Psyllid ID: psy17459

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
Protein Sequence
MYVRLPSLGRGFDSHPGRILSRWDSVRSGNGGLSSILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLKT
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHcccccccccccccccccccEEEEEcccc
Secondary Structure Prediction (SSPRO)
cEEEccccccccccccccEEEcccccccccccHHHHHHHHHHHccccccEEEEcccccccccEEEEEcccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHcccccEccEcccccccHHHccccccccHHHHHHHHHHHHHEEEccc
Coil and Loop (DISEMBL)
myvrlpslgrgfdshpgrilsrwdsvrsgngglSSILSSfslrfrddktlavtvppvkpflkkciflnqnlyflppgynykekpnllAQETQSLACVLRILFKMatseqmrpswgsIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKmsddkvrpathcqvdltggldqvylsglpvprhgqtcgkGMAELVVIKLKT
Flexible Loop (DISEMBL)
myvrlpslgrgfdshpgrilsrwdsvrsgnGGLSSILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLpvprhgqtcgkgMAELVVIKLKT
Low Complexity Region (SEG)
MYVRLPSLGRGFDSHPGRILSRWDSVrsgngglssilssfslrfrDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSlllliltkilkMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLKT
Disordered region (IsUnstruct)
******************ILSRWDSVR*GNGGLSSILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIK***
Disordered Region (DISOPRED)
*Y*RLP*LGRGFDSHP*********************SSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQM**S**SIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLK*
Disordered Region (DISEMBL)
MYVRLPSLGRGFDSHPGRILSRWDSVRSGNGGLSSILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLKT
Disordered Region (DISPRO)
MYVRLPSLGRGFDSHPGRILSRWDSVRS***G**SILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLKT
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYVRLPSLGRGFDSHPGRILSRWDSVRSGNGGLSSILSSFSLRFRDDKTLAVTVPPVKPFLKKCIFLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVYLSGLPVPRHGQTCGKGMAELVVIKLKT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	208	2.2.26 [Sep-21-2011]
O46382	1849	Brefeldin A-inhibited gua	yes	N/A	0.423	0.047	0.568	1e-19
D4A631	1846	Brefeldin A-inhibited gua	yes	N/A	0.423	0.047	0.568	2e-19
Q9Y6D6	1849	Brefeldin A-inhibited gua	yes	N/A	0.423	0.047	0.556	9e-19
G3X9K3	1846	Brefeldin A-inhibited gua	yes	N/A	0.423	0.047	0.556	1e-18
Q7TSU1	1791	Brefeldin A-inhibited gua	no	N/A	0.423	0.049	0.590	2e-18
A2A5R2	1792	Brefeldin A-inhibited gua	no	N/A	0.423	0.049	0.590	8e-18
Q9Y6D5	1785	Brefeldin A-inhibited gua	no	N/A	0.423	0.049	0.579	2e-17

>sp|O46382|BIG1_BOVIN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos taurus GN=ARFGEF1 PE=1 SV=1

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 65/88 (73%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M T E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct: 1710 GFKGKSKPNLLKQETSSLACGLRILFRMYTDESRASAWEEVQQRLLNVCSEALSYFLTLT 1769

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWT+LLLL LTK+LK+SD++ +
Sbjct: 1770 SESHREAWTNLLLLFLTKVLKISDNRFK 1797

Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP.
Bos taurus (taxid: 9913)

>sp|D4A631|BIG1_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/88 (56%), Positives = 65/88 (73%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M T E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct: 1707 GFKGKSKPNLLKQETSSLACGLRILFRMYTDESRVSAWEEVQQRLLNVCSEALSYFLTLT 1766

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWT+LLLL LTK+LK+SD++ +
Sbjct: 1767 SESHREAWTNLLLLFLTKVLKISDNRFK 1794

Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP. Involved in vesicular trafficking. Required for the maintenance of Golgi structure; the function may be independent of its GEF activity. Required for the maturaion of integrin beta-1 in the Golgi. Involved in the establishment and persistence of cell polarity during directed cell movement in wound healing. Proposed to act as A kinase-anchoring protein (AKAP) and may mediate crosstalk between Arf and PKA pathways. Inhibits GAP activity of MYO9B probably through competetive RhoA binding. The function in the nucleus remains to be determined.

