Psyllid ID: psy1860

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------66
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKVS
cccHHHHHHccccccEEEEEEEcccccccccccccccccccccEEEEEccccccccccccEEEccccccHHHHHHHHHccccccccccccccccccEEcccccccccEEEEcccHHHHHHHHHcccEEEEccEEEccccccccccccEEcccccEEEEcHHcHHHHHHcccccEEEccccccccHHHHHccccccccccccccccccccEEcccccEEEEEccHHHHHHHHccccccccccccccEEEEEcccccccccEEcccccccccccccccccccccccccHHcccccccccEEEEcccccHHHHHHHHHHHHHHcccccccHHHHHcEEEccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccHHHHHHHHHHHHHHHHHccccEEEEEcccccccEEEEEEcccccccHHHHHcHHHHHHHHHcc
cHHHHHHHccccccEEEEEEEccccccccEEccccHHHHHccccEEcccccccccccccccccEccccccHHHHcHHHcccccccccccccccccccEccccHHHcccEHHHHHHHHHHHHHccccEEEEEEEEEEEEEccccccEcEEEEEEEEEEcHHHHHHHHHHHHHHcEEcccHHHHcccHHHHHccccEEcEEccccccEccEEEEccccccEEcccHHHHHHHccccccccccccccccEEccccccccccEEEcccEEcHHHHHHcHHHHcccHHHccHHHHHHHccEcEEEEEHHHHHcHHHHHHHHHHHHHccccEcEEEEEccEEccccccccccccccccHHHHHEcEEEEEccEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHcHHHHccccccHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEcccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHcc
MQSRLETLFKKEEEYEILDsfqgstlkglqyqplfpyfkhvTSAFRVLTdtyvteesgtgvvhqapyfgeddyrvclaggvitrdqeivcpvdasgcftapvshflglyvkdadkpiIKHLKEQSRlvsagsvkhsypfcwrsdtpliykavpsWFIRVQHMNQDllkcnsdtywvpefvkekRFGNWLREARDWAISrnrywgtpiplwvsddgeeivCVGSIAELhrlsgisvekdlhresvdsvtipsvrpgkpplrrvpevfdcwfesgsmpyaqlhfpfdnrrdfddrfpadfiaegidqtRGWFYTLLVISTAlfkqapfrNLIANGLVLAqdgqkmskskrnypdpmeppfknlianglvlssdgqkmskskknypdpmevrgrlcpvhvwepVHVWSVCLILKEKVLLANDAEEKLSFqyneaegstnimDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRrrlkgeggpaDCKVALNSLTKVLFTMVRVmapytpflCEHLYQNLRHLTGRLERSIHfimmpqpnrgiiDQEIERSVKRMQSVVELGRVIRERvtipikyplreavviHNDAQCLQEIRTLESYILQELNVRTVtfstdkqkygvslraepdhktLGARLKTAFKPITQAIKVS
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTyvteesgtgvvhqapyfGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKeqsrlvsagsvkhsypfcwrsdtpLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVpefvkekrfgnwLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRlsgisvekdlhresvdsvtipsvrpgkpplrrVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRrrlkgeggpadCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVvelgrvirervtipikyplreaVVIHNDAQCLQEIRTLESYILQELNVRTVtfstdkqkygvslraepdhktlgarlktafkpitqaikvs
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHfpfdnrrdfddrfpadfIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKVS
*************EYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL*******************LRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLA**************************************************VRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSL***************************
*QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKV*
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQD**********YPDPMEPPFKNLIANGLVLSSD**********YPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKVS
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKV*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query659 2.2.26 [Sep-21-2011]
Q8BU30 1262 Isoleucine--tRNA ligase, yes N/A 0.981 0.512 0.602 0.0
P41252 1262 Isoleucine--tRNA ligase, yes N/A 0.983 0.513 0.598 0.0
Q21926 1141 Isoleucine--tRNA ligase, yes N/A 0.980 0.566 0.562 0.0
Q54YD4 1067 Probable isoleucine--tRNA yes N/A 0.978 0.604 0.514 0.0
P09436 1072 Isoleucine--tRNA ligase, yes N/A 0.951 0.584 0.492 0.0
O13651 1064 Isoleucine--tRNA ligase, yes N/A 0.974 0.603 0.476 0.0
P36422 1081 Isoleucine--tRNA ligase O N/A N/A 0.969 0.591 0.453 1e-167
Q6MKX0 1056 Isoleucine--tRNA ligase O yes N/A 0.954 0.595 0.448 1e-158
Q9Z972 1043 Isoleucine--tRNA ligase O yes N/A 0.939 0.593 0.419 1e-139
Q73JB2 1100 Isoleucine--tRNA ligase O yes N/A 0.959 0.574 0.408 1e-139
>sp|Q8BU30|SYIC_MOUSE Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Iars PE=2 SV=2 Back     alignment and function desciption
 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/667 (60%), Positives = 494/667 (74%), Gaps = 20/667 (2%)

Query: 2   QSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHV--TSAFRVLTDTYVTEESGT 59
           ++RL  L+K+E +YEIL+ F G++LKG +Y+PLF YF       AF VL D YV +E GT
Sbjct: 260 EARLSALYKQESDYEILERFPGASLKGKKYKPLFDYFIKCKENGAFTVLVDHYVKDEEGT 319

Query: 60  GVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIK 119
           GVVHQAPYFG DD+RVC+   +I +D   VCPVDASGCFT  V+HF+G YVKDADK II+
Sbjct: 320 GVVHQAPYFGADDHRVCMDFNIIQKDSVPVCPVDASGCFTEEVTHFVGQYVKDADKNIIR 379

Query: 120 HLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEF 179
            LKEQ RL++AG+  HSYPFCWRSDTPLIYK+VPSWF+RV+ M   LLK N   YWVPEF
Sbjct: 380 MLKEQGRLLAAGTFTHSYPFCWRSDTPLIYKSVPSWFVRVEPMVDQLLKNNDLCYWVPEF 439

Query: 180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDL 239
           V+EKRFGNWL+EARDWAISRNRYWGTPIPLWVS+D EE+VC+GS+AEL  LSG  +  DL
Sbjct: 440 VREKRFGNWLKEARDWAISRNRYWGTPIPLWVSEDLEEVVCIGSVAELEELSGTKI-SDL 498

Query: 240 HRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFI 299
           HRES+D +TIPS R GK PLRRV EVFDCWFESGSMPYAQ+H+PF+++R+F+D FPADFI
Sbjct: 499 HRESIDHLTIPS-RCGKAPLRRVSEVFDCWFESGSMPYAQVHYPFESKREFEDAFPADFI 557

Query: 300 AEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFK 359
           AEGIDQTRGWFYTLLV++TALF Q PF+N+I NGL+LA DGQKMSK K+NYPDP+     
Sbjct: 558 AEGIDQTRGWFYTLLVLATALFGQPPFKNVIVNGLILASDGQKMSKRKKNYPDPVS-IID 616

Query: 360 NLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLLAN 418
              A+ L L      + +++        VR  L  V + W   + + +  + +       
Sbjct: 617 KYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAYRFFIQNVFRLH----- 671

Query: 419 DAEEKLSFQYNE--AEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNL 476
             EE++ F YNE     S NI D W++SF +SL+ F   EMAAYRLYTVVPRLV F+D L
Sbjct: 672 -KEEEVKFLYNEHTVRESPNITDRWVLSFMQSLLGFFETEMAAYRLYTVVPRLVKFVDIL 730

Query: 477 TNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLR----- 531
           TNWYVRMNRRRLKGE G  DC +AL +L  VL ++ R+MAPYTPFL E +YQNL+     
Sbjct: 731 TNWYVRMNRRRLKGESGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELMYQNLKLLIDP 790

Query: 532 -HLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREA 590
             L  +   SIH++M+P+    +ID++ E +V RMQSV+ELGRVIR+R TIPIKYPL+E 
Sbjct: 791 ASLRDKDTLSIHYLMLPRVREELIDKKTENAVSRMQSVIELGRVIRDRKTIPIKYPLKEI 850

Query: 591 VVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFK 650
           VVIH D + L++IR+LE YI++ELNVR VT STDK KYG+ LRAEPDH  LG RLK AFK
Sbjct: 851 VVIHQDPEALEDIRSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMVLGKRLKGAFK 910

