 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence            47889999864   48888888899999999853

It contains a characteristic DLL sequence motif.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=95.32  E-value=0.073  Score=21.84  Aligned_cols=40  Identities=13%  Similarity=0.168  Sum_probs=26.9

Q ss_pred             CCCCEEEEEe-CCCeEEEEECCCCeEEEEeecccccEEEEEE
Q psy17133         63 PTLPLTITAH-DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAV  103 (116)
Q Consensus        63 ~~~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~  103 (116)
                      |+++.++.+. .++.|.++|..+++.+..+.. ......++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence            5666555544 578999999998888777664 233445554

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=95.12  E-value=0.49  Score=30.32  Aligned_cols=55  Identities=9%  Similarity=0.055  Sum_probs=40.4

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCc
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGL  108 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~  108 (116)
                      +.+..++++|+++++|.-..+|.+.+....-.+.+..+... ......|.|.-+.-
T Consensus       217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da  272 (410)
T PF04841_consen  217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA  272 (410)
T ss_pred             CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence            57999999999999999999999999876655554444422 34566777766543

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=95.09  E-value=0.73  Score=32.08  Aligned_cols=100  Identities=7%  Similarity=0.078  Sum_probs=62.1

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCce----eEEEe-cCCcC----cCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP----VVRID-SSQFG----VSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~----~~~~~-~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      +..+++|+|.+...++.....|...+|++.....    ...+. ...+.    ......-..+.|.++...++.++ ...
T Consensus       147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r~~  225 (765)
T PF10214_consen  147 PHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-RSK  225 (765)
T ss_pred             ccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-CCc
Confidence            4578999998888999999999999999931111    11111 11000    00112334788887766666664 567


Q ss_pred             EEEEECCCCeEEE-Ee-ecccccEEEEEECCC
Q psy17133         77 IRFFDNVSGKLVH-SM-VAHLDAVTSLAVDPQ  106 (116)
Q Consensus        77 i~~~~~~~~~~~~-~~-~~~~~~v~~~~~~~~  106 (116)
                      +.++|+++..... .. ......+.++.-+|.
T Consensus       226 l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~  257 (765)
T PF10214_consen  226 LMLIDFESNWQTEYLVTAKTWSWILDVKRSPD  257 (765)
T ss_pred             eEEEECCCCCccchhccCCChhheeeEEecCC
Confidence            8889998776533 22 223457888877776

These proteins are found in fungi.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=95.05  E-value=0.51  Score=30.13  Aligned_cols=78  Identities=9%  Similarity=0.132  Sum_probs=50.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCcCCCCceeEEEEcC-----CC---CEEEEEeC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGVSGGGGINRVVCHP-----TL---PLTITAHD   73 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~-----~~---~~~~~~~~   73 (116)
                      .++|++++.+  +=-+++.|.++|.+.+.|++....+..-....  ........++++.|..     |+   ..+++|.+
T Consensus        86 ~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn  163 (395)
T PF08596_consen   86 QGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTN  163 (395)
T ss_dssp             S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEET
T ss_pred             CCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeC
Confidence            5889999986  44799999999999999998665554422111  0011134577777752     33   36788888


Q ss_pred             CCeEEEEECC
Q psy17133         74 DRHIRFFDNV   83 (116)
Q Consensus        74 d~~i~~~~~~   83 (116)
                      .|.+.+|.+.
T Consensus       164 ~G~v~~fkIl  173 (395)
T PF08596_consen  164 SGNVLTFKIL  173 (395)
T ss_dssp             TSEEEEEEEE
T ss_pred             CCCEEEEEEe
Confidence            9999999764

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2247|consensus

Probab=95.05  E-value=0.0034  Score=40.29  Aligned_cols=101  Identities=15%  Similarity=0.220  Sum_probs=68.0

Q ss_pred             CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ++...+++|.. +++.+ +.+-..+.+++||+.+... ..++.+.       ..-.-+.|++-.+.++.+...+.+.+++
T Consensus        74 tg~aldm~wDk-egdvlavlAek~~piylwd~n~eytqqLE~gg~-------~s~sll~wsKg~~el~ig~~~gn~viyn  145 (615)
T KOG2247|consen   74 TGKALDMAWDK-EGDVLAVLAEKTGPIYLWDVNSEYTQQLESGGT-------SSKSLLAWSKGTPELVIGNNAGNIVIYN  145 (615)
T ss_pred             chhHhhhhhcc-ccchhhhhhhcCCCeeechhhhhhHHHHhccCc-------chHHHHhhccCCccccccccccceEEEe
Confidence            34456677777 55544 4455678899999975432 2223232       1223377888888888888889999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ..+.+..-....|..++..+++.+.+..+..
T Consensus       146 hgtsR~iiv~Gkh~RRgtq~av~lEd~vil~  176 (615)
T KOG2247|consen  146 HGTSRRIIVMGKHQRRGTQIAVTLEDYVILC  176 (615)
T ss_pred             ccchhhhhhhcccccceeEEEecccceeeec
Confidence            8776655444447778889999888765543

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.98  E-value=0.37  Score=28.11  Aligned_cols=54  Identities=13%  Similarity=0.109  Sum_probs=38.8

Q ss_pred             EcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-------e-------cccccEEEEEECCCCcEEEeee
Q psy17133         61 CHPTLPLTITAHDDRHIRFFDNVSGKLVHSM-------V-------AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        61 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +..++.++.+...+|.+++||+.+++.+..-       .       .....|..+..+.+|.-+++-+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls   85 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS   85 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe
Confidence            4456888999999999999999987764332       1       1334677778888887666544

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG2444|consensus

Probab=94.95  E-value=0.16  Score=29.66  Aligned_cols=64  Identities=9%  Similarity=0.102  Sum_probs=43.7

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE--eCCCeEEEEECCC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA--HDDRHIRFFDNVS   84 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~d~~i~~~~~~~   84 (116)
                      ++.+..++..++.++.|+..-++.+...-.|..     ...........++.++.+  +.+..++.|+++.
T Consensus       113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~-----~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF-----ESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ccceeEEeccCCceeeeccccCceeeeeccccC-----CCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            344777888899999999987776655555521     334455555566667666  7788888888764

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.85  E-value=0.56  Score=29.53  Aligned_cols=59  Identities=15%  Similarity=0.137  Sum_probs=36.8

Q ss_pred             CceeEEEEcCCCCEEEEEeCC-------------------CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         54 GGINRVVCHPTLPLTITAHDD-------------------RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d-------------------~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .....+.+.|||.+.++.+..                   +.+.-++..+++.. .+...-.....++|+|+|+++++-
T Consensus       124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e-~~a~G~rnp~Gl~~d~~G~l~~td  201 (367)
T TIGR02604       124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLR-VVAHGFQNPYGHSVDSWGDVFFCD  201 (367)
T ss_pred             ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeEE-EEecCcCCCccceECCCCCEEEEc
Confidence            347789999999876654421                   34555565544432 333222335689999999988753

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=94.83  E-value=0.51  Score=29.01  Aligned_cols=60  Identities=12%  Similarity=0.110  Sum_probs=34.7

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+.+..+...+++++++.+..-..+.-|+.-...-...-+....++..|.|.|++...+.
T Consensus       144 ~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~  203 (302)
T PF14870_consen  144 SGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWML  203 (302)
T ss_dssp             ---EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEE
T ss_pred             cceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEE
Confidence            456888888999999988877777778886433222223334578999999999886554

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=94.81  E-value=0.67  Score=30.23  Aligned_cols=109  Identities=15%  Similarity=0.147  Sum_probs=59.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCC------CEEEEEe---
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTL------PLTITAH---   72 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~---   72 (116)
                      ...+..+.|.| ++.++++--..++|++++..++..  +..+..... ....+....++++|+-      .+++...   
T Consensus        29 L~~Pw~maflP-DG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~-~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~  106 (454)
T TIGR03606        29 LNKPWALLWGP-DNQLWVTERATGKILRVNPETGEVKVVFTLPEIVN-DAQHNGLLGLALHPDFMQEKGNPYVYISYTYK  106 (454)
T ss_pred             CCCceEEEEcC-CCeEEEEEecCCEEEEEeCCCCceeeeecCCceec-cCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence            35678899999 777766655468999988654432  211111000 0014668999999873      2444332   


Q ss_pred             -------CCCeEEEEECCCC--e---EEEEeec----ccccEEEEEECCCCcEEEeee
Q psy17133         73 -------DDRHIRFFDNVSG--K---LVHSMVA----HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 -------~d~~i~~~~~~~~--~---~~~~~~~----~~~~v~~~~~~~~~~~l~~~s  114 (116)
                             ....|.-|.+...  .   ....+..    ..+.-..|.|.|||.++++.+
T Consensus       107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~G  164 (454)
T TIGR03606       107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIG  164 (454)
T ss_pred             CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEEC
Confidence                   1234544554311  1   1111211    112345788999998776544

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>KOG0882|consensus

Probab=94.75  E-value=0.68  Score=30.06  Aligned_cols=88  Identities=9%  Similarity=0.044  Sum_probs=60.9

Q ss_pred             eCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC------CeEEEEe-----
Q psy17133         24 FDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS------GKLVHSM-----   91 (116)
Q Consensus        24 ~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~------~~~~~~~-----   91 (116)
                      ..++.+.++|-.... +..-++.-     |..+|..+.+.+.+..+.+....|-|.-|..+.      .+....+     
T Consensus       119 ~~sg~i~VvD~~~d~~q~~~fkkl-----H~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTd  193 (558)
T KOG0882|consen  119 FKSGKIFVVDGFGDFCQDGYFKKL-----HFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETD  193 (558)
T ss_pred             ccCCCcEEECCcCCcCccceeccc-----ccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccch
Confidence            468889999976432 44444332     167899999999999999998899999998762      1111111     


Q ss_pred             ----ecccccEEEEEECCCCcEEEeeecC
Q psy17133         92 ----VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        92 ----~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                          ........++.|+|++..+.+.+.|
T Consensus       194 Ly~f~K~Kt~pts~Efsp~g~qistl~~D  222 (558)
T KOG0882|consen  194 LYGFPKAKTEPTSFEFSPDGAQISTLNPD  222 (558)
T ss_pred             hhcccccccCccceEEccccCcccccCcc
Confidence                1223456889999999988765543

>KOG4460|consensus

Probab=94.68  E-value=0.72  Score=30.71  Aligned_cols=81  Identities=15%  Similarity=0.159  Sum_probs=47.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEE---------CCCCceeEEEecCCcC---c--CCCCceeEEEEcCCC---CEEE
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFD---------LETGKPVVRIDSSQFG---V--SGGGGINRVVCHPTL---PLTI   69 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~---------~~~~~~~~~~~~~~~~---~--~~~~~i~~~~~~~~~---~~~~   69 (116)
                      |..+..++ .|..++.++.+|-+.++-         .++|+.+.....-.-.   .  ...-.+..++|+|+.   ..+.
T Consensus       106 V~~vl~s~-~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  106 VYQVLLSP-TGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEecC-CCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            45566777 677776666676655433         1244433222111000   0  001235678999975   5888


Q ss_pred             EEeCCCeEEEEECCCCeEE
Q psy17133         70 TAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus        70 ~~~~d~~i~~~~~~~~~~~   88 (116)
                      ....|+.+++|++..-..+
T Consensus       185 iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  185 LLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEecCcEEEEEecCCcchh
Confidence            8889999999998654433

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=94.66  E-value=0.63  Score=29.29  Aligned_cols=101  Identities=14%  Similarity=0.132  Sum_probs=55.9

Q ss_pred             CCCceEEEEccCCCcEEEEee-----------CCC-eEEEEECC--CCce--eEEEecCCcCcCCCCceeEEEEcCCCCE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-----------DNS-ACVLFDLE--TGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPL   67 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-----------~~~-~v~i~~~~--~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~   67 (116)
                      ...+..++|.+ +++++++-.           ..+ .|.+++-.  +++.  ...+...      ......+++.+++ +
T Consensus        13 ~~~P~~ia~d~-~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~------l~~p~Gi~~~~~G-l   84 (367)
T TIGR02604        13 LRNPIAVCFDE-RGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEE------LSMVTGLAVAVGG-V   84 (367)
T ss_pred             cCCCceeeECC-CCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecC------CCCccceeEecCC-E
Confidence            45678899998 778777642           122 67777643  2332  2333322      2346788898888 4


Q ss_pred             EEEEeCCCeEEEE-ECCC-------CeEEE-Eeecc----cccEEEEEECCCCcEEEeee
Q psy17133         68 TITAHDDRHIRFF-DNVS-------GKLVH-SMVAH----LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        68 ~~~~~~d~~i~~~-~~~~-------~~~~~-~~~~~----~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++ +... .|..+ +...       .+.+. .+...    ......++|.|||++.++.+
T Consensus        85 yV-~~~~-~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        85 YV-ATPP-DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EE-eCCC-eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            44 3333 34434 4321       11121 12221    23467899999998766543

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.66  E-value=0.57  Score=31.10  Aligned_cols=51  Identities=20%  Similarity=0.270  Sum_probs=37.5

Q ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .-+++.++..|.|++||--..+....+.+-...|..+..+.+|++++..|.
T Consensus       573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk  623 (776)
T COG5167         573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK  623 (776)
T ss_pred             CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec
Confidence            348899999999999995433333345555667888888999998876654

>KOG2377|consensus

Probab=94.65  E-value=0.73  Score=30.16  Aligned_cols=55  Identities=5%  Similarity=0.073  Sum_probs=40.4

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE----eecccccEEEEEECCCC
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS----MVAHLDAVTSLAVDPQG  107 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~  107 (116)
                      .+.|.++.|++|.+.++..-.+++|.+++....+....    .+.....|.+++|+...
T Consensus        66 ~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~  124 (657)
T KOG2377|consen   66 KGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSST  124 (657)
T ss_pred             CCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCe
Confidence            56899999999999999999999999999753332222    22233457888887653

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=94.41  E-value=0.79  Score=29.34  Aligned_cols=83  Identities=11%  Similarity=0.188  Sum_probs=50.7

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE------EEe-------cC--CcC---------------------
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV------RID-------SS--QFG---------------------   49 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~------~~~-------~~--~~~---------------------   49 (116)
                      .|..+.|.+ +..-++++...|.|.+|....++.-.      ...       ..  ...                     
T Consensus         3 ~v~~vs~a~-~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l   81 (395)
T PF08596_consen    3 SVTHVSFAP-ETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL   81 (395)
T ss_dssp             -EEEEEEET-TTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred             eEEEEEecC-CCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence            578899998 66778888888998887654221110      000       00  000                     


Q ss_pred             -cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Q psy17133         50 -VSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS   90 (116)
Q Consensus        50 -~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~   90 (116)
                       ....+.|++++.+ |--+++.+.++|.+.+.|++....+..
T Consensus        82 ~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~  122 (395)
T PF08596_consen   82 LDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN  122 (395)
T ss_dssp             E---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             eeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee
Confidence             0235678888875 444899999999999999987776665

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=94.37  E-value=0.66  Score=31.18  Aligned_cols=68  Identities=10%  Similarity=0.087  Sum_probs=40.0

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCC-C-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLET-G-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV   83 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~   83 (116)
                      ..+.|+| ....|++-.....-.++++.. + +....+++       .+.|.+.+|.+||..++. .+..-.-++||-.
T Consensus       116 QGCVWHP-k~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~-------~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  116 QGCVWHP-KKAILTVLTARDVSVLPSVHCDSSRVKADIKT-------SGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             CcccccC-CCceEEEEecCceeEeeeeeeCCceEEEeccC-------CceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            4567888 656665544332222334432 2 22333433       478999999999875544 4445567888854

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=94.23  E-value=1  Score=29.96  Aligned_cols=78  Identities=14%  Similarity=0.080  Sum_probs=46.5

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~  105 (116)
                      +.+.-+|+.+++.+-..+....      ...+. +.-.+.+++.+..++.++.+|.++|+.+......... -.=+.|.-
T Consensus       441 g~l~AiD~~tGk~~W~~~~~~p------~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~  513 (527)
T TIGR03075       441 GSLIAWDPITGKIVWEHKEDFP------LWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQ  513 (527)
T ss_pred             eeEEEEeCCCCceeeEecCCCC------CCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEe
Confidence            4577788888876665543311      11111 1124456777888999999999999998877643221 11233345


Q ss_pred             CCcEEE
Q psy17133        106 QGLYIL  111 (116)
Q Consensus       106 ~~~~l~  111 (116)
                      +|+..+
T Consensus       514 ~G~qYv  519 (527)
T TIGR03075       514 DGKQYV  519 (527)
T ss_pred             CCEEEE
Confidence            666443

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=94.19  E-value=0.16  Score=20.55  Aligned_cols=21  Identities=29%  Similarity=0.254  Sum_probs=14.7

Q ss_pred             ccccEEEEEECCCCcEEEeee
Q psy17133         94 HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        94 ~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ....-....|+|||++|+-.+
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s   27 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTS   27 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEE
T ss_pred             CCccccCEEEecCCCEEEEEe
Confidence            344567789999999987554

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=94.14  E-value=0.34  Score=24.06  Aligned_cols=38  Identities=13%  Similarity=0.202  Sum_probs=27.2

Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +|.+..||..+++....+.+ -.....++.++|+.+++.
T Consensus        36 ~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv   73 (89)
T PF03088_consen   36 TGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLV   73 (89)
T ss_dssp             -EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEE
T ss_pred             CcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEE
Confidence            47788999998876555543 345789999999997764

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.14  E-value=0.29  Score=31.38  Aligned_cols=42  Identities=12%  Similarity=0.083  Sum_probs=35.2

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH   94 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~   94 (116)
                      ...+.+++.+|++++.++...=|.|.++|+.++..++.+++.
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY  348 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY  348 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence            446788999999999998877899999999998877777643

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.70  E-value=0.22  Score=20.34  Aligned_cols=31  Identities=19%  Similarity=0.281  Sum_probs=22.3

Q ss_pred             CCcEEEEe-eCCCeEEEEECCCCceeEEEecC
Q psy17133         16 ESTKMVTA-FDNSACVLFDLETGKPVVRIDSS   46 (116)
Q Consensus        16 ~~~~l~~~-~~~~~v~i~~~~~~~~~~~~~~~   46 (116)
                      +++.++++ ..++.|.++|..+++.+..+...
T Consensus         2 d~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg   33 (42)
T TIGR02276         2 DGTKLYVTNSGSNTVSVIDTATNKVIATIPVG   33 (42)
T ss_pred             CCCEEEEEeCCCCEEEEEECCCCeEEEEEECC
Confidence            44555554 46889999999888877777654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=93.65  E-value=0.55  Score=31.15  Aligned_cols=61  Identities=13%  Similarity=0.105  Sum_probs=44.7

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...++++++..|.|++||--..+....+++-      ...|..+....+|+++++.+ ..++.+-|++
T Consensus       572 esGyIa~as~kGDirLyDRig~rAKtalP~l------G~aIk~idvta~Gk~ilaTC-k~yllL~d~~  632 (776)
T COG5167         572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGL------GDAIKHIDVTANGKHILATC-KNYLLLTDVP  632 (776)
T ss_pred             cCceEEEecCCCceeeehhhcchhhhcCccc------ccceeeeEeecCCcEEEEee-cceEEEEecc
Confidence            4468899999999999997654444445544      34688999999999877665 4567777654

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.49  E-value=0.86  Score=26.56  Aligned_cols=46  Identities=15%  Similarity=0.226  Sum_probs=33.3

Q ss_pred             EEEEEeCCCeEEEEECC--CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         67 LTITAHDDRHIRFFDNV--SGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .+..+.....|.+|++.  ..+.+..+.. -+.|..+.++..|++++|-
T Consensus        30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTl   77 (215)
T PF14761_consen   30 ALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTL   77 (215)
T ss_pred             eEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEE
Confidence            33333556789999987  3445556653 3679999999999999874

>PRK10115 protease 2; Provisional

Probab=93.33  E-value=0.44  Score=32.65  Aligned_cols=57  Identities=14%  Similarity=0.165  Sum_probs=37.8

Q ss_pred             ceeEEEEcCCCCEEEEEeC-----CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         55 GINRVVCHPTLPLTITAHD-----DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .+..+.++|++++++.+.+     ...+++.|+.+++.+.......  -..++|.+|++.|+-.
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~  189 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYV  189 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEE
Confidence            4667889999998876533     3468899998886432221111  1458999998876644

>KOG1916|consensus

Probab=93.30  E-value=0.038  Score=38.41  Aligned_cols=109  Identities=14%  Similarity=0.171  Sum_probs=58.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcC---CCCEEEEEeCCCeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHP---TLPLTITAHDDRHIR   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~d~~i~   78 (116)
                      .|.+..+.|...+...+.  -.-+.+.+|++.  .|+....+..+... .....+.-+.|.|   +..+++.+-.++.++
T Consensus       132 ~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~-p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~  208 (1283)
T KOG1916|consen  132 PGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPIT-PYGSDPQLVSWCPIAVNKVYICYGLKGGEIR  208 (1283)
T ss_pred             CCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecC-cCCCCcceeeecccccccceeeeccCCCcee
Confidence            456666666443333333  334667888875  34432222211000 0023455666665   455777777778877


Q ss_pred             EEECCCCeEEEEeecccccEEEE-----------EECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSL-----------AVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~s~d  116 (116)
                      +-.+..... ..+..|..++..+           ..+|||..+++++.|
T Consensus       209 lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~d  256 (1283)
T KOG1916|consen  209 LLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISD  256 (1283)
T ss_pred             EeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecC
Confidence            766543221 2233344443333           258999999988765

>KOG1008|consensus

Probab=93.29  E-value=0.014  Score=38.70  Aligned_cols=91  Identities=14%  Similarity=0.281  Sum_probs=55.2

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEEEEC-CC
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRFFDN-VS   84 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~~~~-~~   84 (116)
                      ..++|.. +.+.+++|...+.++++|++.. .....+..        ..+..+.+.| .+.++++-. |+.+-+||. .+
T Consensus       158 ns~cwlr-d~klvlaGm~sr~~~ifdlRqs~~~~~svnT--------k~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rn  227 (783)
T KOG1008|consen  158 NSVCWLR-DTKLVLAGMTSRSVHIFDLRQSLDSVSSVNT--------KYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRN  227 (783)
T ss_pred             ccccccc-Ccchhhcccccchhhhhhhhhhhhhhhhhhh--------hhcccceecCCCCCceeccc-cCceeeccchhh
Confidence            3566765 5567777777778999988722 22222222        2466777888 566776665 999999993 32


Q ss_pred             CeE-EEEeec----ccccEEEEEECCCCc
Q psy17133         85 GKL-VHSMVA----HLDAVTSLAVDPQGL  108 (116)
Q Consensus        85 ~~~-~~~~~~----~~~~v~~~~~~~~~~  108 (116)
                      -+. ++++..    ....+..++|.|...
T Consensus       228 ienpl~~i~~~~N~~~~~l~~~aycPtrt  256 (783)
T KOG1008|consen  228 IENPLQIILRNENKKPKQLFALAYCPTRT  256 (783)
T ss_pred             hccHHHHHhhCCCCcccceeeEEeccCCc
Confidence            221 222211    123578889988643

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=93.22  E-value=1.2  Score=27.57  Aligned_cols=102  Identities=18%  Similarity=0.313  Sum_probs=60.4

Q ss_pred             eEEEEccCCCcEEEEeeCC------CeEEEEECCCCceeEEEecCC---------cCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          8 TSIDFVRDESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQ---------FGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      .++.+.+ ++.++++.-.+      ..|..++.. |+....+....         .....+..+.+++++|+++.++++.
T Consensus        88 Egi~~~~-~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~  165 (326)
T PF13449_consen   88 EGIAVPP-DGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM  165 (326)
T ss_pred             hHeEEec-CCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence            4677755 66777765556      778888876 66555542111         1122355688999999999655543


Q ss_pred             C-----CC--e-------EEE--EECCC-CeEEEE----eec-----ccccEEEEEECCCCcEEE
Q psy17133         73 D-----DR--H-------IRF--FDNVS-GKLVHS----MVA-----HLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        73 ~-----d~--~-------i~~--~~~~~-~~~~~~----~~~-----~~~~v~~~~~~~~~~~l~  111 (116)
                      +     |+  .       +++  +|..+ ++....    +..     ....+..+.+-+++++|+
T Consensus       166 E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLv  230 (326)
T PF13449_consen  166 ESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLV  230 (326)
T ss_pred             CccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEE
Confidence            3     21  1       444  45444 322222    221     345788899999988765

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=92.96  E-value=1.2  Score=26.61  Aligned_cols=61  Identities=18%  Similarity=0.259  Sum_probs=42.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      .++.|+.|.++| +++++.........+...       ..|..+...|+-..++..+ |+.+.++++..-
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~-------~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l   66 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKL-------SSITQLSVLPELNLLLVLS-DGQLYVYDLDSL   66 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEeec-------ceEEEEEEecccCEEEEEc-CCccEEEEchhh
Confidence            457888888887 899998433333333222       2488999988877666665 499999997643

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=92.93  E-value=1.3  Score=26.82  Aligned_cols=97  Identities=19%  Similarity=0.188  Sum_probs=59.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec--
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA--   93 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--   93 (116)
                      +++.|+.+.....++++|..+.+.+..+...... ..-..++.+.+. +|.+.|-.=....|...|..+|+....+..  
T Consensus       138 dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g-~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~  215 (264)
T PF05096_consen  138 DGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNG-RPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSG  215 (264)
T ss_dssp             CSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETT-EE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HH
T ss_pred             CCCEEEEECCccceEEECCcccceEEEEEEEECC-EECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhH
Confidence            4566666666778999999888777766543210 001245666665 576666666678899999999998876631  


Q ss_pred             --------c-----cccEEEEEECCCCcEEEeee
Q psy17133         94 --------H-----LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        94 --------~-----~~~v~~~~~~~~~~~l~~~s  114 (116)
                              .     ..-...++++|..+.|...+
T Consensus       216 L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG  249 (264)
T PF05096_consen  216 LRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG  249 (264)
T ss_dssp             HHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred             hhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence                    0     23468999998766554443

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=92.74  E-value=1.9  Score=28.40  Aligned_cols=74  Identities=22%  Similarity=0.141  Sum_probs=45.8

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee--EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN--RVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ..++.++.++.++-.|..+++.+-.+............+.  .+.+. ++..++.++.++.|..+|.++|+.+....
T Consensus        62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~  137 (488)
T cd00216          62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFG  137 (488)
T ss_pred             CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeec
Confidence            4556667788999999999987766654311000000000  11111 22567777789999999999998876654

The alignment model contains an 8-bladed beta-propeller.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=92.63  E-value=1.5  Score=26.99  Aligned_cols=99  Identities=13%  Similarity=0.092  Sum_probs=54.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      .++|+++.-..  +. ++++. +..+.+|++...+ .+..-..+.     ...+.++...  +.+++.+.....+.++..
T Consensus        88 ~g~V~ai~~~~--~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~-----~~~i~sl~~~--~~~I~vgD~~~sv~~~~~  156 (321)
T PF03178_consen   88 KGPVTAICSFN--GR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDS-----PFYITSLSVF--KNYILVGDAMKSVSLLRY  156 (321)
T ss_dssp             SS-EEEEEEET--TE-EEEEE-TTEEEEEEEETTSSEEEEEEE-B-----SSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred             cCcceEhhhhC--CE-EEEee-cCEEEEEEccCcccchhhheecc-----eEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence            56788887553  24 44444 5789999987666 333322221     2345555444  568888888777777644


Q ss_pred             CC-CeEEEEeec--ccccEEEEEECCCCcEEEee
Q psy17133         83 VS-GKLVHSMVA--HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        83 ~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +. ...+..+..  ....+.++.|-++++.++.+
T Consensus       157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~  190 (321)
T PF03178_consen  157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIVG  190 (321)
T ss_dssp             ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEE
T ss_pred             EccCCEEEEEEecCCCccEEEEEEecCCcEEEEE
Confidence            32 333333332  23457788887555555544

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=92.56  E-value=0.68  Score=30.74  Aligned_cols=29  Identities=28%  Similarity=0.403  Sum_probs=24.5

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRID   44 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~   44 (116)
                      +..++++-+.|+.+++||+.+++.+....
T Consensus       229 ~~~~l~tl~~D~~LRiW~l~t~~~~~~~~  257 (547)
T PF11715_consen  229 DDTFLFTLSRDHTLRIWSLETGQCLATID  257 (547)
T ss_dssp             TTTEEEEEETTSEEEEEETTTTCEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeEEEEec
Confidence            45788899999999999999998866553

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>smart00564 PQQ beta-propeller repeat

Probab=92.36  E-value=0.32  Score=18.68  Aligned_cols=25  Identities=12%  Similarity=0.135  Sum_probs=19.9

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEE
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVR   42 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~   42 (116)
                      ..++.++.++.++.+|..+|+.+-.
T Consensus         7 ~~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        7 GTVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             CEEEEEcCCCEEEEEEcccCcEEEE
Confidence            3677778899999999988877654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>KOG2280|consensus

Probab=92.31  E-value=2.6  Score=29.39  Aligned_cols=49  Identities=14%  Similarity=0.194  Sum_probs=36.3

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ..|.||+.. |+.+..+...      .+.+-.+.|+.+..++ +...+|.+++|++.
T Consensus        64 ~~I~If~~s-G~lL~~~~w~------~~~lI~mgWs~~eeLI-~v~k~g~v~Vy~~~  112 (829)
T KOG2280|consen   64 PYIRIFNIS-GQLLGRILWK------HGELIGMGWSDDEELI-CVQKDGTVHVYGLL  112 (829)
T ss_pred             eeEEEEecc-ccchHHHHhc------CCCeeeecccCCceEE-EEeccceEEEeecc
Confidence            457777765 7777777665      3578889998877654 55589999999975

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=92.24  E-value=1.7  Score=26.67  Aligned_cols=102  Identities=19%  Similarity=0.148  Sum_probs=66.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +....++-.| ++....++...+.+--.|..+|+....-.+.      ......+.+.||+...++-+.. .|.-.|-++
T Consensus        62 ~ap~dvapap-dG~VWft~qg~gaiGhLdP~tGev~~ypLg~------Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt  133 (353)
T COG4257          62 SAPFDVAPAP-DGAVWFTAQGTGAIGHLDPATGEVETYPLGS------GASPHGIVVGPDGSAWITDTGL-AIGRLDPKT  133 (353)
T ss_pred             CCccccccCC-CCceEEecCccccceecCCCCCceEEEecCC------CCCCceEEECCCCCeeEecCcc-eeEEecCcc
Confidence            3455666677 6677777766677777788777754443444      3467788899998866664433 566667666


Q ss_pred             CeEEE-Ee--ecccccEEEEEECCCCcEEEeee
Q psy17133         85 GKLVH-SM--VAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+..+ .+  ...........|.+.|+..+++.
T Consensus       134 ~evt~f~lp~~~a~~nlet~vfD~~G~lWFt~q  166 (353)
T COG4257         134 LEVTRFPLPLEHADANLETAVFDPWGNLWFTGQ  166 (353)
T ss_pred             cceEEeecccccCCCcccceeeCCCccEEEeec
Confidence            65432 12  22344567788999999887764

>KOG1520|consensus

Probab=92.16  E-value=2  Score=27.33  Aligned_cols=106  Identities=17%  Similarity=0.158  Sum_probs=51.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE------------
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA------------   71 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------   71 (116)
                      .|++..++|.. .+.-++.+..---+..-+...+. ...+.....+. .-.-.+.+.+++++.+..+-            
T Consensus       114 CGRPLGl~f~~-~ggdL~VaDAYlGL~~V~p~g~~-a~~l~~~~~G~-~~kf~N~ldI~~~g~vyFTDSSsk~~~rd~~~  190 (376)
T KOG1520|consen  114 CGRPLGIRFDK-KGGDLYVADAYLGLLKVGPEGGL-AELLADEAEGK-PFKFLNDLDIDPEGVVYFTDSSSKYDRRDFVF  190 (376)
T ss_pred             cCCcceEEecc-CCCeEEEEecceeeEEECCCCCc-ceeccccccCe-eeeecCceeEcCCCeEEEeccccccchhheEE
Confidence            47889999998 44345544433333444444332 22222111100 00112344455544433332            


Q ss_pred             -----eCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         72 -----HDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        72 -----~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                           ..+|.+.-||..+..... +...-.....++.+||+.+++.+
T Consensus       191 a~l~g~~~GRl~~YD~~tK~~~V-Lld~L~F~NGlaLS~d~sfvl~~  236 (376)
T KOG1520|consen  191 AALEGDPTGRLFRYDPSTKVTKV-LLDGLYFPNGLALSPDGSFVLVA  236 (376)
T ss_pred             eeecCCCccceEEecCcccchhh-hhhcccccccccCCCCCCEEEEE
Confidence                 234666667765443322 22223345678889999887653

>PRK13684 Ycf48-like protein; Provisional

Probab=91.92  E-value=2  Score=26.82  Aligned_cols=101  Identities=12%  Similarity=0.007  Sum_probs=54.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+.++.+.| ++..++++. .+.+..-.-..++.-.......     ...+..+.+.++++.++.+ ..+.+++=....
T Consensus       173 g~~~~i~~~~-~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~-----~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~  244 (334)
T PRK13684        173 GVVRNLRRSP-DGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNS-----SRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDD  244 (334)
T ss_pred             ceEEEEEECC-CCeEEEEeC-CceEEEEcCCCCCeEEEeeCCC-----cccceeeeEcCCCCEEEEe-cCCEEEEccCCC
Confidence            4567788888 555555544 4544432112222222222211     3568899999998877665 456665322344


Q ss_pred             CeEEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSMVA----HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++.-.....    ....+..+.+.|++..++.+
T Consensus       245 G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G  277 (334)
T PRK13684        245 LESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG  277 (334)
T ss_pred             CCccccccCCccccccceeeEEEcCCCCEEEEc
Confidence            433222111    12346778888887766654

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=91.88  E-value=2.9  Score=28.64  Aligned_cols=60  Identities=17%  Similarity=0.212  Sum_probs=40.6

Q ss_pred             ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee-cccccEEEEEEC--CCCcEEEeee
Q psy17133         55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV-AHLDAVTSLAVD--PQGLYILSGT  114 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~s  114 (116)
                      .+.-+.-+.-++..+.-+....+.|||.+.+.....-. ...+.|.++.|.  |+++.+++.|
T Consensus        31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVG   93 (631)
T PF12234_consen   31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVG   93 (631)
T ss_pred             CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEE
Confidence            34455555556666666667789999999887654432 346688999884  6888776654

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG4499|consensus

Probab=91.85  E-value=1.7  Score=25.99  Aligned_cols=47  Identities=19%  Similarity=0.214  Sum_probs=38.4

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP   63 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   63 (116)
                      ++... +|+..++....++|...|..+|+.+.+++-.      ...+++.+|--
T Consensus       217 m~ID~-eG~L~Va~~ng~~V~~~dp~tGK~L~eiklP------t~qitsccFgG  263 (310)
T KOG4499|consen  217 MTIDT-EGNLYVATFNGGTVQKVDPTTGKILLEIKLP------TPQITSCCFGG  263 (310)
T ss_pred             ceEcc-CCcEEEEEecCcEEEEECCCCCcEEEEEEcC------CCceEEEEecC
Confidence            34444 6788888888999999999999999999877      56899999973

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=91.63  E-value=1.7  Score=25.41  Aligned_cols=56  Identities=14%  Similarity=0.256  Sum_probs=40.7

Q ss_pred             cEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---C---eEEEE
Q psy17133         18 TKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---R---HIRFF   80 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~---~i~~~   80 (116)
                      +.|+.+.....|.+|++.  ..+.+..|..-       +.+..+.++..|.++++.-.+   .   .+++|
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-------~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y   92 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-------GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY   92 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch-------hheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence            556555667789999987  34566677655       578999999999999986543   2   56665

>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins

Probab=91.17  E-value=0.45  Score=17.88  Aligned_cols=25  Identities=8%  Similarity=0.214  Sum_probs=15.7

Q ss_pred             eeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133         56 INRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus        56 i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      ..+++++++|.++++-...+.|.++
T Consensus         4 P~gvav~~~g~i~VaD~~n~rV~vf   28 (28)
T PF01436_consen    4 PHGVAVDSDGNIYVADSGNHRVQVF   28 (28)
T ss_dssp             EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred             CcEEEEeCCCCEEEEECCCCEEEEC
Confidence            4566777777666666666666543

For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=90.86  E-value=1.2  Score=22.17  Aligned_cols=48  Identities=19%  Similarity=0.122  Sum_probs=31.0

Q ss_pred             CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCCCeEEE
Q psy17133         25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDDRHIRF   79 (116)
Q Consensus        25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d~~i~~   79 (116)
                      .+|.+..||..+++....+.+-       ...+.+++++|+..++.+ .....|.-
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L-------~fpNGVals~d~~~vlv~Et~~~Ri~r   83 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGL-------YFPNGVALSPDESFVLVAETGRYRILR   83 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEE-------SSEEEEEE-TTSSEEEEEEGGGTEEEE
T ss_pred             CCcCEEEEECCCCeEEEehhCC-------CccCeEEEcCCCCEEEEEeccCceEEE
Confidence            3578999999988765555544       367999999999865544 33444433

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=90.56  E-value=1.5  Score=22.82  Aligned_cols=65  Identities=15%  Similarity=0.183  Sum_probs=39.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc---CCC-CEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH---PTL-PLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~-~~~~~~~~d~~i~   78 (116)
                      ..+.|..+.-..  ...++.+..+|+|-+|+-.  +.+-..+..       ..+.++.+.   -+| +.++++-.+|.|-
T Consensus        41 e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~~--~RlWRiKSK-------~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   41 ETDKVTSLCSLG--GGRFAYALANGTVGVYDRS--QRLWRIKSK-------NQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             cccceEEEEEcC--CCEEEEEecCCEEEEEeCc--ceeeeeccC-------CCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            356677777665  3788999999999999864  233344433       234454433   233 3566776666653

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=90.42  E-value=2.5  Score=25.26  Aligned_cols=80  Identities=19%  Similarity=0.153  Sum_probs=44.2

Q ss_pred             EEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C--CeEEEEECCC----CeEEE---EeecccccE
Q psy17133         29 CVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D--RHIRFFDNVS----GKLVH---SMVAHLDAV   98 (116)
Q Consensus        29 v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d--~~i~~~~~~~----~~~~~---~~~~~~~~v   98 (116)
                      -.+||+.+++. ..+....     .....+-.+-+||+++.+++. +  ..+++++..+    .....   .+. .....
T Consensus        48 s~~yD~~tn~~-rpl~v~t-----d~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~-~~RWY  120 (243)
T PF07250_consen   48 SVEYDPNTNTF-RPLTVQT-----DTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQ-SGRWY  120 (243)
T ss_pred             EEEEecCCCcE-EeccCCC-----CCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECccccc-CCCcc
Confidence            34788877653 3333221     122334456689999988775 2  4578887543    11111   111 12233


Q ss_pred             EEEEECCCCcEEEeeec
Q psy17133         99 TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        99 ~~~~~~~~~~~l~~~s~  115 (116)
                      -...--|||+.|+.|+.
T Consensus       121 pT~~~L~DG~vlIvGG~  137 (243)
T PF07250_consen  121 PTATTLPDGRVLIVGGS  137 (243)
T ss_pred             ccceECCCCCEEEEeCc
Confidence            34555789999988875

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>KOG1897|consensus

Probab=90.24  E-value=5.5  Score=28.86  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=52.5

Q ss_pred             eEEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          8 TSIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      .+..|..+.+.++++|.          ..|.+.++.....+.+.....+.-    .+.+.++.. -+|+++|.-  ...|
T Consensus       778 ~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v----~Gav~aL~~-fngkllA~I--n~~v  850 (1096)
T KOG1897|consen  778 ISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVV----KGAVYALVE-FNGKLLAGI--NQSV  850 (1096)
T ss_pred             eeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeee----ccceeehhh-hCCeEEEec--CcEE
Confidence            34457653355666654          146677777665333333322211    233444432 357777665  4579


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++|++.+.+.++....+..++..+...-.+..++.|
T Consensus       851 rLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~Vg  886 (1096)
T KOG1897|consen  851 RLYEWTTERELRIECNISNPIIALDLQVKGDEIAVG  886 (1096)
T ss_pred             EEEEccccceehhhhcccCCeEEEEEEecCcEEEEe
Confidence            999988776555544444455555554455544443

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=89.77  E-value=5.8  Score=28.47  Aligned_cols=78  Identities=9%  Similarity=-0.005  Sum_probs=45.0

Q ss_pred             CCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCC-----eEEEEECCCC-eEEEEeeccccc
Q psy17133         26 NSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDR-----HIRFFDNVSG-KLVHSMVAHLDA   97 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~-----~i~~~~~~~~-~~~~~~~~~~~~   97 (116)
                      .+.+.+-|.....+... +..       ...+...+|+|||+.++. .+-++     .|.+-++.+. .-+..+......
T Consensus       328 ~~~L~~~D~dG~n~~~ve~~~-------~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aa  400 (912)
T TIGR02171       328 TGNLAYIDYTKGASRAVEIED-------TISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAA  400 (912)
T ss_pred             CCeEEEEecCCCCceEEEecC-------CCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeeccccc
Confidence            35778888764444332 333       356888999999998876 33333     4777787643 223334333444


Q ss_pred             EEEEEECCCCcEE
Q psy17133         98 VTSLAVDPQGLYI  110 (116)
Q Consensus        98 v~~~~~~~~~~~l  110 (116)
                      |..-...++|...
T Consensus       401 iprwrv~e~gdt~  413 (912)
T TIGR02171       401 IPRWRVLENGDTV  413 (912)
T ss_pred             ccceEecCCCCeE
Confidence            4444445555543

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=89.42  E-value=3.1  Score=24.87  Aligned_cols=104  Identities=13%  Similarity=0.099  Sum_probs=59.0

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEE-CCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---CCCeEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFD-LETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---DDRHIRFF   80 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~-~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~d~~i~~~   80 (116)
                      .+....|++ ++...+....+....++. ..+++. .........    ...|..+.++|||..++...   .++.|.+-
T Consensus        67 ~l~~PS~d~-~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~----~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va  141 (253)
T PF10647_consen   67 SLTRPSWDP-DGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGL----RGRITALRVSPDGTRVAVVVEDGGGGRVYVA  141 (253)
T ss_pred             ccccccccC-CCCEEEEEcCCCceEEEEecCCCcceeEEeccccc----CCceEEEEECCCCcEEEEEEecCCCCeEEEE
Confidence            456677888 556555555555555553 333322 222222210    12799999999998666544   35677766


Q ss_pred             ECC---CC------eEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         81 DNV---SG------KLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~---~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      -+.   .+      ............+..+.|.+++.+++.+.
T Consensus       142 ~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~  184 (253)
T PF10647_consen  142 GVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR  184 (253)
T ss_pred             EEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence            542   23      11111212245788999999988776543

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF01011 PQQ: PQQ enzyme repeat family

Probab=89.38  E-value=0.87  Score=18.39  Aligned_cols=28  Identities=14%  Similarity=0.243  Sum_probs=22.7

Q ss_pred             EEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133         19 KMVTAFDNSACVLFDLETGKPVVRIDSS   46 (116)
Q Consensus        19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~   46 (116)
                      .+..+..++.++-.|..+|+.+-.++..
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~~   29 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQTG   29 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence            3455688999999999999988887654

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>KOG1916|consensus

Probab=89.30  E-value=0.43  Score=33.71  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=45.3

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC-CC----
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV-SG----   85 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~----   85 (116)
                      +..++..+-.++.+++....... +..+..|....     -..+.+.-..++|||..++.++.||.++.|.+. +|    
T Consensus       194 ~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~  272 (1283)
T KOG1916|consen  194 NKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH  272 (1283)
T ss_pred             ccceeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence            34555566667777776654221 12223332100     001222234479999999999999999999864 23    


Q ss_pred             eEEEEeecccc
Q psy17133         86 KLVHSMVAHLD   96 (116)
Q Consensus        86 ~~~~~~~~~~~   96 (116)
                      +++..++.|.+
T Consensus       273 rclhewkphd~  283 (1283)
T KOG1916|consen  273 RCLHEWKPHDK  283 (1283)
T ss_pred             hhhhccCCCCC
Confidence            34445555553

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=89.17  E-value=2.6  Score=23.59  Aligned_cols=29  Identities=7%  Similarity=0.118  Sum_probs=24.2

Q ss_pred             ceeEEEEcCCC------CEEEEEeCCCeEEEEECC
Q psy17133         55 GINRVVCHPTL------PLTITAHDDRHIRFFDNV   83 (116)
Q Consensus        55 ~i~~~~~~~~~------~~~~~~~~d~~i~~~~~~   83 (116)
                      .+..++|+|.|      .+|++...++.|.+|...
T Consensus        87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~  121 (173)
T PF12657_consen   87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPP  121 (173)
T ss_pred             cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecC
Confidence            68899999832      378889999999999866

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function

Probab=89.00  E-value=5.2  Score=26.87  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=20.1

Q ss_pred             CCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133         84 SGKLVHSMV-AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        84 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +++..+-+. .....+..++|+||++.|+..
T Consensus       489 ~g~~~rf~~~P~gaE~tG~~fspDg~tlFvn  519 (524)
T PF05787_consen  489 TGELKRFLVGPNGAEITGPCFSPDGRTLFVN  519 (524)
T ss_pred             ccceeeeccCCCCcccccceECCCCCEEEEE
Confidence            344433333 245689999999999988753

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=88.78  E-value=4.2  Score=25.53  Aligned_cols=98  Identities=19%  Similarity=0.205  Sum_probs=52.5

Q ss_pred             EEEEc-cCCCcEEEEeeCCCe--EEEEECCCCceeEEEecCCcCcCCCCcee-EEEEcCCCCEE-EEEeCC----CeEEE
Q psy17133          9 SIDFV-RDESTKMVTAFDNSA--CVLFDLETGKPVVRIDSSQFGVSGGGGIN-RVVCHPTLPLT-ITAHDD----RHIRF   79 (116)
Q Consensus         9 ~~~~~-~~~~~~l~~~~~~~~--v~i~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~-~~~~~d----~~i~~   79 (116)
                      ...|. +++..++.....+|.  |++++...+. ...+...      .-.|. -+.+++++..+ +++..+    ..+..
T Consensus       239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G------~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~  311 (353)
T PF00930_consen  239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSG------DWEVTSILGWDEDNNRIYFTANGDNPGERHLYR  311 (353)
T ss_dssp             EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-S------SS-EEEEEEEECTSSEEEEEESSGGTTSBEEEE
T ss_pred             ccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccC------ceeecccceEcCCCCEEEEEecCCCCCceEEEE
Confidence            44444 545455555556655  4555655444 3344333      24564 47778886654 455542    35666


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .++..+..+..+......-..+.|+|++++++-.
T Consensus       312 v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  312 VSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             EETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             EEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence            6676233344454333323689999999998744

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG3616|consensus

Probab=88.44  E-value=1.9  Score=30.32  Aligned_cols=66  Identities=17%  Similarity=0.194  Sum_probs=40.1

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .++++.-+| .++.++.++.|+.+.+|+.....+........       +..-+.|...  -+++...|..+.-|.
T Consensus        16 ~~~aiqshp-~~~s~v~~~~d~si~lfn~~~r~qski~~~~~-------p~~nlv~tnh--gl~~~tsdrr~la~~   81 (1636)
T KOG3616|consen   16 FTTAIQSHP-GGQSFVLAHQDGSIILFNFIPRRQSKICEEAK-------PKENLVFTNH--GLVTATSDRRALAWK   81 (1636)
T ss_pred             eeeeeeecC-CCceEEEEecCCcEEEEeecccchhhhhhhcC-------Cccceeeecc--ceEEEeccchhheee
Confidence            456777778 88999999999999999987554422222221       1112223222  355555566666665

>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides

Probab=87.99  E-value=2.1  Score=21.13  Aligned_cols=30  Identities=13%  Similarity=0.101  Sum_probs=22.9

Q ss_pred             CceeEEEEcCCCCEEEEEe-CCCeEEEEECC
Q psy17133         54 GGINRVVCHPTLPLTITAH-DDRHIRFFDNV   83 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~   83 (116)
                      ...+.|.++|+++.++.++ ..+.|.++..+
T Consensus        54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~   84 (86)
T PF01731_consen   54 SFANGIAISPDKKYLYVASSLAHSIHVYKRH   84 (86)
T ss_pred             CCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence            3568999999988776654 46889888764

The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity

>PHA02713 hypothetical protein; Provisional

Probab=87.64  E-value=6.7  Score=26.52  Aligned_cols=23  Identities=13%  Similarity=0.135  Sum_probs=13.2

Q ss_pred             CCcEEEEeeCC-----CeEEEEECCCCc
Q psy17133         16 ESTKMVTAFDN-----SACVLFDLETGK   38 (116)
Q Consensus        16 ~~~~l~~~~~~-----~~v~i~~~~~~~   38 (116)
                      ++...+.|+.+     ..+..||..+.+
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~  378 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDK  378 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCe
Confidence            34555555543     247778877554

>PHA02713 hypothetical protein; Provisional

Probab=87.25  E-value=7.1  Score=26.40  Aligned_cols=24  Identities=4%  Similarity=-0.014  Sum_probs=14.5

Q ss_pred             CCCEEEEEeCC------CeEEEEECCC-CeE
Q psy17133         64 TLPLTITAHDD------RHIRFFDNVS-GKL   87 (116)
Q Consensus        64 ~~~~~~~~~~d------~~i~~~~~~~-~~~   87 (116)
                      ++++.+.|+.+      ..+..||.++ .+-
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W  493 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGW  493 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCe
Confidence            46666666543      2467788886 443

>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12

Probab=87.17  E-value=5  Score=24.59  Aligned_cols=66  Identities=17%  Similarity=0.128  Sum_probs=42.6

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-----CEEEEE-eCCCeEEEEECCCCeEEEEee
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-----PLTITA-HDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~-~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      .++.+||+.+++.++.+.-........+.+..+.+....     .+++.. ....-|.++|+.+++..+.+.
T Consensus        34 pKLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~  105 (287)
T PF03022_consen   34 PKLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLH  105 (287)
T ss_dssp             -EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEET
T ss_pred             cEEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEec
Confidence            478999999999888876543332335667888887632     233333 334689999999987665543

5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=87.17  E-value=6.5  Score=25.85  Aligned_cols=85  Identities=15%  Similarity=0.133  Sum_probs=40.9

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC--CCE-EEEEeCCCeEEEEE-CCCCeE----EEEeecc----
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPL-TITAHDDRHIRFFD-NVSGKL----VHSMVAH----   94 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~-~~~~~~d~~i~~~~-~~~~~~----~~~~~~~----   94 (116)
                      .++++||+.+.+.++++.....    ......++|..+  ... ++.+.-...|..|- .+.++-    +-.+...    
T Consensus       222 ~~l~vWD~~~r~~~Q~idLg~~----g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~  297 (461)
T PF05694_consen  222 HSLHVWDWSTRKLLQTIDLGEE----GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG  297 (461)
T ss_dssp             -EEEEEETTTTEEEEEEES-TT----EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred             CeEEEEECCCCcEeeEEecCCC----CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence            6799999999999988875421    123567777654  333 23333344455443 233431    1111110    


Q ss_pred             -------------cccEEEEEECCCCcEEEeeec
Q psy17133         95 -------------LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        95 -------------~~~v~~~~~~~~~~~l~~~s~  115 (116)
                                   ..-++.|..|-|.++|...++
T Consensus       298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W  331 (461)
T PF05694_consen  298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNW  331 (461)
T ss_dssp             S---GGGGGG-EE------EEE-TTS-EEEEEET
T ss_pred             ccccccccccccCCCceEeEEEccCCCEEEEEcc
Confidence                         235789999999999987654

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=87.12  E-value=5.4  Score=24.86  Aligned_cols=107  Identities=18%  Similarity=0.299  Sum_probs=60.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCe------EEEEECCC--C--ceeE-----EEecCCcC--cCCCCceeEEEEcCCCCE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSA------CVLFDLET--G--KPVV-----RIDSSQFG--VSGGGGINRVVCHPTLPL   67 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~------v~i~~~~~--~--~~~~-----~~~~~~~~--~~~~~~i~~~~~~~~~~~   67 (116)
                      +...++.+.+ ++..+++-++++.      ++.+.+..  +  ..+.     .+......  ....-...++++.+++.+
T Consensus        20 GGlSgl~~~~-~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~   98 (326)
T PF13449_consen   20 GGLSGLDYDP-DDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF   98 (326)
T ss_pred             CcEeeEEEeC-CCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence            5567889987 3445555565655      55555432  1  1111     11111000  000113457888778888


Q ss_pred             EEEEeCC------CeEEEEECCCCeEEEEee---------------cccccEEEEEECCCCcEEEee
Q psy17133         68 TITAHDD------RHIRFFDNVSGKLVHSMV---------------AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        68 ~~~~~~d------~~i~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +++.-.+      ..|..++.. |+....+.               ......-+++++|+|+.|+++
T Consensus        99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~  164 (326)
T PF13449_consen   99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAA  164 (326)
T ss_pred             EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEE
Confidence            8877667      788888866 65544331               123467899999999966654

>KOG3630|consensus

Probab=87.04  E-value=8  Score=28.73  Aligned_cols=63  Identities=10%  Similarity=0.085  Sum_probs=42.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      ....++++|+| .|..++.|..+|.+.=|-.. .+....+.+...  .....|.+++|-....+++.
T Consensus       198 t~~~Tav~WSp-rGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~--~e~yrvl~v~Wl~t~eflvv  260 (1405)
T KOG3630|consen  198 TNSQTAVLWSP-RGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPV--EENYRVLSVTWLSTQEFLVV  260 (1405)
T ss_pred             ccceeeEEecc-ccceeeEecCCCeEEEeecc-cceeecccCCCc--CCCcceeEEEEecceeEEEE
Confidence            34578999999 89999999999988877654 443333332211  11357899999877666654

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=87.03  E-value=1.1  Score=16.90  Aligned_cols=26  Identities=12%  Similarity=0.008  Sum_probs=19.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFD   33 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~   33 (116)
                      ..|.+++..+   .+++++...+.+++|.
T Consensus         2 E~i~aia~g~---~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGD---SWVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccC---CEEEEEeCCCeEEecC
Confidence            3567777655   6888888888888873

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.71  E-value=5.6  Score=24.66  Aligned_cols=40  Identities=8%  Similarity=0.138  Sum_probs=31.5

Q ss_pred             CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         53 GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        53 ~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ...+.++.|+|+.+.+++..+...-.++=..+|..++.+.
T Consensus        85 ~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiP  124 (316)
T COG3204          85 TANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIP  124 (316)
T ss_pred             cccccceeeCCCcceEEEecCCCceEEEEecCCceEEEec
Confidence            3458999999999988888777777777667788877764

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=86.53  E-value=9.1  Score=26.88  Aligned_cols=84  Identities=11%  Similarity=0.147  Sum_probs=53.0

Q ss_pred             CCcEEEEeeCCCeEEEEECCC-------C----c---------eeEEEecCCcCcCCCCceeEEEEc--CCCCEEEEEeC
Q psy17133         16 ESTKMVTAFDNSACVLFDLET-------G----K---------PVVRIDSSQFGVSGGGGINRVVCH--PTLPLTITAHD   73 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~-------~----~---------~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~   73 (116)
                      +...|+.+.++|.|.+|..++       .    .         +-..+..       ...+++++++  ...+++|.+++
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-------~~SaWGLdIh~~~~~rlIAVSsN  185 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-------GASAWGLDIHDYKKSRLIAVSSN  185 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-------CCceeEEEEEecCcceEEEEecC
Confidence            457888899999999997631       0    0         1111111       2468899998  77889999998


Q ss_pred             CCeEEEEECCCC--eEE-EEeecccccEEEEEECCC
Q psy17133         74 DRHIRFFDNVSG--KLV-HSMVAHLDAVTSLAVDPQ  106 (116)
Q Consensus        74 d~~i~~~~~~~~--~~~-~~~~~~~~~v~~~~~~~~  106 (116)
                      ...|.+|-....  +.. ..-..+..-|.+++|-++
T Consensus       186 s~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~  221 (717)
T PF08728_consen  186 SQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDD  221 (717)
T ss_pred             CceEEEEEEeccccccccccccccccCCCeeEeecC
Confidence            888888765431  111 111124456778888654

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=85.73  E-value=8.2  Score=25.60  Aligned_cols=68  Identities=21%  Similarity=0.114  Sum_probs=41.4

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCC--CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSG--GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA   93 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~   93 (116)
                      ++.+.-.|..+++.+-+..........  ......-.....+..++.++.|+.++.+|.++|+.+.....
T Consensus       365 ~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~  434 (488)
T cd00216         365 KGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT  434 (488)
T ss_pred             ceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence            567888888888876665432100000  00110001112456788888999999999999998877653

The alignment model contains an 8-bladed beta-propeller.

>PHA03098 kelch-like protein; Provisional

Probab=85.09  E-value=9  Score=25.55  Aligned_cols=24  Identities=8%  Similarity=0.102  Sum_probs=14.4

Q ss_pred             CCCEEEEEeCC--------CeEEEEECCCCeE
Q psy17133         64 TLPLTITAHDD--------RHIRFFDNVSGKL   87 (116)
Q Consensus        64 ~~~~~~~~~~d--------~~i~~~~~~~~~~   87 (116)
                      ++++.+.|+.+        ..+.+||..+.+-
T Consensus       437 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W  468 (534)
T PHA03098        437 DGKIYVIGGISYIDNIKVYNIVESYNPVTNKW  468 (534)
T ss_pred             CCEEEEECCccCCCCCcccceEEEecCCCCce
Confidence            45555555532        2378888876654

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=84.92  E-value=6.3  Score=23.57  Aligned_cols=103  Identities=16%  Similarity=0.140  Sum_probs=53.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe---cCC-----cCcCCCCceeEEE--EcCCC-CEEEEEeC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID---SSQ-----FGVSGGGGINRVV--CHPTL-PLTITAHD   73 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~-----~~~~~~~~i~~~~--~~~~~-~~~~~~~~   73 (116)
                      ..|..+...| +-+.+++-+ |+.++++++..-.......   ...     ........+...+  -.+.+ ..++.+ .
T Consensus        36 ~~I~ql~vl~-~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~  112 (275)
T PF00780_consen   36 SSITQLSVLP-ELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-V  112 (275)
T ss_pred             ceEEEEEEec-ccCEEEEEc-CCccEEEEchhhccccccccccccccccccccccccCCeeEEeeccccccceEEEEE-E
Confidence            3477788888 556665555 4899999987543322110   000     0000022344444  12333 344444 4


Q ss_pred             CCeEEEEECCCC-----eEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         74 DRHIRFFDNVSG-----KLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 d~~i~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ...|.+|.....     +..+.+. -...+..++|.+  +.++.+
T Consensus       113 kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~~i~v~  154 (275)
T PF00780_consen  113 KKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--NKICVG  154 (275)
T ss_pred             CCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--CEEEEE
Confidence            558888876542     3444444 345678888873  344443

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG4441|consensus

Probab=83.78  E-value=11  Score=25.65  Aligned_cols=63  Identities=14%  Similarity=0.035  Sum_probs=35.2

Q ss_pred             CcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-cCCCCEEEEEeCCC-----eEEEEECCC
Q psy17133         17 STKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-HPTLPLTITAHDDR-----HIRFFDNVS   84 (116)
Q Consensus        17 ~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~d~-----~i~~~~~~~   84 (116)
                      +...++|+.+      ..+..||..+++... +..-      ...-..... .-+|.+.+.|+.|+     .+-.||..+
T Consensus       333 ~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~-~a~M------~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~  405 (571)
T KOG4441|consen  333 GKLYVVGGYDSGSDRLSSVERYDPRTNQWTP-VAPM------NTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVT  405 (571)
T ss_pred             CEEEEEccccCCCcccceEEEecCCCCceec-cCCc------cCccccceeEEECCEEEEEeccccccccccEEEecCCC
Confidence            3666777766      346788887665332 2111      011111212 23577788888775     377788765


Q ss_pred             Ce
Q psy17133         85 GK   86 (116)
Q Consensus        85 ~~   86 (116)
                      .+
T Consensus       406 ~~  407 (571)
T KOG4441|consen  406 NK  407 (571)
T ss_pred             Cc
Confidence            43

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=83.43  E-value=5.4  Score=21.63  Aligned_cols=84  Identities=7%  Similarity=0.037  Sum_probs=48.0

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCC--------ceeEEEecCCcCcCCCCceeEEEEcC---C-CC-EEEEEeCCCe
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETG--------KPVVRIDSSQFGVSGGGGINRVVCHP---T-LP-LTITAHDDRH   76 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~---~-~~-~~~~~~~d~~   76 (116)
                      -.|.. ....|+.+...++|.+.+....        ..+..+.-.       ..|++++-.+   + ++ .|+.+ ....
T Consensus         4 GkfDG-~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin-------~~italaaG~l~~~~~~D~LliG-t~t~   74 (136)
T PF14781_consen    4 GKFDG-VHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNIN-------QEITALAAGRLKPDDGRDCLLIG-TQTS   74 (136)
T ss_pred             EEeCC-CceeEEEEecCCEEEEECCCccccccccccCceeEEECC-------CceEEEEEEecCCCCCcCEEEEe-ccce
Confidence            35655 4567788888899999986532        223344333       3466664433   2 33 44444 4678


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEE
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAV  103 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~  103 (116)
                      +..||++...-+.... -...+.++.+
T Consensus        75 llaYDV~~N~d~Fyke-~~DGvn~i~~  100 (136)
T PF14781_consen   75 LLAYDVENNSDLFYKE-VPDGVNAIVI  100 (136)
T ss_pred             EEEEEcccCchhhhhh-CccceeEEEE
Confidence            9999988655443222 2234555555

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=83.06  E-value=4.9  Score=24.65  Aligned_cols=41  Identities=12%  Similarity=0.135  Sum_probs=28.2

Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ...|++||..+.+-...-..-.+.|+.+.|..+.+.++.|.
T Consensus        15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~   55 (281)
T PF12768_consen   15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGN   55 (281)
T ss_pred             CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEe
Confidence            34688899887766555545567888888886666666553

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=82.87  E-value=9.3  Score=23.97  Aligned_cols=76  Identities=21%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC------CCCEEEEEeCCCeEEEEECCCCeEEEEeeccc---
Q psy17133         25 DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP------TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL---   95 (116)
Q Consensus        25 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~---   95 (116)
                      ..+.|-+||.. ++.++++.....    -...+.++..|      .+.+|+---.||+|..+|..+++.+..+....   
T Consensus       220 G~G~VdvFd~~-G~l~~r~as~g~----LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~p  294 (336)
T TIGR03118       220 GLGYVNVFTLN-GQLLRRVASSGR----LNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHP  294 (336)
T ss_pred             CcceEEEEcCC-CcEEEEeccCCc----ccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCe
Confidence            34678899976 777877743311    34567777765      45677766679999999999998887776432   


Q ss_pred             ---ccEEEEEECC
Q psy17133         96 ---DAVTSLAVDP  105 (116)
Q Consensus        96 ---~~v~~~~~~~  105 (116)
                         ..++.+.|-.
T Consensus       295 i~i~GLWgL~fGn  307 (336)
T TIGR03118       295 VKVDGLWSLTFGN  307 (336)
T ss_pred             EEecCeEEeeeCC
Confidence               2457777744

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=82.41  E-value=15  Score=25.94  Aligned_cols=73  Identities=10%  Similarity=0.099  Sum_probs=45.5

Q ss_pred             CCceEEEEc--cCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCC---C---EEEEEeCCC
Q psy17133          5 GTPTSIDFV--RDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTL---P---LTITAHDDR   75 (116)
Q Consensus         5 ~~v~~~~~~--~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~---~---~~~~~~~d~   75 (116)
                      ..++++++.  . ..++|++++....|.+|-........ .-+.+    .+...|.+++|-++.   .   ++++++-.|
T Consensus       164 ~SaWGLdIh~~~-~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~----~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G  238 (717)
T PF08728_consen  164 ASAWGLDIHDYK-KSRLIAVSSNSQEVTVFAFALVDERFYHVPSH----QHSHNIPNVSFLDDDLDPNGHVKVVATDISG  238 (717)
T ss_pred             CceeEEEEEecC-cceEEEEecCCceEEEEEEecccccccccccc----ccccCCCeeEeecCCCCCccceEEEEEeccC
Confidence            456778887  5 56788888877888877654211111 10011    113458888887643   2   677788889


Q ss_pred             eEEEEEC
Q psy17133         76 HIRFFDN   82 (116)
Q Consensus        76 ~i~~~~~   82 (116)
                      .+.+|++
T Consensus       239 ~v~~~~I  245 (717)
T PF08728_consen  239 EVWTFKI  245 (717)
T ss_pred             cEEEEEE
Confidence            9888887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=82.20  E-value=15  Score=26.01  Aligned_cols=74  Identities=18%  Similarity=0.125  Sum_probs=48.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE----ecCCc-------Cc--CCCCceeEEEEcCCCCEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI----DSSQF-------GV--SGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~----~~~~~-------~~--~~~~~i~~~~~~~~~~~~~~   70 (116)
                      .+.|.++.... -+..++....||.|.++|..+.+.+...    .....       +.  ..-....-++++|++..++.
T Consensus       259 ~~~V~si~~~~-~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~  337 (753)
T PF11635_consen  259 NKRVVSITSPE-LDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQ  337 (753)
T ss_pred             CCeEEEEEecc-cCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEE
Confidence            46677777655 5578888899999999999887665544    11100       00  00112334779999888888


Q ss_pred             EeCCCeEE
Q psy17133         71 AHDDRHIR   78 (116)
Q Consensus        71 ~~~d~~i~   78 (116)
                      ...++.+.
T Consensus       338 ~~~~~~~~  345 (753)
T PF11635_consen  338 IDEDGKTK  345 (753)
T ss_pred             EecCCCce
Confidence            87777755

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=82.18  E-value=16  Score=26.08  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=44.6

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcC-----cC-CCCceeEEEEcC--CCCEEEEEeC----------CCeEEE
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-----VS-GGGGINRVVCHP--TLPLTITAHD----------DRHIRF   79 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-----~~-~~~~i~~~~~~~--~~~~~~~~~~----------d~~i~~   79 (116)
                      ..++.++.|+.+.-.|..+|+....+......     .. .......+.-.|  .+..++.++.          ++.|+-
T Consensus       261 ~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A  340 (764)
T TIGR03074       261 RRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRA  340 (764)
T ss_pred             CEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEE
Confidence            47778888999999999999988766432100     00 000000111122  1234444432          588999


Q ss_pred             EECCCCeEEEEee
Q psy17133         80 FDNVSGKLVHSMV   92 (116)
Q Consensus        80 ~~~~~~~~~~~~~   92 (116)
                      +|.++|+.+-.+.
T Consensus       341 ~Da~TGkl~W~~~  353 (764)
T TIGR03074       341 FDVNTGALVWAWD  353 (764)
T ss_pred             EECCCCcEeeEEe
Confidence            9999999887764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)

Probab=81.88  E-value=9.9  Score=23.56  Aligned_cols=39  Identities=21%  Similarity=0.265  Sum_probs=30.8

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS   46 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~   46 (116)
                      +.++...+ ++++|+++-.-..|.+.+..+++.+-.+.+.
T Consensus       146 iNsV~~~~-~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~  184 (299)
T PF14269_consen  146 INSVDKDD-DGDYLISSRNTSTIYKIDPSTGKIIWRLGGK  184 (299)
T ss_pred             eeeeeecC-CccEEEEecccCEEEEEECCCCcEEEEeCCC
Confidence            45566666 6789998888888999998889888887655

>TIGR02608 delta_60_rpt delta-60 repeat domain

Probab=81.75  E-value=3.6  Score=18.45  Aligned_cols=18  Identities=22%  Similarity=0.422  Sum_probs=13.7

Q ss_pred             cEEEEEECCCCcEEEeee
Q psy17133         97 AVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s  114 (116)
                      ...+++..|||++++.+.
T Consensus         2 ~~~~~~~q~DGkIlv~G~   19 (55)
T TIGR02608         2 RAYAVAVQSDGKILVAGY   19 (55)
T ss_pred             ceEEEEECCCCcEEEEEE
Confidence            356778888999888774

This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=81.68  E-value=12  Score=24.33  Aligned_cols=59  Identities=7%  Similarity=-0.068  Sum_probs=35.5

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe-----EEEEeec--ccccEEEEEECCCCcEEEeee
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK-----LVHSMVA--HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~-----~~~~~~~--~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..+..+.+.+++.+++.+ ..+.+.. ....++     .......  ....+..+.|.+++..+++|.
T Consensus       281 ~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~  346 (398)
T PLN00033        281 RRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGG  346 (398)
T ss_pred             cceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEEC
Confidence            468889999998877665 4455443 333343     1222221  123478888988888777653

>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A

Probab=81.57  E-value=2.8  Score=16.98  Aligned_cols=20  Identities=10%  Similarity=0.125  Sum_probs=14.1

Q ss_pred             CcEEEEeeCCCeEEEEECCC
Q psy17133         17 STKMVTAFDNSACVLFDLET   36 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~   36 (116)
                      +..++.++.++.++.+|.++
T Consensus        21 ~g~vyv~~~dg~l~ald~~t   40 (40)
T PF13570_consen   21 GGRVYVGTGDGNLYALDAAT   40 (40)
T ss_dssp             TSEEEEE-TTSEEEEEETT-
T ss_pred             CCEEEEEcCCCEEEEEeCCC
Confidence            35777788889999888753

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=81.12  E-value=10  Score=23.16  Aligned_cols=88  Identities=14%  Similarity=0.016  Sum_probs=52.1

Q ss_pred             eEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          8 TSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      ..+.|.. ++.++-+.+..|  .++.+|+.+++.+....-..     .-.-..+....+ ++.--.=.++...+||..+-
T Consensus        48 QGL~~~~-~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~-----~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl  120 (264)
T PF05096_consen   48 QGLEFLD-DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPP-----RYFGEGITILGD-KLYQLTWKEGTGFVYDPNTL  120 (264)
T ss_dssp             EEEEEEE-TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TT-----T--EEEEEEETT-EEEEEESSSSEEEEEETTTT
T ss_pred             ccEEecC-CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCc-----cccceeEEEECC-EEEEEEecCCeEEEEccccc
Confidence            4566755 556666666544  68999999998776655431     112233444332 23333335789999999988


Q ss_pred             eEEEEeecccccEEEEEE
Q psy17133         86 KLVHSMVAHLDAVTSLAV  103 (116)
Q Consensus        86 ~~~~~~~~~~~~v~~~~~  103 (116)
                      +.+..+.- .+.-..++.
T Consensus       121 ~~~~~~~y-~~EGWGLt~  137 (264)
T PF05096_consen  121 KKIGTFPY-PGEGWGLTS  137 (264)
T ss_dssp             EEEEEEE--SSS--EEEE
T ss_pred             eEEEEEec-CCcceEEEc
Confidence            88887752 345566663

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>KOG3616|consensus

Probab=81.03  E-value=5.8  Score=28.22  Aligned_cols=34  Identities=21%  Similarity=0.261  Sum_probs=27.9

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      ..++++.-+|.+..++.+..|+.|.+|+....+.
T Consensus        15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~q   48 (1636)
T KOG3616|consen   15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQ   48 (1636)
T ss_pred             ceeeeeeecCCCceEEEEecCCcEEEEeecccch
Confidence            3567888889999999999999999999765443

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=80.74  E-value=15  Score=24.84  Aligned_cols=68  Identities=21%  Similarity=0.131  Sum_probs=45.0

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCcee----------EEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGIN----------RVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~----------~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      ..+++++.++.|+-+|..+|+.+-++.....     ..+.          .+.+  .+..++.++.++.+.-.|.++|+.
T Consensus        70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~-----~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~  142 (527)
T TIGR03075        70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLP-----DDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKV  142 (527)
T ss_pred             CEEEEECCCCcEEEEECCCCceeeEecCCCC-----cccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCE
Confidence            4566666778899999999988877654311     0111          1111  234566677889999999999988


Q ss_pred             EEEee
Q psy17133         88 VHSMV   92 (116)
Q Consensus        88 ~~~~~   92 (116)
                      +....
T Consensus       143 ~W~~~  147 (527)
T TIGR03075       143 VWSKK  147 (527)
T ss_pred             Eeecc
Confidence            76543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=80.12  E-value=11  Score=27.21  Aligned_cols=59  Identities=14%  Similarity=0.092  Sum_probs=38.8

Q ss_pred             CCCCceEEEEccCCCcEEEE-ee-C----CCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVT-AF-D----NSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT   68 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~-~~-~----~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   68 (116)
                      ....+..-.|+| +++.++. .+ +    ...|++-++.+ +..+.+++..      ...|....+..+|..+
T Consensus       348 ~~~~i~sP~~SP-DG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve------~aaiprwrv~e~gdt~  413 (912)
T TIGR02171       348 DTISVYHPDISP-DGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVE------NAAIPRWRVLENGDTV  413 (912)
T ss_pred             CCCceecCcCCC-CCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecc------cccccceEecCCCCeE
Confidence            345677889999 7888877 22 2    23488888874 4445566655      4567777777777643