Rattus norvegicus (taxid: 10116)

>sp|Q9Y6D6|BIG1_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2

 Score = 93.6 bits (231), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 64/88 (72%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M   E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct: 1710 GFKGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCSEALSYFLTLT 1769

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWT+LLLL LTK+LK+SD++ +
Sbjct: 1770 SESHREAWTNLLLLFLTKVLKISDNRFK 1797

Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP.

Homo sapiens (taxid: 9606)

>sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 64/88 (72%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M   E    +W  ++Q+L+ V +EAL YFL+L 
Sbjct: 1707 GFKGKSKPNLLKQETSSLACGLRILFRMYMDESRVSAWEEVQQRLLNVCREALSYFLTLT 1766

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWT+LLLL LTK+LK+SD + +
Sbjct: 1767 SESHREAWTNLLLLFLTKVLKISDSRFK 1794

Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP. Involved in vesicular trafficking. Required for the maintenance of Golgi structure; the function may be independent of its GEF activity. Required for the maturaion of integrin beta-1 in the Golgi. Involved in the establishment and persistence of cell polarity during directed cell movement in wound healing. Proposed to act as A kinase-anchoring protein (AKAP) and may mediate crosstalk between Arf and PKA pathways. Inhibits GAP activity of MYO9B probably through competetive RhoA binding. The function in the nucleus remains to be determined.

Mus musculus (taxid: 10090)

>sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1

 Score = 92.0 bits (227), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 66/88 (75%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M   E  R SWG I+Q+L+ V  EAL YF+++ 
Sbjct: 1649 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWGEIQQRLLTVCSEALAYFITVN 1708

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWTSLLLL+LTK LK++D+K +
Sbjct: 1709 SESHREAWTSLLLLLLTKTLKINDEKFK 1736

Promotes guanine-nucleotide exchange on ARF1 and ARF3 and to a lower extend on ARF5 and ARF6. Promotes the activation of ARF1/ARF5/ARF6 through replacement of GDP with GTP. Involved in the regulation of Golgi vesicular transport. Required for the integrity of the endosomal compartment. Involved in trafficking from the trans-Golgi network (TGN) to endosomes and is required for membrane association of the AP-1 complex and GGA1. Seems to be involved in recycling of the transferrin receptor from recycling endosomes to the plasma membrane. Probably is involved in the exit of GABA(A) receptors from the endoplasmic reticulum. Involved in constitutive release of tumor necrosis factor receptor 1 via exosome-like vesicles; the function seems to involve PKA and specifically PRKAR2B. Proposed to act as A kinase-anchoring protein (AKAP) and may mediate crosstalk between Arf and PKA pathways.

Rattus norvegicus (taxid: 10116)

>sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/88 (59%), Positives = 65/88 (73%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M   E  R SW  I+Q+L+ V  EAL YF+++ 
Sbjct: 1649 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWDEIQQRLLRVCSEALAYFITVN 1708

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWTSLLLL+LTK LK+SD+K +
Sbjct: 1709 SESHREAWTSLLLLLLTKTLKISDEKFK 1736

Promotes guanine-nucleotide exchange on ARF1 and ARF3 and to a lower extend on ARF5 and ARF6. Promotes the activation of ARF1/ARF5/ARF6 through replacement of GDP with GTP. Involved in the regulation of Golgi vesicular transport. Required for the integrity of the endosomal compartment. Involved in trafficking from the trans-Golgi network (TGN) to endosomes and is required for membrane association of the AP-1 complex and GGA1. Seems to be involved in recycling of the transferrin receptor from recycling endosomes to the plasma membrane. Probably is involved in the exit of GABA(A) receptors from the endoplasmic reticulum. Involved in constitutive release of tumor necrosis factor receptor 1 via exosome-like vesicles; the function seems to involve PKA and specifically PRKAR2B. Proposed to act as A kinase-anchoring protein (AKAP) and may mediate crosstalk between Arf and PKA pathways.