Query: 651 PITQAIK 657
            +  AIK
Sbjct: 911 AVMMAIK 917

Mus musculus (taxid: 10090)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 5
>sp|P41252|SYIC_HUMAN Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=IARS PE=1 SV=2 Back     alignment and function description
>sp|Q21926|SYIC_CAEEL Isoleucine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=irs-1 PE=3 SV=1 Back     alignment and function description
>sp|Q54YD4|SYIC_DICDI Probable isoleucine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|P09436|SYIC_YEAST Isoleucine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ILS1 PE=1 SV=1 Back     alignment and function description
>sp|O13651|SYIC_SCHPO Isoleucine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=irs1 PE=3 SV=1 Back     alignment and function description
>sp|P36422|SYI_TETTH Isoleucine--tRNA ligase OS=Tetrahymena thermophila GN=ILSA PE=3 SV=1 Back     alignment and function description
>sp|Q6MKX0|SYI_BDEBA Isoleucine--tRNA ligase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|Q9Z972|SYI_CHLPN Isoleucine--tRNA ligase OS=Chlamydia pneumoniae GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|Q73JB2|SYI_TREDE Isoleucine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) GN=ileS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
427788475 1185 Putative isoleucyl-trna synthetase [Rhip 0.986 0.548 0.612 0.0
157132561 1226 isoleucyl tRNA synthetase [Aedes aegypti 0.968 0.520 0.625 0.0
357611676 1201 putative isoleucyl tRNA synthetase [Dana 0.972 0.533 0.600 0.0
193595368 1238 PREDICTED: isoleucyl-tRNA synthetase, cy 0.983 0.523 0.623 0.0
321472021 1275 hypothetical protein DAPPUDRAFT_316089 [ 0.983 0.508 0.616 0.0
312372945 1803 hypothetical protein AND_19441 [Anophele 0.986 0.360 0.625 0.0
158301212 1217 AGAP002101-PA [Anopheles gambiae str. PE 0.986 0.534 0.625 0.0
317418825 1158 Isoleucyl-tRNA synthetase, cytoplasmic [ 0.983 0.559 0.616 0.0
348534210 1267 PREDICTED: isoleucyl-tRNA synthetase, cy 0.983 0.511 0.618 0.0
170062217 1221 isoleucyl tRNA synthetase [Culex quinque 0.945 0.510 0.617 0.0
>gi|427788475|gb|JAA59689.1| Putative isoleucyl-trna synthetase [Rhipicephalus pulchellus] Back     alignment and taxonomy information
 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/666 (61%), Positives = 516/666 (77%), Gaps = 16/666 (2%)

Query: 1   MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTS--AFRVLTDTYVTEESG 58
           M++RL+ L+KK EEY IL+ F+GSTL G +Y+P+FPYF+   S  AF V +D YVT ESG
Sbjct: 258 MEARLDILYKKPEEYTILERFKGSTLVGKKYEPIFPYFQQYKSKGAFTVFSDNYVTAESG 317

Query: 59  TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
           TGVVHQAPYFGEDDYRVCL+ G IT+DQEIVCPVDASG FT PV  FLGLYVKDADK II
Sbjct: 318 TGVVHQAPYFGEDDYRVCLSHGAITKDQEIVCPVDASGKFTEPVKDFLGLYVKDADKEII 377

Query: 119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
           K LK + RLV+  + KHSYPFCWRSDTPLIY+AVPSWF+RV+HM +DLLK NS+TYWVP+
Sbjct: 378 KDLKNRGRLVNHSTSKHSYPFCWRSDTPLIYRAVPSWFVRVEHMQEDLLKANSETYWVPD 437

Query: 179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD 238
           F+KEKRFGNWLR+A DWAISRNRYWGTPIP+WVSDDGEE+VCVGSI EL  L+G  V  D
Sbjct: 438 FIKEKRFGNWLRDAHDWAISRNRYWGTPIPIWVSDDGEEVVCVGSIKELEELTGEQV-TD 496

Query: 239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADF 298
           LHRE+VD + IPS + GK  L+R+ EVFDCWFESGSMPYAQ+H+PF+N ++F + FPADF
Sbjct: 497 LHRETVDKLVIPSAK-GKGTLKRISEVFDCWFESGSMPYAQVHYPFENFKEFHNCFPADF 555

Query: 299 IAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPF 358
           IAEG+DQTRGWFYTLLV+STALF +APF+NLIANG+VLA DGQKMSK K+NYPDPM+   
Sbjct: 556 IAEGVDQTRGWFYTLLVLSTALFGKAPFKNLIANGMVLASDGQKMSKRKKNYPDPMD-VV 614

Query: 359 KNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLLA 417
           K   A+ L L      + +++        VR  L  V + W   + +    +++  VL  
Sbjct: 615 KKYGADALRLYLINSPVVRAENLRFREEGVRDILKDVFLPWYNAYRF----LVQNIVLFE 670

Query: 418 NDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLT 477
            +  EK  +  ++A GS N MD WI+S+++SL+ FV+ EM  YRLYTVVPRLV F+D+LT
Sbjct: 671 KEHGEKYVYSESKA-GSANYMDRWILSYTQSLVLFVKTEMKEYRLYTVVPRLVKFVDHLT 729

Query: 478 NWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRL 537
           NWYVRMNR+RLKGEGG  DCK +L++L  VL+TM+R+MAP+TPFL E +YQNLRHL   L
Sbjct: 730 NWYVRMNRKRLKGEGGKEDCKHSLDTLCSVLYTMIRLMAPFTPFLTELMYQNLRHLFSEL 789

Query: 538 E-----RSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVV 592
                 RSIH++M+P+P   +I++ +ERSV RMQ+V+ELGR++R+R T+P+KYPLRE VV
Sbjct: 790 SCKEDARSIHYLMLPEPRNELIEEVVERSVSRMQTVIELGRIVRDRKTLPLKYPLREVVV 849

Query: 593 IHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPI 652
           IH D Q L ++ +L+ YIL+ELN+R +T + +K+KYGV ++AEPD K LG RL+   K +
Sbjct: 850 IHKDQQYLDDVASLKQYILEELNIRQLTVTVEKEKYGVLMKAEPDIKALGLRLRGESKAV 909

Query: 653 TQAIKV 658
           +Q I+ 
Sbjct: 910 SQEIRA 915

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|157132561|ref|XP_001656071.1| isoleucyl tRNA synthetase [Aedes aegypti] gi|108884366|gb|EAT48591.1| AAEL000388-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|357611676|gb|EHJ67602.1| putative isoleucyl tRNA synthetase [Danaus plexippus] Back     alignment and taxonomy information
>gi|193595368|ref|XP_001943374.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|321472021|gb|EFX82992.1| hypothetical protein DAPPUDRAFT_316089 [Daphnia pulex] Back     alignment and taxonomy information
>gi|312372945|gb|EFR20792.1| hypothetical protein AND_19441 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158301212|ref|XP_320939.3| AGAP002101-PA [Anopheles gambiae str. PEST] gi|157012361|gb|EAA01000.3| AGAP002101-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|317418825|emb|CBN80863.1| Isoleucyl-tRNA synthetase, cytoplasmic [Dicentrarchus labrax] Back     alignment and taxonomy information
>gi|348534210|ref|XP_003454596.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic [Oreochromis niloticus] Back     alignment and taxonomy information
>gi|170062217|ref|XP_001866572.1| isoleucyl tRNA synthetase [Culex quinquefasciatus] gi|167880214|gb|EDS43597.1| isoleucyl tRNA synthetase [Culex quinquefasciatus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query659
UNIPROTKB|E1BQH2 1265 IARS "Uncharacterized protein" 0.984 0.513 0.606 4e-209
ZFIN|ZDB-GENE-030131-6325 1271 iars "isoleucyl-tRNA synthetas 0.983 0.509 0.609 1.5e-207
MGI|MGI:2145219 1262 Iars "isoleucine-tRNA syntheta 0.981 0.512 0.590 6.2e-204
UNIPROTKB|F1LS86 1263 Iars "Protein Iars" [Rattus no 0.983 0.513 0.590 2.1e-203
UNIPROTKB|F1PLJ9 1262 IARS "Uncharacterized protein" 0.983 0.513 0.589 2.7e-203
UNIPROTKB|A7MBC5 1262 IARS "IARS protein" [Bos tauru 0.983 0.513 0.586 2.4e-202
UNIPROTKB|J3KR24 1152 IARS "Isoleucine--tRNA ligase, 0.983 0.562 0.585 3.2e-200
UNIPROTKB|P41252 1262 IARS "Isoleucine--tRNA ligase, 0.983 0.513 0.585 3.2e-200
FB|FBgn0027086 1229 Aats-ile "Isoleucyl-tRNA synth 0.992 0.532 0.573 8.4e-200
WB|WBGene00002152 1141 iars-1 [Caenorhabditis elegans 0.981 0.567 0.546 5e-186
UNIPROTKB|E1BQH2 IARS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 2022 (716.8 bits), Expect = 4.0e-209, P = 4.0e-209
 Identities = 405/668 (60%), Positives = 483/668 (72%)

