Psyllid ID: psy17864


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-
MNSVFNEHPSRRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQINGGSLSS
ccccccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccc
ccccccccccccccHHHHHHHHHHHHHHcccccEcccccccHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccEccccHHHHHHHHHHHHHHccccccc
mnsvfnehpsrrisdDFIEKAVAEARASFKVSFKFqvnsglnldVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYsnraldddMRSQMALDWIAREqenpgalgRELDQAERELETARLAgrelrfpkeKKDILMLAHTqinggslss
mnsvfnehpsrrisddFIEKAVAEARASFKVsfkfqvnsglnldvtstiGKKLATYWNGSLKAMRERQCSRQEVVAHysnraldddmRSQMALDWIAREQENPGALGRELDQAERELETarlagrelrfpkekkdiLMLAhtqinggslss
MNSVFNEHPSRRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQINGGSLSS
****************FIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYS*************LDWI*******************************************************
**SVFN*HPSRRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIA*****************RELE**RLAGRELRFPKEKKDILMLAHTQ********
**********RRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKA********QEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQINGGSLSS
*******H*SRRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQIN******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNSVFNEHPSRRISDDFIEKAVAEARASFKVSFKFQVNSGLNLDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQINGGSLSS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query151 2.2.26 [Sep-21-2011]
Q5PQQ7338 LIX1-like protein OS=Ratt yes N/A 0.947 0.423 0.607 2e-47
Q8BQ89337 LIX1-like protein OS=Mus yes N/A 0.947 0.424 0.607 3e-47
Q8IVB5337 LIX1-like protein OS=Homo yes N/A 0.947 0.424 0.601 1e-46
Q8UVV7281 Protein limb expression 1 yes N/A 1.0 0.537 0.461 1e-33
Q6P566282 Protein limb expression 1 no N/A 0.940 0.503 0.493 2e-33
Q8N485282 Protein limb expression 1 no N/A 0.940 0.503 0.487 5e-33
>sp|Q5PQQ7|LIX1L_RAT LIX1-like protein OS=Rattus norvegicus GN=Lix1l PE=2 SV=1 Back     alignment and function desciption
 Score =  187 bits (474), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/163 (60%), Positives = 117/163 (71%), Gaps = 20/163 (12%)

Query: 1   MNSVFNEHPSRRISDDFIEKAVAEARASFKV-------------SFKFQVNSG-----LN 42
           MNSVFNEHPSRRI+D+FIEK+V+EA ASF               +F+F + S      L 
Sbjct: 171 MNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEADNPNTGIGAFRFMLESNKGKSMLE 230

Query: 43  LDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQEN 102
                T+ + L  +WNGSLKAMRERQCSRQEV+AHYS+RALDDD+R QMALDW++REQ  
Sbjct: 231 FQELMTVFQLL--HWNGSLKAMRERQCSRQEVLAHYSHRALDDDIRHQMALDWVSREQSV 288

Query: 103 PGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQIN 145
           PGAL REL   EREL+ ARLAG+ELRF KEKKDILMLA  Q+ 
Sbjct: 289 PGALSRELASTERELDEARLAGKELRFHKEKKDILMLAAGQLG 331