Mus musculus (taxid: 10090)

>sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/88 (57%), Positives = 65/88 (73%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QET SLAC LRILF+M   E  R SW  I+Q+L+ V  EAL YF+++ 
Sbjct: 1642 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWEEIQQRLLTVCSEALAYFITVN 1701

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             E HR+AWTSLLLL+LTK LK++D+K +
Sbjct: 1702 SESHREAWTSLLLLLLTKTLKINDEKFK 1729

Promotes guanine-nucleotide exchange on ARF1, ARF5 and ARF6. Promotes the activation of ARF1/ARF5/ARF6 through replacement of GDP with GTP.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
242009079	1780	Brefeldin A-inhibited guanine nucleotide	0.418	0.048	0.597	1e-21
405954517	1821	Brefeldin A-inhibited guanine nucleotide	0.423	0.048	0.522	6e-20
241632444	1645	brefeldin A-inhibited guanine nucleotide	0.442	0.055	0.526	7e-20
380017271	1697	PREDICTED: brefeldin A-inhibited guanine	0.413	0.050	0.616	9e-20
383853968	1697	PREDICTED: brefeldin A-inhibited guanine	0.447	0.054	0.574	9e-20
350411439	1697	PREDICTED: brefeldin A-inhibited guanine	0.413	0.050	0.604	1e-19
340729749	1697	PREDICTED: brefeldin A-inhibited guanine	0.413	0.050	0.604	1e-19
328778549	1697	PREDICTED: brefeldin A-inhibited guanine	0.413	0.050	0.604	2e-19
291235728	1580	PREDICTED: ADP-ribosylation factor guani	0.418	0.055	0.540	4e-19
118791252	1662	AGAP008906-PA [Anopheles gambiae str. PE	0.475	0.059	0.603	5e-19

>gi|242009079|ref|XP_002425320.1| Brefeldin A-inhibited guanine nucleotide-exchange protein, putative [Pediculus humanus corporis] gi|212509094|gb|EEB12582.1| Brefeldin A-inhibited guanine nucleotide-exchange protein, putative [Pediculus humanus corporis]

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 64/87 (73%)

Query: 76   PGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSL 135
             G+    KPNLL QETQSLACVLRILFKM   E  +  W  I+ +LI V +EAL+YFL L
Sbjct: 1643 AGFKGTVKPNLLKQETQSLACVLRILFKMYCDETRQEDWMKIQCKLIAVCKEALEYFLCL 1702

Query: 136  QYEMHRDAWTSLLLLILTKILKMSDDK 162
            Q E HRDAWT +LLL+LT+I KM+D++
Sbjct: 1703 QSESHRDAWTCILLLVLTRIFKMNDER 1729

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405954517|gb|EKC21934.1| Brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Crassostrea gigas]

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 46/88 (52%), Positives = 66/88 (75%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+  K KPNLL QETQSLAC+LRILF+M   E    +W  +E  LI V +++L+YFLSLQ
Sbjct: 1692 GFRGKAKPNLLKQETQSLACLLRILFRMYNDESRMDAWKDVENMLITVCRDSLEYFLSLQ 1751

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR 164
             + HR+AW SL++L++T++LK+ DD+ +
Sbjct: 1752 SDSHREAWGSLMILLITRLLKLPDDRFK 1779

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|241632444|ref|XP_002408596.1| brefeldin A-inhibited guanine nucleotide-exchange protein, putative [Ixodes scapularis] gi|215501198|gb|EEC10692.1| brefeldin A-inhibited guanine nucleotide-exchange protein, putative [Ixodes scapularis]

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 68/95 (71%), Gaps = 3/95 (3%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QE QSLACVLRILF+M   E  + +W +++ +LIGV +EALQY+LSL 
Sbjct: 1517 GFRGNVKPNLLTQEAQSLACVLRILFRMYRDEGRQDAWHTVQDRLIGVCREALQYYLSLA 1576

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQV 171
             E HR++W SLLLL LT++ ++ D++   ATH  V
Sbjct: 1577 TESHRESWDSLLLLFLTRVQRLDDER---ATHASV 1608

Source: Ixodes scapularis

Species: Ixodes scapularis

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380017271|ref|XP_003692583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Apis florea]

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 53/86 (61%), Positives = 64/86 (74%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QETQSLAC LRILFKM + E  R  W  +E +L+ V  EALQYFL+L 
Sbjct: 1568 GFRDNIKPNLLKQETQSLACALRILFKMYSDETHRVDWSKVETRLVEVACEALQYFLTLS 1627

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDK 162
             E HRDAWT +LLL+LT+ILKMSD++
Sbjct: 1628 TEAHRDAWTPILLLLLTRILKMSDNR 1653

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383853968|ref|XP_003702494.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Megachile rotundata]

