Psyllid ID: psy17268
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 293 | ||||||
| 307195519 | 340 | Seipin [Harpegnathos saltator] | 0.935 | 0.805 | 0.536 | 2e-84 | |
| 345485428 | 343 | PREDICTED: seipin-like [Nasonia vitripen | 0.901 | 0.769 | 0.537 | 9e-82 | |
| 328788868 | 333 | PREDICTED: seipin-like isoform 1 [Apis m | 0.846 | 0.744 | 0.568 | 2e-81 | |
| 380026282 | 333 | PREDICTED: seipin-like [Apis florea] | 0.720 | 0.633 | 0.649 | 7e-81 | |
| 322796920 | 336 | hypothetical protein SINV_04879 [Solenop | 0.897 | 0.782 | 0.543 | 2e-80 | |
| 383853550 | 329 | PREDICTED: seipin-like [Megachile rotund | 0.962 | 0.857 | 0.501 | 7e-78 | |
| 332016272 | 332 | Seipin [Acromyrmex echinatior] | 0.870 | 0.768 | 0.545 | 2e-76 | |
| 350427370 | 334 | PREDICTED: seipin-like [Bombus impatiens | 0.709 | 0.622 | 0.639 | 2e-76 | |
| 340710543 | 335 | PREDICTED: seipin-like [Bombus terrestri | 0.709 | 0.620 | 0.634 | 8e-76 | |
| 332375056 | 336 | unknown [Dendroctonus ponderosae] | 0.976 | 0.851 | 0.476 | 1e-75 |
| >gi|307195519|gb|EFN77405.1| Seipin [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 207/274 (75%)
Query: 9 INRRTELLKQRSIKELQNVWEKIFHSSMLVLLSASVLWISIFLYIAFYYTYIPNISHVRP 68
+NR+ +++++ + +Q+ + I +++V+ + ++W+S+FLY AFYYTY+P++S+VRP
Sbjct: 10 VNRKWFAVRKKTTQNVQSARDAIVRGAIIVVCAIFIIWLSVFLYTAFYYTYMPSMSYVRP 69
Query: 69 VHLKFNACDEQKGVCSYPTAHVQLTKRHQLLMVGQPYKILMHLEMPESPTNIELGMFMVC 128
VHL+F +CDEQKG+CS+P+AHVQLT + QLLM+GQPYK+ +HLEMPESPTN ELGMFMVC
Sbjct: 70 VHLQFKSCDEQKGICSFPSAHVQLTNKQQLLMIGQPYKVNLHLEMPESPTNKELGMFMVC 129
Query: 129 AQLKDKTGDLISHSCRSAMLHYRSSLLITLKTLVQAPFLILGGYEEKQTLTLELFSEYEE 188
AQL+ + G L+ HSCRSAMLHYRS+LL TL TL +P +I G EEKQ + LELF +EE
Sbjct: 130 AQLRSRDGFLVDHSCRSAMLHYRSTLLHTLTTLTFSPMMIFGNVEEKQDVVLELFGNFEE 189
Query: 189 DQNHPVTDIYIEVQSRFIHIYSASIHINAALSGLRYVMFTWPLLSAVLGISSNLIFIVFI 248
DQ+HPVT IYI++QSR I YSAS+ INA L+GLRY+MF WP+LSA++GI +NL FI +
Sbjct: 190 DQSHPVTIIYIQIQSRHIEFYSASLMINAHLTGLRYLMFHWPILSAIVGIGTNLFFIALV 249
Query: 249 CAVSWWQLYGPKEDLRSLFFYGRLRSLATSDEES 282
C +S+ +E+ F Y + + D ++
Sbjct: 250 CTLSYLHFVVDEENTDENFSYEKGETEDEKDNKT 283
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Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345485428|ref|XP_003425269.1| PREDICTED: seipin-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|328788868|ref|XP_394330.4| PREDICTED: seipin-like isoform 1 [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|380026282|ref|XP_003696881.1| PREDICTED: seipin-like [Apis florea] | Back alignment and taxonomy information |
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| >gi|322796920|gb|EFZ19272.1| hypothetical protein SINV_04879 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|383853550|ref|XP_003702285.1| PREDICTED: seipin-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|332016272|gb|EGI57185.1| Seipin [Acromyrmex echinatior] | Back alignment and taxonomy information |