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	116
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-04
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-04
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-04
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		5e-04
2h9l_A	329	Wdr5delta23 Length = 329		5e-04
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		5e-04
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-04
2gnq_A	336	Structure Of Wdr5 Length = 336		5e-04
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		5e-04
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		5e-04
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-04
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		5e-04
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		5e-04
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		5e-04
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		5e-04
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-04
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		5e-04

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 10  IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI 69
           IDF   E   + T + +    L++ ET   V  I  ++  V  G  I R          I
Sbjct: 19  IDFHPTEPWVLTTLY-SGRVELWNYETQVEVRSIQVTETPVRAGKFIAR------KNWII 71
Query: 70  TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
              DD  IR F+  +G+ V    AH D + S+AV P   Y+LSG+
Sbjct: 72  VGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS 116

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 10  IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI 69
           IDF   E   + T + +    L++ ET   V  I  ++  V  G  I R          I
Sbjct: 19  IDFHPTEPWVLTTLY-SGRVELWNYETQVEVRSIQVTETPVRAGKFIAR------KNWII 71
Query: 70  TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
              DD  IR F+  +G+ V    AH D + S+AV P   Y+LSG+
Sbjct: 72  VGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS 116

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 129
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 130 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 172

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 132
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 175

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 93  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 143
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 144 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 186

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 129
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 130 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 172

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 129
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 130 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 172

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 100 DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 150
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 151 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 193

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 81  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 131
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 132 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 174

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 77  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 127
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 128 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 170

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 132
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 175

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 82  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 132
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 175

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 75  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 125
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 126 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 168

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 76  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 126
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 98  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 148
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 191

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 72  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 122
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 123 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 165

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 16  ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC---HPTLPLTITAH 72
           +S  +V+A D+    ++D+ +GK +  +          G  N V C   +P   L ++  
Sbjct: 76  DSNLLVSASDDKTLKIWDVSSGKCLKTLK---------GHSNYVFCCNFNPQSNLIVSGS 126
Query: 73  DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            D  +R +D  +GK + ++ AH D V+++  +  G  I+S +Y
Sbjct: 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	116
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.95
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.94
3ow8_A	321	WD repeat-containing protein 61; structural genomi	99.94
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.93
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.93
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.93
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.93
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.93
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	99.93
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.92
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.92
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.92
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.92
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	99.92
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	99.92
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	99.92
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	99.92
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.92
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.92
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.92
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	99.92
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.91
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	99.91
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.91
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	99.91
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.91
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.91
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	99.91
2pm7_B	297	Protein transport protein SEC13, protein transport	99.91
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	99.91
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.9
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.9
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.9
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.9
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.9
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.9
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	99.89
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	99.89
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	99.89
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.89
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	99.89
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	99.89
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.89
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.89
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.88
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.88
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.88
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.88
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.88
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.88
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.88
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	99.88
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.88
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.88
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.88
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	99.88
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.88
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.88
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.88
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	99.88
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	99.87
2pm7_B	297	Protein transport protein SEC13, protein transport	99.87
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.87
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.87
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	99.87
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	99.87
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.87
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.87
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.86
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.86
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	99.86
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	99.86
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.86
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.86
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	99.86
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	99.86
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.86
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.86
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.86
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	99.86
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.86
3jro_A	753	Fusion protein of protein transport protein SEC13	99.85
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	99.85
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.85
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.85
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	99.85
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.85
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.84
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	99.84
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	99.84
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.84
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.84
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	99.84
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	99.84
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.84
3jrp_A	379	Fusion protein of protein transport protein SEC13	99.84
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.84
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.83
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	99.83
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.83
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.83
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	99.83
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	99.83
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	99.83
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.82
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	99.82
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.82
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	99.82
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.82
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.81
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	99.81
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.81
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.8
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	99.8
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.8
3jro_A	753	Fusion protein of protein transport protein SEC13	99.8
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.8
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.78
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.77
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.76
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	99.76
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.76
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.75
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	99.74
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.74
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.72
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.7
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.7
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.69
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.66
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.65
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.62
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.59
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.58
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.57
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.57
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.57
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.56
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.56
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.53
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.53
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.53
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.53
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.53
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.52
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.52
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.52
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.51
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.51
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.49
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.48
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.47
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.47
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.47
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.46
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.45
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.45
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.45
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.44
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.43
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.42
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.4
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.38
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.37
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.36
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.36
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.36
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.32
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.31
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.31
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.27
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.26
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.25
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.24
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.23
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.22
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.21
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.2
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.2
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.19
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.18
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.18
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.15
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.14
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.12
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.12
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.11
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.07
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.06
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.04
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.02
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.99
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	98.99
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.98
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	98.98
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.98
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.95
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.94
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.94
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	98.93
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.91
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	98.85
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	98.84
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.83
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.81
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.81
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.81
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	98.75
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	98.74
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.71
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	98.7
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.68
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	98.64
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.63
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.61
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.59
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.59
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	98.58
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.58
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.56
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.54
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	98.53
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.51
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.49
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.46
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.44
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.41
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.41
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.37
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.36
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.36
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.34
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.27
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.25
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.23
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.14
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.08
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.04
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.01
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.98
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	97.9
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.87
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.87
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	97.87
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.83
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	97.81
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	97.78
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.72
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.72
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.71
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.67
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.67
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.66
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.66
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	97.65
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	97.62
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.58
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.53
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.52
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.43
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	97.41
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.41
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.39
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.39
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	97.38
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.37
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.36
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.32
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.29
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.29
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.26
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.22
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	97.19
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.19
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.18
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.16
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.13
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	97.12
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.12
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.09
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.05
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.03
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	97.0
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	96.99
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.98
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.96
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	96.92
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	96.91
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.88
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	96.84
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.81
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	96.63
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.6
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.56
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.55
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.54
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	96.45
4a2l_A	795	BT_4663, two-component system sensor histidine kin	96.1
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	95.86
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	95.81
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	95.75
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	95.63
4a2l_A	795	BT_4663, two-component system sensor histidine kin	95.38
3kya_A	496	Putative phosphatase; structural genomics, joint c	95.31
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	94.89
3v9f_A	781	Two-component system sensor histidine kinase/RESP	94.62
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	94.17
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	94.1
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	94.05
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	94.04
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.03
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	93.41
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	93.26
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	92.98
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	92.87
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	92.64
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	92.02
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.99
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	91.89
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	91.34
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	91.17
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	91.1
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	90.55
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	90.34
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	90.31
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	89.98
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	89.81
3v9f_A	781	Two-component system sensor histidine kinase/RESP	89.72
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	89.55
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	89.48
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	89.37
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	89.28
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	88.44
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	88.35
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	88.19
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	88.13
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	88.11
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	87.68
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	86.48
3q6k_A	381	43.2 kDa salivary protein; beta propeller, binding	86.0
3f7f_A	729	Nucleoporin NUP120; nuclear pore complex, macromol	85.29
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	84.91
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	84.83
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	84.82
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	83.74
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	83.49
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	83.14
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	81.53
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	80.47

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.95  E-value=1.5e-25  Score=131.56  Aligned_cols=107  Identities=26%  Similarity=0.321  Sum_probs=101.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+..+      ...+.+++|+|+++++++++.|+.|++||+
T Consensus        12 h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A           12 RSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVT------ETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeecc------CCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            678999999999 8899999999999999999999989999888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus        85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D  118 (304)
T 2ynn_A           85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD  118 (304)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence            9999999999999999999999999999999976

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.94  E-value=4.5e-25  Score=130.53  Aligned_cols=107  Identities=19%  Similarity=0.239  Sum_probs=101.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|+++.+++++.|+.|++||+
T Consensus       205 h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h------~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~  277 (321)
T 3ow8_A          205 HAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGH------ASWVLNVAFCPDDTHFVSSSSDKSVKVWDV  277 (321)
T ss_dssp             CSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             cCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCC------CCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence            677899999999 8899999999999999999999888899888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..|...|.+++|+|++++|++++.|
T Consensus       278 ~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d  311 (321)
T 3ow8_A          278 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD  311 (321)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999999999999999876

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=99.94  E-value=1.6e-24  Score=128.21  Aligned_cols=107  Identities=21%  Similarity=0.288  Sum_probs=100.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +...+.+++|+| ++++|++++.++.|++||+.+++.+..+.+|      ...+.+++|+|+++++++++.|+.|++||+
T Consensus       163 ~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~spd~~~l~s~s~dg~i~iwd~  235 (321)
T 3ow8_A          163 RGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGH------AMPIRSLTFSPDSQLLVTASDDGYIKIYDV  235 (321)
T ss_dssp             SSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCCCEEEECTTSCEEEEECTTSCEEEEET
T ss_pred             CCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccc------CCceeEEEEcCCCCEEEEEcCCCeEEEEEC
Confidence            456789999999 8899999999999999999999999999888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++....+.+|...|.+++|+|++++|++++.|
T Consensus       236 ~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D  269 (321)
T 3ow8_A          236 QHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD  269 (321)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCcceeEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence            9999999999999999999999999999999876

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.93  E-value=7.7e-25  Score=133.08  Aligned_cols=107  Identities=20%  Similarity=0.252  Sum_probs=101.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|+++.|+| ++.++++++.|+.|++||..+++....+.+|      ...|.+++|+|+++++++++.|+.|++||+
T Consensus       107 h~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h------~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~  179 (410)
T 1vyh_C          107 HRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGH------TDSVQDISFDHSGKLLASCSADMTIKLWDF  179 (410)
T ss_dssp             CSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCC------SSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred             cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecc------CCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence            778999999999 7899999999999999999999999999988      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D  213 (410)
T 1vyh_C          180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD  213 (410)
T ss_dssp             TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            9999999999999999999999999999999876

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.93  E-value=1.5e-24  Score=135.74  Aligned_cols=106  Identities=18%  Similarity=0.371  Sum_probs=98.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|++++|+| ++++|++++.|+.|++||. +++.+..+.+|      ...|.+++|+|+++++++++.|+.|++||
T Consensus        14 GH~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~~~~~l~gh------~~~V~~l~fspdg~~las~~~d~~i~vWd   85 (577)
T 2ymu_A           14 AHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH------SSSVWGVAFSPDGQTIASASDDKTVKLWN   85 (577)
T ss_dssp             CCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECC------SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCCEEEEEeCC------CCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence            3889999999999 8899999999999999995 68888999998      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      . +++.+..+.+|...|.+++|+|++++|++++.|
T Consensus        86 ~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d  119 (577)
T 2ymu_A           86 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD  119 (577)
T ss_dssp             T-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             C-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCC
Confidence            5 578888899999999999999999999998865

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.93  E-value=4.5e-24  Score=126.05  Aligned_cols=109  Identities=20%  Similarity=0.295  Sum_probs=98.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-----CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-----GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .|.+.|.+++|+|+++++|++++.|+.+++|++..     +.++..+.+|      ...|.+++|+|+++++++++.|+.
T Consensus        15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h------~~~v~~~~~s~dg~~l~s~s~D~~   88 (319)
T 3frx_A           15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGH------SHIVQDCTLTADGAYALSASWDKT   88 (319)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCC------cccEEEEEECCCCCEEEEEeCCCE
Confidence            48899999999995568999999999999999863     2346677888      678999999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++||+++++.+..+.+|...|.+++|+|++++|++++.|
T Consensus        89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D  128 (319)
T 3frx_A           89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD  128 (319)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred             EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC
Confidence            9999999999999999999999999999999999999876

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.93  E-value=9.4e-24  Score=125.57  Aligned_cols=109  Identities=20%  Similarity=0.356  Sum_probs=98.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+.....    ...+.+++|+|+++++++++.|+.|++||+
T Consensus       225 h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~----~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~  299 (340)
T 1got_B          225 HESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNI----ICGITSVSFSKSGRLLLAGYDDFNCNVWDA  299 (340)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC----CSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             CcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCc----ccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence            678899999999 889999999999999999998887777654321    346999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D  333 (340)
T 1got_B          300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD  333 (340)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCC
Confidence            9999999999999999999999999999999986

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.93  E-value=1.6e-23  Score=123.07  Aligned_cols=108  Identities=21%  Similarity=0.313  Sum_probs=101.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+| +++++++++.|+.+++|+..+++....+.+|      ...+.+++|+|+++++++++.|+.|++||
T Consensus        21 gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d~~i~vwd   93 (312)
T 4ery_A           21 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSNLLVSASDDKTLKIWD   93 (312)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccC------CCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence            3778999999999 8899999999999999999999888888888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+..+..|...+.+++|+|++++|++++.|
T Consensus        94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  128 (312)
T 4ery_A           94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD  128 (312)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence            99999999999999999999999999999999875

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=99.93  E-value=9.8e-24  Score=123.86  Aligned_cols=107  Identities=20%  Similarity=0.338  Sum_probs=97.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.++.|+| +++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|+++++++++.|+.|++||+
T Consensus        54 ~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~  126 (304)
T 2ynn_A           54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNW  126 (304)
T ss_dssp             CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred             cCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcEEEEEeCC------CCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence            567899999999 7899999999999999999999999999998      678999999999999999999999999999


Q ss_pred             CCC-eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +++ .....+.+|...|.+++|+| ++..|++++.|
T Consensus       127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D  162 (304)
T 2ynn_A          127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD  162 (304)
T ss_dssp             GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred             CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence            877 55567788999999999999 67899999876

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.92  E-value=1.4e-23  Score=125.21  Aligned_cols=106  Identities=19%  Similarity=0.243  Sum_probs=91.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~   82 (116)
                      ...+.+++|+|++++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++ +++++++.|+.|++||+
T Consensus       214 ~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h------~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~  287 (344)
T 4gqb_B          214 GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVH------SQCVTGLVFSPHSVPFLASLSEDCSLAVLDS  287 (344)
T ss_dssp             CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECC------SSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred             eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCC------CCCEEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence            3467899999977788999999999999999999999999998      6789999999997 58999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      .+++... +.+|...|++++|+|+++ +|+++|.|
T Consensus       288 ~~~~~~~-~~~H~~~V~~v~~sp~~~~llas~s~D  321 (344)
T 4gqb_B          288 SLSELFR-SQAHRDFVRDATWSPLNHSLLTTVGWD  321 (344)
T ss_dssp             TCCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             CCCcEEE-EcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence            9887654 567999999999999986 56788876

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.92  E-value=1.2e-23  Score=125.99  Aligned_cols=107  Identities=13%  Similarity=0.210  Sum_probs=95.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~   81 (116)
                      +...+.+++|+|+++.++++++.++.|++||+.+++.+..+.++      ...|.+++|+|++ +++++++.|+.|++||
T Consensus       225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~------~~~v~~l~~sp~~~~~lasgs~D~~i~iwd  298 (357)
T 4g56_B          225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH------SQNITGLAYSYHSSPFLASISEDCTVAVLD  298 (357)
T ss_dssp             CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC------SSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred             ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc------ceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence            45678999999966778999999999999999999999999888      6789999999986 6899999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +++++.++.+ +|...|++++|+| ++++|++++.|
T Consensus       299 ~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~D  333 (357)
T 4g56_B          299 ADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWD  333 (357)
T ss_dssp             TTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             CCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCC
Confidence            9999887765 6889999999998 79999999976

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.92  E-value=2.5e-23  Score=123.80  Aligned_cols=109  Identities=18%  Similarity=0.220  Sum_probs=97.2

Q ss_pred             CCCCCceEEEE-----ccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCCCEEE
Q psy17133          2 FYNGTPTSIDF-----VRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI   69 (116)
Q Consensus         2 ~~~~~v~~~~~-----~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~   69 (116)
                      .|.+.|+++.|     ++.++++|++++.|+.|++||+...       .+...+.+|      ...|.+++|+|++.+++
T Consensus        19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h------~~~V~~~~~~~~~~~l~   92 (343)
T 2xzm_R           19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH------NHFVSDLALSQENCFAI   92 (343)
T ss_dssp             CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCC------SSCEEEEEECSSTTEEE
T ss_pred             cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccC------CCceEEEEECCCCCEEE
Confidence            37889999999     6546789999999999999998743       345567777      67899999999999999


Q ss_pred             EEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         70 TAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        70 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++.|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|
T Consensus        93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d  139 (343)
T 2xzm_R           93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE  139 (343)
T ss_dssp             EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT
T ss_pred             EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC
Confidence            99999999999999999999999999999999999999999999875

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.92  E-value=2.7e-23  Score=124.26  Aligned_cols=109  Identities=21%  Similarity=0.346  Sum_probs=97.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.+++|+| +++.+++++.|+.+++||+..++.+..+..+..    ...+.+++|+|++.++++++.|+.|++||+
T Consensus       239 h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~----~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~  313 (354)
T 2pbi_B          239 HESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVAIYSKESI----IFGASSVDFSLSGRLLFAGYNDYTINVWDV  313 (354)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC----CSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc----ccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence            678899999999 789999999999999999998877766654421    346889999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       314 ~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D  347 (354)
T 2pbi_B          314 LKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWD  347 (354)
T ss_dssp             TTCSEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             CCCceEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence            9999999999999999999999999999999986

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=99.92  E-value=6.3e-23  Score=120.50  Aligned_cols=108  Identities=20%  Similarity=0.341  Sum_probs=100.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|.+++|+| +++++++++.++.+++||+.+++.+..+.+|      ...+.++.|+|++.++++++.|+.|++||
T Consensus        63 ~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~d~~i~iwd  135 (312)
T 4ery_A           63 GHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH------SNYVFCCNFNPQSNLIVSGSFDESVRIWD  135 (312)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             cCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCC------CCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence            3678899999999 8899999999999999999999999999888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+..+..|...+.+++|+|++++|++++.|
T Consensus       136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  170 (312)
T 4ery_A          136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD  170 (312)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence            99999999998899999999999999999999875

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=99.92  E-value=2e-23  Score=126.86  Aligned_cols=108  Identities=15%  Similarity=0.217  Sum_probs=101.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++..+++++.|+.|++||
T Consensus       148 ~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h------~~~V~~v~~~p~~~~l~s~s~D~~i~~wd  220 (410)
T 1vyh_C          148 GHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQGFECIRTMHGH------DHNVSSVSIMPNGDHIVSASRDKTIKMWE  220 (410)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTSSCEEECCCCC------SSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred             ccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEcCC------CCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            3778999999999 7899999999999999999988888888888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+..+.+|...+..+.|+|++++|++++.|
T Consensus       221 ~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D  255 (410)
T 1vyh_C          221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND  255 (410)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence            99999999999999999999999999999999876

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=99.92  E-value=2.5e-23  Score=130.22  Aligned_cols=106  Identities=18%  Similarity=0.367  Sum_probs=97.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|.+++|+| ++++|++++.|+.|++|+. +++.+..+.+|      ...|++++|+|+++++++++.|+.|++||
T Consensus       465 ~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~~~~~~~h------~~~v~~l~~s~dg~~l~s~~~dg~v~lwd  536 (577)
T 2ymu_A          465 GHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGH------SSSVRGVAFSPDGQTIASASDDKTVKLWN  536 (577)
T ss_dssp             CCSSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCEEEEEECC------SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             CCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCC------CCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence            3678899999999 8899999999999999996 58888899988      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      . +++.+..+.+|...|.+++|+||+++|++++.|
T Consensus       537 ~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D  570 (577)
T 2ymu_A          537 R-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSD  570 (577)
T ss_dssp             T-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence            5 688889999999999999999999999999876

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=99.92  E-value=7.8e-23  Score=122.31  Aligned_cols=107  Identities=21%  Similarity=0.327  Sum_probs=99.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~~   80 (116)
                      |.+.|.++.|+| ++..+++++.|+.|++||+.+++.+..+.+|      ...+.+++++|  ++..+++++.|+.|++|
T Consensus       153 h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w  225 (354)
T 2pbi_B          153 HTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGH------GADVLCLDLAPSETGNTFVSGGCDKKAMVW  225 (354)
T ss_dssp             CSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred             cCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC------CCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence            677899999999 7789999999999999999999999999988      67899999987  46899999999999999


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+++++.+..+..|...|.+++|+|++++|++++.|
T Consensus       226 d~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D  261 (354)
T 2pbi_B          226 DMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD  261 (354)
T ss_dssp             ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence            999999999999999999999999999999999876

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.92  E-value=5.8e-23  Score=121.79  Aligned_cols=107  Identities=11%  Similarity=0.149  Sum_probs=90.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-------CceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-------GKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      |.+.|.+++|+| ++++|++++.|+.|++|+...       .+.+..+.+|      ...|.+++|+|+++++++++.|+
T Consensus        57 h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~sp~g~~las~s~D~  129 (330)
T 2hes_X           57 HKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH------ENEVKGVAWSNDGYYLATCSRDK  129 (330)
T ss_dssp             CCSCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----------CEEEEEECTTSCEEEEEETTS
T ss_pred             ccCCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC------CCcEEEEEECCCCCEEEEEeCCC
Confidence            778899999999 789999999999999999853       3455667777      67899999999999999999999


Q ss_pred             eEEEEECCC----CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVS----GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|++||+..    .+.+..+..|...|.+++|+|++++|++++.|
T Consensus       130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D  174 (330)
T 2hes_X          130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD  174 (330)
T ss_dssp             CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred             EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence            999999943    25667788899999999999999999999876

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.92  E-value=2.3e-23  Score=125.47  Aligned_cols=114  Identities=17%  Similarity=0.274  Sum_probs=98.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .|.+.|.+++|+| +++++++++.|+.+++||+.+++.+..+..+... ..+...+.+++|+|+++++++++.|+.|++|
T Consensus       247 ~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw  325 (380)
T 3iz6_a          247 GHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW  325 (380)
T ss_dssp             CCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred             CcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence            3778999999999 8899999999999999999999888877654221 0112348899999999999999999999999


Q ss_pred             ECCCCeEEEEe----ecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSM----VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.+++.+..+    .+|...|.+++|+|++++|++++.|
T Consensus       326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D  365 (380)
T 3iz6_a          326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD  365 (380)
T ss_dssp             ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred             ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence            99988888776    5688899999999999999999986

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.92  E-value=2.2e-23  Score=125.21  Aligned_cols=107  Identities=18%  Similarity=0.240  Sum_probs=91.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCC----eEEEEECCCCce----eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNS----ACVLFDLETGKP----VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~----~v~i~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      |...|.+++|+| ++..+++++.++    .+.+|+......    ...+.++      ...|.+++|+|+++++++++.|
T Consensus       218 ~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~------~~~V~~~~~Spdg~~lasgs~D  290 (365)
T 4h5i_A          218 KNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR------FKGITSMDVDMKGELAVLASND  290 (365)
T ss_dssp             TTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS------CSCEEEEEECTTSCEEEEEETT
T ss_pred             CCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceecceeeeeecCC------CCCeEeEEECCCCCceEEEcCC
Confidence            556789999999 789998888665    578888875543    3345566      5689999999999999999999


Q ss_pred             CeEEEEECCCCeEEEEe-ecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSM-VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|++||+++++.+..+ .+|...|++++|+|||++|+++|.|
T Consensus       291 ~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D  333 (365)
T 4h5i_A          291 NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA  333 (365)
T ss_dssp             SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred             CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence            99999999999998875 6899999999999999999999987

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=99.92  E-value=4.9e-23  Score=122.92  Aligned_cols=105  Identities=19%  Similarity=0.253  Sum_probs=92.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE----ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI----DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      ...|.+++|+| + ..+++++.|+.|++||+.+++.+..+    .+|      ...|.+++|+|+++++++++.|+.|++
T Consensus        82 ~~~v~~~~~s~-d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H------~~~V~~v~~spdg~~l~sgs~d~~i~i  153 (344)
T 4gqb_B           82 EAGVADLTWVG-E-RGILVASDSGAVELWELDENETLIVSKFCKYEH------DDIVSTVSVLSSGTQAVSGSKDICIKV  153 (344)
T ss_dssp             SSCEEEEEEET-T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCCEEEEEEeC-C-CeEEEEECCCEEEEEeccCCCceeEeeccccCC------CCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence            46799999999 5 57889999999999999988755433    356      678999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ||+++++.+..+.+|...|.+++|+|++. +|++++.|
T Consensus       154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D  191 (344)
T 4gqb_B          154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED  191 (344)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred             EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc
Confidence            99999999999999999999999999885 78888876

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.91  E-value=6e-23  Score=129.97  Aligned_cols=109  Identities=19%  Similarity=0.229  Sum_probs=98.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+|++...+++++.|+.+++||..+++.+..+.+|      ...|.+++|+|+++++++++.|+.|++||
T Consensus       145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H------~~~V~~v~fspdg~~las~s~D~~i~lwd  218 (611)
T 1nr0_A          145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH------TKFVHSVRYNPDGSLFASTGGDGTIVLYN  218 (611)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccc------cCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence            367889999999943346999999999999999888888888888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEee-------cccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMV-------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.+..+.       +|...|.+++|+|++++|++++.|
T Consensus       219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D  260 (611)
T 1nr0_A          219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD  260 (611)
T ss_dssp             TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC
Confidence            99999888874       688999999999999999999876

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=99.91  E-value=9.2e-23  Score=121.32  Aligned_cols=106  Identities=19%  Similarity=0.387  Sum_probs=98.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.++.|++ + ..+++++.|+.|++||+.+++.+..+.+|      ...+.+++|+|+++++++++.|+.|++||+
T Consensus       142 h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~  213 (340)
T 1got_B          142 HTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQTTTFTGH------TGDVMSLSLAPDTRLFVSGACDASAKLWDV  213 (340)
T ss_dssp             CSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             CCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEEEEEcCC------CCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            677899999998 4 45888999999999999999999999888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++....+..|...|.+++|+|++++|++++.|
T Consensus       214 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d  247 (340)
T 1got_B          214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDD  247 (340)
T ss_dssp             TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence            9999999999999999999999999999999876

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.91  E-value=6.4e-23  Score=122.25  Aligned_cols=107  Identities=12%  Similarity=0.125  Sum_probs=92.8

Q ss_pred             CCC-CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE---EecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNG-TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR---IDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~-~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.+ .+..++|+| ++++|++++.|+.|++|+..+++....   ..+|      ...|.+++|+|+++++++++.|+.++
T Consensus        14 h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~g~~l~s~s~D~~v~   86 (345)
T 3fm0_A           14 HPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH------QRTVRKVAWSPCGNYLASASFDATTC   86 (345)
T ss_dssp             STTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSC------SSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeecccc------CCcEEEEEECCCCCEEEEEECCCcEE
Confidence            555 899999999 889999999999999999987654322   2455      67899999999999999999999999


Q ss_pred             EEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|+..++  +.+..+.+|...|.+++|+|++++|++++.|
T Consensus        87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D  126 (345)
T 3fm0_A           87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD  126 (345)
T ss_dssp             EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC
Confidence            9998766  4567788899999999999999999999876

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=99.91  E-value=1.1e-22  Score=121.15  Aligned_cols=107  Identities=13%  Similarity=0.206  Sum_probs=94.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |.+.|.+++|+| ++++|++++.|+.+++|+...+.  .+..+.+|      ...|.+++|+|+++++++++.|+.|++|
T Consensus        60 h~~~v~~~~~sp-~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h------~~~v~~v~~sp~~~~l~s~s~D~~v~iw  132 (345)
T 3fm0_A           60 HQRTVRKVAWSP-CGNYLASASFDATTCIWKKNQDDFECVTTLEGH------ENEVKSVAWAPSGNLLATCSRDKSVWVW  132 (345)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEEECCC-EEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             cCCcEEEEEECC-CCCEEEEEECCCcEEEEEccCCCeEEEEEccCC------CCCceEEEEeCCCCEEEEEECCCeEEEE
Confidence            678899999999 88999999999999999987653  46677788      6789999999999999999999999999


Q ss_pred             ECCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.++   +.+..+..|...|.+++|+|++++|++++.|
T Consensus       133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d  171 (345)
T 3fm0_A          133 EVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD  171 (345)
T ss_dssp             EECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred             ECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence            99765   3455677888999999999999999999876

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.91  E-value=1.5e-22  Score=129.59  Aligned_cols=109  Identities=19%  Similarity=0.227  Sum_probs=98.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-----ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-----KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .|.+.|++++|+|+++++|++++.|+.|++|++.+.     .....+.+|      ...|.+++|+|+++++++++.|+.
T Consensus       380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h------~~~v~~v~~s~~g~~l~sgs~Dg~  453 (694)
T 3dm0_A          380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGH------SHFVEDVVLSSDGQFALSGSWDGE  453 (694)
T ss_dssp             CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCC------CCcEEEEEECCCCCEEEEEeCCCc
Confidence            388999999999966789999999999999998753     235567788      678999999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++||+.+++....+.+|...|.+++|+|++++|++++.|
T Consensus       454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D  493 (694)
T 3dm0_A          454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD  493 (694)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            9999999999999999999999999999999999999876

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.91  E-value=1.9e-22  Score=122.05  Aligned_cols=108  Identities=18%  Similarity=0.324  Sum_probs=98.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC-------ceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG-------KPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d   74 (116)
                      |.+.|.+++|+|.++++|++++.|+.|++|++.++       +.+..+.+|      ...|.+++|+|++ .++++++.|
T Consensus        80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~l~s~~~d  153 (402)
T 2aq5_A           80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH------TKRVGIVAWHPTAQNVLLSAGCD  153 (402)
T ss_dssp             CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC------SSCEEEEEECSSBTTEEEEEETT
T ss_pred             CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC------CCeEEEEEECcCCCCEEEEEcCC
Confidence            78899999999966789999999999999999877       567788888      6789999999997 699999999


Q ss_pred             CeEEEEECCCCeEEEEe--ecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSM--VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|++||+.+++.+..+  ..|...+.+++|+|++++|++++.|
T Consensus       154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  197 (402)
T 2aq5_A          154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD  197 (402)
T ss_dssp             SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred             CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence            99999999999999888  7788999999999999999999875

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=99.91  E-value=2.5e-22  Score=127.17  Aligned_cols=113  Identities=16%  Similarity=0.220  Sum_probs=95.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |.+.|.+++|+| ++++|++++.|+.|++||..+++.+..+.. ......|...|.+++|+|+++.+++++.|+.|++||
T Consensus       189 H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd  267 (611)
T 1nr0_A          189 HTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWN  267 (611)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             ccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence            778899999999 889999999999999999998988877741 000112377899999999999999999999999999


Q ss_pred             CCCCeEEEE-------------------------------------------eecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHS-------------------------------------------MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.+..                                           +.+|...|.+++|+|++++|++++.|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D  345 (611)
T 1nr0_A          268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE  345 (611)
T ss_dssp             TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence            988765543                                           33677889999999999999999876

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.91  E-value=1.7e-22  Score=118.30  Aligned_cols=108  Identities=16%  Similarity=0.196  Sum_probs=94.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC--CceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET--GKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++|++..  .+.+..+.+|      ...|.+++|+|+  +.++++++.|++|
T Consensus         7 ~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH------~~~V~~v~~s~~~~g~~l~s~s~D~~v   79 (297)
T 2pm7_B            7 AHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV   79 (297)
T ss_dssp             SCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC------SSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred             CCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc------cCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence            4788999999999 889999999999999999974  3567888888      678999999863  8899999999999


Q ss_pred             EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      ++||+++++  .+..+..|...|.+++|+|+  +++|++++.|
T Consensus        80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d  122 (297)
T 2pm7_B           80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD  122 (297)
T ss_dssp             EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred             EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC
Confidence            999998774  45566778889999999997  8899999876

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.91  E-value=2.6e-22  Score=119.00  Aligned_cols=107  Identities=13%  Similarity=0.244  Sum_probs=91.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.+.|.+++|+| ++++|++++.|+.|++||+...    +.+..+.+|      ...|.+++|+|++.++++++.|+.|+
T Consensus       106 h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~l~s~s~D~~i~  178 (330)
T 2hes_X          106 HENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEH------SQDVKHVIWHPSEALLASSSYDDTVR  178 (330)
T ss_dssp             ---CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC------SSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred             CCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC------CCceEEEEECCCCCEEEEEcCCCeEE
Confidence            678899999999 7899999999999999999432    345667777      67899999999999999999999999


Q ss_pred             EEECCCC--eEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      +|+..++  +.+..+.+|...|.+++|+|+  +..|++++.|
T Consensus       179 iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D  220 (330)
T 2hes_X          179 IWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD  220 (330)
T ss_dssp             EEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred             EEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence            9998766  567788899999999999998  7789999876

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.90  E-value=8.7e-22  Score=117.12  Aligned_cols=107  Identities=17%  Similarity=0.210  Sum_probs=98.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+| +++++++++.++.|++||+.+++.+..+..|      ...+.+++|+|+++++++++.|+.|++||
T Consensus        30 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  102 (369)
T 3zwl_B           30 GHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGH------TGTIWSIDVDCFTKYCVTGSADYSIKLWD  102 (369)
T ss_dssp             CCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             EeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhc------CCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            3788999999999 8899999999999999999999999999888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.+..+. +...+.+++|+|+++++++++.+
T Consensus       103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~  136 (369)
T 3zwl_B          103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDN  136 (369)
T ss_dssp             TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECC
T ss_pred             CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCC
Confidence            99999988887 77889999999999999987653

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.90  E-value=8.1e-23  Score=120.56  Aligned_cols=108  Identities=17%  Similarity=0.257  Sum_probs=92.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++||+.+++  .+..+.+|      ...|.+++|+|  ++.++++++.|+.|
T Consensus        11 ~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH------~~~V~~v~~~~~~~~~~l~s~s~D~~v   83 (316)
T 3bg1_A           11 SHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGH------EGPVWQVAWAHPMYGNILASCSYDRKV   83 (316)
T ss_dssp             ---CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECC------SSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred             cccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC------CccEEEEEeCCCCCCCEEEEEECCCEE
Confidence            4788999999999 78999999999999999998764  45678888      67899999986  48899999999999


Q ss_pred             EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      ++||+++++  ....+.+|...|.+++|+|+  +.+|++++.|
T Consensus        84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D  126 (316)
T 3bg1_A           84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD  126 (316)
T ss_dssp             EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS
T ss_pred             EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC
Confidence            999998873  56667789999999999998  7899998875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.90  E-value=5.1e-22  Score=120.12  Aligned_cols=112  Identities=22%  Similarity=0.296  Sum_probs=95.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------CCCCceeEEEEcCCCCEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------SGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~~~   70 (116)
                      |.+.|.+++|+| ++++|++++ ++.+++|++.+++.+..+..+....            .+...|.+++|+|+++++++
T Consensus        63 h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s  140 (393)
T 1erj_A           63 HTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  140 (393)
T ss_dssp             CSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence            788999999999 789999877 6789999999998887776542100            01224889999999999999


Q ss_pred             EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d  186 (393)
T 1erj_A          141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD  186 (393)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC
Confidence            9999999999999999999999999999999999999999999876

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.90  E-value=4.7e-22  Score=128.49  Aligned_cols=107  Identities=25%  Similarity=0.317  Sum_probs=101.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| ++.++++++.++.|++||..+++.+..+.++      ...+.+++|+|+++++++++.|+.|++|++
T Consensus        12 h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~   84 (814)
T 3mkq_A           12 RSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVT------ETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (814)
T ss_dssp             ECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecC------CCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            778999999999 8899999999999999999999999999988      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..|...+.+++|+|++++|++++.|
T Consensus        85 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  118 (814)
T 3mkq_A           85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD  118 (814)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC
Confidence            9999999999999999999999999999998865

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.90  E-value=1.2e-21  Score=116.57  Aligned_cols=107  Identities=19%  Similarity=0.205  Sum_probs=98.0

Q ss_pred             CCCCceEEEEccCC----CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeE
Q psy17133          3 YNGTPTSIDFVRDE----STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHI   77 (116)
Q Consensus         3 ~~~~v~~~~~~~~~----~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i   77 (116)
                      |.+.|.+++|+| +    +.++++++.++.|++||+.+++.+..+.++      ...|.+++|+| ++..+++++.|+.|
T Consensus        68 ~~~~v~~~~~~~-~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~l~s~~~dg~i  140 (366)
T 3k26_A           68 ADENFYTCAWTY-DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGH------GNAINELKFHPRDPNLLLSVSKDHAL  140 (366)
T ss_dssp             TTCCEEEEEEEE-CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESC------CSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred             CCCcEEEEEecc-CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCC------CCcEEEEEECCCCCCEEEEEeCCCeE
Confidence            567899999999 5    568999999999999999999999999888      67899999999 89999999999999


Q ss_pred             EEEECCCCeEEEEe---ecccccEEEEEECCCCcEEEeeecC
Q psy17133         78 RFFDNVSGKLVHSM---VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++||+++++.+..+   ..|...+.+++|+|++++|++++.|
T Consensus       141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  182 (366)
T 3k26_A          141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD  182 (366)
T ss_dssp             EEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence            99999999998887   5788999999999999999999875

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.90  E-value=9.4e-22  Score=115.91  Aligned_cols=108  Identities=9%  Similarity=0.097  Sum_probs=95.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCC
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDR   75 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~   75 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++|++.++    +....+.+|      ...|.+++|+|  ++.++++++.|+
T Consensus         9 gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~d~~~l~s~~~dg   81 (351)
T 3f3f_A            9 GHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH------DSSIVAIDWASPEYGRIIASASYDK   81 (351)
T ss_dssp             CCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC------SSCEEEEEECCGGGCSEEEEEETTS
T ss_pred             ccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccC------CCcEEEEEEcCCCCCCEEEEEcCCC
Confidence            4789999999999 8899999999999999999865    355666777      67899999999  589999999999


Q ss_pred             eEEEEECCCC---------eEEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         76 HIRFFDNVSG---------KLVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      .|++||+.++         +.+..+..|...+.+++|+|+  +++|++++.|
T Consensus        82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  133 (351)
T 3f3f_A           82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND  133 (351)
T ss_dssp             CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred             eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence            9999999876         567777788999999999999  9999998875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=99.89  E-value=2.8e-21  Score=116.86  Aligned_cols=103  Identities=23%  Similarity=0.371  Sum_probs=94.1

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      .|.+++|+| +++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++..+++++.|+.|++||++++
T Consensus       125 ~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~  197 (393)
T 1erj_A          125 YIRSVCFSP-DGKFLATGAEDRLIRIWDIENRKIVMILQGH------EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG  197 (393)
T ss_dssp             BEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred             eEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEccC------CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence            488999999 8899999999999999999999888899888      678999999999999999999999999999999


Q ss_pred             eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         86 KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        86 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +....+. +...+..++|+| ++++|++++.|
T Consensus       198 ~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d  228 (393)
T 1erj_A          198 QCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLD  228 (393)
T ss_dssp             EEEEEEE-CSSCEEEEEECSTTCCEEEEEETT
T ss_pred             eeEEEEE-cCCCcEEEEEECCCCCEEEEEcCC
Confidence            8887776 456799999999 89999999875

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=99.89  E-value=3.9e-21  Score=113.53  Aligned_cols=106  Identities=17%  Similarity=0.252  Sum_probs=95.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.++.|+| +++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++..+++++.|+.|++||+
T Consensus        64 h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~  136 (319)
T 3frx_A           64 HSHIVQDCTLTA-DGAYALSASWDKTLRLWDVATGETYQRFVGH------KSDVMSVDIDKKASMIISGSRDKTIKVWTI  136 (319)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred             CcccEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCeeEEEccC------CCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence            778899999999 8899999999999999999999999999988      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCC------CcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQ------GLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~s~d  116 (116)
                      + ++.+..+.+|...+..+.|.|.      +..+++++.|
T Consensus       137 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d  175 (319)
T 3frx_A          137 K-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGND  175 (319)
T ss_dssp             T-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETT
T ss_pred             C-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCC
Confidence            7 5667778889999999999985      4478888865

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=99.89  E-value=1.5e-21  Score=116.90  Aligned_cols=114  Identities=11%  Similarity=0.120  Sum_probs=96.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.+.|.+++|+| ++++|++++.++.|++||+.+++.+..+.+|....                               
T Consensus       137 ~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~  215 (357)
T 4g56_B          137 EHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK  215 (357)
T ss_dssp             CCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred             CCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence            3678899999999 88999999999999999999888877776654321                               


Q ss_pred             --------CCCCceeEEEEcCC-CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133         51 --------SGGGGINRVVCHPT-LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ  116 (116)
Q Consensus        51 --------~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d  116 (116)
                              .+...+.+++|+|+ +.++++++.|+.|++||+++++.+..+..|...|.+++|+|++ ++|++++.|
T Consensus       216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D  291 (357)
T 4g56_B          216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED  291 (357)
T ss_dssp             CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred             eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC
Confidence                    23445788999997 5688899999999999999999888898899999999999987 578898876

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.89  E-value=4e-21  Score=114.24  Aligned_cols=108  Identities=12%  Similarity=0.205  Sum_probs=94.6

Q ss_pred             CCCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCC-Ccee-EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLET-GKPV-VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~-~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+|++  +++|++++.++.|++|++.+ +..+ ..+.+|      ...|.+++|+|+++++++++.|+.|
T Consensus        37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~dg~v  110 (368)
T 3mmy_A           37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH------TGPVLDVCWSDDGSKVFTASCDKTA  110 (368)
T ss_dssp             CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc------cCCEEEEEECcCCCEEEEEcCCCcE
Confidence            378899999999943  69999999999999999987 4444 667777      6789999999999999999999999


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEE--CCCCcEEEeeecC
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAV--DPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~s~d  116 (116)
                      ++||+.+++.+. +..|...+.+++|  +|++++|++++.|
T Consensus       111 ~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~d  150 (368)
T 3mmy_A          111 KMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWD  150 (368)
T ss_dssp             EEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETT
T ss_pred             EEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCC
Confidence            999999988776 4458889999999  9999999999865

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=99.89  E-value=5.3e-21  Score=113.81  Aligned_cols=107  Identities=19%  Similarity=0.218  Sum_probs=93.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|...|.+++|+| ++.++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|+++.+++++.|+.|++||
T Consensus        74 ~h~~~V~~~~~~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h------~~~v~~v~~sp~~~~l~s~~~d~~i~~wd  146 (343)
T 2xzm_R           74 GHNHFVSDLALSQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGH------QSEVYSVAFSPDNRQILSAGAEREIKLWN  146 (343)
T ss_dssp             CCSSCEEEEEECS-STTEEEEEETTSEEEEEETTSSCEEEEEECC------CSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred             cCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCC------CCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence            3678899999999 7899999999999999999999999999988      67899999999999999999999999999


Q ss_pred             CCCCeEEEEee---cccccEEEEEECCCC----------cEEEeeecC
Q psy17133         82 NVSGKLVHSMV---AHLDAVTSLAVDPQG----------LYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~s~d  116 (116)
                      +... ......   .|...+.+++|+|++          .+|++++.|
T Consensus       147 ~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d  193 (343)
T 2xzm_R          147 ILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD  193 (343)
T ss_dssp             SSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT
T ss_pred             ccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC
Confidence            9843 333333   577789999999987          789988865

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=99.89  E-value=1.9e-21  Score=117.21  Aligned_cols=108  Identities=22%  Similarity=0.258  Sum_probs=94.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |...|.++.|++.+++++++++.|+.|++||+. .++.+..+.+|      ...|.+++|+|++..+++++.|+.|++||
T Consensus       204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~l~s~s~D~~i~lwd  277 (380)
T 3iz6_a          204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH------EGDINSVKFFPDGQRFGTGSDDGTCRLFD  277 (380)
T ss_dssp             CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC------SSCCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred             CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCc------CCCeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence            567889999987678999999999999999997 45677888888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeeccc-------ccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+..+..+.       ..+.+++|+|++++|++++.|
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d  319 (380)
T 3iz6_a          278 MRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN  319 (380)
T ss_dssp             TTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred             CCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence            99999888776432       247899999999999998765

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=1.9e-21  Score=115.69  Aligned_cols=109  Identities=8%  Similarity=0.014  Sum_probs=93.5

Q ss_pred             CCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |.+.|.+++|+|. +++++++++.|+.+++||+.+++.......+.     ...+.+++|+|++.++++++.|+.|++||
T Consensus       124 ~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-----~~~i~~~~~~pdg~~lasg~~dg~i~iwd  198 (343)
T 3lrv_A          124 SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-----DVEYSSGVLHKDSLLLALYSPDGILDVYN  198 (343)
T ss_dssp             CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-----SCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred             CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-----CCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            4578999999982 35889999999999999999888766654442     34699999999999999999999999999


Q ss_pred             CCCCeEE-EEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLV-HSMVA-HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+ ..+.. |...|.+++|+|++++|++++.|
T Consensus       199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~  235 (343)
T 3lrv_A          199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ  235 (343)
T ss_dssp             SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred             CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence            9999877 77777 89999999999999999998853

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.89  E-value=4e-21  Score=114.65  Aligned_cols=108  Identities=13%  Similarity=0.168  Sum_probs=96.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      +|.+.|.+++|+| +++++++++.++.|++|+..+++  .+..+.+|      ...+.+++|+|+++++++++.|+.|++
T Consensus         6 ~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~~~~~dg~i~v   78 (372)
T 1k8k_C            6 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH------NGQVTGVDWAPDSNRIVTCGTDRNAYV   78 (372)
T ss_dssp             SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECC------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             ccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC------CCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence            4788999999999 88999999999999999998876  77888887      678999999999999999999999999


Q ss_pred             EECCCCeEEEEe--ecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSM--VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++++.....  ..|...+.+++|+|++++|++++.|
T Consensus        79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  117 (372)
T 1k8k_C           79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS  117 (372)
T ss_dssp             EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC
Confidence            999988755443  4678899999999999999998865

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.88  E-value=5.4e-21  Score=115.07  Aligned_cols=106  Identities=13%  Similarity=0.171  Sum_probs=98.1

Q ss_pred             CCCceEEEEccCCCcEEEEeeCC---CeEEEEECCCCceeEEEec-------------CCcCcCCCCceeEEEEcCCCCE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDN---SACVLFDLETGKPVVRIDS-------------SQFGVSGGGGINRVVCHPTLPL   67 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~---~~v~i~~~~~~~~~~~~~~-------------~~~~~~~~~~i~~~~~~~~~~~   67 (116)
                      ...|.+++|+| +++++++++.+   +.|++||+.+++.+..+..             +      ...+.+++|+|++++
T Consensus       233 ~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~  305 (397)
T 1sq9_A          233 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH------SSWVMSLSFNDSGET  305 (397)
T ss_dssp             CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB------SSCEEEEEECSSSSE
T ss_pred             CCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc------CCcEEEEEECCCCCE
Confidence            78899999999 78999999999   9999999999998888887             6      678999999999999


Q ss_pred             EEEEeCCCeEEEEECCCCeEEEEee------cc---------------cccEEEEEECCCC----------cEEEeeecC
Q psy17133         68 TITAHDDRHIRFFDNVSGKLVHSMV------AH---------------LDAVTSLAVDPQG----------LYILSGTYQ  116 (116)
Q Consensus        68 ~~~~~~d~~i~~~~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~~~s~d  116 (116)
                      +++++.|+.|++||+.+++.+..+.      .|               ...|.+++|+|++          ++|++++.|
T Consensus       306 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d  385 (397)
T 1sq9_A          306 LCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD  385 (397)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT
T ss_pred             EEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCC
Confidence            9999999999999999999999988      77               8899999999998          799999876

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.88  E-value=1.9e-21  Score=118.84  Aligned_cols=108  Identities=13%  Similarity=0.127  Sum_probs=88.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE--EecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR--IDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~~   79 (116)
                      |...|++++|+|.++++|++|+.|+.|++||+.+++....  +.+|      .+.|.+++|+| ++.+|++++.|++|++
T Consensus       118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH------~~~V~~l~f~p~~~~~l~s~s~D~~v~i  191 (435)
T 4e54_B          118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGA------GGSITGLKFNPLNTNQFYASSMEGTTRL  191 (435)
T ss_dssp             CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSS------SCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred             CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCC------CCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence            5678999999997778999999999999999987664443  3456      67899999998 5889999999999999


Q ss_pred             EECCCCeEEEEeecc--cccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAH--LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||++++........+  ...+.+++|+|++++|++++.|
T Consensus       192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d  230 (435)
T 4e54_B          192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV  230 (435)
T ss_dssp             EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS
T ss_pred             eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            999866554333322  3357789999999999999865

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.88  E-value=2e-21  Score=115.98  Aligned_cols=108  Identities=16%  Similarity=0.201  Sum_probs=95.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+| ++++|++++.++.|++|++.  +++.+..+.+|      ...|.+++|+|+  +.++++++.|+.|
T Consensus         9 ~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~l~s~~~dg~v   81 (379)
T 3jrp_A            9 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV   81 (379)
T ss_dssp             ECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred             CCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCC------CCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence            3789999999999 78999999999999999997  45566777777      678999999977  8999999999999


Q ss_pred             EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      ++||+.+++  .+..+..|...+.+++|+|+  +++|++++.|
T Consensus        82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d  124 (379)
T 3jrp_A           82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD  124 (379)
T ss_dssp             EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred             EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence            999999887  66667778899999999999  9999998865

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.88  E-value=2.7e-21  Score=114.67  Aligned_cols=111  Identities=12%  Similarity=0.111  Sum_probs=79.1

Q ss_pred             CCCCceEEEEcc--CCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc------------------
Q psy17133          3 YNGTPTSIDFVR--DESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH------------------   62 (116)
Q Consensus         3 ~~~~v~~~~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------------------   62 (116)
                      |...+..++|++  .++..|++++.|+.|++||+.+++.+..+.++...   ...+..++|+                  
T Consensus       177 ~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~---v~~v~~vafSpdG~~lvs~s~~~~~w~l  253 (356)
T 2w18_A          177 MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSY---QASVCHKAYSEMGLLFIVLSHPCAKESE  253 (356)
T ss_dssp             CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC------CCCEEEEEEETTEEEEEEC--------
T ss_pred             CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcc---eeeeEEEEECCCCCEEEEeccCCCccee
Confidence            344455555554  34578889999999999999999999988754210   0112222222                  


Q ss_pred             ---------------------------CCCC------------EEEEEeCCCeEEEEECCCCeEEEEeecccccEE-EEE
Q psy17133         63 ---------------------------PTLP------------LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVT-SLA  102 (116)
Q Consensus        63 ---------------------------~~~~------------~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~-~~~  102 (116)
                                                 |++.            ++++++.|++|++||+.+++.+.++.+|...+. .++
T Consensus       254 aSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~va  333 (356)
T 2w18_A          254 SLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVK  333 (356)
T ss_dssp             ----CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEE
T ss_pred             eccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence                                       2222            467788899999999999999999988876555 589


Q ss_pred             ECCCCcEEEeeecC
Q psy17133        103 VDPQGLYILSGTYQ  116 (116)
Q Consensus       103 ~~~~~~~l~~~s~d  116 (116)
                      |+|+|++|++|+.|
T Consensus       334 fSPDG~~LaSGS~D  347 (356)
T 2w18_A          334 WSGTDSHLLAGQKD  347 (356)
T ss_dssp             ECSSSSEEEEECTT
T ss_pred             ECCCCCEEEEEECC
Confidence            99999999999987

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.88  E-value=1.2e-21  Score=118.72  Aligned_cols=108  Identities=13%  Similarity=0.235  Sum_probs=94.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++..+++++.|+.|++||
T Consensus       137 ~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  209 (420)
T 3vl1_A          137 AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGH------RATVTDIAIIDRGRNVLSASLDGTIRLWE  209 (420)
T ss_dssp             SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECC------SSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCC------CCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence            4788999999999 7899999999999999999999999999888      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecc---ccc---------------------EEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAH---LDA---------------------VTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~---~~~---------------------v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+..+..+   ...                     +..++|+|++++|++++.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  268 (420)
T 3vl1_A          210 CGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS  268 (420)
T ss_dssp             TTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT
T ss_pred             CCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC
Confidence            9999988887642   233                     4445568899999998865

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.88  E-value=1.2e-20  Score=111.48  Aligned_cols=109  Identities=19%  Similarity=0.258  Sum_probs=96.4

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .|.+.|++++|+|+++++|++++.|+.|++||+.+.+     +...+.+|      ...|.+++|+|+++++++++.|+.
T Consensus        36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h------~~~V~~~~~s~dg~~l~s~~~d~~  109 (340)
T 4aow_A           36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGH------SHFVSDVVISSDGQFALSGSWDGT  109 (340)
T ss_dssp             CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSE
T ss_pred             CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCC------CCCEEEEEECCCCCEEEEEccccc
Confidence            3889999999999667899999999999999987543     35566777      678999999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++|+............+...+....+++++++|++++.|
T Consensus       110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d  149 (340)
T 4aow_A          110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD  149 (340)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC
Confidence            9999999998888887788888999999999999998865

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.88  E-value=1.7e-21  Score=122.47  Aligned_cols=106  Identities=19%  Similarity=0.231  Sum_probs=97.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec-CCcCcCCCCceeEEEEcC----------CCCEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS-SQFGVSGGGGINRVVCHP----------TLPLTITA   71 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~----------~~~~~~~~   71 (116)
                      |.+.|.+++|+| ++++|++++.++.+++|++.+++.+..+.+ |      ...+.+++|+|          ++++++++
T Consensus       487 ~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~~~~~~~~l~~~  559 (615)
T 1pgu_A          487 LRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFR------TSKINAISWKPAEKGANEEEIEEDLVATG  559 (615)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCC------SSCEEEEEECCCC------CCSCCEEEEE
T ss_pred             ccCceEEEEECC-CCCEEEEcCCCCeEEEeeCCCCcceeEeecCC------CCceeEEEEcCccccccccccCCCEEEEE
Confidence            678899999999 889999999999999999999988888776 6      67899999999          99999999


Q ss_pred             eCCCeEEEEECCCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         72 HDDRHIRFFDNVSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        72 ~~d~~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|+.|++|+++++ +.+..+.+|...|.+++|+|+++ |++++.|
T Consensus       560 ~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d  604 (615)
T 1pgu_A          560 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGAD  604 (615)
T ss_dssp             ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETT
T ss_pred             cCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCC
Confidence            99999999999987 78888888999999999999999 9998876

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=99.88  E-value=1.3e-20  Score=120.68  Aligned_cols=114  Identities=18%  Similarity=0.222  Sum_probs=92.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++||+.+++.+..+.+|...+                               
T Consensus       428 ~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~  506 (694)
T 3dm0_A          428 GHSHFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK  506 (694)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred             CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence            3778899999999 88999999999999999999888887777774321                               


Q ss_pred             --------CCCCceeEEEEcCCC--CEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 --------SGGGGINRVVCHPTL--PLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 --------~~~~~i~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                              .|...+.+++|+|++  ..+++++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|
T Consensus       507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D  582 (694)
T 3dm0_A          507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD  582 (694)
T ss_dssp             EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence                    244456677777764  467777777777777777777777888899999999999999999999876

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.88  E-value=8.4e-23  Score=122.37  Aligned_cols=107  Identities=14%  Similarity=0.127  Sum_probs=90.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      +.+.|.+++|+| ++++|++++.++.|++|++.++  +.+..+.+|      ...|.+++|+|+++++++++.|+.|++|
T Consensus        10 ~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~s~d~~v~vw   82 (377)
T 3dwl_C           10 LPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDH------DKIVTCVDWAPKSNRIVTCSQDRNAYVY   82 (377)
T ss_dssp             CSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCC------SSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred             CCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecC------CceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence            467899999999 8899999999999999999887  667777777      6789999999999999999999999999


Q ss_pred             ECCCCe---EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGK---LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.+++   ....+..|...+.+++|+|++++|++++.|
T Consensus        83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  121 (377)
T 3dwl_C           83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA  121 (377)
T ss_dssp             ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred             EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence            999877   566677789999999999999999998875

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.88  E-value=2.3e-20  Score=109.97  Aligned_cols=108  Identities=15%  Similarity=0.244  Sum_probs=96.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .|...|.++.|+| +++++++++.++.+++||+.+++  ....+..+      ...+.+++|+|+++.+++++.|+.|++
T Consensus        95 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~v~~  167 (337)
T 1gxr_A           95 NRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDSKVCFSCCSDGNIAV  167 (337)
T ss_dssp             CTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECS------SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccC------CCceEEEEECCCCCEEEEEeCCCcEEE
Confidence            3677899999999 88999999999999999998776  45566666      568999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++++.+..+..|...+.+++|+|++++|++++.|
T Consensus       168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  204 (337)
T 1gxr_A          168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence            9999999999998899999999999999999998865

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.88  E-value=1.8e-20  Score=109.84  Aligned_cols=62  Identities=18%  Similarity=0.295  Sum_probs=50.6

Q ss_pred             ceeEEEEcCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         55 GINRVVCHPTLPLTITAH--DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+..+.++|++..+++++  .|+.|++||+++++.+..+.+|.+.|++++|+|++++|+++|.|
T Consensus       242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D  305 (318)
T 4ggc_A          242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD  305 (318)
T ss_dssp             CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence            344566666666555543  67888888888889999999999999999999999999999987

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=99.88  E-value=7.4e-22  Score=118.29  Aligned_cols=108  Identities=12%  Similarity=0.124  Sum_probs=87.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .|.+.|.+++|+| ++++|++++.|+.+++||+.+++   ....+..+      ...+.+++|+|+++.+++++.|+.|+
T Consensus        53 ~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~  125 (377)
T 3dwl_C           53 DHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL------NRAATFVRWSPNEDKFAVGSGARVIS  125 (377)
T ss_dssp             CCSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCC------SSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred             cCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc------CCceEEEEECCCCCEEEEEecCCeEE
Confidence            3778999999999 78999999999999999998776   55666666      67899999999999999999999999


Q ss_pred             EEECCCCe---EEEEeec-ccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGK---LVHSMVA-HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +||+++++   ....+.. |...+.+++|+|++++|++++.|
T Consensus       126 iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d  167 (377)
T 3dwl_C          126 VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD  167 (377)
T ss_dssp             ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred             EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence            99998876   3566666 88999999999999999999875

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.88  E-value=1.8e-20  Score=114.13  Aligned_cols=107  Identities=15%  Similarity=0.270  Sum_probs=94.5

Q ss_pred             CCCCceEEEEccCCCcEEEEe--eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTA--FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~   78 (116)
                      |.+.|.++.|+|.+...++++  +.|+.|++||+.+++....+..+       ..+..+.|+|++..+++++  .|+.|+
T Consensus       275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-------~~v~~~~~~~~~~~lv~~sg~~d~~I~  347 (420)
T 4gga_A          275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-------SQVCSILWSPHYKELISGHGFAQNQLV  347 (420)
T ss_dssp             CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-------SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred             cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-------cceeeeeecCCCCeEEEEEecCCCEEE
Confidence            667899999999766777654  57999999999999988888776       4688999999998877655  689999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +||+.+++.+..+.+|...|.+++|+|+|++|+|++.|
T Consensus       348 iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D  385 (420)
T 4gga_A          348 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD  385 (420)
T ss_dssp             EEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence            99999999999999999999999999999999999987

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.88  E-value=3.5e-22  Score=124.77  Aligned_cols=110  Identities=16%  Similarity=0.157  Sum_probs=95.0

Q ss_pred             CCCCCceEE--EEccCCC-cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          2 FYNGTPTSI--DFVRDES-TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~--~~~~~~~-~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .|.+.|.++  .|+| ++ ++|++++.|+.+++||+.+++.+..+.++..    ...+.+++|+|++..+++++.|+.|+
T Consensus       306 ~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~----~~~v~~v~fsp~~~~l~s~~~d~tv~  380 (524)
T 2j04_B          306 VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFR----GSNLVPVVYCPQIYSYIYSDGASSLR  380 (524)
T ss_dssp             CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECS----CCSCCCEEEETTTTEEEEECSSSEEE
T ss_pred             cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCcccccccccc----cCcccceEeCCCcCeEEEeCCCCcEE
Confidence            377889999  5677 66 8999999999999999988777666666521    12478999999999999999999999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +||++++..+..+.+|...|.+++|+|++++|++|+.|
T Consensus       381 lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D  418 (524)
T 2j04_B          381 AVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD  418 (524)
T ss_dssp             EEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred             EEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence            99999998888888899999999999999999999976

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.88  E-value=3.6e-20  Score=109.38  Aligned_cols=106  Identities=20%  Similarity=0.252  Sum_probs=91.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+| ++++|++++.|+.+++||+.+.+.+..+..+       ..+..+.++|++.+++ ++.|+.|++||
T Consensus       213 ~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~-~~~d~~i~iwd  283 (340)
T 4aow_A          213 GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-------DIINALCFSPNRYWLC-AATGPSIKIWD  283 (340)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECS-------SCEEEEEECSSSSEEE-EEETTEEEEEE
T ss_pred             CCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCC-------ceEEeeecCCCCceee-ccCCCEEEEEE
Confidence            3678899999999 8899999999999999999999888888766       4699999999886554 55699999999


Q ss_pred             CCCCeEEEEee---------cccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMV---------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++..+..+.         .|...|.+++|+|++++|++++.|
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D  327 (340)
T 4aow_A          284 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD  327 (340)
T ss_dssp             TTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred             CCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence            99887766553         467789999999999999999876

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=99.88  E-value=7.8e-21  Score=115.16  Aligned_cols=102  Identities=13%  Similarity=0.171  Sum_probs=92.7

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      ....|+| +++++++++.++.+++||+.+++....+..|      ...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus       101 ~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~  173 (420)
T 3vl1_A          101 AVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAH------VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN  173 (420)
T ss_dssp             EEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSS------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred             EEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccc------cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence            3446788 7899999999999999999988877777777      67899999999999999999999999999999999


Q ss_pred             EEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         88 VHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +..+..|...|.+++|+|++++|++++.|
T Consensus       174 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~d  202 (420)
T 3vl1_A          174 PRTLIGHRATVTDIAIIDRGRNVLSASLD  202 (420)
T ss_dssp             CEEEECCSSCEEEEEEETTTTEEEEEETT
T ss_pred             ceEEcCCCCcEEEEEEcCCCCEEEEEcCC
Confidence            88999999999999999999999999875

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=99.87  E-value=1.1e-20  Score=114.32  Aligned_cols=105  Identities=16%  Similarity=0.215  Sum_probs=94.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE--ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI--DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |.+.|.+++|+|++.+++++++.|+.|++||+.+++.+..+  ..|      ...+.+++|+|++..+++++.|+.|++|
T Consensus       130 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~iw  203 (402)
T 2aq5_A          130 HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVH------PDTIYSVDWSRDGALICTSCRDKRVRVI  203 (402)
T ss_dssp             CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTC------CSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred             CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCC------CCceEEEEECCCCCEEEEEecCCcEEEE
Confidence            77889999999943479999999999999999999888888  666      6789999999999999999999999999


Q ss_pred             ECCCCeEEEEe-eccccc-EEEEEECCCCcEEEee
Q psy17133         81 DNVSGKLVHSM-VAHLDA-VTSLAVDPQGLYILSG  113 (116)
Q Consensus        81 ~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~  113 (116)
                      |+++++.+..+ ..|... +..++|+|++++|+++
T Consensus       204 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g  238 (402)
T 2aq5_A          204 EPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG  238 (402)
T ss_dssp             ETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred             eCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence            99999998888 567664 8999999999999987

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.87  E-value=1.8e-20  Score=109.72  Aligned_cols=108  Identities=18%  Similarity=0.261  Sum_probs=91.4

Q ss_pred             CCCCceEEEEccCC-CcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCC-------------CC
Q psy17133          3 YNGTPTSIDFVRDE-STKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPT-------------LP   66 (116)
Q Consensus         3 ~~~~v~~~~~~~~~-~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~   66 (116)
                      |...|.+++|+|++ +.++++++.|+.|++||+.++.  ....+.+|      ...+.+++|+|+             ++
T Consensus        98 h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~~~~~~~~~~~~  171 (297)
T 2pm7_B           98 HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH------AIGVNSASWAPATIEEDGEHNGTKESR  171 (297)
T ss_dssp             CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC------SSCEEEEEECCCC------------CC
T ss_pred             CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc------cCccceEeecCCcccccccCCCCCCcc
Confidence            67789999999942 7899999999999999998653  23556677      678999999997             46


Q ss_pred             EEEEEeCCCeEEEEECCCCe----EEEEeecccccEEEEEECCCC---cEEEeeecC
Q psy17133         67 LTITAHDDRHIRFFDNVSGK----LVHSMVAHLDAVTSLAVDPQG---LYILSGTYQ  116 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~---~~l~~~s~d  116 (116)
                      .+++++.|+.|++||+.+++    ....+.+|...|.+++|+|++   ++|++++.|
T Consensus       172 ~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D  228 (297)
T 2pm7_B          172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD  228 (297)
T ss_dssp             EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred             eEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence            99999999999999998765    556778899999999999984   899999876

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.87  E-value=1.8e-20  Score=125.56  Aligned_cols=108  Identities=17%  Similarity=0.284  Sum_probs=100.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|++++|+| +++++++++.++.|++||..+++.+..+.+|      ...|.+++|+|+++++++++.|+.|++||
T Consensus       613 ~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          613 PHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKLLDIKAH------EDEVLCCAFSSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEEEEeccC------CCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            3788999999999 8899999999999999999999999999988      67899999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECC--CCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDP--QGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~s~d  116 (116)
                      +.+++.+..+..|...+.+++|+|  ++.++++++.|
T Consensus       686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d  722 (1249)
T 3sfz_A          686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND  722 (1249)
T ss_dssp             TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT
T ss_pred             CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC
Confidence            999999999999999999999999  55688888765

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.87  E-value=5e-20  Score=110.68  Aligned_cols=105  Identities=14%  Similarity=0.233  Sum_probs=93.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~   81 (116)
                      +...|.+++|+| +++++++++.++.|++||+ +++.+..+..|      ...+.+++|+|+++ ++++++.|+.|++||
T Consensus       162 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h------~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd  233 (383)
T 3ei3_B          162 WDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLH------KAKVTHAEFNPRCDWLMATSSVDATVKLWD  233 (383)
T ss_dssp             SSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECS------SSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred             CCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccC------CCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence            346799999999 8899999999999999999 47788888888      67899999999998 999999999999999


Q ss_pred             CCC----CeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         82 NVS----GKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +.+    +..+..+ .|...+.+++|+| ++++|++++.|
T Consensus       234 ~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d  272 (383)
T 3ei3_B          234 LRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR  272 (383)
T ss_dssp             GGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred             CCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence            987    6666666 5888999999999 99999999865

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=99.87  E-value=1.2e-20  Score=115.35  Aligned_cols=110  Identities=14%  Similarity=0.141  Sum_probs=90.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+|.++++|++++.|+.|++||+.++........+..    ...+.+++++|++.++++++.|+.|++||
T Consensus       162 gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~g~~dg~i~~wd  237 (435)
T 4e54_B          162 GAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTI----NIWFCSLDVSASSRMVVTGDNVGNVILLN  237 (435)
T ss_dssp             SSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSC----SCCCCCEEEETTTTEEEEECSSSBEEEEE
T ss_pred             CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCC----CccEEEEEECCCCCEEEEEeCCCcEeeec
Confidence            47899999999986789999999999999999986543333333321    34578899999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ++ ++.+..+..|...|.+++|+|+++ +|++++.|
T Consensus       238 ~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d  272 (435)
T 4e54_B          238 MD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD  272 (435)
T ss_dssp             SS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred             cC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence            87 555667778999999999999876 67788765

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=99.87  E-value=1e-19  Score=107.13  Aligned_cols=106  Identities=14%  Similarity=0.153  Sum_probs=96.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++.|+| +++.+++++.++.+++||+.+++.+..+..+      ...+.+++|+|+++.+++++.|+.|++||+
T Consensus       140 ~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~  212 (337)
T 1gxr_A          140 SAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH------TDGASCIDISNDGTKLWTGGLDNTVRSWDL  212 (337)
T ss_dssp             SSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecc------cCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence            567789999999 8899999999999999999999888888887      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.+..+. +...+.+++|+|+++++++++.|
T Consensus       213 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~  245 (337)
T 1gxr_A          213 REGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMES  245 (337)
T ss_dssp             TTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETT
T ss_pred             CCCceEeeec-CCCceEEEEECCCCCEEEEEcCC
Confidence            9998887775 66789999999999999998754

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.87  E-value=6.4e-20  Score=107.17  Aligned_cols=104  Identities=15%  Similarity=0.234  Sum_probs=93.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++.|+| ++. +++++.++.+++||+.+++.+..+..+      ...+.+++|+|++ .+++++.|+.|++||+
T Consensus       183 ~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~  253 (313)
T 3odt_A          183 HNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYEGH------ESFVYCIKLLPNG-DIVSCGEDRTVRIWSK  253 (313)
T ss_dssp             CSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred             CcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhhcC------CceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence            678899999999 656 889999999999999999999999888      6789999999999 5889999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..+...+.+++|+|+++++ +++.|
T Consensus       254 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~d  286 (313)
T 3odt_A          254 ENGSLKQVITLPAISIWSVDCMSNGDII-VGSSD  286 (313)
T ss_dssp             TTCCEEEEEECSSSCEEEEEECTTSCEE-EEETT
T ss_pred             CCCceeEEEeccCceEEEEEEccCCCEE-EEeCC
Confidence            9999999999888899999999999854 56554

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.87  E-value=5.2e-20  Score=111.19  Aligned_cols=106  Identities=10%  Similarity=0.094  Sum_probs=98.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| +++++++++.++.+++||+.+++.+..+..+      ...+.+++|+|++ .+++++.|+.|++||+
T Consensus       246 ~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~  317 (425)
T 1r5m_A          246 HHGPISVLEFND-TNKLLLSASDDGTLRIWHGGNGNSQNCFYGH------SQSIVSASWVGDD-KVISCSMDGSVRLWSL  317 (425)
T ss_dssp             CSSCEEEEEEET-TTTEEEEEETTSCEEEECSSSBSCSEEECCC------SSCEEEEEEETTT-EEEEEETTSEEEEEET
T ss_pred             CCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCccceEecCC------CccEEEEEECCCC-EEEEEeCCCcEEEEEC
Confidence            678899999999 7889999999999999999988888888877      6789999999999 9999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..|...+.+++|+|++++|++++.|
T Consensus       318 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  351 (425)
T 1r5m_A          318 KQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD  351 (425)
T ss_dssp             TTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred             CCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence            9999999998888999999999999999998865

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.6e-20  Score=117.40  Aligned_cols=107  Identities=13%  Similarity=0.116  Sum_probs=85.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.+++|+| ++..|++++.++.+++|+...  .+..+. +.... ....+.+++|+|+|+++++++.||+|++|++
T Consensus        84 ~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~-~~~sv~svafSPDG~~LAsgs~DGtVkIWd~  158 (588)
T 2j04_A           84 PVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNL-SSRTYHCFEWNPIESSIVVGNEDGELQFFSI  158 (588)
T ss_dssp             CSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCS-TTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred             CCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCcc-ccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence            467899999999 889999999999999999643  555555 42100 0125999999999999999999999999999


Q ss_pred             CCCe-------EEEEe----ecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGK-------LVHSM----VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~-------~~~~~----~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++.       .+..+    .+|...|.+++|+|+|  +++++.|
T Consensus       159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D  201 (588)
T 2j04_A          159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN  201 (588)
T ss_dssp             CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT
T ss_pred             CCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC
Confidence            8875       35665    4567899999999999  6666654

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.86  E-value=2.4e-20  Score=122.53  Aligned_cols=107  Identities=16%  Similarity=0.238  Sum_probs=90.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-------------------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-------------------------------------------   38 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-------------------------------------------   38 (116)
                      .|...|.+++|+| ++++|++++.|+.|++|++.+++                                           
T Consensus       486 ~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  564 (902)
T 2oaj_A          486 AKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQG  564 (902)
T ss_dssp             SSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEE
T ss_pred             CCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCc
Confidence            4677899999999 88999999999999999987652                                           


Q ss_pred             --eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE-----ee-cccccEEEEEEC-----C
Q psy17133         39 --PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS-----MV-AHLDAVTSLAVD-----P  105 (116)
Q Consensus        39 --~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~-----~~-~~~~~v~~~~~~-----~  105 (116)
                        ++..+.+|      .+.|++++|+|+| ++++++.|++|++||++++..+..     +. +|...|++++|+     |
T Consensus       565 ~~~~~~l~~h------~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~  637 (902)
T 2oaj_A          565 FMPSTAVHAN------KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD  637 (902)
T ss_dssp             EEEEEEECCC------SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT
T ss_pred             cceeEEEEcC------CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCC
Confidence              24455566      7789999999999 999999999999999988776642     22 677889999999     8