Query:     1 MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTS--AFRVLTDTYVTEESG 58
             M+SRL  L+K + EYEILD F G  LKG +Y+PLF YF       AF VL D+YV EE G
Sbjct:   259 MESRLIALYKSDSEYEILDRFPGIVLKGKKYKPLFEYFIQCKDQGAFTVLVDSYVKEEEG 318

Query:    59 TGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPII 118
             TGVVHQAPYFG DDYRVC+   +I +D   VCPVD SGCFTA V+ F G YVKDADK II
Sbjct:   319 TGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDVSGCFTAEVTDFAGQYVKDADKNII 378

Query:   119 KHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPE 178
             K LKE+ RLV + S KHSYPFCWRSDTPLIYKAVPSWF+RV+HM + LL+ N+  YWVP+
Sbjct:   379 KLLKEKGRLVHSSSYKHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPD 438

Query:   179 FVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKD 238
             FV+EKRFGNWL++ARDWAISRNRYWGTPIPLWVSDD EE+VC+GS+AEL  LSG+ V  D
Sbjct:   439 FVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVCIGSMAELEELSGVKVT-D 497

Query:   239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHXXXXXXXXXXXXXXXXX 298
             LHRES+D +TIPS R GK  LRRVPEVFDCWFESGSMPYAQ+H                 
Sbjct:   498 LHRESIDHLTIPS-RCGKGVLRRVPEVFDCWFESGSMPYAQVHYPFENKKELEDAFPADF 556

Query:   299 IAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPF 358
             IAEGIDQTRGWFYTLLV+STALF + PF+N+I NGLVLA DGQKMSK K+NYPDPM    
Sbjct:   557 IAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMAI-V 615

Query:   359 KNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHV-WEPVHVWSVCLILKEKVLLA 417
              +  A+ L L      + +++        VR  L  V + W     ++    L + V + 
Sbjct:   616 NSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPW-----YNAYRFLVQNVHIL 670

Query:   418 NDAEEKLSFQYNE--AEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDN 475
                +E   F YNE   + S NIMD WI+SF++SLI+F + EMAAYRLYTVVPRLV F+D 
Sbjct:   671 QHKDEGREFLYNENTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTVVPRLVKFVDI 730

Query:   476 LTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTG 535
             LTNWYVRMNRRRLKGE G  DC +AL +L  VLF+M R+MAPYTPF+ E +YQNL+ L  
Sbjct:   731 LTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITELMYQNLKTLID 790

Query:   536 ------RLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLRE 589
                   +   SIH++M+P     +ID++IE +V  +QSV+ELGRVIR+R TIP+KYPL+E
Sbjct:   791 PASVQEKNTESIHYLMLPPVREDLIDRKIESAVSCLQSVIELGRVIRDRKTIPVKYPLKE 850

Query:   590 AVVIHNDAQCLQEIRTLESYILQELNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAF 649
              VVIH D + L+ IR+LE YIL+ELNVR VT ST+K KYGV LRAEPDH  LG RLK AF
Sbjct:   851 VVVIHQDPEALENIRSLEKYILEELNVRQVTLSTNKDKYGVRLRAEPDHMVLGKRLKGAF 910

Query:   650 KPITQAIK 657
             KP+  AIK
Sbjct:   911 KPVMAAIK 918
GO:0002161 "aminoacyl-tRNA editing activity" evidence=IEA
GO:0004822 "isoleucine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0006428 "isoleucyl-tRNA aminoacylation" evidence=IEA
GO:0005634 "nucleus" evidence=IEA
ZFIN|ZDB-GENE-030131-6325 iars "isoleucyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2145219 Iars "isoleucine-tRNA synthetase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1LS86 Iars "Protein Iars" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PLJ9 IARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBC5 IARS "IARS protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J3KR24 IARS "Isoleucine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P41252 IARS "Isoleucine--tRNA ligase, cytoplasmic" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
FB|FBgn0027086 Aats-ile "Isoleucyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
WB|WBGene00002152 iars-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O13651SYIC_SCHPO6, ., 1, ., 1, ., 50.47690.97420.6033yesN/A
Q8BU30SYIC_MOUSE6, ., 1, ., 1, ., 50.60260.98170.5126yesN/A
Q21926SYIC_CAEEL6, ., 1, ., 1, ., 50.56270.98020.5661yesN/A
P41252SYIC_HUMAN6, ., 1, ., 1, ., 50.59880.98330.5134yesN/A
Q54YD4SYIC_DICDI6, ., 1, ., 1, ., 50.51420.97870.6044yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.50.824
3rd Layer6.1.10.766

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 0.0
PRK06039975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 0.0
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 0.0
COG0060933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 0.0
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 0.0
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 1e-147
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 9e-95
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 1e-75
COG0525877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 6e-67
cd07961183 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding 1e-66
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 7e-66
TIGR00422861 TIGR00422, valS, valyl-tRNA synthetase 2e-61
PLN02843974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 6e-56
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 3e-47
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 9e-41
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 4e-36
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 2e-32
PTZ00419995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 1e-30
PLN02943958 PLN02943, PLN02943, aminoacyl-tRNA ligase 2e-28
pfam08264148 pfam08264, Anticodon_1, Anticodon-binding domain o 2e-26
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 1e-25
PLN023811066 PLN02381, PLN02381, valyl-tRNA synthetase 2e-17
cd07962135 cd07962, Anticodon_Ia_Val, Anticodon-binding domai 6e-12
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 3e-11
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 6e-11
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 9e-11
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 2e-10
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 3e-10
TIGR00395938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 5e-09
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 1e-06
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 2e-06
PLN02563963 PLN02563, PLN02563, aminoacyl-tRNA ligase 1e-05
cd07959117 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d 2e-05
cd07960180 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding d 3e-05
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 5e-05
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 1e-04
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 1e-04
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 2e-04
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 5e-04
cd07375117 cd07375, Anticodon_Ia_like, Anticodon-binding doma 0.003
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information 
 Score =  857 bits (2217), Expect = 0.0
 Identities = 360/704 (51%), Positives = 454/704 (64%), Gaps = 85/704 (12%)

Query: 2   QSRLETLF-------------KKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTS-AFRV 47
           +SRL  L                 E YE+L    GS+L G +Y+PLF YF   +  AFRV
Sbjct: 260 ESRLSALPTAKPKSKKGSKPENAAEGYEVLAKVPGSSLVGKKYEPLFDYFSEFSDTAFRV 319

Query: 48  LTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLG 107
           + D YVT++SGTGVVH AP FGEDDYRVCLA G+I +   +  PVD  GCFT  V+ F G
Sbjct: 320 VADDYVTDDSGTGVVHCAPAFGEDDYRVCLANGIIEKGGNLPVPVDDDGCFTEKVTDFSG 379

Query: 108 LYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLL 167
            YVKDADK II  +K + RLV +GS+ HSYPFCWRSDTPLIY+AVPSWF++V+ +   LL
Sbjct: 380 RYVKDADKDIIAAIKAKGRLVKSGSITHSYPFCWRSDTPLIYRAVPSWFVKVEEIKDRLL 439

Query: 168 KCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAEL 227
           + N  TYWVP++VKEKRF NWL  ARDWA+SR+R+WGTP+P+W+SDDGEE+V +GSIAEL
Sbjct: 440 ENNKQTYWVPDYVKEKRFHNWLENARDWAVSRSRFWGTPLPIWISDDGEEVVVIGSIAEL 499

Query: 228 HRLSGISVEKDLHRESVDSVTIPSVR-PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDN 286
            +LSG+ V  DLHR  +D +TIPS R P    LRRV +VFDCWFESGSMPYA +H+PF+N
Sbjct: 500 EKLSGVKVT-DLHRHFIDHITIPSSRGPEFGVLRRVDDVFDCWFESGSMPYAYIHYPFEN 558

Query: 287 RRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKS 346
           +  F+  FPADF+AEG+DQTRGWFYTL+V+STALF +                       
Sbjct: 559 KELFEKNFPADFVAEGLDQTRGWFYTLMVLSTALFDK----------------------- 595

Query: 347 KRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRG-------RL----CPV 395
                    P FKNLI NGLVL+ DG+KMSKS KNYPDP EV         RL     PV
Sbjct: 596 ---------PAFKNLICNGLVLAEDGKKMSKSLKNYPDPNEVIDKYGADALRLYLINSPV 646

Query: 396 HVWEPVH-----VWSVCLILKE---------KVLLAN----DAEEKLSFQYNEAE---GS 434
              EP+      V+ V   +K+         + L+ N    + E    F   +      S
Sbjct: 647 VRAEPLRFKEEGVFGV---VKDVFLPWYNAYRFLVQNAKRLEVEGGAPFVPLDLAKLQNS 703