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| >gi|350427370|ref|XP_003494735.1| PREDICTED: seipin-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|340710543|ref|XP_003393847.1| PREDICTED: seipin-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|332375056|gb|AEE62669.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 293 | ||||||
| FB|FBgn0040336 | 370 | Seipin "Seipin" [Drosophila me | 0.938 | 0.743 | 0.432 | 9.7e-64 | |
| RGD|1308135 | 377 | Bscl2 "Berardinelli-Seip conge | 0.716 | 0.557 | 0.448 | 2.6e-47 | |
| UNIPROTKB|Q96G97 | 398 | BSCL2 "Seipin" [Homo sapiens ( | 0.716 | 0.527 | 0.443 | 5.4e-47 | |
| MGI|MGI:1298392 | 383 | Bscl2 "Bernardinelli-Seip cong | 0.716 | 0.548 | 0.439 | 1.4e-46 | |
| ZFIN|ZDB-GENE-051113-140 | 441 | bscl2 "Bernardinelli-Seip cong | 0.808 | 0.537 | 0.420 | 1.8e-46 | |
| UNIPROTKB|Q2KJD5 | 396 | BSCL2 "Seipin" [Bos taurus (ta | 0.716 | 0.530 | 0.443 | 2.3e-46 | |
| UNIPROTKB|Q5E9P6 | 394 | BSCL2 "Seipin" [Bos taurus (ta | 0.716 | 0.532 | 0.443 | 2.3e-46 | |
| ZFIN|ZDB-GENE-050320-130 | 392 | zgc:110829 "zgc:110829" [Danio | 0.716 | 0.535 | 0.437 | 1e-45 | |
| UNIPROTKB|I3LC49 | 463 | BSCL2 "Uncharacterized protein | 0.713 | 0.451 | 0.439 | 9.1e-45 | |
| UNIPROTKB|F8W7Q8 | 223 | BSCL2 "Seipin" [Homo sapiens ( | 0.604 | 0.793 | 0.464 | 5.3e-40 |
| FB|FBgn0040336 Seipin "Seipin" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 121/280 (43%), Positives = 186/280 (66%)
Query: 16 LKQRSIKELQNVWEKIFHXXXXXXXXXXXXWISIFLYIAFYYTYIPNISHVRPVHLKFNA 75
++ ++ +++ V E + W+++F+Y AFYY Y+P ISH RPVH++F
Sbjct: 37 VRSKADEKVGTVRELVLRLGLIAFAVVLIIWLAVFMYAAFYYVYMPAISHTRPVHMQFKT 96
Query: 76 CDEQKGVCSYPTAHVQLTKRHQLLMVGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKT 135
C E C++P AHV LTK+ QLLMVGQ YK++++++MPESP N+ELGMFMVCA+++D
Sbjct: 97 CLETSTPCTFPHAHVSLTKKQQLLMVGQAYKVIVNIDMPESPQNLELGMFMVCAEMRDYD 156
Query: 136 GDLISHSCRSAMLHYRSSLLITLKTLVQAPFLILGGYEEKQTLTLELFSEYEEDQNHPVT 195
L HSCRSAM+ YRS L+ + T V +P +LG EE Q + +E+FS Y E++ HP+T
Sbjct: 157 SMLRGHSCRSAMMRYRSPLIRMISTWVLSPLYVLGWKEEFQQVPVEIFSRYLEERQHPIT 216
Query: 196 DIYIEVQSRFIHIYSASIHINAALSGLRYVMFTWPLLSAVLGISSNLIFIVFICAVSWWQ 255
D+Y+E+QS+ I Y+ ++HI A +GLRY+MF WP+LSA++ IS+NL FI+ + +SW+
Sbjct: 217 DVYVEIQSQKIQFYTVTLHIVADFTGLRYIMFNWPVLSAIVAISTNLFFILVVFLLSWYH 276
Query: 256 LYGPKEDLRSLFF-YGRL-RSLATS--DEESFFYKEDDDN 291
+ + L S+ Y RL +SL ++ ++DDD+
Sbjct: 277 -WSDAKWLHSVQIKYARLTKSLEPGVIHSKASSLRDDDDD 315
|