Q ss_pred             CC---cEEEeeecC
Q psy17133        106 QG---LYILSGTYQ  116 (116)
Q Consensus       106 ~~---~~l~~~s~d  116 (116)
                      ||   ++|++++.|
T Consensus       638 Dg~~~~~l~sgs~D  651 (902)
T 2oaj_A          638 DGYSSILMVCGTDM  651 (902)
T ss_dssp             SSSEEEEEEEEETT
T ss_pred             CCCcceEEEEEecC
Confidence            85   899999876

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=99.86  E-value=6.1e-20  Score=110.47  Aligned_cols=109  Identities=24%  Similarity=0.327  Sum_probs=96.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEec---CCcCcCCCCceeEEEEcCCCCEEEEEeCC---Ce
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS---SQFGVSGGGGINRVVCHPTLPLTITAHDD---RH   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~   76 (116)
                      |...|.+++|+| ++ .+++++.++.+++||+.+++.+..+..   |...   ...+.+++|+|++.++++++.|   +.
T Consensus       185 ~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~---~~~i~~i~~~~~~~~l~~~~~d~~~g~  259 (397)
T 1sq9_A          185 PSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINN---SNSIRSVKFSPQGSLLAIAHDSNSFGC  259 (397)
T ss_dssp             SCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CC---CCCEEEEEECSSTTEEEEEEEETTEEE
T ss_pred             CCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEecccccccc---CCccceEEECCCCCEEEEEecCCCCce
Confidence            577899999999 67 999999999999999999988888887   4000   2579999999999999999999   99


Q ss_pred             EEEEECCCCeEEEEeec-------------ccccEEEEEECCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVA-------------HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++||+.+++.+..+..             |...+.+++|+|++++|++++.|
T Consensus       260 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  312 (397)
T 1sq9_A          260 ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD  312 (397)
T ss_dssp             EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred             EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence            99999999999998887             88999999999999999999875

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=99.86  E-value=6e-20  Score=123.11  Aligned_cols=108  Identities=17%  Similarity=0.200  Sum_probs=100.3

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC--CCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP--TLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~d~~i~~   79 (116)
                      .|.+.|.+++|+| +++++++++.|+.|++||+.+++.+..+.+|      ...+.+++|+|  ++.++++++.|+.|++
T Consensus       655 ~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~sg~~d~~v~v  727 (1249)
T 3sfz_A          655 AHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLVHTYDEH------SEQVNCCHFTNKSNHLLLATGSNDFFLKL  727 (1249)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred             cCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceEEEEcCC------CCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence            3788999999999 8899999999999999999999999999988      67899999999  4568999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+.+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d  764 (1249)
T 3sfz_A          728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD  764 (1249)
T ss_dssp             EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred             EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence            9999999999999999999999999999999999875

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.8e-19  Score=107.13  Aligned_cols=106  Identities=18%  Similarity=0.318  Sum_probs=97.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-------   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-------   75 (116)
                      |.+.|.++.|+| +++++++++.++.+++||+.+++.+..+...       ..+..++|+|+++.+++++.++       
T Consensus       217 ~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  288 (369)
T 3zwl_B          217 HEKSISDMQFSP-DLTYFITSSRDTNSFLVDVSTLQVLKKYETD-------CPLNTAVITPLKEFIILGGGQEAKDVTTT  288 (369)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECS-------SCEEEEEECSSSSEEEEEECCC-------
T ss_pred             CCCceeEEEECC-CCCEEEEecCCceEEEEECCCCceeeeecCC-------CCceeEEecCCCceEEEeecCCCceEEEE
Confidence            678899999999 8899999999999999999999888888743       5799999999999999999887       


Q ss_pred             -------eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         76 -------HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 -------~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                             .+++||..+++.+..+..|...|.+++|+|++++|++++.|
T Consensus       289 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d  336 (369)
T 3zwl_B          289 SANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED  336 (369)
T ss_dssp             ------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence                   89999999999999999999999999999999999999876

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.86  E-value=4.7e-20  Score=110.34  Aligned_cols=108  Identities=10%  Similarity=0.065  Sum_probs=88.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCe-EEEEECCCCceeEEEe-c-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSA-CVLFDLETGKPVVRID-S-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~-~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      .|.+.|.+++|+| ++++|++++.|+. |++||+.+++.+..+. + |      ...|.+++|+|+++++++++.|+.|+
T Consensus       193 ~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h------~~~v~~~~~s~~~~~l~s~s~d~~v~  265 (355)
T 3vu4_A          193 AHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD------RADVVDMKWSTDGSKLAVVSDKWTLH  265 (355)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC------CSCEEEEEECTTSCEEEEEETTCEEE
T ss_pred             ccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC------CCcEEEEEECCCCCEEEEEECCCEEE
Confidence            3778999999999 8899999999998 9999999999999998 5 6      67899999999999999999999999


Q ss_pred             EEECCCCeEE--EEe--------------------e-cccccEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLV--HSM--------------------V-AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~--~~~--------------------~-~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +||++.+...  ..+                    . ........++|+++++.+++++.|
T Consensus       266 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d  326 (355)
T 3vu4_A          266 VFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT  326 (355)
T ss_dssp             EEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred             EEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence            9999754211  111                    0 011123568999999999988754

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=99.86  E-value=3.1e-20  Score=120.06  Aligned_cols=107  Identities=20%  Similarity=0.338  Sum_probs=98.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.++.|+| ++++|++++.++.|++|++.+++.+..+.+|      ...+.+++|+|+++.+++++.|+.|++|++
T Consensus        54 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~  126 (814)
T 3mkq_A           54 TETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH------PDYIRSIAVHPTKPYVLSGSDDLTVKLWNW  126 (814)
T ss_dssp             CSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred             CCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecC------CCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence            678899999999 8899999999999999999999999999888      678999999999999999999999999999


Q ss_pred             CCC-eEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      .++ .....+..|...+.+++|+| +++.|++++.|
T Consensus       127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d  162 (814)
T 3mkq_A          127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD  162 (814)
T ss_dssp             GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred             CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence            887 66777888999999999999 88899998865

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=99.86  E-value=5.8e-20  Score=109.64  Aligned_cols=104  Identities=14%  Similarity=0.147  Sum_probs=94.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC------------------CCceeEEEecCCcCcCCCCceeEEEEcCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE------------------TGKPVVRIDSSQFGVSGGGGINRVVCHPT   64 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~   64 (116)
                      |.+.|.++.|+| +++++++++.++.+++||+.                  .++.+..+..+      ...+.+++|+|+
T Consensus       141 ~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~  213 (372)
T 1k8k_C          141 IRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS------CGWVHGVCFSAN  213 (372)
T ss_dssp             CCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC------SSCEEEEEECSS
T ss_pred             cCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCC------CCeEEEEEECCC
Confidence            577899999999 78999999999999999953                  56777777777      678999999999


Q ss_pred             CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         65 LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +..+++++.|+.|++||+++++.+..+..|...+.+++|+|++++++++
T Consensus       214 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  262 (372)
T 1k8k_C          214 GSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG  262 (372)
T ss_dssp             SSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence            9999999999999999999999999999888899999999999998877

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.86  E-value=4e-20  Score=108.95  Aligned_cols=113  Identities=18%  Similarity=0.160  Sum_probs=89.4

Q ss_pred             CCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCCceeEEEec-----------------------------------
Q psy17133          3 YNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETGKPVVRIDS-----------------------------------   45 (116)
Q Consensus         3 ~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-----------------------------------   45 (116)
                      |.+.|.+++|+| +  ++++++++.++.|++||+.+++.+..+..                                   
T Consensus       109 ~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~  187 (351)
T 3f3f_A          109 SKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAV  187 (351)
T ss_dssp             CSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEE
T ss_pred             cCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEE
Confidence            677899999999 6  78999999999999999875542111100                                   


Q ss_pred             -------------------CCcCcCCCCceeEEEEcCCC----CEEEEEeCCCeEEEEECCCC-----------------
Q psy17133         46 -------------------SQFGVSGGGGINRVVCHPTL----PLTITAHDDRHIRFFDNVSG-----------------   85 (116)
Q Consensus        46 -------------------~~~~~~~~~~i~~~~~~~~~----~~~~~~~~d~~i~~~~~~~~-----------------   85 (116)
                                         ......|...|.+++|+|++    .++++++.|+.|++||+.++                 
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  267 (351)
T 3f3f_A          188 SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFD  267 (351)
T ss_dssp             EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------------
T ss_pred             ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccC
Confidence                               00001346789999999998    79999999999999998764                 


Q ss_pred             -----------------------------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         86 -----------------------------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        86 -----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                                                   +.+..+.+|...|.+++|+|++++|++++.|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d  327 (351)
T 3f3f_A          268 NSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD  327 (351)
T ss_dssp             -----------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred             CCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence                                         5666677888999999999999999999876

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=99.86  E-value=4.6e-20  Score=111.45  Aligned_cols=106  Identities=15%  Similarity=0.060  Sum_probs=96.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++.|+| ++ .+++++.++.+++||+.+++.+..+..+      ...+.+++|+|+++++++++.|+.|++|++
T Consensus       288 ~~~~i~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~  359 (425)
T 1r5m_A          288 HSQSIVSASWVG-DD-KVISCSMDGSVRLWSLKQNTLLALSIVD------GVPIFAGRISQDGQKYAVAFMDGQVNVYDL  359 (425)
T ss_dssp             CSSCEEEEEEET-TT-EEEEEETTSEEEEEETTTTEEEEEEECT------TCCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred             CCccEEEEEECC-CC-EEEEEeCCCcEEEEECCCCcEeEecccC------CccEEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence            678899999999 66 9999999999999999999988888887      568999999999999999999999999999


Q ss_pred             CCCe--------------------EEEEeecccc--cEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGK--------------------LVHSMVAHLD--AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~--------------------~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++                    .+..+..|..  .|.+++|+|++++|++++.|
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d  415 (425)
T 1r5m_A          360 KKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL  415 (425)
T ss_dssp             HHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS
T ss_pred             CCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC
Confidence            9887                    7888888865  89999999999999998875

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.86  E-value=5e-21  Score=117.34  Aligned_cols=106  Identities=18%  Similarity=0.215  Sum_probs=88.7

Q ss_pred             CCCceEEEEccCCCcEEE----EeeCCCeEEEEECCCC--------ce---eEEEecCCcCcCCCCceeEEEEcCC-CCE
Q psy17133          4 NGTPTSIDFVRDESTKMV----TAFDNSACVLFDLETG--------KP---VVRIDSSQFGVSGGGGINRVVCHPT-LPL   67 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~----~~~~~~~v~i~~~~~~--------~~---~~~~~~~~~~~~~~~~i~~~~~~~~-~~~   67 (116)
                      .+.|.+++|+| ++++|+    +++.++.|++||+.++        +.   ...+.+|      ...|.+++|+|+ +.+
T Consensus        92 ~~~v~~l~~sp-dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h------~~~V~~v~~~p~~~~~  164 (434)
T 2oit_A           92 KFPIHHLALSC-DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDA------GGMVIDMKWNPTVPSM  164 (434)
T ss_dssp             SSCEEEEEECT-TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSG------GGSEEEEEECSSCTTE
T ss_pred             CCcccEEEEcC-CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCC------CCceEEEEECCCCCCE
Confidence            45699999999 788888    7888999999998654        22   2333445      678999999998 789


Q ss_pred             EEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         68 TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        68 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.|+.|++||++++........|...+.+++|+|+|++|++++.|
T Consensus       165 las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d  213 (434)
T 2oit_A          165 VAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN  213 (434)
T ss_dssp             EEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT
T ss_pred             EEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC
Confidence            9999999999999999887766666788899999999999999999875

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.5e-20  Score=113.64  Aligned_cols=107  Identities=13%  Similarity=0.236  Sum_probs=95.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCC---eEEEEECCCC-ceeEEEe-cCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNS---ACVLFDLETG-KPVVRID-SSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHI   77 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~---~v~i~~~~~~-~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i   77 (116)
                      ...+.+++|+|++..++++++.++   .|++||+.++ +.+..+. +|      ...+.+++|+| ++.++++++.|+.|
T Consensus       214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~~l~s~~~dg~v  287 (416)
T 2pm9_A          214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH------QKGILSLDWCHQDEHLLLSSGRDNTV  287 (416)
T ss_dssp             CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC------SSCEEEEEECSSCSSCEEEEESSSEE
T ss_pred             CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc------cCceeEEEeCCCCCCeEEEEeCCCCE
Confidence            678999999995457899999888   9999999976 5666666 66      67899999999 89999999999999


Q ss_pred             EEEECCCCeEEEEeecccccEEEEEECCCC-cEEEeeecC
Q psy17133         78 RFFDNVSGKLVHSMVAHLDAVTSLAVDPQG-LYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d  116 (116)
                      ++||+++++.+..+..|...+.+++|+|++ ++|++++.|
T Consensus       288 ~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d  327 (416)
T 2pm9_A          288 LLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD  327 (416)
T ss_dssp             EEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS
T ss_pred             EEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC
Confidence            999999999999999999999999999998 899998865

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=99.86  E-value=1.6e-19  Score=108.54  Aligned_cols=110  Identities=11%  Similarity=0.047  Sum_probs=94.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+|++++.+++++.++.|++||+.+ +.+..+..+..   +...+.+++|+|+++.+++++.|+.|++||
T Consensus       116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d  191 (383)
T 3ei3_B          116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS---WDYWYCCVDVSVSRQMLATGDSTGRLLLLG  191 (383)
T ss_dssp             STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCC---SSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred             CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCC---CCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence            37889999999996578999999999999999985 55666655421   146799999999999999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      + +++.+..+..|...|.+++|+|+++ +|++++.|
T Consensus       192 ~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  226 (383)
T 3ei3_B          192 L-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD  226 (383)
T ss_dssp             T-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred             C-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence            9 5778888888999999999999999 89998875

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.86  E-value=2e-19  Score=108.93  Aligned_cols=105  Identities=13%  Similarity=0.209  Sum_probs=95.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| +++++++++.++.+++||+.+++.+..+.+|      ...+.+++|  ++..+++++.|+.|++||+
T Consensus       133 ~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~~~~dg~i~i~d~  203 (401)
T 4aez_A          133 ESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAGH------QARVGCLSW--NRHVLSSGSRSGAIHHHDV  203 (401)
T ss_dssp             TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred             CCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecCC------CCceEEEEE--CCCEEEEEcCCCCEEEEec
Confidence            678899999999 8899999999999999999999999999888      678999999  4679999999999999999


Q ss_pred             C-CCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 V-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      + .......+..|...+.+++|+|++++|++++.|
T Consensus       204 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d  238 (401)
T 4aez_A          204 RIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND  238 (401)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence            8 566677888899999999999999999999875

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.85  E-value=3e-20  Score=120.11  Aligned_cols=108  Identities=16%  Similarity=0.201  Sum_probs=95.8

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+| +++++++++.++.|++|++.  +++.+..+.+|      ...|.+++|+|+  +..+++++.|+.|
T Consensus         7 gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h------~~~V~~l~~s~~~~~~~l~s~s~Dg~I   79 (753)
T 3jro_A            7 AHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHPKFGTILASCSYDGKV   79 (753)
T ss_dssp             -CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCC------SSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred             cCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCC------cCceEEEEecCCCCCCEEEEEeCCCeE
Confidence            4789999999999 78999999999999999997  44566777777      678999999988  8999999999999


Q ss_pred             EEEECCCCe--EEEEeecccccEEEEEECCC--CcEEEeeecC
Q psy17133         78 RFFDNVSGK--LVHSMVAHLDAVTSLAVDPQ--GLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d  116 (116)
                      ++||+.+++  ....+..|...|.+++|+|+  ++.+++++.|
T Consensus        80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d  122 (753)
T 3jro_A           80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD  122 (753)
T ss_dssp             EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred             EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence            999999887  56667788999999999999  9999999875

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=99.85  E-value=1.1e-19  Score=114.35  Aligned_cols=107  Identities=10%  Similarity=0.157  Sum_probs=95.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCc-eeEEEEcC--CCCEEEEEeCC
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGG-INRVVCHP--TLPLTITAHDD   74 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~-i~~~~~~~--~~~~~~~~~~d   74 (116)
                      .|.+.|.+++|+| +++++++++ ++.+.+|++.++    +....+.+|      ... |.+++|+|  +++++++++.|
T Consensus        16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h------~~~~v~~~~~sp~~~~~~l~s~~~d   87 (615)
T 1pgu_A           16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGH------GSSVVTTVKFSPIKGSQYLCSGDES   87 (615)
T ss_dssp             CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTT------TTSCEEEEEECSSTTCCEEEEEETT
T ss_pred             CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecC------CCceEEEEEECcCCCCCEEEEecCC
Confidence            3678899999999 889998888 789999999988    888899888      678 99999999  99999999999


Q ss_pred             CeEEEEECCCC--------eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSG--------KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|++|++.++        +.+..+..|...+.+++|+|++++|++++.|
T Consensus        88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~  137 (615)
T 1pgu_A           88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG  137 (615)
T ss_dssp             SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred             CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence            99999999754        6667777888999999999999999988753

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=2.3e-20  Score=111.07  Aligned_cols=105  Identities=10%  Similarity=0.036  Sum_probs=85.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-EEEec-CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-VRIDS-SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      +...+.+++|+| ++.++++|+.|+.|++||+.+++.+ ..+.. |      ...|.+++|+|++.++++++.+ .|++|
T Consensus       169 ~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h------~~~v~~l~fs~~g~~l~s~~~~-~v~iw  240 (343)
T 3lrv_A          169 SDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFPVDE------EAKIKEVKFADNGYWMVVECDQ-TVVCF  240 (343)
T ss_dssp             SSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECCCCT------TSCEEEEEECTTSSEEEEEESS-BEEEE
T ss_pred             CCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEeccC------CCCEEEEEEeCCCCEEEEEeCC-eEEEE
Confidence            345799999999 8899999999999999999988877 77877 6      6789999999999999999955 99999


Q ss_pred             ECCCCeEEEEeec---ccccE--EEEEECCCCcEEEeeec
Q psy17133         81 DNVSGKLVHSMVA---HLDAV--TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        81 ~~~~~~~~~~~~~---~~~~v--~~~~~~~~~~~l~~~s~  115 (116)
                      |+++++....+..   +...+  .+++|+|++++|++++.
T Consensus       241 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~  280 (343)
T 3lrv_A          241 DLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN  280 (343)
T ss_dssp             ETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred             EcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence            9998766544332   22333  36999999999999764

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.85  E-value=2.7e-19  Score=109.29  Aligned_cols=109  Identities=15%  Similarity=0.220  Sum_probs=94.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+|+++..+++++.++.|++||+.++   +.+..+..+      ...+.+++|+|+++ ++++++.|+.|
T Consensus       229 ~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~------~~~v~~i~~~p~~~~~l~tg~~dg~v  302 (430)
T 2xyi_A          229 GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH------TAEVNCLSFNPYSEFILATGSADKTV  302 (430)
T ss_dssp             CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC------SSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred             CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC------CCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence            467889999999977789999999999999999876   566777777      67899999999987 78899999999


Q ss_pred             EEEECCC-CeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         78 RFFDNVS-GKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        78 ~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ++||+++ +..+..+..|...+.+++|+|+++ +|++++.|
T Consensus       303 ~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d  343 (430)
T 2xyi_A          303 ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTD  343 (430)
T ss_dssp             EEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT
T ss_pred             EEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC
Confidence            9999987 566777888999999999999985 67888765

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=99.85  E-value=2e-20  Score=110.41  Aligned_cols=108  Identities=7%  Similarity=0.049  Sum_probs=87.5

Q ss_pred             CCCCceEEEEccCC----------------CcEEEEeeCCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcC
Q psy17133          3 YNGTPTSIDFVRDE----------------STKMVTAFDNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHP   63 (116)
Q Consensus         3 ~~~~v~~~~~~~~~----------------~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~   63 (116)
                      |...+.++.|+|+.                +.+|++++.|+.|++||....   +.+..+.+|      ...|.+++|+|
T Consensus       149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h------~~~V~~v~~sp  222 (316)
T 3bg1_A          149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAH------SDWVRDVAWAP  222 (316)
T ss_dssp             SSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCC------SSCEEEEECCC
T ss_pred             ccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccC------CCceEEEEecC
Confidence            56678889999831                368999999999999999754   345566777      67899999999


Q ss_pred             CC----CEEEEEeCCCeEEEEECCCC---e-EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         64 TL----PLTITAHDDRHIRFFDNVSG---K-LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        64 ~~----~~~~~~~~d~~i~~~~~~~~---~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++    ..+++++.|+.|++|++.+.   + ....+..|...|.+++|+|++++|++++.|
T Consensus       223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D  283 (316)
T 3bg1_A          223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGD  283 (316)
T ss_dssp             CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESS
T ss_pred             CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence            86    78999999999999998762   1 122345577899999999999999999876

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.85  E-value=7.5e-20  Score=111.53  Aligned_cols=110  Identities=15%  Similarity=0.173  Sum_probs=87.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-----------eeEEEecCCcC------cCCCCceeEEEEcCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-----------PVVRIDSSQFG------VSGGGGINRVVCHPTL   65 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-----------~~~~~~~~~~~------~~~~~~i~~~~~~~~~   65 (116)
                      +.+.|.+++|+| ++++|++++.++.|++|++.+++           ....+.+|...      ......|.+++|+|++
T Consensus        27 ~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           27 EADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             GGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             ccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            467899999999 88999999999999999998766           46677777210      0000679999999998


Q ss_pred             --CEEEEEeCCCeEEEEECCCCeEE---------------------------------------EE-eecccccEEEEEE
Q psy17133         66 --PLTITAHDDRHIRFFDNVSGKLV---------------------------------------HS-MVAHLDAVTSLAV  103 (116)
Q Consensus        66 --~~~~~~~~d~~i~~~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~  103 (116)
                        ..+++++.|+.|++|++.++...                                       .. ..+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              79999999999999998764432                                       12 2468889999999


Q ss_pred             CCCCcEEEee
Q psy17133        104 DPQGLYILSG  113 (116)
Q Consensus       104 ~~~~~~l~~~  113 (116)
                      +|++++|+++
T Consensus       186 ~~~~~~l~s~  195 (447)
T 3dw8_B          186 NSDYETYLSA  195 (447)
T ss_dssp             CTTSSEEEEE
T ss_pred             cCCCCEEEEe
Confidence            9999999987

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.84  E-value=2.3e-19  Score=106.09  Aligned_cols=112  Identities=11%  Similarity=0.076  Sum_probs=95.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC------ceeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEeC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG------KPVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAHD   73 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~------~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~   73 (116)
                      +...+.++.|+|.+++.+++++.++.+++|++...      +....+..+...   ..|...+.+++|+|+++++++++.
T Consensus       192 ~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  271 (342)
T 1yfq_A          192 LKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS  271 (342)
T ss_dssp             CSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET
T ss_pred             CCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC
Confidence            56678999999823588999999999999999876      677788777320   112338999999999999999999


Q ss_pred             CCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEeeecC
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+.|++||+.+++.+..+..| ...|.+++  |++++|++++.|
T Consensus       272 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D  313 (342)
T 1yfq_A          272 DGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD  313 (342)
T ss_dssp             TSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred             CceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence            999999999999999999888 89999999  999999999876

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=99.84  E-value=1.6e-19  Score=107.38  Aligned_cols=114  Identities=14%  Similarity=0.160  Sum_probs=94.3

Q ss_pred             CCCCCceEEEEccC---CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC----CCEEEEEeCC
Q psy17133          2 FYNGTPTSIDFVRD---ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT----LPLTITAHDD   74 (116)
Q Consensus         2 ~~~~~v~~~~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~d   74 (116)
                      .|.+.|.+++|+|+   +...+++++.++.|++|+..+++.+..+..+.. ..+...+.+++|+|+    +.++++++.|
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~l~~~~~d   94 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVD-ADADENFYTCAWTYDSNTSHPLLAVAGSR   94 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEEC-SCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccc-cCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence            37889999999983   345566666677999999998877766654321 012467999999998    6699999999


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +.|++||+.+++.+..+..|...|.+++|+| ++++|++++.|
T Consensus        95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d  137 (366)
T 3k26_A           95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD  137 (366)
T ss_dssp             CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT
T ss_pred             CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC
Confidence            9999999999999999999999999999999 99999999875

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=99.84  E-value=2.3e-19  Score=117.92  Aligned_cols=104  Identities=12%  Similarity=0.155  Sum_probs=91.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| ++++|++|+.|+.|++|+....+....+. +      ...|.+++|+| ++++++++.|+.|++||+
T Consensus        16 h~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~------~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~   86 (902)
T 2oaj_A           16 MSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEVVIKLE-D------RSAIKEMRFVK-GIYLVVINAKDTVYVLSL   86 (902)
T ss_dssp             CSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEEEEECS-S------CCCEEEEEEET-TTEEEEEETTCEEEEEET
T ss_pred             CCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEEEEEcC-C------CCCEEEEEEcC-CCEEEEEECcCeEEEEEC
Confidence            678999999999 88999999999999999988666544433 3      46799999999 889999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.+..+. +...|.+++|+|++++|++|+.|
T Consensus        87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~d  119 (902)
T 2oaj_A           87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQN  119 (902)
T ss_dssp             TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETT
T ss_pred             CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCC
Confidence            9999888886 66789999999999999999865

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.84  E-value=2.9e-19  Score=106.92  Aligned_cols=88  Identities=18%  Similarity=0.196  Sum_probs=77.3

Q ss_pred             eeCCCeEEEEECCCCc---------------e-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe-EEEEECCCC
Q psy17133         23 AFDNSACVLFDLETGK---------------P-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH-IRFFDNVSG   85 (116)
Q Consensus        23 ~~~~~~v~i~~~~~~~---------------~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~-i~~~~~~~~   85 (116)
                      ++.++.|++||+.+++               + +..+.+|      ...|.+++|+|+++++++++.|++ |++||++++
T Consensus       155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h------~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~  228 (355)
T 3vu4_A          155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH------TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG  228 (355)
T ss_dssp             SSCTTCEEEEECCC------------------CCEEECCC------SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC
T ss_pred             CCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc------CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence            5788999999998654               1 5677777      678999999999999999999998 999999999


Q ss_pred             eEEEEee-c-ccccEEEEEECCCCcEEEeeecC
Q psy17133         86 KLVHSMV-A-HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        86 ~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+..+. + |...|.+++|+|++++|++++.|
T Consensus       229 ~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d  261 (355)
T 3vu4_A          229 VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK  261 (355)
T ss_dssp             CEEEEEECTTCCSCEEEEEECTTSCEEEEEETT
T ss_pred             cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC
Confidence            9999988 5 88999999999999999999876

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.84  E-value=3.5e-19  Score=108.82  Aligned_cols=108  Identities=16%  Similarity=0.200  Sum_probs=92.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~   80 (116)
                      |.+.|.+++|+|++..++++++.++.|++||+.. .+.+..+..|      ...+.+++|+|+++ ++++++.|+.|++|
T Consensus       276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h------~~~v~~i~~sp~~~~~l~s~~~d~~i~iw  349 (430)
T 2xyi_A          276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH------KDEIFQVQWSPHNETILASSGTDRRLHVW  349 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC------SSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred             CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC------CCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence            6788999999994444788999999999999987 5678888887      67899999999985 78999999999999


Q ss_pred             ECCC--------------CeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         81 DNVS--------------GKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        81 ~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      |+..              .+.+....+|...|..++|+|+++ +|++++.|
T Consensus       350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d  400 (430)
T 2xyi_A          350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED  400 (430)
T ss_dssp             EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC
Confidence            9976              356677778888999999999999 88888765

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=99.84  E-value=1.6e-19  Score=106.75  Aligned_cols=106  Identities=4%  Similarity=-0.025  Sum_probs=92.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHI   77 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i   77 (116)
                      .|.+.|.+++|+| +++++++++.++.|++|++.+++   ....+..+      ...+.+++|+|++. .+++++.|+.|
T Consensus         9 ~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg~i   81 (342)
T 1yfq_A            9 APKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY------KHPLLCCNFIDNTDLQIYVGTVQGEI   81 (342)
T ss_dssp             CCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC------SSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred             CCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeec------CCceEEEEECCCCCcEEEEEcCCCeE
Confidence            4788999999999 78999999999999999998776   24444555      57899999999999 99999999999


Q ss_pred             EEEEC-CCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133         78 RFFDN-VSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        78 ~~~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++|++ .+++. ..+..  |...|.+++|+| +++|++++.|
T Consensus        82 ~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d  121 (342)
T 1yfq_A           82 LKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWD  121 (342)
T ss_dssp             EEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETT
T ss_pred             EEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCC
Confidence            99999 87765 66777  889999999999 9999998875

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=99.84  E-value=1.6e-19  Score=110.10  Aligned_cols=111  Identities=17%  Similarity=0.192  Sum_probs=87.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-CceeEEEecCC-cCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-GKPVVRIDSSQ-FGVSGGGGINRVVCHPTL-PLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~   79 (116)
                      |...|.+++|+| ++++++++ .|+.|++||+.. ++....+.... ....|...+.+++|+|++ .++++++.|+.|++
T Consensus       176 h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i  253 (447)
T 3dw8_B          176 HTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL  253 (447)
T ss_dssp             CSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred             CCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence            778899999999 78999998 799999999984 33333221100 011226789999999998 89999999999999


Q ss_pred             EECCCCeE----EEEeecccc------------cEEEEEECCCCcEEEeeec
Q psy17133         80 FDNVSGKL----VHSMVAHLD------------AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~s~  115 (116)
                      ||+++++.    ...+..+..            .+.+++|+|++++|++++.
T Consensus       254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~  305 (447)
T 3dw8_B          254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY  305 (447)
T ss_dssp             EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred             EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence            99998876    677776665            8999999999999998763

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.84  E-value=6.9e-20  Score=108.70  Aligned_cols=108  Identities=17%  Similarity=0.239  Sum_probs=91.1

Q ss_pred             CCCCceEEEEccC--CCcEEEEeeCCCeEEEEECCCCceeEEEe-----cCCcCcCCCCceeEEEEcCCCC-EEEEEeCC
Q psy17133          3 YNGTPTSIDFVRD--ESTKMVTAFDNSACVLFDLETGKPVVRID-----SSQFGVSGGGGINRVVCHPTLP-LTITAHDD   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d   74 (116)
                      |...|.++.|+|.  +++.+++++.++.+++||+.+++....+.     .+      ...+.+++|+|+++ ++++++.|
T Consensus       208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d  281 (357)
T 3i2n_A          208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH------KSTVWQVRHLPQNRELFLTAGGA  281 (357)
T ss_dssp             CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC------SSCEEEEEEETTEEEEEEEEETT
T ss_pred             CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC------cCCEEEEEECCCCCcEEEEEeCC
Confidence            5678999999984  46889999999999999998766544443     66      67899999999988 89999999


Q ss_pred             CeEEEEECCCC-------------------eEEEEeecccccEEEEEECCCCcEEE-eeecC
Q psy17133         75 RHIRFFDNVSG-------------------KLVHSMVAHLDAVTSLAVDPQGLYIL-SGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~s~d  116 (116)
                      +.|++||+.++                   +.+..+..|...|.+++|+|++++|+ +++.|
T Consensus       282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d  343 (357)
T 3i2n_A          282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD  343 (357)
T ss_dssp             SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT
T ss_pred             CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC
Confidence            99999998753                   45667778999999999999999998 78765

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=99.84  E-value=6.5e-19  Score=105.17  Aligned_cols=109  Identities=17%  Similarity=0.202  Sum_probs=93.2

Q ss_pred             CCCCCceEEEEccC-CCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCCCe
Q psy17133          2 FYNGTPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDDRH   76 (116)
Q Consensus         2 ~~~~~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d~~   76 (116)
                      .|.+.|.+++|+|+ +++++++++.|+.|++||+.+++  .+..+..+      ...+.+++|+|+  +..+++++.|+.
T Consensus        53 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~~~d~~  126 (379)
T 3jrp_A           53 GHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVH------SASVNSVQWAPHEYGPLLLVASSDGK  126 (379)
T ss_dssp             CCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCC------SSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred             CCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCC------CcceEEEEeCCCCCCCEEEEecCCCc
Confidence            37789999999872 27999999999999999999876  56666666      678999999999  899999999999


Q ss_pred             EEEEECCCCe--EEEEeecccccEEEEEECC-------------CCcEEEeeecC
Q psy17133         77 IRFFDNVSGK--LVHSMVAHLDAVTSLAVDP-------------QGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~s~d  116 (116)
                      |++||+.++.  ....+..|...+.+++|+|             ++++|++++.|
T Consensus       127 i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  181 (379)
T 3jrp_A          127 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD  181 (379)
T ss_dssp             EEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT
T ss_pred             EEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC
Confidence            9999998763  3445667888999999999             69999998865

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.84  E-value=8e-19  Score=107.68  Aligned_cols=104  Identities=13%  Similarity=0.061  Sum_probs=91.4

Q ss_pred             CCCCceEEEEccCC---CcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDE---STKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~---~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      |.+.|.++.|+| +   +.+|++++.|+.|++||+.+++.+..+ .+|      ...+.+++|+ ++.++++++.|+.|+
T Consensus       194 h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h------~~~v~~~~~s-d~~~l~s~~~d~~v~  265 (450)
T 2vdu_B          194 HVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGH------KHFVSSICCG-KDYLLLSAGGDDKIF  265 (450)
T ss_dssp             CSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCC------SSCEEEEEEC-STTEEEEEESSSEEE
T ss_pred             ccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCC------CCceEEEEEC-CCCEEEEEeCCCeEE
Confidence            678899999999 6   789999999999999999988877774 466      6789999999 999999999999999


Q ss_pred             EEECCCCeEEEEeecc-------------------------cccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAH-------------------------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~-------------------------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||+.+++.+..+..+                         ...+..++|+|++++|++++
T Consensus       266 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~  326 (450)
T 2vdu_B          266 AWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV  326 (450)
T ss_dssp             EEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred             EEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence            9999999988877522                         34688999999999999887

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.83  E-value=3.5e-19  Score=105.86  Aligned_cols=110  Identities=8%  Similarity=0.099  Sum_probs=88.7

Q ss_pred             CceEEEEccCCCcE----EEEeeCCCeEEEEECCCC---ceeEEEecCCcC------cCCCCceeEEEEcCCCCEEEEEe
Q psy17133          6 TPTSIDFVRDESTK----MVTAFDNSACVLFDLETG---KPVVRIDSSQFG------VSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         6 ~v~~~~~~~~~~~~----l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      .+.++.+.+ +...    +++++.++.+++|++...   +.+..+..+...      ..+...+.+++|+|+++++++++
T Consensus       214 ~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~  292 (368)
T 3mmy_A          214 QHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG  292 (368)
T ss_dssp             CEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE
T ss_pred             CCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc
Confidence            344555554 3333    899999999999999876   556777777320      00111699999999999999999


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|+.|++||+.+++.+..+..|...+.+++|+|++++|++++.|
T Consensus       293 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d  336 (368)
T 3mmy_A          293 SDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY  336 (368)
T ss_dssp             TTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred             cCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence            99999999999999999999999999999999999999999865

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=99.83  E-value=1.7e-19  Score=110.64  Aligned_cols=106  Identities=17%  Similarity=0.195  Sum_probs=93.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE----EEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV----RIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~   75 (116)
                      +...|.+++|+| ++++|++++.++.+++|++.+++...    .+.+|      ...+.+++|+|+   ++++++++.|+
T Consensus       148 ~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~sp~~~~~~~l~s~~~d~  220 (450)
T 2vdu_B          148 FSKRPNAISIAE-DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGH------VSMLTDVHLIKDSDGHQFIITSDRDE  220 (450)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEEC------SSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred             CCCCceEEEEcC-CCCEEEEEeCCCcEEEEecCCcccccccceeeecc------cCceEEEEEcCCCCCCcEEEEEcCCC
Confidence            457789999999 88999999999999999998766443    55666      678999999999   99999999999


Q ss_pred             eEEEEECCCCeEEEE-eecccccEEEEEECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVSGKLVHS-MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|
T Consensus       221 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d  261 (450)
T 2vdu_B          221 HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD  261 (450)
T ss_dssp             CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred             cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence            999999999888777 55788999999999 99999999875

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.83  E-value=1.2e-18  Score=104.87  Aligned_cols=113  Identities=14%  Similarity=0.220  Sum_probs=90.5

Q ss_pred             CCCCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCc-eeEEEecCCc---------CcCCCCceeEEEEcCCCCEEEEE
Q psy17133          3 YNGTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGK-PVVRIDSSQF---------GVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      |.+.|.+++|+| ++. .+++++.++.+++||+.++. ....+..+..         ...|...+.+++|+|++++++++
T Consensus       185 ~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  263 (408)
T 4a11_B          185 HRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV  263 (408)
T ss_dssp             CCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred             CCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence            678899999999 555 68899999999999998665 3444422111         01346789999999999999999


Q ss_pred             eCCCeEEEEECCCC-----------------------------------------------eEEEEeecccccEEEEEEC
Q psy17133         72 HDDRHIRFFDNVSG-----------------------------------------------KLVHSMVAHLDAVTSLAVD  104 (116)
Q Consensus        72 ~~d~~i~~~~~~~~-----------------------------------------------~~~~~~~~~~~~v~~~~~~  104 (116)
                      +.|+.|++||+.++                                               +.+..+.+|...|.+++|+
T Consensus       264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s  343 (408)
T 4a11_B          264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ  343 (408)
T ss_dssp             ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred             cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEc
Confidence            99999999998653                                               3455666788899999999


Q ss_pred             CCCcEEEeeecC
Q psy17133        105 PQGLYILSGTYQ  116 (116)
Q Consensus       105 ~~~~~l~~~s~d  116 (116)
                      |++++|++++.|
T Consensus       344 ~~~~~l~s~~~d  355 (408)
T 4a11_B          344 SNFQELYSGSRD  355 (408)
T ss_dssp             TTTTEEEEEETT
T ss_pred             CCCCEEEEECCC
Confidence            999999999876

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.83  E-value=4.3e-19  Score=108.19  Aligned_cols=106  Identities=16%  Similarity=0.232  Sum_probs=91.0

Q ss_pred             CCCceEEE--EccCCCcEEEEeeCCCeEEEEECCCCceeEEEec--CCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          4 NGTPTSID--FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDS--SQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         4 ~~~v~~~~--~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      ...+.++.  +++ ++.++++++.++.|++||+.+++.+..+..  |      ...+.+++|+|++.++++++.|+.|++
T Consensus       168 ~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h------~~~v~~~~~s~~~~~l~s~~~dg~i~i  240 (437)
T 3gre_A          168 NEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPR------HGAVSSICIDEECCVLILGTTRGIIDI  240 (437)
T ss_dssp             CCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGG------GCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred             ccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC------CCceEEEEECCCCCEEEEEcCCCeEEE
Confidence            44556666  456 678999999999999999999999999987  5      578999999999999999999999999


Q ss_pred             EECCCCeEEEEee-cccccEEEEEEC----CCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMV-AHLDAVTSLAVD----PQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~s~d  116 (116)
                      ||+++++.+..+. .+...|.+++|+    |++++|++++.|
T Consensus       241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d  282 (437)
T 3gre_A          241 WDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK  282 (437)
T ss_dssp             EETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT
T ss_pred             EEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC
Confidence            9999999988876 677789999665    568899998875

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=99.83  E-value=1.5e-19  Score=107.28  Aligned_cols=108  Identities=12%  Similarity=0.127  Sum_probs=88.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCC---CCEEEEEeCCC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPT---LPLTITAHDDR   75 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~   75 (116)
                      |.+.|.+++|+|++..++++++.   ++.+++|++.+++...... .+      ...+.+++|+|+   +.++++++.|+
T Consensus        17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~l~~~~~dg   90 (357)
T 3i2n_A           17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEK------AKPIKCGTFGATSLQQRYLATGDFGG   90 (357)
T ss_dssp             CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEE------SSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred             CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecc------cCcEEEEEEcCCCCCCceEEEecCCC
Confidence            77899999999943345566665   8999999999877654433 44      568999999998   69999999999


Q ss_pred             eEEEEECCCCe-EEEEeecccccEEEEE------ECCCCcEEEeeecC
Q psy17133         76 HIRFFDNVSGK-LVHSMVAHLDAVTSLA------VDPQGLYILSGTYQ  116 (116)
Q Consensus        76 ~i~~~~~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~s~d  116 (116)
                      .|++||+.+++ .+..+..|...+.++.      |+|++++|++++.|
T Consensus        91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d  138 (357)
T 3i2n_A           91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD  138 (357)
T ss_dssp             CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred             eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC
Confidence            99999999887 7788888999999995      57899999999875

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=99.83  E-value=4.2e-19  Score=107.31  Aligned_cols=114  Identities=16%  Similarity=0.155  Sum_probs=96.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCC---eEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDR---HIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~---~i~   78 (116)
                      |.+.|.+++|+|+++.++++++.++.|++||+.+++.+..+..+.....|...+.+++|+|++ .++++++.++   .|+
T Consensus       164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~  243 (416)
T 2pm9_A          164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL  243 (416)
T ss_dssp             SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred             CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence            678899999999447899999999999999999998888887653222224679999999997 6899999998   999


Q ss_pred             EEECCCC-eEEEEee-cccccEEEEEECC-CCcEEEeeecC
Q psy17133         79 FFDNVSG-KLVHSMV-AHLDAVTSLAVDP-QGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~s~d  116 (116)
                      +||++++ +.+..+. .|...+.+++|+| ++++|++++.|
T Consensus       244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d  284 (416)
T 2pm9_A          244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD  284 (416)
T ss_dssp             EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred             EEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence            9999986 5666676 7889999999999 99999999865

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.83  E-value=8.8e-19  Score=109.59  Aligned_cols=107  Identities=7%  Similarity=-0.008  Sum_probs=87.6

Q ss_pred             CCCCceEEEEccC-----CCcEEEEeeCCCeEEEEECCCCce-----------eEEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133          3 YNGTPTSIDFVRD-----ESTKMVTAFDNSACVLFDLETGKP-----------VVRIDSSQFGVSGGGGINRVVCHPTLP   66 (116)
Q Consensus         3 ~~~~v~~~~~~~~-----~~~~l~~~~~~~~v~i~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~~   66 (116)
                      |.+.|.+++|+|+     ++.+|++++.|+.|++||+.++..           ...+.+|      ...+.+++|++++ 
T Consensus       206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h------~~~v~sv~~s~~~-  278 (524)
T 2j04_B          206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA------DSLITTFDFLSPT-  278 (524)
T ss_dssp             CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCT------TTCEEEEEESSSS-
T ss_pred             cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcC------CCCEEEEEecCCC-
Confidence            4578999999994     257999999999999999976532           2355556      6789999999864 


Q ss_pred             EEEEEeCCCeEEEEECCCCe-EEEEeecccccEEEE--EECCCC-cEEEeeecC
Q psy17133         67 LTITAHDDRHIRFFDNVSGK-LVHSMVAHLDAVTSL--AVDPQG-LYILSGTYQ  116 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~s~d  116 (116)
                      .+++++.|++|++||+++++ ....+..|...|.++  +|+|++ ++|+++|.|
T Consensus       279 ~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D  332 (524)
T 2j04_B          279 TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD  332 (524)
T ss_dssp             EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred             eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence            79999999999999998764 445677899999999  578888 899999986

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.82  E-value=2.7e-19  Score=107.49  Aligned_cols=75  Identities=15%  Similarity=0.059  Sum_probs=69.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE-ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI-DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |...|++++|+| ++++|++++.|+.|++||+.+++.+..+ .+|      ...|++++|+||+++|++++.|++|+||+
T Consensus       268 ~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH------~~~V~~v~fSpdg~~laS~S~D~tvrvw~  340 (365)
T 4h5i_A          268 RFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAH------SFAITEVTISPDSTYVASVSAANTIHIIK  340 (365)
T ss_dssp             SCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSS------SSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred             CCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcc------cCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence            567899999999 8899999999999999999999988886 577      67899999999999999999999999999


Q ss_pred             CCC
Q psy17133         82 NVS   84 (116)
Q Consensus        82 ~~~   84 (116)
                      +..
T Consensus       341 ip~  343 (365)
T 4h5i_A          341 LPL  343 (365)
T ss_dssp             CCT
T ss_pred             cCC
Confidence            864

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=99.82  E-value=2e-18  Score=104.58  Aligned_cols=105  Identities=17%  Similarity=0.252  Sum_probs=92.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe--CCCeEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH--DDRHIR   78 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--~d~~i~   78 (116)
                      .|.+.|.+++|+| +++++++++.++.|++||+.+++.+..+..+      ...+.+++|+|++. ++++++  .|+.|+
T Consensus       215 ~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~  287 (401)
T 4aez_A          215 GHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNH------NAAVKAVAWCPWQSNLLATGGGTMDKQIH  287 (401)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCC------SSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred             CCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCC------cceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence            3678899999999 8899999999999999999998888888877      67899999999864 666665  699999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||+.+++.+..+. +...+.+++|+|+++++++++
T Consensus       288 i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~  322 (401)
T 4aez_A          288 FWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTH  322 (401)
T ss_dssp             EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred             EEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEe
Confidence            99999999988886 556799999999999999853

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.82  E-value=2.1e-18  Score=105.83  Aligned_cols=104  Identities=19%  Similarity=0.299  Sum_probs=91.7

Q ss_pred             CCCC-ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGT-PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~-v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |.+. +.++.+.   ++++++++.|+.|++||+.+++.+..+.+|      ...|.+++|+|++ .+++++.|+.|++||
T Consensus       120 h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h------~~~V~~l~~~~~~-~l~s~s~dg~i~vwd  189 (464)
T 3v7d_B          120 HMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGH------DGGVWALKYAHGG-ILVSGSTDRTVRVWD  189 (464)
T ss_dssp             CSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEEEEEeCC------CcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence            4455 4566654   479999999999999999999999999988      6789999999988 899999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEEC--CCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVD--PQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~s~d  116 (116)
                      +++++.+..+.+|...|.+++|+  ++++++++++.|
T Consensus       190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d  226 (464)
T 3v7d_B          190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD  226 (464)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT
T ss_pred             CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC
Confidence            99999999999999999999998  578899999875

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=99.82  E-value=1.3e-18  Score=106.08  Aligned_cols=113  Identities=12%  Similarity=0.160  Sum_probs=91.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECC---CCceeEEEecCCcC----cC--CCCceeEEE--EcCCCCEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLE---TGKPVVRIDSSQFG----VS--GGGGINRVV--CHPTLPLTITA   71 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~---~~~~~~~~~~~~~~----~~--~~~~i~~~~--~~~~~~~~~~~   71 (116)
                      |.+.|.+++|+| +++.+++++.|+.|++||+.   +++....+..+...    ..  +...+.++.  +++++..++++
T Consensus       110 h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  188 (437)
T 3gre_A          110 CSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL  188 (437)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred             CCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence            678899999999 88999999999999999994   45544433322000    00  134566666  56889999999


Q ss_pred             eCCCeEEEEECCCCeEEEEeec--ccccEEEEEECCCCcEEEeeecC
Q psy17133         72 HDDRHIRFFDNVSGKLVHSMVA--HLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        72 ~~d~~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|+.|++||+++++.+..+..  |...|.+++|+|++++|++++.|
T Consensus       189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d  235 (437)
T 3gre_A          189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR  235 (437)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred             eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence            9999999999999999999887  78899999999999999999876

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.82  E-value=1.2e-19  Score=109.89  Aligned_cols=95  Identities=8%  Similarity=0.039  Sum_probs=80.6

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEE-----EecCCcCcCCCCceeEEEEcC--------CCCEEEEEeCCCeEEEEEC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVR-----IDSSQFGVSGGGGINRVVCHP--------TLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~d~~i~~~~~   82 (116)
                      ++.++++++.|+.|++||..+++....     +.+|      ...|.+++|+|        ++++|++++.|++|++||+
T Consensus       100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH------~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~  173 (393)
T 4gq1_A          100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGH------HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL  173 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSC------SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred             CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCC------CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence            567899999999999999987754332     3455      78899999998        7889999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      .++..+..+..|...+.+++|+|++. +|++++.|
T Consensus       174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d  208 (393)
T 4gq1_A          174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN  208 (393)
T ss_dssp             ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred             CCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence            88888777777888999999999875 78888875

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.81  E-value=8.6e-18  Score=98.42  Aligned_cols=101  Identities=17%  Similarity=0.222  Sum_probs=83.7

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ...++|++ + +.|++|. |+.|++||..+++.+..+..+.    |...|.+++|+|+++++++++.|+.|++|++++++
T Consensus        28 ~~~l~WS~-~-~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~----~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~  100 (318)
T 4ggc_A           28 LNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDILQLLQMEQ----PGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK  100 (318)
T ss_dssp             CBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEEEEEECCS----TTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             ceEEEECC-C-CEEEEEe-CCEEEEEECCCCCEEEEEEecC----CCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence            46689998 4 4666654 8999999999999888776542    15679999999999999999999999999999999


Q ss_pred             EEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         87 LVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+..+.+|...+..+.  +++..+++++.+
T Consensus       101 ~~~~~~~h~~~~~~~~--~~~~~l~s~~~~  128 (318)
T 4ggc_A          101 RLRNMTSHSARVGSLS--WNSYILSSGSRS  128 (318)
T ss_dssp             EEEEEECCSSCEEEEE--EETTEEEEEETT
T ss_pred             eEEEecCccceEEEee--cCCCEEEEEecC
Confidence            9999998888776654  456788887754

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=99.81  E-value=2.2e-18  Score=100.69  Aligned_cols=105  Identities=14%  Similarity=0.143  Sum_probs=91.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++| | +++++++++.++.|++||+.+++....+..+      ...+.+++|+|++..+++++.|+.+++|+
T Consensus        16 ~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~dg~i~~~~   87 (313)
T 3odt_A           16 GHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTG------QGFLNSVCYDSEKELLLFGGKDTMINGVP   87 (313)
T ss_dssp             CCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEEC------SSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             CCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecC------CccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence            47889999999 8 7789999999999999999988888888887      67899999999999999999999999999


Q ss_pred             CCCC---eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +...   +.+..+..|...+.+++|  +++++++++.|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d  123 (313)
T 3odt_A           88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWD  123 (313)
T ss_dssp             TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred             eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCC
Confidence            8643   556677788999999999  57788888765

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.81  E-value=9e-18  Score=101.07  Aligned_cols=107  Identities=9%  Similarity=0.113  Sum_probs=94.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~d~~i~~   79 (116)
                      |.+.|.++.|+|+++.++++++.++.+++||+.+++.+..+...       ..+..+.+.|.   +.++++++.++.|++
T Consensus        98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  170 (408)
T 4a11_B           98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-------ETVYSHHMSPVSTKHCLVAVGTRGPKVQL  170 (408)
T ss_dssp             CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS-------SCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred             CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC-------CceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence            78899999999966789999999999999999988887777643       57889999985   449999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCc-EEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGL-YILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d  116 (116)
                      ||+.+++.+..+..|...+.+++|+|+++ .|++++.|
T Consensus       171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~d  208 (408)
T 4a11_B          171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASAD  208 (408)
T ss_dssp             EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETT
T ss_pred             EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCC
Confidence            99999999888988999999999999998 58888765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.80  E-value=2.2e-18  Score=105.66  Aligned_cols=103  Identities=6%  Similarity=0.011  Sum_probs=86.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+|++++++++++.|+.|++||+.++..+....+|      ...+.+++|+|+++.+++++.|+.|++||+
T Consensus       148 h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~------~~~v~~v~wspdg~~lasgs~dg~v~iwd~  221 (434)
T 2oit_A          148 AGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS------TVAVTSVCWSPKGKQLAVGKQNGTVVQYLP  221 (434)
T ss_dssp             GGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG------GGCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred             CCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC------CCceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence            57889999999955789999999999999999988666566666      568999999999999999999999999999


Q ss_pred             CCCeEEEEeecc-------cccEEEEEECCCCcEEEe
Q psy17133         83 VSGKLVHSMVAH-------LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~  112 (116)
                      + ++....+..+       ...+.+++|++++.++++
T Consensus       222 ~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~  257 (434)
T 2oit_A          222 T-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIV  257 (434)
T ss_dssp             T-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred             C-CcccccccCCcccCCCCceeEEEEEEecCceEEEE
Confidence            8 5555555432       237899999999888754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=99.80  E-value=7.7e-18  Score=103.36  Aligned_cols=103  Identities=16%  Similarity=0.220  Sum_probs=91.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++  ++ +++.+++++.++.|++||+.+++.+..+.+|      ...+.+++|+|+++.+++++.|+.|++||+
T Consensus       269 ~~~~v~~~--~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~  339 (464)
T 3v7d_B          269 HMASVRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGH------TDRIYSTIYDHERKRCISASMDTTIRIWDL  339 (464)
T ss_dssp             CSSCEEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             ccceEEEE--cC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCC------CCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence            44555555  45 5689999999999999999999999999888      678999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.+..+..|...+.+++|+  +++|++++.|
T Consensus       340 ~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d  371 (464)
T 3v7d_B          340 ENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD  371 (464)
T ss_dssp             TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT
T ss_pred             CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC
Confidence            9999999999999999999997  5789998876

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.80  E-value=2.5e-17  Score=100.33  Aligned_cols=105  Identities=16%  Similarity=0.246  Sum_probs=92.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|++++|+| ++++|++|+.|+.|++||+.+++.+..+.+|      ...+.++.+  ++..+++++.|+.+++|+.
T Consensus       146 ~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h------~~~v~~~s~--~~~~l~sgs~d~~i~~~d~  216 (420)
T 4gga_A          146 PGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH------SARVGSLSW--NSYILSSGSRSGHIHHHDV  216 (420)
T ss_dssp             TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred             CCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEEEEEeCC------CCceEEEee--CCCEEEEEeCCCceeEeee
Confidence            456799999999 8899999999999999999999999999988      567777766  5679999999999999998


Q ss_pred             CCC-eEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSG-KLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ... ..+..+..|...+..+.|+|+++++++++.|
T Consensus       217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D  251 (420)
T 4gga_A          217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND  251 (420)
T ss_dssp             TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence            754 4566778899999999999999999998875

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.80  E-value=6.9e-18  Score=109.22  Aligned_cols=108  Identities=17%  Similarity=0.250  Sum_probs=93.2

Q ss_pred             CCCCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcC-------------C
Q psy17133          2 FYNGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHP-------------T   64 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~-------------~   64 (116)
                      .|.+.|.++.|+| +  ++.+++++.++.|++||+.++.  ....+..+      ...+.+++|+|             +
T Consensus        97 ~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~------~~~v~~l~~~p~~~~~~~~~~~~~d  169 (753)
T 3jro_A           97 VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH------AIGVNSASWAPATIEEDGEHNGTKE  169 (753)
T ss_dssp             CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC------SSCEEEEEECCCC---------CGG
T ss_pred             CCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC------CCceEEEEecCcccccccccccCCC
Confidence            3678899999999 6  8999999999999999998763  34455666      67899999999             5


Q ss_pred             CCEEEEEeCCCeEEEEECCCC----eEEEEeecccccEEEEEECCC---CcEEEeeecC
Q psy17133         65 LPLTITAHDDRHIRFFDNVSG----KLVHSMVAHLDAVTSLAVDPQ---GLYILSGTYQ  116 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~~~s~d  116 (116)
                      +..+++++.|+.|++||+.++    .....+..|...|.+++|+|+   +++|++++.|
T Consensus       170 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D  228 (753)
T 3jro_A          170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD  228 (753)
T ss_dssp             GCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred             CCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence            899999999999999999876    556677789999999999999   8999999875

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.80  E-value=1.9e-18  Score=104.65  Aligned_cols=114  Identities=9%  Similarity=0.079  Sum_probs=77.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc------------CCCCceeEEEEcC--CCCEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV------------SGGGGINRVVCHP--TLPLT   68 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~--~~~~~   68 (116)
                      |...+.++.|++.++..+++++.++.+++||+..++....+..+....            ..........++|  ++.++
T Consensus       253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (393)
T 4gq1_A          253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA  332 (393)
T ss_dssp             CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred             ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence            567788999874388999999999999999998776555554432100            0001112233443  34467


Q ss_pred             EEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         69 ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        69 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.|+.|++||+.+++.......|...|.+++|+|+|++|++++.|
T Consensus       333 ~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~  380 (393)
T 4gq1_A          333 TAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEG  380 (393)
T ss_dssp             EEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESS
T ss_pred             EEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence            788899999999999998887777788899999999999999999865

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.78  E-value=6.7e-18  Score=105.76  Aligned_cols=103  Identities=10%  Similarity=0.096  Sum_probs=83.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHI   77 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i   77 (116)
                      ..+.+++|+| ++++|++++.|++|++|++.++.       .+..++.+..  +|...|.+++|+|++  +++++.|+.+
T Consensus       130 ~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~--gh~~~V~sVawSPdg--Laass~D~tV  204 (588)
T 2j04_A          130 RTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA--GSKDWVTHIVWYEDV--LVAALSNNSV  204 (588)
T ss_dssp             TCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT--TCCCCEEEEEEETTE--EEEEETTCCE
T ss_pred             ccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc--cccccEEEEEEcCCc--EEEEeCCCeE
Confidence            3589999999 89999999999999999998775       2566643321  135689999999999  7888889999


Q ss_pred             EEEECCCCeE---EEEee-cccccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKL---VHSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++|++..++.   .+.+. +|...|.+++|+  ++.|++++
T Consensus       205 rlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~  243 (588)
T 2j04_A          205 FSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC  243 (588)
T ss_dssp             EEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred             EEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence            9999987763   34553 677889999999  68888876

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.77  E-value=9.1e-17  Score=98.34  Aligned_cols=106  Identities=13%  Similarity=0.259  Sum_probs=88.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++.++   ++.+++++.++.|++||+.+++.+..+..+..   |...+.+++++  +.++++++.|+.|++||+
T Consensus       318 ~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~---~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~  389 (445)
T 2ovr_B          318 HQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNK---HQSAVTCLQFN--KNFVITSSDDGTVKLWDL  389 (445)
T ss_dssp             CCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECSTTS---CSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred             CcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccCCC---CCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence            45667777664   37899999999999999999998888876311   15679999885  579999999999999999


Q ss_pred             CCCeEEEEe-----ecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSM-----VAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+     ..+.+.+.+++|+|++.++++++.|
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~d  428 (445)
T 2ovr_B          390 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN  428 (445)
T ss_dssp             TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred             CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccC
Confidence            999998887     3577889999999999999998875

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.76  E-value=1.1e-16  Score=97.85  Aligned_cols=101  Identities=15%  Similarity=0.278  Sum_probs=88.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|.++.|   +++++++++.++.|++||..+++.+..+.+|      ...|.++++  ++..+++++.|+.|++||+
T Consensus       132 ~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h------~~~v~~l~~--~~~~l~sg~~dg~i~vwd~  200 (435)
T 1p22_A          132 TSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGH------TGSVLCLQY--DERVIITGSSDSTVRVWDV  200 (435)
T ss_dssp             SCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCC------SSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred             CCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCC------CCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence            3455777766   5689999999999999999999999999888      678999888  7889999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..|...+.+++|++  ..+++++.|
T Consensus       201 ~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d  232 (435)
T 1p22_A          201 NTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKD  232 (435)
T ss_dssp             SSCCEEEEECCCCSCEEEEECCT--TEEEEEETT
T ss_pred             CCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCC
Confidence            99999999999999999999974  488888765

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=99.76  E-value=1.4e-16  Score=97.32  Aligned_cols=102  Identities=20%  Similarity=0.289  Sum_probs=90.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.++.|.   ++.+++++.++.+++||+.+++.+..+.++      ...+.++.+  ++..+++++.|+.|++||
T Consensus       254 ~~~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~g~~dg~i~iwd  322 (435)
T 1p22_A          254 GHRAAVNVVDFD---DKYIVSASGDRTIKVWNTSTCEFVRTLNGH------KRGIACLQY--RDRLVVSGSSDNTIRLWD  322 (435)
T ss_dssp             CCSSCEEEEEEE---TTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred             CCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCcCcEEEEEcCC------CCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence            366788889883   489999999999999999999999999888      667888888  468999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+++.+..+..|...+.+++|  ++++|++++.|
T Consensus       323 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d  355 (435)
T 1p22_A          323 IECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD  355 (435)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred             CCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence            9999999999999999999998  78899999875

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.76  E-value=2.4e-17  Score=97.97  Aligned_cols=104  Identities=9%  Similarity=0.015  Sum_probs=78.3

Q ss_pred             CCCceEEEEccCC----CcEEEEeeC--------------------CCeEEEEECC-CCceeEEEecCCcCcCCCCceeE
Q psy17133          4 NGTPTSIDFVRDE----STKMVTAFD--------------------NSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINR   58 (116)
Q Consensus         4 ~~~v~~~~~~~~~----~~~l~~~~~--------------------~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~   58 (116)
                      .+.|..++++| +    ++.+++++.                    ++.|++|++. +++.+..+..+      +..+..
T Consensus       111 ~~~v~sla~sp-d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~------~~~v~~  183 (356)
T 2w18_A          111 IREIRALFCSS-DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLM------PPEETI  183 (356)
T ss_dssp             EEEEEEECC-------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEEC------CCSSCE
T ss_pred             ccceEEEEECC-CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccC------CCceee
Confidence            34677788888 5    566665442                    7788888884 47777777777      557788


Q ss_pred             EEEcC---CCCEEEEEeCCCeEEEEECCCCeEEEEeeccc---ccEEEEEECCCCcEEEeee
Q psy17133         59 VVCHP---TLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL---DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        59 ~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++|+|   ++..+++++.|++|++||+++++.++.+.+|.   ..+..++|+|+|+++++++
T Consensus       184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s  245 (356)
T 2w18_A          184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS  245 (356)
T ss_dssp             EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred             EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence            88888   67899999999999999999999999997543   3567779999999886543

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.75  E-value=3.3e-16  Score=95.56  Aligned_cols=104  Identities=13%  Similarity=0.049  Sum_probs=83.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCC---eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCC--e
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNS---ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDR--H   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~---~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~--~   76 (116)
                      |.+.+.+++|+| +++.|++++.++   .|++||+.+++.. .+..+      ...+.+++|+|+++.++ +++.++  .
T Consensus       177 ~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~------~~~~~~~~~spdg~~la~~~~~~g~~~  248 (415)
T 2hqs_A          177 SPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVR-QVASF------PRHNGAPAFSPDGSKLAFALSKTGSLN  248 (415)
T ss_dssp             ESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             CCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC------CCcccCEEEcCCCCEEEEEEecCCCce
Confidence            467889999999 788998888664   8999999988764 45555      45789999999999777 565554  5


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++||+.+++. ..+..+...+..++|+|+|++|+.++.
T Consensus       249 i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~  286 (415)
T 2hqs_A          249 LYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSD  286 (415)
T ss_dssp             EEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEEC
T ss_pred             EEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEEC
Confidence            99999998876 456667778999999999999987764

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=99.74  E-value=6.7e-16  Score=94.53  Aligned_cols=101  Identities=17%  Similarity=0.285  Sum_probs=58.7

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.++.|++   +.+++++.++.+++||+.+++.+..+.++      ...+.++.+  ++..+++++.|+.|++||+
T Consensus       198 h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~~~~dg~i~iwd~  266 (445)
T 2ovr_B          198 HTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGH------VAAVRCVQY--DGRRVVSGAYDFMVKVWDP  266 (445)
T ss_dssp             CSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECC------SSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred             CCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCC------cccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence            444555555543   44555666666666666655555555555      445555555  4555666666666666666


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+..|...+.+++|  +++++++++.|
T Consensus       267 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d  298 (445)
T 2ovr_B          267 ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD  298 (445)
T ss_dssp             GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred             CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence            666666666556566666665  55566655543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.74  E-value=6.5e-16  Score=94.02  Aligned_cols=104  Identities=15%  Similarity=0.147  Sum_probs=89.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~   81 (116)
                      |.+.+.++.|+| ++..+++++.++.+++||+.+++.+..+..+      ...+.+++|+|+++.+++ ++.++.|++||
T Consensus       168 ~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d  240 (433)
T 3bws_A          168 KLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLT------GKWSKILLYDPIRDLVYCSNWISEDISVID  240 (433)
T ss_dssp             TCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECS------SSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCC------CCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence            556789999998 7889999999999999999998888888876      567999999999987754 55799999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+++.+..+.. ...+..++|+|+++++++++
T Consensus       241 ~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~  272 (433)
T 3bws_A          241 RKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQ  272 (433)
T ss_dssp             TTTTEEEEECCC-CSEEEEEEECTTSSEEEEEE
T ss_pred             CCCCcEEEEecC-CCCceEEEEcCCCCEEEEEE
Confidence            999998887764 34589999999999988776

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.72  E-value=2.9e-15  Score=90.16  Aligned_cols=102  Identities=14%  Similarity=0.233  Sum_probs=84.0

Q ss_pred             CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~   81 (116)
                      ...+.+++|+| +++.+ ++++.++.|++||..+++.+..+..+       ..+.+++|+|+++.++. +..++.|++||
T Consensus        31 ~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~~~~~v~v~d  102 (391)
T 1l0q_A           31 GSNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAG-------SSPQGVAVSPDGKQVYVTNMASSTLSVID  102 (391)
T ss_dssp             SSSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECC-------CCccceEECCCCCEEEEEECCCCEEEEEE
Confidence            45688999999 66765 66778999999999999888888766       37999999999997754 55679999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEE-Eeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYI-LSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s  114 (116)
                      +.+++.+..+..+ ..+..++|+|+++.+ ++++
T Consensus       103 ~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~  135 (391)
T 1l0q_A          103 TTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNN  135 (391)
T ss_dssp             TTTTEEEEEEECS-SSEEEEEECTTSSEEEEEET
T ss_pred             CCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeC
Confidence            9999988877744 468999999999987 4554

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.70  E-value=2.8e-16  Score=95.60  Aligned_cols=108  Identities=12%  Similarity=0.115  Sum_probs=88.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.+++|+| ++.++++++.++.|++||..+++.+..+... ....|...+.+++|+|++.++++++.|+.|++||+++
T Consensus       123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~  200 (433)
T 3bws_A          123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPE-KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT  200 (433)
T ss_dssp             SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCH-HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred             CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcc-cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence            4567899999 7788888888999999999988877533210 0011256799999999999999999999999999999


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+..+..+...+..++|+|+++.+++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  230 (433)
T 3bws_A          201 LAYKATVDLTGKWSKILLYDPIRDLVYCSN  230 (433)
T ss_dssp             CCEEEEEECSSSSEEEEEEETTTTEEEEEE
T ss_pred             ceEEEEEcCCCCCeeEEEEcCCCCEEEEEe
Confidence            999888888888999999999999886544

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.70  E-value=9.4e-15  Score=87.91  Aligned_cols=102  Identities=15%  Similarity=0.251  Sum_probs=85.5

Q ss_pred             CCCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~   81 (116)
                      ...+.+++|+| +++.+ ++++.++.|++||+.+++.+..+..+       ..+..++|+|+++.+ ++++.++.|++||
T Consensus       115 ~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d  186 (391)
T 1l0q_A          115 GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-------RSPKGIAVTPDGTKVYVANFDSMSISVID  186 (391)
T ss_dssp             SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-------SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-------CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence            45678999999 66766 67778999999999999888887766       357899999999877 5677889999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+++....+. +...+..++|+|++++|++++
T Consensus       187 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~  218 (391)
T 1l0q_A          187 TVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTN  218 (391)
T ss_dssp             TTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEE
T ss_pred             CCCCeEEEEEe-cCCCccceEECCCCCEEEEEe
Confidence            99998887776 455789999999999988776

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.69  E-value=4.3e-15  Score=99.03  Aligned_cols=105  Identities=20%  Similarity=0.156  Sum_probs=88.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD--------   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d--------   74 (116)
                      +...+..++|+| +++.|++++.++.+++||+.+++....+..+      ...+..++|+|||+++++++.+        
T Consensus       377 ~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~------~~~v~~~~~SpDG~~la~~~~~~~~~~~~~  449 (1045)
T 1k32_A          377 NLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSR------EAMITDFTISDNSRFIAYGFPLKHGETDGY  449 (1045)
T ss_dssp             CCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECS------SSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred             CccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCC------CCCccceEECCCCCeEEEEecCccccccCC
Confidence            346788999999 8899999999999999999988877776666      5678999999999988887654        


Q ss_pred             --CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         75 --RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        75 --~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                        +.|++||+.+++ ...+..+...+..++|+|+|++|+.++.
T Consensus       450 ~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~  491 (1045)
T 1k32_A          450 VMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSY  491 (1045)
T ss_dssp             CEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred             CCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEec
Confidence              389999999887 5666667777889999999999987764

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.66  E-value=3.7e-15  Score=96.00  Aligned_cols=106  Identities=13%  Similarity=0.123  Sum_probs=84.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeC-CC-----eEEEEECCCCceeEEEecCCcCcCCC----------------------Cc
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD-NS-----ACVLFDLETGKPVVRIDSSQFGVSGG----------------------GG   55 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~-~~-----~v~i~~~~~~~~~~~~~~~~~~~~~~----------------------~~   55 (116)
                      ...+.+++|+| ++++|++++. ++     .|++||+.+++....+..+..    .                      ..
T Consensus        36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  110 (741)
T 2ecf_A           36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVV----LPGTETLSDEEKARRERQRIAAMTG  110 (741)
T ss_dssp             CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGT----C--------------------CCEE
T ss_pred             CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhc----ccccccccchhhhhhhhhhhccccC
Confidence            45689999999 8899998887 77     899999998887666654311    1                      23


Q ss_pred             eeEEEEcCCCCEEEEEeCCCeEEEEECCCCe--EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         56 INRVVCHPTLPLTITAHDDRHIRFFDNVSGK--LVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        56 i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +..++|+|||+.+++++. +.|++||+.++.  ....+..+...+..++|+|||++|+.++.
T Consensus       111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~  171 (741)
T 2ecf_A          111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG  171 (741)
T ss_dssp             SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET
T ss_pred             cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC
Confidence            788999999999998886 999999998872  33345556678999999999999988764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.65  E-value=2.8e-14  Score=87.13  Aligned_cols=104  Identities=10%  Similarity=0.105  Sum_probs=79.5

Q ss_pred             CCCCceEEEEccCCCcEEE-EeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CC--e
Q psy17133          3 YNGTPTSIDFVRDESTKMV-TAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DR--H   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~-~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~--~   76 (116)
                      +.+.+.+++|+| +++.|+ +++.+  ..|++||+.+++. ..+..+      ...+..++|+|+++.+++++. ++  .
T Consensus       221 ~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~------~~~~~~~~~spdg~~l~~~s~~~g~~~  292 (415)
T 2hqs_A          221 FPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG------RSNNTEPTWFPDSQNLAFTSDQAGRPQ  292 (415)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred             CCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC------CCcccceEECCCCCEEEEEECCCCCcE
Confidence            456788999999 777776 55544  4599999987764 555555      467899999999998888776 34  7


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |.+||+.+++.. .+..+...+..++|+|+|++|+.++.
T Consensus       293 i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~~  330 (415)
T 2hqs_A          293 VYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVSS  330 (415)
T ss_dssp             EEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred             EEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEEC
Confidence            888899887653 34445667889999999999987764

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.62  E-value=4.9e-15  Score=85.62  Aligned_cols=107  Identities=15%  Similarity=0.136  Sum_probs=82.0

Q ss_pred             CCCCceEEEEccCCCcEEEEee-CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF-DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------   74 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------   74 (116)
                      +...+.++.|+| +++.+++++ .++.+.+|++. .+.....+..+      ...+..+.|+|+++.+++++.+      
T Consensus       171 ~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~~  243 (297)
T 2ojh_A          171 GEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS------AYGDWFPHPSPSGDKVVFVSYDADVFDH  243 (297)
T ss_dssp             SSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCC------SEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred             CCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecC------CcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence            446788999999 777776655 57888888875 45556666655      4578899999999988877655      


Q ss_pred             -----CeEEEEECCCCeEEE--EeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 -----RHIRFFDNVSGKLVH--SMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 -----~~i~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                           ..|.+||+.+++...  .+..+...+..++|+|++++|++++.|
T Consensus       244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~  292 (297)
T 2ojh_A          244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF  292 (297)
T ss_dssp             CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred             cccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence                 569999998876543  343567788899999999999887754

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.59  E-value=1.8e-13  Score=86.15  Aligned_cols=96  Identities=19%  Similarity=0.136  Sum_probs=82.8

Q ss_pred             EEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC--CCCeEE
Q psy17133         11 DFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN--VSGKLV   88 (116)
Q Consensus        11 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~--~~~~~~   88 (116)
                      .|+| ++..+++++.++.|.+||..+++.+..+...      . .+..++++|+++++++++.++.|.+||+  .+++.+
T Consensus       144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g------~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~  215 (543)
T 1nir_A          144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTG------Y-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV  215 (543)
T ss_dssp             CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECS------T-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE
T ss_pred             ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecC------c-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE
Confidence            3788 6678888889999999999999999888844      2 3789999999999999999999999999  888888