Query: 435 TNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGP 494
            N++D WI S ++SL++FVR+EM AYRLYTVVP LV FIDNLTN YVR NR+RLKG  G 
Sbjct: 704 ANVLDRWINSATQSLVKFVREEMGAYRLYTVVPYLVKFIDNLTNIYVRFNRKRLKGRTGE 763

Query: 495 ADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGII 554
            DC+ AL++L  VL T  +VMAP+TPF  E LYQNLR +    E SIH+   PQ + G +
Sbjct: 764 EDCRTALSTLYNVLLTSCKVMAPFTPFFTEVLYQNLRKVLPGSEESIHYCSFPQVDEGEL 823

Query: 555 DQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEIR-TLESYILQE 613
           D+ IE+SV RMQ+V+EL R IRER   P+K PL+E VV+H DA+ L +I   L+ Y+L+E
Sbjct: 824 DERIEQSVSRMQTVIELARNIRERHNKPLKTPLKEMVVVHPDAEFLDDITGKLKEYVLEE 883

Query: 614 LNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIK 657
           LNVR++    D  KY  SLRAEP+   LG RL  +   + + +K
Sbjct: 884 LNVRSLVPCNDPLKY-ASLRAEPNFSVLGKRLGKSMGLVAKEVK 926

Length = 1159
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|153414 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153408 cd07375, Anticodon_Ia_like, Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 659
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
KOG0434|consensus 1070 100.0
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
PRK06039975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PLN023811066 valyl-tRNA synthetase 100.0
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 100.0
PRK05729874 valS valyl-tRNA synthetase; Reviewed 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
PLN02843974 isoleucyl-tRNA synthetase 100.0
PLN02943958 aminoacyl-tRNA ligase 100.0
KOG0432|consensus995 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
KOG0433|consensus937 100.0
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 100.0
PLN029591084 aminoacyl-tRNA ligase 100.0
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
PLN02563963 aminoacyl-tRNA ligase 100.0
PRK12267648 methionyl-tRNA synthetase; Reviewed 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
KOG0437|consensus1080 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
KOG0435|consensus876 100.0
PLN02224616 methionine-tRNA ligase 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
KOG0436|consensus578 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
KOG1247|consensus567 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.97
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 99.9
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.9
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.89
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.85
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.84
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.73
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.71
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.66
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 99.63
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.6
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.6
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.58
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.58
PLN02946557 cysteine-tRNA ligase 99.56
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.53
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.52
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.5
KOG2007|consensus586 99.48
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.45
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.41
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.39
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.32
cd00674353 LysRS_core_class_I catalytic core domain of class 99.19
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.14
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.11
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 98.99
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.44
PRK12451562 arginyl-tRNA synthetase; Reviewed 98.31
PLN02286576 arginine-tRNA ligase 98.12
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 97.93
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 97.6
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 97.4
PLN02563 963 aminoacyl-tRNA ligase 96.86
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 96.79
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 96.57
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 96.5
cd00802143 class_I_aaRS_core catalytic core domain of class I 96.27
PRK13354410 tyrosyl-tRNA synthetase; Provisional 96.03
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 95.98
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 95.97
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 95.74
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 95.73
PRK05912408 tyrosyl-tRNA synthetase; Validated 95.73
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 95.56
KOG0435|consensus 876 95.15
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 94.93
PRK08560329 tyrosyl-tRNA synthetase; Validated 94.68
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 94.21
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 93.99
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 93.99
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 93.78
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 93.58
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 93.55
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 92.31
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 92.16
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 91.97
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 91.64
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 90.98
cd00808239 GluRS_core catalytic core domain of discriminating 90.69
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 89.95
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 89.46
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 86.87
PLN02486383 aminoacyl-tRNA ligase 83.21
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information 
Probab=100.00  E-value=2.4e-129  Score=1143.73  Aligned_cols=640  Identities=56%  Similarity=0.953  Sum_probs=561.9

Q ss_pred             cchHHHHhhc-------------CCceEEEEeeecCCccCCccccCccccccc-CceeEEEeCCCcCCCCCCceeecCCC
Q psy1860           2 QSRLETLFKK-------------EEEYEILDSFQGSTLKGLQYQPLFPYFKHV-TSAFRVLTDTYVTEESGTGVVHQAPY   67 (659)
Q Consensus         2 ~~~~~~~~~~-------------~~~~~~~~~~~G~~l~g~~~~~p~~~~~~~-~~~~pi~~~~~V~~~~GTG~V~~~Pa   67 (659)
                      ++|++.+++.             .++++|+++++|++|+|++|.|||+++... ++.+||++++||++++|||+||+|||
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~G~~L~g~~y~p~~~~~~~~~~~~~~Vi~~~~V~~~~GTGiVh~aPa  339 (1159)
T PLN02882        260 ESRLSALPTAKPKSKKGSKPENAAEGYEVLAKVPGSSLVGKKYEPLFDYFSEFSDTAFRVVADDYVTDDSGTGVVHCAPA  339 (1159)
T ss_pred             HHHHHHHHhhhhcccccccccccccccEEEEEecchhhcCCEEECCccccccccCceEEEEccCccCCCCCcceeEecCC
Confidence            4577777642             246999999999999999999998754321 35799999999999999999999999


Q ss_pred             CChhhHHHHHhCCCCCCCCccccccCCCccccCCCccccCcccccCchHHHHHHHhcCCEeEeecccccCCccccCCCcE
Q psy1860          68 FGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPL  147 (659)
Q Consensus        68 h~~~D~~~~~~~~l~~~~~~~~~~vd~~G~~~~~~~~~~g~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~~~r~g~~v  147 (659)
                      ||++||++|++|||+.+.++++++||++|+|++.+++|+|+.++||++.|++.|+++|.+++.++++|+||||||||+|+
T Consensus       340 hG~~Dy~v~~~~gl~~~~~~~~~~vd~~G~~~~~~~~~~G~~v~eA~~~Ii~~Lk~~g~L~~~~~~~Hsyp~cwR~~tpl  419 (1159)
T PLN02882        340 FGEDDYRVCLANGIIEKGGNLPVPVDDDGCFTEKVTDFSGRYVKDADKDIIAAIKAKGRLVKSGSITHSYPFCWRSDTPL  419 (1159)
T ss_pred             CChhHHHHHHHcCCCccccCccceECCCceEccCCcccCCCCHHHhhHHHHHHHHHCCCccceeeeecCCCEeeCCCCEE
Confidence            99999999999999777777899999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCceeeechHhHHHHHHhcCCceEecCcccchhhhhhhcCCCceEeeeccCCCccccEEEeCCCCeEEEeccHHHH
Q psy1860         148 IYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAEL  227 (659)
Q Consensus       148 ~~~~~~qwFi~~~~~k~~~~~~~~~~~~~P~~~~~~~~~~~l~~l~Dw~ISRqr~WG~piP~~~~~~~~~~i~~~~~~~~  227 (659)
                      |+++++||||+++++|+++++.+++++|+|++.+++++.+||++++||||||||+||||||+|+|+++++++++.+++++
T Consensus       420 i~~a~~qWFi~~~~~k~~~l~~~~~i~w~P~~~~~~r~~~wl~~~~DW~ISRqR~WGtPIPvw~~~~~~~~~~~~s~~el  499 (1159)
T PLN02882        420 IYRAVPSWFVKVEEIKDRLLENNKQTYWVPDYVKEKRFHNWLENARDWAVSRSRFWGTPLPIWISDDGEEVVVIGSIAEL  499 (1159)
T ss_pred             EEEecceeEEEcHHHHHHHHHhhCCcEEECCcchhhHHHHHHhcCcccceeeccccCCccceEEeCCCCeEEecCcHHHH
Confidence            99999999999999999999999999999999866899999999999999999999999999999988889999999999


Q ss_pred             HHhhCCccccccccccccccccCCCCC-CCCCccccccccceeccCCCCccccccCCCCCcccccccCCcceEeeccccc
Q psy1860         228 HRLSGISVEKDLHRESVDSVTIPSVRP-GKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQT  306 (659)
Q Consensus       228 ~~~~~~~~~~~~~~~~~d~~~~~~~~~-g~~~~~~~~dvlDvWfdS~~~~~~~~~~~~~~~~~~~~~~p~d~~~~G~D~~  306 (659)
                      .+..+..+. |+|++++|++++|+.|+ +.+.++|++||||||||||++|+++++||+++++.|..+||+|++++|+||+
T Consensus       500 ~~~~~~~~~-dlh~~~id~i~~p~~~~~~~~~~~r~~dVlD~WFdSg~~p~a~~~~p~e~~~~f~~~~PaD~i~eG~Dq~  578 (1159)
T PLN02882        500 EKLSGVKVT-DLHRHFIDHITIPSSRGPEFGVLRRVDDVFDCWFESGSMPYAYIHYPFENKELFEKNFPADFVAEGLDQT  578 (1159)
T ss_pred             HHHhCCchh-hccccchhhhccccccCCchhceEecCceeeeeeccCccHHHHcCCcccChhHhhccCCceEEEEecchh
Confidence            998887766 99999999999998542 1247999999999999999999999999988888899999999999999999