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| RGD|1308135 Bscl2 "Berardinelli-Seip congenital lipodystrophy 2 (seipin)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q96G97 BSCL2 "Seipin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| MGI|MGI:1298392 Bscl2 "Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-051113-140 bscl2 "Bernardinelli-Seip congenital lipodystrophy 2 (seipin)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2KJD5 BSCL2 "Seipin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5E9P6 BSCL2 "Seipin" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050320-130 zgc:110829 "zgc:110829" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LC49 BSCL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F8W7Q8 BSCL2 "Seipin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 293 | |||
| pfam06775 | 198 | pfam06775, Seipin, Putative adipose-regulatory pro | 1e-77 |
| >gnl|CDD|219170 pfam06775, Seipin, Putative adipose-regulatory protein (Seipin) | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 1e-77
Identities = 96/205 (46%), Positives = 133/205 (64%), Gaps = 11/205 (5%)
Query: 41 SASVLWISIFLYIAFYYTYIPNISHVRPVHLKFNACDEQKGVCSYPTAHVQLTKRHQLLM 100
+LW+++F Y FYY+Y+P +S RP+H + E +PTA+V L R LLM
Sbjct: 2 LLLLLWVAVFAYGLFYYSYVPTVSLERPLHFDYTTGCE------FPTANVSLDDR--LLM 53
Query: 101 VGQPYKILMHLEMPESPTNIELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLKT 160
GQPY + + LE+PESP N++LGMFMV L ++G +I+ S R AML YRS L+ T T
Sbjct: 54 PGQPYDVTVELELPESPQNLKLGMFMVRVSLLSRSGKVIASSSRPAMLKYRSPLVRTAST 113
Query: 161 LVQAPFLILGGYEEKQTLTLELFS--EYEEDQNHPVTDIYIEVQSRF-IHIYSASIHINA 217
LV +P +LG EEKQTL +E+F E+ ED P T + +E+QSR I IYSAS+ I+A
Sbjct: 114 LVFSPLYVLGYSEEKQTLRVEMFERVEFLEDSYSPTTSLRVEIQSRAGIQIYSASLTIHA 173
Query: 218 ALSGLRYVMFTWPLLSAVLGISSNL 242
L+GLRY+M+ WP+ S ++GIS
Sbjct: 174 KLTGLRYLMYNWPITSFLVGISMFW 198
|
Seipin is a protein of approximately 400 residues, in humans, which is the product of a gene homologous to the murine guanine nucleotide-binding protein (G protein) gamma-3 linked gene. This gene is implicated in the regulation of body fat distribution and insulin resistance and particularly in the auto-immune disease Berardinelli-Seip congenital lipodystrophy type 2. Seipin has no similarity with other known proteins or consensus motifs that might predict its function, but it is predicted to contain two transmembrane domains at residues 28-49 and 237-258, in human, and a third transmembrane domain might be present at residues 155-173. Seipin may also be implicated in Silver spastic paraplegia syndrome and distal hereditary motor neuropathy type V. Length = 198 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 293 | |||
| PF06775 | 199 | Seipin: Putative adipose-regulatory protein (Seipi | 100.0 | |
| KOG4200|consensus | 398 | 100.0 | ||
| KOG4200|consensus | 398 | 99.59 |
| >PF06775 Seipin: Putative adipose-regulatory protein (Seipin); InterPro: IPR009617 Seipin is a protein of approximately 400 residues in humans, which is the product of a gene homologous to the murine guanine nucleotide-binding protein (G protein) gamma-3 linked gene | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-60 Score=421.41 Aligned_cols=195 Identities=46% Similarity=0.820 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcceEEeEEEEeccCCCCCCcccCceEEEEeccccccccCCCeEEEEEEEEecCCccCc