Q ss_pred             EEeecccccEEEEEECC----CCcEEEeeec
Q psy17133         89 HSMVAHLDAVTSLAVDP----QGLYILSGTY  115 (116)
Q Consensus        89 ~~~~~~~~~v~~~~~~~----~~~~l~~~s~  115 (116)
                      ..+. ....+..++|+|    +|+++++++.
T Consensus       216 ~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~  245 (543)
T 1nir_A          216 AEIK-IGIEARSVESSKFKGYEDRYTIAGAY  245 (543)
T ss_dssp             EEEE-CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred             EEEe-cCCCcceEEeCCCcCCCCCEEEEEEc
Confidence            8877 445689999999    9999998763

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.58  E-value=1.6e-14  Score=91.16  Aligned_cols=100  Identities=13%  Similarity=0.074  Sum_probs=80.0

Q ss_pred             eEEEEccCCCcEEEEeeCC----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEE
Q psy17133          8 TSIDFVRDESTKMVTAFDN----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR--HIRFFD   81 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~--~i~~~~   81 (116)
                      .++.|+| +|++|++++.+    ..|++||+.+++.. .+..+      ...+..++|+|||+.++++..++  .|++||
T Consensus       153 ~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~------~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d  224 (582)
T 3o4h_A          153 FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSG------EGSFSSASISPGMKVTAGLETAREARLVTVD  224 (582)
T ss_dssp             CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCS------SCEEEEEEECTTSCEEEEEECSSCEEEEEEC
T ss_pred             ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecC------CCccccceECCCCCEEEEccCCCeeEEEEEc
Confidence            6789999 88999877655    77999999877654 56655      46789999999999999888888  899999


Q ss_pred             CCCCeEEEEeecccccEEEEE--------ECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLA--------VDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~--------~~~~~~~l~~~s~d  116 (116)
                      +.+++.. .+..+...+..++        |+|||.++++++.|
T Consensus       225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~  266 (582)
T 3o4h_A          225 PRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE  266 (582)
T ss_dssp             TTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET
T ss_pred             CCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcC
Confidence            9988877 6666665566666        99999887777653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.57  E-value=5e-14  Score=90.57  Aligned_cols=104  Identities=11%  Similarity=0.170  Sum_probs=78.9

Q ss_pred             CceEEEEccCCCcEEEEeeCC---------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN---------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .+.+++|+| ++++|++++.+         +.+++||+.+++. ..+.....   +...+..++|+|||+.++.++. +.
T Consensus        62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~---~~~~~~~~~~SPdG~~la~~~~-~~  135 (723)
T 1xfd_A           62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEV---SNAKLQYAGWGPKGQQLIFIFE-NN  135 (723)
T ss_dssp             TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTC---CSCCCSBCCBCSSTTCEEEEET-TE
T ss_pred             ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCcc---ccccccccEECCCCCEEEEEEC-Ce
Confidence            488999999 88988888753         7888999988765 34433210   1334788999999999998876 79


Q ss_pred             EEEEECCCCeEEEEeeccccc------------------EEEEEECCCCcEEEeeec
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDA------------------VTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~~~~~~l~~~s~  115 (116)
                      |++|++.+++..+....+...                  +..++|+|||++|++++.
T Consensus       136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~  192 (723)
T 1xfd_A          136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI  192 (723)
T ss_dssp             EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred             EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence            999999988876665543322                  278999999999998764

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.57  E-value=2.9e-13  Score=78.19  Aligned_cols=104  Identities=8%  Similarity=0.071  Sum_probs=77.8

Q ss_pred             CCceEEEEccCCCcEEE-EeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMV-TAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~-~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~   81 (116)
                      ..+..+.|+| +++.++ ++..++.+.+|++. .......+..+      ...+..+.|+|+++.++.++ .++.+.+|+
T Consensus       129 ~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~  201 (297)
T 2ojh_A          129 LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG------EGRNDGPDYSPDGRWIYFNSSRTGQMQIWR  201 (297)
T ss_dssp             SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCS------SSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccC------CCccccceECCCCCEEEEEecCCCCccEEE
Confidence            4477889999 667665 67788988888853 22334455444      46789999999999777665 588899998


Q ss_pred             CC-CCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         82 NV-SGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        82 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +. .+.....+..+...+..++|+|++++|+.++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~  236 (297)
T 2ojh_A          202 VRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSY  236 (297)
T ss_dssp             EETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred             ECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence            75 45556667667778899999999999987654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.57  E-value=5.2e-13  Score=78.76  Aligned_cols=101  Identities=13%  Similarity=0.188  Sum_probs=76.4

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-C--eEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-R--HIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~--~i~~   79 (116)
                      ..+ .++|+| +++.+++++ .++.+.+||..+++. ...+..+      .....+++++|+++.+++...+ +  .|.+
T Consensus        41 ~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v  112 (331)
T 3u4y_A           41 DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAVTVTGLNHPFNMQS  112 (331)
T ss_dssp             CEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred             Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEEEecCCCCcccEEE
Confidence            345 899999 667665555 488999999998886 6666555      3344449999999988855555 3  9999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ||+.+++.+..+.. ......++|+|+|+++++++
T Consensus       113 ~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~  146 (331)
T 3u4y_A          113 YSFLKNKFISTIPI-PYDAVGIAISPNGNGLILID  146 (331)
T ss_dssp             EETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEE
T ss_pred             EECCCCCeEEEEEC-CCCccceEECCCCCEEEEEe
Confidence            99999998887764 34578999999998766543

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.56  E-value=7.3e-13  Score=78.56  Aligned_cols=101  Identities=11%  Similarity=0.042  Sum_probs=82.4

Q ss_pred             ceEEEEccCCCcEEEEee--CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAF--DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.++.|+| +++.++++.  .++.|.+||..+++.+..+...      ...+..+.++|+++.+++++.++.+.+||..+
T Consensus       143 ~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~  215 (353)
T 3vgz_A          143 PRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT------GKMSTGLALDSEGKRLYTTNADGELITIDTAD  215 (353)
T ss_dssp             EEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCC------CTTCCCCEEETTTTEEEEECTTSEEEEEETTT
T ss_pred             CceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCC------CCccceEEECCCCCEEEEEcCCCeEEEEECCC
Confidence            67899999 667666654  4788999999999888887744      33578899999999999999999999999999


Q ss_pred             CeEEEEeec----ccccEEEEEECCCCcEEEeee
Q psy17133         85 GKLVHSMVA----HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+..+..    +...+..++|+|++++++.++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~  249 (353)
T 3vgz_A          216 NKILSRKKLLDDGKEHFFINISLDTARQRAFITD  249 (353)
T ss_dssp             TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred             CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence            998877653    344678899999999877654

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.56  E-value=5.7e-14  Score=90.56  Aligned_cols=100  Identities=13%  Similarity=0.151  Sum_probs=78.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+++|+| ++++|++++. +.|++||+.++.  ....+..+      ...+..++|+|||+.++.++ ++.|++||+.+
T Consensus       111 v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~------~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~  181 (741)
T 2ecf_A          111 IVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG------EGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS  181 (741)
T ss_dssp             SCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS------SSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred             cceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccC------CcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence            78899999 8898888875 899999998772  34445544      45789999999999998887 46999999998


Q ss_pred             CeEEEEeeccccc----------------EEEEEECCCCcEEEeeec
Q psy17133         85 GKLVHSMVAHLDA----------------VTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        85 ~~~~~~~~~~~~~----------------v~~~~~~~~~~~l~~~s~  115 (116)
                      ++.......+...                +..++|+|||++|++++.
T Consensus       182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~  228 (741)
T 2ecf_A          182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI  228 (741)
T ss_dssp             TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred             CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence            8776554433221                467999999999988754

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.53  E-value=3.8e-12  Score=75.47  Aligned_cols=101  Identities=14%  Similarity=0.178  Sum_probs=78.5

Q ss_pred             CCCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~   81 (116)
                      ...+..+.|+| +++.++++. .++.+.+||..+++.+..+...      .  ...+.|+|+++.++.+. .++.|.+||
T Consensus       230 ~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~------~--~~~~~~s~dg~~l~v~~~~~~~v~~~d  300 (353)
T 3vgz_A          230 EHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVAAP------E--SLAVLFNPARNEAYVTHRQAGKVSVID  300 (353)
T ss_dssp             CCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEECS------S--CCCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC------C--CceEEECCCCCEEEEEECCCCeEEEEE
Confidence            34567799999 667665554 5689999999999888877754      2  25689999998665554 689999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..+++.+..+.. ...+..++|+|++++|+.+.
T Consensus       301 ~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~  332 (353)
T 3vgz_A          301 AKSYKVVKTFDT-PTHPNSLALSADGKTLYVSV  332 (353)
T ss_dssp             TTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEE
T ss_pred             CCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEE
Confidence            999998887764 34688999999999776554

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.53  E-value=2.6e-12  Score=80.98  Aligned_cols=99  Identities=9%  Similarity=0.016  Sum_probs=82.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEEC--CCCceeEEEecCCcCcCCCCceeEEEEcC----CCCEEEEEeC-CCeEEE
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDL--ETGKPVVRIDSSQFGVSGGGGINRVVCHP----TLPLTITAHD-DRHIRF   79 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~-d~~i~~   79 (116)
                      +..+.|+| +++++++++.++.|++||+  .+++.+..+...       ..+..++|+|    +++++++++. ++.|.+
T Consensus       181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v  252 (543)
T 1nir_A          181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-------IEARSVESSKFKGYEDRYTIAGAYWPPQFAI  252 (543)
T ss_dssp             EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-------SEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred             cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-------CCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence            67889999 8899999999999999999  788888888754       4578999999    9999988874 899999


Q ss_pred             EECCCCeEEEEeecc-----------cccEEEEEECCCCcEEEee
Q psy17133         80 FDNVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~  113 (116)
                      ||..+++.+..+..+           ...+..+.++|+++.++..
T Consensus       253 ~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs  297 (543)
T 1nir_A          253 MDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN  297 (543)
T ss_dssp             EETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             EeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence            999999998877632           2268899999987766543

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.53  E-value=1.5e-13  Score=88.27  Aligned_cols=110  Identities=12%  Similarity=0.062  Sum_probs=79.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCC-----CceeEEEecCCcC--------cCCCCceeEEEEcCCCCEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLET-----GKPVVRIDSSQFG--------VSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      .+.+.+++|+| +++.++++ .++.|++|++.+     ++...........        ..+...+..+.|+|||+.|++
T Consensus       120 ~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~  197 (706)
T 2z3z_A          120 NEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAF  197 (706)
T ss_dssp             TTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEE
T ss_pred             cccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEE
Confidence            45678899999 78888885 578999999987     6654433322100        000112578999999999988


Q ss_pred             Ee---------------------------------CCCeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133         71 AH---------------------------------DDRHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        71 ~~---------------------------------~d~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++                                 .+..|++||+.+++......  .+...+..++|+|||++|++++.
T Consensus       198 ~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~  277 (706)
T 2z3z_A          198 YRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV  277 (706)
T ss_dssp             EEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred             EEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence            87                                 44679999999888655442  35567899999999999887653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.53  E-value=2e-13  Score=87.77  Aligned_cols=107  Identities=7%  Similarity=-0.074  Sum_probs=77.6

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc---CC---------CCceeEEEEcCCCCEEEEEeC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV---SG---------GGGINRVVCHPTLPLTITAHD   73 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~---~~---------~~~i~~~~~~~~~~~~~~~~~   73 (116)
                      .+..+.|+| +++.|++++. +.|++|+..+++.......+....   ++         ...+..+.|+|||+.|++++.
T Consensus       115 ~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~  192 (723)
T 1xfd_A          115 KLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI  192 (723)
T ss_dssp             CCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred             cccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence            477899999 7888888875 799999999877665554431100   00         012378999999999888765


Q ss_pred             CC----------------------------------eEEEEECCCCeEEEEeecc------cccEEEEEECCCCcEEEee
Q psy17133         74 DR----------------------------------HIRFFDNVSGKLVHSMVAH------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 d~----------------------------------~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~  113 (116)
                      +.                                  .|++||+.+++....+..+      ...+..++|+|||+++++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~  272 (723)
T 1xfd_A          193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW  272 (723)
T ss_dssp             ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred             CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence            42                                  7999999988765555533      5578899999999988665


Q ss_pred             e
Q psy17133        114 T  114 (116)
Q Consensus       114 s  114 (116)
                      +
T Consensus       273 ~  273 (723)
T 1xfd_A          273 L  273 (723)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.53  E-value=2.7e-13  Score=90.56  Aligned_cols=101  Identities=14%  Similarity=0.149  Sum_probs=83.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEE-EEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACV-LFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~-i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      .+..+.|+  +++.+++++.+..+. +|+..+++. ..+..+      ...+..++|+|+++.+++++.++.+++||+.+
T Consensus       339 ~~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~-~~l~~~------~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t  409 (1045)
T 1k32_A          339 RYVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKA-EKFEEN------LGNVFAMGVDRNGKFAVVANDRFEIMTVDLET  409 (1045)
T ss_dssp             EEEEECSS--SEEEEEEEETTEEEEEEEETTTCCE-EECCCC------CCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             eEEeeeEc--CCCeEEEEECCCceEEEEECCCCCc-eEecCC------ccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence            67788888  567788777777888 899886654 344444      46789999999999999999999999999999


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++.......+...+..++|+|||++|++++.
T Consensus       410 g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~  440 (1045)
T 1k32_A          410 GKPTVIERSREAMITDFTISDNSRFIAYGFP  440 (1045)
T ss_dssp             CCEEEEEECSSSCCCCEEECTTSCEEEEEEE
T ss_pred             CceEEeccCCCCCccceEECCCCCeEEEEec
Confidence            9888777678888899999999999987653

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.52  E-value=8.6e-14  Score=89.59  Aligned_cols=101  Identities=11%  Similarity=0.137  Sum_probs=75.4

Q ss_pred             CceEEEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          6 TPTSIDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .+.+++|+| ++++|++++.         ++.+++||+.+++.+.....       ...+..++|+|||+.++.+. ++.
T Consensus        61 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-------~~~~~~~~~SPDG~~la~~~-~~~  131 (719)
T 1z68_A           61 NASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-------PRPIQYLCWSPVGSKLAYVY-QNN  131 (719)
T ss_dssp             TCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-------CSSBCCEEECSSTTCEEEEE-TTE
T ss_pred             ceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-------CcccccceECCCCCEEEEEE-CCe
Confidence            378999999 8898888765         68999999988765211111       13478899999999998885 789


Q ss_pred             EEEEECCCCeEEEEee-cccccE-----------------EEEEECCCCcEEEeeec
Q psy17133         77 IRFFDNVSGKLVHSMV-AHLDAV-----------------TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~s~  115 (116)
                      |++|++.+++..+... ++...+                 ..++|+|||++|++++.
T Consensus       132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~  188 (719)
T 1z68_A          132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF  188 (719)
T ss_dssp             EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred             EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence            9999998887654332 222212                 47999999999998764

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.52  E-value=8.4e-13  Score=77.90  Aligned_cols=103  Identities=8%  Similarity=0.111  Sum_probs=76.0

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCC-CeEEEEECC--CCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCe
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDN-SACVLFDLE--TGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRH   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~--~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~   76 (116)
                      +.+.+.+++|+| +++++++++.+ +.+.+|++.  +++  .+..+...       ..+..++|+|+++.+++++ .++.
T Consensus        36 ~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~  107 (343)
T 1ri6_A           36 VPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-------GSLTHISTDHQGQFVFVGSYNAGN  107 (343)
T ss_dssp             CSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-------SCCSEEEECTTSSEEEEEETTTTE
T ss_pred             cCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-------CCCcEEEEcCCCCEEEEEecCCCe
Confidence            456788999999 77878777765 899999987  454  23344443       3678999999999776665 4889


Q ss_pred             EEEEECC---CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNV---SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.+|++.   +.+....+.. ...+..++|+|+++++++++
T Consensus       108 i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~  147 (343)
T 1ri6_A          108 VSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPA  147 (343)
T ss_dssp             EEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEE
T ss_pred             EEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEec
Confidence            9999994   3444444443 34588899999999887765

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.52  E-value=2e-12  Score=77.29  Aligned_cols=106  Identities=13%  Similarity=0.194  Sum_probs=74.7

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~   79 (116)
                      ..+..+.|+| ++++++++. .++.|.+|++.+++.  +..+.....   +......++|+|++++++++..  ++.|.+
T Consensus       211 ~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~---~~~~~~~i~~spdg~~l~v~~~~~~~~i~v  286 (361)
T 3scy_A          211 SGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV---NAQGSGDIHLSPDGKYLYASNRLKADGVAI  286 (361)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS---CCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred             CCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC---CCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence            4467899999 778776666 689999999986643  223322210   0234679999999998866655  489999


Q ss_pred             EECC--CCeE--EEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         80 FDNV--SGKL--VHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++.  +++.  +..+.. ...+..++|+|+|++|++++.
T Consensus       287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~  325 (361)
T 3scy_A          287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR  325 (361)
T ss_dssp             EEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred             EEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence            9985  4553  333433 456789999999999888763

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.51  E-value=6.9e-13  Score=78.48  Aligned_cols=100  Identities=11%  Similarity=0.016  Sum_probs=78.5

Q ss_pred             EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEECCCCeE
Q psy17133          9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~~~   87 (116)
                      .+++++ ++..+++++.++.|++||..+++.+..+....     ...+..++++|+++.++ +...++.|.+||+.+++.
T Consensus         4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~   77 (349)
T 1jmx_B            4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-----KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN   77 (349)
T ss_dssp             CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSS-----CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred             cccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-----CCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence            445677 77888999999999999999998888776551     12477899999998654 555689999999999988


Q ss_pred             EEEeeccc------ccEEEEEECCCCcEEEeee
Q psy17133         88 VHSMVAHL------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        88 ~~~~~~~~------~~v~~~~~~~~~~~l~~~s  114 (116)
                      +..+....      ..+..++|+|+|+++++++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~  110 (349)
T 1jmx_B           78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATV  110 (349)
T ss_dssp             EEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred             EEEEEcccccccccccccceEECCCCCEEEEEc
Confidence            77665322      2367899999999998876

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.51  E-value=1.2e-12  Score=77.07  Aligned_cols=105  Identities=18%  Similarity=0.102  Sum_probs=79.5

Q ss_pred             CceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe------------
Q psy17133          6 TPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH------------   72 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------   72 (116)
                      .+..++|+| +++.+ +++..++.|.+||..+++.+..+...... .+...+..++++|+++.++++.            
T Consensus        35 ~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~  112 (337)
T 1pby_B           35 TPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEV  112 (337)
T ss_dssp             CCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred             CccceEEcC-CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc-cccccccceEECCCCCEEEEEecccccccccccc
Confidence            478899999 66555 55566889999999988887777643100 0012467899999999888875            


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .++.|.+||+.+++.+..+.. ...+..++|+|++++|+++
T Consensus       113 ~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~  152 (337)
T 1pby_B          113 QPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL  152 (337)
T ss_dssp             CCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE
T ss_pred             cCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe
Confidence            579999999999988877764 4457789999999987765

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.49  E-value=1.8e-12  Score=76.52  Aligned_cols=102  Identities=16%  Similarity=0.185  Sum_probs=74.0

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~   79 (116)
                      +.+..++|+| +++.+++++ .++.+.+|++.++   +.+..+...       ..+..++|+|+++.+++++ .++.|.+
T Consensus        84 ~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~  155 (343)
T 1ri6_A           84 GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-------DGCHSANISPDNRTLWVPALKQDRICL  155 (343)
T ss_dssp             SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-------TTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred             CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCC-------CCceEEEECCCCCEEEEecCCCCEEEE
Confidence            4678899999 777676555 5889999999433   334444433       3588899999999887776 8999999


Q ss_pred             EECCC-CeEEE----Eeec-ccccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVS-GKLVH----SMVA-HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~-~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |++.+ ++...    .... ....+..++|+|++++++.++
T Consensus       156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~  196 (343)
T 1ri6_A          156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN  196 (343)
T ss_dssp             EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred             EEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence            99987 65432    2222 234688899999999776554

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.48  E-value=6.6e-13  Score=85.33  Aligned_cols=99  Identities=8%  Similarity=-0.046  Sum_probs=75.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.+++|+| + ..++.+. ++.+++||+.+++.... ..+      ...+..++|+|||+.+++. .++.|++|++.+
T Consensus        82 ~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~------~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~  150 (706)
T 2z3z_A           82 FPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARKVTYL-FDT------NEETASLDFSPVGDRVAYV-RNHNLYIARGGK  150 (706)
T ss_dssp             CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTEEEEE-ECC------TTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred             cCceeEEECC-C-CeEEEEE-CCEEEEEECCCCceEEc-cCC------cccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence            4689999999 5 5555544 58999999987765443 333      3467889999999998885 679999999998


Q ss_pred             -----CeEEEEeeccccc--------------EEEEEECCCCcEEEeee
Q psy17133         85 -----GKLVHSMVAHLDA--------------VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 -----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~s  114 (116)
                           ++.......+...              +..+.|+|||++|++++
T Consensus       151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~  199 (706)
T 2z3z_A          151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR  199 (706)
T ss_dssp             TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred             ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence                 7766544433332              47899999999999876

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.47  E-value=1.5e-12  Score=83.12  Aligned_cols=104  Identities=10%  Similarity=0.019  Sum_probs=77.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCC----------CeEEEEECCC------CceeEEEe-cCCcCcCCCCceeEEEEcCCCC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDN----------SACVLFDLET------GKPVVRID-SSQFGVSGGGGINRVVCHPTLP   66 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~----------~~v~i~~~~~------~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~   66 (116)
                      ...+..++|+| +++.|++++.+          ..|++|++.+      ++ ...+. .+      ...+..++|+|||+
T Consensus       129 ~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~------~~~~~~~~~SpDG~  200 (662)
T 3azo_A          129 GLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDA------HRFVTGPRLSPDGR  200 (662)
T ss_dssp             CEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSC------SSEECCCEECTTSS
T ss_pred             CccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecC------CCcccCceECCCCC
Confidence            44678899999 78888887765          5799999986      44 44444 33      34677899999999


Q ss_pred             EEEEEeCC--------CeEEEEECC-CC---eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         67 LTITAHDD--------RHIRFFDNV-SG---KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        67 ~~~~~~~d--------~~i~~~~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .|+..+.+        ..|++||+. ++   +.......+...+..+.|+|||++++++..
T Consensus       201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~  261 (662)
T 3azo_A          201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR  261 (662)
T ss_dssp             EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT
T ss_pred             EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC
Confidence            99877654        479999998 57   444444445678899999999996666543

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.47  E-value=4.5e-12  Score=74.77  Aligned_cols=97  Identities=8%  Similarity=0.067  Sum_probs=71.6

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCCCeE-
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVSGKL-   87 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~-   87 (116)
                      ..|.++....+++...++.|.+||..+++.+..+...      ...+ .++++|+++.+++++. ++.|.+||..+++. 
T Consensus         3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~------~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~   75 (331)
T 3u4y_A            3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG------YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK   75 (331)
T ss_dssp             ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC------CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred             eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc------CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence            3455534445677778999999999999887777755      3445 9999999996666555 89999999998887 


Q ss_pred             EEEeecccccEEEEEECCCCcEEEee
Q psy17133         88 VHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ...+..+.....+++|+|++++++++
T Consensus        76 ~~~~~~~~~~~~~~~~s~dg~~l~~~  101 (331)
T 3u4y_A           76 VVAIQEGQSSMADVDITPDDQFAVTV  101 (331)
T ss_dssp             EEEEEECSSCCCCEEECTTSSEEEEC
T ss_pred             EEecccCCCCccceEECCCCCEEEEe
Confidence            66666555544449999999998844

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.47  E-value=2e-12  Score=83.84  Aligned_cols=105  Identities=14%  Similarity=0.165  Sum_probs=79.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---------C
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---------R   75 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---------~   75 (116)
                      ....++.|+| ++++++++  ++.|++||+.+++....+..+... ........+.|+|||+.++.++.+         +
T Consensus        17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFD-EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTT-TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             ccccccEECC-CCcEEEEc--CCcEEEEECCCCceEEEEechhhh-hhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            3467899999 77777775  899999999999887777766320 001123458899999999888775         5


Q ss_pred             eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+.+||+.+++... +..+...+...+|||||+.|+.++
T Consensus        93 ~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~  130 (740)
T 4a5s_A           93 SYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW  130 (740)
T ss_dssp             EEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE
T ss_pred             EEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE
Confidence            67799999887654 555667899999999999998764

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.46  E-value=9.3e-13  Score=83.18  Aligned_cols=99  Identities=15%  Similarity=0.100  Sum_probs=78.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEE--------EcCCCCEEEEEe
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV--------CHPTLPLTITAH   72 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~   72 (116)
                      +.+.+..+.|+| +++.|+++..++  .|++||+.+++.. .+..+      ...+..+.        |+|||.++++++
T Consensus       193 ~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~spdg~~~~~~~  264 (582)
T 3o4h_A          193 GEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELP------SKDFSSYRPTAITWLGYLPDGRLAVVAR  264 (582)
T ss_dssp             SSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCS------CSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred             CCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCC------CcChhhhhhccccceeEcCCCcEEEEEE
Confidence            456678999999 888888777777  8999999988766 55555      33455555        999998889999


Q ss_pred             CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         73 DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .++.+++|++  ++.+.   ...+.+..++|+ +++++++++.
T Consensus       265 ~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~  301 (582)
T 3o4h_A          265 REGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTS  301 (582)
T ss_dssp             ETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred             cCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcC
Confidence            9999999999  66554   234678899999 9998887664

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.45  E-value=2.9e-11  Score=71.85  Aligned_cols=109  Identities=11%  Similarity=0.157  Sum_probs=74.0

Q ss_pred             CceEEEEccCCCcEEEE-eeCCCeEEEEECCC--Cce--eEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEE
Q psy17133          6 TPTSIDFVRDESTKMVT-AFDNSACVLFDLET--GKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~-~~~~~~v~i~~~~~--~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~   79 (116)
                      .+..++|+| +++++++ ...++.+.+|++..  ++.  +..+............+..++|+|+|+++ ++...++.|.+
T Consensus       188 ~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v  266 (347)
T 3hfq_A          188 GPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV  266 (347)
T ss_dssp             CEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred             CCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence            567799999 7775555 55688999998863  432  22333221100001347889999999977 45566899999


Q ss_pred             EECCC-C--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         80 FDNVS-G--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        80 ~~~~~-~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      |++.. +  +.+..+..+...+..++|+|++++|++++.
T Consensus       267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~  305 (347)
T 3hfq_A          267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ  305 (347)
T ss_dssp             EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred             EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence            99862 2  444445544556889999999999887764

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.45  E-value=2.1e-11  Score=72.90  Aligned_cols=102  Identities=9%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             ceEEEEccCCCcEEEEee-CCCeEEEEECCCCce------e------EEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-
Q psy17133          7 PTSIDFVRDESTKMVTAF-DNSACVLFDLETGKP------V------VRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-   72 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~------~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-   72 (116)
                      +.++.|+| ++++++++. .++.+.+|++.....      +      .......     ...+..++|+|+++++++++ 
T Consensus       157 ~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~v~~~  230 (361)
T 3scy_A          157 LHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-----GSGPRHLIFNSDGKFAYLINE  230 (361)
T ss_dssp             EEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-----TCCEEEEEECTTSSEEEEEET
T ss_pred             ceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC-----CCCCeEEEEcCCCCEEEEEcC
Confidence            46799999 777665554 578999998864331      1      1222211     34578899999999887776 


Q ss_pred             CCCeEEEEECCCCeEE--EEee---cccccEEEEEECCCCcEEEeee
Q psy17133         73 DDRHIRFFDNVSGKLV--HSMV---AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 ~d~~i~~~~~~~~~~~--~~~~---~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .++.|.+|++.+++..  ..+.   .+......++|+|+|++|+++.
T Consensus       231 ~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~  277 (361)
T 3scy_A          231 IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN  277 (361)
T ss_dssp             TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred             CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence            6899999999877553  2222   1223467999999999987654

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.45  E-value=3.4e-11  Score=71.58  Aligned_cols=110  Identities=14%  Similarity=0.216  Sum_probs=74.0

Q ss_pred             CCCceEEEEccCCCcEEEEee-CCCeEEEEECC-CCc--eeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF-DNSACVLFDLE-TGK--PVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~-~~~--~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      ...+..++|+| ++++|++++ .++.+.+|++. ++.  .+..+......   ......+..++|+|+++++++...++.
T Consensus        85 ~~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~  163 (347)
T 3hfq_A           85 GTPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDK  163 (347)
T ss_dssp             SCCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTE
T ss_pred             CCCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCE
Confidence            45678899999 778777776 68899999986 332  23333221100   001234788999999996666667899


Q ss_pred             EEEEECC-CCeEEEE--eec-ccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNV-SGKLVHS--MVA-HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~-~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.+|++. +++....  +.. ....+..++|+|+|++++.++
T Consensus       164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~  205 (347)
T 3hfq_A          164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG  205 (347)
T ss_dssp             EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe
Confidence            9999998 5554322  222 223678899999999776643

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.44  E-value=2.2e-11  Score=71.70  Aligned_cols=105  Identities=14%  Similarity=0.080  Sum_probs=77.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC--cCc--------------------------------
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ--FGV--------------------------------   50 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~~--------------------------------   50 (116)
                      ..+.++.|+| ++++++++  ++.+++||..+++.+..+....  ...                                
T Consensus       135 ~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~  211 (337)
T 1pby_B          135 RQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDP  211 (337)
T ss_dssp             SSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCT
T ss_pred             CCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccc
Confidence            4567889999 77777776  5789999998887666554332  000                                


Q ss_pred             --------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEEC
Q psy17133         51 --------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVD  104 (116)
Q Consensus        51 --------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~  104 (116)
                                                .+...+..++|+|+++.++++  ++.|.+||+.+++.+..+.. ...+..++|+
T Consensus       212 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s  288 (337)
T 1pby_B          212 ADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVS  288 (337)
T ss_dssp             TSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEEC
T ss_pred             ccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEEC
Confidence                                      001124468999999988887  68999999999988877763 3457899999


Q ss_pred             CCCcEEEeeec
Q psy17133        105 PQGLYILSGTY  115 (116)
Q Consensus       105 ~~~~~l~~~s~  115 (116)
                      |++++|++++.
T Consensus       289 ~dg~~l~~~~~  299 (337)
T 1pby_B          289 TDGSTVWLGGA  299 (337)
T ss_dssp             TTSCEEEEESB
T ss_pred             CCCCEEEEEcC
Confidence            99998887654

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.43  E-value=1.5e-11  Score=73.94  Aligned_cols=89  Identities=18%  Similarity=0.253  Sum_probs=74.2

Q ss_pred             EEEccCCCcEEEEeeC-----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133         10 IDFVRDESTKMVTAFD-----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~-----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      +.|+| +++.++++..           ...|.+||..+++.+..+..+      .  +..++++|+++++++++. +.|.
T Consensus       259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~------~--p~~ia~spdg~~l~v~n~-~~v~  328 (361)
T 2oiz_A          259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR------D--ALSMTIDQQRNLMLTLDG-GNVN  328 (361)
T ss_dssp             EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT------T--CCEEEEETTTTEEEEECS-SCEE
T ss_pred             EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC------C--eeEEEECCCCCEEEEeCC-CeEE
Confidence            68888 5566655432           348999999999999999877      4  899999999999998887 9999


Q ss_pred             EEECCCC--eEEEEeecccccEEEEEECCCCc
Q psy17133         79 FFDNVSG--KLVHSMVAHLDAVTSLAVDPQGL  108 (116)
Q Consensus        79 ~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~  108 (116)
                      +||..++  +.+..+.........++++|+|+
T Consensus       329 v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          329 VYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             EEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             EEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            9999999  88888755666788999999986

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.42  E-value=6.5e-13  Score=85.56  Aligned_cols=101  Identities=13%  Similarity=0.163  Sum_probs=74.7

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIR   78 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~   78 (116)
                      .++.|+| ++++++ .+.++.+++||..+++....+..+...   ...+..++|+|||+.+++++.         ++.|+
T Consensus        19 ~~~~~s~-dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~   93 (719)
T 1z68_A           19 FFPNWIS-GQEYLH-QSADNNIVLYNIETGQSYTILSNRTMK---SVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY   93 (719)
T ss_dssp             CCCEESS-SSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHH---TTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             CccEECC-CCeEEE-EcCCCCEEEEEcCCCcEEEEEcccccc---ccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence            4789999 665554 446899999999988877666554100   013889999999999988776         68999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||+.+++.+.... ....+..++|+|||+.|+.++
T Consensus        94 ~~d~~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~  128 (719)
T 1z68_A           94 IYDLSNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY  128 (719)
T ss_dssp             EEETTTTEECCSSC-CCSSBCCEEECSSTTCEEEEE
T ss_pred             EEECCCCcccccee-cCcccccceECCCCCEEEEEE
Confidence            99999887621111 124578899999999998765

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.40  E-value=1.2e-11  Score=73.15  Aligned_cols=106  Identities=13%  Similarity=0.112  Sum_probs=74.4

Q ss_pred             CceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133          6 TPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----------   74 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----------   74 (116)
                      .+..+.|+| +++.+ ++...++.|.+||..+++.+..+............+..++++|+++.+++++.+          
T Consensus        44 ~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~  122 (349)
T 1jmx_B           44 GPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV  122 (349)
T ss_dssp             SSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred             CCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence            578899999 66655 455578999999999888777776431000000136789999999999888755          


Q ss_pred             --CeEEEEECCCCeE---EEEeecccccEEEEEECCCCcEEEeee
Q psy17133         75 --RHIRFFDNVSGKL---VHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 --~~i~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                        +.|.+||+.+++.   +..+. +...+.+++|+|+++ ++.++
T Consensus       123 ~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~  165 (349)
T 1jmx_B          123 KPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG  165 (349)
T ss_dssp             CCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES
T ss_pred             CCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc
Confidence              8999999987443   33333 333578899999999 54443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.38  E-value=1.6e-11  Score=79.30  Aligned_cols=101  Identities=5%  Similarity=0.026  Sum_probs=73.3

Q ss_pred             CceEEEEccCCCcEEEEeeCC-C----eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe----
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN-S----ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH----   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~-~----~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~----   76 (116)
                      .+..+.|+| ++++|+.+... +    .|++||+.+++.+......       ..+..++|+||++.++.+..+..    
T Consensus       126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-------~~~~~~~wspDg~~l~~~~~~~~~~~~  197 (710)
T 2xdw_A          126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-------VKFSCMAWTHDGKGMFYNAYPQQDGKS  197 (710)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-------ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred             EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-------cccceEEEEeCCCEEEEEEECCccccc
Confidence            467889999 78888766542 2    8999999988766533222       23678999999998888877654    


Q ss_pred             ------------EEEEECCCCeE--EEEee--cccccEEEEEECCCCcEEEeee
Q psy17133         77 ------------IRFFDNVSGKL--VHSMV--AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 ------------i~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                                  |++|++.+++.  ...+.  .+...+..+.|+|||++|+..+
T Consensus       198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~  251 (710)
T 2xdw_A          198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (710)
T ss_dssp             SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence                        99999987652  22222  2344578899999999988665

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.37  E-value=5e-12  Score=81.51  Aligned_cols=102  Identities=14%  Similarity=0.107  Sum_probs=72.7

Q ss_pred             CceEEEEccCCCcEEEEe-----eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe----
Q psy17133          6 TPTSIDFVRDESTKMVTA-----FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH----   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~-----~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~----   76 (116)
                      .+..+.|+| ++++|+.+     +.+..|++||+.+++.+.  ..+..    ......++|+||++.++..+.+..    
T Consensus       122 ~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~----~~~~~~~~wspDg~~l~~~~~d~~~~~~  194 (695)
T 2bkl_A          122 SLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE----GGKYATPKWTPDSKGFYYEWLPTDPSIK  194 (695)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS----CCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred             EEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC----cccccceEEecCCCEEEEEEecCCCCCc
Confidence            477899999 78888743     345689999999887541  11110    112267899999999988887665    


Q ss_pred             ---------EEEEECCCCe----EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         77 ---------IRFFDNVSGK----LVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 ---------i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                               |++|++.++.    .+.....+...+..+.|+|||++|+..+
T Consensus       195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~  245 (695)
T 2bkl_A          195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI  245 (695)
T ss_dssp             GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred             cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence                     9999998775    2322223445788999999999888655

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.36  E-value=4e-11  Score=71.17  Aligned_cols=97  Identities=12%  Similarity=0.067  Sum_probs=71.0

Q ss_pred             CceEEEEccCCCcEEEEeeCC---C--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-------
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN---S--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-------   73 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~---~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------   73 (116)
                      .+..+.|+| +++.|+..+.+   +  .|.+|++.+++........       . +..+.|+|+++.++..+.       
T Consensus        60 ~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-------~-~~~~~wspdg~~l~~~~~~~~~~~~  130 (347)
T 2gop_A           60 NATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-------N-IRSLEWNEDSRKLLIVGFKRREDED  130 (347)
T ss_dssp             SCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-------E-EEEEEECTTSSEEEEEEECCCC---
T ss_pred             cCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-------C-ccceeECCCCCEEEEEEccCCCcCC
Confidence            467789999 77888776543   3  4778888877655444433       3 889999999998877653       


Q ss_pred             --------------------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         74 --------------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 --------------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                                          ...|.+|++.+++.+..+.. . .+..+.|+|+| ++++++
T Consensus       131 ~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~  188 (347)
T 2gop_A          131 FIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVP  188 (347)
T ss_dssp             ------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEE
T ss_pred             cEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEe
Confidence                                25799999998887444544 3 67889999999 776654

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.36  E-value=9.1e-12  Score=80.81  Aligned_cols=99  Identities=9%  Similarity=0.120  Sum_probs=73.3

Q ss_pred             eEEEEccCCCcEEEEeeCC---------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEE
Q psy17133          8 TSIDFVRDESTKMVTAFDN---------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIR   78 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~   78 (116)
                      ..+.|+| ++++|+.++.+         +.+.+||+.+++.. .+..+      ...+...+|+|||+.|+.+. ++.|+
T Consensus        65 ~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~------~~~~~~~~~SPdG~~la~~~-~~~i~  135 (740)
T 4a5s_A           65 NDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERI------PNNTQWVTWSPVGHKLAYVW-NNDIY  135 (740)
T ss_dssp             CEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCC------CTTEEEEEECSSTTCEEEEE-TTEEE
T ss_pred             cceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccC------CCcceeeEECCCCCEEEEEE-CCeEE
Confidence            3478999 78888887764         56779999987643 34444      45789999999999998885 68999


Q ss_pred             EEECCCCeEEEEee-cccccE-----------------EEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSGKLVHSMV-AHLDAV-----------------TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~l~~~s~  115 (116)
                      +|+..+++..+... ++...+                 ..+.|+|||+.|+.++.
T Consensus       136 ~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~  190 (740)
T 4a5s_A          136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF  190 (740)
T ss_dssp             EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred             EEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEE
Confidence            99998887654322 222222                 34899999999998754

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.36  E-value=7.1e-11  Score=70.93  Aligned_cols=107  Identities=20%  Similarity=0.221  Sum_probs=73.5

Q ss_pred             CceEEEEccCCCcE--EEEee-------------CCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE
Q psy17133          6 TPTSIDFVRDESTK--MVTAF-------------DNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI   69 (116)
Q Consensus         6 ~v~~~~~~~~~~~~--l~~~~-------------~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~   69 (116)
                      .+..+.|+| ++++  ++++.             .++.+.+|++. +++....+....  ..+...+..++|+|+|++++
T Consensus        84 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~spdG~~l~  160 (365)
T 1jof_A           84 HPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE--YQENTGIHGMVFDPTETYLY  160 (365)
T ss_dssp             SGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE--CCTTCCEEEEEECTTSSEEE
T ss_pred             CCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE--eCCCCcceEEEECCCCCEEE
Confidence            356678899 6774  44553             68899999997 465443333100  00035689999999999887


Q ss_pred             EEe-CCCeEEEEECC-CCeEEE--Eee--cccccEEEEEECCCCcEEEeeec
Q psy17133         70 TAH-DDRHIRFFDNV-SGKLVH--SMV--AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        70 ~~~-~d~~i~~~~~~-~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++. .++.|.+|++. +++...  .+.  .+...+..++|+|+|+++++++.
T Consensus       161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~  212 (365)
T 1jof_A          161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME  212 (365)
T ss_dssp             EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred             EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence            765 46899999998 676532  232  12456899999999999887653

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.32  E-value=8.8e-11  Score=70.60  Aligned_cols=96  Identities=14%  Similarity=0.070  Sum_probs=71.9

Q ss_pred             EEEccCCCcEEEEeeC-CC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133         10 IDFVRDESTKMVTAFD-NS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~-~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ..|+| +++.|+..+. ++  .+.+||+.+++.......+      ...+....|+|+++.|+....++.+++||+.+++
T Consensus        41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~------~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~  113 (388)
T 3pe7_A           41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGR------GDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE  113 (388)
T ss_dssp             CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSS------CBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred             ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCC------CCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence            67999 7888877775 55  4888999887765555444      3344467899999999999999999999999998


Q ss_pred             EEEEeecccccEEEE--EECCCCcEEEe
Q psy17133         87 LVHSMVAHLDAVTSL--AVDPQGLYILS  112 (116)
Q Consensus        87 ~~~~~~~~~~~v~~~--~~~~~~~~l~~  112 (116)
                      .......+...+...  .++|+++.++.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~  141 (388)
T 3pe7_A          114 ENVVYQVPAEWVGYGTWVANSDCTKLVG  141 (388)
T ss_dssp             EEEEEECCTTEEEEEEEEECTTSSEEEE
T ss_pred             ceeeeechhhcccccceeECCCCCeecc
Confidence            776666555544333  34899998863

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.31  E-value=4.4e-11  Score=71.82  Aligned_cols=103  Identities=16%  Similarity=0.160  Sum_probs=73.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCceeEEEecCCcCcCCCCceeEEEEcCCCCE--EEEEe---------
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPL--TITAH---------   72 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~---------   72 (116)
                      ..+..++|+| ++++|++++.+ .+.+|++. +++.........     .+.+..++++|+++.  ++++.         
T Consensus        40 ~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~-----~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~  112 (365)
T 1jof_A           40 EPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI-----GGHPRANDADTNTRAIFLLAAKQPPYAVYAN  112 (365)
T ss_dssp             CCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC-----CSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred             CCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeec-----CCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence            3678899999 78888888877 99999987 676543332110     123456889999984  44543         


Q ss_pred             ----CCCeEEEEECC-CCeEEEEee----cccccEEEEEECCCCcEEEeee
Q psy17133         73 ----DDRHIRFFDNV-SGKLVHSMV----AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 ----~d~~i~~~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                          .++.+.+|++. .++....+.    .+...+..++|+|+|++++++.
T Consensus       113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~  163 (365)
T 1jof_A          113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD  163 (365)
T ss_dssp             EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred             eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence                68999999997 466544333    2345789999999999887654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.31  E-value=1.1e-09  Score=64.83  Aligned_cols=103  Identities=12%  Similarity=0.062  Sum_probs=78.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----CeEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----RHIRFF   80 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----~~i~~~   80 (116)
                      ..+.++.|+| ++++++++..++.|.+||..+++........      ...+.+++++|+++++++...+    +.|.+|
T Consensus        45 ~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~  117 (333)
T 2dg1_A           45 LQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH------KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA  117 (333)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS------SSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred             ccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCC------CCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence            4567899998 7787777778899999999877655444333      3568999999999988877666    689999


Q ss_pred             ECCCCeEEEEee--cccccEEEEEECCCCcEEEeee
Q psy17133         81 DNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.++++....+.  .....+..++++|+++++++..
T Consensus       118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~  153 (333)
T 2dg1_A          118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF  153 (333)
T ss_dssp             CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred             eCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence            998776653332  2334688999999999887653

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.27  E-value=1.8e-09  Score=62.62  Aligned_cols=101  Identities=13%  Similarity=0.233  Sum_probs=76.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-eEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-HIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-~i~~~~~~   83 (116)
                      ..+.+++++| +++.+++...++.|++|+.. ++.+..+.....    ...+..+++++++.++++...++ .|.+|+. 
T Consensus       164 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~----~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-  236 (286)
T 1q7f_A          164 EFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI----TNYPIGVGINSNGEILIADNHNNFNLTIFTQ-  236 (286)
T ss_dssp             SSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT----SCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred             CCcEEEEECC-CCCEEEEECCCCEEEEEcCC-CCEEEEEccCCc----cCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence            4578899999 77877777778999999974 666666644310    24678999999999888887776 9999995 


Q ss_pred             CCeEEEEeeccc--ccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAHL--DAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~  112 (116)
                      +++.+..+..+.  ..+..++++|+|+++++
T Consensus       237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs  267 (286)
T 1q7f_A          237 DGQLISALESKVKHAQCFDVALMDDGSVVLA  267 (286)
T ss_dssp             TSCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred             CCCEEEEEcccCCCCcceeEEECCCCcEEEE
Confidence            466666665433  24779999999987776

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.26  E-value=3e-10  Score=67.43  Aligned_cols=104  Identities=17%  Similarity=0.233  Sum_probs=78.3

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-------eCCCeEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-------HDDRHIR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~d~~i~   78 (116)
                      .+..++++|+++.++++...++.|++|+..+++.+..+.....    ...+..++++| +..+.+.       ..+..++
T Consensus       197 ~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~----~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~  271 (329)
T 3fvz_A          197 VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF----GRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGF  271 (329)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT----TTCEEEEEEET-TEEEEEECCCCTTCSCCCCEE
T ss_pred             CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc----CCCcceeeecC-CEEEEeCCCEEeccCCCcEEE
Confidence            4788999994377778878899999999988888888754321    35678899999 4333333       3345899


Q ss_pred             EEECCCCeEEEEee---cccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMV---AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +|+..+++.+..+.   .+...+..++++|+|..+++..
T Consensus       272 ~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~  310 (329)
T 3fvz_A          272 VMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDA  310 (329)
T ss_dssp             EEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred             EEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence            99999999988874   4556789999999997666644

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.25  E-value=6.3e-10  Score=67.62  Aligned_cols=91  Identities=12%  Similarity=0.046  Sum_probs=67.6

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      |..++|   +++.|+++ .++.|++||+.+.........+      ...+..+.+.+.  -++.+..||.+.+||++++.
T Consensus        90 V~~l~f---d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~------~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~  157 (388)
T 1xip_A           90 VIFVCF---HGDQVLVS-TRNALYSLDLEELSEFRTVTSF------EKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS  157 (388)
T ss_dssp             EEEEEE---ETTEEEEE-ESSEEEEEESSSTTCEEEEEEC------SSCEEEEEECSS--EEEEEETTSEEEEEETTTCC
T ss_pred             eeEEEE---CCCEEEEE-cCCcEEEEEchhhhccCcccee------ecceeeEEecCC--CEEEEECCCCEEEEEccCCc
Confidence            889999   44788877 7899999999876655555555      345666665543  38888999999999999877


Q ss_pred             EEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         87 LVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        87 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ...    +...|++++|+|+|  ++.+..
T Consensus       158 ~~~----~~~~Vs~v~WSpkG--~~vg~~  180 (388)
T 1xip_A          158 TKQ----LAQNVTSFDVTNSQ--LAVLLK  180 (388)
T ss_dssp             EEE----EEESEEEEEECSSE--EEEEET
T ss_pred             ccc----ccCCceEEEEcCCc--eEEEEc
Confidence            654    33579999999999  344443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.24  E-value=2.3e-10  Score=73.25  Aligned_cols=103  Identities=11%  Similarity=0.056  Sum_probs=71.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCC--------CeEEEEECC-CC---ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDN--------SACVLFDLE-TG---KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~--------~~v~i~~~~-~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      ..+..+.|+| ++++|+..+.+        ..|++||+. ++   +.......+      ...+..+.|+|||++++++.
T Consensus       188 ~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~------~~~~~~~~~spdg~l~~~~~  260 (662)
T 3azo_A          188 RFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP------EEAIAQAEWAPDGSLIVATD  260 (662)
T ss_dssp             SEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET------TBCEEEEEECTTSCEEEEEC
T ss_pred             CcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC------CceEcceEECCCCeEEEEEC
Confidence            4566789999 78888776643        479999998 56   333333333      35688999999999777887


Q ss_pred             CCC--eEEEEECCCCeEEEEeeccccc--------EEEEEECCCCcEEEeee
Q psy17133         73 DDR--HIRFFDNVSGKLVHSMVAHLDA--------VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 ~d~--~i~~~~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~s  114 (116)
                      .++  .|.+|+..+++.......+...        +..++|+|+++++++++
T Consensus       261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~  312 (662)
T 3azo_A          261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG  312 (662)
T ss_dssp             TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred             CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence            777  6777777677655443322221        45788899999887764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.23  E-value=2e-09  Score=62.84  Aligned_cols=100  Identities=13%  Similarity=0.200  Sum_probs=74.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECC-CCce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLE-TGKP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      ..+..++|+| +++.+++...++.|.+|++. +++.   ...+...      ...+..++++++|.++++.  ++.|.+|
T Consensus       172 ~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~p~~i~~d~~G~l~v~~--~~~v~~~  242 (296)
T 3e5z_A          172 VKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE------PGKTDGLRVDAGGLIWASA--GDGVHVL  242 (296)
T ss_dssp             SSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS------SSCCCSEEEBTTSCEEEEE--TTEEEEE
T ss_pred             CCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC------CCCCCeEEECCCCCEEEEc--CCeEEEE
Confidence            4567899999 77777766778899999986 4544   2333222      3457789999999876666  7899999


Q ss_pred             ECCCCeEEEEeecccccEEEEEE-CCCCcEEEeeec
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAV-DPQGLYILSGTY  115 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~s~  115 (116)
                      +.. ++.+..+..+.. +.+++| .|+++.|+.++.
T Consensus       243 ~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~  276 (296)
T 3e5z_A          243 TPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS  276 (296)
T ss_dssp             CTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred             CCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcC
Confidence            986 777777776666 889999 689888876654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.22  E-value=5.1e-09  Score=60.71  Aligned_cols=103  Identities=13%  Similarity=0.250  Sum_probs=77.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.+++++| +++.+++...++.|.+|+.. ++.+..+.....    ...+..++++|++.++++...++.|.+|+.. 
T Consensus       121 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-  193 (286)
T 1q7f_A          121 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-  193 (286)
T ss_dssp             SCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-
T ss_pred             CCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCc----cCCcEEEEECCCCCEEEEECCCCEEEEEcCC-
Confidence            4578899999 77877777778899999964 666666542211    3468899999999988888889999999974 


Q ss_pred             CeEEEEeecc--cccEEEEEECCCCcEEEeee
Q psy17133         85 GKLVHSMVAH--LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.+..+...  ...+..++++++|+++++..
T Consensus       194 g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~  225 (286)
T 1q7f_A          194 GQYLRQIGGEGITNYPIGVGINSNGEILIADN  225 (286)
T ss_dssp             CCEEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred             CCEEEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence            6666666433  25688999999999887764

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.21  E-value=1.8e-09  Score=64.87  Aligned_cols=100  Identities=9%  Similarity=-0.042  Sum_probs=74.1

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeE--EEEcCCCCEEEEEe------------
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINR--VVCHPTLPLTITAH------------   72 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~------------   72 (116)
                      +....|+| +++.|+....+..+++||+.+++....+..+      ...+..  ..++|+++.++...            
T Consensus        83 ~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~------~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~  155 (388)
T 3pe7_A           83 TFGGFLSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVP------AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDW  155 (388)
T ss_dssp             SSSCEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECC------TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred             ccceEEcC-CCCEEEEEeCCCeEEEEECCCCcceeeeech------hhcccccceeECCCCCeeccccccCccccccccc
Confidence            34678999 8899999988899999999988876666554      233333  33489998877432            


Q ss_pred             ----------CCCeEEEEECCCCeEEEEeecccccEEEEEECC-CCcEEEeee
Q psy17133         73 ----------DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP-QGLYILSGT  114 (116)
Q Consensus        73 ----------~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s  114 (116)
                                .+..|.+||+.+++..... .+...+..+.|+| +|+.|+..+
T Consensus       156 ~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~  207 (388)
T 3pe7_A          156 KKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCH  207 (388)
T ss_dssp             HHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEE
T ss_pred             chhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEE
Confidence                      3468999999988765544 3556788999999 999887654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.20  E-value=2.2e-09  Score=68.22  Aligned_cols=90  Identities=16%  Similarity=0.100  Sum_probs=73.8

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC--CCeEEEEeeccc
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV--SGKLVHSMVAHL   95 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~--~~~~~~~~~~~~   95 (116)
                      ..+++...++.|.++|..+++.+..+...       ..+..+.++||++++++++.++.|.+||+.  +++.+..+.. .
T Consensus       168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g-------~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G  239 (567)
T 1qks_A          168 LFSVTLRDAGQIALIDGSTYEIKTVLDTG-------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-G  239 (567)
T ss_dssp             EEEEEETTTTEEEEEETTTCCEEEEEECS-------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-C
T ss_pred             eEEEEeCCCCeEEEEECCCCeEEEEEeCC-------CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-C
Confidence            45566667899999999999988888755       246789999999999999999999999995  7887777764 3


Q ss_pred             ccEEEEEEC----CCCcEEEeeec
Q psy17133         96 DAVTSLAVD----PQGLYILSGTY  115 (116)
Q Consensus        96 ~~v~~~~~~----~~~~~l~~~s~  115 (116)
                      .....++|+    |+|+++++++.
T Consensus       240 ~~P~~ia~s~~~~pDGk~l~v~n~  263 (567)
T 1qks_A          240 SEARSIETSKMEGWEDKYAIAGAY  263 (567)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEE
T ss_pred             CCCceeEEccccCCCCCEEEEEEc
Confidence            346889999    69999987764

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.20  E-value=2.6e-09  Score=62.32  Aligned_cols=99  Identities=10%  Similarity=0.058  Sum_probs=76.4

Q ss_pred             CCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ....++.|+| +++ .++++..++.|..|+..++  ...+...      ...+..++++|+++++++...++.|.+||..
T Consensus        28 ~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~------~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~   98 (296)
T 3e5z_A           28 TWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHP------SHHQNGHCLNKQGHLIACSHGLRRLERQREP   98 (296)
T ss_dssp             SSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESS------CSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred             ccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECC------CCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence            4567899999 666 7777888899999999866  5555554      4568999999999988887778999999998


Q ss_pred             CCeEEEEeecc----cccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAH----LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~  112 (116)
                      +++........    ...+..++++|+|+++++
T Consensus        99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt  131 (296)
T 3e5z_A           99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS  131 (296)
T ss_dssp             TCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred             CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence            88765443221    124567999999998886

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.19  E-value=1.3e-09  Score=66.31  Aligned_cols=94  Identities=12%  Similarity=0.087  Sum_probs=73.0

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.++.+.+ . + ++++..+|.+.+||+.+++... .         ...+.+++|+|+|  ++.+..||.+++|+..
T Consensus       126 ~~~v~~i~~~~-p-~-~av~~~dG~L~v~dl~~~~~~~-~---------~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~  190 (388)
T 1xip_A          126 EKPVFQLKNVN-N-T-LVILNSVNDLSALDLRTKSTKQ-L---------AQNVTSFDVTNSQ--LAVLLKDRSFQSFAWR  190 (388)
T ss_dssp             SSCEEEEEECS-S-E-EEEEETTSEEEEEETTTCCEEE-E---------EESEEEEEECSSE--EEEEETTSCEEEEEEE
T ss_pred             ecceeeEEecC-C-C-EEEEECCCCEEEEEccCCcccc-c---------cCCceEEEEcCCc--eEEEEcCCcEEEEcCC
Confidence            34566777665 2 3 7778899999999998776542 1         2369999999999  6778899999999988


Q ss_pred             CCeE--EEEe------e---cccccEEEEEECCCCcEEEe
Q psy17133         84 SGKL--VHSM------V---AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .++.  ...+      .   .|...|.++.|.++++++++
T Consensus       191 ~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          191 NGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             CccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            7775  4455      2   25678999999999999876

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.18  E-value=4.8e-09  Score=62.25  Aligned_cols=105  Identities=11%  Similarity=0.066  Sum_probs=78.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCC------------------------CeEEEEECCCCceeEEEecCCcCcCCCCceeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDN------------------------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRV   59 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~------------------------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~   59 (116)
                      .+.+.+++++| +++++++...+                        +.|.+||..+++.+..+....     -..+..+
T Consensus        23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~~p~gi   96 (329)
T 3fvz_A           23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-----FYLPHGL   96 (329)
T ss_dssp             CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-----CSSEEEE
T ss_pred             cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-----cCCceEE
Confidence            46789999999 78888877666                        479999998888766654221     3468899


Q ss_pred             EEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEee---------cccccEEEEEECC-CCcEEEeee
Q psy17133         60 VCHPTLPLTITAHDDRHIRFFDNVSGK-LVHSMV---------AHLDAVTSLAVDP-QGLYILSGT  114 (116)
Q Consensus        60 ~~~~~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~s  114 (116)
                      +++|++.++++...++.|++|+..... .+..+.         .+-..+..++++| +++++++.+
T Consensus        97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~  162 (329)
T 3fvz_A           97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG  162 (329)
T ss_dssp             EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred             EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence            999999988888889999999976442 344442         2233688999999 788877764

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.18  E-value=4.1e-09  Score=61.38  Aligned_cols=91  Identities=11%  Similarity=0.092  Sum_probs=75.2

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-c
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-L   95 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-~   95 (116)
                      ++.|++++.++.|++||.++++.+.++..+.     ...+..+.+.|+|++++  +.++.|..||. +++.+..+... .
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~   76 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-----GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG   76 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCT-----TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-----cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC
Confidence            4888999999999999998999999988762     13578999999999888  45788999998 79988888754 2


Q ss_pred             ccEEEEEECCCCcEEEeeec
Q psy17133         96 DAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        96 ~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ..+.++.+.++|+++++.+.
T Consensus        77 ~~~~~~~~~~dG~~lv~~~~   96 (276)
T 3no2_A           77 CEMQTARILPDGNALVAWCG   96 (276)
T ss_dssp             CEEEEEEECTTSCEEEEEES
T ss_pred             ccccccEECCCCCEEEEecC
Confidence            46788899999999987653

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.15  E-value=7.2e-09  Score=60.71  Aligned_cols=104  Identities=13%  Similarity=0.079  Sum_probs=75.7

Q ss_pred             CceEEEEccCCCcEE-EEeeCCCeEEEEEC--CCCcee--EEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          6 TPTSIDFVRDESTKM-VTAFDNSACVLFDL--ETGKPV--VRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~--~~~~~~--~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      ....++|+| +++.+ ++.+.++.|.+|++  .++...  ..+. ....    ...+..++++++|.+.++....+.|..
T Consensus       150 ~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~----~~~p~g~~~d~~G~lwva~~~~~~v~~  224 (297)
T 3g4e_A          150 ISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE----EQIPDGMCIDAEGKLWVACYNGGRVIR  224 (297)
T ss_dssp             BEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG----GCEEEEEEEBTTSCEEEEEETTTEEEE
T ss_pred             cccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC----CCCCCeeEECCCCCEEEEEcCCCEEEE
Confidence            356789999 66655 55566789999986  455431  1121 1100    245788999999998888888889999


Q ss_pred             EECCCCeEEEEeecccccEEEEEEC-CCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~s  114 (116)
                      ||.++++.+..+......+++++|. |+++.|+.++
T Consensus       225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             ECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             EcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence            9999899988887666789999998 8888765443

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.14  E-value=1.4e-09  Score=70.83  Aligned_cols=101  Identities=5%  Similarity=0.009  Sum_probs=69.3

Q ss_pred             CceEEEEccCCCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----   75 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----   75 (116)
                      .+..+.|+| ++++|+.+..+     ..|++||+.+++.+.... .      ...+..++|+|| +.++.+..+.     
T Consensus       164 ~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~------~~~~~~~~wspD-~~l~~~~~~~~~~~~  234 (741)
T 1yr2_A          164 ALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-K------WVKFSGLAWLGN-DALLYSRFAEPKEGQ  234 (741)
T ss_dssp             EEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-E------EEESCCCEESTT-SEEEEEECCCC----
T ss_pred             EEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-C------CceeccEEEECC-CEEEEEEecCccccc
Confidence            467789999 78888776532     469999999887654321 1      112357899999 8887776544     


Q ss_pred             ---------eEEEEECCCCeE--EEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133         76 ---------HIRFFDNVSGKL--VHSMV--AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        76 ---------~i~~~~~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                               .|++|++.++..  ...+.  .+...+..+.|+|||++|+..+.
T Consensus       235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~  287 (741)
T 1yr2_A          235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS  287 (741)
T ss_dssp             ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred             ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence                     388999876652  22222  22235788999999998886653

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.12  E-value=3.1e-09  Score=63.89  Aligned_cols=99  Identities=9%  Similarity=-0.014  Sum_probs=66.7

Q ss_pred             CceEEEEccCCCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEe-------
Q psy17133          6 TPTSIDFVRDESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAH-------   72 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~-------   72 (116)
                      .+..+.|+| +++.|+..+.+     +.|++||+.+++........        ... +.|+| ++++++..+       
T Consensus       239 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--------~~~-~~~s~~dg~~l~~~~~~~p~~~  308 (396)
T 3c5m_A          239 SCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--------PCS-HLMSNFDGSLMVGDGCDAPVDV  308 (396)
T ss_dssp             EEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--------SEE-EEEECSSSSEEEEEECCC----
T ss_pred             cccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--------CCC-CCccCCCCceEEEecCCcceee
Confidence            366789999 77766665432     44999999877654332222        123 88999 999887754       


Q ss_pred             ---------CCCeEEEEECCCCeEEEEeecccc-----------cEEEEEECCCCcEEEeeec
Q psy17133         73 ---------DDRHIRFFDNVSGKLVHSMVAHLD-----------AVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        73 ---------~d~~i~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~~~s~  115 (116)
                               .+..|.+||+.+++... +..+..           .+..++|+|+|+.|+.++.
T Consensus       309 ~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~  370 (396)
T 3c5m_A          309 ADADSYNIENDPFLYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD  370 (396)
T ss_dssp             ------CCCCCCEEEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred             ccccccccCCCCcEEEEecccCceEE-ccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence                     34789999998776533 332332           2456789999998887653

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.12  E-value=1.5e-09  Score=65.35  Aligned_cols=91  Identities=11%  Similarity=0.080  Sum_probs=69.7

Q ss_pred             CCcEEEEee------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----------CCeEEE
Q psy17133         16 ESTKMVTAF------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----------DRHIRF   79 (116)
Q Consensus        16 ~~~~l~~~~------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------d~~i~~   79 (116)
                      +++++++..      .++.+++||..+++.+..+...      .. . .++++|+++.+++++.          ++.|.+
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g------~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v   85 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA------FN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV   85 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC------EE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC------CC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence            445565543      3679999999999888887765      22 3 8999999999988763          567999


Q ss_pred             EECCCCeEEEEeecc------cccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAH------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ||..+.+.+..+...      ......++++|+|++|++++
T Consensus        86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n  126 (361)
T 2oiz_A           86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN  126 (361)
T ss_dssp             EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred             EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence            999998888776532      23456789999999998765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.11  E-value=9.6e-09  Score=60.95  Aligned_cols=95  Identities=11%  Similarity=-0.006  Sum_probs=66.4

Q ss_pred             CCCceEEEEccCCCcEEEEee---------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAF---------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~---------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      ...+....+   +++.++...         .+..+.+|++.+++.. .+  .        .+..+.|+|||+.++..+.+
T Consensus        14 ~~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l--~--------~~~~~~~SpDg~~la~~~~~   79 (347)
T 2gop_A           14 FAYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI--E--------NATMPRISPDGKKIAFMRAN   79 (347)
T ss_dssp             SCEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE--E--------SCEEEEECTTSSEEEEEEEE
T ss_pred             eEEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec--c--------cCCCeEECCCCCEEEEEEec
Confidence            344566666   345555432         2567889999877643 33  2        36789999999988876643


Q ss_pred             ---C--eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         75 ---R--HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ---~--~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                         +  .|.+|++.+++........ . +..++|+|+++.|+.++
T Consensus        80 ~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~  122 (347)
T 2gop_A           80 EEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVG  122 (347)
T ss_dssp             TTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEE
T ss_pred             cCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEE
Confidence               3  4888898888776655433 3 89999999999988765

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.07  E-value=1.4e-08  Score=58.22  Aligned_cols=103  Identities=16%  Similarity=0.112  Sum_probs=73.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++.+++ +++.+++...++.|.+|+.............      ...+..+++++++.++++...++.|.+|+...
T Consensus       150 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~  222 (270)
T 1rwi_B          150 NDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTD------ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  222 (270)
T ss_dssp             CSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSS------CCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred             CCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccC------CCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence            3578899999 6777776667789999998765433222222      24678999999998777777788999999875


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .........+...+..++++++|+.+++..
T Consensus       223 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~  252 (270)
T 1rwi_B          223 TTSTVLPFTGLNTPLAVAVDSDRTVYVADR  252 (270)
T ss_dssp             SCCEECCCCSCSCEEEEEECTTCCEEEEEG
T ss_pred             CcceeeccCCCCCceeEEECCCCCEEEEEC
Confidence            544332222334688999999998776654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.06  E-value=1.1e-09  Score=64.73  Aligned_cols=101  Identities=12%  Similarity=0.134  Sum_probs=76.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.++.|++ +...++....++.++.|   .++....+..+      ...+.+++|+|++++++++..++.|.+||.+
T Consensus         5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~   74 (333)
T 2dg1_A            5 QQDLPTLFYSG-KSNSAVPIISESELQTI---TAEPWLEISKK------GLQLEGLNFDRQGQLFLLDVFEGNIFKINPE   74 (333)
T ss_dssp             -CCCCBCCSCG-GGGCSSCCCCGGGSCEE---ECEEEEEEESS------CCCEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred             ccccceeeecC-CccceeEEeecccCccc---ccceeEEEecc------CccccCcEECCCCCEEEEECCCCEEEEEeCC
Confidence            45678889998 66666665667778888   34455566555      3467899999999988888889999999998


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +++.......+...+..++++|+++++++..
T Consensus        75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~  105 (333)
T 2dg1_A           75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYL  105 (333)
T ss_dssp             TCCEEEEEECSSSSEEEEEECTTSCEEEEEC
T ss_pred             CCcEEEEeeCCCCCcceEEECCCCcEEEEeC
Confidence            8876655434556799999999999877653

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.04  E-value=2.2e-08  Score=58.57  Aligned_cols=102  Identities=16%  Similarity=0.216  Sum_probs=72.7

Q ss_pred             CceEEEEc----cCCCcEEEE-eeCCCeEEEEECC-CCce-----eEEEecCCcCcCCC-CceeEEEEcCCCCEEEEEeC
Q psy17133          6 TPTSIDFV----RDESTKMVT-AFDNSACVLFDLE-TGKP-----VVRIDSSQFGVSGG-GGINRVVCHPTLPLTITAHD   73 (116)
Q Consensus         6 ~v~~~~~~----~~~~~~l~~-~~~~~~v~i~~~~-~~~~-----~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~   73 (116)
                      .+..+.|+    | +++.++. ...++.|.+|+.. +++.     ...+..+      . ..+..+++++++.++++...
T Consensus       173 ~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~------~~~~p~~i~~d~~G~l~v~~~~  245 (314)
T 1pjx_A          173 FPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT------HEGGADGMDFDEDNNLLVANWG  245 (314)
T ss_dssp             SEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC------SSCEEEEEEEBTTCCEEEEEET
T ss_pred             CcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC------CCCCCCceEECCCCCEEEEEcC
Confidence            45678888    8 6655544 4567899999976 3432     1122222      2 45788999999998888878


Q ss_pred             CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         74 DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ++.|.+|+.++++.+..+..+...+.+++|+|+++.|..++
T Consensus       246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~  286 (314)
T 1pjx_A          246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE  286 (314)
T ss_dssp             TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe
Confidence            89999999987776666655556789999999999555443

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.02  E-value=1.6e-09  Score=65.08  Aligned_cols=81  Identities=15%  Similarity=0.061  Sum_probs=57.5

Q ss_pred             ceEEEEccCCCcEEEEeeC---CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFD---NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +..++|+| ++++|+....   +..+.+|+..+++........      ......+.|+|+++.++..+.++.|++|++.
T Consensus        38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~------~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~  110 (396)
T 3c5m_A           38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK------GDNTFGGFISTDERAFFYVKNELNLMKVDLE  110 (396)
T ss_dssp             TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSS------CBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred             eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCC------CCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence            67788999 7787766643   347888998877643332222      1223347899999999999999999999999


Q ss_pred             CCeEEEEeecc
Q psy17133         84 SGKLVHSMVAH   94 (116)
Q Consensus        84 ~~~~~~~~~~~   94 (116)
                      +++.......+
T Consensus       111 ~~~~~~~~~~~  121 (396)
T 3c5m_A          111 TLEEQVIYTVD  121 (396)
T ss_dssp             TCCEEEEEECC
T ss_pred             CCCcEEEEecc
Confidence            88766555433

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.99  E-value=2.5e-07  Score=55.24  Aligned_cols=110  Identities=11%  Similarity=-0.004  Sum_probs=75.2

Q ss_pred             CCCceEEEEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe---CC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH---DD   74 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~---~d   74 (116)
                      ...+..+.+++ +++++++...     ..+|.+||+.+++.+..+........+...+..+++++++. .+++-.   .+
T Consensus        66 ~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~  144 (343)
T 2qe8_A           66 FDTVLGIKSDG-NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK  144 (343)
T ss_dssp             CSCEEEEEECS-SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred             eeEeeEEEEcC-CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence            35688999999 6666555433     57899999998887776654311111124568999998654 445544   57


Q ss_pred             CeEEEEECCCCeEEEEeeccc-----------------------------ccEEEEEECCCCcEEEeee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHL-----------------------------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.|.+||+.+++..+.+..|.                             ..+..++|+|+++.|+.+.
T Consensus       145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~  213 (343)
T 2qe8_A          145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSP  213 (343)
T ss_dssp             CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEE
T ss_pred             CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEe
Confidence            899999998887766553210                             1357899999999887654

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=98.99  E-value=7.2e-08  Score=56.14  Aligned_cols=97  Identities=14%  Similarity=0.074  Sum_probs=78.3

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      ..+.+.+ +++++++...++.|..||.. ++.+..+...       ..+..+...+++.++++...++.|..+|.++|+.
T Consensus       128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~  198 (276)
T 3no2_A          128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI  198 (276)
T ss_dssp             SCCEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred             cCceECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence            3455677 78899998899999999998 9988888765       2355677789999999888888999999999999


Q ss_pred             EEEeeccc------ccEEEEEECCCCcEEEee
Q psy17133         88 VHSMVAHL------DAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        88 ~~~~~~~~------~~v~~~~~~~~~~~l~~~  113 (116)
                      +..+....      ..+..++..++|+.+++.
T Consensus       199 ~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          199 VRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             EEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            98886432      236788888999988876

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.98  E-value=6.9e-08  Score=58.52  Aligned_cols=93  Identities=12%  Similarity=-0.028  Sum_probs=69.3

Q ss_pred             ccCCCcEEEEeeC--CC---eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeE
Q psy17133         13 VRDESTKMVTAFD--NS---ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHI   77 (116)
Q Consensus        13 ~~~~~~~l~~~~~--~~---~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i   77 (116)
                      .| +++.+++...  ..   .|.++|..+++.+..+...      .. . .+.++||++.++.+.          .++.|
T Consensus        29 ~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g------~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v   99 (373)
T 2mad_H           29 GA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG------FL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYV   99 (373)
T ss_pred             CC-CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC------CC-C-CeEECCCCCEEEEEeccccccccCCCCCeE
Confidence            35 5666666553  33   7899999999888777654      22 3 999999999888875          36789


Q ss_pred             EEEECCCCeEEEEeecc-------cccEEEEEECCCCcEEEeee
Q psy17133         78 RFFDNVSGKLVHSMVAH-------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        78 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+||..+.+.+..+...       ......+.|+|||++|+.++
T Consensus       100 ~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n  143 (373)
T 2mad_H          100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ  143 (373)
T ss_pred             EEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEe
Confidence            99999988887766422       12356899999999998765

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=98.98  E-value=2.3e-07  Score=59.14  Aligned_cols=98  Identities=7%  Similarity=-0.036  Sum_probs=75.4

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECC--CCceeEEEecCCcCcCCCCceeEEEEc----CCCCEEEEEeC-CCeEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLE--TGKPVVRIDSSQFGVSGGGGINRVVCH----PTLPLTITAHD-DRHIR   78 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~-d~~i~   78 (116)
                      .+..+.|+| +++++++++.++.|.+||+.  +++.+.++...       .....++++    |+|+++++++. ++.+.
T Consensus       198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~  269 (567)
T 1qks_A          198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-------SEARSIETSKMEGWEDKYAIAGAYWPPQYV  269 (567)
T ss_dssp             CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-------SEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred             CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-------CCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence            456889999 88999888999999999995  77778777654       246789999    69998877655 69999