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 68/94 (72%), Gaps = 1/94 (1%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QETQSLAC LRILFKM + E  R  W  +E +L+ V  EAL+YFL+L 
Sbjct: 1568 GFRGNVKPNLLKQETQSLACALRILFKMYSDEAHRADWSKVESRLVEVACEALEYFLALS 1627

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDKVR-PATHC 169
             E HRDAWT +LLL+LT+ILKMSD++    A++C
Sbjct: 1628 NEAHRDAWTPILLLLLTRILKMSDNRFAVHASNC 1661

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411439|ref|XP_003489352.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Bombus impatiens]

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 64/86 (74%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QETQSLAC LRILFKM + E  R  W  +E +L+ V  EAL+YFL+L 
Sbjct: 1568 GFRGNVKPNLLKQETQSLACALRILFKMYSDEAHRADWSKVETRLVEVACEALEYFLALS 1627

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDK 162
             E HRDAWT +LLL+LT+ILKMSD++
Sbjct: 1628 NEAHRDAWTPILLLLLTRILKMSDNR 1653

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729749|ref|XP_003403158.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Bombus terrestris]

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 64/86 (74%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QETQSLAC LRILFKM + E  R  W  +E +L+ V  EAL+YFL+L 
Sbjct: 1568 GFRGNVKPNLLKQETQSLACALRILFKMYSDEAHRADWSKVETRLVEVACEALEYFLALS 1627

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDK 162
             E HRDAWT +LLL+LT+ILKMSD++
Sbjct: 1628 NEAHRDAWTPILLLLLTRILKMSDNR 1653

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778549|ref|XP_003249515.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Apis mellifera]

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 52/86 (60%), Positives = 64/86 (74%)

Query: 77   GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
            G+    KPNLL QETQSLAC LRILFKM + E  R  W  +E +L+ V  EALQYFL+L 
Sbjct: 1568 GFRDNIKPNLLKQETQSLACALRILFKMYSDEAHRVDWSKVETRLVEVACEALQYFLTLS 1627

Query: 137  YEMHRDAWTSLLLLILTKILKMSDDK 162
             E HRDAWT +LLL+LT+ILKM+D++
Sbjct: 1628 TEAHRDAWTPILLLLLTRILKMNDNR 1653

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|291235728|ref|XP_002737796.1| PREDICTED: ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)-like [Saccoglossus kowalevskii]

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 47/87 (54%), Positives = 62/87 (71%)

Query: 78   YNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQY 137
            +  K KPNLL QET SLAC+LRILF+M      +  W  IE +LI V +EAL+YFL L+ 
Sbjct: 1451 FKGKSKPNLLKQETNSLACLLRILFRMYMDTDRQDKWPDIEDRLISVCKEALEYFLKLES 1510

Query: 138  EMHRDAWTSLLLLILTKILKMSDDKVR 164
            E HR+AW S+LLL LTK++K+SD + +
Sbjct: 1511 ESHREAWRSILLLFLTKVIKLSDQRFK 1537

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|118791252|ref|XP_319652.3| AGAP008906-PA [Anopheles gambiae str. PEST] gi|116117509|gb|EAA14874.4| AGAP008906-PA [Anopheles gambiae str. PEST]

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 70/101 (69%), Gaps = 2/101 (1%)

Query: 68   NQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQE 127
            +Q       G+    KPNLL QETQSLACVLRILFKM + E  R  W  IE++LIGV  E
Sbjct: 1523 DQRTVLWKAGFKGSLKPNLLKQETQSLACVLRILFKMYSDENRRRDWQDIEKRLIGVCTE 1582

Query: 128  ALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATH 168
            AL YFLSL  E HRDAWTSLLLL++T++LKMSD   R A H
Sbjct: 1583 ALDYFLSLPSEPHRDAWTSLLLLVMTRLLKMSD--ARFAAH 1621