Q ss_pred             hhHHHHHHHHHhhhcCCCCCCeEEEeceeecCCCCccccCCCCCCCCCCCCCcCCCchhhhhhcccccccccccCCCCCc
Q psy1860         307 RGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPM  386 (659)
Q Consensus       307 ~~w~~~~ll~~~~~~~~~p~k~v~~hG~v~~~~G~KMSKS~GN~i~p~~~i~~y~gaD~lR~~l~~~~msk~~~~~~~~~  386 (659)
                      ||||++++++++++++.+||++|++||||++++|+|||||+||+|+|.+++++| |||+||||+         +++.   
T Consensus       579 RgWf~~ll~~s~~l~~~~pfk~VivhG~vlde~G~KMSKSlGNvIdP~evi~~Y-GADaLR~~L---------l~s~---  645 (1159)
T PLN02882        579 RGWFYTLMVLSTALFDKPAFKNLICNGLVLAEDGKKMSKSLKNYPDPNEVIDKY-GADALRLYL---------INSP---  645 (1159)
T ss_pred             hhHHHHHHHHHHHhcCCCCcceeEEccEEECCCCCCcccCCCCCCCHHHHHHHh-CcHHHHHHH---------HhCC---
Confidence            999999999999999999999999999999999999999999999999999999 999999999         6541   


Q ss_pred             cccCcccccccCchhhhHHHHHHHHHHH-----HHhccchh----hcccccccc--c-CCCChhhHHHHHHHHHHHHHHH
Q psy1860         387 EVRGRLCPVHVWEPVHVWSVCLILKEKV-----LLANDAEE----KLSFQYNEA--E-GSTNIMDAWIISFSESLIEFVR  454 (659)
Q Consensus       387 ~~~~~d~~f~lw~~~~~~~~~~~~~~l~-----~l~n~~~~----~~~~~~~~~--~-~~~~~~d~~il~~l~~~~~~~~  454 (659)
                      ...++|.+|+  .+...+..++++++++     ++.|....    ...|.+...  . ...+.+|+|++++++++++.++
T Consensus       646 ~~~~~d~~fs--~~~v~~~~~~~l~kl~Na~rfl~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~D~wIls~l~~li~~v~  723 (1159)
T PLN02882        646 VVRAEPLRFK--EEGVFGVVKDVFLPWYNAYRFLVQNAKRLEVEGGAPFVPLDLAKLQNSANVLDRWINSATQSLVKFVR  723 (1159)
T ss_pred             cccCcCcccC--HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccCCCccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            2246889998  3333334456666663     23332110    011222110  0 1236789999999999999999


Q ss_pred             HHHHhcchhhHHHHHHHHHHHHHHHHHHHccccccCCCChHhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHhhhhc
Q psy1860         455 KEMAAYRLYTVVPRLVLFIDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLT  534 (659)
Q Consensus       455 ~~~e~~~~~~a~~~l~~f~~~~~~~Yle~~K~~l~~~~~~~~~~~~~~~l~~~l~~~~~lL~P~~P~~aEeiw~~L~~~~  534 (659)
                      ++|++|+|++|++.+++|++++||||++.+|+|++.+.+..+++++++++++++..+++||+|||||+||+||++|+...
T Consensus       724 ~~me~y~f~~A~~~I~~Fv~~lsN~YIe~~Kprl~~~~~~~~~~~al~tL~~vL~~l~~LLaPfmPf~aEeI~q~L~~~~  803 (1159)
T PLN02882        724 EEMGAYRLYTVVPYLVKFIDNLTNIYVRFNRKRLKGRTGEEDCRTALSTLYNVLLTSCKVMAPFTPFFTEVLYQNLRKVL  803 (1159)
T ss_pred             HHHHccCHHHHHHHHHHHHHHHhHHHHHhCCHhhhCCCChHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHhcccc
Confidence            99999999999999999997799999999999998765556678899999999999999999999999999999997422


Q ss_pred             CCCCCCceeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCceeEEEEcCCHHHHHHH-HHHHHHHHhH
Q psy1860         535 GRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERVTIPIKYPLREAVVIHNDAQCLQEI-RTLESYILQE  613 (659)
Q Consensus       535 ~~~~~sv~~~~~P~~~~~~~d~~~e~~~~~~~~~i~~~r~~r~~~~i~~~~pl~~~~~~~~d~~~~~~l-~~l~~~I~~l  613 (659)
                      ....+|||++.||.+.+.++|+++|..++.++++++.+|++|++.++++++|++..++...+.+..+.+ +.++++|+.+
T Consensus       804 ~~~~~SVh~~~~P~~~~~~~d~~le~~~~~~~~ii~~~r~~r~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~i~~e  883 (1159)
T PLN02882        804 PGSEESIHYCSFPQVDEGELDERIEQSVSRMQTVIELARNIRERHNKPLKTPLKEMVVVHPDAEFLDDITGKLKEYVLEE  883 (1159)
T ss_pred             CCCCCceeecCCCCcchhhcchhHHHHHHHHHHHHHHHHHHHHHcCCCCCCccceeeEecCCHHHHHHHHHHHHHHHHHh
Confidence            223579999999999888889999999999999999999999999999999999776666565555455 6889999999


Q ss_pred             hCcccEEEEeCCceeEEEecccCCHHHHHHHHHhhHHHHHHHHhh
Q psy1860         614 LNVRTVTFSTDKQKYGVSLRAEPDHKTLGARLKTAFKPITQAIKV  658 (659)
Q Consensus       614 ~nv~~v~~~~~~~~~~v~l~~~~d~~~~~~rl~k~~~~~~~~~~~  658 (659)
                      +|++++.+.++..++ +.+.+.+|++.+|+||+|.++++.++|++
T Consensus       884 ~nv~~v~~~~~~~~~-~~~~~~pn~~~lG~~~~~~~~~v~~~i~~  927 (1159)
T PLN02882        884 LNVRSLVPCNDPLKY-ASLRAEPNFSVLGKRLGKSMGLVAKEVKA  927 (1159)
T ss_pred             hCcceEEEeecccce-EEEEEeeCchHhchhhhhhHHHHHHHHHh
Confidence            999999987665554 68899999999999999999999999985

>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>KOG0434|consensus Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0432|consensus Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0433|consensus Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0437|consensus Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>KOG0435|consensus Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>KOG0436|consensus Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>KOG1247|consensus Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG2007|consensus Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>KOG0435|consensus Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 1e-86
1qu2_A917 Insights Into Editing From An Ile-Trna Synthetase S 6e-42
1gax_A862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 3e-27
1wk8_A194 Isoleucyl-Trna Synthetase Editing Domain Complexed 7e-13
1wny_A186 Isoleucyl-Trna Synthetase Editing Domain Length = 1 4e-11
1ue0_A182 Isoleucyl-Trna Synthetase Editing Domain Complexed 1e-10
1udz_A182 Isoleucyl-Trna Synthetase Editing Domain Length = 1 3e-10
1wz2_A967 The Crystal Structure Of Leucyl-Trna Synthetase And 5e-06
4aq7_A880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 6e-06
1wkb_A810 Crystal Structure Of Leucyl-Trna Synthetase From Th 2e-05
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure 
Iteration: 1