Q ss_pred             EEECCCCeEEEEeecc-----------cccEEEEEECCCCcEEE
Q psy17133         79 FFDNVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~  111 (116)
                      ++|..+.+.+..+...           ...+..+..++++..++
T Consensus       270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~v  313 (567)
T 1qks_A          270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI  313 (567)
T ss_dssp             EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred             EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEE
Confidence            9999999888776521           12566777777755443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.98  E-value=6.6e-08  Score=57.47  Aligned_cols=99  Identities=9%  Similarity=-0.045  Sum_probs=73.6

Q ss_pred             CceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133          6 TPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----------   74 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----------   74 (116)
                      .+..+.+ . ++..+++.. .++.|.++|..+++.+..+...       .....+.++|+++++++...+          
T Consensus       132 ~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~  202 (328)
T 3dsm_A          132 STEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEA  202 (328)
T ss_dssp             BCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCC
T ss_pred             CcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-------CCccceEEcCCCCEEEEECCCccCCccccCC
Confidence            4566777 3 445555544 4789999999999888777654       245778899999977776554          


Q ss_pred             CeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~  113 (116)
                      +.|.++|..+++....+... ......++|+|+++.|+.+
T Consensus       203 ~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~  242 (328)
T 3dsm_A          203 PSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI  242 (328)
T ss_dssp             CEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred             ceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence            78999999999887766532 2368899999999888764

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.95  E-value=3.1e-07  Score=54.52  Aligned_cols=100  Identities=18%  Similarity=0.210  Sum_probs=70.9

Q ss_pred             CceEEEEccCCCcEEE-EeeCCCeEEEEECC--CC-ce--eEEE---ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          6 TPTSIDFVRDESTKMV-TAFDNSACVLFDLE--TG-KP--VVRI---DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~-~~~~~~~v~i~~~~--~~-~~--~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      ....+.|+| +++.++ +...++.|.+|+..  ++ +.  ...+   ...      ...+..++++++|.++++...++.
T Consensus       180 ~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~------~~~p~gi~~d~~G~lwva~~~~~~  252 (326)
T 2ghs_A          180 IPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI------KGGMDGSVCDAEGHIWNARWGEGA  252 (326)
T ss_dssp             SEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS------SSEEEEEEECTTSCEEEEEETTTE
T ss_pred             ccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCC------CCCCCeeEECCCCCEEEEEeCCCE
Confidence            456789999 666554 44557899999975  55 31  1122   212      345678999999988777777789


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEEC-CCCcEEEee
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILSG  113 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~  113 (116)
                      |..|+. +++.+..+......+.+++|. ++++.|+.+
T Consensus       253 v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt  289 (326)
T 2ghs_A          253 VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT  289 (326)
T ss_dssp             EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             EEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence            999998 577777776566679999998 888766543

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.94  E-value=2.5e-08  Score=60.64  Aligned_cols=95  Identities=15%  Similarity=0.046  Sum_probs=72.6

Q ss_pred             EEccCCCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCC
Q psy17133         11 DFVRDESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDR   75 (116)
Q Consensus        11 ~~~~~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~   75 (116)
                      ...| +++.+++...     ++.|.++|..+++.+..+...      ... . +.++||++.++.++          .++
T Consensus        39 ~~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG------~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~  109 (386)
T 3sjl_D           39 APAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG------FLP-N-PVVADDGSFIAHASTVFSRIARGERTD  109 (386)
T ss_dssp             CCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC------SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred             ccCC-CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC------CCC-c-EEECCCCCEEEEEcccccccccCCCCC
Confidence            3467 6677766654     579999999999999988765      233 4 99999999887765          367


Q ss_pred             eEEEEECCCCeEEEEeeccc-------ccEEEEEECCCCcEEEeee
Q psy17133         76 HIRFFDNVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s  114 (116)
                      .|.+||..+.+.+..+....       .....+.|+|||++++.++
T Consensus       110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan  155 (386)
T 3sjl_D          110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ  155 (386)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred             EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEE
Confidence            89999999999888775221       2456789999999988764

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.94  E-value=3.7e-08  Score=63.92  Aligned_cols=102  Identities=8%  Similarity=0.001  Sum_probs=68.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCe----------------EEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSA----------------CVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPTLPLT   68 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~----------------v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~   68 (116)
                      +..+.|+| +++.|+.+..+..                |++|++.+++..  ..+.....    ...+..+.|+|||+++
T Consensus       173 ~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~----~~~~~~~~~SpDg~~l  247 (710)
T 2xdw_A          173 FSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE----PKWMGGAELSDDGRYV  247 (710)
T ss_dssp             SCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC----TTCEEEEEECTTSCEE
T ss_pred             cceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC----CeEEEEEEEcCCCCEE
Confidence            56799999 7788887765544                999999877632  22332210    3347789999999988


Q ss_pred             EEEeC-----CCeEEEEECCC------Ce-EEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         69 ITAHD-----DRHIRFFDNVS------GK-LVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        69 ~~~~~-----d~~i~~~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +..+.     +..|++||+.+      +. ....+..+...+.. .|+|+|+.|+..+
T Consensus       248 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s  304 (710)
T 2xdw_A          248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKT  304 (710)
T ss_dssp             EEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEE
T ss_pred             EEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEE
Confidence            77654     57899999976      43 24444444444443 4788888776544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=98.93  E-value=7.9e-08  Score=55.13  Aligned_cols=102  Identities=15%  Similarity=0.114  Sum_probs=71.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++.+.+ +++.+++...++.|.+|+..+..........      ...+..++++++++++++...++.|.+|+...
T Consensus       108 ~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~  180 (270)
T 1rwi_B          108 NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTG------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180 (270)
T ss_dssp             SSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCS------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             CCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeecccc------CCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence            4578899998 7777777667889999976544332211111      23578899999999777777788999999886


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .............+..++++++|..+++.
T Consensus       181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~  209 (270)
T 1rwi_B          181 NNQVVLPFTDITAPWGIAVDEAGTVYVTE  209 (270)
T ss_dssp             CCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred             CceEeecccCCCCceEEEECCCCCEEEEE
Confidence            65544332333568899999999776654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.91  E-value=2.7e-08  Score=64.52  Aligned_cols=99  Identities=11%  Similarity=0.101  Sum_probs=67.0

Q ss_pred             CceEEEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----
Q psy17133          6 TPTSIDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----   75 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----   75 (116)
                      .+..+.|+| ++++|+.+.     ....|+++|+.+++.+.... .      ......++|+ |++.++....+.     
T Consensus       130 ~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~------~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~  200 (693)
T 3iuj_A          130 ALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-K------DVKFSGISWL-GNEGFFYSSYDKPDGSE  200 (693)
T ss_dssp             EEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-E------EEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred             EEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-C------CceeccEEEe-CCCEEEEEEecCccccc
Confidence            467789999 778777532     23579999999988654311 1      1113567899 999888777663     


Q ss_pred             --------eEEEEECCCCeE--EEEee--c-ccccEEEEEECCCCcEEEee
Q psy17133         76 --------HIRFFDNVSGKL--VHSMV--A-HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        76 --------~i~~~~~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~l~~~  113 (116)
                              .|++|++.++..  ...+.  . +......+.|+|||++|+..
T Consensus       201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~  251 (693)
T 3iuj_A          201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLIS  251 (693)
T ss_dssp             ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEE
T ss_pred             ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEE
Confidence                    499999876542  22232  2 33456789999999988643

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=98.85  E-value=2.3e-07  Score=55.10  Aligned_cols=106  Identities=16%  Similarity=0.130  Sum_probs=71.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~   83 (116)
                      ..+..+++++ ++..+++...++.|.+||..+++....+..... .........+++ .+++++++.. .++.|.++|..
T Consensus        84 ~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~-~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~  160 (328)
T 3dsm_A           84 TSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDM-DMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE  160 (328)
T ss_dssp             SSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTC-CTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred             CCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCc-cccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence            4577889988 554444443789999999998887777764420 000113456666 3444444443 48899999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +++.+..+... .....++++|+|++++++.
T Consensus       161 t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~  190 (328)
T 3dsm_A          161 TDKVVDELTIG-IQPTSLVMDKYNKMWTITD  190 (328)
T ss_dssp             TTEEEEEEECS-SCBCCCEECTTSEEEEEBC
T ss_pred             CCeEEEEEEcC-CCccceEEcCCCCEEEEEC
Confidence            99988777642 3456789999999777653

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=98.84  E-value=1.6e-06  Score=50.73  Aligned_cols=97  Identities=12%  Similarity=0.070  Sum_probs=69.8

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ..+..|+|+++..+++...++.|+.||..+++. ..+..       ...+.+++++++++++++.  +..|.+||.++++
T Consensus        15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-------~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~   84 (297)
T 3g4e_A           15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-------DAPVSSVALRQSGGYVATI--GTKFCALNWKEQS   84 (297)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-------SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTE
T ss_pred             ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-------CCceEEEEECCCCCEEEEE--CCeEEEEECCCCc
Confidence            457889985556667767789999999987654 33332       2468899999999966554  5689999998887


Q ss_pred             EEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133         87 LVHSMVA----HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        87 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .......    ....+..++++|+|+++++.
T Consensus        85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~  115 (297)
T 3g4e_A           85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGT  115 (297)
T ss_dssp             EEEEEECCTTCSSEEEEEEEECTTSCEEEEE
T ss_pred             EEEEEecCCCCCCCCCCCEEECCCCCEEEec
Confidence            6443322    12357889999999977653

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.83  E-value=8.3e-08  Score=58.12  Aligned_cols=79  Identities=10%  Similarity=-0.130  Sum_probs=64.2

Q ss_pred             eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeEEEEECCCCeEEEEeecc---
Q psy17133         28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHIRFFDNVSGKLVHSMVAH---   94 (116)
Q Consensus        28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i~~~~~~~~~~~~~~~~~---   94 (116)
                      .+.++|..+++.+..+...      ..+  .+.++||++.++.+.          .++.|.+||..+++.+..+...   
T Consensus        47 ~vsvID~~t~~v~~~i~vG------~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~  118 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLGA------FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP  118 (368)
T ss_dssp             EEEEEETTTTEEEEEEEEC------TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred             eEEEEECCCCeEEEEEeCC------CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence            8899999999999998765      233  799999999888775          3688999999999999887632   


Q ss_pred             ----cccEEEEEECCCCcEEEeee
Q psy17133         95 ----LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        95 ----~~~v~~~~~~~~~~~l~~~s  114 (116)
                          ......++++|||++++.+.
T Consensus       119 ~~~~g~~P~~ia~SpDGk~lyVan  142 (368)
T 1mda_H          119 RFSVGPRVHIIGNCASSACLLFFL  142 (368)
T ss_dssp             SCCBSCCTTSEEECTTSSCEEEEE
T ss_pred             ccccCCCcceEEEcCCCCEEEEEc
Confidence                12356789999999988764

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.81  E-value=2.2e-07  Score=56.56  Aligned_cols=104  Identities=11%  Similarity=-0.061  Sum_probs=71.5

Q ss_pred             EEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecCCcC-cCCCCceeEEEEcCCCCEEEEEeC--CC
Q psy17133          9 SIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFG-VSGGGGINRVVCHPTLPLTITAHD--DR   75 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~--d~   75 (116)
                      .+.++| +++.+++++          .++.|.+||..+++.+..+...... .........+.++|||++++.+..  ++
T Consensus        82 ~va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~  160 (386)
T 3sjl_D           82 NPVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP  160 (386)
T ss_dssp             EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred             cEEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCC
Confidence            489999 777776654          3567999999999988887542100 000124667999999998888764  68


Q ss_pred             eEEEEECCCCeEEEEeeccc-ccE------EEEEECCCCcEEEee
Q psy17133         76 HIRFFDNVSGKLVHSMVAHL-DAV------TSLAVDPQGLYILSG  113 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~-~~v------~~~~~~~~~~~l~~~  113 (116)
                      .|.++|+.+++.+..+.... ..+      .-++.++||++++..
T Consensus       161 ~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~  205 (386)
T 3sjl_D          161 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVA  205 (386)
T ss_dssp             EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEE
T ss_pred             eEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEE
Confidence            99999999999988775211 000      113667888876654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.81  E-value=1.9e-06  Score=49.89  Aligned_cols=102  Identities=12%  Similarity=0.100  Sum_probs=72.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.++.+.+ +++.+++...++.|.+|+.. ++. ..+.....    ...+..+++++++.++++...++.|..|+..
T Consensus        14 ~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~   86 (299)
T 2z2n_A           14 DTGPYGITVSD-KGKVWITQHKANMISCINLD-GKI-TEYPLPTP----DAKVMCLTISSDGEVWFTENAANKIGRITKK   86 (299)
T ss_dssp             SCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCE-EEEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCe-EEecCCcc----cCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence            35688999998 77777766667899999987 543 33321111    3568899999999988887778899999976


Q ss_pred             CCeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133         84 SGKLVHS-MVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        84 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                       ++.... .......+..++++++++.+++.
T Consensus        87 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  116 (299)
T 2z2n_A           87 -GIIKEYTLPNPDSAPYGITEGPNGDIWFTE  116 (299)
T ss_dssp             -SCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred             -CcEEEEeCCCcCCCceeeEECCCCCEEEEe
Confidence             443221 22234568899999999877764

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.81  E-value=1.2e-07  Score=58.49  Aligned_cols=91  Identities=13%  Similarity=0.018  Sum_probs=69.8

Q ss_pred             CCcEEEEeeC-C----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CCCeEEEE
Q psy17133         16 ESTKMVTAFD-N----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DDRHIRFF   80 (116)
Q Consensus        16 ~~~~l~~~~~-~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d~~i~~~   80 (116)
                      +++.+++... .    +.|.++|..+++.+..+...      ...  .+.++||++.++.+.          .++.|.++
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG------~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi  154 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG------FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF  154 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC------SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC------CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence            5566665544 2    69999999999999998865      233  899999999887765          36789999


Q ss_pred             ECCCCeEEEEeecc-------cccEEEEEECCCCcEEEeee
Q psy17133         81 DNVSGKLVHSMVAH-------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        81 ~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |..+++.+..+...       ......+.|+|||++++.+.
T Consensus       155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n  195 (426)
T 3c75_H          155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQ  195 (426)
T ss_dssp             CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEE
T ss_pred             ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEe
Confidence            99999988876521       12345789999999998765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=98.75  E-value=2.5e-06  Score=50.68  Aligned_cols=97  Identities=11%  Similarity=0.002  Sum_probs=68.7

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ..+..|+|+++..+++...++.|..|+..+++. ..+...       ..+.++.++|+++++++.  +..|.+||..+++
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~-------~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~  120 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHALP-------FMGSALAKISDSKQLIAS--DDGLFLRDTATGV  120 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECS-------SCEEEEEEEETTEEEEEE--TTEEEEEETTTCC
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEECC-------CcceEEEEeCCCeEEEEE--CCCEEEEECCCCc
Confidence            367889995456667776788999999986653 333322       468899999999877765  3459999998887


Q ss_pred             EEEEeec----ccccEEEEEECCCCcEEEee
Q psy17133         87 LVHSMVA----HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        87 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .......    ....+..++++|+|+++++.
T Consensus       121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~  151 (326)
T 2ghs_A          121 LTLHAELESDLPGNRSNDGRMHPSGALWIGT  151 (326)
T ss_dssp             EEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred             EEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence            6443221    12357899999999977654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=98.74  E-value=3.6e-06  Score=48.71  Aligned_cols=101  Identities=7%  Similarity=0.015  Sum_probs=71.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++.+.+ ++..+++...++.+..|+.. ++ ...+.....    ...+..+.+++++.++++...++.|..|+. +
T Consensus        57 ~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~  128 (299)
T 2z2n_A           57 AKVMCLTISS-DGEVWFTENAANKIGRITKK-GI-IKEYTLPNP----DSAPYGITEGPNGDIWFTEMNGNRIGRITD-D  128 (299)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SC-EEEEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred             CceeeEEECC-CCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCc----CCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence            4678899988 67777776667889999976 43 233332111    346889999999998888777889999998 5


Q ss_pred             CeEEEEe-ecccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSM-VAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++..... ......+..++++++++.+++.
T Consensus       129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  158 (299)
T 2z2n_A          129 GKIREYELPNKGSYPSFITLGSDNALWFTE  158 (299)
T ss_dssp             CCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred             CCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence            6554332 2234568899999999877654

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.71  E-value=4.8e-07  Score=58.71  Aligned_cols=95  Identities=6%  Similarity=-0.069  Sum_probs=62.2

Q ss_pred             eEEEEccCCCcEEEEeeCCCe-------------EEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSA-------------CVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~-------------v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      ..+.|+| +++.|+.++.+..             |++|++.+++.  ...+.....    ...+..+.|+|||++++..+
T Consensus       171 ~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~----~~~~~~~~~SpDG~~l~~~~  245 (695)
T 2bkl_A          171 ATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD----PTTFLQSDLSRDGKYLFVYI  245 (695)
T ss_dssp             CCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC----TTCEEEEEECTTSCCEEEEE
T ss_pred             cceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC----CEEEEEEEECCCCCEEEEEE
Confidence            6789999 7788888776554             99999987763  233332211    34678999999999887766


Q ss_pred             CCC----eEEEEECCCCeEEEEeecccccEEEEEECCCCcE
Q psy17133         73 DDR----HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLY  109 (116)
Q Consensus        73 ~d~----~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  109 (116)
                      .++    .|++++..+++... +..+...+....+ +++++
T Consensus       246 ~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~~~~-~~g~l  284 (695)
T 2bkl_A          246 LRGWSENDVYWKRPGEKDFRL-LVKGVGAKYEVHA-WKDRF  284 (695)
T ss_dssp             EETTTEEEEEEECTTCSSCEE-EEECSSCCEEEEE-ETTEE
T ss_pred             eCCCCceEEEEEcCCCCceEE-eecCCCceEEEEe-cCCcE
Confidence            555    67777766555443 3333444455555 56663

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=98.70  E-value=1.9e-06  Score=50.32  Aligned_cols=105  Identities=15%  Similarity=0.143  Sum_probs=69.7

Q ss_pred             CCceEEEEccCCCcEEEE-------eeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCe
Q psy17133          5 GTPTSIDFVRDESTKMVT-------AFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRH   76 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~-------~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~   76 (116)
                      ..+.++.|++ ++..+++       ...++.|.+|+..+++... +.... ...+...+..+.++++ +.++++.. .+.
T Consensus        18 ~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~   93 (314)
T 1pjx_A           18 PGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG   93 (314)
T ss_dssp             TTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred             CCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence            3567899998 7777777       5678899999987776533 22200 0000246889999999 76555554 447


Q ss_pred             EEEEECCCCeEEEE-eec----ccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKLVHS-MVA----HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |.+|+.+ ++.... ...    ....+..++++++++++++..
T Consensus        94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~  135 (314)
T 1pjx_A           94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP  135 (314)
T ss_dssp             EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred             EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence            8999988 765443 221    123478999999998877653

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.68  E-value=6.8e-06  Score=50.44  Aligned_cols=102  Identities=12%  Similarity=0.070  Sum_probs=70.1

Q ss_pred             EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc---------CCCCceeEEEEcCCCCEEEEEe-CCCeEE
Q psy17133          9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV---------SGGGGINRVVCHPTLPLTITAH-DDRHIR   78 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~-~d~~i~   78 (116)
                      .++|+|+++.++++...++.|+.|+.. ++ +..+.+.....         ..-.....++++|++.++++-. .++.|+
T Consensus       271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~  348 (409)
T 3hrp_A          271 YLIYYFVDSNFYMSDQNLSSVYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLR  348 (409)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEE
T ss_pred             cEEEeCCCCEEEEEeCCCCEEEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEE
Confidence            899999556666666678899999976 33 33333321000         0013478999999999777777 889999


Q ss_pred             EEECCCCeEEEEeecc---------------cccEEEEEECCCCcEEEee
Q psy17133         79 FFDNVSGKLVHSMVAH---------------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~  113 (116)
                      .|+..+++... +.++               -.....+++++++.++++-
T Consensus       349 ~~~~~~G~v~~-~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad  397 (409)
T 3hrp_A          349 KLDILDGYVST-VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE  397 (409)
T ss_dssp             EEETTTTEEEE-EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred             EEECCCCEEEE-EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence            99987787543 3322               1358899999998777654

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=98.64  E-value=2.3e-06  Score=52.50  Aligned_cols=98  Identities=11%  Similarity=0.053  Sum_probs=68.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC--eEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR--HIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~--~i~~~~~   82 (116)
                      ..+..++|++ +++++++...++.|++||..+++........       .... ++++|++..++.+..++  .|..++.
T Consensus       131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-------~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~  201 (409)
T 3hrp_A          131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-------KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK  201 (409)
T ss_dssp             CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETC-------CBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred             CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccC-------CCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence            4678899998 7777777777899999999876654444332       2234 89999999888887755  8999998


Q ss_pred             CCCeEEEEe----ecccccEEEEEECC-CCcEEE
Q psy17133         83 VSGKLVHSM----VAHLDAVTSLAVDP-QGLYIL  111 (116)
Q Consensus        83 ~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~  111 (116)
                      ..+.....+    ......+..++++| ++.+++
T Consensus       202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv  235 (409)
T 3hrp_A          202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF  235 (409)
T ss_dssp             GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE
T ss_pred             CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE
Confidence            765543333    21345677889999 444443

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.63  E-value=1.2e-06  Score=57.34  Aligned_cols=101  Identities=9%  Similarity=0.067  Sum_probs=64.0

Q ss_pred             eEEEEccCCCcEEEEeeCCC--------------eEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133          8 TSIDFVRDESTKMVTAFDNS--------------ACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~--------------~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      ..+.|+| + +.|+.+..+.              .|++|++.+++.  ...+.....    ...+..+.|+|||++++..
T Consensus       212 ~~~~wsp-D-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----~~~~~~~~~SpDG~~l~~~  285 (741)
T 1yr2_A          212 SGLAWLG-N-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL----PKRGHGASVSSDGRWVVIT  285 (741)
T ss_dssp             CCCEEST-T-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC----TTCEEEEEECTTSCEEEEE
T ss_pred             ccEEEEC-C-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC----CeEEEEEEECCCCCEEEEE
Confidence            5688999 6 7776665433              488999877653  223332210    2347899999999988776


Q ss_pred             eCC-----CeEEEEECCCC--eEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         72 HDD-----RHIRFFDNVSG--KLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        72 ~~d-----~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+     ..|++||+.++  +....+..+........ +|+++.|+..+.
T Consensus       286 ~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~  335 (741)
T 1yr2_A          286 SSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSG  335 (741)
T ss_dssp             EECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEEC
T ss_pred             EEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEEC
Confidence            644     48999999876  31334443433344443 488887776543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.61  E-value=6e-06  Score=48.47  Aligned_cols=97  Identities=13%  Similarity=0.052  Sum_probs=68.7

Q ss_pred             CceEEEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          6 TPTSIDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ......|+| +++ ++++...++.+..|+. +++ ...+...      ...+..+.++++|+++++...++.|..|+.. 
T Consensus        46 ~~egp~~~~-~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~------~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-  115 (305)
T 3dr2_A           46 WSEGPAWWE-AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDA------TAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-  115 (305)
T ss_dssp             SEEEEEEEG-GGTEEEEEETTTTEEEEEET-TSC-EEEEEES------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred             CccCCeEeC-CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCC------CCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence            346788999 566 5666667899999998 454 3444433      3568899999999977777677899999986 


Q ss_pred             CeEEEEeecc----cccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVAH----LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~~----~~~v~~~~~~~~~~~l~~  112 (116)
                      ++........    ...+..++++|+|+++++
T Consensus       116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t  147 (305)
T 3dr2_A          116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT  147 (305)
T ss_dssp             SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred             CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence            6543322211    124567999999998885

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.59  E-value=6.7e-06  Score=49.89  Aligned_cols=75  Identities=8%  Similarity=0.089  Sum_probs=59.3

Q ss_pred             EEEEccCCCcEEEEeeC----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCe
Q psy17133          9 SIDFVRDESTKMVTAFD----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRH   76 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~   76 (116)
                      .+.++| +++.+.+...          .+.|.++|..+++.+..+...       .....+.|+||++ .++++. .++.
T Consensus       271 ~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-------~~p~~i~~s~Dg~~~l~v~~~~~~~  342 (373)
T 2mad_H          271 QVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-------HDVDAISVAQDGGPDLYALSAGTEV  342 (373)
T ss_pred             eEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-------CCcCeEEECCCCCeEEEEEcCCCCe
Confidence            367888 5566655432          357999999999988888654       3578999999998 777777 5899


Q ss_pred             EEEEECCCCeEEEEe
Q psy17133         77 IRFFDNVSGKLVHSM   91 (116)
Q Consensus        77 i~~~~~~~~~~~~~~   91 (116)
                      |.++|..+++.+..+
T Consensus       343 V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          343 LHIYDAGAGDQDQST  357 (373)
T ss_pred             EEEEECCCCCEEeee
Confidence            999999999988774

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.59  E-value=5.1e-06  Score=48.28  Aligned_cols=102  Identities=13%  Similarity=0.030  Sum_probs=70.7

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH   89 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~   89 (116)
                      +.+++ +++.++++..++.++++|..+.+.+..+....... .-..++.+.+. ++++.+....++.|.+.|..+++.+.
T Consensus       110 ~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~-p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~  186 (266)
T 2iwa_A          110 WGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH-RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLG  186 (266)
T ss_dssp             CEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEE
T ss_pred             EEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc-ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEE
Confidence            34556 45666666668899999999988888776431100 01235677777 67655555568899999999999988


Q ss_pred             Eeeccc-------------ccEEEEEECCCCcEEEeee
Q psy17133         90 SMVAHL-------------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        90 ~~~~~~-------------~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+....             .....++|+|+++.++.++
T Consensus       187 ~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg  224 (266)
T 2iwa_A          187 WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG  224 (266)
T ss_dssp             EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred             EEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence            876321             2468999999988766554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=98.58  E-value=5.4e-06  Score=48.68  Aligned_cols=104  Identities=12%  Similarity=0.055  Sum_probs=67.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE----EeC------
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT----AHD------   73 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~------   73 (116)
                      ...+..+.+++ +++++++...++.|.+|+.. ++.. .+...... .....+..+.++|+|.++++    +..      
T Consensus        85 ~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~~-~~~~~~~~-~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~  160 (305)
T 3dr2_A           85 TAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQAH-LLVGRYAG-KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC  160 (305)
T ss_dssp             CSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-EEECEETT-EECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred             CCccceeeECC-CCCEEEEECCCCEEEEECCC-CCEE-EEEeccCC-CccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence            34577899999 77766665566889999986 5532 22211000 00134678999999998886    321      


Q ss_pred             -------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         74 -------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 -------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                             .+.|..++..+++.....  .......++|+|+++.|+.+
T Consensus       161 ~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~  205 (305)
T 3dr2_A          161 PADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVS  205 (305)
T ss_dssp             CCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEE
T ss_pred             ccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEE
Confidence                   256777887667654433  33456789999999977654

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.58  E-value=1.3e-05  Score=46.32  Aligned_cols=102  Identities=9%  Similarity=0.076  Sum_probs=72.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+.++.+.+ +++.+++...++.|.+|+.. ++.. .+.....    ...+..+++.+++.++++...++.|..+|..
T Consensus        19 ~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~   91 (300)
T 2qc5_A           19 DSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIK-EFEVPTP----DAKVMCLIVSSLGDIWFTENGANKIGKLSKK   91 (300)
T ss_dssp             TCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE-EEECSST----TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceE-EEECCCC----CCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence            35678899998 67777776678899999987 5433 2322111    3468899999999988877778899999987


Q ss_pred             CCeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133         84 SGKLVHS-MVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        84 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                       ++.... .......+..++++++++++++.
T Consensus        92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  121 (300)
T 2qc5_A           92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQ  121 (300)
T ss_dssp             -SCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred             -CCeEEecCCCCCCCCccceECCCCCEEEEc
Confidence             655322 22233568899999999877664

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.56  E-value=1.9e-06  Score=51.46  Aligned_cols=101  Identities=7%  Similarity=-0.029  Sum_probs=67.3

Q ss_pred             ceEEEEccCCCcEEEEeeCC-CeEEEEECC---CCc-----ee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDN-SACVLFDLE---TGK-----PV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~-~~v~i~~~~---~~~-----~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      +..++|+| +++.|+++... ..++.++..   .+.     ..  ....++      .+....++++++|.++++...++
T Consensus       197 ~~gia~s~-dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~------~g~pdgia~d~~G~l~va~~~~~  269 (343)
T 2qe8_A          197 VNGIVLDA-ENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE------KPICDGISIDKDHNIYVGDLAHS  269 (343)
T ss_dssp             EEEEEECT-TSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE------CCSCSCEEECTTCCEEEEEGGGT
T ss_pred             cceeEecc-CCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc------CCCCceEEECCCCCEEEEccCCC
Confidence            57899999 67777766544 356555532   111     00  011122      23467899999999999988899


Q ss_pred             eEEEEECCCCeEEEEeec-ccccEEEEEECCCCcEEEeee
Q psy17133         76 HIRFFDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .|.+|+.++++....... ....+..++|.++++++++.+
T Consensus       270 ~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~  309 (343)
T 2qe8_A          270 AIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN  309 (343)
T ss_dssp             EEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred             eEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence            999999856765443332 234688999999998877754

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.54  E-value=1.1e-05  Score=46.76  Aligned_cols=98  Identities=14%  Similarity=0.141  Sum_probs=66.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-   94 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-   94 (116)
                      +++.|+.+.....++++|..+.+.+..++...... .-..++.+.+. +|++.+..-.++.|.+.|.++++.+..+... 
T Consensus       135 dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~-~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~  212 (262)
T 3nol_A          135 NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE-ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNG  212 (262)
T ss_dssp             CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE-ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTT
T ss_pred             CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc-cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCc
Confidence            44556555557788888888888777766531100 01234556665 6766665656889999999999998887531 


Q ss_pred             -----------cccEEEEEECCCCcEEEeeec
Q psy17133         95 -----------LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        95 -----------~~~v~~~~~~~~~~~l~~~s~  115 (116)
                                 ..-...++|+|+++.|+.++.
T Consensus       213 L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          213 ILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             GGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             CccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence                       124589999998887766554

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=98.53  E-value=1.9e-05  Score=45.69  Aligned_cols=101  Identities=7%  Similarity=-0.050  Sum_probs=71.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++.+.+ +++.+++...++.|..+|.. ++. ..+.....    ...+..+++.+++.++++...++.|..++.. 
T Consensus        62 ~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-  133 (300)
T 2qc5_A           62 AKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGF-TEYPLPQP----DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-  133 (300)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEECSST----TCCEEEEEECSTTCEEEEETTTTEEEEECTT-
T ss_pred             CcceeEEECC-CCCEEEEecCCCeEEEECCC-CCe-EEecCCCC----CCCCccceECCCCCEEEEccCCCeEEEECCC-
Confidence            4678888888 67777766667889999987 554 33332111    3468899999999988887778899999987 


Q ss_pred             CeEEEE-eecccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHS-MVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++.... +......+..++++++++.+++.
T Consensus       134 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~  163 (300)
T 2qc5_A          134 GTIYEYDLPNKGSYPAFITLGSDNALWFTE  163 (300)
T ss_dssp             SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred             CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence            655432 22234568899999999866554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.51  E-value=4.9e-06  Score=50.51  Aligned_cols=87  Identities=9%  Similarity=0.080  Sum_probs=64.9

Q ss_pred             EEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCeEE
Q psy17133         10 IDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRHIR   78 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~i~   78 (116)
                      +.++| +++.++++..         ...+.++|..+++.+..+...       .....+.++|+++ .+++.. .++.|.
T Consensus       269 v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-------~~p~gi~~s~Dg~~l~va~~~~~~~Vs  340 (368)
T 1mda_H          269 VAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-------HDSDAIIAAQDGASDNYANSAGTEVLD  340 (368)
T ss_dssp             EEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-------EEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred             eEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-------CCcceEEECCCCCEEEEEccCCCCeEE
Confidence            67899 6666665432         235679999999988888755       3588999999987 566666 599999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECC
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      ++|+.+++.+..+.... ....+++.+
T Consensus       341 VID~~t~kvv~~I~vg~-~P~~i~~~~  366 (368)
T 1mda_H          341 IYDAASDQDQSSVELDK-GPESLSVQN  366 (368)
T ss_dssp             EEESSSCEEEEECCCCS-CCCEEECCC
T ss_pred             EEECCCCcEEEEEECCC-CCCEEEeec
Confidence            99999999998887433 345566554

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.49  E-value=1.7e-05  Score=49.37  Aligned_cols=103  Identities=14%  Similarity=0.132  Sum_probs=73.2

Q ss_pred             eEEEEccCCCcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---------
Q psy17133          8 TSIDFVRDESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---------   72 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------   72 (116)
                      -.+...| ++ .++++..+      +.+.++|..+.+.+.+++.....   ...-..+.|+|+++.+++..         
T Consensus       141 h~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~---~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~  215 (462)
T 2ece_A          141 HTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD---QYLAYDFWWNLPNEVLVSSEWAVPNTIED  215 (462)
T ss_dssp             EEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT---CCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred             cceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC---ccccceEEECCCCCEEEEccCcCcccccc
Confidence            3456778 66 66655444      78999999999999888743110   12234588899999888875         


Q ss_pred             ----------CCCeEEEEECCCCeEEEEeecc--cccEEEEEE--CCCCcEEEeeec
Q psy17133         73 ----------DDRHIRFFDNVSGKLVHSMVAH--LDAVTSLAV--DPQGLYILSGTY  115 (116)
Q Consensus        73 ----------~d~~i~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~s~  115 (116)
                                ....|.+||+.+++.+..+...  ......+.|  +|++++++.++.
T Consensus       216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e  272 (462)
T 2ece_A          216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMV  272 (462)
T ss_dssp             CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEE
T ss_pred             ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEe
Confidence                      3689999999999888877642  134455555  999998877653

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.46  E-value=5.9e-06  Score=51.06  Aligned_cols=74  Identities=18%  Similarity=0.349  Sum_probs=60.3

Q ss_pred             EEEccCCCcEEEEeeC----------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEe-CCCeE
Q psy17133         10 IDFVRDESTKMVTAFD----------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAH-DDRHI   77 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~----------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-~d~~i   77 (116)
                      +.++| +++.+++...          .+.|.+.|..+.+.+..+...       .....+.++|+++ .+++.. .++.|
T Consensus       324 va~s~-dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-------~~P~gia~spDg~~~lyv~n~~s~~V  395 (426)
T 3c75_H          324 TAYHR-QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-------HEIDSINVSQDAEPLLYALSAGTQTL  395 (426)
T ss_dssp             EEEEG-GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------EEECEEEECCSSSCEEEEEETTTTEE
T ss_pred             eEEcC-CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-------CCcCeEEEccCCCEEEEEEcCCCCeE
Confidence            68888 5565555432          347999999999999998755       3588999999998 888887 58999


Q ss_pred             EEEECCCCeEEEEe
Q psy17133         78 RFFDNVSGKLVHSM   91 (116)
Q Consensus        78 ~~~~~~~~~~~~~~   91 (116)
                      .++|..+++.+..+
T Consensus       396 sVID~~t~kvv~tI  409 (426)
T 3c75_H          396 HIYDAATGEELRSV  409 (426)
T ss_dssp             EEEETTTCCEEEEE
T ss_pred             EEEECCCCCEEEEe
Confidence            99999999999887

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.44  E-value=2.6e-06  Score=55.98  Aligned_cols=100  Identities=8%  Similarity=-0.027  Sum_probs=63.6

Q ss_pred             CceEEEEc-cCCCcEEEEeeC-C----CeEEEEECCCC-ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----
Q psy17133          6 TPTSIDFV-RDESTKMVTAFD-N----SACVLFDLETG-KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----   74 (116)
Q Consensus         6 ~v~~~~~~-~~~~~~l~~~~~-~----~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----   74 (116)
                      .+....|+ | ++++|+.... +    ..|+++|+.++ +.+..   ..     ......+.|+||++.|+....+    
T Consensus       175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~---~~-----~~~~~~~~WspDg~~l~y~~~d~~~~  245 (751)
T 2xe4_A          175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD---KV-----SGTNGEIVWGPDHTSLFYVTKDETLR  245 (751)
T ss_dssp             EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC---CE-----EEECSCCEECSSTTEEEEEEECTTCC
T ss_pred             EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc---cc-----cCceeeEEEecCCCEEEEEEECCCCC
Confidence            35678999 9 7787765432 2    35999999987 53211   10     1123568899999877665544    


Q ss_pred             -CeEEEEECCCCeE--EEEee-cccccEEEEEECCCCcEEEeee
Q psy17133         75 -RHIRFFDNVSGKL--VHSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 -~~i~~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                       ..|..+++.++..  ...+. ........+.|+|||++|+..+
T Consensus       246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~  289 (751)
T 2xe4_A          246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS  289 (751)
T ss_dssp             EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred             CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence             3688888876532  22222 2223456789999999987654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.41  E-value=1e-06  Score=56.26  Aligned_cols=102  Identities=8%  Similarity=0.049  Sum_probs=69.8

Q ss_pred             CceEEEEccCCCcEEEEee-CCCeEEEEECCCCc------------eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          6 TPTSIDFVRDESTKMVTAF-DNSACVLFDLETGK------------PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      .+-++.++| +++++++++ .+..+.++|+.+.+            .+..++..       .....++|+|+|....+.-
T Consensus       278 ~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-------~gP~h~aF~~dG~aY~t~~  349 (595)
T 1fwx_A          278 NPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-------LGPLHTAFDGRGNAYTSLF  349 (595)
T ss_dssp             SCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-------SCEEEEEECTTSEEEEEET
T ss_pred             CceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-------CCcceEEECCCCeEEEEEe
Confidence            456789999 677666554 68899999998543            22333222       4578999999994334455


Q ss_pred             CCCeEEEEECCC----------CeEEEEeecccccE-----EEEEECCCCcEEEeeec
Q psy17133         73 DDRHIRFFDNVS----------GKLVHSMVAHLDAV-----TSLAVDPQGLYILSGTY  115 (116)
Q Consensus        73 ~d~~i~~~~~~~----------~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~s~  115 (116)
                      .++.|..|++++          .+.+..+..+..+.     ..+..+|||++|+++..
T Consensus       350 ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          350 LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            699999999976          45666666554422     12245899999988653

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.41  E-value=4.2e-05  Score=43.88  Aligned_cols=100  Identities=16%  Similarity=0.118  Sum_probs=66.8

Q ss_pred             EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      +.+ ++..|+.+..+.+|+++|..+.+.+..++....... -..++.+.+. +|++.+..-.+..|.+.|.++++.+..+
T Consensus       110 lt~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~-~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~i  186 (243)
T 3mbr_X          110 LTS-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRP-LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWI  186 (243)
T ss_dssp             EEE-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred             Eee-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcc-cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence            344 445555555688899999998888877765321000 1234566655 6665555556889999999999998887


Q ss_pred             ecc-------------cccEEEEEECCCCcEEEeee
Q psy17133         92 VAH-------------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        92 ~~~-------------~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ...             ..-...++++|+++.|+.++
T Consensus       187 dl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          187 DLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             ECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             ECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            521             12568999999877666554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.37  E-value=2.9e-05  Score=45.15  Aligned_cols=96  Identities=8%  Similarity=-0.040  Sum_probs=61.9

Q ss_pred             ceEEEEccCCCcEEEEeeC--CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFD--NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~--~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~   83 (116)
                      ...+.|++ ++..+++.+.  ++.|+++|..+++.+..+....     ......+.+.  +..++. .-.++.+.++|..
T Consensus        23 ~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-----~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~   94 (266)
T 2iwa_A           23 TQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-----SYFGEGLTLL--NEKLYQVVWLKNIGFIYDRR   94 (266)
T ss_dssp             EEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-----TCCEEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred             cccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-----CcceEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence            46899998 5554444443  6799999999999888876431     1122344444  445544 4457899999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.+.+..+......-..  +++|++.++.
T Consensus        95 t~~v~~~i~~g~~~g~g--lt~Dg~~l~v  121 (266)
T 2iwa_A           95 TLSNIKNFTHQMKDGWG--LATDGKILYG  121 (266)
T ss_dssp             TTEEEEEEECCSSSCCE--EEECSSSEEE
T ss_pred             CCcEEEEEECCCCCeEE--EEECCCEEEE
Confidence            99998887532122233  4456665554

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.36  E-value=3.8e-05  Score=44.61  Aligned_cols=97  Identities=15%  Similarity=0.119  Sum_probs=65.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAH-   94 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~-   94 (116)
                      +++.|+.+..+..++++|..+.+.+..++....... -..++.+.+. +|++.+..-.++.|.+.|.++++.+..+... 
T Consensus       144 Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~-v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~  221 (268)
T 3nok_A          144 WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP-VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASA  221 (268)
T ss_dssp             ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred             CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc-cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence            345666655678899999888888777765321000 1234566666 6766655556889999999999998887522 


Q ss_pred             ------------cccEEEEEECCCCcEEEeee
Q psy17133         95 ------------LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        95 ------------~~~v~~~~~~~~~~~l~~~s  114 (116)
                                  ..-...++++|+++.|+.++
T Consensus       222 L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG  253 (268)
T 3nok_A          222 LTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG  253 (268)
T ss_dssp             HHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred             CcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence                        12568999999766555444

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.36  E-value=5.5e-05  Score=47.14  Aligned_cols=104  Identities=12%  Similarity=0.081  Sum_probs=69.6

Q ss_pred             ceEEEEccCCCcEEEEee-------------------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE--cCCC
Q psy17133          7 PTSIDFVRDESTKMVTAF-------------------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC--HPTL   65 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~-------------------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~   65 (116)
                      .+.+-|+| +++.++++.                   ...+|.+||+.+++.+.++.....    ......+.|  +|++
T Consensus       190 ~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~----g~~P~~i~f~~~Pdg  264 (462)
T 2ece_A          190 AYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE----NRMALELRPLHDPTK  264 (462)
T ss_dssp             CCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT----EEEEEEEEECSSTTC
T ss_pred             cceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC----CCccceeEeeECCCC
Confidence            34577899 778777774                   368999999998887777765311    123455655  9999


Q ss_pred             CEEEEEe------CCCeEEEEECCCCeEE--EEe--ecc----------------cccEEEEEECCCCcEEEeeec
Q psy17133         66 PLTITAH------DDRHIRFFDNVSGKLV--HSM--VAH----------------LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        66 ~~~~~~~------~d~~i~~~~~~~~~~~--~~~--~~~----------------~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      ++++.++      .+++|.+|....++..  +.+  ...                ......+.+++|+++|..+.+
T Consensus       265 ~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr  340 (462)
T 2ece_A          265 LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW  340 (462)
T ss_dssp             CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred             CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence            9887766      4568877766544321  111  110                134678999999999987654

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.34  E-value=8.2e-06  Score=53.24  Aligned_cols=78  Identities=9%  Similarity=0.051  Sum_probs=56.8

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  105 (116)
                      +.++.||+.+++.+-.++.+.       ....-.+...+.+++.++.|+.++.||.++|+.+..+..... ...-+.|..
T Consensus       455 g~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~  527 (689)
T 1yiq_A          455 GKLIAWDPVKQQAAWEVPYVT-------IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV  527 (689)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             eeEEEEECCCCCeEeEccCCC-------CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence            679999999999888776552       222234455677889999999999999999999988764322 223466778


Q ss_pred             CCcEEE
Q psy17133        106 QGLYIL  111 (116)
Q Consensus       106 ~~~~l~  111 (116)
                      +|+..+
T Consensus       528 ~G~qyv  533 (689)
T 1yiq_A          528 DGEQYV  533 (689)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            887554

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.27  E-value=0.0001  Score=42.61  Aligned_cols=104  Identities=13%  Similarity=0.060  Sum_probs=72.5

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+..++|+|+++.++++...++.|...|.. ++.+..+.-..     ......+++.+++.++++.-.++.+.++++..
T Consensus        27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-----~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~  100 (255)
T 3qqz_A           27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-----VKDLETIEYIGDNQFVISDERDYAIYVISLTP  100 (255)
T ss_dssp             SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-----CSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred             cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-----CCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence            4688999999544455557778899999997 88777775331     24678899998888777766678899998754


Q ss_pred             Ce---EEEEee------cccccEEEEEECCCCcEEEeee
Q psy17133         85 GK---LVHSMV------AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 ~~---~~~~~~------~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..   .+....      ........++|+|.++.|.++.
T Consensus       101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~  139 (255)
T 3qqz_A          101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK  139 (255)
T ss_dssp             TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE
T ss_pred             CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE
Confidence            33   122221      1233468999999987776654

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.25  E-value=0.00011  Score=42.23  Aligned_cols=99  Identities=12%  Similarity=0.010  Sum_probs=62.4

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~   85 (116)
                      +..++|+++++..+++...++.|..++.........+...      ......+++++++..+ ++-...+.|.++++...
T Consensus        38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~  111 (267)
T 1npe_A           38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT  111 (267)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence            4678888844445555556789999998755433333222      2467899999976544 45555789999998743


Q ss_pred             eEEEEeecccccEEEEEECCCCcEEE
Q psy17133         86 KLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        86 ~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      ...............++++|++..|+
T Consensus       112 ~~~~~~~~~~~~P~~i~vd~~~g~ly  137 (267)
T 1npe_A          112 QRRVLFDTGLVNPRGIVTDPVRGNLY  137 (267)
T ss_dssp             SCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred             CEEEEEECCCCCccEEEEeeCCCEEE
Confidence            32222222224678899999655544

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.23  E-value=2.1e-05  Score=51.26  Aligned_cols=78  Identities=8%  Similarity=0.038  Sum_probs=56.4

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc-ccEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHL-DAVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~  105 (116)
                      +.|..||..+++.+-.++..       .......+..++..++.++.++.+++||.++++.+..+.... ....-+.|..
T Consensus       457 g~l~A~D~~tG~~~W~~~~~-------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~  529 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHV-------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV  529 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEES-------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             cEEEEEeCCCCcEEeecCCC-------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEe
Confidence            67999999999988777644       123334455677788888999999999999999998886332 2223455667


Q ss_pred             CCcEEE
Q psy17133        106 QGLYIL  111 (116)
Q Consensus       106 ~~~~l~  111 (116)
                      +|+.++
T Consensus       530 ~G~~~v  535 (677)
T 1kb0_A          530 DGRQYV  535 (677)
T ss_dssp             TTEEEE
T ss_pred             CCEEEE
Confidence            877554

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.14  E-value=0.00016  Score=41.95  Aligned_cols=77  Identities=10%  Similarity=-0.050  Sum_probs=55.1

Q ss_pred             eEEEEccCCCcEEEEeeCCC--eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECCC
Q psy17133          8 TSIDFVRDESTKMVTAFDNS--ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNVS   84 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~~   84 (116)
                      ..+.|+  ++.++.+.+.++  .|+++|+.+++.+..+...       .......+.+++..++... .++.+.++|.++
T Consensus        46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t  116 (262)
T 3nol_A           46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN  116 (262)
T ss_dssp             EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred             ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-------CccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence            677887  346666666655  8999999999988888654       2344444444555555544 488999999999


Q ss_pred             CeEEEEeec
Q psy17133         85 GKLVHSMVA   93 (116)
Q Consensus        85 ~~~~~~~~~   93 (116)
                      .+.+..+..
T Consensus       117 ~~~~~ti~~  125 (262)
T 3nol_A          117 LRQVRSFNY  125 (262)
T ss_dssp             CCEEEEEEC
T ss_pred             CcEEEEEEC
Confidence            999988873

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.08  E-value=0.0003  Score=40.44  Aligned_cols=102  Identities=11%  Similarity=-0.036  Sum_probs=63.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i~~~~   81 (116)
                      ..+..++++++++..+++....+.|.+++..... ...+....     ......++++|++..++.+..   .+.|..++
T Consensus        79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~-----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~  152 (267)
T 1npe_A           79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTG-----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH  152 (267)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred             CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECC-----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence            4567889988444555555567889999986433 23332211     235789999997655544443   46888888


Q ss_pred             CCCCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMV-AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +.. .....+. ........++++|++..|+.+
T Consensus       153 ~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~  184 (267)
T 1npe_A          153 MDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWV  184 (267)
T ss_dssp             TTS-CCCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred             cCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence            763 3323222 223457889999987766544

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.04  E-value=0.00022  Score=46.57  Aligned_cols=99  Identities=8%  Similarity=0.098  Sum_probs=60.8

Q ss_pred             CceEEEEccCCCcEEEEee----CCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeC---CCe
Q psy17133          6 TPTSIDFVRDESTKMVTAF----DNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHD---DRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~---d~~   76 (116)
                      ....+.|+| ++++|+...    ....++++|+.++. ....+..+      ....... +++++..++. ...   .+.
T Consensus       235 ~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~------~~~~~~~-~~~~g~~l~~~t~~~~~~~~  306 (693)
T 3iuj_A          235 RYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD------LDADVSL-VDNKGSTLYLLTNRDAPNRR  306 (693)
T ss_dssp             SEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS------SSSCEEE-EEEETTEEEEEECTTCTTCE
T ss_pred             EEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC------CCceEEE-EeccCCEEEEEECCCCCCCE
Confidence            356788999 677665433    23589999997653 34555544      2233333 5666665544 433   367


Q ss_pred             EEEEECCCCeE--EEEeecccccEEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKL--VHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |..+++.++..  .+.+..+...+.  .|+++++.|+...
T Consensus       307 l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~  344 (693)
T 3iuj_A          307 LVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY  344 (693)
T ss_dssp             EEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE
T ss_pred             EEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE
Confidence            99999987653  234444544444  7888888876543

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.01  E-value=0.00032  Score=40.80  Aligned_cols=92  Identities=10%  Similarity=-0.020  Sum_probs=61.1

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ..+.|+.  +.++.+.+.++.|+++|+++++.+..+ ..       .......+.+++. +....-.++.+.++|.++.+
T Consensus        58 qGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-------~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~  127 (268)
T 3nok_A           58 QGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-RL-------GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ  127 (268)
T ss_dssp             EEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-EC-------TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred             ceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-------CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence            5777764  466677778889999999999988877 33       2334433344444 44444458899999999999


Q ss_pred             EEEEeecccccEEEEEECCCCcEEEe
Q psy17133         87 LVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        87 ~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+.++... ..-..++  ++++.|+.
T Consensus       128 ~~~ti~~~-~eGwGLt--~Dg~~L~v  150 (268)
T 3nok_A          128 RERTTRYS-GEGWGLC--YWNGKLVR  150 (268)
T ss_dssp             EEEEEECS-SCCCCEE--EETTEEEE
T ss_pred             EEEEEeCC-CceeEEe--cCCCEEEE
Confidence            99888742 2223444  45555543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.98  E-value=0.00079  Score=41.73  Aligned_cols=100  Identities=15%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCceEEEEccCCCcEEEEeeC-CC----eEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCe
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD-NS----ACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRH   76 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~-~~----~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~   76 (116)
                      ..+..++|++ +++.|+++.. ++    .+..++.. +...  ..+..       ......++++| ++.++++-..++.
T Consensus       179 ~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~~~~l~~-------~~~p~giavdp~~g~lyv~d~~~~~  249 (430)
T 3tc9_A          179 SKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRE-SGFKVITELTK-------GQNCNGAETHPINGELYFNSWNAGQ  249 (430)
T ss_dssp             SCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGG-GTSCSEEEEEE-------CSSCCCEEECTTTCCEEEEETTTTE
T ss_pred             CCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCC-Cceeeeeeecc-------CCCceEEEEeCCCCEEEEEECCCCE
Confidence            4577899998 6775555442 21    34444433 3221  22221       13467888999 6777777767889


Q ss_pred             EEEEECCCCeEEEEeec-ccccEEEEEECCCCcEEEee
Q psy17133         77 IRFFDNVSGKLVHSMVA-HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~  113 (116)
                      |..++...+........ .......++|+|++++|+.+
T Consensus       250 V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~  287 (430)
T 3tc9_A          250 VFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIV  287 (430)
T ss_dssp             EEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred             EEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEE
Confidence            99999987665333221 22357889999999965543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=97.90  E-value=0.00056  Score=44.10  Aligned_cols=95  Identities=11%  Similarity=0.081  Sum_probs=69.8

Q ss_pred             CCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-c-CCCCEEEEEe------------------CC
Q psy17133         16 ESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-H-PTLPLTITAH------------------DD   74 (116)
Q Consensus        16 ~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~------------------~d   74 (116)
                      +++++..+. .+..|.+.|+.+.+....+....     ...+..+++ . |++.++++++                  .+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-----g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~  174 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-----AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV  174 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-----CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-----CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence            345665554 57789999999998777554321     135778887 5 8999888774                  24


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.+.+.|.++.+...++.... ....++++|+|+++++++.+
T Consensus       175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~  215 (595)
T 1fwx_A          175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYN  215 (595)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESC
T ss_pred             ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecC
Confidence            579999999999888876322 45678899999999988753

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.87  E-value=5.9e-05  Score=45.66  Aligned_cols=90  Identities=10%  Similarity=0.051  Sum_probs=53.4

Q ss_pred             EEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC---CEEEEEeCCCeEEEEECCCCeE
Q psy17133         11 DFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL---PLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus        11 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      .++| ++..+++++.++.++.||..+++.+..+....        .....+..+.   ..++.++.++.+..||..+|+.
T Consensus       125 ~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~  195 (369)
T 2hz6_A          125 SLSP-STSLLYLGRTEYTITMYDTKTRELRWNATYFD--------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV  195 (369)
T ss_dssp             ---------EEEEEEEEEEECCCSSSSSCCCEEEEEE--------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred             cccc-cCCEEEEEecCCEEEEEECCCCCEEEeEeccc--------ccCccccCCccccceEEEECCCCEEEEEECCCCcE
Confidence            3455 55677777878889999988887665554321        1112223321   4566788899999999999998


Q ss_pred             EEEeecccccEEEEEECCCCcE
Q psy17133         88 VHSMVAHLDAVTSLAVDPQGLY  109 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~  109 (116)
                      +.........+....+++++..
T Consensus       196 ~W~~~~~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          196 LWIQNYASPVVAFYVWQREGLR  217 (369)
T ss_dssp             EEEEECSSCEEEEEECTTSSCE
T ss_pred             EEEecCCCceEEEEEecCCceE
Confidence            8776633322334456667653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.87  E-value=0.0012  Score=40.33  Aligned_cols=102  Identities=10%  Similarity=0.015  Sum_probs=63.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~   83 (116)
                      ..+.+++|.+.++.++++-...+.|+.++.........+...      ......+++++.+. +.++-...+.|.+.++.
T Consensus       116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~------~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d  189 (386)
T 3v65_B          116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLD  189 (386)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS------CSCCCCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred             CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC------CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence            456788898744445555556788999998755433333322      23467888887654 45555567889988877


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .......+...-.....++++|.+..|+.
T Consensus       190 g~~~~~l~~~~l~~P~giavdp~~g~ly~  218 (386)
T 3v65_B          190 GAHRKVLLWQSLEKPRAIALHPMEGTIYW  218 (386)
T ss_dssp             SCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred             CCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence            44333333333346788899986665543

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=97.87  E-value=2.4e-05  Score=47.31  Aligned_cols=68  Identities=10%  Similarity=0.092  Sum_probs=44.0

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      ++..+++++.++.++.||..+|+.+..+...        .+.+..+..++..+++++.|+.++.||.++|+.+..+
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~--------~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~   75 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKED--------PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL   75 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEECC--------CSCCCC-----CCEEECTTTCCEEEC-----CCSEEC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecCC--------CceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee
Confidence            3478888899999999999999988777652        1222333456777777788999999999888765544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.83  E-value=0.0013  Score=39.57  Aligned_cols=102  Identities=10%  Similarity=0.015  Sum_probs=64.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~   83 (116)
                      ..+.+++|++.++..+++-...+.|+.++.........+...      ......+++.+.+ .+.++-...+.|.+.++.
T Consensus        73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~------~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d  146 (349)
T 3v64_C           73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG------LESPGGLAVDWVHDKLYWTDSGTSRIEVANLD  146 (349)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC------CCCccEEEEecCCCeEEEEcCCCCeEEEEcCC
Confidence            346788898744445555556788999998755433333322      2346789999864 455555667899999987


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ...........-.....++++|.+..|+.
T Consensus       147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~  175 (349)
T 3v64_C          147 GAHRKVLLWQSLEKPRAIALHPMEGTIYW  175 (349)
T ss_dssp             SCSCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred             CCceEEEEeCCCCCcceEEEecCcCeEEE
Confidence            44333333333346788999986655543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=97.81  E-value=0.00068  Score=44.37  Aligned_cols=96  Identities=16%  Similarity=0.158  Sum_probs=60.1

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcC----cCCCCc-------------------------eeEEEEcCCCCEE
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFG----VSGGGG-------------------------INRVVCHPTLPLT   68 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~----~~~~~~-------------------------i~~~~~~~~~~~~   68 (116)
                      ..++.++.++.++++|..+|+.+..++.....    ....+.                         -..++++|+..++
T Consensus       328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~  407 (677)
T 1kb0_A          328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV  407 (677)
T ss_dssp             EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred             eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence            56788889999999999999987766532100    000000                         1256788887777


Q ss_pred             EEEeC-------------------------------------------CCeEEEEECCCCeEEEEeecccccEEEEEECC
Q psy17133         69 ITAHD-------------------------------------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        69 ~~~~~-------------------------------------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      ++...                                           .+.|..||+.+++.+..... ...+....+..
T Consensus       408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~  486 (677)
T 1kb0_A          408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTT  486 (677)
T ss_dssp             EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEE
T ss_pred             EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEe
Confidence            66432                                           16899999999998877652 22233333444


Q ss_pred             CCcEEEeee
Q psy17133        106 QGLYILSGT  114 (116)
Q Consensus       106 ~~~~l~~~s  114 (116)
                      .+..++.++
T Consensus       487 ~g~~v~~g~  495 (677)
T 1kb0_A          487 AGNVVFQGT  495 (677)
T ss_dssp             TTTEEEEEC
T ss_pred             CCCEEEEEC
Confidence            555555544

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=97.78  E-value=0.00038  Score=44.65  Aligned_cols=80  Identities=18%  Similarity=0.049  Sum_probs=52.7

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEEC
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVD  104 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~  104 (116)
                      ++.+..||..+++.+-+++...       .+....+...+..++.++.|+.++.+|.++++.+..+..... ...-+.+.
T Consensus       443 ~g~l~a~D~~tG~~~W~~~~~~-------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~  515 (571)
T 2ad6_A          443 MGQIRAFDLTTGKAKWTKWEKF-------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYS  515 (571)
T ss_dssp             CEEEEEECTTTCCEEEEEEESS-------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred             CCeEEEEECCCCCEEEEecCCC-------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEE
Confidence            4789999999998877775431       112222223456777788999999999999999988763321 11223455


Q ss_pred             CCCcEEEe
Q psy17133        105 PQGLYILS  112 (116)
Q Consensus       105 ~~~~~l~~  112 (116)
                      .+++.++.
T Consensus       516 ~~G~~yv~  523 (571)
T 2ad6_A          516 FKGKQYIG  523 (571)
T ss_dssp             ETTEEEEE
T ss_pred             ECCEEEEE
Confidence            77776554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.72  E-value=0.0019  Score=38.30  Aligned_cols=102  Identities=9%  Similarity=-0.029  Sum_probs=61.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCC---CceeEE-EecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLET---GKPVVR-IDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~---~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~   79 (116)
                      ..+.+++|++.++..+++-..++.|+.++...   +..... +...      ......+++++.+. +.++-...+.|.+
T Consensus        30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~------~~~p~glavd~~~~~ly~~d~~~~~I~~  103 (316)
T 1ijq_A           30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVSV  103 (316)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC------CCCcCEEEEeecCCeEEEEECCCCEEEE
Confidence            45678899884444555555678899999875   122222 2222      23467899987554 4455566889999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+...................++++|.+..|+.
T Consensus       104 ~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~  136 (316)
T 1ijq_A          104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW  136 (316)
T ss_dssp             EETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred             EeCCCCceEEEEECCCCCcceEEeCCCCCEEEE
Confidence            998744333333323346788999986665543

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.72  E-value=0.0012  Score=43.66  Aligned_cols=72  Identities=7%  Similarity=-0.035  Sum_probs=46.7

Q ss_pred             eEEEEccCCCcEEEEeeCC-----CeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeE
Q psy17133          8 TSIDFVRDESTKMVTAFDN-----SACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHI   77 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i   77 (116)
                      ..+.|+| +++.|+....+     .+|+++++.+++.  +..+....     ......+.|+||+++|+....   ...|
T Consensus       224 ~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-----~~~~~~~~~SpDg~~l~~~~~~~~~~~l  297 (751)
T 2xe4_A          224 GEIVWGP-DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN-----PLFSAFMYKAADTNTLCIGSQSPETAEV  297 (751)
T ss_dssp             SCCEECS-STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC-----TTCEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred             eeEEEec-CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC-----CceEEEEEECCCCCEEEEEecCCCCceE
Confidence            4678999 66666665543     3688888876642  23333221     234567899999998776542   4568


Q ss_pred             EEEECCCC
Q psy17133         78 RFFDNVSG   85 (116)
Q Consensus        78 ~~~~~~~~   85 (116)
                      .++|+.++
T Consensus       298 ~~~d~~~~  305 (751)
T 2xe4_A          298 HLLDLRKG  305 (751)
T ss_dssp             EEEESSSC
T ss_pred             EEEECCCC
Confidence            88998765

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.71  E-value=0.00091  Score=39.26  Aligned_cols=92  Identities=9%  Similarity=0.066  Sum_probs=59.4

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      .++...+ ++ .+..++.++.+..+|.. ++.+..+...      ...+..+...+++.+++..   +.+..+| .+++.
T Consensus       140 ~~~~~~~-~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~------~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~  206 (330)
T 3hxj_A          140 ATPIVSE-DG-TIYVGSNDNYLYAINPD-GTEKWRFKTN------DAITSAASIGKDGTIYFGS---DKVYAIN-PDGTE  206 (330)
T ss_dssp             SCCEECT-TS-CEEEECTTSEEEEECTT-SCEEEEEECS------SCCCSCCEECTTCCEEEES---SSEEEEC-TTSCE
T ss_pred             eeeEEcC-CC-EEEEEcCCCEEEEECCC-CCEeEEEecC------CCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcE
Confidence            3444444 33 45566777889999988 7766666544      3356666777777755443   7788888 67776


Q ss_pred             EEEeecccccEEEEEECCCCcEEEe
Q psy17133         88 VHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        88 ~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.........+.++...+++...+.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~g~l~v~  231 (330)
T 3hxj_A          207 KWNFYAGYWTVTRPAISEDGTIYVT  231 (330)
T ss_dssp             EEEECCSSCCCSCCEECTTSCEEEE
T ss_pred             EEEEccCCcceeceEECCCCeEEEE
Confidence            6665544455667777777665543

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.67  E-value=0.0022  Score=37.66  Aligned_cols=93  Identities=12%  Similarity=-0.035  Sum_probs=59.7

Q ss_pred             ccCCCcE-EEEeeCCCeEEEEECCC-Cce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133         13 VRDESTK-MVTAFDNSACVLFDLET-GKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus        13 ~~~~~~~-l~~~~~~~~v~i~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~   88 (116)
                      +| ++.. +++-...+.|..++... ++.  ...+...       .....++++++|.++++....+.|.+++.. ++..
T Consensus       175 s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~  245 (306)
T 2p4o_A          175 KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTT  245 (306)
T ss_dssp             EE-ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEE
T ss_pred             Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEE
Confidence            66 4444 45555678899999864 321  1122111       235678999999887777778899999975 6653


Q ss_pred             EE--eecccccEEEEEEC---CCCcEEEeee
Q psy17133         89 HS--MVAHLDAVTSLAVD---PQGLYILSGT  114 (116)
Q Consensus        89 ~~--~~~~~~~v~~~~~~---~~~~~l~~~s  114 (116)
                      ..  +........+++|.   |+++.|+.++
T Consensus       246 ~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~  276 (306)
T 2p4o_A          246 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT  276 (306)
T ss_dssp             EEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred             EEeecccccCCceEEEEecccCCCCEEEEEC
Confidence            32  22223468899998   8877766543

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.67  E-value=0.00054  Score=44.09  Aligned_cols=79  Identities=19%  Similarity=0.131  Sum_probs=52.6

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEEC
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVD  104 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~  104 (116)
                      .+.+..||..+++.+-+.+...       ....-.+...+.+++.++.|+.++.+|.++|+.+..+...... ..-+.|.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~  537 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHL-------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWE  537 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-------CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred             cceEEEEECCCCCEEEEecCCC-------CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEE
Confidence            5789999999998877665431       1111111224667778999999999999999999887743321 1225566


Q ss_pred             CCCcEEE
Q psy17133        105 PQGLYIL  111 (116)
Q Consensus       105 ~~~~~l~  111 (116)
                      .+|+..+
T Consensus       538 ~~G~qYv  544 (582)
T 1flg_A          538 QDGEQYL  544 (582)
T ss_dssp             ETTEEEE
T ss_pred             ECCEEEE
Confidence            7877543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.66  E-value=0.0026  Score=38.27  Aligned_cols=100  Identities=14%  Similarity=0.010  Sum_probs=61.8

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE-eCC-CeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA-HDD-RHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~d-~~i~~~~~~   83 (116)
                      .+..+++.+.++.++++-...+.|.+.+.........+...      -.....++++|.+..++.. ... +.|...++.
T Consensus       117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~------l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d  190 (349)
T 3v64_C          117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS------LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  190 (349)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT------CSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC------CCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence            45678887645555566666778999988743322223222      2457899999976555444 444 788888876


Q ss_pred             CCeEEEEe-ecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSM-VAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .. ....+ ...-.....++++|++..|..
T Consensus       191 G~-~~~~~~~~~~~~PnGla~d~~~~~lY~  219 (349)
T 3v64_C          191 GS-GRRIIADTHLFWPNGLTIDYAGRRMYW  219 (349)
T ss_dssp             SC-SCEESCCSSCSCEEEEEEETTTTEEEE
T ss_pred             CC-CcEEEEECCCCCcceEEEeCCCCEEEE
Confidence            33 33333 222345788999987666554

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.66  E-value=0.003  Score=38.78  Aligned_cols=103  Identities=9%  Similarity=-0.045  Sum_probs=63.3

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      .+.+.+++|++.++..+++-...+.|+.+++...    .....+...      ......+++.+. +.+.++-...+.|.
T Consensus       111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~------~~~p~glavD~~~~~lY~~d~~~~~I~  184 (400)
T 3p5b_L          111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVS  184 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC------CCCcccEEEEecCCceEEEECCCCeEE
Confidence            3567788998844444455456788888888642    122222222      345788999985 45555656678999


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.++........+...-.....++++|.+..|+.
T Consensus       185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~  218 (400)
T 3p5b_L          185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW  218 (400)
T ss_dssp             EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEE
T ss_pred             EEeCCCCceEEEEeCCCCCcceEEEecccCeEEE
Confidence            9998755444334333445788999986555543

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=97.65  E-value=0.0017  Score=38.13  Aligned_cols=86  Identities=6%  Similarity=0.037  Sum_probs=59.4

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA   97 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~   97 (116)
                      ..+..++.++.+..+|.. ++........      ...+..+...+++. +..++.++.+..+|.. ++.+..+......
T Consensus       108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~------~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~  178 (330)
T 3hxj_A          108 DILYVTSMDGHLYAINTD-GTEKWRFKTK------KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI  178 (330)
T ss_dssp             TEEEEECTTSEEEEECTT-SCEEEEEECS------SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred             CEEEEEecCCEEEEEcCC-CCEEEEEcCC------CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence            456667778899999988 7766666544      33456666777776 5556678999999988 8776666544445


Q ss_pred             EEEEEECCCCcEEEe
Q psy17133         98 VTSLAVDPQGLYILS  112 (116)
Q Consensus        98 v~~~~~~~~~~~l~~  112 (116)
                      +..+...+++..++.
T Consensus       179 ~~~~~~d~~g~l~v~  193 (330)
T 3hxj_A          179 TSAASIGKDGTIYFG  193 (330)
T ss_dssp             CSCCEECTTCCEEEE
T ss_pred             eeeeEEcCCCEEEEE
Confidence            666677777776543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=97.62  E-value=0.0047  Score=40.63  Aligned_cols=81  Identities=14%  Similarity=0.137  Sum_probs=54.6

Q ss_pred             EEEEccCCCcEEEEeeCCC-------------------eEEEEECCCCceeEEEecCCcC---cCCCCceeEEEEcCCCC
Q psy17133          9 SIDFVRDESTKMVTAFDNS-------------------ACVLFDLETGKPVVRIDSSQFG---VSGGGGINRVVCHPTLP   66 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~-------------------~v~i~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~   66 (116)
                      .+.++| +...++.+..++                   .|..+|..+|+.+-.++.....   ......+.......+++
T Consensus       239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~  317 (689)
T 1yiq_A          239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK  317 (689)
T ss_dssp             CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred             ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence            567888 567777777665                   3999999999988877642100   00012222233333554


Q ss_pred             ---EEEEEeCCCeEEEEECCCCeEEEE
Q psy17133         67 ---LTITAHDDRHIRFFDNVSGKLVHS   90 (116)
Q Consensus        67 ---~~~~~~~d~~i~~~~~~~~~~~~~   90 (116)
                         .++.++.++.++++|.++|+.+..
T Consensus       318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~  344 (689)
T 1yiq_A          318 PRKVLMQAPKNGFFYVIDRATGELLSA  344 (689)
T ss_dssp             EEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred             EEEEEEEECCCCeEEEEECCCCCEecc
Confidence               788888999999999999998754

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.58  E-value=0.004  Score=38.04  Aligned_cols=101  Identities=14%  Similarity=-0.003  Sum_probs=60.6

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CC-CeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DD-RHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d-~~i~~~~~~   83 (116)
                      .+..+++.+.++.++++-...+.|.+.++........+...      ......++++|.+..++... .. +.|..+++.
T Consensus       160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~------l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d  233 (386)
T 3v65_B          160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS------LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD  233 (386)
T ss_dssp             CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS------CSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC------CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence            34567777644455555556677888887643322233222      24678999999766555444 34 688888876


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ...........-.....++++|++..|+.
T Consensus       234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~  262 (386)
T 3v65_B          234 GSGRRIIADTHLFWPNGLTIDYAGRRMYW  262 (386)
T ss_dssp             SCSCEEEECSSCSCEEEEEEEGGGTEEEE
T ss_pred             CCCcEEEEECCCCCeeeEEEeCCCCEEEE
Confidence            43333222223345788999987665554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.53  E-value=0.004  Score=36.90  Aligned_cols=101  Identities=13%  Similarity=0.008  Sum_probs=62.8

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-CeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-RHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-~~i~~~~~~   83 (116)
                      .+..+++.+.+++..++-...+.|.+++.........+...      ......++++|.+..++.... . +.|...++.
T Consensus        78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~------~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d  151 (316)
T 1ijq_A           78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  151 (316)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT------TCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred             CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC------CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence            45778887634455555566788999998743332223322      246789999997665555443 3 688888876


Q ss_pred             CCeEEEEee-cccccEEEEEECCCCcEEEee
Q psy17133         84 SGKLVHSMV-AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        84 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~  113 (116)
                       |.....+. ..-.....+++++++..|+.+
T Consensus       152 -G~~~~~~~~~~~~~P~gla~d~~~~~lY~~  181 (316)
T 1ijq_A          152 -GVDIYSLVTENIQWPNGITLDLLSGRLYWV  181 (316)
T ss_dssp             -SCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             -CCCeEEEEECCCCCceEEEEeccCCEEEEE
Confidence             44333332 233467889999877666543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.52  E-value=0.004  Score=36.77  Aligned_cols=104  Identities=12%  Similarity=0.064  Sum_probs=61.8

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeC-----------
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHD-----------   73 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~-----------   73 (116)
                      .+..+.+.+++ ..|+++.....+..++..+++ +..+...... ........+++.+ +|.+.++-..           
T Consensus        81 ~p~gi~~~~~~-g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~-~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~  157 (322)
T 2fp8_A           81 RTYDISYNLQN-NQLYIVDCYYHLSVVGSEGGH-ATQLATSVDG-VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI  157 (322)
T ss_dssp             CEEEEEEETTT-TEEEEEETTTEEEEECTTCEE-CEEEESEETT-EECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred             CCceEEEcCCC-CcEEEEECCCCEEEEeCCCCE-EEEecccCCC-CcccccceEEEecCCCEEEEECCccccccccccee
Confidence            46788888623 445555444568888876443 2223211000 0013468899999 8987766432           