Q psy17268 41 SASVLWISIFLYIAFYYTYIPNISHVRPVHLKFNACDEQKGVCSYPTAHVQLTKRHQLLMVGQPYKILMHLEMPESPTNI 120 (293)
Q Consensus 41 ~~~ll~vSv~~Y~~FY~~yiP~~~~~~Pv~lqy~~~~~~~~~~s~P~A~v~L~~~~~~L~~~q~YdVsv~L~lPeS~~N~ 120 (293)
+++++++|+++|++|||.|||++.+++||||||++|.+ |+|+++++++.+.+.+||+|||+|+|+||||++|+
T Consensus 2 ~~~ll~~s~~~y~~fy~~~vP~~~~~~pl~f~y~~~~~-------P~A~v~l~~~~~~l~~~q~Ydv~v~L~lP~S~~N~ 74 (199)
T PF06775_consen 2 LILLLWLSVILYGLFYYSYVPTVSHSRPLHFDYTSGRN-------PYANVSLSNKARLLPPGQPYDVSVELELPESPYNR 74 (199)
T ss_pred EEhHHHHHHHHHHhhheEEeccceEEEEEEEEecCCCC-------cEEEEEeccCccccCCCceEEEEEEEEeCCCCCcC
Confidence 35788999999999999999999999999999998743 99999999777889999999999999999999999
Q ss_pred cCcceeEEEEEecCCCCeEEEeeceeeeecCChHHHHHHHHHHhhHHhhcCCcceEEEEEeccc--cccccCCCCceEEE
Q psy17268 121 ELGMFMVCAQLKDKTGDLISHSCRSAMLHYRSSLLITLKTLVQAPFLILGGYEEKQTLTLELFS--EYEEDQNHPVTDIY 198 (293)
Q Consensus 121 ~lG~FmV~l~l~s~~g~~l~~s~Rp~ml~y~S~lvr~~~~~~~~P~~l~G~~~E~q~l~V~l~e--~~~e~~~~p~~~~~ 198 (293)
++|||||+++++|.+|+++++++||||++|+|+++|++++++++|+|++|+.+|+|+++|+|++ ++.++.+.|+++++
T Consensus 75 ~lG~Fmv~l~l~s~~~~~l~~s~Rp~~l~y~S~~i~~~~~~~~~p~~l~G~~~e~q~l~V~l~~~~~~~~~~~~~~~~~~ 154 (199)
T PF06775_consen 75 DLGMFMVSLELLSANGKVLASSSRPAMLPYRSPLIRLLRTLLFLPPYLLGWSEETQTLSVPLFERVEFREDSESPPTSAR 154 (199)
T ss_pred CCCeEEEEEEEEcCCCcEEEEEecceecccCCHHHHHHHHHHHHHHhhEecccceEEEEEEeccccccccccCCCceEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999 78889999999999
Q ss_pred EEEeccc-eeEEEEEEEEEeccchhHHHHHHhhhHHHHHHHHHHH
Q psy17268 199 IEVQSRF-IHIYSASIHINAALSGLRYVMFTWPLLSAVLGISSNL 242 (293)
Q Consensus 199 vei~sr~-iqiY~A~L~~~a~l~GlR~lmy~~pi~S~~vgi~~~~ 242 (293)
|++++|. +|||+|+|+++|+|+|+||+|||||++||++|+++||
T Consensus 155 v~i~~~~~~qiy~A~L~~~a~l~glr~~my~~pi~S~~v~~~~fw 199 (199)
T PF06775_consen 155 VEIQSRAILQIYSASLRFTARLPGLRYLMYNWPILSFFVGVSLFW 199 (199)
T ss_pred EEEccCCCcEEEEEEEEEEEEChHHHHHHHhhhhhHheeeeeeeC
Confidence 9999998 9999999999999999999999999999999998776
|
This gene is implicated in the regulation of body fat distribution and insulin resistance and particularly in the auto-immune disease Berardinelli-Seip congenital lipodystrophy type 2. Seipin has no similarity with other known proteins or consensus motifs that might predict its function, but it is predicted to contain two transmembrane domains at residues 28-49 and 237-258, in humans, and a third transmembrane domain might be present at residues 155-173. Seipin may also be implicated in Silver spastic paraplegia syndrome and distal hereditary motor neuropathy type V []. |
| >KOG4200|consensus | Back alignment and domain information |
|---|
| >KOG4200|consensus | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00