 Score =  317 bits (812), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/573 (33%), Positives = 289/573 (50%), Gaps = 26/573 (4%)
Query: 13  EEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDD 72
           E  ++L +F G  L+GL Y P  PY + +   + V+   YV++E GTG+VHQAP FG +D
Sbjct: 271 EGTQVLKTFPGKALEGLPYTP--PYPQALEKGYFVVLADYVSQEDGTGIVHQAPAFGAED 328
Query: 73  YRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKHLKEQSRLVSAGS 132
                  G+      ++  VD  G     V  F GLY ++A++ I++ L+ +  L    S
Sbjct: 329 LETARVYGL-----PLLKTVDEEGKLL--VEPFKGLYFREANRAILRDLRGRGLLFKEES 381
Query: 133 VKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREA 192
             HSYP CWR  TPL+Y A  SWFI+      +L++ N + +WVP  +KE R+G WL+  
Sbjct: 382 YLHSYPHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNL 441
Query: 193 RDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEK--DLHRESVDSVTIP 250
            DWA+SRNRYWGTP+P+WV     +   +GS  EL   +   + +  D HR  VD V + 
Sbjct: 442 VDWALSRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELA 501
Query: 251 SVRPGKPPLRRVPEVFDCWFESGSMPYAQLHXXXXXXXXXXXXXXXXXIAEGIDQTRGWF 310
               G   +RRVP V D W++SG+MP+A LH                 IAEGIDQTRGWF
Sbjct: 502 CACGGT--MRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWF 559
Query: 311 YTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSS 370
            +L  +   LF    F+N+I +GL+L + GQKMSKSK N  DP +           ++  
Sbjct: 560 NSLHQLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWD-----------IIRK 608
Query: 371 DGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLANDAEEKLSFQYNE 430
            G    +       P E   R  P  V E V  + + L       +     ++   +   
Sbjct: 609 FGADALRWYIYVSAPPEADRRFGPNLVRETVRDYFLTLWNVYSFFVTYANLDRPDLKNPP 668
Query: 431 AEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLF-IDNLTNWYVRMNRRRLK 489
                  MD W+++  + LI+ V + + AY   T    L  F +++L+ WYVR NRRR  
Sbjct: 669 PPEKRPEMDRWLLARMQDLIQRVTEALEAYDPTTSARALRDFVVEDLSQWYVRRNRRRFW 728
Query: 490 GEGGPADCKVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNL-RHLTGRLERSIHFIMMPQ 548
                 D + A  +L + L  +  + AP+TPFL E L+QNL R +    + S+H    P+
Sbjct: 729 KNEDALDREAAYATLYEALVLVATLAAPFTPFLAEVLWQNLVRSVRLEAKESVHLADWPE 788
Query: 549 PNRGIIDQEIERSVKRMQSVVELGRVIRERVTI 581
            +  + D+ +   ++ +  VV+L R  R +  +
Sbjct: 789 ADPALADEALVAQMRAVLKVVDLARAARAKSGV 821
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1WK8|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With The Pre-Transfer Editing Substrate Analogue, Val-Ams Length = 194 Back     alignment and structure
>pdb|1WNY|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 186 Back     alignment and structure
>pdb|1UE0|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With L- Valine Length = 182 Back     alignment and structure
>pdb|1UDZ|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 182 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query659
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 0.0
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 2e-93
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 8e-83
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 2e-73
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 3e-54
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-27
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 5e-12
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 2e-07
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 4e-23
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 4e-17
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 3e-13
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 7e-09
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-05
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 9e-06
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 2e-05
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
 Score =  778 bits (2011), Expect = 0.0
 Identities = 194/602 (32%), Positives = 295/602 (49%), Gaps = 62/602 (10%)

Query: 1   MQSRLETLFKKEEEYEILDSFQGSTLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTG 60
            +     L    E  ++L +F G  L+GL Y P +P        + V+   YV++E GTG
Sbjct: 261 EEGLGRKLLG--EGTQVLKTFPGKALEGLPYTPPYPQALE--KGYFVVLADYVSQEDGTG 316

Query: 61  VVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPVSHFLGLYVKDADKPIIKH 120
           +VHQAP FG +D       G+      ++  VD  G        F GLY ++A++ I++ 
Sbjct: 317 IVHQAPAFGAEDLETARVYGL-----PLLKTVDEEGKLLVE--PFKGLYFREANRAILRD 369

Query: 121 LKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFV 180
           L+ +  L    S  HSYP CWR  TPL+Y A  SWFI+      +L++ N + +WVP  +
Sbjct: 370 LRGRGLLFKEESYLHSYPHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHI 429

Query: 181 KEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEK--D 238
           KE R+G WL+   DWA+SRNRYWGTP+P+WV     +   +GS  EL   +   + +  D
Sbjct: 430 KEGRYGEWLKNLVDWALSRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFD 489

Query: 239 LHRESVDSVTIPSVRPGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADF 298
            HR  VD V +         +RRVP V D W++SG+MP+A LH+PF++   F + FPADF
Sbjct: 490 PHRPYVDQVELAC--ACGGTMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADF 547

Query: 299 IAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPMEPPF 358
           IAEGIDQTRGWF +L  +   LF    F+N+I +GL+L + GQKMSKSK N  DP +   
Sbjct: 548 IAEGIDQTRGWFNSLHQLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWD--- 604

Query: 359 KNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRL---CPVHVWEPVHV-WSVCLILKEKV 414
                   ++   G           D +    R                 +   +++E V
Sbjct: 605 --------IIRKFG----------ADAL----RWYIYVSAPPEADRRFGPN---LVRETV 639

Query: 415 -------------LLANDAEEKLSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYR 461
                         +     ++   +          MD W+++  + LI+ V + + AY 
Sbjct: 640 RDYFLTLWNVYSFFVTYANLDRPDLKNPPPPEKRPEMDRWLLARMQDLIQRVTEALEAYD 699

Query: 462 LYTVVPRLVLF-IDNLTNWYVRMNRRRLKGEGGPADCKVALNSLTKVLFTMVRVMAPYTP 520
             T    L  F +++L+ WYVR NRRR        D + A  +L + L  +  + AP+TP
Sbjct: 700 PTTSARALRDFVVEDLSQWYVRRNRRRFWKNEDALDREAAYATLYEALVLVATLAAPFTP 759

Query: 521 FLCEHLYQNLRHLTGR-LERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRERV 579
           FL E L+QNL        + S+H    P+ +  + D+ +   ++ +  VV+L R  R + 
Sbjct: 760 FLAEVLWQNLVRSVRLEAKESVHLADWPEADPALADEALVAQMRAVLKVVDLARAARAKS 819

Query: 580 TI 581
            +
Sbjct: 820 GV 821
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Length = 186 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 100.0
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 100.0
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 100.0
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 100.0
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 100.0
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 100.0
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 100.0
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 99.94
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 99.9
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.89
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 99.88
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 99.88
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 99.86
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 99.84
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.83
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 99.8
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.78
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.75
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.62
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.11
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.04
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.0
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 97.47
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 97.35
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 97.27
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 96.58
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 96.57
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 96.35
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 96.34
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 96.28
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 96.26
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 96.21
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.19
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 96.14
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 96.02
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 95.99
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 95.91
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 95.91
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 95.68
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 95.62
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 95.17
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 95.15
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 95.14
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 95.13
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 95.05
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 94.96
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 94.77
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 94.5
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 94.48
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 94.36
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 94.35
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 94.26
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 93.75
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 93.61
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 93.59
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 93.43
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 92.66
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 92.61
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 92.52
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 92.15
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 91.79
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 91.52
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 91.35
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 91.34
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 91.15
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 91.1
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 90.52
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 90.4
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 88.02
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 86.84
4dac_A28 Computationally designed crystal forming protein; 83.14
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
Probab=100.00  E-value=5.6e-115  Score=1004.99  Aligned_cols=569  Identities=23%  Similarity=0.366  Sum_probs=499.2

Q ss_pred             CCccCCccccCcccccccCceeEEEeCCCcCCCCCCceeecCCCCChhhHHHHHhCCCCCCCCccccccCCCccccCCC-
Q psy1860          24 STLKGLQYQPLFPYFKHVTSAFRVLTDTYVTEESGTGVVHQAPYFGEDDYRVCLAGGVITRDQEIVCPVDASGCFTAPV-  102 (659)
Q Consensus        24 ~~l~g~~~~~p~~~~~~~~~~~pi~~~~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~l~~~~~~~~~~vd~~G~~~~~~-  102 (659)
                      ++|+|++|.+|+.     ++.+||++++||++++|||+||+|||||++||++|++|||     ++++++|++|++++++ 
T Consensus       236 ~~l~G~~~~~P~~-----~~~ipii~~~~V~~~~GTG~V~~~Pahd~~D~~~~~~~~L-----~~~~~id~~G~~~~~~~  305 (862)
T 1gax_A          236 RHLLGKRARIPLT-----EVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGL-----KPVSVINLEGRMEGERV  305 (862)
T ss_dssp             CSCTTCCCBCTTC-----CCBCCEEECTTCCTTSSSSEEECCGGGCHHHHHHHHHTTC-----CCCCSBCTTSBBCSSSS
T ss_pred             HHHcCCEEECCCC-----CCeeeEEeccccccCCCCcceEecCCCCchHHHHHHHcCC-----CccceeCCCCccccccC
Confidence            5799999999985     5689999999999999999999999999999999999999     8999999999999998 