Q ss_pred             ------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         74 ------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 ------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                            ++.|..++..+++...... .......++++|+++.|+.+
T Consensus       158 ~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~  202 (322)
T 2fp8_A          158 MDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVA  202 (322)
T ss_dssp             HHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEE
T ss_pred             hcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEE
Confidence                  3678888987776543322 22345678999999866543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.43  E-value=0.0074  Score=37.68  Aligned_cols=105  Identities=14%  Similarity=0.246  Sum_probs=69.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc------------eeEEEecCCcCcCCCCceeEEEEcCC---CCEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK------------PVVRIDSSQFGVSGGGGINRVVCHPT---LPLTI   69 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~   69 (116)
                      +.+..+..+| +|++|+..+ +..|.+..+..+.            ..+.+.........+..|..+.|||-   +..++
T Consensus        66 ~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV  143 (452)
T 3pbp_A           66 DDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV  143 (452)
T ss_dssp             CTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred             CceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence            3577899999 888888776 5588888887332            11223221100011467999999994   56899


Q ss_pred             EEeCCCeEEEEECCCCe--EEEEee---------cccccEEEEEECCCCcEEEe
Q psy17133         70 TAHDDRHIRFFDNVSGK--LVHSMV---------AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        70 ~~~~d~~i~~~~~~~~~--~~~~~~---------~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +...|+.|++||+....  +. .+.         .....+.+++|.+++-.|..
T Consensus       144 VLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv  196 (452)
T 3pbp_A          144 VLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYC  196 (452)
T ss_dssp             EEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred             EEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence            99999999999987421  11 221         12246889999998776654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=97.41  E-value=0.0051  Score=35.38  Aligned_cols=92  Identities=12%  Similarity=0.012  Sum_probs=60.2

Q ss_pred             ceEEEEccCCCcEEEEeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~   83 (116)
                      ...+.|++  +.++.+.+..  ..|+.+|+.+++.+......       .......+.+.+..++. .-.++.+.++|.+
T Consensus        23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-------~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~   93 (243)
T 3mbr_X           23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVP-------PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA   93 (243)
T ss_dssp             EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-------TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred             cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-------CCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence            45788875  3555555554  58999999999998888654       23333434444444444 4458899999999


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEE
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYI  110 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l  110 (116)
                      +.+.+..+... ..-..++  +++..|
T Consensus        94 tl~~~~ti~~~-~~Gwglt--~dg~~L  117 (243)
T 3mbr_X           94 TLTPRARFRYP-GEGWALT--SDDSHL  117 (243)
T ss_dssp             TTEEEEEEECS-SCCCEEE--ECSSCE
T ss_pred             cCcEEEEEeCC-CCceEEe--eCCCEE
Confidence            99999888743 2334454  344433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.41  E-value=0.0073  Score=37.09  Aligned_cols=102  Identities=10%  Similarity=-0.032  Sum_probs=63.4

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~~   83 (116)
                      .+..+++.+.++++.++-...+.|.+.++........+...      ......++++|.+..++....  .+.|...++.
T Consensus       160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~------~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d  233 (400)
T 3p5b_L          160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN  233 (400)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS------SCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred             CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC------CCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence            45677777634455555566778888888744433333322      345789999997665555442  4678888876


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ...........-.....+++++++..|+.+
T Consensus       234 G~~~~~~~~~~l~~P~glavd~~~~~lY~a  263 (400)
T 3p5b_L          234 GVDIYSLVTENIQWPNGITLDLLSGRLYWV  263 (400)
T ss_dssp             SCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             CCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence            433333333233567889999877766543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.39  E-value=0.0071  Score=36.42  Aligned_cols=110  Identities=15%  Similarity=0.080  Sum_probs=69.8

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEE---cCCCCEEEEEe--------
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVC---HPTLPLTITAH--------   72 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~--------   72 (116)
                      -...++.|.+.++.++++.-..+.|..|+...+..... +..-.........+..+.+   .|+++++++..        
T Consensus        13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~   92 (334)
T 2p9w_A           13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA   92 (334)
T ss_dssp             CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred             cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence            34678899874444445444789999999875543322 2210000000124678999   68888777544        


Q ss_pred             -----CCCeEEEEECC---CCeEEEEee--c-----------ccccEEEEEECCCCcEEEeee
Q psy17133         73 -----DDRHIRFFDNV---SGKLVHSMV--A-----------HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 -----~d~~i~~~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~s  114 (116)
                           .+..+..+|+.   +++.+....  .           .......++..++|+..++++
T Consensus        93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s  155 (334)
T 2p9w_A           93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA  155 (334)
T ss_dssp             SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred             ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence                 26789999998   777655443  1           112478999999999888765

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.39  E-value=0.0067  Score=36.13  Aligned_cols=100  Identities=7%  Similarity=-0.055  Sum_probs=61.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEEC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~~~~   82 (116)
                      .+..+++.+.++..+++-...+.|.+++.... ....+. ..      ......++++|.+..++...  ..+.|...++
T Consensus        80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~------~~~P~giavdp~~g~ly~td~~~~~~I~r~~~  152 (318)
T 3sov_A           80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQE------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGM  152 (318)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSS------CSSEEEEEEEGGGTEEEEEECSSSCEEEEEET
T ss_pred             CccEEEEEcCCCeEEEEECCCCEEEEEECCCC-cEEEEEeCC------CCCccEEEEeCCCCEEEEEecCCCCEEEEEEc
Confidence            45567777644555566566778888888643 333332 22      34678999999766555554  3578888887


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ............-.....++++|++..|+.
T Consensus       153 dG~~~~~~~~~~l~~Pnglavd~~~~~lY~  182 (318)
T 3sov_A          153 DGSSRFIIINSEIYWPNGLTLDYEEQKLYW  182 (318)
T ss_dssp             TSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred             CCCCeEEEEECCCCCccEEEEeccCCEEEE
Confidence            633222222222345788999987666554

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=97.38  E-value=0.0021  Score=42.09  Aligned_cols=76  Identities=11%  Similarity=0.106  Sum_probs=51.6

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~  105 (116)
                      +.|..||..+++.+-..+...       ......+...+.+++.++.++.++.||.++++.+..+...... ..-+.+..
T Consensus       438 g~l~A~D~~tG~~~W~~~~~~-------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~  510 (668)
T 1kv9_A          438 GALLAWDPVKQKAAWKVPYPT-------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL  510 (668)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             ceEEEEeCCCCcEEEEccCCC-------CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence            779999999998877766441       2222333446778888999999999999999998887643211 11233445


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       511 ~G~~  514 (668)
T 1kv9_A          511 AGRQ  514 (668)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            6653

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.37  E-value=0.0075  Score=36.38  Aligned_cols=102  Identities=15%  Similarity=0.288  Sum_probs=59.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeC-C----
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHD-D----   74 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~-d----   74 (116)
                      ..+..++|.| ++.+++ +...+.|++++  +++..  ..+...   .........++++|+   +..++.+.. .    
T Consensus        31 ~~P~~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~---~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~  103 (352)
T 2ism_A           31 EVPWALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVY---HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL  103 (352)
T ss_dssp             SCEEEEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCC---CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred             CCceEEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEe---ecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence            4567899999 677544 45568999998  34321  122110   001346889999998   444444332 2    


Q ss_pred             -CeEEEEECCCCeE------EEEee---cccccEEEEEECCCCcEEEee
Q psy17133         75 -RHIRFFDNVSGKL------VHSMV---AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        75 -~~i~~~~~~~~~~------~~~~~---~~~~~v~~~~~~~~~~~l~~~  113 (116)
                       +.|..++...+..      +..+.   ........++|.|+|...++.
T Consensus       104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~  152 (352)
T 2ism_A          104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT  152 (352)
T ss_dssp             EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred             ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence             6787888764321      11122   111234689999999876654

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.36  E-value=0.0062  Score=35.27  Aligned_cols=107  Identities=10%  Similarity=0.091  Sum_probs=63.6

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCC--eEEEEEC-CCCceeEEEecCC-cCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNS--ACVLFDL-ETGKPVVRIDSSQ-FGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~--~v~i~~~-~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      +.....++|+| .++.|.++.+..  .++.|+- ...+.+..+.... ........+..++++|. +.+++.....+.+.
T Consensus       120 N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~  198 (255)
T 3qqz_A          120 NCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQ  198 (255)
T ss_dssp             SSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred             cCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEE
Confidence            34468999999 566666665543  4455541 1111222221100 00001235789999997 55667777788999


Q ss_pred             EEECCCCeEEEEeeccc---------ccEEEEEECCCCcEEEe
Q psy17133         79 FFDNVSGKLVHSMVAHL---------DAVTSLAVDPQGLYILS  112 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~  112 (116)
                      .+|.+ ++.+..+.-..         .....++|.++|+..++
T Consensus       199 ~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv  240 (255)
T 3qqz_A          199 EVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV  240 (255)
T ss_dssp             EECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred             EEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence            99976 66655554221         25689999999986655

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.32  E-value=0.0094  Score=37.07  Aligned_cols=101  Identities=16%  Similarity=0.225  Sum_probs=57.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCC---Ce-EEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcC-CCCEEEEEeCCCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDN---SA-CVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHP-TLPLTITAHDDRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~---~~-v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~i~   78 (116)
                      ..+..+++++ +++++++...+   .. +...+...+.. ...+. .      -.....++++| ++.+.++-..++.|+
T Consensus       182 ~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~------~~~P~giavd~~~G~lyv~d~~~~~V~  253 (433)
T 4hw6_A          182 GQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLC-N------ARGAKTCAVHPQNGKIYYTRYHHAMIS  253 (433)
T ss_dssp             SCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEE-E------CSSBCCCEECTTTCCEEECBTTCSEEE
T ss_pred             CCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCCeecccccc-c------cCCCCEEEEeCCCCeEEEEECCCCEEE
Confidence            3467888988 66644443321   12 33333322211 11121 1      23467788999 677666666788999


Q ss_pred             EEECCCCeEEEEe-e-cccccEEEEEECCCCcEEEee
Q psy17133         79 FFDNVSGKLVHSM-V-AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        79 ~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .++..++.....+ . ........++|+|++++|+.+
T Consensus       254 ~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva  290 (433)
T 4hw6_A          254 SYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII  290 (433)
T ss_dssp             EECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred             EEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence            9998877663332 2 112233569999999855543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.29  E-value=0.017  Score=38.77  Aligned_cols=103  Identities=10%  Similarity=-0.041  Sum_probs=64.5

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~   82 (116)
                      ..+..+++.+.+++++++-...+.|.+.++.... ...+....     ......|+++|....|+....  .+.|...++
T Consensus       471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~-----l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~  544 (791)
T 3m0c_C          471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREN-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL  544 (791)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECT-----TCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred             CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCC-----CCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence            4566788877344555666677889999987443 33333221     245889999998655555443  378888888


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ............-.....|++++....|+.+
T Consensus       545 dG~~~~~lv~~~l~~P~GLavD~~~~~LYwa  575 (791)
T 3m0c_C          545 NGVDIYSLVTENIQWPNGITLDLLSGRLYWV  575 (791)
T ss_dssp             TSCCEEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred             CCCceEEEEeCCCCCceEEEEecCCCeEEEE
Confidence            7443333333333567889998766665543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.29  E-value=0.017  Score=38.77  Aligned_cols=102  Identities=9%  Similarity=-0.030  Sum_probs=61.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCC----ceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETG----KPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~   79 (116)
                      ..+.+++|.+.++.++++-...+.|+.+++...    .....+...      ......+++.+.+. +.++-...+.|.+
T Consensus       424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~------l~~P~GLAvD~~~~~LY~tD~~~~~I~v  497 (791)
T 3m0c_C          424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVSV  497 (791)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC------CCCcceeeeeecCCcEEEEecCCCeEEE
Confidence            456778888744444455555677888887642    222222222      24577899998765 4455556789999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .++........+.........|+++|....|+.
T Consensus       498 ~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYw  530 (791)
T 3m0c_C          498 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW  530 (791)
T ss_dssp             EETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred             EeCCCCeEEEEEeCCCCCcceEEEecCCCCEEE
Confidence            998754443333333446788999987555543

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.26  E-value=0.011  Score=35.80  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=59.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc-eeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEEeC----C--
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK-PVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITAHD----D--   74 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~----d--   74 (116)
                      ..+..++|.| ++.+++ +...+.|++++. +++ .+..+....   ........++++|+   +..++....    +  
T Consensus        29 ~~P~~ia~~p-dG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~---~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~  102 (354)
T 3a9g_A           29 EVPWSIAPLG-GGRYLV-TERPGRLVLISP-SGKKLVASFDVAN---VGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH  102 (354)
T ss_dssp             SCEEEEEEEE-TTEEEE-EETTTEEEEECS-SCEEEEEECCCCC---STTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred             CCCeEEEEcC-CCeEEE-EeCCCEEEEEeC-CCceEeeccceee---cCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence            4578899999 666444 455689999873 454 222221100   00346889999997   444443332    3  


Q ss_pred             --CeEEEEECCCC--e---E--E-EEeec-ccccEEEEEECCCCcEEEee
Q psy17133         75 --RHIRFFDNVSG--K---L--V-HSMVA-HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        75 --~~i~~~~~~~~--~---~--~-~~~~~-~~~~v~~~~~~~~~~~l~~~  113 (116)
                        +.|..++....  .   .  + ..+.. .......++|.|+|.++++.
T Consensus       103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~  152 (354)
T 3a9g_A          103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITT  152 (354)
T ss_dssp             EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEEC
T ss_pred             cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEE
Confidence              56777776543  1   1  1 11221 11234679999999877764

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.22  E-value=0.0077  Score=34.34  Aligned_cols=99  Identities=7%  Similarity=-0.132  Sum_probs=61.6

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-----EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-----VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      .+..++|+| ++.+.++  .++.++..+..+.+..     .+..+...    -.....+.+.|++.+.++  .|+.|.-+
T Consensus        42 ~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~G----w~~F~a~~fD~~G~LYav--~dG~iyr~  112 (236)
T 1tl2_A           42 NFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGG----WNQFQFLFFDPNGYLYAV--SKDKLYKA  112 (236)
T ss_dssp             TCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSC----GGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred             cceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccc----cccceEEEECCCCCEEEe--CCCEEEEe
Confidence            567899999 7786666  6778887776542211     11111101    123578999999988877  45888877


Q ss_pred             ECCCCe-------EEEEeecccccEEEEEECCCCcEEEee
Q psy17133         81 DNVSGK-------LVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        81 ~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +..+..       ....-...-..+..+.|.|+|.+.+..
T Consensus       113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~  152 (236)
T 1tl2_A          113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH  152 (236)
T ss_dssp             SCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred             CCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence            754311       111111123467889999999887665

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=97.19  E-value=0.012  Score=34.81  Aligned_cols=105  Identities=12%  Similarity=0.142  Sum_probs=63.7

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC--------------cCCCCceeEEEEcC-CCCEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG--------------VSGGGGINRVVCHP-TLPLTIT   70 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~--------------~~~~~~i~~~~~~~-~~~~~~~   70 (116)
                      .+.++.|.+ +++.+.++..++.|..|+..+++. ..+......              ......+..+++.+ ++.+++ 
T Consensus        20 ~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-   96 (322)
T 2fp8_A           20 APNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-   96 (322)
T ss_dssp             CCCCEECCT-TCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-
T ss_pred             CceEEEEcC-CCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-
Confidence            467788988 677777888889999999875443 333211000              00012468899998 565444 


Q ss_pred             EeCCCeEEEEECCCCeEEEEeec----ccccEEEEEECC-CCcEEEee
Q psy17133         71 AHDDRHIRFFDNVSGKLVHSMVA----HLDAVTSLAVDP-QGLYILSG  113 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~  113 (116)
                      +...+.+..++..+++.......    .......+++.+ +|+.+++.
T Consensus        97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d  144 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTD  144 (322)
T ss_dssp             EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEE
T ss_pred             EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEEC
Confidence            44445588888775543221111    113467899999 99877653

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.19  E-value=0.015  Score=37.89  Aligned_cols=101  Identities=10%  Similarity=0.038  Sum_probs=61.8

Q ss_pred             EEEEccCCCcEEEEeeCCC-----------eEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C
Q psy17133          9 SIDFVRDESTKMVTAFDNS-----------ACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D   74 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~-----------~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d   74 (116)
                      ..++.+.+++.++.|+.+.           .+.+||..+++.  +..+....     ......+++.+++++++.|+. +
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-----~~~~~~~~~~~~g~lyv~GG~~~  264 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-----DMFCPGISMDGNGQIVVTGGNDA  264 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-----CCSSCEEEECTTSCEEEECSSST
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC-----CCccccccCCCCCCEEEeCCCCC
Confidence            4555653556777765322           578899887653  33333221     223445777889998888874 5


Q ss_pred             CeEEEEECCCCeEEEEeeccccc-EEEEEECCCCcEEEeee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~s  114 (116)
                      ..+.+||..+.+-...-.....+ -..++..+++++++.|+
T Consensus       265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG  305 (656)
T 1k3i_A          265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGG  305 (656)
T ss_dssp             TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECC
T ss_pred             CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeC
Confidence            68999999877654332211111 23455667888888877

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.18  E-value=0.012  Score=34.99  Aligned_cols=99  Identities=14%  Similarity=0.106  Sum_probs=59.6

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+++|.+.++..+.+-...+.|+.++...... ...+...      -.....+++.+.+ .+.++-...+.|.++++..
T Consensus        37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~------l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG  110 (318)
T 3sov_A           37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG  110 (318)
T ss_dssp             EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC------CCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence            457788874445555555677888888875432 1222222      2346788998754 4555556678999999874


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      ................++++|.+..|+
T Consensus       111 ~~~~~l~~~~~~~P~giavdp~~g~ly  137 (318)
T 3sov_A          111 SLRKVLFWQELDQPRAIALDPSSGFMY  137 (318)
T ss_dssp             CSCEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred             CcEEEEEeCCCCCccEEEEeCCCCEEE
Confidence            333222323334567888887654444

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.16  E-value=0.014  Score=35.16  Aligned_cols=105  Identities=12%  Similarity=0.088  Sum_probs=68.2

Q ss_pred             ceEEEE---ccCCCcEEEEee-------------CCCeEEEEECC---CCceeEEEecCCcCcC-------CCCceeEEE
Q psy17133          7 PTSIDF---VRDESTKMVTAF-------------DNSACVLFDLE---TGKPVVRIDSSQFGVS-------GGGGINRVV   60 (116)
Q Consensus         7 v~~~~~---~~~~~~~l~~~~-------------~~~~v~i~~~~---~~~~~~~~~~~~~~~~-------~~~~i~~~~   60 (116)
                      +..+.|   .| ++.++++..             .+..+..||+.   +++.+....-.....+       .......++
T Consensus        65 ~sGl~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva  143 (334)
T 2p9w_A           65 MSGLSLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA  143 (334)
T ss_dssp             EEEEEESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred             eeEEEEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence            578899   58 556666533             15779999998   7776655442100000       013478999


Q ss_pred             EcCCCCEEEEEeCC-CeEEEEECCCCeEEEEeec------ccccEEEEEECCCCcEEEee
Q psy17133         61 CHPTLPLTITAHDD-RHIRFFDNVSGKLVHSMVA------HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        61 ~~~~~~~~~~~~~d-~~i~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ..++|...++.+.. +.|...+.. ++.+..+..      .......|+++|+++.|+..
T Consensus       144 vD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~  202 (334)
T 2p9w_A          144 QDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAF  202 (334)
T ss_dssp             ECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred             ECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence            99999988888877 888888866 333333221      11236689999999888754

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.13  E-value=0.02  Score=36.40  Aligned_cols=99  Identities=20%  Similarity=0.226  Sum_probs=60.4

Q ss_pred             CceEEEE-------ccCCCcEEEEeeCCC-------eEEEEECCC-Ccee-----EEEecCCcCcCCCCceeEEEEcCC-
Q psy17133          6 TPTSIDF-------VRDESTKMVTAFDNS-------ACVLFDLET-GKPV-----VRIDSSQFGVSGGGGINRVVCHPT-   64 (116)
Q Consensus         6 ~v~~~~~-------~~~~~~~l~~~~~~~-------~v~i~~~~~-~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~-   64 (116)
                      .+..++|       ++ +++.|+++...+       .+.+++... +...     ..+...       .....++++|+ 
T Consensus       187 ~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-------~~p~giavdp~~  258 (496)
T 3kya_A          187 RIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-------KQCNGATIHPIN  258 (496)
T ss_dssp             BEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-------SCCCCEEECTTT
T ss_pred             CCcEEEEeecccccCC-CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-------CCceEEEEcCCC
Confidence            4788999       98 667565554332       366665443 2221     222211       24567888995 


Q ss_pred             CCEEEEEeCCCeEEEEECC-------CCeE-----------EEE-ee-cccccEEEEEECCCCcEEEe
Q psy17133         65 LPLTITAHDDRHIRFFDNV-------SGKL-----------VHS-MV-AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        65 ~~~~~~~~~d~~i~~~~~~-------~~~~-----------~~~-~~-~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.++++-..++.|..+|+.       ++..           ... +. ........++|+|++++|+.
T Consensus       259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYv  326 (496)
T 3kya_A          259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYF  326 (496)
T ss_dssp             CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred             CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEE
Confidence            5566667778899999987       5543           222 22 22345678999999995443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=97.12  E-value=0.0099  Score=35.75  Aligned_cols=69  Identities=7%  Similarity=0.086  Sum_probs=45.3

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVA   93 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~   93 (116)
                      ..++.++.++.+..+|..+++.+.......     .........  .+..++.++.++.+..+|.++++.+.....
T Consensus       278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~  346 (376)
T 3q7m_A          278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLL-----HRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV  346 (376)
T ss_dssp             TEEEEEETTCCEEEEETTTCCEEEEECTTT-----TSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEeecccC-----CCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence            455566667788888888887666554210     111222222  245778888899999999999998876654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.12  E-value=0.014  Score=34.33  Aligned_cols=76  Identities=11%  Similarity=0.091  Sum_probs=52.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--CeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD--RHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d--~~i~~~~~   82 (116)
                      ..+..++|++ +++.+++...++.|..+|... +....+...       ..+..+++.++++++++....  ..|..++.
T Consensus        32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~-------~~p~gia~~~dG~l~vad~~~~~~~v~~~d~  102 (306)
T 2p4o_A           32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHATVE-------GKVSGLAFTSNGDLVATGWNADSIPVVSLVK  102 (306)
T ss_dssp             CCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEEECS-------SEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEEeCC-------CCceeEEEcCCCcEEEEeccCCcceEEEEcC
Confidence            4567889999 677666666788999999864 443333322       458899999999966665432  35777777


Q ss_pred             CCCeEEE
Q psy17133         83 VSGKLVH   89 (116)
Q Consensus        83 ~~~~~~~   89 (116)
                      .+++...
T Consensus       103 ~~g~~~~  109 (306)
T 2p4o_A          103 SDGTVET  109 (306)
T ss_dssp             TTSCEEE
T ss_pred             CCCeEEE
Confidence            7776543

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.09  E-value=0.011  Score=38.47  Aligned_cols=79  Identities=10%  Similarity=-0.014  Sum_probs=50.7

Q ss_pred             CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEEC
Q psy17133         26 NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVD  104 (116)
Q Consensus        26 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~  104 (116)
                      .+.+..||+.+++.+-..+...       ....-.+...+.+++.++.|+.++.+|.++|+.+..+..... ...-+.|.
T Consensus       452 ~G~l~A~D~~tG~~~W~~~~~~-------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~  524 (599)
T 1w6s_A          452 LGQIKAYNAITGDYKWEKMERF-------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYT  524 (599)
T ss_dssp             CEEEEEECTTTCCEEEEEEESS-------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred             cCeEEEEECCCCCEEeEecCCC-------CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEE
Confidence            4678889998888776664321       111111222466777789999999999999999988763322 11224555


Q ss_pred             CCCcEEE
Q psy17133        105 PQGLYIL  111 (116)
Q Consensus       105 ~~~~~l~  111 (116)
                      .+|+..+
T Consensus       525 ~~G~qyv  531 (599)
T 1w6s_A          525 HKGTQYV  531 (599)
T ss_dssp             ETTEEEE
T ss_pred             eCCEEEE
Confidence            6777443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.05  E-value=0.0016  Score=42.91  Aligned_cols=100  Identities=11%  Similarity=-0.024  Sum_probs=55.9

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC--CCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD--DRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--d~~i~~~~~~~   84 (116)
                      +..+++.+.+++++++-...+.|.++++.... +..+....     ......++++|.+..|+....  .+.|..+++..
T Consensus       455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~-----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG  528 (699)
T 1n7d_A          455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQ-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG  528 (699)
T ss_dssp             CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCS-----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred             cceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCC-----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence            45677765344555555567788888876443 33332211     234678899987554444332  26777777653


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ..........-.....++++|++..|+.
T Consensus       529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~  556 (699)
T 1n7d_A          529 VDIYSLVTENIQWPNGITLDLLSGRLYW  556 (699)
T ss_dssp             CCCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred             CCeeEEEeCCCCCccEEEEeccCCEEEE
Confidence            2222222222234667889987655443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.03  E-value=0.024  Score=35.58  Aligned_cols=109  Identities=12%  Similarity=0.136  Sum_probs=60.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCC---CCEEEEEe-C-----
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPT---LPLTITAH-D-----   73 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~-~-----   73 (116)
                      ..+..++|.| +++++++-...+.|++++..+++...  .+...............++++|+   +..|+... .     
T Consensus        27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            4567899999 77766665444578888765554322  22211000001356789999995   44444332 1     


Q ss_pred             -------CCeEEEEECCCC--e-----EE-EEee-cccccEEEEEECCCCcEEEeee
Q psy17133         74 -------DRHIRFFDNVSG--K-----LV-HSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 -------d~~i~~~~~~~~--~-----~~-~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                             ...|.-++....  .     .+ ..+. ...+....++|.|||.++++.+
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence                   234555554321  1     11 1122 1123578999999998777644

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=97.00  E-value=0.032  Score=36.43  Aligned_cols=102  Identities=14%  Similarity=0.090  Sum_probs=60.9

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce-eEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEE
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP-VVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFD   81 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~   81 (116)
                      .+.+.+++|++.++..+++-...+.|..+++..... ...+...      ......+++++.+. +.++-...+.|.+.+
T Consensus        39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~------~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~  112 (619)
T 3s94_A           39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG------LLSPDGLACDWLGEKLYWTDSETNRIEVSN  112 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC------CCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence            345678899884444444545577888888864432 2222222      24688999998655 555556678999999


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      +............-.....++++|.+..|+
T Consensus       113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly  142 (619)
T 3s94_A          113 LDGSLRKVLFWQELDQPRAIALDPSSGFMY  142 (619)
T ss_dssp             TTSCSCEEEECSSCSCCCCEEEETTTTEEE
T ss_pred             CCCCCEEEEEeCCCCCCceEEEecCCCeEE
Confidence            874433333323334577888888654443

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=96.99  E-value=0.021  Score=34.31  Aligned_cols=74  Identities=5%  Similarity=0.008  Sum_probs=48.0

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-CC--CCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-SG--GGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-~~--~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      ..+++++.++.++.+|..+++.+..+....... .+  ...+.. ....++..++.++.++.|..+|.++|+.+....
T Consensus        54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~  130 (376)
T 3q7m_A           54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK  130 (376)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence            566777778899999999998876665431100 00  011211 112235567778889999999999998876654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.98  E-value=0.0015  Score=42.96  Aligned_cols=100  Identities=10%  Similarity=-0.000  Sum_probs=56.0

Q ss_pred             CCceEEEEccCCCcEEEEe-eCCCeEEEEECCC----CceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTA-FDNSACVLFDLET----GKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      ..+.+++|.+ ....|+.+ ...+.|+.+++..    ......+...      ......+++.+. +.++++-...+.|.
T Consensus       406 ~~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~------~~~P~glavD~~~g~LY~tD~~~~~I~  478 (699)
T 1n7d_A          406 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD------IQAPDGLAVDWIHSNIYWTDSVLGTVS  478 (699)
T ss_dssp             TTCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC------C--CCCEECCCSSSBCEECCTTTSCEE
T ss_pred             cceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC------CCCcceEEEEeeCCcEEEEeccCCeEE
Confidence            4466788887 44444444 4567788888764    1111111111      123567888865 44555555678899


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      ++++........+.........++++|.+.+|+
T Consensus       479 v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly  511 (699)
T 1n7d_A          479 VADTKGVKRKTLFREQGSKPRAIVVDPVHGFMY  511 (699)
T ss_dssp             EEBSSSCCEEEECCCSSCCCCCEECCSSSSCCE
T ss_pred             EEecCCCceEEEEeCCCCCcceEEEccCCCcEE
Confidence            999875444333332234567788888654443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.96  E-value=0.035  Score=36.30  Aligned_cols=101  Identities=11%  Similarity=-0.004  Sum_probs=63.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~   83 (116)
                      +.+.+++|++.++...++-..++.|+.+++........+...      ......+++++.+. +..+-...+.|.+.++.
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g------~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d  110 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFG------LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD  110 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCC------CCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence            456789999845455555556788999998744333333322      23577899987655 44555567899999987


Q ss_pred             CCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      ...........-.....++++|....|+
T Consensus       111 G~~~~~l~~~~l~~P~~iavdp~~G~lY  138 (628)
T 4a0p_A          111 GQHRQVLVWKDLDSPRALALDPAEGFMY  138 (628)
T ss_dssp             STTCEEEECSSCCCEEEEEEETTTTEEE
T ss_pred             CCcEEEEEeCCCCCcccEEEccCCCeEE
Confidence            4433222323334678899998544444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=96.92  E-value=0.028  Score=36.70  Aligned_cols=97  Identities=10%  Similarity=-0.043  Sum_probs=56.6

Q ss_pred             CCcEEEEeeCCC-----------eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC----------
Q psy17133         16 ESTKMVTAFDNS-----------ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD----------   74 (116)
Q Consensus        16 ~~~~l~~~~~~~-----------~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d----------   74 (116)
                      ++++++.|+.+.           .+.+||..+.+........-.   ....-......|++++++.++.+          
T Consensus       410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp---~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~  486 (656)
T 1k3i_A          410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY---FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTP  486 (656)
T ss_dssp             TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS---SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSB
T ss_pred             CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC---CCcccCCeEECCCCCEEEECCcccCcCcCCCCc
Confidence            567777776432           577888776654332201100   01123455667899999888754          


Q ss_pred             -CeEEEEECCCCeEEEEee--cccccEEEEEECCCCcEEEeeec
Q psy17133         75 -RHIRFFDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        75 -~~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                       ..+.+||..+.+....-.  ..........+.|+++.++.|+.
T Consensus       487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence             568999998776543211  11112234456799999998874

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=96.91  E-value=0.027  Score=34.19  Aligned_cols=109  Identities=15%  Similarity=0.168  Sum_probs=62.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC---CCEEEEE---eCCCeEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT---LPLTITA---HDDRHIR   78 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~---~~d~~i~   78 (116)
                      ..+..++|.| ++.++++--..+.|++++..+++....................++++|+   ...++..   ..++.|.
T Consensus        32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            4578899999 7776666555899999987655432111110000011456899999995   3334332   2355666


Q ss_pred             EEECCCC----------eEE-EEee-cccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSG----------KLV-HSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~----------~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      -|....+          +.+ ..+. ...+....+.|.|||.++++.+
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G  158 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG  158 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence            6665431          111 1222 1122346799999998777643

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.88  E-value=0.028  Score=33.98  Aligned_cols=107  Identities=12%  Similarity=0.132  Sum_probs=57.2

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC-cCcCCCCceeEEEEcCC---CCEEEEEe-C------
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FGVSGGGGINRVVCHPT---LPLTITAH-D------   73 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~-~------   73 (116)
                      ..+..++|.| +++.++++...+.|++++.. ++....+.... ...........++++|+   +..++... .      
T Consensus        18 ~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~   95 (353)
T 2g8s_A           18 DHPWALAFLP-DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK   95 (353)
T ss_dssp             SSEEEEEECS-TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred             CCcEEEEEcC-CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence            4567899999 77734455567899999853 43211111100 00001345789999996   44444332 2      


Q ss_pred             -CCeEEEEECCCC--e--EEEE-eec------ccccEEEEEECCCCcEEEee
Q psy17133         74 -DRHIRFFDNVSG--K--LVHS-MVA------HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 -d~~i~~~~~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~  113 (116)
                       ...|..++....  .  .... +..      .......++|.|||.++++.
T Consensus        96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~  147 (353)
T 2g8s_A           96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL  147 (353)
T ss_dssp             EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred             ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence             235666665432  1  1111 111      11224679999999766654

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=96.84  E-value=0.046  Score=35.93  Aligned_cols=82  Identities=15%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             EEEEccCCCcEEEEeeCCC-------------------eEEEEECCCCceeEEEecCCcC---cCCCCceeEEEEcCCCC
Q psy17133          9 SIDFVRDESTKMVTAFDNS-------------------ACVLFDLETGKPVVRIDSSQFG---VSGGGGINRVVCHPTLP   66 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~-------------------~v~i~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~   66 (116)
                      .+.+.| +...++.+..++                   .|..+|..+++.+-.++.....   ...........+..+++
T Consensus       234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~  312 (668)
T 1kv9_A          234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK  312 (668)
T ss_dssp             CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred             ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence            467777 556777776554                   4899999999988777642100   00012233333334664


Q ss_pred             ---EEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         67 ---LTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        67 ---~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                         .++.++.++.++++|.++|+.+...
T Consensus       313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~  340 (668)
T 1kv9_A          313 PRKVLMQAPKNGFFYVLDRTNGKLISAE  340 (668)
T ss_dssp             EEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred             EEEEEEEECCCCEEEEEECCCCCEeccc
Confidence               6888889999999999999987543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.81  E-value=0.037  Score=34.39  Aligned_cols=73  Identities=11%  Similarity=0.071  Sum_probs=49.0

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~   83 (116)
                      .+..++++|+++.++++-..++.|+.++..++..........     ......++++|+++.+ ++-...+.|..++..
T Consensus       227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d  300 (430)
T 3tc9_A          227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----SGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD  300 (430)
T ss_dssp             SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----SSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----CCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence            456788888555666666678899999987654322222211     2346789999999955 445567889988754

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=96.63  E-value=0.053  Score=33.77  Aligned_cols=74  Identities=16%  Similarity=0.106  Sum_probs=47.6

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV   83 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~   83 (116)
                      .+..++++|+++.++++-..++.|+.++..++.....+.....    ......++++|++..+ ++-...+.|+.++..
T Consensus       229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~----~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d  303 (433)
T 4hw6_A          229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT----KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN  303 (433)
T ss_dssp             SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC----CSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred             CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC----CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence            3556778874555555555678899999886765233321110    1223579999999855 445557899998864

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.60  E-value=0.051  Score=33.11  Aligned_cols=103  Identities=13%  Similarity=0.236  Sum_probs=67.8

Q ss_pred             CCceEEEE--ccCCCc-EEEEeeCCCeEEEEECC-------CCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          5 GTPTSIDF--VRDEST-KMVTAFDNSACVLFDLE-------TGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         5 ~~v~~~~~--~~~~~~-~l~~~~~~~~v~i~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      ..+..+++  +|..+. ++++...++.+..|++.       +.+.+++|...       +.+..+...+....|+.+-++
T Consensus       128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-------sq~EgcvvDd~~g~Lyv~eEd  200 (355)
T 3amr_A          128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-------SQTEGMAADDEYGRLYIAEED  200 (355)
T ss_dssp             SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-------SCEEEEEEETTTTEEEEEETT
T ss_pred             CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-------CCcceEEEcCCCCeEEEeccc
Confidence            45667777  663343 57777788999888873       23456666654       467888888888889999888


Q ss_pred             CeEEEEECC-----CCeEEEEee-cc-cccEEEEEE--CCCCc-EEEeee
Q psy17133         75 RHIRFFDNV-----SGKLVHSMV-AH-LDAVTSLAV--DPQGL-YILSGT  114 (116)
Q Consensus        75 ~~i~~~~~~-----~~~~~~~~~-~~-~~~v~~~~~--~~~~~-~l~~~s  114 (116)
                      .-|..++.+     +++.+.... ++ ...+..+++  .++++ +|++.+
T Consensus       201 ~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs  250 (355)
T 3amr_A          201 EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS  250 (355)
T ss_dssp             TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred             ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence            777777754     344554442 21 235777777  56666 666554

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.56  E-value=0.034  Score=36.17  Aligned_cols=102  Identities=12%  Similarity=0.107  Sum_probs=66.5

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCC------ce-------eEEEecCCcCcCCCCceeEEEEcCCCCEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETG------KP-------VVRIDSSQFGVSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~------~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      ..+-.+..+| +|++++.++ .+.++.++|....      +.       ..+.+.       .-...-.+|.++|....+
T Consensus       323 ksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-------GlGPlHt~Fd~~G~aYTt  394 (638)
T 3sbq_A          323 KNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-------GLGPLHTTFDGRGNAYTT  394 (638)
T ss_dssp             SSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-------CSCEEEEEECSSSEEEEE
T ss_pred             CCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-------CCcccEEEECCCCceEee
Confidence            4456788899 677776655 6889999998732      11       112221       234677889999955555


Q ss_pred             EeCCCeEEEEECCCC----------eEEEEeecccccEEEEE-----ECCCCcEEEeee
Q psy17133         71 AHDDRHIRFFDNVSG----------KLVHSMVAHLDAVTSLA-----VDPQGLYILSGT  114 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~s  114 (116)
                      .--|..|.-|++...          ..+..+..|.+.-...+     -.|+|++|++.+
T Consensus       395 lfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          395 LFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             ETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred             eeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence            667999999998753          45555655555433222     257899998865

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.55  E-value=0.077  Score=34.69  Aligned_cols=102  Identities=12%  Similarity=0.021  Sum_probs=62.5

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCC-CEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL-PLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~d~~i~~~~~~   83 (116)
                      ..+.+++|.+.++..+++-...+.|+.++.........+...      -.....+++.+.+ .+..+-...+.|.+.++.
T Consensus       349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~------~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~  422 (619)
T 3s94_A          349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQ------IAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN  422 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECC------CCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence            456788888744444455456788888888743333333222      2457789998754 455555667899999987


Q ss_pred             CCeEEEEeecccccEEEEEECCC-CcEEEe
Q psy17133         84 SGKLVHSMVAHLDAVTSLAVDPQ-GLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~  112 (116)
                      ...........-.....+++.|. |.++.+
T Consensus       423 G~~~~~l~~~~l~~P~~iavdp~~G~ly~t  452 (619)
T 3s94_A          423 GTMRKILISEDLEEPRAIVLDPMVGYMYWT  452 (619)
T ss_dssp             SCSCEEEECTTCCSEEEEEEETTTTEEEEE
T ss_pred             CCeEEEEEECCCCCeeeEEEEcCCCcEEEe
Confidence            44322222223346788999986 444333

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.54  E-value=0.056  Score=32.91  Aligned_cols=98  Identities=15%  Similarity=0.097  Sum_probs=61.6

Q ss_pred             CceEEEEccCCCcEEEEee-----------------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE
Q psy17133          6 TPTSIDFVRDESTKMVTAF-----------------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT   68 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~-----------------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~   68 (116)
                      .+.++.+.+ ++.+.++..                 ..+.++.++.  ++ +..+...      -...+.++|+||++.+
T Consensus       166 ~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~------l~~pNGia~spDg~~l  235 (355)
T 3sre_A          166 SVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEG------FDFANGINISPDGKYV  235 (355)
T ss_dssp             SEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEE------ESSEEEEEECTTSSEE
T ss_pred             CCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecC------CcccCcceECCCCCEE
Confidence            456778887 667666543                 1245555554  32 2222221      1357899999999877


Q ss_pred             EEEe-CCCeEEEEECC-CCeE--EEEeecccccEEEEEECC-CCcEEEeee
Q psy17133         69 ITAH-DDRHIRFFDNV-SGKL--VHSMVAHLDAVTSLAVDP-QGLYILSGT  114 (116)
Q Consensus        69 ~~~~-~d~~i~~~~~~-~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~s  114 (116)
                      +.+. ..+.|..|++. .++.  .+.+ ...+..-.++.++ +|++.+++.
T Consensus       236 Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~  285 (355)
T 3sre_A          236 YIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH  285 (355)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred             EEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence            6654 57899999985 3433  2233 2345678899999 599877553

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=96.45  E-value=0.056  Score=34.90  Aligned_cols=27  Identities=15%  Similarity=0.091  Sum_probs=21.6

Q ss_pred             EEEEeeCCCeEEEEECCCCceeEEEec
Q psy17133         19 KMVTAFDNSACVLFDLETGKPVVRIDS   45 (116)
Q Consensus        19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~   45 (116)
                      .++.++.++.++++|..+++.+..++.
T Consensus       318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~  344 (571)
T 2ad6_A          318 LLSHIDRNGILYTLNRENGNLIVAEKV  344 (571)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             EEEEeCCCcEEEEEECCCCCEEeeecc
Confidence            456677899999999999988776653

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=96.10  E-value=0.17  Score=33.87  Aligned_cols=103  Identities=6%  Similarity=0.011  Sum_probs=65.4

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++...+ ++..|..|..++-+.+++..+++. ..+...... .....|.++...+++.+.+...  +-+.+|+.++
T Consensus       406 ~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~-l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~  480 (795)
T 4a2l_A          406 NNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQ-LVNENVYAILPDGEGNLWLGTL--SALVRFNPEQ  480 (795)
T ss_dssp             SCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCE-EEECTTTSC-CSCSCEEEEEECSSSCEEEEES--SCEEEEETTT
T ss_pred             ccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCC-cCCCeeEEEEECCCCCEEEEec--CceeEEeCCC
Confidence            4577777776 556366667667799999887653 333321000 1134688898888888666554  3488899887


Q ss_pred             CeEEEEeec------ccccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVA------HLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~------~~~~v~~~~~~~~~~~l~~  112 (116)
                      ++.......      ....|.++...++++..+.
T Consensus       481 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig  514 (795)
T 4a2l_A          481 RSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG  514 (795)
T ss_dssp             TEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred             CeEEEccccccccccCCceEEEEEECCCCCEEEE
Confidence            765433211      1246888888888886654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=95.86  E-value=0.17  Score=31.98  Aligned_cols=109  Identities=10%  Similarity=0.124  Sum_probs=59.7

Q ss_pred             CCceEEEEccCCCc-EEEEeeCCCeEEEEECCCCc---eeEEEecCCcC---cCCCCceeEEEEcCC----CCEEEEEeC
Q psy17133          5 GTPTSIDFVRDEST-KMVTAFDNSACVLFDLETGK---PVVRIDSSQFG---VSGGGGINRVVCHPT----LPLTITAHD   73 (116)
Q Consensus         5 ~~v~~~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~---~~~~~~i~~~~~~~~----~~~~~~~~~   73 (116)
                      ..+..|+|.| ++. .++++...+.|++++.....   .+..+......   .........++++|+    +.+.++-+.
T Consensus        14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~   92 (463)
T 2wg3_C           14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT   92 (463)
T ss_dssp             SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred             CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence            4567899999 664 56666778999999754221   22222110000   001346789999996    433333221


Q ss_pred             --C----------CeEEEEECCC----------CeEEEEee--cccccEEEEEECCCCcEEEeee
Q psy17133         74 --D----------RHIRFFDNVS----------GKLVHSMV--AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 --d----------~~i~~~~~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                        +          ..|.-|.+..          .+.+..+.  ........++|.|||.+.++.+
T Consensus        93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~G  157 (463)
T 2wg3_C           93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILG  157 (463)
T ss_dssp             CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEEC
T ss_pred             CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeC
Confidence              1          1444455532          12222222  1233567899999998777654

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=95.81  E-value=0.21  Score=32.75  Aligned_cols=107  Identities=11%  Similarity=0.008  Sum_probs=63.1

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~   83 (116)
                      +.+.+++|.+.++..+.+-...+.|+.++.........+............+..+++...+..| .+-...+.|.+.++.
T Consensus       340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~  419 (628)
T 4a0p_A          340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD  419 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence            4567888988444444444457788888876433222332200000002357899999886644 566667899999986


Q ss_pred             CCeEEEEee-cccccEEEEEECC-CCcEEEe
Q psy17133         84 SGKLVHSMV-AHLDAVTSLAVDP-QGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~~  112 (116)
                       |+....+. ......+.+++.| .|.++.+
T Consensus       420 -G~~~~~l~~~~l~~Pr~iavdp~~g~ly~t  449 (628)
T 4a0p_A          420 -GRSVGVVLKGEQDRPRAVVVNPEKGYMYFT  449 (628)
T ss_dssp             -SCEEEEEEECTTCCEEEEEEETTTTEEEEE
T ss_pred             -CCeEEEEEeCCCCceeeEEEecCCCeEEEe
Confidence             55544443 3345688999998 4544443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=95.75  E-value=0.22  Score=32.51  Aligned_cols=82  Identities=12%  Similarity=0.055  Sum_probs=51.7

Q ss_pred             EEEccCCCcEEEEeeCC----------------CeEEEEECCCCceeEEEecCCcCc---CCCCceeEEEEc-CCC---C
Q psy17133         10 IDFVRDESTKMVTAFDN----------------SACVLFDLETGKPVVRIDSSQFGV---SGGGGINRVVCH-PTL---P   66 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~----------------~~v~i~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~-~~~---~   66 (116)
                      .++.+ +...++.+..+                ..+..+|..+++.+-.++......   .......-+... .+|   +
T Consensus       246 ~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~  324 (599)
T 1w6s_A          246 YAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK  324 (599)
T ss_dssp             CEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred             eeEeC-CCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence            45556 44566655543                379999999999887776431100   000111223332 567   4


Q ss_pred             EEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         67 LTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        67 ~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      .++.++.++.+.+.|.++|+.+....
T Consensus       325 ~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          325 LLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEECCCcEEEEEECCCCCEeeccc
Confidence            67778899999999999999887654

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=95.63  E-value=0.21  Score=32.66  Aligned_cols=58  Identities=19%  Similarity=0.204  Sum_probs=42.8

Q ss_pred             eeEEEEcCCCCEEEEEeCC------------CeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133         56 INRVVCHPTLPLTITAHDD------------RHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        56 i~~~~~~~~~~~~~~~~~d------------~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~  113 (116)
                      .--+.|+|.|.+++.-..+            +.+.+.+..+++..+-+... ...+..++|+||++.|+..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence            4568999999977665432            45677777778877666543 4689999999999988754

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=95.38  E-value=0.35  Score=32.37  Aligned_cols=105  Identities=12%  Similarity=0.094  Sum_probs=65.5

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCC-cC--cCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQ-FG--VSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~--~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      ..|.++...+ ++. |..|..++-+..|+..+++.. .+.... ..  ......|.++...+++..+..+..++-|..++
T Consensus       357 ~~V~~i~~d~-~g~-lWiGt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d  433 (795)
T 4a2l_A          357 NVVSCIVEDK-DKN-LWIGTNDGGLNLYNPITQRFT-SYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILH  433 (795)
T ss_dssp             SSEEEEEECT-TSC-EEEEESSSCEEEECTTTCCEE-EECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred             CeeEEEEECC-CCC-EEEEECCCCeEEEcCCCCcEE-EEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEe
Confidence            3577777766 444 555666767899998765433 222110 00  00024688998888888555666667799999


Q ss_pred             CCCCeEEEEee----cccccEEEEEECCCCcEEEe
Q psy17133         82 NVSGKLVHSMV----AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        82 ~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .++++......    .....|.++...++++..+.
T Consensus       434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig  468 (795)
T 4a2l_A          434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG  468 (795)
T ss_dssp             TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred             CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence            88776544321    12346888888888886554

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=95.31  E-value=0.3  Score=31.22  Aligned_cols=103  Identities=12%  Similarity=0.098  Sum_probs=57.8

Q ss_pred             CceEEEEccC-CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE-------cCCCCEEEEEeCCC--
Q psy17133          6 TPTSIDFVRD-ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC-------HPTLPLTITAHDDR--   75 (116)
Q Consensus         6 ~v~~~~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~d~--   75 (116)
                      .+..++|+|. +++++++......|++.|..++...........   .......++|       ++++..++.+...+  
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~---~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~  216 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI---PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK  216 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS---SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc---ccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence            4678999983 344444444456788899886654443332210   0235789999       99998666665443  


Q ss_pred             -----eEEEEECCC-CeEE-----EEeecccccEEEEEECCCCcEEEe
Q psy17133         76 -----HIRFFDNVS-GKLV-----HSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        76 -----~i~~~~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                           .+.+++... +...     +.+.. ......++.+|++..|+.
T Consensus       217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYv  263 (496)
T 3kya_A          217 GDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYF  263 (496)
T ss_dssp             GGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEE
T ss_pred             cccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEE
Confidence                 355665333 2221     22221 123456788995554443

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=94.62  E-value=0.61  Score=31.19  Aligned_cols=100  Identities=13%  Similarity=0.043  Sum_probs=61.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++...+ ++. |..+..++-+..++..+++. ..+....   .....|.++...+++.+.+.. . +-+..++..+
T Consensus       407 ~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~---~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~  478 (781)
T 3v9f_A          407 NSVLCSLKDS-EGN-LWFGTYLGNISYYNTRLKKF-QIIELEK---NELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLAS  478 (781)
T ss_dssp             SBEEEEEECT-TSC-EEEEETTEEEEEECSSSCEE-EECCSTT---TCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSS
T ss_pred             cceEEEEECC-CCC-EEEEeccCCEEEEcCCCCcE-EEeccCC---CCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCC
Confidence            4567777665 444 44456556788888876543 3332110   003468888888888755544 3 5688899877


Q ss_pred             CeEEEEeecc-----cccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVAH-----LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~  112 (116)
                      ++........     ...+.++...++|++.+.
T Consensus       479 ~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig  511 (781)
T 3v9f_A          479 KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG  511 (781)
T ss_dssp             SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred             CeEEecccCcccccccceeEEEEEcCCCCEEEE
Confidence            6554332211     356888888888886654

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=94.17  E-value=1  Score=31.87  Aligned_cols=38  Identities=13%  Similarity=0.187  Sum_probs=31.2

Q ss_pred             ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      .+.+++..++..++++.+.|+++++|++.+++++.+..
T Consensus       239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            34555666788899999999999999999998887643

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=94.10  E-value=0.53  Score=28.45  Aligned_cols=57  Identities=12%  Similarity=0.080  Sum_probs=33.0

Q ss_pred             eeEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCe------------EEEEeecccccEEEEEECC-CCcE
Q psy17133         56 INRVVCHPTLPLTITAHDD-------------RHIRFFDNVSGK------------LVHSMVAHLDAVTSLAVDP-QGLY  109 (116)
Q Consensus        56 i~~~~~~~~~~~~~~~~~d-------------~~i~~~~~~~~~------------~~~~~~~~~~~v~~~~~~~-~~~~  109 (116)
                      ...+.|.|+|.+.++.+..             +.|.-++.....            ....+...-.....++|+| +++.
T Consensus       132 ~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l  211 (353)
T 2g8s_A          132 GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNAL  211 (353)
T ss_dssp             CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEE
T ss_pred             CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCE
Confidence            4579999999766665432             466666654220            1111221122478899999 6766


Q ss_pred             EEe
Q psy17133        110 ILS  112 (116)
Q Consensus       110 l~~  112 (116)
                      +++
T Consensus       212 ~~~  214 (353)
T 2g8s_A          212 WLN  214 (353)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            654

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=94.05  E-value=0.77  Score=30.11  Aligned_cols=60  Identities=17%  Similarity=0.188  Sum_probs=43.0

Q ss_pred             CceeEEEEcCCCCEEEEEeC------------CCeEEEEECCCCeEEEEeecc-cccEEEEEECCCCcEEEee
Q psy17133         54 GGINRVVCHPTLPLTITAHD------------DRHIRFFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~------------d~~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~  113 (116)
                      .....+.++++|.+.+....            .+.+..++..+++....+... ...+..++|+||++.|+.+
T Consensus       476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence            34567999999987774322            236777777778876655432 3578999999999988764

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=94.04  E-value=0.69  Score=29.50  Aligned_cols=94  Identities=9%  Similarity=0.034  Sum_probs=63.4

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEE
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLV   88 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~   88 (116)
                      .-.+| ..+.++.-. ...+.++|+++.+.++.+.-.       ..|....|-.+.. ++.. .+..|+-|++.. ..+.
T Consensus        71 AIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~-------e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~s~P~  139 (494)
T 1bpo_A           71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPV  139 (494)
T ss_dssp             EEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECS-------SCCCEEEEEETTE-EEEE-CSSEEEEEESSSSCCCE
T ss_pred             eeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecC-------CCceEEEecCCCe-EEEE-cCCeeEEecccCCCCch
Confidence            34567 555555544 788999999998888887765       3567777765443 3332 356899999963 3455


Q ss_pred             EEeecc----cccEEEEEECCCCcEEEeee
Q psy17133         89 HSMVAH----LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        89 ~~~~~~----~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+..|    ...|.+-..+++.+|++..+
T Consensus       140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~G  169 (494)
T 1bpo_A          140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTG  169 (494)
T ss_dssp             EEEECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred             hheecchhcccceEEEEEECCCCCeEEEEe
Confidence            555543    34677788899999987543

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.03  E-value=0.57  Score=28.59  Aligned_cols=100  Identities=15%  Similarity=0.283  Sum_probs=55.9

Q ss_pred             CceEEEEccC-CCc-EEEEe-eC--CCeEEEEECCCC-ce---eEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---
Q psy17133          6 TPTSIDFVRD-EST-KMVTA-FD--NSACVLFDLETG-KP---VVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---   73 (116)
Q Consensus         6 ~v~~~~~~~~-~~~-~l~~~-~~--~~~v~i~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---   73 (116)
                      .+..+.+.++ ++. +|++. ..  +..+.+|++... ..   +..+.+..     -...+.+.+.++|.+.++..-   
T Consensus       113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-----~~~pND~~v~~~G~fyvt~~~~ft  187 (355)
T 3sre_A          113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-----LPSVNDIVAVGPEHFYATNDHYFI  187 (355)
T ss_dssp             CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT-----CSSEEEEEEEETTEEEEEESCSCS
T ss_pred             eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC-----CCCCceEEEeCCCCEEecCCcEeC
Confidence            4556666542 222 34333 33  456777766532 22   23343331     346889999999987776541   


Q ss_pred             --------------CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         74 --------------DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        74 --------------d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                                    .+.+..++.  ++.. .+...-...+.++|+||++.|+.+
T Consensus       188 d~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYva  238 (355)
T 3sre_A          188 DPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIA  238 (355)
T ss_dssp             SHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEE
T ss_pred             CcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEE
Confidence                          234444444  4332 222233457899999999987754

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=93.41  E-value=1.3  Score=30.72  Aligned_cols=37  Identities=14%  Similarity=0.209  Sum_probs=31.7

Q ss_pred             ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q psy17133         55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~   91 (116)
                      .+.++...++..++++.+.|+++++|++.+++++.+.
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            4567777788889999999999999999999887764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=93.26  E-value=0.95  Score=28.64  Aligned_cols=76  Identities=12%  Similarity=0.154  Sum_probs=48.8

Q ss_pred             CCCceEEEEccCC--CcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcC---cCCCCceeEEEEcCCCCEEEEEe--CC
Q psy17133          4 NGTPTSIDFVRDE--STKMVTAFDNSACVLFDLETG--KPVVRIDSSQFG---VSGGGGINRVVCHPTLPLTITAH--DD   74 (116)
Q Consensus         4 ~~~v~~~~~~~~~--~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~--~d   74 (116)
                      ..+|..+.|+|-.  +..|++-..|+.|++||+...  ++. .++.....   -.....+.+++|.+++-.++...  ..
T Consensus       124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~  202 (452)
T 3pbp_A          124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEG  202 (452)
T ss_dssp             CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTS
T ss_pred             CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCC
Confidence            4678999999852  347888889999999999742  222 33211100   01124678899998877666654  56


Q ss_pred             CeEEEE
Q psy17133         75 RHIRFF   80 (116)
Q Consensus        75 ~~i~~~   80 (116)
                      |.|+-.
T Consensus       203 GDIYAl  208 (452)
T 3pbp_A          203 GDIFAF  208 (452)
T ss_dssp             CEEEEE
T ss_pred             CCEEEE
Confidence            666544

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=92.98  E-value=0.93  Score=27.77  Aligned_cols=109  Identities=8%  Similarity=0.142  Sum_probs=61.9

Q ss_pred             CCceEEEEccC---CCc---EEEEee-C--CCeEEEEECC-CCceeEEEecCCcCcCCC-CceeEEEE--cCC-CC-EEE
Q psy17133          5 GTPTSIDFVRD---EST---KMVTAF-D--NSACVLFDLE-TGKPVVRIDSSQFGVSGG-GGINRVVC--HPT-LP-LTI   69 (116)
Q Consensus         5 ~~v~~~~~~~~---~~~---~l~~~~-~--~~~v~i~~~~-~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~-~~-~~~   69 (116)
                      +.+..+...|.   ++.   ++++.. .  +.++.+|++. ....+..+..-....... ..+..+|+  +|. ++ +++
T Consensus        68 g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yaf  147 (355)
T 3amr_A           68 GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAM  147 (355)
T ss_dssp             SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEE
T ss_pred             CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEE
Confidence            55666666651   111   233333 3  5789999663 222344442100000001 35667777  774 54 677


Q ss_pred             EEeCCCeEEEEECC-------CCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         70 TAHDDRHIRFFDNV-------SGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        70 ~~~~d~~i~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ....++.+..|++.       +.+.++.+.. ...+..+...+....|+.+-
T Consensus       148 V~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~e  198 (355)
T 3amr_A          148 VTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAE  198 (355)
T ss_dssp             EECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEE
T ss_pred             EECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEec
Confidence            78888999999882       3455666653 34677888888766666553

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=92.87  E-value=0.87  Score=27.11  Aligned_cols=101  Identities=10%  Similarity=0.020  Sum_probs=55.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      +.+..+.+.+ ++..++++. .+.++.-.-..++.-..+....     ...+..+.+.+++.+++. +.++.+++.+...
T Consensus       163 ~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~-----~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~  234 (327)
T 2xbg_A          163 GVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTT-----SRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDN  234 (327)
T ss_dssp             CCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEECCS-----SSCEEEEEECTTSCEEEE-ETTTEEEEEETTE
T ss_pred             cceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECCCCC-----CCccceeEECCCCCEEEE-eCCceEEEecCCC
Confidence            4567788888 566666554 4444443211122222222111     346788888888876644 4577777664333


Q ss_pred             CeEEEEee-c---ccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSMV-A---HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~~-~---~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++.-..+. .   ....+..+.+.+++..++.+
T Consensus       235 G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g  267 (327)
T 2xbg_A          235 SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG  267 (327)
T ss_dssp             EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred             CCeeEeccCCcccCCcceEEEEecCCCEEEEEe
Confidence            43332222 1   12347888898887777654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=92.64  E-value=1  Score=27.31  Aligned_cols=101  Identities=16%  Similarity=0.084  Sum_probs=54.2

Q ss_pred             CCceEEEEccC---CCcEEEEeeC---C----CeEEEEECCCC--c---e--e-EEEecCCcCcCCCCceeEEEEcCCCC
Q psy17133          5 GTPTSIDFVRD---ESTKMVTAFD---N----SACVLFDLETG--K---P--V-VRIDSSQFGVSGGGGINRVVCHPTLP   66 (116)
Q Consensus         5 ~~v~~~~~~~~---~~~~l~~~~~---~----~~v~i~~~~~~--~---~--~-~~~~~~~~~~~~~~~i~~~~~~~~~~   66 (116)
                      +.+..++++|+   ++.+.++-..   +    ..|..++....  .   .  + ..+....     ......+.|.|+|.
T Consensus        73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~-----~h~~~~l~~~pDG~  147 (354)
T 3a9g_A           73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAY-----IHNGGRIRFGPDGM  147 (354)
T ss_dssp             CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCS-----SCCCCCEEECTTSC
T ss_pred             CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCC-----CcCCceEEECCCCc
Confidence            45788999994   3444444332   2    56777776543  1   1  1 1122110     12346799999998


Q ss_pred             EEEEEeC-------------CCeEEEEECCCCe--------EEEEee-cccccEEEEEECC-CCcEEEe
Q psy17133         67 LTITAHD-------------DRHIRFFDNVSGK--------LVHSMV-AHLDAVTSLAVDP-QGLYILS  112 (116)
Q Consensus        67 ~~~~~~~-------------d~~i~~~~~~~~~--------~~~~~~-~~~~~v~~~~~~~-~~~~l~~  112 (116)
                      +.++.+.             .+.|.-++.. ++        ....+. ++ .....++|+| +++.+++
T Consensus       148 Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~  214 (354)
T 3a9g_A          148 LYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVAT  214 (354)
T ss_dssp             EEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEE
T ss_pred             EEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEE
Confidence            7766443             1455555544 22        011111 22 2356899999 6776654

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=92.02  E-value=1.1  Score=26.17  Aligned_cols=68  Identities=1%  Similarity=0.008  Sum_probs=37.5

Q ss_pred             CCcEEEEeeCC----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------CeEEEEECCCC
Q psy17133         16 ESTKMVTAFDN----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------RHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~~----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~   85 (116)
                      ++..++.|+.+    ..+.+||..+++....-.....    ......+.+  ++++++.++.+      ..+.+||+.+.
T Consensus        55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~  128 (306)
T 3ii7_A           55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP----RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTE  128 (306)
T ss_dssp             TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC----CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc----ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence            44666666643    5688899887654322211110    111222222  56666666654      46889998877


Q ss_pred             eEEE
Q psy17133         86 KLVH   89 (116)
Q Consensus        86 ~~~~   89 (116)
                      +-..
T Consensus       129 ~W~~  132 (306)
T 3ii7_A          129 SWHT  132 (306)
T ss_dssp             EEEE
T ss_pred             ceEe
Confidence            6443

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.99  E-value=2.2  Score=29.70  Aligned_cols=37  Identities=22%  Similarity=0.177  Sum_probs=29.8

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID   44 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~   44 (116)
                      +.++...+ +..++++-+.|+++++|++.+++.+....
T Consensus       238 ~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          238 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             EEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             EEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            45566665 66789999999999999999998877654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=91.89  E-value=1.7  Score=28.30  Aligned_cols=66  Identities=15%  Similarity=0.033  Sum_probs=43.3

Q ss_pred             CeEEEEECCCCceeEEEecCCc-CcCC--CCceeEEEEc-CCCC---EEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         27 SACVLFDLETGKPVVRIDSSQF-GVSG--GGGINRVVCH-PTLP---LTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~-~~~~--~~~i~~~~~~-~~~~---~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      +.|..+|..+++.+-.++.... .-..  .....-+... .+|+   .++.++.++.++++|.++|+.+....
T Consensus       291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~  363 (582)
T 1flg_A          291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP  363 (582)
T ss_dssp             SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence            5799999999998877754210 0000  0111222222 4664   67788999999999999999887654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=91.34  E-value=1.6  Score=32.19  Aligned_cols=92  Identities=9%  Similarity=0.080  Sum_probs=57.8

Q ss_pred             EccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEE
Q psy17133         12 FVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLVHS   90 (116)
Q Consensus        12 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~   90 (116)
                      .+| ..+.++.-. ...+.++++++.+.+..+.-.       ..|....|-....+-...  +..|..|++.. ..+.+.
T Consensus        73 MnP-~~~iiALra-g~~lQiFnl~~k~klks~~~~-------e~VvfWkWis~~~l~lVT--~~aVyHW~~~~~s~P~k~  141 (1630)
T 1xi4_A           73 MNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNTVALVT--DNAVYHWSMEGESQPVKM  141 (1630)
T ss_pred             cCC-CcceEEEec-CCeEEEeehHHhhhhcccccC-------CCceEEEecCCCeeEEEc--CCeEEEeccCCCCccHHH
Confidence            456 445554443 678999999887777776654       357777776544332222  46899999963 233333


Q ss_pred             eecc----cccEEEEEECCCCcEEEeee
Q psy17133         91 MVAH----LDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        91 ~~~~----~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +..|    ...|.+-..+++.+|++..|
T Consensus       142 fdR~~~L~~~QIinY~~d~~~kW~~l~g  169 (1630)
T 1xi4_A          142 FDRHSSLAGCQIINYRTDAKQKWLLLTG  169 (1630)
T ss_pred             HhcchhcccCeeEEeeeCCCCCeEEEEe
Confidence            3322    34677777889999887543

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=91.17  E-value=0.65  Score=31.23  Aligned_cols=30  Identities=17%  Similarity=0.167  Sum_probs=26.1

Q ss_pred             CCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         63 PTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        63 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      .+..++++.+.|+.+|+|++.+++++....
T Consensus       229 ~~~~fLftL~~Dh~LRiWsL~t~~lv~t~D  258 (729)
T 3f7f_A          229 FHERYLIVLTQNCHLKIWDLTSFTLIQDYD  258 (729)
T ss_dssp             ETTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             cCCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence            357799999999999999999999877654

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=91.10  E-value=2.2  Score=28.07  Aligned_cols=60  Identities=13%  Similarity=0.164  Sum_probs=39.4

Q ss_pred             CceEEEEccCCCcEEEEeeC------------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFD------------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~------------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      .+-.|.|+| .+.+++.-..            +..+.+.+..+++....+.+..     ...++.++|+||++.|+..
T Consensus       477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~-----gaE~TG~~fspDg~tlfvn  548 (592)
T 3zwu_A          477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEECTTSSEEEEE
T ss_pred             CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCC-----CccCcCeeECCCCCEEEEE
Confidence            346788999 6776655332            1245556666676555555543     4689999999999877654

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=90.55  E-value=1.7  Score=25.83  Aligned_cols=98  Identities=10%  Similarity=0.118  Sum_probs=51.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      +.+..+.+.+ ++..++++ .++.++. ....++.-.... ..      ...+..+.+.+++.+++.+......+-.|-.
T Consensus       122 ~~~~~i~~~~-~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~------~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g  192 (327)
T 2xbg_A          122 GSPRLIKALG-NGSAEMIT-NVGAIYR-TKDSGKNWQALVQEA------IGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG  192 (327)
T ss_dssp             SCEEEEEEEE-TTEEEEEE-TTCCEEE-ESSTTSSEEEEECSC------CCCEEEEEECTTSCEEEEETTSSEEEEECTT
T ss_pred             CCeEEEEEEC-CCCEEEEe-CCccEEE-EcCCCCCCEEeecCC------CcceEEEEEcCCCcEEEEECCCcEEEEeCCC
Confidence            3466777765 44555544 3454432 222343333332 22      3468889999988887776544444444421


Q ss_pred             CCeEEEEe-ecccccEEEEEECCCCcEEEe
Q psy17133         84 SGKLVHSM-VAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        84 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~  112 (116)
                       ++.-..+ ......+..+.+.++++.++.
T Consensus       193 -G~tW~~~~~~~~~~~~~~~~~~~g~~~~~  221 (327)
T 2xbg_A          193 -QTAWEPHNRTTSRRLHNMGFTPDGRLWMI  221 (327)
T ss_dssp             -CSSCEEEECCSSSCEEEEEECTTSCEEEE
T ss_pred             -CCceeECCCCCCCccceeEECCCCCEEEE
Confidence             2211111 223446777888888776554

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=90.34  E-value=1.6  Score=25.27  Aligned_cols=68  Identities=7%  Similarity=-0.002  Sum_probs=36.3

Q ss_pred             CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133         16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~   85 (116)
                      ++..++.|+.+     ..+.+||..+.+....-.....    ......+.  .++++++.++.+     ..+.+||+++.
T Consensus       159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  232 (301)
T 2vpj_A          159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK----RSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTD  232 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc----cccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCC
Confidence            34566666532     4588899876653322111100    11112222  256666666653     56899999877


Q ss_pred             eEEE
Q psy17133         86 KLVH   89 (116)
Q Consensus        86 ~~~~   89 (116)
                      +-..
T Consensus       233 ~W~~  236 (301)
T 2vpj_A          233 SWTT  236 (301)
T ss_dssp             EEEE
T ss_pred             cEEE
Confidence            6543

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=90.31  E-value=2.7  Score=27.71  Aligned_cols=61  Identities=13%  Similarity=0.163  Sum_probs=40.4

Q ss_pred             CCceEEEEccCCCcEEEEeeC------------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFD------------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~------------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      ..+..+.|.+ ++.+.+....            +..+..++..+++....+.+..     ...++.++|+||++.|+..
T Consensus       476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----~aEpnGiafSPD~ktLfV~  548 (592)
T 4a9v_A          476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFSPDQKTLFVG  548 (592)
T ss_dssp             CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEECTTSSEEEEE
T ss_pred             CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-----CccccCCEECCCCCEEEEE
Confidence            4466789998 6776663221            2267777777776555444331     2468999999999977664

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=89.81  E-value=4.2  Score=29.12  Aligned_cols=64  Identities=16%  Similarity=0.306  Sum_probs=37.4

Q ss_pred             CcEEEEee----------CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy17133         17 STKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGK   86 (116)
Q Consensus        17 ~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~   86 (116)
                      ..++++|.          ..|.+++|++..++ +..+.....    .+.+.+++-- +|+++++.  ...+++|++...+
T Consensus       844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~k-L~lv~~~~v----~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~  915 (1158)
T 3ei3_A          844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGK-LQTVAEKEV----KGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEK  915 (1158)
T ss_dssp             CCEEEEEEEECCTTCSSCCCEEEEEEEEETTE-EEEEEEEEE----SSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTS
T ss_pred             CEEEEEEeeecCCCCCCCCceEEEEEEEECCE-EEEEEEEEc----CCcCEEEeee-CCEEEEEc--CCEEEEEECCCCc
Confidence            46777765          24679999886443 222211111    3567777643 46555544  4689999987654


Q ss_pred             EE
Q psy17133         87 LV   88 (116)
Q Consensus        87 ~~   88 (116)
                      .+
T Consensus       916 ~L  917 (1158)
T 3ei3_A          916 EL  917 (1158)
T ss_dssp             CE
T ss_pred             eE
Confidence            33

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=89.72  E-value=3.3  Score=27.81  Aligned_cols=103  Identities=8%  Similarity=-0.001  Sum_probs=60.9

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..|.++...+ ++. +..+.. +-+..++..+++.......... ......+.++...+++.+.+.....| +..++..+
T Consensus       450 ~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~  524 (781)
T 3v9f_A          450 LDVRVFYEDK-NKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNS-QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDM  524 (781)
T ss_dssp             CCEEEEEECT-TSE-EEEEET-TEEEEEESSSSSCCEEECTTTS-SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTC
T ss_pred             CeEEEEEECC-CCC-EEEEEC-CceEEEeCCCCeEEecccCccc-ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCC
Confidence            4577777766 444 444444 5688999876654332221100 00124688898888888666554344 66688776


Q ss_pred             CeEEEEeec---ccccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVA---HLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~  112 (116)
                      ++.......   ....|.++...++|++.++
T Consensus       525 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~  555 (781)
T 3v9f_A          525 QLVRKFNQYEGFCSNTINQIYRSSKGQMWLA  555 (781)
T ss_dssp             CEEEEECTTTTCSCSCEEEEEECTTSCEEEE
T ss_pred             CeEEEccCCCCCCCCeeEEEEECCCCCEEEE
Confidence            654332211   1346788888888886654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=89.55  E-value=2.3  Score=25.71  Aligned_cols=50  Identities=20%  Similarity=0.278  Sum_probs=34.1

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE--Eee---cccccEEEEEECCC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH--SMV---AHLDAVTSLAVDPQ  106 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~---~~~~~v~~~~~~~~  106 (116)
                      .....+++.|+++++++ ...+.|.+++  .++...  .+.   ........++++|+
T Consensus        31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pd   85 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPR   85 (352)
T ss_dssp             SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTT
T ss_pred             CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCC
Confidence            35789999999985555 4568999998  444321  111   12346889999998

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=89.48  E-value=2.2  Score=25.36  Aligned_cols=87  Identities=8%  Similarity=0.021  Sum_probs=48.4

Q ss_pred             EEEccCCCcEEEEee----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEECCC
Q psy17133         10 IDFVRDESTKMVTAF----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDNVS   84 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~~~   84 (116)
                      ..|++ .+++|+...    ....|+..++. +.....+..+      .  +  ..++++++.|+-.+. ...|...++..
T Consensus       109 ~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~------~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g  176 (302)
T 3s25_A          109 IYASL-IGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNH------Y--L--FTCNTSDRYFYYNNPKNGQLYRYDTAS  176 (302)
T ss_dssp             EEEEE-ETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESS------C--C--CCSEEETTEEEEECTTTCCEEEEETTT
T ss_pred             cEEEE-eCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCC------C--c--eEeeEECCEEEEEeCCCceEEEEECCC
Confidence            35667 556666554    34456666665 4334444433      1  1  345677877766554 67788888876