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	208
UNIPROTKB|F1RU02	1840	LOC100156861 "Uncharacterized	0.423	0.047	0.477	7.8e-18
UNIPROTKB|K7GSM4	1849	LOC100156861 "Uncharacterized	0.423	0.047	0.477	7.9e-18
ZFIN|ZDB-GENE-090312-50	1846	si:dkey-192i18.4 "si:dkey-192i	0.447	0.050	0.494	1.1e-17
FB|FBgn0028538	1653	Sec71 "Sec71 ortholog (S. cere	0.432	0.054	0.554	1.6e-17
RGD|631430	1791	Arfgef2 "ADP-ribosylation fact	0.447	0.051	0.473	7.7e-17
MGI|MGI:2139354	1792	Arfgef2 "ADP-ribosylation fact	0.423	0.049	0.488	2.6e-16
UNIPROTKB|E1BVQ3	1801	ARFGEF2 "Uncharacterized prote	0.423	0.048	0.477	2.6e-16
UNIPROTKB|H9L396	253	H9L396 "Uncharacterized protei	0.423	0.347	0.454	2.9e-16
UNIPROTKB|E1BKI9	1788	ARFGEF2 "Uncharacterized prote	0.423	0.049	0.477	4.3e-16
UNIPROTKB|Q9Y6D5	1785	ARFGEF2 "Brefeldin A-inhibited	0.423	0.049	0.477	7e-16

UNIPROTKB|F1RU02 LOC100156861 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 215 (80.7 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
 Identities = 42/88 (47%), Positives = 55/88 (62%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M T E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct:  1701 GFKGKSKPNLLKQETSSLACGLRILFRMYTDESRASAWDEVQQRLLNVCSEALSYFLTLT 1760

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWT+           +SDD+ +
Sbjct:  1761 SESHREAWTNLLLLFLTKVLKISDDRFK 1788

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|K7GSM4 LOC100156861 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 215 (80.7 bits), Expect = 7.9e-18, Sum P(2) = 7.9e-18
 Identities = 42/88 (47%), Positives = 55/88 (62%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M T E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct:  1710 GFKGKSKPNLLKQETSSLACGLRILFRMYTDESRASAWDEVQQRLLNVCSEALSYFLTLT 1769

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWT+           +SDD+ +
Sbjct:  1770 SESHREAWTNLLLLFLTKVLKISDDRFK 1797

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

ZFIN|ZDB-GENE-090312-50 si:dkey-192i18.4 "si:dkey-192i18.4" [Danio rerio (taxid:7955)]

 Score = 231 (86.4 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 46/93 (49%), Positives = 57/93 (61%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M +  Q+R SW  I+ +L+ V  EAL YF+SL 
Sbjct:  1703 GFKGKSKPNLLKQETSSLACSLRILFRMYSDTQLRDSWPDIQTRLLHVCSEALAYFISLT 1762

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVRPATHC 169
              E HR+AWTS           + DDK +P   C
Sbjct:  1763 SESHREAWTSLLLLLLTRTLRLPDDKFKPHASC 1795

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)]

 Score = 229 (85.7 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 51/92 (55%), Positives = 56/92 (60%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+    KPNLL QET SLACVLRI FKM   E  R  W  IEQ+L+ V +EAL Y+LSLQ
Sbjct:  1523 GFKGSVKPNLLKQETSSLACVLRIFFKMYGDENRRSDWPGIEQELVQVCKEALGYYLSLQ 1582

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVRPATH 168
              E HRDAWTS           MSD   R ATH
Sbjct:  1583 SEAHRDAWTSLLLLILTRLLKMSD--ARFATH 1612

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=ISS;IBA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=ISS

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

RGD|631430 Arfgef2 "ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)" [Rattus norvegicus (taxid:10116)]

 Score = 223 (83.6 bits), Expect = 7.7e-17, P = 7.7e-17
 Identities = 45/95 (47%), Positives = 58/95 (61%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E  R SWG I+Q+L+ V  EAL YF+++ 
Sbjct:  1649 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWGEIQQRLLTVCSEALAYFITVN 1708

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVRPATHCQV 171
              E HR+AWTS           ++D+K +   H  V
Sbjct:  1709 SESHREAWTSLLLLLLTKTLKINDEKFK--AHASV 1741

GO:0000139 "Golgi membrane" evidence=ISO;ISS

GO:0001881 "receptor recycling" evidence=ISO;ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISO;TAS

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=ISO;ISS;IBA

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0005815 "microtubule organizing center" evidence=ISO;ISS

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0005879 "axonemal microtubule" evidence=IDA

GO:0006887 "exocytosis" evidence=IMP

GO:0006893 "Golgi to plasma membrane transport" evidence=ISO;ISS

GO:0007032 "endosome organization" evidence=ISO;ISS

GO:0010256 "endomembrane system organization" evidence=ISO;ISS

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=ISO

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0017022 "myosin binding" evidence=IPI

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IDA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0032279 "asymmetric synapse" evidence=IDA

GO:0032280 "symmetric synapse" evidence=IDA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=ISO;ISS

GO:0034237 "protein kinase A regulatory subunit binding" evidence=ISO;ISS

GO:0035556 "intracellular signal transduction" evidence=IEA;ISO

GO:0043197 "dendritic spine" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0050811 "GABA receptor binding" evidence=IMP

GO:0055037 "recycling endosome" evidence=ISO;ISS

MGI|MGI:2139354 Arfgef2 "ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)" [Mus musculus (taxid:10090)]

 Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 43/88 (48%), Positives = 55/88 (62%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E  R SW  I+Q+L+ V  EAL YF+++ 
Sbjct:  1649 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWDEIQQRLLRVCSEALAYFITVN 1708

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWTS           +SD+K +
Sbjct:  1709 SESHREAWTSLLLLLLTKTLKISDEKFK 1736

GO:0000139 "Golgi membrane" evidence=ISO

GO:0001881 "receptor recycling" evidence=ISO

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=ISO

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=ISO;IBA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=ISO;IBA

GO:0005815 "microtubule organizing center" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005879 "axonemal microtubule" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006887 "exocytosis" evidence=ISO

GO:0006893 "Golgi to plasma membrane transport" evidence=ISO

GO:0007032 "endosome organization" evidence=ISO

GO:0010256 "endomembrane system organization" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=ISO

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0017022 "myosin binding" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0032279 "asymmetric synapse" evidence=ISO

GO:0032280 "symmetric synapse" evidence=ISO

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=ISO

GO:0034237 "protein kinase A regulatory subunit binding" evidence=ISO

GO:0035556 "intracellular signal transduction" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043197 "dendritic spine" evidence=ISO

GO:0045202 "synapse" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=ISO

GO:0050811 "GABA receptor binding" evidence=ISO

GO:0055037 "recycling endosome" evidence=ISO

UNIPROTKB|E1BVQ3 ARFGEF2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 218 (81.8 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 42/88 (47%), Positives = 56/88 (63%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E  R SW +I+Q+L+ V  EAL YF+++ 
Sbjct:  1658 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWDAIQQRLLSVCSEALAYFITVN 1717

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWT+           +SD+K +
Sbjct:  1718 SESHREAWTNLLLLLLTKTLKISDEKFK 1745

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0001881 "receptor recycling" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006893 "Golgi to plasma membrane transport" evidence=IEA

GO:0007032 "endosome organization" evidence=IEA

GO:0010256 "endomembrane system organization" evidence=IEA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=IEA

GO:0034237 "protein kinase A regulatory subunit binding" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0055037 "recycling endosome" evidence=IEA

UNIPROTKB|H9L396 H9L396 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 40/88 (45%), Positives = 54/88 (61%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E    +W  ++Q+L+ V  EAL YFL+L 
Sbjct:   114 GFKGKSKPNLLKQETSSLACGLRILFRMYMDESRISAWEEVQQRLLNVCSEALSYFLTLT 173

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWT+           +SD++ +
Sbjct:   174 SESHREAWTNLLLLFLTKVLKISDERFK 201

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007030 "Golgi organization" evidence=IEA

GO:0010256 "endomembrane system organization" evidence=IEA

GO:0017022 "myosin binding" evidence=IEA

GO:0030532 "small nuclear ribonucleoprotein complex" evidence=IEA

GO:0030837 "negative regulation of actin filament polymerization" evidence=IEA

GO:0034237 "protein kinase A regulatory subunit binding" evidence=IEA

GO:0034259 "negative regulation of Rho GTPase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0090284 "positive regulation of protein glycosylation in Golgi" evidence=IEA

GO:0090303 "positive regulation of wound healing" evidence=IEA

GO:2000114 "regulation of establishment of cell polarity" evidence=IEA

UNIPROTKB|E1BKI9 ARFGEF2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 216 (81.1 bits), Expect = 4.3e-16, P = 4.3e-16
 Identities = 42/88 (47%), Positives = 55/88 (62%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E  R SW  I+Q+L+ V  EAL YF+++ 
Sbjct:  1645 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWEEIQQRLLSVCSEALAYFITVN 1704

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWTS           ++D+K +
Sbjct:  1705 SESHREAWTSLLLLLLTKTLKINDEKFK 1732

GO:0055037 "recycling endosome" evidence=IEA

GO:0035556 "intracellular signal transduction" evidence=IEA

GO:0034237 "protein kinase A regulatory subunit binding" evidence=IEA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=IEA

GO:0010256 "endomembrane system organization" evidence=IEA

GO:0007032 "endosome organization" evidence=IEA

GO:0006893 "Golgi to plasma membrane transport" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0001881 "receptor recycling" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|Q9Y6D5 ARFGEF2 "Brefeldin A-inhibited guanine nucleotide-exchange protein 2" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 7.0e-16, P = 7.0e-16
 Identities = 42/88 (47%), Positives = 55/88 (62%)

Query:    77 GYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGSIEQQLIGVNQEALQYFLSLQ 136
             G+  K KPNLL QET SLAC LRILF+M   E  R SW  I+Q+L+ V  EAL YF+++ 
Sbjct:  1642 GFKGKSKPNLLKQETSSLACCLRILFRMYVDENRRDSWEEIQQRLLTVCSEALAYFITVN 1701

Query:   137 YEMHRDAWTSXXXXXXXXXXXMSDDKVR 164
              E HR+AWTS           ++D+K +
Sbjct:  1702 SESHREAWTSLLLLLLTKTLKINDEKFK 1729

GO:0032012 "regulation of ARF protein signal transduction" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0006887 "exocytosis" evidence=IEA

GO:0017022 "myosin binding" evidence=IEA

GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IDA;IBA

GO:0005802 "trans-Golgi network" evidence=ISS;IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0055037 "recycling endosome" evidence=IDA

GO:0034237 "protein kinase A regulatory subunit binding" evidence=IDA

GO:0005815 "microtubule organizing center" evidence=IDA

GO:0001881 "receptor recycling" evidence=IDA

GO:0032760 "positive regulation of tumor necrosis factor production" evidence=IMP

GO:0006893 "Golgi to plasma membrane transport" evidence=IMP

GO:0007032 "endosome organization" evidence=IMP

GO:0010256 "endomembrane system organization" evidence=IMP

GO:0050811 "GABA receptor binding" evidence=ISS

GO:0005879 "axonemal microtubule" evidence=ISS

GO:0031410 "cytoplasmic vesicle" evidence=ISS

GO:0032279 "asymmetric synapse" evidence=ISS

GO:0032280 "symmetric synapse" evidence=ISS

GO:0043197 "dendritic spine" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0035556 "intracellular signal transduction" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O46382	BIG1_BOVIN	No assigned EC number	0.5681	0.4230	0.0475	yes	N/A
D4A631	BIG1_RAT	No assigned EC number	0.5681	0.4230	0.0476	yes	N/A
G3X9K3	BIG1_MOUSE	No assigned EC number	0.5568	0.4230	0.0476	yes	N/A
Q9Y6D6	BIG1_HUMAN	No assigned EC number	0.5568	0.4230	0.0475	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	208
PLN03076	1780	ARF guanine nucleotide exchange factor (ARF-GEF);	99.97
KOG0929|consensus	1514		99.86

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional

Probab=99.97  E-value=2.8e-31  Score=277.47  Aligned_cols=128  Identities=18%  Similarity=0.177  Sum_probs=117.9

Q ss_pred             EEEeCCchhhhhhh--------------hccchhhccccCcccCCCC--CchhHhhhhHHHHHHHHHHHhhcCCCCCCCH
Q psy17459         51 AVTVPPVKPFLKKC--------------IFLNQNLYFLPPGYNYKEK--PNLLAQETQSLACVLRILFKMATSEQMRPSW  114 (208)
Q Consensus        51 ~~~~~p~~~~l~~c--------------~d~eLRt~LWkAGFmgkq~--PNLLKQETsSaA~~L~ILFRMY~De~r~d~~  114 (208)
                      +-++|+ +-+++++              .|++||++|||+||| +++  ||||||||+|+|||++||||||+|++....|
T Consensus      1587 ~~~l~~-~~l~~l~~~L~~s~~fA~~fN~d~~lR~~l~~~g~~-~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~~~~~ 1664 (1780)
T PLN03076       1587 RPRLSA-KNTLVLFDALHTVASHAHKINSDTALRSKLQELGSM-TQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKE 1664 (1780)
T ss_pred             HhhCCH-HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhc-ccCCCCchhhHhHHHHHHHHHHHHHHhcCCCccchH
Confidence            356777 8888776              699999999999999 775  9999999999999999999999999987799


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCC--------------------cc-cc--chhhHHHHHHHHHhhcCCchhhhccccccc
Q psy17459        115 GSIEQQLIGVNQEALQYFLSLQY--------------------EM-HR--DAWTSLLLLILTKILKMSDDKVRPATHCQV  171 (208)
Q Consensus       115 ~eIe~rLiplc~diL~~Y~sLd~--------------------Es-hR--~AWtPVVveIL~g~~~L~De~F~~h~~~fY  171 (208)
                      ++|+++|+|+|.+|+++|+++++                    ++ +|  +||+|||++||+|+++|||++|++|+++||
T Consensus      1665 ~~~~~~l~~~c~~il~~y~~l~~~~~~~~~~~~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y 1744 (1780)
T PLN03076       1665 AEVESRLVELCEEVLQFYIETSTAGQDSEDSSSQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFF 1744 (1780)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            99999999999999999999988                    44 34  799999999999999999999999999999


Q ss_pred             hhhhhhhhh
Q psy17459        172 DLTGGLDQV  180 (208)
Q Consensus       172 ~Lv~~LL~~  180 (208)
                      |++|+|+..
T Consensus      1745 ~l~~~l~~~ 1753 (1780)
T PLN03076       1745 PLLAGLISC 1753 (1780)
T ss_pred             HHHHHHHhc
Confidence            999999986

>KOG0929|consensus

Probab=99.86  E-value=1.4e-22  Score=209.39  Aligned_cols=115  Identities=32%  Similarity=0.431  Sum_probs=104.8

Q ss_pred             EEEeCCchhhhhhhh--------------ccchhhccccCcccCCCCCchhHhhhhHHHHHHHHHHHhhcCCCCCCCHHH
Q psy17459         51 AVTVPPVKPFLKKCI--------------FLNQNLYFLPPGYNYKEKPNLLAQETQSLACVLRILFKMATSEQMRPSWGS  116 (208)
Q Consensus        51 ~~~~~p~~~~l~~c~--------------d~eLRt~LWkAGFmgkq~PNLLKQETsSaA~~L~ILFRMY~De~r~d~~~e  116 (208)
                      +-++|+ +-+++||+              |++||++||+||++ +++||||||||+|++||++||||||.|+++..  ++
T Consensus      1369 ~~~l~~-~~~~~l~d~l~~s~~fa~~fN~d~~lR~~l~~~~~~-~~~pnLL~qE~~s~~~~l~~lf~~~~~~~~~~--~~ 1444 (1514)
T KOG0929|consen 1369 YTSLSA-QHLLKLLDILSESHEFAKQFNSDYELRTKLWRAGKG-SQKPNLLRQETSSLACYLDILFRLLKDDPRVS--EE 1444 (1514)
T ss_pred             HhhCCH-HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHhccc-CCCcchhhHHHHHHHHHHHHHHHHhccCcccc--HH
Confidence            445666 88888874              89999999999966 99999999999999999999999999999876  99


Q ss_pred             HHHHHHHHHHHHHHhhhccCCccccchhhHHHHHHHHHhhcCCchhhhccccccchhhhhhhhhh
Q psy17459        117 IEQQLIGVNQEALQYFLSLQYEMHRDAWTSLLLLILTKILKMSDDKVRPATHCQVDLTGGLDQVY  181 (208)
Q Consensus       117 Ie~rLiplc~diL~~Y~sLd~EshR~AWtPVVveIL~g~~~L~De~F~~h~~~fY~Lv~~LL~~y  181 (208)
                      |++||+++|.+|+++|.++++|+| +||       ++.    ++++|++|+|.||+++|++++.-
T Consensus      1445 i~~~l~~~c~~~l~~y~~~~~~~~-~a~-------~~~----~~~~~~~~~~~~~~~l~~~~~~~ 1497 (1514)
T KOG0929|consen 1445 IESRLVTVCSEVLKGYLSLTSETH-EAW-------LTP----SDEEFSARAPLYYALLCAMCAFD 1497 (1514)
T ss_pred             HHHHHHHHHHHHHHHHHhccccch-hhh-------cCC----cHHHHhccCchHHHHHHHHHHcC
Confidence            999999999999999999999999 999       333    99999999999999999998754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00