Q ss_pred             -ccccCcccccCchHHHHHHHhcCCEeEeecccccCCccccCCCcEEEcccCceeeechHhHHHHHHhc--CCceEecCc
Q psy1860         103 -SHFLGLYVKDADKPIIKHLKEQSRLVSAGSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCN--SDTYWVPEF  179 (659)
Q Consensus       103 -~~~~g~~v~~a~~~ii~~L~~~g~l~~~~~~~h~~p~~~r~g~~v~~~~~~qwFi~~~~~k~~~~~~~--~~~~~~P~~  179 (659)
                       |+|.|+++++||++|+++|++.|++.+.++++|+||||||||+||++++++||||+++++++++++++  ++++|+|++
T Consensus       306 ~g~~~Gl~~~~a~~~iv~~L~~~g~l~~~~~~~h~~p~c~R~~~~i~~~~~~qWFv~~~~~~~~~l~~v~~~~~~~~P~~  385 (862)
T 1gax_A          306 PEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWLRMRPLAEEVLKGLRRGDIAFVPER  385 (862)
T ss_dssp             CTTTSSSBSSHHHHHHHHHHHTTTCEEEEEEEEECCEEETTTCSBCCEEECCEEEECHHHHHHHHHHHHHHTCCEESSSH
T ss_pred             CcccCCcCHHHHHHHHHHHHHhCCCeeeeccccccCCeecCCCCeEEEEecceEEEEhHHHHHHHHHHHHcCCceEcCHH
Confidence             99999999999999999999999999999999999999999999999999999999999999999997  479999999


Q ss_pred             ccchhhhhhhcCCCceEeeeccCCCccccEEEeCCCCeEEEeccHHHHHHhhCCccccccccccccccccCCCCCCCCCc
Q psy1860         180 VKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRPGKPPL  259 (659)
Q Consensus       180 ~~~~~~~~~l~~l~Dw~ISRqr~WG~piP~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~~~  259 (659)
                      . ++++.+||++++||||||||+||||||+|+|++|+. +|++..+++..               +...||  .||...+
T Consensus       386 ~-~~~~~~wl~~l~DW~ISRqr~WG~pIP~w~~~~~~~-i~v~~~~~l~~---------------~~~~~~--~~g~~~~  446 (862)
T 1gax_A          386 W-KKVNMDWLENVKDWNISRQLWWGHQIPAWYCEDCQA-VNVPRPERYLE---------------DPTSCE--ACGSPRL  446 (862)
T ss_dssp             H-HHHHHHHHHTCCCCCCBCCCSSSCCCCCEEETTTCC-EECCCGGGTTC---------------CCCSCT--TTCCSCE
T ss_pred             H-HHHHHHHHhcccceeEecccCCCcccCceecCCCCE-EEEeccccccc---------------cchhhh--hcCchhe
Confidence            8 589999999999999999999999999999988765 55665443210               001232  3466689


Q ss_pred             cccccccceeccCCCCccccccCCCCCcccccccCCcceEeeccccchhHHHHHHHHHhhhcCCCCCCeEEEeceeecCC
Q psy1860         260 RRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANGLVLAQD  339 (659)
Q Consensus       260 ~~~~dvlDvWfdS~~~~~~~~~~~~~~~~~~~~~~p~d~~~~G~D~~~~w~~~~ll~~~~~~~~~p~k~v~~hG~v~~~~  339 (659)
                      +|++||||||||||++|+++++||. ++++|++|||+|+|++|+||+|||++++++++++++|+.||++|++||+|+|.+
T Consensus       447 ~r~~DvlDtWfdS~~~~~~~~~~p~-~~~~~~~~~P~d~~v~G~Dii~~W~a~~~~~~~~~~g~~Pfk~v~~hG~vld~~  525 (862)
T 1gax_A          447 KRDEDVFDTWFSSALWPLSTLGWPE-ETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEK  525 (862)
T ss_dssp             EECCCCBCHHHHHTSCTTGGGTTTS-CCHHHHHSCSBSCEEEEGGGTTTTHHHHHHHHHHHSSSCSBSEEEEECCEECTT
T ss_pred             ecCCcccceeeccCCcchhhccCCC-chHHHHhhCCceEEecCccccccHHHHHHHHHHHhcCCCcccEEEEeeeEEcCC
Confidence            9999999999999999999999994 556899999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCCCCCCCCcCCCchhhhhhcccccccccccCCCCCccccCcccccccCchhhhHHHHHHHHHHHHHhcc
Q psy1860         340 GQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVHVWEPVHVWSVCLILKEKVLLAND  419 (659)
Q Consensus       340 G~KMSKS~GN~i~p~~~i~~y~gaD~lR~~l~~~~msk~~~~~~~~~~~~~~d~~f~lw~~~~~~~~~~~~~~l~~l~n~  419 (659)
                      |+|||||+||||+|.+++++| |||++|||+         ++.+++    ++|++|+   .+.+++.++++++++++...
T Consensus       526 G~KMSKSlGNvIdP~dli~~y-GaDalR~~l---------l~~~~~----~~D~~fs---~~~l~~~~~f~nkl~N~~rf  588 (862)
T 1gax_A          526 GQKMSKSKGNVIDPLEMVERY-GADALRFAL---------IYLATG----GQDIRLD---LRWLEMARNFANKLYNAARF  588 (862)
T ss_dssp             SCBCCTTTTCCCCHHHHHHHH-CHHHHHHHH---------HHHCCT----TCCEECC---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccccCCCCCCHHHHHHHc-ChHHHHHHH---------HhcCCC----CCCCccC---HHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999 999999999         765455    9999999   68889999999998544322


Q ss_pred             chhh-cccccccccCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH-HHHHHHHHHHccccccCCCChHhH
Q psy1860         420 AEEK-LSFQYNEAEGSTNIMDAWIISFSESLIEFVRKEMAAYRLYTVVPRLVLFI-DNLTNWYVRMNRRRLKGEGGPADC  497 (659)
Q Consensus       420 ~~~~-~~~~~~~~~~~~~~~d~~il~~l~~~~~~~~~~~e~~~~~~a~~~l~~f~-~~~~~~Yle~~K~~l~~~~~~~~~  497 (659)
                      .... .++...  ....+..|+|++++++++++.++++|++|+|+.|++.+++|+ +++||||++++|+|++++     +
T Consensus       589 ~~~~~~~~~~~--~~~~~~~D~~il~~l~~~~~~v~~a~e~~~f~~A~~~l~~f~~~~~~n~Yie~~k~~l~~~-----~  661 (862)
T 1gax_A          589 VLLSREGFQAK--EDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAKPALKAG-----N  661 (862)
T ss_dssp             HHHHSSSCCCC--BCCCCHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTTHHHHHHHHHHTT-----B
T ss_pred             HHhcccCCCCc--cccCCHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhHHHHHHcchhhhcc-----H
Confidence            1110 011110  123578899999999999999999999999999999999999 579999999999998764     3


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHhhhhcCCCCCCceeccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy1860         498 KVALNSLTKVLFTMVRVMAPYTPFLCEHLYQNLRHLTGRLERSIHFIMMPQPNRGIIDQEIERSVKRMQSVVELGRVIRE  577 (659)
Q Consensus       498 ~~~~~~l~~~l~~~~~lL~P~~P~~aEeiw~~L~~~~~~~~~sv~~~~~P~~~~~~~d~~~e~~~~~~~~~i~~~r~~r~  577 (659)
                      .+++.+++++++.+++||||||||+||+||+.|+.     .+|||.+.||.++  ..|+.++..++.++++++.+|++|+
T Consensus       662 ~~~~~~l~~~l~~~~~lL~P~~P~~aEeiw~~L~~-----~~sv~~~~wP~~~--~~d~~~~~~~~~~~~v~~~~r~~r~  734 (862)
T 1gax_A          662 AHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALTG-----KEELALEAWPEPG--GRDEEAERAFEALKQAVTAVRALKA  734 (862)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHC-----CSCGGGSCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCC-----CCeEEecCCCCCC--cCCHHHHHHHHHHHHHHHHHHHhhh
Confidence            56778999999999999999999999999999972     5699999999987  2689999999999999999999999


Q ss_pred             HcCCCCCCCceeEEEEcCCHHHHHHHHHHHHHHHhHhCcccEE--------EEeCCceeEEEecccCCHHHHHHHHHhhH
Q psy1860         578 RVTIPIKYPLREAVVIHNDAQCLQEIRTLESYILQELNVRTVT--------FSTDKQKYGVSLRAEPDHKTLGARLKTAF  649 (659)
Q Consensus       578 ~~~i~~~~pl~~~~~~~~d~~~~~~l~~l~~~I~~l~nv~~v~--------~~~~~~~~~v~l~~~~d~~~~~~rl~k~~  649 (659)
                      +.+++.+.|+...+ .  + .. +.++.+.++|+.++|++++.        ...+..++.+++.+.+|++++++||+|++
T Consensus       735 ~~~i~~~~~~~~~v-~--~-~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~rl~k~~  809 (862)
T 1gax_A          735 EAGLPPAQEVRVYL-E--G-ET-APVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRL  809 (862)
T ss_dssp             HHTCCTTCCEEEEE-E--E-SC-HHHHHTHHHHHHHHCEEECSSCCSSEEEEECSSEEEEEECCSCCCHHHHHHHHHHHH
T ss_pred             hhcCCCCCeeEEEE-e--C-hH-HHHHHHHHHHHHHhCccccccccccceEEecCCcEEEEEeccccCHHHHHHHHHHHH
Confidence            99999999987433 2  2 22 56777888999999987662        12344566789999999999999999999