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.....+..   ... ..+.|++.+|+-
T Consensus       177 ~~~~~l~~~---~~~-~~~~P~g~~iy~  200 (302)
T 3s25_A          177 QSEALFYDC---NCY-KPVVLDDTNVYY  200 (302)
T ss_dssp             TEEEEEECS---CEE-EEEEEETTEEEE
T ss_pred             CCEEEEeCC---Ccc-ceeeecCCEEEE
Confidence            654443321   122 234577777664

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=89.37  E-value=2  Score=24.97  Aligned_cols=68  Identities=7%  Similarity=-0.054  Sum_probs=35.4

Q ss_pred             CCcEEEEeeCC------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEEEE
Q psy17133         16 ESTKMVTAFDN------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIRFF   80 (116)
Q Consensus        16 ~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~~~   80 (116)
                      ++..++.|+.+      ..+.+||..+.+....-.....    ......+.  .++++++.++.         -..+.+|
T Consensus       101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~y  174 (306)
T 3ii7_A          101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ----RCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVY  174 (306)
T ss_dssp             TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEE
T ss_pred             CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC----cceeEEEE--ECCEEEEECCCCCCCCcccccceEEEe
Confidence            44666666543      4588899887653322111100    11112222  25566665543         3458899


Q ss_pred             ECCCCeEEE
Q psy17133         81 DNVSGKLVH   89 (116)
Q Consensus        81 ~~~~~~~~~   89 (116)
                      |+.+.+-..
T Consensus       175 d~~~~~W~~  183 (306)
T 3ii7_A          175 DPATETWTE  183 (306)
T ss_dssp             ETTTTEEEE
T ss_pred             CCCCCeEEE
Confidence            988775443

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=89.28  E-value=2.8  Score=26.44  Aligned_cols=53  Identities=13%  Similarity=0.179  Sum_probs=36.4

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEE--Eeec------ccccEEEEEECCC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVH--SMVA------HLDAVTSLAVDPQ  106 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~------~~~~v~~~~~~~~  106 (116)
                      .....+++.|+|+++++-...+.|++++..+++...  .+..      ....+..++|+|+
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd   87 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence            357899999999977776555678888765554432  2221      2346779999995

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=88.44  E-value=1  Score=31.83  Aligned_cols=36  Identities=22%  Similarity=0.205  Sum_probs=28.3

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID   44 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~   44 (116)
                      .++...+ +..++++-+.|+++++|++.+++.+.+..
T Consensus       241 vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D  276 (1139)
T 4fhn_B          241 ISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE  276 (1139)
T ss_dssp             SCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred             EEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence            3444445 56789999999999999999998877654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=88.35  E-value=2.9  Score=25.48  Aligned_cols=53  Identities=15%  Similarity=0.203  Sum_probs=38.5

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--e----ecccccEEEEEECCC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS--M----VAHLDAVTSLAVDPQ  106 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~--~----~~~~~~v~~~~~~~~  106 (116)
                      .....+++.|++.++++--..+.|++++...++....  +    .........++++|+
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd   90 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD   90 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence            4678999999999877776689999998765554221  1    122456789999995

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=88.19  E-value=2.5  Score=24.53  Aligned_cols=68  Identities=12%  Similarity=0.018  Sum_probs=35.6

Q ss_pred             CCcEEEEeeC-------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECC
Q psy17133         16 ESTKMVTAFD-------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNV   83 (116)
Q Consensus        16 ~~~~l~~~~~-------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~   83 (116)
                      ++..++.|+.       ...+.+||..+++....-.....    ......+.  .++++++.++.+     ..+.+||++
T Consensus       155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~  228 (302)
T 2xn4_A          155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR----RSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPT  228 (302)
T ss_dssp             TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred             CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc----cccccEEE--ECCEEEEECCCCCCcccceEEEEeCC
Confidence            3455565543       24588899876653322111100    11122222  256666666653     468899998


Q ss_pred             CCeEEE
Q psy17133         84 SGKLVH   89 (116)
Q Consensus        84 ~~~~~~   89 (116)
                      +.+-..
T Consensus       229 ~~~W~~  234 (302)
T 2xn4_A          229 TNAWRQ  234 (302)
T ss_dssp             TTEEEE
T ss_pred             CCCEee
Confidence            776543

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=88.13  E-value=2.6  Score=24.63  Aligned_cols=67  Identities=9%  Similarity=-0.029  Sum_probs=35.4

Q ss_pred             CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133         16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~   85 (116)
                      ++..++.|+.+     ..+.+||..+.+... +.....   .......+.+  ++++++.++.+     ..+.+||+.+.
T Consensus       168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~  241 (308)
T 1zgk_A          168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRM-ITAMNT---IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE  241 (308)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEE-CCCCSS---CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CCEEEEEeCCCCCCcCceEEEEeCCCCeEee-CCCCCC---ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence            34566666532     458888987654322 211100   0111222222  56666666553     56899998876


Q ss_pred             eEE
Q psy17133         86 KLV   88 (116)
Q Consensus        86 ~~~   88 (116)
                      +-.
T Consensus       242 ~W~  244 (308)
T 1zgk_A          242 TWT  244 (308)
T ss_dssp             EEE
T ss_pred             cEE
Confidence            544

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=88.11  E-value=2.6  Score=24.67  Aligned_cols=68  Identities=9%  Similarity=-0.036  Sum_probs=35.7

Q ss_pred             CCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC-----eEEEEECCC
Q psy17133         16 ESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR-----HIRFFDNVS   84 (116)
Q Consensus        16 ~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~   84 (116)
                      ++..++.|+.      ...+.+||..+.+... +.....   .......+.  -++++++.++.++     .+.+||+.+
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~---~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~  221 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKE-LAPMQT---ARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD  221 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEE-CCCCSS---CCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEE-CCCCCC---chhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC
Confidence            4466666654      2468889988664322 211100   011112222  2566666666543     588899887


Q ss_pred             CeEEE
Q psy17133         85 GKLVH   89 (116)
Q Consensus        85 ~~~~~   89 (116)
                      .+-..
T Consensus       222 ~~W~~  226 (315)
T 4asc_A          222 NKWAP  226 (315)
T ss_dssp             TEEEE
T ss_pred             CeEEE
Confidence            75443

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=87.68  E-value=2.7  Score=24.34  Aligned_cols=68  Identities=9%  Similarity=-0.060  Sum_probs=36.1

Q ss_pred             CCcEEEEeeCC-----CeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEEC
Q psy17133         16 ESTKMVTAFDN-----SACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDN   82 (116)
Q Consensus        16 ~~~~l~~~~~~-----~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~   82 (116)
                      ++..++.|+.+     ..+.+||..+++   ....-.....    ......+.+  ++++++.++.+     ..+.+||+
T Consensus        62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~----r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~  135 (301)
T 2vpj_A           62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR----RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDP  135 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC----CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred             CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC----ccceeEEEE--CCEEEEEcccCCCcccceEEEEcC
Confidence            44666666643     468899988665   3222111100    112222222  56666666543     46889998


Q ss_pred             CCCeEEE
Q psy17133         83 VSGKLVH   89 (116)
Q Consensus        83 ~~~~~~~   89 (116)
                      .+.+-..
T Consensus       136 ~~~~W~~  142 (301)
T 2vpj_A          136 NIDQWSM  142 (301)
T ss_dssp             TTTEEEE
T ss_pred             CCCeEEE
Confidence            8776443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=86.48  E-value=3.4  Score=24.20  Aligned_cols=56  Identities=9%  Similarity=-0.078  Sum_probs=28.6

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-----CeEEEEECCCCeEE
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-----RHIRFFDNVSGKLV   88 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-----~~i~~~~~~~~~~~   88 (116)
                      ..+.+||..+++....-.....    .... ++. ..++++++.++. +     ..+.+||+.+.+-.
T Consensus       117 ~~~~~~d~~~~~W~~~~~~p~~----r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~  178 (315)
T 4asc_A          117 DSVMCYDRLSFKWGESDPLPYV----VYGH-TVL-SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK  178 (315)
T ss_dssp             CCEEEEETTTTEEEECCCCSSC----CBSC-EEE-EETTEEEEECCBCTTSCBCCCEEEEETTTTEEE
T ss_pred             ceEEEECCCCCcEeECCCCCCc----ccce-eEE-EECCEEEEEeCCCCCCcccceEEEEeCCCCeEE
Confidence            4588888876643221111100    1111 222 235566666665 2     46899998876543

>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*

Probab=86.00  E-value=4.5  Score=25.11  Aligned_cols=85  Identities=13%  Similarity=0.071  Sum_probs=56.0

Q ss_pred             CeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEc---CC----CCEEEEEe-CCCeEEEEECCCCeEEEEee----
Q psy17133         27 SACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCH---PT----LPLTITAH-DDRHIRFFDNVSGKLVHSMV----   92 (116)
Q Consensus        27 ~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~---~~----~~~~~~~~-~d~~i~~~~~~~~~~~~~~~----   92 (116)
                      .+|.+||+.+.  +.++.+.-........+.+..+.+.   |+    +.+++... ...-|.++|+.+++..+.+.    
T Consensus       123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~  202 (381)
T 3q6k_A          123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK  202 (381)
T ss_dssp             CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred             ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence            36889999998  8888876543322224567888887   22    23444333 46789999999988766552    


Q ss_pred             cc--------------cccEEEEEECCC----CcEEE
Q psy17133         93 AH--------------LDAVTSLAVDPQ----GLYIL  111 (116)
Q Consensus        93 ~~--------------~~~v~~~~~~~~----~~~l~  111 (116)
                      ..              ...+..|+.+|+    +++|.
T Consensus       203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LY  239 (381)
T 3q6k_A          203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAY  239 (381)
T ss_dssp             CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEE
T ss_pred             cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEE
Confidence            10              136788888987    67665

>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A

Probab=85.29  E-value=3.3  Score=28.08  Aligned_cols=29  Identities=14%  Similarity=0.165  Sum_probs=25.1

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEec
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDS   45 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~   45 (116)
                      ..++++-+.|+++++|++.+++.+....-
T Consensus       231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL  259 (729)
T 3f7f_A          231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDM  259 (729)
T ss_dssp             TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred             CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence            47999999999999999999987776654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=84.91  E-value=5.9  Score=25.52  Aligned_cols=72  Identities=17%  Similarity=0.107  Sum_probs=50.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      -+-++..++ .-..+..-...|.+++||++++..+..-+-.      ...+...+-+....-++....+|.|.-..+..
T Consensus       260 FPvamqvs~-kygviyviTK~G~i~lyDleTgt~i~~nrIs------~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e  331 (494)
T 1bpo_A          260 FPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS------GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE  331 (494)
T ss_dssp             CEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred             ceeEEEecc-cCCEEEEEecCceEEEEecccceeeeeeccc------CCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence            345667776 5567777788999999999999988776655      34566555555555666666777776666544

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=84.83  E-value=2.4  Score=25.81  Aligned_cols=67  Identities=10%  Similarity=0.159  Sum_probs=42.1

Q ss_pred             eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeE---EEE-c----CCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q psy17133         24 FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINR---VVC-H----PTLPLTITAHDDRHIRFFDNVSGKLVHSMV   92 (116)
Q Consensus        24 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~-~----~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~   92 (116)
                      +.+|.++.++..+|.....+......  ...++..   ..+ .    ..+..+++++.++.+...|..+|+.+..+.
T Consensus        64 ~~dG~l~a~~~~~G~~~~~~~~~~lv--~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           64 FGDGNIYYFNAHQGLQKLPLSIRQLV--STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             STTTEEEEEETTTEEEEEEEEHHHHH--TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             CCCCEEEEEECCCCcEEeeeccccce--eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence            57999999998877554444322100  0111111   000 0    134577889999999999999999998876

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=84.82  E-value=4.3  Score=23.83  Aligned_cols=68  Identities=10%  Similarity=0.029  Sum_probs=34.1

Q ss_pred             CCcEEEEeeCC-------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC------CCeEEEEEC
Q psy17133         16 ESTKMVTAFDN-------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD------DRHIRFFDN   82 (116)
Q Consensus        16 ~~~~l~~~~~~-------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------d~~i~~~~~   82 (116)
                      ++..++.|+.+       ..+.+||..+.+....-.....    .... ++. ..++++++.++.      -..+.+||+
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~  182 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK----VYGH-NVI-SHNGMIYCLGGKTDDKKCTNRVFIYNP  182 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC----EESC-EEE-EETTEEEEECCEESSSCBCCCEEEEET
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc----cccc-EEE-EECCEEEEEcCCCCCCCccceEEEEcC
Confidence            33555555532       3477888876543322111100    1111 122 245666666553      245899999


Q ss_pred             CCCeEEE
Q psy17133         83 VSGKLVH   89 (116)
Q Consensus        83 ~~~~~~~   89 (116)
                      .+.+-..
T Consensus       183 ~~~~W~~  189 (318)
T 2woz_A          183 KKGDWKD  189 (318)
T ss_dssp             TTTEEEE
T ss_pred             CCCEEEE
Confidence            8776443

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=83.74  E-value=4.8  Score=23.60  Aligned_cols=67  Identities=7%  Similarity=-0.009  Sum_probs=34.2

Q ss_pred             CCcEEEEeeC------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCC
Q psy17133         16 ESTKMVTAFD------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVS   84 (116)
Q Consensus        16 ~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~   84 (116)
                      ++..++.|+.      ...+.+||..+.+....-.....    ......+.  -++++++.++.+     ..+.+||+.+
T Consensus       158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~  231 (318)
T 2woz_A          158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTP----RSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKT  231 (318)
T ss_dssp             TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred             CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCC----cccceEEE--ECCEEEEEcCcCCCCccceEEEEECCC
Confidence            4456666653      24588999887653322111100    11112222  256666666542     3577889887


Q ss_pred             CeEE
Q psy17133         85 GKLV   88 (116)
Q Consensus        85 ~~~~   88 (116)
                      .+-.
T Consensus       232 ~~W~  235 (318)
T 2woz_A          232 NKWE  235 (318)
T ss_dssp             CCEE
T ss_pred             CeEE
Confidence            6543

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=83.49  E-value=5.7  Score=24.21  Aligned_cols=69  Identities=14%  Similarity=0.132  Sum_probs=43.6

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEE--cC-CCCEEEEE-eCCCeEEEEECCCCeEEEEe
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVC--HP-TLPLTITA-HDDRHIRFFDNVSGKLVHSM   91 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~~~~~~-~~d~~i~~~~~~~~~~~~~~   91 (116)
                      ..+++++.|+.++-+|..+|+.+-.++...     ...+....-  .+ ++..++.. ..||.+..++..+|.....+
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-----~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~   83 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN-----FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL   83 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGG-----SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCc-----cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence            578889999999999999999888886541     011111110  01 22233333 57899988888877554433

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=83.14  E-value=5  Score=23.29  Aligned_cols=68  Identities=10%  Similarity=-0.021  Sum_probs=35.2

Q ss_pred             CCcEEEEeeCC-----CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133         16 ESTKMVTAFDN-----SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~   85 (116)
                      ++..++.|+.+     ..+.+||..+.+....-.....    ......+.  .++++++.++.+     ..+.+||+.+.
T Consensus        61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~  134 (302)
T 2xn4_A           61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR----RSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSN  134 (302)
T ss_dssp             TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC----CBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred             CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc----ccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCC
Confidence            34666666533     3588889876653222111100    11122222  256666666644     35788888876


Q ss_pred             eEEE
Q psy17133         86 KLVH   89 (116)
Q Consensus        86 ~~~~   89 (116)
                      +-..
T Consensus       135 ~W~~  138 (302)
T 2xn4_A          135 EWFH  138 (302)
T ss_dssp             EEEE
T ss_pred             eEee
Confidence            5443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=81.53  E-value=6  Score=23.11  Aligned_cols=67  Identities=7%  Similarity=-0.054  Sum_probs=34.2

Q ss_pred             CCcEEEEeeC-----CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-----CeEEEEECCCC
Q psy17133         16 ESTKMVTAFD-----NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-----RHIRFFDNVSG   85 (116)
Q Consensus        16 ~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~   85 (116)
                      ++..++.|+.     ...+.+||..+.+....-.....    ......+.+  ++++++.++.+     ..+.+||+.+.
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~  194 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR----RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERN  194 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC----CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc----ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence            3455666542     24578888876543221111100    111222222  56666666543     46888998876


Q ss_pred             eEE
Q psy17133         86 KLV   88 (116)
Q Consensus        86 ~~~   88 (116)
                      +-.
T Consensus       195 ~W~  197 (308)
T 1zgk_A          195 EWR  197 (308)
T ss_dssp             EEE
T ss_pred             eEe
Confidence            543

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=80.47  E-value=6.4  Score=22.75  Aligned_cols=96  Identities=9%  Similarity=-0.078  Sum_probs=54.7

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCcee-----EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPV-----VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      .++.|.| ++.+.++  .++.|+.++..+....     ....+...    -..+..+.+.|+|.+.+..  ++.+.-...
T Consensus        91 ~a~~fD~-~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~g----w~~~~~lff~p~G~Lyav~--dg~lyr~~~  161 (236)
T 1tl2_A           91 QFLFFDP-NGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGG----WSGFKFLFFHPNGYLYAVH--GQQFYKALP  161 (236)
T ss_dssp             SEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSS----GGGEEEEEECTTSCEEEEE--TTEEEEECC
T ss_pred             eEEEECC-CCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCC----CCceEEEEECCCceEEEEe--CCcEEecCC
Confidence            5778888 7777776  4689988886432111     11111100    2468999999999877777  666544333


Q ss_pred             CCCe------EEEEee-cccccEEEEEECCCCcEEEe
Q psy17133         83 VSGK------LVHSMV-AHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .++.      ....+. ......+-+.|.+++...+.
T Consensus       162 P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v  198 (236)
T 1tl2_A          162 PVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGV  198 (236)
T ss_dssp             CSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred             CCCCCcccccccceeccCCcceEEEEEECCCCcEEEE
Confidence            3211      111111 22234455678888877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	116
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-11
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-04
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	9e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-05
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-04
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.002
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-05
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	4e-05
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	0.001
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-04
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	6e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.003

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.9 bits (133), Expect = 4e-11
 Identities = 16/113 (14%), Positives = 40/113 (35%), Gaps = 5/113 (4%)

Query: 3   YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH 62
           +     +I F  + +     + D +  +       + +     +        GI  V   
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIIC-----GITSVSFS 279

Query: 63  PTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            +  L +  +DD +   +D +       +  H + V+ L V   G+ + +G++
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.1 bits (105), Expect = 3e-07
 Identities = 9/61 (14%), Positives = 21/61 (34%)

Query: 55  GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
            +  +   P   L ++   D   + +D   G    +   H   + ++   P G    +G+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245

Query: 115 Y 115
            
Sbjct: 246 D 246

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.4 bits (85), Expect = 1e-04
 Identities = 8/81 (9%), Positives = 24/81 (29%), Gaps = 7/81 (8%)

Query: 1   MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV 60
                  TS+ F +     ++  +D+  C ++D         +            ++ + 
Sbjct: 267 DNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALKADRAGVLAGHD------NRVSCLG 319

Query: 61  CHPTLPLTITAHDDRHIRFFD 81
                    T   D  ++ ++
Sbjct: 320 VTDDGMAVATGSWDSFLKIWN 340

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.1 bits (131), Expect = 9e-11
 Identities = 18/110 (16%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 6   TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTL 65
           T +           +++   +    ++D+ TG  ++ +            +  V+ H   
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD------NWVRGVLFHSGG 259

Query: 66  PLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
              ++  DD+ +R +D  + + + ++ AH   VTSL       Y+++G+ 
Sbjct: 260 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.3 bits (90), Expect = 3e-05
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 54  GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQ 106
             + RV+ HP   + ++A +D  I+ +D  +G    ++  H D+V  ++ D  
Sbjct: 18  SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS 70

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.3 bits (82), Expect = 4e-04
 Identities = 8/78 (10%), Positives = 31/78 (39%), Gaps = 7/78 (8%)

Query: 4   NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP 63
           +     + F       +++  D+    ++D +  + +  +++ +        +  +  H 
Sbjct: 247 DNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHE------HFVTSLDFHK 299

Query: 64  TLPLTITAHDDRHIRFFD 81
           T P  +T   D+ ++ ++
Sbjct: 300 TAPYVVTGSVDQTVKVWE 317

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.3 bits (113), Expect = 2e-08
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 5   GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVS------GGGGINR 58
            +  S+ F RD  + +V+   + +  L++L+         +   G            +  
Sbjct: 255 DSVYSVVFTRDGQS-VVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 313

Query: 59  VVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAV------DPQGLYILS 112
           V         ++   DR + F+D  SG  +  +  H ++V S+AV       P+     +
Sbjct: 314 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFAT 373

Query: 113 G 113
           G
Sbjct: 374 G 374

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.0 bits (89), Expect = 3e-05
 Identities = 10/81 (12%), Positives = 30/81 (37%), Gaps = 1/81 (1%)

Query: 1   MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV 60
           + +     S+   +++   +++   +   + +D ++G P++ +   +  V      N   
Sbjct: 305 IGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSS 363

Query: 61  CHPTLPLTITAHDDRHIRFFD 81
             P   +  T   D   R + 
Sbjct: 364 LGPEYNVFATGSGDCKARIWK 384

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 3e-06
 Identities = 7/57 (12%), Positives = 18/57 (31%), Gaps = 1/57 (1%)

Query: 59  VVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
           +         ++   D  +  +    G  +        +V S  +     YI++G+ 
Sbjct: 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSG 326

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (76), Expect = 0.002
 Identities = 6/81 (7%), Positives = 19/81 (23%), Gaps = 8/81 (9%)

Query: 1   MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV 60
             +     S+ F        V+   ++    +    G  + +             +    
Sbjct: 262 HLHESCVLSLKFAYCGKW-FVSTGKDNLLNAWRTPYGASIFQSK-------ESSSVLSCD 313

Query: 61  CHPTLPLTITAHDDRHIRFFD 81
                   +T   D+    ++
Sbjct: 314 ISVDDKYIVTGSGDKKATVYE 334

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (92), Expect = 1e-05
 Identities = 9/63 (14%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 54  GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHS-MVAHLDAVTSLAVDPQGLYILS 112
             ++ +         + +  +     ++  SGKLVH+ ++   D + S+    + L + +
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAA 340

Query: 113 GTY 115
              
Sbjct: 341 VEK 343

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (90), Expect = 3e-05
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 69  ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ 116
           IT  DD+ IR +D+++ K +  +  H   V +L     G+ +   T +
Sbjct: 27  ITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDR 74

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 39.8 bits (91), Expect = 2e-05
 Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 56  INRVVCHPTLPLTITAHDDRHIRFFDNVSGK--LVHSMVAHLDAVTSLAVDPQGLYILSG 113
           I+    +          ++  +  ++    K   VH +  H   VT +   P    I++ 
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTC 69

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 4e-05
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 10/99 (10%)

Query: 20  MVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF 79
           +V+   +S   ++D++TG+ +  +       S                 IT+ DD  ++ 
Sbjct: 230 LVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS-----AVTCLQFNKNFVITSSDDGTVKL 284

Query: 80  FDNVSGKLVHSMVA-----HLDAVTSLAVDPQGLYILSG 113
           +D  +G+ + ++V          V  +      L    G
Sbjct: 285 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 323

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (78), Expect = 0.001
 Identities = 9/37 (24%), Positives = 19/37 (51%)

Query: 69  ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDP 105
           ++  DD  ++ +  V+GK + ++V H   V S  +  
Sbjct: 31  VSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD 67

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 6e-05
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 54  GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAV----TSLAVDPQGLY 109
             +  +  + +     +A  D  +RF+D  + + + ++  H D +      LAVD  G  
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 349

Query: 110 ILSG 113
           +   
Sbjct: 350 LAEP 353

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.9 bits (86), Expect = 1e-04
 Identities = 11/114 (9%), Positives = 29/114 (25%), Gaps = 2/114 (1%)

Query: 1   MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV 60
                          +    V  FD+     ++            +    +    +N + 
Sbjct: 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDD-YNSSKRFAFRCHRLNLKDTNLAYPVNSIE 258

Query: 61  CHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT 114
             P      TA  D  I  ++  + K + +     +  + + +      +   T
Sbjct: 259 FSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLAT 311

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (80), Expect = 6e-04
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 19/122 (15%)

Query: 1   MFYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVV 60
              NG    I  ++     +V+   ++   L+D+E G  +  ++        G       
Sbjct: 172 RTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLE--------GHEELVRC 223

Query: 61  CHPTLPLTITAHDDRHIRFFDNVSG---------KLVHSMVAHLDAVTSLAVDPQGLYIL 111
                   ++   D  I+ +D V+            + ++V H   V  L  D     I+
Sbjct: 224 IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF--QIV 281

Query: 112 SG 113
           S 
Sbjct: 282 SS 283

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.3 bits (79), Expect = 8e-04
 Identities = 7/56 (12%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 61  CHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDPQGLYILSGTY 115
             P      +A  D+ I+ ++  + K+  ++          L +      ++S + 
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 35.3 bits (79), Expect = 8e-04
 Identities = 9/48 (18%), Positives = 11/48 (22%)

Query: 68  TITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY 115
            I   +   +      S         H    T     P G Y  SG  
Sbjct: 31  KIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.8 bits (75), Expect = 0.003
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 1/60 (1%)

Query: 55  GINRVVCHPTLPLTITAHDDRHIRFFD-NVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG 113
                       L  T   D +I  +      K++ ++ AH D V +L  +     + SG
Sbjct: 217 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSG 276

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	116
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.93
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.93
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.92
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.9
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.9
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	99.89
d1tbga_	340	beta1-subunit of the signal-transducing G protein	99.89
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.89
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.89
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.89
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.89
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	99.89
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	99.87
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.85
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	99.85
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.85
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.83
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	99.82
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.82
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.81
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.81
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.8
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.78
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.75
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.72
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.72
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.71
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.69
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.67
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.65
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.64
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.62
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.62
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.61
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.56
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.52
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.52
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.5
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.5
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.48
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.47
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.37
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.35
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.3
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.29
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.26
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.26
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.23
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.0
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.71
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.69
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.68
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.65
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.64
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.6
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.58
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	98.57
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.56
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.49
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.49
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.37
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.33
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.26
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.26
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.24
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.19
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.08
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	97.95
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.91
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	97.87
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.65
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.53
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.05
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	96.86
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	96.75
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.51
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.48
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.33
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.21
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.17
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	96.05
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	95.82
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	95.76
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	95.25
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	94.54
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	93.69
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	93.1
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.87
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	91.12
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	90.93
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	89.91
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	89.9
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	89.53
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	89.12
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	89.02
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	88.93
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	88.91
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	87.61
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	82.56
d2ebsa1	427	Oligoxyloglucan reducing end-specific cellobiohydr	82.19
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	80.02

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=4.3e-24  Score=124.16  Aligned_cols=109  Identities=20%  Similarity=0.356  Sum_probs=98.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |.+.|.+++|+| +++++++++.|+.+++|+....+....+.....    ...+..++|+|+++++++++.|+.|++||+
T Consensus       225 h~~~i~~v~~~p-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~  299 (340)
T d1tbga_         225 HESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHDNI----ICGITSVSFSKSGRLLLAGYDDFNCNVWDA  299 (340)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCTTC----CSCEEEEEECSSSCEEEEEETTSCEEEEET
T ss_pred             CCCCeEEEEECC-CCCEEEEEeCCCeEEEEeecccccccccccccc----cCceEEEEECCCCCEEEEEECCCEEEEEEC
Confidence            678899999999 889999999999999999998887776654422    467999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+.+|...|.+++|+|++++|++++.|
T Consensus       300 ~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~D  333 (340)
T d1tbga_         300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD  333 (340)
T ss_dssp             TTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred             CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccC
Confidence            9999999999999999999999999999999976

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=5.2e-24  Score=127.15  Aligned_cols=112  Identities=24%  Similarity=0.345  Sum_probs=95.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC---eEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR---HIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~---~i~~   79 (116)
                      +...+.+++|+| ++ ++++++.|+.|++||+.+++++..++......+|...|.+++|+|++++|++++.|+   .|++
T Consensus       183 ~~~~~~~v~~s~-dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~l  260 (393)
T d1sq9a_         183 PSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITL  260 (393)
T ss_dssp             SCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEE
T ss_pred             CCCcEEEEEECC-CC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeee
Confidence            445688999999 54 889999999999999999988887765544445578899999999999999999886   5999


Q ss_pred             EECCCCeEEEEee-------------cccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMV-------------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++++.+..+.             +|...|++++|+|++++|+++|.|
T Consensus       261 wd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D  310 (393)
T d1sq9a_         261 YETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD  310 (393)
T ss_dssp             EETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred             cccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCC
Confidence            9999998877764             688899999999999999999987

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.92  E-value=1.9e-23  Score=123.88  Aligned_cols=108  Identities=13%  Similarity=0.167  Sum_probs=94.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCc--eeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGK--PVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      |...+|++++|+| +++++++++.++.|++|+..+++  .+..+.+|      .+.|.+++|+|+++++++++.|+.|++
T Consensus         5 ~~~~pIt~~~~s~-dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH------~~~V~~l~fsp~~~~l~s~s~D~~i~v   77 (371)
T d1k8kc_           5 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH------NGQVTGVDWAPDSNRIVTCGTDRNAYV   77 (371)
T ss_dssp             SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECC------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred             CCCCCeEEEEECC-CCCEEEEEeCCCEEEEEECCCCCEEEEEEecCC------CCCEEEEEECCCCCEEEEEECCCeEEE
Confidence            4568899999999 88999999999999999998765  56677888      678999999999999999999999999


Q ss_pred             EECCCCeEEEE--eecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHS--MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ||+.++.....  +..|...+.+++|+|++++|++++.|
T Consensus        78 Wd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d  116 (371)
T d1k8kc_          78 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS  116 (371)
T ss_dssp             EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             Eeecccccccccccccccccccccccccccccceeeccc
Confidence            99987765443  45677889999999999999998865

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=4.3e-22  Score=115.92  Aligned_cols=109  Identities=19%  Similarity=0.229  Sum_probs=96.1

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+++|+|++...+++++.|+.|++||.++++....+..+      ...+.++.++|+++++++++.|+.+++||
T Consensus       144 ~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~------~~~i~~v~~~p~~~~l~~~~~d~~v~~~d  217 (311)
T d1nr0a1         144 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH------TKFVHSVRYNPDGSLFASTGGDGTIVLYN  217 (311)
T ss_dssp             CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC------SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ccccccccccccccceeeecccccccccccccccccccccccccc------cccccccccCccccccccccccccccccc
Confidence            367889999999944345888999999999999998888888887      67899999999999999999999999999


Q ss_pred             CCCCeEEEEee-------cccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMV-------AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..+++....+.       +|.+.|.+++|+|++++|++++.|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~D  259 (311)
T d1nr0a1         218 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD  259 (311)
T ss_dssp             TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccCCCCCEEEEEeCC
Confidence            99988877664       467789999999999999999876

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=8.9e-22  Score=112.94  Aligned_cols=113  Identities=19%  Similarity=0.249  Sum_probs=100.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc--------------------------------
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV--------------------------------   50 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~--------------------------------   50 (116)
                      |.+.|++++|+| ++++|++++.|+.|++||+.+++.+..+.+|...+                                
T Consensus        16 H~~~I~~l~~sp-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (317)
T d1vyhc1          16 HRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI   94 (317)
T ss_dssp             CSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE
T ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccccccccccccc
Confidence            889999999999 78999999999999999999998888887664421                                


Q ss_pred             ----CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 ----SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ----~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                          .+...+..+.++|++..+++++.|+.+++|++++++.+..+..|...+..++|+|++++|++++.|
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d  164 (317)
T d1vyhc1          95 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND  164 (317)
T ss_dssp             ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCC
Confidence                455667788888999999999999999999999999999999899999999999999999998865

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.89  E-value=1.3e-21  Score=113.94  Aligned_cols=114  Identities=17%  Similarity=0.149  Sum_probs=95.7

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCcee--EEEecCCcCc-----------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPV--VRIDSSQFGV-----------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~~-----------------------------   50 (116)
                      .|.+.|++++|+| ++++|++++.|+.|++||+.+++..  ..+..+....                             
T Consensus        56 ~H~~~v~~~~~sp-~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~  134 (311)
T d1nr0a1          56 EHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD  134 (311)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred             CCCCCEEEEEEeC-CCCeEeccccCceEeeeeeeccccccccccccccCccccccccccccccccccccccccccccccc
Confidence            3778999999999 7899999999999999999866432  2333332211                             


Q ss_pred             ---------CCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         51 ---------SGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        51 ---------~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                               .|...|.+++|+|+++ .+++++.|+.|++||+++++....+..|...|.++.|+|+++++++++.|
T Consensus       135 ~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d  210 (311)
T d1nr0a1         135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD  210 (311)
T ss_dssp             TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccc
Confidence                     5667799999999987 57889999999999999999999998899999999999999999998865

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.89  E-value=4e-21  Score=111.53  Aligned_cols=114  Identities=16%  Similarity=0.194  Sum_probs=85.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCc-------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGV-------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~-------------------------------   50 (116)
                      .|.+.|++++|+| ++++|++|+.|+.|++||..+++.+..+..|...+                               
T Consensus        53 GH~~~I~~l~~s~-~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~  131 (340)
T d1tbga_          53 GHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG  131 (340)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCS
T ss_pred             CCCCCEEEEEECC-CCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccccc
Confidence            4889999999999 88999999999999999999998888887773210                               


Q ss_pred             --------------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133         51 --------------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus        51 --------------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                                                                        .+...+....+.+.+.++++++.|+.+++|
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~  211 (340)
T d1tbga_         132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW  211 (340)
T ss_dssp             CCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             ccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEE
Confidence                                                              112223334444444455555555556666


Q ss_pred             ECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |+++++.+..+..|...|.+++|+|++++|++++.|
T Consensus       212 d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d  247 (340)
T d1tbga_         212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDD  247 (340)
T ss_dssp             ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCC
Confidence            666667777778888999999999999999999875

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=9.7e-22  Score=112.79  Aligned_cols=94  Identities=18%  Similarity=0.343  Sum_probs=88.1

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      +..+++++.++.+++|+..+++.+..+.+|      ...+.+++++|+++++++++.|+.|++||+++++.+..+.+|..
T Consensus       217 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~  290 (317)
T d1vyhc1         217 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGH------DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH  290 (317)
T ss_dssp             CCEEEEEETTSEEEEEETTTTEEEEEEECC------SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS
T ss_pred             CceeEeccCCCEEEEEECCCCcEEEEEeCC------CCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCC
Confidence            356888999999999999999999999988      67899999999999999999999999999999999999999999


Q ss_pred             cEEEEEECCCCcEEEeeecC
Q psy17133         97 AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        97 ~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .|++++|+|++++|++++.|
T Consensus       291 ~V~~~~~s~~~~~l~s~s~D  310 (317)
T d1vyhc1         291 FVTSLDFHKTAPYVVTGSVD  310 (317)
T ss_dssp             CEEEEEECSSSSCEEEEETT
T ss_pred             CEEEEEEcCCCCEEEEEeCC
Confidence            99999999999999999986

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.1e-21  Score=113.66  Aligned_cols=105  Identities=9%  Similarity=0.137  Sum_probs=93.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      +.+.|.+++|+| +++.+++++.++.+++||+.+++.. ....|      ...+.+++|+|+++++++++.|+.|++||+
T Consensus       223 ~~~~i~~l~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~------~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~  294 (337)
T d1gxra_         223 FTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-QLHLH------ESCVLSLKFAYCGKWFVSTGKDNLLNAWRT  294 (337)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-EECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             cccceEEEEEcc-cccccceeccccccccccccccccc-ccccc------ccccceEEECCCCCEEEEEeCCCeEEEEEC
Confidence            567899999999 7899999999999999999877654 44455      568999999999999999999999999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .+++.+..+. |...|.+++|+|++++|++++.|
T Consensus       295 ~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D  327 (337)
T d1gxra_         295 PYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGD  327 (337)
T ss_dssp             TTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETT
T ss_pred             CCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCC
Confidence            9999887765 67889999999999999999876

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1.9e-21  Score=115.03  Aligned_cols=112  Identities=22%  Similarity=0.297  Sum_probs=96.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcC------------cCCCCceeEEEEcCCCCEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFG------------VSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~------------~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      |.+.|++++|+| ++++|++|+ |+.|++|++.+++.+..+..+...            ..+...|.+++|+|+++++++
T Consensus        61 H~~~V~~l~fs~-dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          61 HTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             CSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCcEEEEEECC-CCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            789999999999 789999987 789999999998887776544221            134566999999999999999


Q ss_pred             EeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         71 AHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        71 ~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++.|+.|++|+...++.+....+|...|..+.+++++..+++++.|
T Consensus       139 ~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~  184 (388)
T d1erja_         139 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD  184 (388)
T ss_dssp             EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999999999999999888754

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=7.4e-23  Score=122.13  Aligned_cols=111  Identities=17%  Similarity=0.241  Sum_probs=91.2

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCC---eEEEEECCCCceeEEEecCCc-------CcCCCCceeEEEEcCCCCEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNS---ACVLFDLETGKPVVRIDSSQF-------GVSGGGGINRVVCHPTLPLTITA   71 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~---~v~i~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~~~~~~~   71 (116)
                      .|...|.+++|+| ++++|++++.|+   .+++||+++++.+..+.....       ..+|...|++++|+|++++|+++
T Consensus       229 ~h~~~V~~l~~sp-dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~  307 (393)
T d1sq9a_         229 NNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA  307 (393)
T ss_dssp             CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE
T ss_pred             cccceEEEccccc-ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEE
Confidence            3678899999999 889999998776   589999999988877753211       12457889999999999999999


Q ss_pred             eCCCeEEEEECCCCeEEEEeecccccEE----EEEECCCCcEEEee
Q psy17133         72 HDDRHIRFFDNVSGKLVHSMVAHLDAVT----SLAVDPQGLYILSG  113 (116)
Q Consensus        72 ~~d~~i~~~~~~~~~~~~~~~~~~~~v~----~~~~~~~~~~l~~~  113 (116)
                      +.|+.|++||+++++++..+.+|...|.    .++|+|++..++++
T Consensus       308 s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         308 GWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             CCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEc
Confidence            9999999999999999999998877664    46777777665543

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=8e-22  Score=116.70  Aligned_cols=113  Identities=18%  Similarity=0.239  Sum_probs=88.9

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCc------CcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQF------GVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      |.+.|.++.|+| +++++++++.++.+++||+.+++..........      ...|...+.+++|+|+++++++++.|+.
T Consensus       253 h~~~v~~l~~s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~  331 (388)
T d1erja_         253 HKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG  331 (388)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred             CCCCEEEEEECC-CCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCE
Confidence            567899999999 889999999999999999976543222111100      0122678999999999999999999999


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEE------CCCCcEEEeeecC
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAV------DPQGLYILSGTYQ  116 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~s~d  116 (116)
                      |++||+++++.+..+.+|...|.++++      +|++++|++++.|
T Consensus       332 i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~D  377 (388)
T d1erja_         332 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGD  377 (388)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETT
T ss_pred             EEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCC
Confidence            999999999999999999999998875      6789999999976

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.87  E-value=6.2e-21  Score=113.02  Aligned_cols=107  Identities=17%  Similarity=0.142  Sum_probs=89.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE--ecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI--DSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~   80 (116)
                      |.+.|.+++|+| ++++|++++.|+.+++||+.++.....+  ..+      ...+.+++|+|+++.+++++.|+.+++|
T Consensus        50 H~~~V~~l~fsp-~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~------~~~v~~i~~~p~~~~l~~~s~d~~i~i~  122 (371)
T d1k8kc_          50 HNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI------NRAARCVRWAPNEKKFAVGSGSRVISIC  122 (371)
T ss_dssp             CSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETTEEEEEEECCCC------SSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred             CCCCEEEEEECC-CCCEEEEEECCCeEEEEeecccccccccccccc------cccccccccccccccceeecccCcceee
Confidence            788999999999 8899999999999999999876544443  444      5679999999999999999999999999


Q ss_pred             ECCCCeEE----EEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         81 DNVSGKLV----HSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        81 ~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++......    .....|...|.+++|+|++++|++++.|
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D  162 (371)
T d1k8kc_         123 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD  162 (371)
T ss_dssp             EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             eeecccccccccccccccccccccccccccccceeccccC
Confidence            88654432    2334677889999999999999999875

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.85  E-value=4.1e-20  Score=105.79  Aligned_cols=106  Identities=19%  Similarity=0.231  Sum_probs=88.8

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEE-EecCCcCcCCCCceeEEEEcCC----------CCEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVR-IDSSQFGVSGGGGINRVVCHPT----------LPLTITA   71 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~   71 (116)
                      +.+.+.+++|+| ++.+|++++.++.+++||..+++.... +..|      ...+.+++|+|.          +.+++++
T Consensus       161 ~~~~v~~~~~s~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h------~~~v~~~~~~p~~~~~~~~~~~~~~l~sg  233 (287)
T d1pgua2         161 LRAKPSYISISP-SETYIAAGDVMGKILLYDLQSREVKTSRWAFR------TSKINAISWKPAEKGANEEEIEEDLVATG  233 (287)
T ss_dssp             CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEECCSCCC------SSCEEEEEECCCC------CCSCCEEEEE
T ss_pred             cCCceeEEEecc-Cccccccccccccccceeeccccccccccccc------ccccceeeecccccccccccCCCCeeEee
Confidence            567899999999 889999999999999999988765443 4555      678999999874          4689999


Q ss_pred             eCCCeEEEEECCC-CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         72 HDDRHIRFFDNVS-GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        72 ~~d~~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.|+.|++|++++ ++.+..+.+|...|++++|+|++ .|++++.|
T Consensus       234 s~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D  278 (287)
T d1pgua2         234 SLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGAD  278 (287)
T ss_dssp             ETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETT
T ss_pred             cCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECC
Confidence            9999999999976 55677777899999999999986 47788776

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3e-19  Score=104.48  Aligned_cols=108  Identities=15%  Similarity=0.252  Sum_probs=95.5

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCC--ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETG--KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .|.+.|.+++|+| ++++|++++.|+.|++||+...  +....+..+      ...+..+.++|++..+++++.++.+++
T Consensus        95 ~h~~~I~~v~~s~-dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~d~~i~~  167 (337)
T d1gxra_          95 NRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS------APACYALAISPDSKVCFSCCSDGNIAV  167 (337)
T ss_dssp             CTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECS------SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CCCCcEEEEEEcC-CCCEEEEeecccccccccccccccccccccccc------ccccccccccccccccccccccccccc
Confidence            3677899999999 8899999999999999998754  345566666      567999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      |++.+++.......|...+.+++|+++++.+++++.|
T Consensus       168 ~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d  204 (337)
T d1gxra_         168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD  204 (337)
T ss_dssp             EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccccccccccccccccccccccccccccccccccccc
Confidence            9999999988888889999999999999999998765

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.85  E-value=2.4e-19  Score=103.02  Aligned_cols=114  Identities=11%  Similarity=0.114  Sum_probs=90.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEe-cCCcCc------------------------------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRID-SSQFGV------------------------------   50 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~~------------------------------   50 (116)
                      .|.+.|++++|+| ++++|++++.|+.|++||+.+++.+..+. .|...+                              
T Consensus        10 GH~~~V~~l~~s~-dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~   88 (299)
T d1nr0a2          10 GHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGV   88 (299)
T ss_dssp             CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSS
T ss_pred             CCCCCcEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCccc
Confidence            4889999999999 88999999999999999998877665543 222110                              


Q ss_pred             ---------------------------------------------CCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133         51 ---------------------------------------------SGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus        51 ---------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                                                                   .....+.+++++|+++.+++++.|+.+++||++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~  168 (299)
T d1nr0a2          89 DSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGA  168 (299)
T ss_dssp             CTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                                         12224566788889999999999999999999877


Q ss_pred             eEEEE-eecccccEEEEEECCCCcEEEeeecC
Q psy17133         86 KLVHS-MVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        86 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +.... ...|...|.+++|+|++++|++++.|
T Consensus       169 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d  200 (299)
T d1nr0a2         169 SVSEVKTIVHPAEITSVAFSNNGAFLVATDQS  200 (299)
T ss_dssp             EEEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccccc
Confidence            65443 34578899999999999999998865

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=3.5e-19  Score=103.92  Aligned_cols=111  Identities=15%  Similarity=0.134  Sum_probs=91.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~~~~   81 (116)
                      |...|.++.|+|++...+++++.|+.+++|+....+....+..+..   +...+.+++|+|+ +.++++++.|+.|++||
T Consensus       158 h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd  234 (325)
T d1pgua1         158 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK---QGSFVRDVEFSPDSGEFVITVGSDRKISCFD  234 (325)
T ss_dssp             CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC---TTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred             cccccccccccccccceEEEeecccccccccccccccceecccccC---CCCccEEeeeccccceeccccccccceeeee
Confidence            6788999999995445678899999999999987776666654321   2567999999997 68999999999999999


Q ss_pred             CCCCeEEEEeecccccEEEEEEC---CCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVD---PQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~---~~~~~l~~~s~d  116 (116)
                      +++++.+..+..|...+..+.|+   |++++|++++.|
T Consensus       235 ~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D  272 (325)
T d1pgua1         235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD  272 (325)
T ss_dssp             TTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT
T ss_pred             eccccccccccccccccccceeeeeccCCCEEEEEeCC
Confidence            99999999998887776655555   789999999876

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=5.2e-19  Score=103.19  Aligned_cols=107  Identities=15%  Similarity=0.134  Sum_probs=83.2

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEc---CCCCEEEEEeCCCeEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCH---PTLPLTITAHDDRHIRF   79 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~d~~i~~   79 (116)
                      |.+.|.+++|+|+.+.++++++.|+.|++||..+++.+..+.+|      ...+..+.++   |+++++++++.|+.|++
T Consensus       204 ~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~------~~~v~~~~~s~~~~dg~~l~s~s~D~~i~i  277 (325)
T d1pgua1         204 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDD------QEPVQGGIFALSWLDSQKFATVGADATIRV  277 (325)
T ss_dssp             TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBT------TBCCCSCEEEEEESSSSEEEEEETTSEEEE
T ss_pred             CCCccEEeeeccccceeccccccccceeeeeecccccccccccc------ccccccceeeeeccCCCEEEEEeCCCeEEE
Confidence            46779999999966789999999999999999999999999877      3344433333   67899999999999999


Q ss_pred             EECCCCeEEEEeecccc--cEE--EEEECCCCcEEEeeecC
Q psy17133         80 FDNVSGKLVHSMVAHLD--AVT--SLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~--~v~--~~~~~~~~~~l~~~s~d  116 (116)
                      ||+++++.++.+..+..  .+.  .+.+.++ .+|++++.|
T Consensus       278 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d  317 (325)
T d1pgua1         278 WDVTTSKCVQKWTLDKQQLGNQQVGVVATGN-GRIISLSLD  317 (325)
T ss_dssp             EETTTTEEEEEEECCTTCGGGCEEEEEEEET-TEEEEEETT
T ss_pred             EECCCCCEEEEEEecCCcccCeEEEEEECCC-CEEEEEECC
Confidence            99999999888765443  233  3444444 467788865

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.82  E-value=5e-19  Score=101.65  Aligned_cols=106  Identities=9%  Similarity=0.141  Sum_probs=88.5

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE-EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV-RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ...+.+++|+| +++++++++.++.+++||+.+++... ....|      ...+.+++++|++.++++++.++.+++|++
T Consensus       136 ~~~~~~~~~s~-~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~  208 (299)
T d1nr0a2         136 SYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH------PAEITSVAFSNNGAFLVATDQSRKVIPYSV  208 (299)
T ss_dssp             SSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEEEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEEG
T ss_pred             ccccccccccc-cccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccc
Confidence            34577899999 78999999999999999998765433 23344      568999999999999999999999999999


Q ss_pred             CCCeEEE---EeecccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVH---SMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      .++....   .+..|...|.+++|+|++++|++++.|
T Consensus       209 ~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~d  245 (299)
T d1nr0a2         209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLD  245 (299)
T ss_dssp             GGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cccccccccccccccccccccccccccccceEEEcCC
Confidence            8776553   344678899999999999999999876

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.81  E-value=1.7e-18  Score=101.20  Aligned_cols=105  Identities=13%  Similarity=0.082  Sum_probs=90.0

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCC--CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDN--SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~--~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      .|.+.|.++.|+| +++.|++++.+  ..+++||..+++. ..+..+      ...+..++|+|+++++++++.++.+++
T Consensus        40 ~~~~~v~~~~~sp-Dg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~~~  111 (360)
T d1k32a3          40 PEPLRIRYVRRGG-DTKVAFIHGTREGDFLGIYDYRTGKA-EKFEEN------LGNVFAMGVDRNGKFAVVANDRFEIMT  111 (360)
T ss_dssp             SCCSCEEEEEECS-SSEEEEEEEETTEEEEEEEETTTCCE-EECCCC------CCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             cCCCCEEEEEECC-CCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCC------CceEEeeeecccccccceecccccccc
Confidence            5788999999999 78888776544  3689999987654 456666      578999999999999999999999999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      |+..+++....+..+...+.+++|+|+|++|+.++
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~  146 (360)
T d1k32a3         112 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGF  146 (360)
T ss_dssp             EETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred             ccccccceeeeeecccccccchhhccceeeeeeec
Confidence            99999999888888888899999999999998654

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.5e-18  Score=99.36  Aligned_cols=106  Identities=14%  Similarity=0.275  Sum_probs=84.6

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...+.++.+++   +++++++.++.+++||....+....+..+..   |...+.++.+  ++.++++++.|+.|++||+
T Consensus       216 ~~~~v~~~~~~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~  287 (342)
T d2ovrb2         216 HQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQCLQTLQGPNK---HQSAVTCLQF--NKNFVITSSDDGTVKLWDL  287 (342)
T ss_dssp             CCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECSTTS---CSSCEEEEEE--CSSEEEEEETTSEEEEEET
T ss_pred             cccceeEEecCC---CEEEEEcCCCEEEEEecccccccccccccce---eeeceeeccc--CCCeeEEEcCCCEEEEEEC
Confidence            556677777765   6899999999999999998888777766522   1334455544  5679999999999999999


Q ss_pred             CCCeEEEEee-----cccccEEEEEECCCCcEEEeeecC
Q psy17133         83 VSGKLVHSMV-----AHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        83 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ++++.++.+.     +|...|++++|+|++.++++|+.|
T Consensus       288 ~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~d  326 (342)
T d2ovrb2         288 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN  326 (342)
T ss_dssp             TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred             CCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence            9999988764     456689999999999999998765

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=4.4e-18  Score=98.13  Aligned_cols=62  Identities=13%  Similarity=0.121  Sum_probs=51.7

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ..+++++|+|++.++++++.||.|++||+++++.+..+..+ .....++|+|++++|++++.|
T Consensus       252 ~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sd  313 (342)
T d1yfqa_         252 YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSD  313 (342)
T ss_dssp             CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEEC
T ss_pred             ccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcC
Confidence            35678999999999999999999999999999998887633 345567788899999887654

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=2.2e-17  Score=95.80  Aligned_cols=104  Identities=18%  Similarity=0.282  Sum_probs=85.3

Q ss_pred             CCCCc-eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTP-TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v-~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |...| ++++|   ++++|++|+.|+.|++||+.+++.+..+.+|      ...|.+++|+|+ ..+++++.|+.|++|+
T Consensus        11 H~~~vitc~~~---~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H------~~~V~~l~~s~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2          11 HMTSVITCLQF---EDNYVITGADDKMIRVYDSINKKFLLQLSGH------DGGVWALKYAHG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             CSSSCEEEEEE---ETTEEEEEETTTEEEEEETTTTEEEEEEECC------SSCEEEEEEETT-TEEEEEETTCCEEEEE
T ss_pred             cCCCcEEEEEE---CCCEEEEEeCCCeEEEEECCCCcEEEEEECC------CCCEEEEEEcCC-CEEEEEeccccccccc
Confidence            66665 56655   4589999999999999999999999999998      678999999985 5789999999999999


Q ss_pred             CCCCeEEEEeeccc--ccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVHSMVAHL--DAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      ....+.........  .......+.++++.+++++.|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  117 (355)
T d1nexb2          81 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD  117 (355)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETT
T ss_pred             ccccccccccccccccccccccccccccceeeeecCC
Confidence            99888776655332  344566778899999888765

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=2.7e-17  Score=94.81  Aligned_cols=107  Identities=4%  Similarity=-0.042  Sum_probs=82.1

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEE---ecCCcCcCCCCceeEEEEcCC-CCEEEEEeCCCeEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRI---DSSQFGVSGGGGINRVVCHPT-LPLTITAHDDRHIR   78 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~d~~i~   78 (116)
                      |...|++++|+| ++++|++++.|+.|++||+.++.....+   ..|      ...|.+++|+|+ +.++++++.|+.++
T Consensus        10 h~d~I~~l~fsp-~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h------~~~V~~v~f~~~~~~~l~sg~~d~~v~   82 (342)
T d1yfqa_          10 PKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY------KHPLLCCNFIDNTDLQIYVGTVQGEIL   82 (342)
T ss_dssp             CSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC------SSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred             CCCCEEEEEEeC-CCCEEEEEECCCeEEEEEccCCCcceEEEEecCC------CCCEEEEEEeCCCCCEEEEccccccee
Confidence            678899999999 7899999999999999999765543333   245      678999999987 45899999999999


Q ss_pred             EEECCCCeEEEEeecccc-cEEEEEECCCCcEEEeeecC
Q psy17133         79 FFDNVSGKLVHSMVAHLD-AVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +|++..+........+.. ......+.++...+++++.|
T Consensus        83 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (342)
T d1yfqa_          83 KVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD  121 (342)
T ss_dssp             EECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT
T ss_pred             eeecccccccccccccccccccccccccccccccccccc
Confidence            999988777666554333 33444556677777776653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=2.7e-17  Score=98.92  Aligned_cols=98  Identities=16%  Similarity=0.053  Sum_probs=76.3

Q ss_pred             EEEccCCCc-EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133         10 IDFVRDEST-KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus        10 ~~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~   88 (116)
                      ..+..+..+ ++++.+.+++|++||..+++.+.+++.+       ..+..++|+|||+++++++.|+.+++||+.+++..
T Consensus        24 ~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-------~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~   96 (426)
T d1hzua2          24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-------YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT   96 (426)
T ss_dssp             CCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECC-------SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE
T ss_pred             ccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC-------CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee
Confidence            334442233 4566778999999999999999999877       35889999999999999999999999999988754


Q ss_pred             EE--ee---cccccEEEEEECCCCcEEEeee
Q psy17133         89 HS--MV---AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        89 ~~--~~---~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..  +.   .|.+.+.+++|+|||+++++++
T Consensus        97 ~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~  127 (426)
T d1hzua2          97 KVAEIKIGIEARSVESSKFKGYEDRYTIAGA  127 (426)
T ss_dssp             EEEEEECCSEEEEEEECCSTTCTTTEEEEEE
T ss_pred             EEEEEeCCCCCcceEEeeeecCCCCEEEEee
Confidence            33  22   3455566778889999987654

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=7.2e-17  Score=93.59  Aligned_cols=101  Identities=11%  Similarity=0.132  Sum_probs=77.3

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeE-EEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINR-VVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      |.+.|.++.|++   +++++++.|+.|++||+.+.......  +      ...+.. ..+++++.++++++ |+.|++||
T Consensus       242 h~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~--~------~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd  309 (355)
T d1nexb2         242 HTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSY--H------HTNLSAITTFYVSDNILVSGS-ENQFNIYN  309 (355)
T ss_dssp             CSSCCCEEEECS---SEEEEECTTSEEEEEETTTCCEEEEE--E------CTTCCCCCEEEECSSEEEEEE-TTEEEEEE
T ss_pred             cccccccccccc---ceeeeeecccccccccccccceeccc--c------cCCceEEEEEcCCCCEEEEEe-CCEEEEEE
Confidence            678899998875   68999999999999999877654443  3      223333 34567777777665 89999999


Q ss_pred             CCCCeEEE-EeecccccEEEEEECCCCcEEEeeecC
Q psy17133         82 NVSGKLVH-SMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        82 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                      +++++.+. .+.+|...|.+++|+|+ ..+++++.|
T Consensus       310 ~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~d  344 (355)
T d1nexb2         310 LRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKD  344 (355)
T ss_dssp             TTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESS
T ss_pred             CCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECC
Confidence            99999875 35678889999999987 466777765

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.71  E-value=5.7e-16  Score=90.32  Aligned_cols=107  Identities=20%  Similarity=0.139  Sum_probs=89.6

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe---------
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH---------   72 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------   72 (116)
                      .|.+.+.+++|+| +++++++++.++.+++|+..+++....+..+      ...+.+++|+|++++++.+.         
T Consensus        83 ~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~spdg~~la~~~~~~~~~~~~  155 (360)
T d1k32a3          83 ENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSR------EAMITDFTISDNSRFIAYGFPLKHGETDG  155 (360)
T ss_dssp             CCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECS------SSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred             CCCceEEeeeecc-cccccceeccccccccccccccceeeeeecc------cccccchhhccceeeeeeeccccccceee
Confidence            3678899999999 8899999999999999999999888888777      56788999999999888643         


Q ss_pred             -CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         73 -DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        73 -~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                       .++.+++|++.+++..... .+...+..++|+|+|+.|++++.|
T Consensus       156 ~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~s~~  199 (360)
T d1k32a3         156 YVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDADSKNLYYLSYR  199 (360)
T ss_dssp             CCEEEEEEEETTTTEEEECS-CSSSBEEEEEECTTSCEEEEEESC
T ss_pred             ccccceeeeccccCceeeec-ccccccccccccCCCCEEEEEeCC
Confidence             3456999999988765544 356678889999999999988754

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2e-15  Score=85.41  Aligned_cols=81  Identities=15%  Similarity=0.306  Sum_probs=68.5

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      |...|+|++|   ++++|++|+.|+.|++||+.+++.+..+++|      ...|.++++  +++++++++.|+.+++|++
T Consensus        14 ~~~~V~c~~~---d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H------~~~V~~v~~--~~~~l~s~s~D~~i~~~~~   82 (293)
T d1p22a2          14 TSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGH------TGSVLCLQY--DERVIITGSSDSTVRVWDV   82 (293)
T ss_dssp             SCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCC------SSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred             CCCCEEEEEE---cCCEEEEEeCCCeEEEEECCCCcEEEEEecC------CCCEeeeec--ccceeeccccccccccccc
Confidence            4566777654   5689999999999999999999999999998      678888776  6789999999999999999


Q ss_pred             CCCeEEEEeecc
Q psy17133         83 VSGKLVHSMVAH   94 (116)
Q Consensus        83 ~~~~~~~~~~~~   94 (116)
                      ..+.........
T Consensus        83 ~~~~~~~~~~~~   94 (293)
T d1p22a2          83 NTGEMLNTLIHH   94 (293)
T ss_dssp             SSCCEEEEECCC
T ss_pred             cccccccccccc
Confidence            988777665533

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.67  E-value=1.1e-15  Score=88.69  Aligned_cols=99  Identities=11%  Similarity=0.015  Sum_probs=80.2

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEECCCCeEE
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~~~~   88 (116)
                      ++|++ +++++++++.++.|.+||+.+++.+.+++...     ...+..++|+|||+.++ ++..++.|.+||+.+++.+
T Consensus         2 ~a~~~-~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~-----~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~   75 (346)
T d1jmxb_           2 PALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-----KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT   75 (346)
T ss_dssp             CCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSS-----CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             ccCCC-CCcEEEEEcCCCEEEEEECCCCCEEEEEEcCC-----CCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeee
Confidence            46788 88999999999999999999999988887431     34578999999999774 5567899999999999988


Q ss_pred             EEeeccc------ccEEEEEECCCCcEEEeee
Q psy17133         89 HSMVAHL------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        89 ~~~~~~~------~~v~~~~~~~~~~~l~~~s  114 (116)
                      ..+....      ..+..++|+|||+++++++
T Consensus        76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~  107 (346)
T d1jmxb_          76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATV  107 (346)
T ss_dssp             EEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred             eeecccccccccCCceEEEEEecCCCEEEEEe
Confidence            7765321      2356789999999987664

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=9.4e-15  Score=83.25  Aligned_cols=101  Identities=9%  Similarity=0.119  Sum_probs=77.5

Q ss_pred             EEEccCCCcEEEEeeCC-CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEE
Q psy17133         10 IDFVRDESTKMVTAFDN-SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLV   88 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~   88 (116)
                      ..+++ +++.+++++.+ +.+++|++...+....+...     +...+.+++|+|++.++++++.|+.|++||+.+++..
T Consensus       124 ~~~~~-~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~  197 (287)
T d1pgua2         124 SAVSL-SQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP-----LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK  197 (287)
T ss_dssp             EEEEE-CSSEEEEEETTTSCEEEEETTEEEEEEECSSC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             eeeec-cCcceeeeccccceeeeeeccccceeeeeeec-----cCCceeEEEeccCccccccccccccccceeecccccc
Confidence            44566 45666666554 57999998765555554432     1567999999999999999999999999999988876


Q ss_pred             EE-eecccccEEEEEECCC----------CcEEEeeecC
Q psy17133         89 HS-MVAHLDAVTSLAVDPQ----------GLYILSGTYQ  116 (116)
Q Consensus        89 ~~-~~~~~~~v~~~~~~~~----------~~~l~~~s~d  116 (116)
                      .. +..|...|.+++|+|.          +.+|++++.|
T Consensus       198 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D  236 (287)
T d1pgua2         198 TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD  236 (287)
T ss_dssp             ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred             cccccccccccceeeecccccccccccCCCCeeEeecCC
Confidence            54 5678889999999875          4578888876

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=2.2e-14  Score=82.59  Aligned_cols=88  Identities=16%  Similarity=0.285  Sum_probs=70.9

Q ss_pred             CCCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17133          2 FYNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFD   81 (116)
Q Consensus         2 ~~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~   81 (116)
                      .|.+.|.+ ++++ ++++|++|+.|+.|++||+.+++.+..+.+|      ...|.+++++|+  ++++++.|+.+++|+
T Consensus        14 GH~~~V~s-~~~~-~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h------~~~V~~v~~~~~--~l~s~s~D~~~~~~~   83 (342)
T d2ovrb2          14 GHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH------TGGVWSSQMRDN--IIISGSTDRTLKVWN   83 (342)
T ss_dssp             CSTTSCEE-EEEE-ETTEEEEEETTSCEEEEETTTCCEEEECCCC------SSCEEEEEEETT--EEEEEETTSCEEEEE
T ss_pred             CcCCceEE-EEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEeCC------CCCEEEEEeCCC--ccccceecccccccc
Confidence            37778754 3555 5689999999999999999999999999988      678999999875  899999999999999


Q ss_pred             CCCCeEEEEeecccccEE
Q psy17133         82 NVSGKLVHSMVAHLDAVT   99 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~   99 (116)
                      ............+...+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~  101 (342)
T d2ovrb2          84 AETGECIHTLYGHTSTVR  101 (342)
T ss_dssp             TTTTEEEEEECCCSSCEE
T ss_pred             cccccceecccccceeEe
Confidence            987766555444433333

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.62  E-value=2.9e-15  Score=90.41  Aligned_cols=87  Identities=15%  Similarity=0.025  Sum_probs=70.3

Q ss_pred             EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE--EEEee---c
Q psy17133         19 KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL--VHSMV---A   93 (116)
Q Consensus        19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~---~   93 (116)
                      ++++.+.+++|.+||..+++.+..+..+       ..+..++|+|||+++++++.|+.+++||+.+++.  ...+.   .
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-------~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~  106 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE  106 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-------CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC
Confidence            3578889999999999999999999876       2589999999999999999999999999987653  23332   3


Q ss_pred             ccccEEEEEECCCCcEEEe
Q psy17133         94 HLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        94 ~~~~v~~~~~~~~~~~l~~  112 (116)
                      +.+.+.+..|+|||++|++
T Consensus       107 ~~~~~~s~~~SpDG~~l~v  125 (432)
T d1qksa2         107 ARSIETSKMEGWEDKYAIA  125 (432)
T ss_dssp             EEEEEECCSTTCTTTEEEE
T ss_pred             CCCeEEecccCCCCCEEEE
Confidence            4445566677889998754

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.62  E-value=2.2e-14  Score=82.79  Aligned_cols=93  Identities=14%  Similarity=0.098  Sum_probs=75.9

Q ss_pred             cEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeeccc-
Q psy17133         18 TKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSGKLVHSMVAHL-   95 (116)
Q Consensus        18 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~~~-   95 (116)
                      +++++++.+++|++||+.+++.+..++.+..    ...+..++++|||+++ ++++.++.|.+||+.+++.+..+..+. 
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~----~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~   77 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADA----GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTC----TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCC----CCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCC
Confidence            6899999999999999999999988876532    3457899999999977 456779999999999999988776432 


Q ss_pred             ----ccEEEEEECCCCcEEEeee
Q psy17133         96 ----DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        96 ----~~v~~~~~~~~~~~l~~~s  114 (116)
                          ..+..++|+|+++++++++
T Consensus        78 ~~~~~~~~~v~~s~dg~~l~~~~  100 (337)
T d1pbyb_          78 EERVKSLFGAALSPDGKTLAIYE  100 (337)
T ss_dssp             TEEEECTTCEEECTTSSEEEEEE
T ss_pred             cccccceeeEEEcCCCcEEEEee
Confidence                2345789999999988765

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.3e-14  Score=81.94  Aligned_cols=99  Identities=16%  Similarity=0.226  Sum_probs=78.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+..+.++   +..+++++.|+.+++||+.+.+.+..+.++      ...+.  .+.+++..+++++.|+.|++||+..
T Consensus       179 ~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~  247 (293)
T d1p22a2         179 RGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGH------EELVR--CIRFDNKRIVSGAYDGKIKVWDLVA  247 (293)
T ss_dssp             SCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCC------SSCEE--EEECCSSEEEEEETTSCEEEEEHHH
T ss_pred             cccccccCC---CCeEEEecCCCEEEEEecccceeeeeeccc------ceeee--eccccceEEEEEcCCCEEEEEECCC
Confidence            344555554   378999999999999999999888888777      34454  3567788999999999999999643


Q ss_pred             ---------CeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         85 ---------GKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        85 ---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                               ...+..+.+|.+.|.+++|+  +++|+++|.|
T Consensus       248 ~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~D  286 (293)
T d1p22a2         248 ALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHD  286 (293)
T ss_dssp             HTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSS
T ss_pred             CccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecC
Confidence                     34677788899999999985  5689999876

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.56  E-value=5.9e-14  Score=84.68  Aligned_cols=105  Identities=8%  Similarity=-0.094  Sum_probs=78.1

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCce--eEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKP--VVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~   81 (116)
                      ..+..+.|+| +++++++++.++.+++||+.+++.  +.+++....   +.+.+.+..|+|||+++ +++..++.+++||
T Consensus        62 ~~~~~v~fSp-DG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~---~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d  137 (432)
T d1qksa2          62 YAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE---ARSIETSKMEGWEDKYAIAGAYWPPQYVIMD  137 (432)
T ss_dssp             SCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE---EEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             CCeeEEEECC-CCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCC---CCCeEEecccCCCCCEEEEEcCCCCeEEEEe
Confidence            3588999999 889999999999999999987653  344443210   12345556678899975 6788899999999


Q ss_pred             CCCCeEEEEeecc-----------cccEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~  113 (116)
                      ..+++.+..+..+           ......+.++|+++.++.+
T Consensus       138 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs  180 (432)
T d1qksa2         138 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN  180 (432)
T ss_dssp             TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             CccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEE
Confidence            9999988776532           3455678889998877544

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.52  E-value=1.2e-12  Score=74.47  Aligned_cols=86  Identities=13%  Similarity=0.226  Sum_probs=71.5

Q ss_pred             EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecccccEE
Q psy17133         21 VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLT-ITAHDDRHIRFFDNVSGKLVHSMVAHLDAVT   99 (116)
Q Consensus        21 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~   99 (116)
                      ++++.++.|.+||+++++.+.+++..       ..+..++++|+|+++ +++..++.|.+||+.+++.+..+..+. .+.
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g-------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~   77 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVG-------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ   77 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECC-------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccc
Confidence            45567899999999999998888765       357899999999977 466678999999999999998887554 468


Q ss_pred             EEEECCCCcEEEeee
Q psy17133        100 SLAVDPQGLYILSGT  114 (116)
Q Consensus       100 ~~~~~~~~~~l~~~s  114 (116)
                      .+.|+++++.++..+
T Consensus        78 ~~~~~~~~~~~~~~~   92 (301)
T d1l0qa2          78 GVAVSPDGKQVYVTN   92 (301)
T ss_dssp             EEEECTTSSEEEEEE
T ss_pred             ccccccccccccccc
Confidence            899999999876654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.52  E-value=1e-12  Score=75.71  Aligned_cols=109  Identities=17%  Similarity=0.087  Sum_probs=83.9

Q ss_pred             CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-----------
Q psy17133          5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-----------   72 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----------   72 (116)
                      ..+.+++|+| +++++ ++++.++.|.+||+.+++.+..+..+... .+...+..+.++|+++.++.+.           
T Consensus        34 ~~~~~i~~sp-Dg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~-~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~  111 (337)
T d1pbyb_          34 PTPMVPMVAP-GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE-ERVKSLFGAALSPDGKTLAIYESPVRLELTHFE  111 (337)
T ss_dssp             TCCCCEEECT-TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT-EEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred             CCccEEEECC-CCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCc-ccccceeeEEEcCCCcEEEEeecCCcceeeecc
Confidence            4578999999 77766 56677899999999999988887765220 0012345789999999887765           


Q ss_pred             -CCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeecC
Q psy17133         73 -DDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTYQ  116 (116)
Q Consensus        73 -~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d  116 (116)
                       .+..+.+||..+++.+..+.. ...+..++|+|+++++++++.|
T Consensus       112 ~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~  155 (337)
T d1pbyb_         112 VQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD  155 (337)
T ss_dssp             ECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS
T ss_pred             ccccceeeccccCCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC
Confidence             357899999999998888774 4457889999999999887653

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.50  E-value=4.8e-12  Score=71.95  Aligned_cols=101  Identities=15%  Similarity=0.223  Sum_probs=81.7

Q ss_pred             CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~~   82 (116)
                      +.+..++|+| +++++ +++..++.|++||+.+++.+..+..+       ..+..+.+++++..++ ++..+..+.+|+.
T Consensus        32 ~~p~~va~sp-dG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (301)
T d1l0qa2          32 SNPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAG-------SSPQGVAVSPDGKQVYVTNMASSTLSVIDT  103 (301)
T ss_dssp             SSEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-------SSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             CCceEEEEeC-CCCEEEEEECCCCEEEEEECCCCceeeeeecc-------ccccccccccccccccccccccceeeeccc
Confidence            4578899999 77766 56667899999999999999888876       3578999999988554 5566789999999


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+++....+..+ .....+.|+|+++.++..+
T Consensus       104 ~~~~~~~~~~~~-~~~~~~~~~~dg~~~~~~~  134 (301)
T d1l0qa2         104 TSNTVAGTVKTG-KSPLGLALSPDGKKLYVTN  134 (301)
T ss_dssp             TTTEEEEEEECS-SSEEEEEECTTSSEEEEEE
T ss_pred             ccceeeeecccc-ccceEEEeecCCCeeeeee
Confidence            999888877644 4578899999999876544

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.50  E-value=6.7e-14  Score=84.03  Aligned_cols=105  Identities=9%  Similarity=-0.037  Sum_probs=76.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeE--EEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVV--RIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~~~   81 (116)
                      ..+..++|+| +|+++++++.|+.+++||+.+++...  +++...   .+.+.+.++.|+|||+.+++ +..++.+.+||
T Consensus        62 ~~~~~vafSP-DGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~---~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d  137 (426)
T d1hzua2          62 YAVHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI---EARSVESSKFKGYEDRYTIAGAYWPPQFAIMD  137 (426)
T ss_dssp             SSEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS---EEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred             CCeeEEEECC-CCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC---CCcceEEeeeecCCCCEEEEeecCCCeEEEEc
Confidence            4688999999 88999999999999999999887543  333221   11344566777899997654 55789999999


Q ss_pred             CCCCeEEEEeecc-----------cccEEEEEECCCCcEEEee
Q psy17133         82 NVSGKLVHSMVAH-----------LDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        82 ~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~  113 (116)
                      ..+++.......+           ......+.+++++..++..
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~  180 (426)
T d1hzua2         138 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN  180 (426)
T ss_dssp             TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred             CCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEe
Confidence            9998887766533           2334566777777766544

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=9.8e-13  Score=75.86  Aligned_cols=91  Identities=12%  Similarity=0.220  Sum_probs=64.5

Q ss_pred             EEEEeeCCCeEEEEECCCCceeEEEe--cCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEECCCCeEEEE---ee
Q psy17133         19 KMVTAFDNSACVLFDLETGKPVVRID--SSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFDNVSGKLVHS---MV   92 (116)
Q Consensus        19 ~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~---~~   92 (116)
                      .+++++.+++|++|++.....+..+.  .+      .+.+..++|+|||++|++++ .++.|.+|++........   ..
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~------~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~   79 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES   79 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcC------CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec
Confidence            44667789999999987544333332  33      46789999999999886554 589999999875432211   11


Q ss_pred             cccccEEEEEECCCCcEEEeeec
Q psy17133         93 AHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        93 ~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      .....+..++|+|||++|++++.
T Consensus        80 ~~~~~p~~l~~spDg~~l~v~~~  102 (333)
T d1ri6a_          80 ALPGSLTHISTDHQGQFVFVGSY  102 (333)
T ss_dssp             ECSSCCSEEEECTTSSEEEEEET
T ss_pred             ccCCCceEEEEcCCCCEEeeccc
Confidence            23345778999999999988764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.47  E-value=1.6e-12  Score=75.01  Aligned_cols=109  Identities=8%  Similarity=0.090  Sum_probs=77.8

Q ss_pred             CCCCceEEEEccCCCcEEEEe-eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTA-FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFF   80 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~   80 (116)
                      +.+.+..++|+| ++++|+++ ..++.|++|++........+..+..   ....+..++++|||+++++++. ++.+.+|
T Consensus        35 ~~~~v~~la~sp-DG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~---~~~~p~~l~~spDg~~l~v~~~~~~~v~~~  110 (333)
T d1ri6a_          35 VPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA---LPGSLTHISTDHQGQFVFVGSYNAGNVSVT  110 (333)
T ss_dssp             CSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE---CSSCCSEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CCCCEeEEEEeC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc---cCCCceEEEEcCCCCEEeecccCCCceeee
Confidence            567899999999 78877554 4689999999876543333322111   0245778999999998888774 7789999


Q ss_pred             ECCCCeEEEEe--ecccccEEEEEECCCCcEEEeeec
Q psy17133         81 DNVSGKLVHSM--VAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        81 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +..........  ..+...+..+.++|++++++.++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~  147 (333)
T d1ri6a_         111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPAL  147 (333)
T ss_dssp             EEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEG
T ss_pred             ccccccceecccccCCCccceEEEeeecceeeecccc
Confidence            88766554333  345556788899999998887653

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.37  E-value=2.3e-11  Score=71.22  Aligned_cols=103  Identities=11%  Similarity=-0.007  Sum_probs=77.1

Q ss_pred             CCCCceEEEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-----
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-----   72 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----   72 (116)
                      +.+++..++++| +++.+++..     ....+.+||..+++.+..+..+        ....+.|+|||+.+++++     
T Consensus        19 ~~~p~~~~a~sp-dg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~--------~~~~~a~SpDG~~l~va~~~~~~   89 (373)
T d2madh_          19 ADGPTNDEAPGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG--------FLPNPVAAHSGSEFALASTSFSR   89 (373)
T ss_pred             CCCCccccccCC-CCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCC--------CCccEEEcCCCCEEEEEeecCCc
Confidence            467788999999 677766542     3457999999999999888766        233789999999988764     


Q ss_pred             -----CCCeEEEEECCCCeEEEEeeccccc-------EEEEEECCCCcEEEeee
Q psy17133         73 -----DDRHIRFFDNVSGKLVHSMVAHLDA-------VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        73 -----~d~~i~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~s  114 (116)
                           .++.|.+||..+++.+..+..+...       ...+.|+++++.++...
T Consensus        90 ~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~  143 (373)
T d2madh_          90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQ  143 (373)
T ss_pred             ccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEE
Confidence                 3578999999999988776544332       24578888888765543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.35  E-value=3.7e-12  Score=77.09  Aligned_cols=103  Identities=9%  Similarity=0.121  Sum_probs=77.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD   74 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d   74 (116)
                      ...|.+..|+| ++++|+.++.         .+.+.+||+.+++ +..+..+      ...+..+.|+|||+.++... +
T Consensus        61 ~~~i~~~~~Sp-Dg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~-~~~l~~~------~~~~~~~~~SPDG~~ia~~~-~  131 (470)
T d2bgra1          61 GHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LITEERI------PNNTQWVTWSPVGHKLAYVW-N  131 (470)
T ss_dssp             SSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-ECCSSCC------CTTEEEEEECSSTTCEEEEE-T
T ss_pred             cCccceeEECC-CCCEEEEEECCcceeeeccCceEEEEECCCCc-ccccccC------CccccccccccCcceeeEee-c
Confidence            45689999999 7888887653         4678899999775 4455555      56789999999999998864 6


Q ss_pred             CeEEEEECCCCeEEEEeecc------------------cccEEEEEECCCCcEEEeeec
Q psy17133         75 RHIRFFDNVSGKLVHSMVAH------------------LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+.+|+..+++..+.....                  .+....+.|+|||+.|+....
T Consensus       132 ~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~  190 (470)
T d2bgra1         132 NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF  190 (470)
T ss_dssp             TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred             ccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEe
Confidence            78999999888766543211                  123456789999999998654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.30  E-value=4.8e-11  Score=68.81  Aligned_cols=83  Identities=7%  Similarity=-0.089  Sum_probs=66.4

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNV   83 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~   83 (116)
                      ...+..+.+++ ++..++... .+.+.+||..+++.+..+...       ..+.+++|+|||+.+++++.++.|++||.+
T Consensus       251 ~~~~~~~~~~~-~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~-------~~~~~va~s~DG~~l~v~~~d~~v~v~D~~  321 (346)
T d1jmxb_         251 TELYFTGLRSP-KDPNQIYGV-LNRLAKYDLKQRKLIKAANLD-------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPD  321 (346)
T ss_dssp             SSCEEEEEECS-SCTTEEEEE-ESEEEEEETTTTEEEEEEECS-------SCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred             cceeEEEEEeC-CCCEEEEec-CCeEEEEECCCCcEEEEEcCC-------CCEEEEEEcCCCCEEEEEeCCCcEEEEECc
Confidence            44566777888 445555444 457999999999888877644       358899999999999999999999999999


Q ss_pred             CCeEEEEeeccc
Q psy17133         84 SGKLVHSMVAHL   95 (116)
Q Consensus        84 ~~~~~~~~~~~~   95 (116)
                      +++.+..+....
T Consensus       322 t~~~i~~i~~p~  333 (346)
T d1jmxb_         322 TLEKVKNIKLPG  333 (346)
T ss_dssp             TTEEEEEEECSS
T ss_pred             cCCEEEEEECCC
Confidence            999998887443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.29  E-value=3.9e-11  Score=72.59  Aligned_cols=102  Identities=15%  Similarity=0.183  Sum_probs=77.0

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIR   78 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~   78 (116)
                      ..+.|.+ +++++..  .++.+.+||..+++....+..+.- ..+...+.++.|+||++.|+..++         ++.+.
T Consensus        20 ~~~~W~~-d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~   95 (470)
T d2bgra1          20 YSLRWIS-DHEYLYK--QENNILVFNAEYGNSSVFLENSTF-DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (470)
T ss_dssp             CCCEECS-SSEEEEE--SSSCEEEEETTTCCEEEEECTTTT-TTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             cCCEeCC-CCEEEEE--cCCcEEEEECCCCCEEEEEchhhh-hhccCccceeEECCCCCEEEEEECCcceeeeccCceEE
Confidence            4678988 6676653  467899999999987666654311 122456899999999999887754         46789


Q ss_pred             EEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         79 FFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +||+++++. ..+..+...+..+.|+|||+.++...
T Consensus        96 l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~  130 (470)
T d2bgra1          96 IYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVW  130 (470)
T ss_dssp             EEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred             EEECCCCcc-cccccCCccccccccccCcceeeEee
Confidence            999998875 44666778899999999999998754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.26  E-value=4.5e-11  Score=69.44  Aligned_cols=96  Identities=14%  Similarity=0.052  Sum_probs=71.4

Q ss_pred             EEEccCCCcEEEEee-----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe----------CC
Q psy17133         10 IDFVRDESTKMVTAF-----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH----------DD   74 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~d   74 (116)
                      .+.+| ++..+++..     ....+.+||..+++.+..+...        ....++|+|||+.++..+          .+
T Consensus         7 ~a~sp-dg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g--------~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d   77 (355)
T d2bbkh_           7 EAPAP-DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--------FLPNPVVADDGSFIAHASTVFSRIARGERT   77 (355)
T ss_dssp             CCCCC-CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--------SSCEEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred             EeeCC-CCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECC--------CCCceEEcCCCCEEEEEeCCCccccccCCC
Confidence            35578 677776543     3557999999999998888765        234789999999777643          46


Q ss_pred             CeEEEEECCCCeEEEEeeccc-------ccEEEEEECCCCcEEEeee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.|++||..+++.+..+..+.       .....++|+|++++++.++
T Consensus        78 ~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~  124 (355)
T d2bbkh_          78 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ  124 (355)
T ss_dssp             EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEE
T ss_pred             CEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEec
Confidence            889999999999887765322       1235678999999887654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.26  E-value=7.7e-11  Score=68.46  Aligned_cols=92  Identities=14%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             ceEEEEccCCCcEEEEeeCC----------CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCC
Q psy17133          7 PTSIDFVRDESTKMVTAFDN----------SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDD   74 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~----------~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d   74 (116)
                      ...+.+++ ++..++....+          ..+.+||..+++.+..+...       ..+.+++|+|||+  +++++..+
T Consensus       251 ~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~-------~~~~~~a~spDG~~~l~v~~~~d  322 (355)
T d2bbkh_         251 WQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-------HEIDSINVSQDEKPLLYALSTGD  322 (355)
T ss_dssp             SSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------EEECEEEECCSSSCEEEEEETTT
T ss_pred             eEEEEEeC-CCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC-------CCEEEEEEcCCCCeEEEEEECCC
Confidence            34577888 66666554322          46999999999988887654       3578999999987  45667779


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECCC
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQ  106 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  106 (116)
                      +.|.+||.++++.++.+..+......+.+.++
T Consensus       323 ~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         323 KTLYIHDAESGEELRSVNQLGHGPQVITTADM  354 (355)
T ss_dssp             TEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred             CEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence            99999999999999988765555555555444

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.23  E-value=6.1e-10  Score=65.10  Aligned_cols=81  Identities=11%  Similarity=0.041  Sum_probs=64.2

Q ss_pred             EEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCCeEEEEECCCCeEEEEeecccc
Q psy17133         19 KMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDRHIRFFDNVSGKLVHSMVAHLD   96 (116)
Q Consensus        19 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~   96 (116)
                      .++....++.+.+||..+++.+..+...       ..+..++|+|||+  ++++++.|+.|++||+.+++.++.+..+..
T Consensus       290 ~~~~~~~~~~v~~~d~~t~~~~~~~~~~-------~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~  362 (373)
T d2madh_         290 AWKLHAAAKEVTSVTGLVGQTSSQISLG-------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGS  362 (373)
T ss_pred             eEEeecCCCeEEEEECCCCcEEEEecCC-------CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCC
Confidence            3344555678999999999888877644       4688999999998  446788899999999999999999987766


Q ss_pred             cEEEEEECCC
Q psy17133         97 AVTSLAVDPQ  106 (116)
Q Consensus        97 ~v~~~~~~~~  106 (116)
                      ..+.+++.++
T Consensus       363 ~P~~l~~~~~  372 (373)
T d2madh_         363 GPQVLSVMNE  372 (373)
T ss_pred             CCcEEEEecC
Confidence            6777766543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.00  E-value=3.7e-09  Score=62.01  Aligned_cols=106  Identities=10%  Similarity=-0.078  Sum_probs=73.7

Q ss_pred             ceEEEEccCCCcEEEEee----------CCCeEEEEECCCCceeEEEecCCcCc-CCCCceeEEEEcCCCCEEEEEe-CC
Q psy17133          7 PTSIDFVRDESTKMVTAF----------DNSACVLFDLETGKPVVRIDSSQFGV-SGGGGINRVVCHPTLPLTITAH-DD   74 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~-~d   74 (116)
                      ...+.|+| +++.+++.+          .++.|.+||..+++.+..+..+.... ........++|+|||++++.+. .+
T Consensus        67 ~~~~a~sp-Dg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~  145 (368)
T d1mdah_          67 LSLAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS  145 (368)
T ss_dssp             TCEEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred             CCcceECC-CCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCC
Confidence            34688999 778777643          35679999999999888876542110 0012235689999999887765 57


Q ss_pred             CeEEEEECCCCeEEEEeeccc-------ccEEEEEECCCCcEEEee
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHL-------DAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~  113 (116)
                      +.+.+||+.+++....+..+.       .....+.+++|++.++..
T Consensus       146 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~  191 (368)
T d1mdah_         146 SAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASD  191 (368)
T ss_dssp             SCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEE
T ss_pred             CeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEE
Confidence            999999999999888765332       223446677888766543

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.71  E-value=1.1e-07  Score=55.58  Aligned_cols=87  Identities=9%  Similarity=0.088  Sum_probs=61.6

Q ss_pred             eEEEEccCCCcEEEEee-C--------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-E-EEEEeCCCe
Q psy17133          8 TSIDFVRDESTKMVTAF-D--------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-L-TITAHDDRH   76 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~-~--------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~~d~~   76 (116)
                      ..+.+++ ++..++... .        ...+.+||..+++.+..+...       ..+..++|+||++ + +++...++.
T Consensus       267 ~~~a~~~-~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~-------~~~~~~a~spDG~~~ly~s~~~~~~  338 (368)
T d1mdah_         267 QMVAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-------HDSDAIIAAQDGASDNYANSAGTEV  338 (368)
T ss_dssp             SCEEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-------EEECEEEECCSSSCEEEEEETTTTE
T ss_pred             eeEEEcC-CCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC-------CceeEEEECCCCCEEEEEEeCCCCe
Confidence            4567788 555554432 1        135889999999888777644       4588999999986 3 456677899


Q ss_pred             EEEEECCCCeEEEEeecccccEEEEEE
Q psy17133         77 IRFFDNVSGKLVHSMVAHLDAVTSLAV  103 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~~~~~~v~~~~~  103 (116)
                      |.+||..+++.+..+..... ...+.+
T Consensus       339 v~v~D~~tgk~~~~i~~g~~-P~~l~~  364 (368)
T d1mdah_         339 LDIYDAASDQDQSSVELDKG-PESLSV  364 (368)
T ss_dssp             EEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred             EEEEECCCCCEEEEEECCCC-CCEEEE
Confidence            99999999999988864322 344443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.3e-07  Score=55.63  Aligned_cols=103  Identities=10%  Similarity=0.106  Sum_probs=68.9

Q ss_pred             CceEEEEccCCCcEEEEeeC---------CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCe
Q psy17133          6 TPTSIDFVRDESTKMVTAFD---------NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRH   76 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~   76 (116)
                      .+....|+| ++++++...+         .+.+.++|+.+++..........    ...+....|+|||+.++... ++.
T Consensus        62 ~~~~~~~Sp-D~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~----~~~l~~~~wSPDG~~iafv~-~~n  135 (465)
T d1xfda1          62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS----NAKLQYAGWGPKGQQLIFIF-ENN  135 (465)
T ss_dssp             TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC----SCCCSBCCBCSSTTCEEEEE-TTE
T ss_pred             ccceeEECC-CCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCC----ccccceeeeccCCceEEEEe-cce
Confidence            466778999 7777766532         46788999987764332222211    34566788999999888765 667


Q ss_pred             EEEEECCCCeEEEEee-ccccc-----------------EEEEEECCCCcEEEeee
Q psy17133         77 IRFFDNVSGKLVHSMV-AHLDA-----------------VTSLAVDPQGLYILSGT  114 (116)
Q Consensus        77 i~~~~~~~~~~~~~~~-~~~~~-----------------v~~~~~~~~~~~l~~~s  114 (116)
                      |.+.+..++...+... +....                 -..+-|||||++|+...
T Consensus       136 l~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~  191 (465)
T d1xfda1         136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA  191 (465)
T ss_dssp             EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred             EEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence            8888887766555443 11111                 24677999999998754

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.68  E-value=7.9e-07  Score=53.61  Aligned_cols=102  Identities=11%  Similarity=0.028  Sum_probs=72.2

Q ss_pred             ceEEEEccCCCcEEEEe-eCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC--EEEEEeCCC--------
Q psy17133          7 PTSIDFVRDESTKMVTA-FDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP--LTITAHDDR--------   75 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~d~--------   75 (116)
                      .......| +|++|++. ..+.+|.++|+.+++....++...     ...+..++++|+++  +++..+.+.        
T Consensus        74 ~s~t~gtp-DGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~-----g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~  147 (441)
T d1qnia2          74 ISMTDGRY-DGKYLFINDKANTRVARIRLDIMKTDKITHIPN-----VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGT  147 (441)
T ss_dssp             EEEETTEE-EEEEEEEEETTTTEEEEEETTTTEEEEEEECTT-----CCCEEEEEECCSSBCCEEEEEECSCEESSCSSS
T ss_pred             cceecccC-CCCEEEEEcCCCCEEEEEECCCCcEeeEEecCC-----CCCccceEEeccCCEEEEEeccCCcccccCccc
Confidence            33444568 67877655 468899999999998877665331     34689999999988  444443321        


Q ss_pred             ---------eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         76 ---------HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        76 ---------~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                               .+..+|..+.+...++.. .+.+..+.|+|+|+++++++.
T Consensus       148 ~~~~~~~~~~~~~iD~~t~~v~~qI~v-~~~p~~v~~spdGk~a~vt~~  195 (441)
T d1qnia2         148 DFSLDNSYTMFTAIDAETMDVAWQVIV-DGNLDNTDADYTGKYATSTCY  195 (441)
T ss_dssp             CCCGGGEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEES
T ss_pred             ccccccccceEEeecCccceeeEEEec-CCCccceEECCCCCEEEEEec
Confidence                     235578888887777653 345788999999999988764

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.65  E-value=1.3e-06  Score=49.97  Aligned_cols=100  Identities=12%  Similarity=0.123  Sum_probs=71.5

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-   84 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-   84 (116)
                      .+..+++.| +++++++...+++|+.++.. ++.. .+...      ...+.+++++++|.++++...++.+..++... 
T Consensus        29 ~~e~iAv~p-dG~l~vt~~~~~~I~~i~p~-g~~~-~~~~~------~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~   99 (302)
T d2p4oa1          29 FLENLASAP-DGTIFVTNHEVGEIVSITPD-GNQQ-IHATV------EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS   99 (302)
T ss_dssp             CEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEE-EEEEC------SSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred             CcCCEEECC-CCCEEEEeCCCCEEEEEeCC-CCEE-EEEcC------CCCcceEEEcCCCCeEEEecCCceEEEEEeccc
Confidence            467899999 78988888889999999865 4433 23222      35689999999999888888888887777543 


Q ss_pred             -CeEEEEee-cccccEEEEEECCCCcEEEeee
Q psy17133         85 -GKLVHSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        85 -~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                       +....... ........+++.++++++++.+
T Consensus       100 ~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~  131 (302)
T d2p4oa1         100 DGTVETLLTLPDAIFLNGITPLSDTQYLTADS  131 (302)
T ss_dssp             TSCEEEEEECTTCSCEEEEEESSSSEEEEEET
T ss_pred             ccceeeccccCCccccceeEEccCCCEEeecc
Confidence             33322222 2344678899999998877643

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.64  E-value=1.6e-06  Score=48.41  Aligned_cols=94  Identities=17%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             EEccCC--CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-C-----CeEEEEEC
Q psy17133         11 DFVRDE--STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-D-----RHIRFFDN   82 (116)
Q Consensus        11 ~~~~~~--~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d-----~~i~~~~~   82 (116)
                      ..+| +  |+.++..+ ++.|.+.|+.+++.. .+...      .+......|+|||+.|+.... +     ..|.+++.
T Consensus         5 ~~sP-di~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~------~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~   75 (281)
T d1k32a2           5 LLNP-DIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSN------LGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG   75 (281)
T ss_dssp             CEEE-EEETTEEEEEE-TTEEEEEETTTCCEE-EEECS------SSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET
T ss_pred             ccCC-CCCCCEEEEEe-CCcEEEEECCCCCEE-EEecC------CCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEe
Confidence            3467 5  67777655 457999999877654 45444      356788999999998876532 1     24777888


Q ss_pred             CCCeEEEEeec------ccccEEEEEECCCCcEEEee
Q psy17133         83 VSGKLVHSMVA------HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        83 ~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .+++..+....      .........|+|+|+.|+..
T Consensus        76 ~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~  112 (281)
T d1k32a2          76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST  112 (281)
T ss_dssp             TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred             cCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence            87776553221      12244678899999988753

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.60  E-value=3.5e-06  Score=47.17  Aligned_cols=101  Identities=15%  Similarity=0.122  Sum_probs=70.3

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++++.+ +++.+++...+..+..++..... ...+....     ......+++.+++.++++....+.|..++...
T Consensus       140 ~~p~~i~~~~-~g~~~v~~~~~~~i~~~d~~~~~-~~~~~~~~-----~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~  212 (260)
T d1rwia_         140 NDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNN-QVVLPFTD-----ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS  212 (260)
T ss_dssp             CSCCEEEECT-TCCEEEEEGGGTEEEEECTTTCC-EEECCCSS-----CCSEEEEEECTTCCEEEEETTTTEEEEECTTC
T ss_pred             CCcceeeecC-CCCEeeeccccccccccccccce-eeeeeccc-----cCCCccceeeeeeeeeeeecCCCEEEEEeCCC
Confidence            3567889988 77877777778899999987443 33332221     34578999999999888888888898888654


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ..........-.....|+++++|.++++
T Consensus       213 ~~~~~~~~~~~~~P~~i~~d~~g~l~va  240 (260)
T d1rwia_         213 TTSTVLPFTGLNTPLAVAVDSDRTVYVA  240 (260)
T ss_dssp             SCCEECCCCSCCCEEEEEECTTCCEEEE
T ss_pred             CeEEEEccCCCCCeEEEEEeCCCCEEEE
Confidence            4322211222245789999999987765

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.58  E-value=4.2e-06  Score=49.13  Aligned_cols=103  Identities=16%  Similarity=0.062  Sum_probs=66.5

Q ss_pred             ceEEEEccCCCcEEEEee-CCCeEEEEECCCCcee---EEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CCCeEEEEE
Q psy17133          7 PTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPV---VRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DDRHIRFFD   81 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d~~i~~~~   81 (116)
                      +.++.|+| +++++++.. ....|.+|+......+   ........    ......+.++|++++++... .++.|.+|+
T Consensus       147 ~h~v~~sP-dG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~----g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~  221 (365)
T d1jofa_         147 IHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP----GDHPRWVAMHPTGNYLYALMEAGNRICEYV  221 (365)
T ss_dssp             EEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST----TCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ceEEEECC-CCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCC----CCceEEEEECCCCceEEEeccCCCEEEEEE
Confidence            56899999 778777665 3567888876533222   22222111    34688999999999886655 478999999


Q ss_pred             CCCCeE--EEEee-----------------cccccEEEEEECCCCcEEEeee
Q psy17133         82 NVSGKL--VHSMV-----------------AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        82 ~~~~~~--~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +..+..  .....                 ........+.++|+|++|+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         222 IDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             ECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             ecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence            865432  21111                 0112356789999999988754

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=98.57  E-value=1.3e-06  Score=52.68  Aligned_cols=91  Identities=7%  Similarity=-0.062  Sum_probs=65.8

Q ss_pred             EEEeeCCCeEEEEECCCCceeEEEecCCcC------------------------cCCCCceeEEEEcCCCCEEEEEe-CC
Q psy17133         20 MVTAFDNSACVLFDLETGKPVVRIDSSQFG------------------------VSGGGGINRVVCHPTLPLTITAH-DD   74 (116)
Q Consensus        20 l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~------------------------~~~~~~i~~~~~~~~~~~~~~~~-~d   74 (116)
                      +++++.+|+|++|++.+++.+..+..-...                        ..|..........|||++++... .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            566678999999999999988877542110                        01122334445568999886654 57


Q ss_pred             CeEEEEECCCCeEEEEee-cccccEEEEEECCCCcEE
Q psy17133         75 RHIRFFDNVSGKLVHSMV-AHLDAVTSLAVDPQGLYI  110 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l  110 (116)
                      +.|.++|+++++....+. .....+..++|+|+++.+
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~  130 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTN  130 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCC
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEE
Confidence            899999999999887765 345678999999999943

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.56  E-value=6.1e-06  Score=47.54  Aligned_cols=100  Identities=16%  Similarity=0.240  Sum_probs=68.2

Q ss_pred             ceEEEEccCCCc-----EEEEeeCCCeEEEEECCCCceeE------EEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          7 PTSIDFVRDEST-----KMVTAFDNSACVLFDLETGKPVV------RIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         7 v~~~~~~~~~~~-----~l~~~~~~~~v~i~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      ...++|+| +++     ++++-+..+.|..|++.....+.      .+....     ......+++.++|.+.++....+
T Consensus       174 pNGi~~~~-d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~-----~~~pdGiavD~~GnlyVa~~~~g  247 (314)
T d1pjxa_         174 PNGIAVRH-MNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH-----EGGADGMDFDEDNNLLVANWGSS  247 (314)
T ss_dssp             EEEEEEEE-CTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS-----SCEEEEEEEBTTCCEEEEEETTT
T ss_pred             eeeeEECC-CCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccc-----cccceeeEEecCCcEEEEEcCCC
Confidence            34678887 332     34444567888888875332221      111111     23466899999999888888889


Q ss_pred             eEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         76 HIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        76 ~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .|.+|+.+.++.+..+........+++|.|+++.|+.
T Consensus       248 ~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyV  284 (314)
T d1pjxa_         248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFV  284 (314)
T ss_dssp             EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEE
T ss_pred             EEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEE
Confidence            9999998877766666555567889999999986543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.49  E-value=4.2e-06  Score=46.56  Aligned_cols=90  Identities=18%  Similarity=0.062  Sum_probs=57.4

Q ss_pred             CceEEEEccCCCcEEEEee-CCCeEE--EEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---CCeEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAF-DNSACV--LFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---DRHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~-~~~~v~--i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---d~~i~~   79 (116)
                      ......|+| ++..++..+ ..+...  +.+...+.  ......      ........|+|||+.|+..+.   ...|.+
T Consensus       172 ~~~~~~~sp-dg~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~------~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~  242 (269)
T d2hqsa1         172 QNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGG--VQVLSS------TFLDETPSLAPNGTMVIYSSSQGMGSVLNL  242 (269)
T ss_dssp             EEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCC--EEECCC------SSSCEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred             ccccccccc-ccceeEEEeecCCceeeeEeeccccc--ceEeec------CccccceEECCCCCEEEEEEcCCCCcEEEE
Confidence            345678999 667666554 444444  44544333  233333      345677899999998765443   346889


Q ss_pred             EECCCCeEEEEeecccccEEEEEECC
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDP  105 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~  105 (116)
                      +++..+.. ..+....+.+...+|+|
T Consensus       243 ~~~dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         243 VSTDGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             EETTSCCE-EECCCSSSEEEEEEECC
T ss_pred             EECCCCCE-EEEeCCCCcEEeEEeCC
Confidence            99986655 44554566788899998

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.49  E-value=1.2e-05  Score=45.32  Aligned_cols=102  Identities=13%  Similarity=0.197  Sum_probs=73.8

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC-CCeEEEEEC
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD-DRHIRFFDN   82 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~~i~~~~~   82 (116)
                      ...+..+++.+ +++.+++....+.|++|+.. ++.+..+.....    ......+++.++|.++++-.. +..|.+|+.
T Consensus       156 ~~~~~~i~~d~-~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~----~~~P~giavD~~G~i~Vad~~~~~~v~~f~~  229 (279)
T d1q7fa_         156 LEFPNGVVVND-KQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGI----TNYPIGVGINSNGEILIADNHNNFNLTIFTQ  229 (279)
T ss_dssp             CSSEEEEEECS-SSEEEEEEGGGTEEEEEETT-CCEEEEESCTTT----SCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred             ccccceeeecc-ceeEEeeeccccceeeeecC-Cceeeeeccccc----ccCCcccccccCCeEEEEECCCCcEEEEECC
Confidence            34566788887 67888887888999999975 777777643211    345789999999997776543 557999984


Q ss_pred             CCCeEEEEeecc--cccEEEEEECCCCcEEEe
Q psy17133         83 VSGKLVHSMVAH--LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~  112 (116)
                       +|+.+..+...  ......+++.|+|+++++
T Consensus       230 -~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~  260 (279)
T d1q7fa_         230 -DGQLISALESKVKHAQCFDVALMDDGSVVLA  260 (279)
T ss_dssp             -TSCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred             -CCCEEEEEeCCCCCCCEeEEEEeCCCcEEEE
Confidence             58877776532  235789999999986654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.37  E-value=2.4e-05  Score=43.66  Aligned_cols=102  Identities=14%  Similarity=0.116  Sum_probs=69.0

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+.++++.+ +++++++-..+..+..++..... ...+....     ......+++++++.++++...++.|..++...
T Consensus        98 ~~p~~iavd~-~g~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~-----~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~  170 (260)
T d1rwia_          98 NYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKT-QTVLPFTG-----LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  170 (260)
T ss_dssp             CSEEEEEECT-TCCEEEEEGGGTEEEEECTTCSS-CEECCCCS-----CCSCCEEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred             eecccccccc-cceeEeeccccccccccccccce-eeeeeecc-----cCCcceeeecCCCCEeeecccccccccccccc
Confidence            4567888888 66777766667777777765432 22222111     23467899999999888888889999999875


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ................++++++++++++.
T Consensus       171 ~~~~~~~~~~~~~p~gi~~d~~g~l~vsd  199 (260)
T d1rwia_         171 NNQVVLPFTDITAPWGIAVDEAGTVYVTE  199 (260)
T ss_dssp             CCEEECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred             ceeeeeeccccCCCccceeeeeeeeeeee
Confidence            44333222334567889999999877654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.33  E-value=3.9e-05  Score=44.12  Aligned_cols=107  Identities=13%  Similarity=0.151  Sum_probs=69.8

Q ss_pred             CceEEEEccCCCcEE-EEeeCCCeEEEEECCC-CceeEEEecCCc-CcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy17133          6 TPTSIDFVRDESTKM-VTAFDNSACVLFDLET-GKPVVRIDSSQF-GVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDN   82 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~-~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~   82 (116)
                      ....++|+| +++.| ++-+..++|+.|++.. +........... ..........+++.++|.+.++....+.|.+++.
T Consensus       178 ~pnGia~s~-dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p  256 (319)
T d2dg1a1         178 VANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK  256 (319)
T ss_dssp             SEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             eeeeeeecc-ccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC
Confidence            346789999 55654 5556788999998763 222111110000 0000234678999999998888888999999995


Q ss_pred             CCCeEEEEeec------ccccEEEEEECCCCcEEEeee
Q psy17133         83 VSGKLVHSMVA------HLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        83 ~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~s  114 (116)
                       .|+.+..+..      +...+.+++|.++...+++.+
T Consensus       257 -~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         257 -RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             -TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             -CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence             5888777652      233578999999877666543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=4.9e-05  Score=42.10  Aligned_cols=79  Identities=10%  Similarity=0.005  Sum_probs=54.7

Q ss_pred             eEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC---CeEEEEECCCCeEEEEeecccccEEEEEEC
Q psy17133         28 ACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD---RHIRFFDNVSGKLVHSMVAHLDAVTSLAVD  104 (116)
Q Consensus        28 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d---~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~  104 (116)
                      .|.+.|....+......+.       ..+...+|+|||+.|+.....   ..+.+.+...+.... +..+........|+
T Consensus        20 ~l~i~d~dG~~~~~l~~~~-------~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s   91 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFS   91 (269)
T ss_dssp             EEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSSCEEEEEEC
T ss_pred             EEEEEcCCCCCcEEEecCC-------CceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeE-Eeeeecccccceec
Confidence            5888887644444443333       467899999999988876543   357777777665544 33456677889999


Q ss_pred             CCCcEEEeee
Q psy17133        105 PQGLYILSGT  114 (116)
Q Consensus       105 ~~~~~l~~~s  114 (116)
                      |+|+.++...
T Consensus        92 pdg~~i~~~~  101 (269)
T d2hqsa1          92 PDGSKLAFAL  101 (269)
T ss_dssp             TTSSEEEEEE
T ss_pred             CCCCeeeEee
Confidence            9999887543

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.26  E-value=5.6e-05  Score=42.58  Aligned_cols=102  Identities=13%  Similarity=0.243  Sum_probs=73.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS   84 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~   84 (116)
                      ..+..+++.+ ++..+++......+.+++.. ++.+..+.....    ......+++.+++.++++....+.|.+|+.. 
T Consensus       114 ~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~----~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~-  186 (279)
T d1q7fa_         114 QHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKH----LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-  186 (279)
T ss_dssp             SCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTT----CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-
T ss_pred             cccceecccc-CCcEEEEeeccceeeEeccC-Cceeeccccccc----ccccceeeeccceeEEeeeccccceeeeecC-
Confidence            3456677777 66777776677778888764 666666643321    3567889999999888888888999999965 


Q ss_pred             CeEEEEee--cccccEEEEEECCCCcEEEee
Q psy17133         85 GKLVHSMV--AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        85 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ++.+..+.  +.......++++++|+++++-
T Consensus       187 G~~~~~~g~~g~~~~P~giavD~~G~i~Vad  217 (279)
T d1q7fa_         187 GQYLRQIGGEGITNYPIGVGINSNGEILIAD  217 (279)
T ss_dssp             CCEEEEESCTTTSCSEEEEEECTTCCEEEEE
T ss_pred             CceeeeecccccccCCcccccccCCeEEEEE
Confidence            67776664  233457889999999877653

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.24  E-value=7e-05  Score=43.86  Aligned_cols=110  Identities=5%  Similarity=-0.014  Sum_probs=65.6

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCceeE--E---EecCCc--------CcCCCCceeEEEEcCCCCEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPVV--R---IDSSQF--------GVSGGGGINRVVCHPTLPLTIT   70 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~~--~---~~~~~~--------~~~~~~~i~~~~~~~~~~~~~~   70 (116)
                      ..+..+.|+| +++++.+.. .+++|.+|+...++...  .   ...-..        ..........+.++|+|+++++
T Consensus       193 ~gPr~i~f~p-dg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv  271 (365)
T d1jofa_         193 DHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             CCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             CceEEEEECC-CCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEE
Confidence            4578899999 677665544 68899999987554221  1   111000        0011223557899999998877


Q ss_pred             EeC------CCeEEEEECCC-CeEEEEe-----ecccccEEEEEECC-CCcEEEeeec
Q psy17133         71 AHD------DRHIRFFDNVS-GKLVHSM-----VAHLDAVTSLAVDP-QGLYILSGTY  115 (116)
Q Consensus        71 ~~~------d~~i~~~~~~~-~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~s~  115 (116)
                      +..      ...|..|++.. +......     .........++++| +|++|+.+..
T Consensus       272 snr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~  329 (365)
T d1jofa_         272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD  329 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred             EcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeC
Confidence            642      23477777653 3322211     11234567899998 8998877653

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.19  E-value=9.5e-05  Score=42.49  Aligned_cols=99  Identities=11%  Similarity=0.066  Sum_probs=67.9

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC----CCeEEEEEC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD----DRHIRFFDN   82 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----d~~i~~~~~   82 (116)
                      +..+.|.+ ++++.++-..+++|+.|+..+++....+...      ......++++++|+++++...    .+.+...+.
T Consensus        42 lEG~~~D~-~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~------~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~  114 (319)
T d2dg1a1          42 LEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSH------KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE  114 (319)
T ss_dssp             EEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECS------SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred             cEeCEECC-CCCEEEEECCCCEEEEEECCCCeEEEEEeCC------CCCeeEEEECCCCCEEEEecCCCccceeEEEEcC
Confidence            36789998 7787777777889999998766555444433      356789999999998777543    234555565


Q ss_pred             CCCeEEEEeec--ccccEEEEEECCCCcEEEe
Q psy17133         83 VSGKLVHSMVA--HLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~  112 (116)
                      ..+........  .......+++.++|++.++
T Consensus       115 ~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vt  146 (319)
T d2dg1a1         115 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFT  146 (319)
T ss_dssp             TSCSCEEEECSSSSCCCEEEEEECTTSCEEEE
T ss_pred             CCceeeeeccCCCcccCCcceeEEeccceeec
Confidence            55554443321  1235778899999987765

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.08  E-value=0.00016  Score=41.14  Aligned_cols=102  Identities=23%  Similarity=0.283  Sum_probs=69.9

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCC--C----ceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLET--G----KPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~--~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      ....+.|++++..++++-+..+.|+.+++..  +    +..........    .+....+++..+|.+.++.-..+.|..
T Consensus       149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~----~g~pdG~~vD~~GnlWva~~~~g~V~~  224 (295)
T d2ghsa1         149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI----KGGMDGSVCDAEGHIWNARWGEGAVDR  224 (295)
T ss_dssp             SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS----SSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred             CcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcc----cccccceEEcCCCCEEeeeeCCCceEE
Confidence            3467889994434555666788899888642  1    11111111111    456788999999998888778889999


Q ss_pred             EECCCCeEEEEeecccccEEEEEEC-CCCcEEEe
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVD-PQGLYILS  112 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~  112 (116)
                      |+. .|+.+..+......+++++|- |+.+.|+.
T Consensus       225 ~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         225 YDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLV  257 (295)
T ss_dssp             ECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEE
T ss_pred             ecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEE
Confidence            995 588888877555679999995 67666653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=97.95  E-value=0.00019  Score=40.77  Aligned_cols=58  Identities=17%  Similarity=0.172  Sum_probs=45.9

Q ss_pred             ceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeee
Q psy17133         55 GINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      .+..++++|||+++++...+++|..++.. ++.. .+......+..++|+++|+++++..
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~~~-~~~~~~~~~~gla~~~dG~l~v~~~   86 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GNQQ-IHATVEGKVSGLAFTSNGDLVATGW   86 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEEECSSEEEEEEECTTSCEEEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CCEE-EEEcCCCCcceEEEcCCCCeEEEec
Confidence            57889999999999999889999999865 4433 3334556789999999999877653

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=2.1e-05  Score=47.62  Aligned_cols=100  Identities=10%  Similarity=0.073  Sum_probs=66.9

Q ss_pred             EEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeC---------CCeEEE
Q psy17133          9 SIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHD---------DRHIRF   79 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------d~~i~~   79 (116)
                      ...|.+ ++.++. -..++.+.+|+..+++....+....-   ..-.+....++||++.++...+         .+.+.+
T Consensus        21 ~~~W~~-~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i   95 (465)
T d1xfda1          21 EAKWIS-DTEFIY-REQKGTVRLWNVETNTSTVLIEGKKI---ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (465)
T ss_dssp             CCCBSS-SSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTT---TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             CCEEeC-CCcEEE-EeCCCcEEEEECCCCCEEEEEcCccc---cccccceeEECCCCCeEEEEEcccceeEeeccccEEE
Confidence            356777 555443 45577899999988876554544311   0234677889999998776643         467899


Q ss_pred             EECCCCeEEEEee--cccccEEEEEECCCCcEEEee
Q psy17133         80 FDNVSGKLVHSMV--AHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        80 ~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      +|+.++.......  .....+....|+|||+.+|-.
T Consensus        96 ~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv  131 (465)
T d1xfda1          96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFI  131 (465)
T ss_dssp             EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEE
T ss_pred             EEccCCceeeccCccCCccccceeeeccCCceEEEE
Confidence            9999887654322  223345668899999988744

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=97.87  E-value=0.00034  Score=40.10  Aligned_cols=70  Identities=19%  Similarity=0.348  Sum_probs=54.1

Q ss_pred             ceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEEEeCCCeEEEEECC
Q psy17133          7 PTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTITAHDDRHIRFFDNV   83 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~i~~~~~~   83 (116)
                      +-.+++.. +++..++....+.|.+|+...++.+..+...      ...+++++|.|+++ +.++.+.++.|..+++.
T Consensus       228 pdGiavD~-~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p------~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~  298 (314)
T d1pjxa_         228 ADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCP------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ  298 (314)
T ss_dssp             EEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECS------SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred             ceeeEEec-CCcEEEEEcCCCEEEEEeCCCCEEEEEEECC------CCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence            45688887 7888887778899999998877766666654      34678999999987 44666677888888864

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.65  E-value=0.00024  Score=39.28  Aligned_cols=52  Identities=19%  Similarity=0.153  Sum_probs=39.4

Q ss_pred             EEcCC--CCEEEEEeCCCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEee
Q psy17133         60 VCHPT--LPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        60 ~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  113 (116)
                      .++|+  |+.++..+ ++.|.+.|+.+++..+ +..+.+.....+|+|||++|+-.
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~-Lt~~~~~~~~p~~SPDG~~iaf~   58 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK-IVSNLGVINNARFFPDGRKIAIR   58 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE-EECSSSEEEEEEECTTSSEEEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE-EecCCCcccCEEECCCCCEEEEE
Confidence            35688  88777664 4578888999887654 44456678899999999998854

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.53  E-value=0.0018  Score=36.66  Aligned_cols=96  Identities=11%  Similarity=0.007  Sum_probs=66.5

Q ss_pred             eEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeE
Q psy17133          8 TSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKL   87 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~   87 (116)
                      .+..|.+.++.+..+--..++|+.||..+++. ..+...       ..+.++.+.+++.++++. . .-+..+|..+++.
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~-~~~~~~-------~~~~~i~~~~dg~l~va~-~-~gl~~~d~~tg~~   90 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRK-TVHALP-------FMGSALAKISDSKQLIAS-D-DGLFLRDTATGVL   90 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEECS-------SCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCE
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeE-EEEECC-------CCcEEEEEecCCCEEEEE-e-CccEEeeccccee
Confidence            45678875555666655788999999987754 344332       357889988898777654 3 4688999998876


Q ss_pred             EEEeec----ccccEEEEEECCCCcEEEee
Q psy17133         88 VHSMVA----HLDAVTSLAVDPQGLYILSG  113 (116)
Q Consensus        88 ~~~~~~----~~~~v~~~~~~~~~~~l~~~  113 (116)
                      ......    ....+..+.+.|+|++.++.
T Consensus        91 ~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~  120 (295)
T d2ghsa1          91 TLHAELESDLPGNRSNDGRMHPSGALWIGT  120 (295)
T ss_dssp             EEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred             eEEeeeecCCCcccceeeEECCCCCEEEEe
Confidence            544321    12357889999999977653

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.05  E-value=0.005  Score=38.22  Aligned_cols=76  Identities=18%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  105 (116)
                      +.+.-+|+.+++.+-..+...       ....-.+...+.+++.++.|+.++.+|.++|+.+..+..... .-.=+.|..
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~-------p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~  538 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL-------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ  538 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-------CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             CeEEEEcCCCCcEEeecCCCC-------CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEE
Confidence            567788888888777665442       111111234566888899999999999999999988763221 111256667


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       539 ~G~q  542 (582)
T d1flga_         539 DGEQ  542 (582)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            8863

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.86  E-value=0.017  Score=34.79  Aligned_cols=94  Identities=11%  Similarity=0.096  Sum_probs=65.2

Q ss_pred             CCcEEEEee-CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCC--CCEEEEEeCC------------------
Q psy17133         16 ESTKMVTAF-DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPT--LPLTITAHDD------------------   74 (116)
Q Consensus        16 ~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~d------------------   74 (116)
                      +|+++++.. .+.+|.+-|+.+.+.....+...     ...+..++..++  -.+++..+..                  
T Consensus        98 DGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn-----~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~  172 (459)
T d1fwxa2          98 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-----AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV  172 (459)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-----CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EE
T ss_pred             ceeEEEEEcCCCceEEEEECcceeeeEEEecCC-----CCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcc
Confidence            467777665 68899999999888765444332     235676666554  4466665542                  


Q ss_pred             CeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEeeec
Q psy17133         75 RHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        75 ~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +.+..+|.++.+...+... .+....+.++++|+++++.+.
T Consensus       173 ~~~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~Tsy  212 (459)
T d1fwxa2         173 NVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSY  212 (459)
T ss_dssp             EEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEES
T ss_pred             eEEEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEec
Confidence            2367789998888777653 335668899999999998775

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.75  E-value=0.019  Score=34.06  Aligned_cols=97  Identities=6%  Similarity=0.002  Sum_probs=59.5

Q ss_pred             eEEEEccCCCcEEEEe-e----CCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC--------
Q psy17133          8 TSIDFVRDESTKMVTA-F----DNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD--------   74 (116)
Q Consensus         8 ~~~~~~~~~~~~l~~~-~----~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d--------   74 (116)
                      ..+.++| ++++++.+ +    +...++++|+.+++.+......       .....+.|.+++..++....+        
T Consensus       128 ~~~~~Sp-d~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-------~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~  199 (430)
T d1qfma1         128 RGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-------VKFSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (430)
T ss_dssp             EEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-------ECSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             cceEecC-CCCEEEEEeccccCchheeEEeccCcceeccccccc-------ccccceEEcCCCCEEEEEEeccccCcccc
Confidence            4567889 66777653 2    3446999999999865432211       123578899999877654322        


Q ss_pred             --------CeEEEEECCCCeE--EEEeecc--cccEEEEEECCCCcEEEe
Q psy17133         75 --------RHIRFFDNVSGKL--VHSMVAH--LDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        75 --------~~i~~~~~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~  112 (116)
                              ..+..+.+.+...  ...+...  ...+..+..++++++++.
T Consensus       200 ~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i  249 (430)
T d1qfma1         200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLL  249 (430)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred             cccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeE
Confidence                    3577787765432  2223322  234566777899998763

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.51  E-value=0.013  Score=36.30  Aligned_cols=76  Identities=8%  Similarity=0.046  Sum_probs=50.3

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccccc-EEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLDA-VTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~  105 (116)
                      +.+.-||+.+++.+-..+...       ....-.+.-.+.+++.++.|+.++.+|.++|+.+..+...... -.=+.|..
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~-------p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~  529 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVS-------PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMV  529 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             ccEEEeCCCCCceEeeecCCC-------CCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEE
Confidence            468889999998877766442       1111122335778888999999999999999999887632210 01144555


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       530 ~GkQ  533 (573)
T d1kb0a2         530 DGRQ  533 (573)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            7763

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.48  E-value=0.028  Score=34.81  Aligned_cols=76  Identities=18%  Similarity=0.080  Sum_probs=46.8

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  105 (116)
                      +.+.-+|+.+++.+-......      ..... .+...+.+++.++.|+.++.+|.++|+.+..+..... .-.=+.|..
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~------~~~~g-~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~  516 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKF------AAWGG-TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF  516 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESS------CCCSB-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             ccEEEeccCCCceeeEcCCCC------CCCcc-eeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEEEE
Confidence            457777888877665554321      11111 1122355777899999999999999999988763211 111245556


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       517 dGkq  520 (571)
T d2ad6a1         517 KGKQ  520 (571)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            7764

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.029  Score=31.14  Aligned_cols=98  Identities=11%  Similarity=0.006  Sum_probs=61.6

Q ss_pred             ceEEEEccCCCcEEEE-eeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEE-EEeCCCeEEEEECCC
Q psy17133          7 PTSIDFVRDESTKMVT-AFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTI-TAHDDRHIRFFDNVS   84 (116)
Q Consensus         7 v~~~~~~~~~~~~l~~-~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~d~~i~~~~~~~   84 (116)
                      +.+++|.+ ..+.+.- -...+.|+..++........+...      ...+..++++.-+..++ +-...+.|.+.++..
T Consensus        38 ~~~ld~D~-~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~------~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg  110 (263)
T d1npea_          38 IIGLAFDC-VDKVVYWTDISEPSIGRASLHGGEPTTIIRQD------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (263)
T ss_dssp             EEEEEEET-TTTEEEEEETTTTEEEEEESSSCCCEEEECTT------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             EEEEEEEe-CCCEEEEEECCCCeEEEEEcccCCcEEEEEec------cccccEEEEeccCCeEEEeccCCCEEEEEecCC
Confidence            55678887 4455544 446677888888754443333332      24678999987655554 555678999999875


Q ss_pred             CeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         85 GKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        85 ~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      .............+..++.+|...+++
T Consensus       111 ~~~~~l~~~~l~~p~~l~vdp~~g~ly  137 (263)
T d1npea_         111 TQRRVLFDTGLVNPRGIVTDPVRGNLY  137 (263)
T ss_dssp             CSCEEEECSSCSSEEEEEEETTTTEEE
T ss_pred             ceEEEEecccccCCcEEEEecccCcEE
Confidence            543333333335678888888766554

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.21  E-value=0.041  Score=31.65  Aligned_cols=98  Identities=11%  Similarity=0.042  Sum_probs=59.7

Q ss_pred             ccCCCcEEEEeeCC-----C------eEEEEECCCCcee--EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC-CeEE
Q psy17133         13 VRDESTKMVTAFDN-----S------ACVLFDLETGKPV--VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD-RHIR   78 (116)
Q Consensus        13 ~~~~~~~l~~~~~~-----~------~v~i~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d-~~i~   78 (116)
                      .+.+++.++.|+.+     +      .+.+||..+++..  .......     ........+.+++++++.++.+ ..+.
T Consensus        27 ~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~-----~~~~~~~~~~~~g~i~v~Gg~~~~~~~  101 (387)
T d1k3ia3          27 EPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH-----DMFCPGISMDGNGQIVVTGGNDAKKTS  101 (387)
T ss_dssp             ETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC-----CCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred             EeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCc-----ccceeEEEEecCCcEEEeecCCCccee
Confidence            34367777776631     1      3678999876543  2222221     2234466788999988887654 6899


Q ss_pred             EEECCCCeEEEEeecc-cccEEEEEECCCCcEEEeeec
Q psy17133         79 FFDNVSGKLVHSMVAH-LDAVTSLAVDPQGLYILSGTY  115 (116)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~  115 (116)
                      +||..+......-... .......+..+++++++.++.
T Consensus       102 ~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~  139 (387)
T d1k3ia3         102 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGS  139 (387)
T ss_dssp             EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCC
T ss_pred             EecCccCcccccccccccccccceeeecCCceeeeccc
Confidence            9999877654322111 112234666788888887764

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=96.17  E-value=0.027  Score=34.80  Aligned_cols=76  Identities=11%  Similarity=0.110  Sum_probs=49.2

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  105 (116)
                      +.+.-+|+.+++.+-..+...       ....-.+.-.+-+++.++.|+.++.+|.++|+.+..+..... .-.=+.|..
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~-------~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~  510 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPT-------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL  510 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESS-------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             cceEEEeCCCCeEeeeccCCC-------CCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEE
Confidence            467788999888776665431       111112233466788899999999999999999988763221 111245556


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       511 dGkq  514 (560)
T d1kv9a2         511 AGRQ  514 (560)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            7763

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.05  E-value=0.02  Score=35.69  Aligned_cols=76  Identities=11%  Similarity=-0.006  Sum_probs=48.0

Q ss_pred             CeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccc-cEEEEEECC
Q psy17133         27 SACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMVAHLD-AVTSLAVDP  105 (116)
Q Consensus        27 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  105 (116)
                      +.+.-||..+++.+-......       ...+-.+...+.+++.+..|+.++.+|.++|+.+..+..... .-.=+.|..
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~-------~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~  525 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERF-------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTH  525 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred             ceEEEEeCCCCceecccCCCC-------CCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEE
Confidence            467888888887765543321       111111233466788899999999999999999988763221 111134555


Q ss_pred             CCcE
Q psy17133        106 QGLY  109 (116)
Q Consensus       106 ~~~~  109 (116)
                      +|+.
T Consensus       526 dGkQ  529 (596)
T d1w6sa_         526 KGTQ  529 (596)
T ss_dssp             TTEE
T ss_pred             CCEE
Confidence            7764

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.82  E-value=0.076  Score=31.45  Aligned_cols=57  Identities=9%  Similarity=0.025  Sum_probs=38.6

Q ss_pred             ceeEEEEcCCCCEEEEE-eC----CCeEEEEECCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         55 GINRVVCHPTLPLTITA-HD----DRHIRFFDNVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        55 ~i~~~~~~~~~~~~~~~-~~----d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      .+...+++|++++++.+ +.    ...++++|+.+++.+...... .....++|.++++.|+-
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-~~~~~~~W~~D~~~~~Y  187 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFY  187 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEE
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc-ccccceEEcCCCCEEEE
Confidence            34567889999877643 22    346999999999876532211 12246889999987753

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.76  E-value=0.086  Score=31.61  Aligned_cols=110  Identities=13%  Similarity=0.153  Sum_probs=60.5

Q ss_pred             CCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC--CcCcCCCCceeEEEEcCC---CCEEEEEeC-----
Q psy17133          4 NGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS--QFGVSGGGGINRVVCHPT---LPLTITAHD-----   73 (116)
Q Consensus         4 ~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~---~~~~~~~~~-----   73 (116)
                      ...+.+++|.| +++++++--..++|++++..+++........  .....-++....++++|+   ..+++....     
T Consensus        26 L~~P~~la~~p-dg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~  104 (450)
T d1crua_          26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK  104 (450)
T ss_dssp             CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred             CCCceEEEEeC-CCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCC
Confidence            35678999999 7787776655789999987766543222111  000111356789999985   334433211     


Q ss_pred             --C----Ce--EEEEECCCC--e-----E-EEEee-cccccEEEEEECCCCcEEEeee
Q psy17133         74 --D----RH--IRFFDNVSG--K-----L-VHSMV-AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        74 --d----~~--i~~~~~~~~--~-----~-~~~~~-~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                        +    +.  +..+.....  .     . +..+. ...+....+.|.||+.++++.+
T Consensus       105 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H~gg~l~fgpDG~LYvs~G  162 (450)
T d1crua_         105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (450)
T ss_dssp             C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             CcccccccceEEEeeecccccccccceEEEeecccccccccccceeEcCCCCEEEEec
Confidence              0    11  333332211  1     1 11111 1223567899999998777654

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.097  Score=28.98  Aligned_cols=102  Identities=10%  Similarity=-0.008  Sum_probs=61.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe--CCCeEEEEEC
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH--DDRHIRFFDN   82 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~d~~i~~~~~   82 (116)
                      ..+.++++.+..++...+-...+.|.+.++............      ......++++|...+++...  ..+.|...++
T Consensus        77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~------~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~  150 (266)
T d1ijqa1          77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL  150 (266)
T ss_dssp             SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT------TCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred             CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCC------CCCcceEEEEcccCeEEEeccCCCcceeEecc
Confidence            345677776644455555566788999998755444444433      34678999998755554433  3456776776


Q ss_pred             CCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         83 VSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        83 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      ............-.....+++++.++.|..
T Consensus       151 dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw  180 (266)
T d1ijqa1         151 NGVDIYSLVTENIQWPNGITLDLLSGRLYW  180 (266)
T ss_dssp             TSCCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred             CCCceecccccccceeeEEEeeccccEEEE
Confidence            643333333323345678888887666554

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.54  E-value=0.19  Score=28.82  Aligned_cols=94  Identities=9%  Similarity=0.042  Sum_probs=64.2

Q ss_pred             EEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEE
Q psy17133         10 IDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVS-GKLV   88 (116)
Q Consensus        10 ~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~   88 (116)
                      .-.+| ..+.|+.-+ ...+.++|+++.+.++.+.-.       ..+....|-.+.. |+.. .+..|+-|+++. ..+.
T Consensus        68 AIMhP-~~~IiALra-g~~LQiFnletK~klks~~~~-------e~VvfWkWis~~~-L~lV-T~taVYHW~~~g~s~P~  136 (327)
T d1utca2          68 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-------DDVTFWKWISLNT-VALV-TDNAVYHWSMEGESQPV  136 (327)
T ss_dssp             EEECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECS-------SCCCEEEESSSSE-EEEE-CSSEEEEEESSSSCCCE
T ss_pred             hhcCC-CCcEEEEec-CCeEEEEehhHhhhhceEEcC-------CCcEEEEecCCCE-EEEE-cCCceEEEcccCCCCch
Confidence            44567 556665554 668999999999888888766       3577777765543 3333 256899999953 2455


Q ss_pred             EEeeccc----ccEEEEEECCCCcEEEeee
Q psy17133         89 HSMVAHL----DAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        89 ~~~~~~~----~~v~~~~~~~~~~~l~~~s  114 (116)
                      +.+..|.    ..|.+-..+++.+|++..+
T Consensus       137 k~fdR~~~L~~~QIInY~~d~~~kW~~l~G  166 (327)
T d1utca2         137 KMFDRHSSLAGCQIINYRTDAKQKWLLLTG  166 (327)
T ss_dssp             EEEECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred             hhhhhcccccCceEEEEEECCCCCEEEEEe
Confidence            5555332    3677788899999987543

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=93.69  E-value=0.37  Score=29.02  Aligned_cols=106  Identities=8%  Similarity=0.068  Sum_probs=62.0

Q ss_pred             CCceEEEEccCCCcEEEEee-CCCeEEEEECCCCcee--------EEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCC
Q psy17133          5 GTPTSIDFVRDESTKMVTAF-DNSACVLFDLETGKPV--------VRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDR   75 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~   75 (116)
                      ..+-.+..+| +++++++++ .+..+.++|++.-...        ..+.+..   ...-...-.+|+.+|....+.--|.
T Consensus       275 KsPHGV~vSP-DGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~---elglgPLht~fd~~g~aytslfids  350 (459)
T d1fwxa2         275 NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---ELGLGPLHTAFDGRGNAYTSLFLDS  350 (459)
T ss_dssp             SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECC---BCCSCEEEEEECTTSEEEEEETTTT
T ss_pred             CCCCceEECC-CCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeec---ccCcCccccccCCCceEEEEeeccc
Confidence            3456789999 677776655 6889999998632111        1111110   0012345567777775555556799


Q ss_pred             eEEEEECCCC----------eEEEEeecccccEEEE-----EECCCCcEEEeee
Q psy17133         76 HIRFFDNVSG----------KLVHSMVAHLDAVTSL-----AVDPQGLYILSGT  114 (116)
Q Consensus        76 ~i~~~~~~~~----------~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~s  114 (116)
                      .|.-|++...          ..+..+..|.+.-...     ...|+|++|++.+
T Consensus       351 ~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         351 QVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             EEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             eEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEec
Confidence            9999998532          3444454443322211     2368899998865

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.10  E-value=0.33  Score=26.74  Aligned_cols=102  Identities=13%  Similarity=0.006  Sum_probs=57.7

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe-CC--CeEEEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH-DD--RHIRFFD   81 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~d--~~i~~~~   81 (116)
                      ..+.++++..-+++...+-...+.|.+.++........+...      ...+..++++|...+++... ..  ..|..-+
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~------l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~  152 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH  152 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEeccc------ccCCcEEEEecccCcEEEeecCCCCcEEEEec
Confidence            456677776523344445556778888888644332222222      24678999999766555433 22  2344445


Q ss_pred             CCCCeEEEEeecccccEEEEEECCCCcEEEe
Q psy17133         82 NVSGKLVHSMVAHLDAVTSLAVDPQGLYILS  112 (116)
Q Consensus        82 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  112 (116)
                      +............-.....+++++..+.|..
T Consensus       153 ~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw  183 (263)
T d1npea_         153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCW  183 (263)
T ss_dssp             TTSCCCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred             CCCCCceeeeeecccccceEEEeecCcEEEE
Confidence            5533333323223345678888887766643

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.87  E-value=0.71  Score=27.59  Aligned_cols=53  Identities=13%  Similarity=0.172  Sum_probs=39.3

Q ss_pred             CceeEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEee--------cccccEEEEEECCC
Q psy17133         54 GGINRVVCHPTLPLTITAHDDRHIRFFDNVSGKLVHSMV--------AHLDAVTSLAVDPQ  106 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~  106 (116)
                      ....+++|.|+++++++.-..|.|++++..+++......        ........++|+|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            467899999999988887668999999987765543221        11346788999985

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.12  E-value=1  Score=27.85  Aligned_cols=50  Identities=10%  Similarity=0.012  Sum_probs=35.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEE
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTIT   70 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~   70 (116)
                      .+.++++++.|+.++.+|.++|+.+-+++....     ..-.-+.+..+|+ +++.
T Consensus       496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~-----~~~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG-----IVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEEETTEEEEEE
T ss_pred             cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCC-----ccccCEEEEECCEEEEEE
Confidence            456777888999999999999999998876522     1122355566775 4443

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=90.93  E-value=0.76  Score=26.15  Aligned_cols=73  Identities=11%  Similarity=0.032  Sum_probs=46.9

Q ss_pred             EEEEccCCCcEEEEeeC-CCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCC------CeEEEEE
Q psy17133          9 SIDFVRDESTKMVTAFD-NSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDD------RHIRFFD   81 (116)
Q Consensus         9 ~~~~~~~~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d------~~i~~~~   81 (116)
                      ...+.+ ++..++.|+. ...+.+||..+..... ......    ...-...+..+|+++++.++..      ..+.+||
T Consensus        80 ~~~~~~-~g~i~v~Gg~~~~~~~~yd~~~~~w~~-~~~~~~----~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd  153 (387)
T d1k3ia3          80 GISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIP-GPDMQV----ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS  153 (387)
T ss_dssp             EEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEE-CCCCSS----CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred             EEEEec-CCcEEEeecCCCcceeEecCccCcccc-cccccc----cccccceeeecCCceeeeccccccccccceeeeec
Confidence            456777 7777777764 4679999988665432 221100    1223466777899988887643      4689999


Q ss_pred             CCCCeE
Q psy17133         82 NVSGKL   87 (116)
Q Consensus        82 ~~~~~~   87 (116)
                      ..+.+-
T Consensus       154 ~~~~~W  159 (387)
T d1k3ia3         154 PSSKTW  159 (387)
T ss_dssp             TTTTEE
T ss_pred             CCCCce
Confidence            887654

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.91  E-value=0.84  Score=25.06  Aligned_cols=101  Identities=9%  Similarity=-0.019  Sum_probs=57.3

Q ss_pred             CCceEEEEccCCCcEEEEe-eCCCeEEEEECCCCc---eeEEEecCCcCcCCCCceeEEEEcCCCCEEEE-EeCCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTA-FDNSACVLFDLETGK---PVVRIDSSQFGVSGGGGINRVVCHPTLPLTIT-AHDDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~-~~~~~v~i~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~d~~i~~   79 (116)
                      +.+.+++|.+ ..+.+.-. ...+.|+..++....   ....+....     ...+..+++.+.+..++. -...+.|.+
T Consensus        30 ~~~~~id~d~-~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~-----~~~p~glAvD~~~~~lY~~d~~~~~I~v  103 (266)
T d1ijqa1          30 RNVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-----IQAPDGLAVDWIHSNIYWTDSVLGTVSV  103 (266)
T ss_dssp             SSEEEEEEET-TTTEEEEEETTTTEEEEEEC--------CEEEECSS-----CSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CceEEEEEEe-CCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCC-----CCCcceEEEeeccceEEEEecCCCEEEe
Confidence            4556777877 44444433 345566665554211   112222111     245678899876655544 455788999


Q ss_pred             EECCCCeEEEEeecccccEEEEEECCCCcEEE
Q psy17133         80 FDNVSGKLVHSMVAHLDAVTSLAVDPQGLYIL  111 (116)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  111 (116)
                      .++..................++.+|...+|.
T Consensus       104 ~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly  135 (266)
T d1ijqa1         104 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMY  135 (266)
T ss_dssp             EETTSSSEEEEEECTTCCEEEEEEETTTTEEE
T ss_pred             EecCCceEEEEEcCCCCCcceEEEEcccCeEE
Confidence            99886554444444445678888888655544

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.90  E-value=1.1  Score=26.33  Aligned_cols=63  Identities=10%  Similarity=-0.049  Sum_probs=33.9

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEe
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAH   72 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   72 (116)
                      .+..+.++|   ..++....++.+.++++..++......+- ...+-.+...+++|++.++.++++.
T Consensus       127 ~~~~~~~~p---~~~~l~~~~~~~~~~~l~~~~~~~~~~~v-~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         127 PVFQLKNVN---NTLVILNSVNDLSALDLRTKSTKQLAQNV-TSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             CEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEESE-EEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             cccceecCC---ceeEEEecCCCEEEEEeccCccccccCCc-ceEEecCCceEEEEeCCcEEEEEeC
Confidence            455566655   34555556778888888766532221110 0000123466777777776666653

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.53  E-value=1.2  Score=27.45  Aligned_cols=49  Identities=10%  Similarity=-0.120  Sum_probs=33.8

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEE
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTIT   70 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~   70 (116)
                      +.++++++.|+.++.+|.++|+.+-+++....     ..-.-+.+..+|+ +++.
T Consensus       475 gglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~-----~~a~P~ty~~dGkqYi~v  524 (571)
T d2ad6a1         475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSG-----GIGSPMTYSFKGKQYIGS  524 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEEETTEEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEECCCC-----ceecceEEEECCEEEEEE
Confidence            46777788999999999999999988865421     1222344555776 4544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=89.12  E-value=1.2  Score=25.59  Aligned_cols=59  Identities=14%  Similarity=0.165  Sum_probs=37.7

Q ss_pred             CceeEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEEEE--eecccccEEEEEECC-CCcEEEe
Q psy17133         54 GGINRVVCHPTLPLTIT-AHDDRHIRFFDNVSGKLVHS--MVAHLDAVTSLAVDP-QGLYILS  112 (116)
Q Consensus        54 ~~i~~~~~~~~~~~~~~-~~~d~~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~  112 (116)
                      ...+.++++|+++.++. -...+.|+.|++.....+..  ...-....-.+.+.+ ++.+.+.
T Consensus       206 ~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva  268 (340)
T d1v04a_         206 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG  268 (340)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred             CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEE
Confidence            35789999999886655 45578899998864332221  112344567788876 4555443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=89.02  E-value=1.4  Score=27.39  Aligned_cols=50  Identities=6%  Similarity=-0.143  Sum_probs=34.2

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEE
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTIT   70 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~   70 (116)
                      .+.+++.+..|+.++.+|..+|+.+-++.....     ..-.-+.+..+|+ +++.
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~-----~~a~P~tY~~dGkQYvav  533 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG-----AIGYPMTYTHKGTQYVAI  533 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEEETTEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEECCCC-----cccCCeEEEECCEEEEEE
Confidence            346777788999999999999999988875521     1122344455776 4443

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=88.93  E-value=1.5  Score=26.98  Aligned_cols=31  Identities=10%  Similarity=0.170  Sum_probs=26.4

Q ss_pred             CCcEEEEeeCCCeEEEEECCCCceeEEEecC
Q psy17133         16 ESTKMVTAFDNSACVLFDLETGKPVVRIDSS   46 (116)
Q Consensus        16 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~   46 (116)
                      .+.++++++.|+.++.+|.++|+.+-++...
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~  517 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTG  517 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECC
Confidence            3467777889999999999999999888765

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=88.91  E-value=1.4  Score=27.01  Aligned_cols=49  Identities=2%  Similarity=-0.043  Sum_probs=33.8

Q ss_pred             CcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCC-EEEE
Q psy17133         17 STKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLP-LTIT   70 (116)
Q Consensus        17 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~   70 (116)
                      +.+++.++.++.++.+|.++|+.+-+++....     ..-.-+.+..+|+ +++.
T Consensus       469 gglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~-----~~~~P~ty~~dGkqyv~v  518 (560)
T d1kv9a2         469 GNLVFQGTAAGQMHAYSADKGEALWQFEAQSG-----IVAAPMTFELAGRQYVAI  518 (560)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECSSC-----CCSCCEEEEETTEEEEEE
T ss_pred             CCEEEEECCCCcEEEEECCCCcEeEEEECCCC-----ccccCEEEEECCEEEEEE
Confidence            46777788999999999999999988876521     1112244455775 4444

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.61  E-value=1.5  Score=25.11  Aligned_cols=68  Identities=18%  Similarity=0.148  Sum_probs=45.6

Q ss_pred             CCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEE
Q psy17133          5 GTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRF   79 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~   79 (116)
                      +-+-++..++ .-..+..-...|.+++||++++..+..-+-.      ...+...+-..+..-++....+|.|..
T Consensus       256 DFPvamqvs~-kygiiyviTK~G~i~lyDleTgt~i~~nRIs------~~~iF~~a~~~~~~Gi~~VNr~GqVl~  323 (327)
T d1utca2         256 DFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRIS------GETIFVTAPHEATAGIIGVNRKGQVLS  323 (327)
T ss_dssp             CCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred             CcEEEEEeec-cCCEEEEEecCcEEEEEEcccccEEEEeecC------CCceEEeccCCCCceEEEECCCCeEEE
Confidence            3455677776 5567777788999999999999987766654      345554444444445655556666543

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=82.56  E-value=2.9  Score=23.92  Aligned_cols=62  Identities=8%  Similarity=0.155  Sum_probs=36.3

Q ss_pred             CCceEEEEccCCCcEE-EEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcC-CCCEEEEE
Q psy17133          5 GTPTSIDFVRDESTKM-VTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHP-TLPLTITA   71 (116)
Q Consensus         5 ~~v~~~~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~   71 (116)
                      .....++++| +++.+ ++-+..++|++|++...+.+.......-    .+.+--+.+.+ ++.+.+.+
T Consensus       206 ~~pNGI~~s~-d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l----~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         206 DFANGINISP-DGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF----DTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             SSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC----SSEEEEEEECTTTCCEEEEE
T ss_pred             CccceeEECC-CCCEEEEEeCCCCeEEEEEeCCCcccceEEEecC----CCCCCccEEecCCCEEEEEE
Confidence            3467899999 55555 4445688899998864432222111100    24566777776 45555554

>d2ebsa1 b.69.13.1 (A:4-430) Oligoxyloglucan reducing end-specific cellobiohydrolase {Yeast (Geotrichum sp. M128) [TaxId: 203496]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Oligoxyloglucan reducing end-specific cellobiohydrolase
family: Oligoxyloglucan reducing end-specific cellobiohydrolase
domain: Oligoxyloglucan reducing end-specific cellobiohydrolase
species: Yeast (Geotrichum sp. M128) [TaxId: 203496]

Probab=82.19  E-value=3.1  Score=24.12  Aligned_cols=68  Identities=12%  Similarity=0.001  Sum_probs=39.4

Q ss_pred             CCCCceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecC-CcCcCCCCceeEEEEcCCC-CEEEEE
Q psy17133          3 YNGTPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSS-QFGVSGGGGINRVVCHPTL-PLTITA   71 (116)
Q Consensus         3 ~~~~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~-~~~~~~   71 (116)
                      -.+.+.+++++|.+.+.+.++...+-|+.-. ..++.-..+... .........+.+++++|.. ..++.+
T Consensus        10 ~gg~~~~i~~~P~~~~~~ya~~~~gGv~~S~-dgG~tW~~~~~~~~~~~~~~~~~~~iavdp~np~~vy~~   79 (427)
T d2ebsa1          10 GGGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLA   79 (427)
T ss_dssp             BCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEE
T ss_pred             CCCcEEEEEECCCCCCEEEEEecCCCEEEEE-CCCCceEECCCCCCCCCcccccEeEEEECCCCCCEEEEE
Confidence            3578999999998888888888766665433 234433322111 0000012357889999874 344443

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.02  E-value=4  Score=23.92  Aligned_cols=97  Identities=7%  Similarity=0.007  Sum_probs=61.0

Q ss_pred             CceEEEEccCCCcEEEEeeCCCeEEEEECCCCceeEEEecCCcCcCCCCceeEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy17133          6 TPTSIDFVRDESTKMVTAFDNSACVLFDLETGKPVVRIDSSQFGVSGGGGINRVVCHPTLPLTITAHDDRHIRFFDNVSG   85 (116)
Q Consensus         6 ~v~~~~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~i~~~~~~~~   85 (116)
                      .|..++|+.   +.++.. .++.+..++..+-........-      ...+..+.+.|.  .++....++.+.++++..+
T Consensus        88 ~v~~vafs~---d~l~v~-~~~~l~~~~~~~l~~~~~~~~~------~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~  155 (381)
T d1xipa_          88 DVIFVCFHG---DQVLVS-TRNALYSLDLEELSEFRTVTSF------EKPVFQLKNVNN--TLVILNSVNDLSALDLRTK  155 (381)
T ss_dssp             TEEEEEEET---TEEEEE-ESSEEEEEESSSTTCEEEEEEC------SSCEEEEEECSS--EEEEEETTSEEEEEETTTC
T ss_pred             CeEEEEeeC---CEEEEE-eCCCEEEEEeeccccccccccc------cccccceecCCc--eeEEEecCCCEEEEEeccC
Confidence            467788865   234443 3456777777654333332222      235677776664  4666677899999999877


Q ss_pred             eEEEEee-----cccccEEEEEECCCCcEEEeee
Q psy17133         86 KLVHSMV-----AHLDAVTSLAVDPQGLYILSGT  114 (116)
Q Consensus        86 ~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~s  114 (116)
                      +......     .-.+.+.+++|++.|+.++++.
T Consensus       156 ~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         156 STKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             CEEEEEESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             ccccccCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            6443321     1235688899999999888764