Rattus norvegicus (taxid: 10116)
>sp|Q8BQ89|LIX1L_MOUSE LIX1-like protein OS=Mus musculus GN=Lix1l PE=2 SV=2 Back     alignment and function description
>sp|Q8IVB5|LIX1L_HUMAN LIX1-like protein OS=Homo sapiens GN=LIX1L PE=2 SV=1 Back     alignment and function description
>sp|Q8UVV7|LIX1_CHICK Protein limb expression 1 OS=Gallus gallus GN=LIX1 PE=2 SV=1 Back     alignment and function description
>sp|Q6P566|LIX1_MOUSE Protein limb expression 1 homolog OS=Mus musculus GN=Lix1 PE=2 SV=1 Back     alignment and function description
>sp|Q8N485|LIX1_HUMAN Protein limb expression 1 homolog OS=Homo sapiens GN=LIX1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query151
242015504246 conserved hypothetical protein [Pediculu 0.953 0.585 0.713 4e-56
91095051 325 PREDICTED: similar to conserved hypothet 0.947 0.44 0.711 4e-55
270014769 262 hypothetical protein TcasGA2_TC005181 [T 0.947 0.545 0.711 4e-55
157124217 265 hypothetical protein AaeL_AAEL001809 [Ae 0.966 0.550 0.686 2e-54
195051135 268 GH13606 [Drosophila grimshawi] gi|193900 0.986 0.555 0.662 4e-54
195384920 268 GJ13753 [Drosophila virilis] gi|19414761 0.986 0.555 0.662 4e-54
158299716 271 AGAP009016-PA [Anopheles gambiae str. PE 0.966 0.538 0.676 8e-54
312373463 266 hypothetical protein AND_17408 [Anophele 0.966 0.548 0.676 1e-53
170049604 265 conserved hypothetical protein [Culex qu 0.966 0.550 0.680 2e-53
321475874 258 hypothetical protein DAPPUDRAFT_22257 [D 0.940 0.550 0.679 1e-52
>gi|242015504|ref|XP_002428393.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513005|gb|EEB15655.1| conserved hypothetical protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  222 bits (565), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/164 (71%), Positives = 124/164 (75%), Gaps = 20/164 (12%)

Query: 1   MNSVFNEHPSRRISDDFIEKAVAEARASFK---------------VSFKFQVNSG---LN 42
           MNSVFNEHPSR+ISDDFIEKAVAEARASFK                 F  + N G   L 
Sbjct: 81  MNSVFNEHPSRKISDDFIEKAVAEARASFKGNPSEADNPNTGVGAFRFMLEANKGRTMLE 140

Query: 43  LDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQEN 102
                T+ + L  +WNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIARE EN
Sbjct: 141 FQELMTVFQLL--HWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREHEN 198

Query: 103 PGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQING 146
            GALG+EL  AERELETARLAGRELRFPKEKKDILMLAH Q+ G
Sbjct: 199 VGALGKELSLAERELETARLAGRELRFPKEKKDILMLAHNQVVG 242




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91095051|ref|XP_972203.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270014769|gb|EFA11217.1| hypothetical protein TcasGA2_TC005181 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157124217|ref|XP_001660369.1| hypothetical protein AaeL_AAEL001809 [Aedes aegypti] gi|108882804|gb|EAT47029.1| AAEL001809-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|195051135|ref|XP_001993040.1| GH13606 [Drosophila grimshawi] gi|193900099|gb|EDV98965.1| GH13606 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|195384920|ref|XP_002051160.1| GJ13753 [Drosophila virilis] gi|194147617|gb|EDW63315.1| GJ13753 [Drosophila virilis] Back     alignment and taxonomy information
>gi|158299716|ref|XP_319761.3| AGAP009016-PA [Anopheles gambiae str. PEST] gi|157013651|gb|EAA14824.3| AGAP009016-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|312373463|gb|EFR21202.1| hypothetical protein AND_17408 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|170049604|ref|XP_001857706.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167871373|gb|EDS34756.1| conserved hypothetical protein [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|321475874|gb|EFX86835.1| hypothetical protein DAPPUDRAFT_22257 [Daphnia pulex] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query151
FB|FBgn0032230268 lft "lowfat" [Drosophila melan 0.986 0.555 0.639 6e-48
MGI|MGI:3036267337 Lix1l "Lix1-like" [Mus musculu 0.986 0.442 0.603 1.9e-42
RGD|1593161338 Lix1l "Lix1 homolog (mouse)-li 0.986 0.440 0.603 1.9e-42
UNIPROTKB|A2VE91337 LIX1L "Uncharacterized protein 0.973 0.436 0.603 2.5e-42
UNIPROTKB|Q8IVB5337 LIX1L "LIX1-like protein" [Hom 0.973 0.436 0.597 6.6e-42
MGI|MGI:1913893282 Lix1 "limb expression 1 homolo 0.953 0.510 0.493 6.2e-30
FB|FBgn0032230 lft "lowfat" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 108/169 (63%), Positives = 126/169 (74%)

Query:     1 MNSVFNEHPSRRISDDFIEKAVAEARASFKVS-------------FKF--QVNSG---LN 42
             MNSVFNEHPSRRISD+FI+KAV +AR SFK +             F+F  + N G   L 
Sbjct:    97 MNSVFNEHPSRRISDEFIQKAVQDARTSFKGTSQINEGTESGIGAFRFMLEANKGRTMLE 156

Query:    43 LDVTSTIGKKLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQEN 102
                  T+ + L  +WNGSLKAMRER CSRQEVVAHYSNR+LDD+MRSQMALDWIARE +N
Sbjct:   157 FQELMTVFQLL--HWNGSLKAMRERHCSRQEVVAHYSNRSLDDEMRSQMALDWIAREHDN 214

Query:   103 PGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQINGGSLSS 151
             PG + REL  AERELET R+AGRELRFPKEKKDILM+AH Q+ G +L+S
Sbjct:   215 PGVIRRELVLAERELETFRMAGRELRFPKEKKDILMIAHNQLGGSALNS 263




GO:0035003 "subapical complex" evidence=IDA
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
GO:0005737 "cytoplasm" evidence=IDA
MGI|MGI:3036267 Lix1l "Lix1-like" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1593161 Lix1l "Lix1 homolog (mouse)-like" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A2VE91 LIX1L "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IVB5 LIX1L "LIX1-like protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1913893 Lix1 "limb expression 1 homolog (chicken)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8IVB5LIX1L_HUMANNo assigned EC number0.60120.94700.4243yesN/A
Q5PQQ7LIX1L_RATNo assigned EC number0.60730.94700.4230yesN/A
Q8BQ89LIX1L_MOUSENo assigned EC number0.60730.94700.4243yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 151
PF14954252 LIX1: Limb expression 1 100.0
>PF14954 LIX1: Limb expression 1 Back     alignment and domain information
Probab=100.00  E-value=9e-89  Score=566.63  Aligned_cols=144  Identities=68%  Similarity=1.000  Sum_probs=142.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHhcccCccccc--Ccch---hhhhhccccchhHH-----------hhhchHHHH
Q psy17864          1 MNSVFNEHPSRRISDDFIEKAVAEARASFKVSFKFQV--NSGL---NLDVTSTIGKKLAT-----------YWNGSLKAM   64 (151)
Q Consensus         1 mNSvfNEhPsRrIt~eFi~ksv~eA~~s~~g~~~d~~--~t~i---~~mLesn~GktmLE-----------HWNGSLKAm   64 (151)
                      ||||||||||||||+|||+|+|+||++||+|+++|++  ||||   +||||+|+||||||           |||||||||
T Consensus        93 mNSvfNEhPsRrIt~eFi~ksv~eA~~s~~~~~~~~~~p~t~igaf~~mLesn~GrtMLEFQElMTVFQLLHWNGSLKAm  172 (252)
T PF14954_consen   93 MNSVFNEHPSRRITDEFIEKSVQEAVASFSGKLEDADDPSTSIGAFRFMLESNKGRTMLEFQELMTVFQLLHWNGSLKAM  172 (252)
T ss_pred             HHHHHhcCCcccccHHHHHHHHHHHHHhcCCCcccccCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcchHHHH
Confidence            8999999999999999999999999999999999998  8999   99999999999999           999999999


Q ss_pred             HhhhhhHHHHHHHhhcccccHHHHHHhHHhHHHhhhcCCCchHHHHHHHHHHHHHHHhccccccCchhhHHHHHHHHhhh
Q psy17864         65 RERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQI  144 (151)
Q Consensus        65 REr~CSRQEViahYS~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~a~rELe~aR~aGrELRF~KEKkdIL~LA~~q~  144 (151)
                      |||+|||||||||||||+||||||||||||||+|||++||+|++||++|++||++||++||||||||||||||+||++|+
T Consensus       173 Rer~CSRQeViahYs~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~A~~ELe~aR~aGrELRF~KEKkdIL~LA~sq~  252 (252)
T PF14954_consen  173 RERQCSRQEVIAHYSQRSLDDDMRSQMALDWIAREQESPGIISQELQVAERELEEARLAGRELRFYKEKKDILSLALSQL  252 (252)
T ss_pred             HHccccHHHHHHHHHhcchhHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999996




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00