Q ss_pred             HHHHHHHhh
Q psy1860         650 KPITQAIKV  658 (659)
Q Consensus       650 ~~~~~~~~~  658 (659)
                      +++++++++
T Consensus       810 ~~~~~~~~~  818 (862)
T 1gax_A          810 KELLALAER  818 (862)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999875
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 659
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 4e-52
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 2e-40
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 8e-34
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 7e-21
d1ilea1180 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (Il 3e-17
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 7e-17
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 9e-14
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 5e-11
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 4e-08
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 2e-06
d1ivsa2218 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) 1e-06
d1ffya1273 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (Il 6e-05
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-04
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 2e-04
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 8e-04
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Thermus thermophilus [TaxId: 274]

 Score =  184 bits (467), Expect = 4e-52
 Identities = 98/221 (44%), Positives = 134/221 (60%)

Query: 135 HSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVPEFVKEKRFGNWLREARD 194
             YP CWR  TPL+Y A  SWFI+      +L++ N + +WVP  +KE R+G WL+   D
Sbjct: 195 LGYPHCWRCSTPLMYYATESWFIKNTLFKDELIRNNQEIHWVPPHIKEGRYGEWLKNLVD 254

Query: 195 WAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRLSGISVEKDLHRESVDSVTIPSVRP 254
           WA+SRNRYWGTP+P+WV     +   +GS  EL   +   + +           +     
Sbjct: 255 WALSRNRYWGTPLPIWVCQACGKEEAIGSFQELKARATKPLPEPFDPHRPYVDQVELACA 314

Query: 255 GKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLL 314
               +RRVP V D W++SG+MP+A LH+PF++   F + FPADFIAEGIDQTRGWF +L 
Sbjct: 315 CGGTMRRVPYVIDVWYDSGAMPFASLHYPFEHEEVFRESFPADFIAEGIDQTRGWFNSLH 374

Query: 315 VISTALFKQAPFRNLIANGLVLAQDGQKMSKSKRNYPDPME 355
            +   LF    F+N+I +GL+L + GQKMSKSK N  DP +
Sbjct: 375 QLGVMLFGSIAFKNVICHGLILDEKGQKMSKSKGNVVDPWD 415
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 180 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 218 Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 273 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query659
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.97
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.94
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.94
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.93
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.93
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.93
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.92
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.92
d1ffya1273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.91
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.86
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.81
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.72
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.46
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.29
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.2
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.2
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.05
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 97.1
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 96.27
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 96.08
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 95.72
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 94.84
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 93.63
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 92.0
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 88.77
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 83.99
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=1.2e-49  Score=432.80  Aligned_cols=262  Identities=26%  Similarity=0.488  Sum_probs=212.2

Q ss_pred             cCchHHHHHHHhcCCEeEe--------------ecccccCCccccCCCcEEEcccCceeeechHhHHHHHHhcCCceEec
Q psy1860         112 DADKPIIKHLKEQSRLVSA--------------GSVKHSYPFCWRSDTPLIYKAVPSWFIRVQHMNQDLLKCNSDTYWVP  177 (659)
Q Consensus       112 ~a~~~ii~~L~~~g~l~~~--------------~~~~h~~p~~~r~g~~v~~~~~~qwFi~~~~~k~~~~~~~~~~~~~P  177 (659)
                      ++...++..|.++|+++..              .+.++.||+|+||++|++++.++|||+++..+++.+++.++.+.+.|
T Consensus       161 ~~v~~~f~~l~~~G~iy~~~~~v~~~p~~~~~~~~~e~~~~~~~r~~~~~~~~~~~qwf~~~~~~~~~~~~~~~~~~~~~  240 (450)
T d1ffya3         161 AAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKV  240 (450)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECCGGGEEEEEETTTCCBCEEEEEEEEEECHHHHHHHHHHHHHTSEESS
T ss_pred             HHHHHHHHHHHHcCCeeccccccccccccCcccccccccccccccccCCceeeccccceeccccccccchhhcccccccc
Confidence            4567889999999999863              34466789999999999999999999999999999999999999999


Q ss_pred             CcccchhhhhhhcCCCceEeeeccCCCccccEEEeCCCCeEEEeccHHHHHHh---hCCcccccc-ccccccccccCCCC
Q psy1860         178 EFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDGEEIVCVGSIAELHRL---SGISVEKDL-HRESVDSVTIPSVR  253 (659)
Q Consensus       178 ~~~~~~~~~~~l~~l~Dw~ISRqr~WG~piP~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~-~~~~~d~~~~~~~~  253 (659)
                      +.. +.++..|+++++||||||||+||+|+|+|+|.+++.+........+.+.   .+....... ....... .+....
T Consensus       241 ~~~-~~~~~~~~~~~~Dw~iSRqr~WG~piP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  318 (450)
T d1ffya3         241 NWG-KTRIYNMVRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPE-GFTHPG  318 (450)
T ss_dssp             HHH-HHHHHHHHHHCCCEECEESCSSSCBCCCEECTTSCEECCHHHHHHHHHHHHHHCTHHHHHSCHHHHSST-TCCCSS
T ss_pred             ccc-ceeeeccccCccchheeeecccccCcceeecCCCCEecchhhhHHHHHhhhhcCccccccccccccccc-cccccC
Confidence            987 4789999999999999999999999999999887655443333322222   222111000 0000000 011111


Q ss_pred             CCCCCccccccccceeccCCCCccccccCCCCCcccccccCCcceEeeccccchhHHHHHHHHHhhhcCCCCCCeEEEec
Q psy1860         254 PGKPPLRRVPEVFDCWFESGSMPYAQLHFPFDNRRDFDDRFPADFIAEGIDQTRGWFYTLLVISTALFKQAPFRNLIANG  333 (659)
Q Consensus       254 ~g~~~~~~~~dvlDvWfdS~~~~~~~~~~~~~~~~~~~~~~p~d~~~~G~D~~~~w~~~~ll~~~~~~~~~p~k~v~~hG  333 (659)
                      ...+.+.+++||+|+||||++++++.+.++      +..+||+|++++|+||+||||+++++.++++++..||++|++||
T Consensus       319 ~~~~~~~~~~dvld~wfds~~~~~~~~~~~------~~~~~P~d~~~~G~Di~r~w~~~~~~~~~~~~~~~Pfk~v~~hG  392 (450)
T d1ffya3         319 SPNGTFTKETDIMDVWFDSGSSHRGVLETR------PELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHG  392 (450)
T ss_dssp             CTTSCCEECCCEECHHHHHHTHHHHTTTTS------TTCCSSBSEEEEEGGGGTTHHHHHHHHHHHHHSSCSBSEEEEEC
T ss_pred             CCCCcceeeeeeeccccccccccccccccc------ccccCCCcccccCcchhhHHHHHHHHHHHHhcCCCCcceEEEcc
Confidence            123568999999999999999887766543      34679999999999999999999999999999999999999999


Q ss_pred             eeecCCCCccccCCCCCCCCCCCCCcCCCchhhhhhcccccccccccCCCCCccccCcccccc
Q psy1860         334 LVLAQDGQKMSKSKRNYPDPMEPPFKNLIANGLVLSSDGQKMSKSKKNYPDPMEVRGRLCPVH  396 (659)
Q Consensus       334 ~v~~~~G~KMSKS~GN~i~p~~~i~~y~gaD~lR~~l~~~~msk~~~~~~~~~~~~~~d~~f~  396 (659)
                      ||+|.+|+|||||+||+|+|.+++++| |||+||||+         +++ ++    ++|++|+
T Consensus       393 ~vld~~G~KMSKS~GN~I~p~dii~~y-GaDalR~~l---------~s~-~~----~~D~~fs  440 (450)
T d1ffya3         393 FVMDGEGKKMSKSLGNVIVPDQVVKQK-GADIARLWV---------SST-DY----LADVRIS  440 (450)
T ss_dssp             CEECTTSCCCCSSSSCCCCHHHHHHHT-CHHHHHHHH---------HTS-CT----TSCEECC
T ss_pred             eEECCCCCCCCCCCCCCcCHHHHHHHh-CcHHHHHHH---------HcC-CC----CCCcCcC
Confidence            999999999999999999999999999 999999999         754 45    8999999
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure