Psyllid ID: psy1893

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MDSRQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MDSRQTEDAAAVLSVLVAGSCmgltlytgshipdavgsFLVGGILGCVAYFIVSSNIEalvgrsipDDYLAQKMLLQS
Flexible Loop (DISEMBL)
MDSRQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS
Low Complexity Region (SEG)
MDSRQTEDaaavlsvlvaGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS
Disordered region (IsUnstruct)
*********AAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLA*******
Disordered Region (DISOPRED)
****QTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQ*
Disordered Region (DISEMBL)
*********AAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS
Disordered Region (DISPRO)
*****TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQK*****
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSRQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q6DCE3	559	Zinc transporter 9 OS=Xen	N/A	N/A	0.923	0.128	0.520	1e-12
Q5PQZ3	573	Zinc transporter 9 OS=Dan	yes	N/A	0.858	0.116	0.514	9e-12
Q5IRJ6	567	Zinc transporter 9 OS=Mus	yes	N/A	0.923	0.126	0.493	1e-11
Q5R4H0	569	Zinc transporter 9 OS=Pon	yes	N/A	0.756	0.103	0.542	1e-11
Q6PML9	568	Zinc transporter 9 OS=Hom	yes	N/A	0.756	0.103	0.542	1e-11
Q8H1G3	457	Metal tolerance protein C	yes	N/A	0.858	0.146	0.388	0.0004

>sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis GN=slc30a9 PE=2 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/73 (52%), Positives = 52/73 (71%), Gaps = 1/73 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
           EDAAAVL +++A SCMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 387 EDAAAVLGLVMAASCMGLTSLTGNPLYDSLGSLGVGTLLGAVSAFLIYTNTEALIGRSIQ 446

Query: 66  PDDYLAQKMLLQS 78
           PD       LL+S
Sbjct: 447 PDQVQRLTELLES 459

Plays a role as nuclear receptor coactivator.
Xenopus laevis (taxid: 8355)

>sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a9 PE=2 SV=1

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 50/68 (73%), Gaps = 1/68 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAVL V++A  CMGLT  TG+   D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 401 EDAAAVLGVVLAAGCMGLTSLTGNPYYDSLGSLGVGTLLGTVSAFLIYTNTEALLGRSIQ 460

Query: 67  DDYLAQKM 74
            +++ QK+
Sbjct: 461 AEHM-QKL 467

Plays a role as nuclear receptor coactivator.

Danio rerio (taxid: 7955)

>sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30a9 PE=1 SV=2

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct: 395 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 454

Query: 66  PDDYLAQKMLLQS 78
           P+       LL+S
Sbjct: 455 PEQVQRLTELLES 467

Plays a role in the p160 coactivator signaling pathway that mediates transcriptional activation by nuclear receptors. Plays a role in transcriptional activation of Wnt-responsive genes.

Mus musculus (taxid: 10090)

>sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30A9 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI
Sbjct: 397 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSI 455

Plays a role in the p160 coactivator signaling pathway that mediates transcriptional activation by nuclear receptors. Plays a role in transcriptional activation of Wnt-responsive genes.

Pongo abelii (taxid: 9601)

>sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1 SV=1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           ED AAVL V++A +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI
Sbjct: 396 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSI 454

Plays a role in the p160 coactivator signaling pathway that mediates transcriptional activation by nuclear receptors (By similarity). Plays a role in transcriptional activation of Wnt-responsive genes.

Homo sapiens (taxid: 9606)

>sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2 SV=1

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 42/67 (62%)

Query: 6   TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI 65
           TED AAV  + +A + +     TG+ I D +GS +VG +LG VA F++  N  AL+GR++
Sbjct: 272 TEDGAAVAGLAIAAASLVAVRMTGNPIYDPIGSIVVGNLLGMVAIFLIQRNRHALIGRAM 331

Query: 66  PDDYLAQ 72
            D  +++
Sbjct: 332 DDQDMSK 338

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
242005849	761	conserved hypothetical protein [Pediculu	0.820	0.084	0.593	3e-14
195148950	635	GL11076 [Drosophila persimilis] gi|19410	0.846	0.103	0.606	1e-13
198455734	635	GA21223 [Drosophila pseudoobscura pseudo	0.846	0.103	0.606	1e-13
193608379	547	PREDICTED: zinc transporter 9-like isofo	0.820	0.117	0.640	2e-13
194756522	635	GF13401 [Drosophila ananassae] gi|190621	0.846	0.103	0.606	2e-13
321458965	439	hypothetical protein DAPPUDRAFT_113099 [	0.846	0.150	0.606	5e-13
198434361	544	PREDICTED: similar to solute carrier fam	0.884	0.126	0.563	8e-13
260806579	868	hypothetical protein BRAFLDRAFT_82946 [B	0.384	0.034	0.573	1e-12
195485251	655	GE12486 [Drosophila yakuba] gi|194177115	0.846	0.100	0.575	2e-12
194883568	657	GG20327 [Drosophila erecta] gi|190659060	0.846	0.100	0.575	2e-12

>gi|242005849|ref|XP_002423772.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212506988|gb|EEB11034.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/64 (59%), Positives = 47/64 (73%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           ED AAV+ V  A  CMGL+ Y  SH+PDA+GSF VGG+L  VA FI+ +N+ ALVGRSIP
Sbjct: 589 EDMAAVIGVSFAAGCMGLSSYFESHVPDAIGSFFVGGLLAGVASFIIYTNVAALVGRSIP 648

Query: 67  DDYL 70
            + L
Sbjct: 649 QERL 652

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195148950|ref|XP_002015425.1| GL11076 [Drosophila persimilis] gi|194109272|gb|EDW31315.1| GL11076 [Drosophila persimilis]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 49/66 (74%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAV  V+VAG+CMGL+ YTGS I DA GS ++GG+LG VA FI+ +N  ALVG SI 
Sbjct: 463 EDAAAVTGVIVAGTCMGLSSYTGSPIFDAAGSLVIGGLLGAVASFIIYTNANALVGVSIS 522

Query: 67  DDYLAQ 72
            D L +
Sbjct: 523 TDRLEK 528

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198455734|ref|XP_001360090.2| GA21223 [Drosophila pseudoobscura pseudoobscura] gi|198135373|gb|EAL24664.2| GA21223 [Drosophila pseudoobscura pseudoobscura]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 49/66 (74%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAV  V+VAG+CMGL+ YTGS I DA GS ++GG+LG VA FI+ +N  ALVG SI 
Sbjct: 463 EDAAAVTGVIVAGTCMGLSSYTGSPIFDAAGSLVIGGLLGAVASFIIYTNANALVGVSIS 522

Query: 67  DDYLAQ 72
            D L +
Sbjct: 523 TDRLEK 528

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193608379|ref|XP_001943211.1| PREDICTED: zinc transporter 9-like isoform 1 [Acyrthosiphon pisum] gi|193608381|ref|XP_001943270.1| PREDICTED: zinc transporter 9-like isoform 2 [Acyrthosiphon pisum]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/64 (64%), Positives = 46/64 (71%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           ED AAVLS+ VA  CM LT Y  + IPDAVGS LVGGILG VA FI+ +N  A+VGRSI 
Sbjct: 375 EDCAAVLSIGVAAVCMSLTSYLNTPIPDAVGSLLVGGILGTVASFIIYTNTSAIVGRSIS 434

Query: 67  DDYL 70
             YL
Sbjct: 435 LTYL 438

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194756522|ref|XP_001960526.1| GF13401 [Drosophila ananassae] gi|190621824|gb|EDV37348.1| GF13401 [Drosophila ananassae]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 49/66 (74%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAV  V+VAG+CMGL+ YTGS I DAVGS ++GG+LG VA FI+ +N  ALVG SI 
Sbjct: 463 EDAAAVTGVIVAGTCMGLSSYTGSPIFDAVGSLIIGGLLGAVASFIIYTNANALVGISIA 522

Query: 67  DDYLAQ 72
              L +
Sbjct: 523 SQRLEK 528

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321458965|gb|EFX70024.1| hypothetical protein DAPPUDRAFT_113099 [Daphnia pulex]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 47/66 (71%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           ED AAVL V+VAGSCM +  +  S IPDA+GS LVG +LG VA FI+ SN  ALVGRSIP
Sbjct: 267 EDLAAVLGVMVAGSCMAVATHLNSPIPDAIGSLLVGIVLGAVASFIIYSNSAALVGRSIP 326

Query: 67  DDYLAQ 72
              + Q
Sbjct: 327 LSSIQQ 332

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198434361|ref|XP_002126481.1| PREDICTED: similar to solute carrier family 30 (zinc transporter), member 9 [Ciona intestinalis]

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 2/71 (2%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           ED+AAV+ V +AGS + LT YTG+ + DAVGS ++GG+LG VA F+V+SN  AL+GRSIP
Sbjct: 372 EDSAAVMGVGIAGSAIALTYYTGNVLFDAVGSIMIGGLLGGVATFLVTSNANALIGRSIP 431

Query: 67  DDYLA--QKML 75
              L   Q+ML
Sbjct: 432 PSRLEELQEML 442

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260806579|ref|XP_002598161.1| hypothetical protein BRAFLDRAFT_82946 [Branchiostoma floridae] gi|229283433|gb|EEN54173.1| hypothetical protein BRAFLDRAFT_82946 [Branchiostoma floridae]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 50/68 (73%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAVL V +A +CMGLT  TG+ I DAVGS  +GG+L  V+ F++ +N EAL+GRSIP
Sbjct: 302 EDAAAVLGVAIAATCMGLTSLTGNPIYDAVGSITIGGLLAMVSAFLIYTNAEALIGRSIP 361

Query: 67  DDYLAQKM 74
            D L + M
Sbjct: 362 PDQLDRIM 369

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|195485251|ref|XP_002091014.1| GE12486 [Drosophila yakuba] gi|194177115|gb|EDW90726.1| GE12486 [Drosophila yakuba]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 48/66 (72%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAV  V+VAG+CMGL+ YTGS I DA GS ++G +LG VA FI+ +N  ALVG SI 
Sbjct: 483 EDAAAVTGVMVAGACMGLSSYTGSPIFDAAGSLVIGALLGAVASFIIYTNANALVGISIA 542

Query: 67  DDYLAQ 72
            + L +
Sbjct: 543 SERLEK 548

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194883568|ref|XP_001975873.1| GG20327 [Drosophila erecta] gi|190659060|gb|EDV56273.1| GG20327 [Drosophila erecta]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 48/66 (72%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
           EDAAAV  V+VAG+CMGL+ YTGS I DA GS ++G +LG VA FI+ +N  ALVG SI 
Sbjct: 485 EDAAAVTGVMVAGACMGLSSYTGSPIFDAAGSLVIGALLGAVASFIIYTNANALVGISIA 544

Query: 67  DDYLAQ 72
            + L +
Sbjct: 545 SERLEK 550

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
RGD|1593180	567	Slc30a9 "solute carrier family	0.923	0.126	0.438	9.5e-09
FB|FBgn0033762	660	CG8632 [Drosophila melanogaste	0.820	0.096	0.468	1.2e-08
UNIPROTKB|F1NWL2	472	SLC30A9 "Uncharacterized prote	0.910	0.150	0.432	5.2e-08
UNIPROTKB|B5U335	566	SLC30A9 "Solute carrier family	0.923	0.127	0.410	1.1e-07
MGI|MGI:1923690	567	Slc30a9 "solute carrier family	0.923	0.126	0.410	1.4e-07
UNIPROTKB|F1PHJ0	534	SLC30A9 "Uncharacterized prote	0.923	0.134	0.397	2.2e-07
UNIPROTKB|F1MDV2	566	SLC30A9 "Uncharacterized prote	0.923	0.127	0.397	2.4e-07
UNIPROTKB|Q6PML9	568	SLC30A9 "Zinc transporter 9" [	0.923	0.126	0.397	3e-07
ZFIN|ZDB-GENE-040724-254	573	slc30a9 "solute carrier family	0.858	0.116	0.411	3.1e-07
WB|WBGene00022174	495	Y71H2AM.9 [Caenorhabditis eleg	0.846	0.133	0.371	1.3e-05

RGD|1593180 Slc30a9 "solute carrier family 30 (zinc transporter), member 9" [Rattus norvegicus (taxid:10116)]

 Score = 141 (54.7 bits), Expect = 9.5e-09, P = 9.5e-09
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++S+NIEAL+GRSI 
Sbjct:   395 EDTAAVLGVMIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLISTNIEALLGRSIQ 454

Query:    66 PDDYLAQKMLLQS 78
             P+       LL+S
Sbjct:   455 PEQVQRLTELLES 467

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005856 "cytoskeleton" evidence=IEA;ISO

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA;ISO

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA;ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

FB|FBgn0033762 CG8632 [Drosophila melanogaster (taxid:7227)]

 Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 30/64 (46%), Positives = 38/64 (59%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
             ED           +CMGL+ YTGS I DA GS ++G +LG VA FI+ +N  ALVG SI 
Sbjct:   488 EDAAAVTGVMVAAACMGLSSYTGSPIFDAAGSLVIGALLGAVASFIIYTNANALVGISIA 547

Query:    67 DDYL 70
              + L
Sbjct:   548 SERL 551

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NWL2 SLC30A9 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 133 (51.9 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 32/74 (43%), Positives = 45/74 (60%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
             ED           +CMGLT  TG+   D+VGS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   300 EDAAAVLSVAVAATCMGLTSLTGNPYYDSVGSLGVGTLLGTVSAFLIYTNTEALLGRSIQ 359

Query:    67 DDYLAQKM--LLQS 78
              + L Q++  LL+S
Sbjct:   360 PEQL-QRLTELLES 372

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|B5U335 SLC30A9 "Solute carrier family 30 member 9" [Sus scrofa (taxid:9823)]

 Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 30/73 (41%), Positives = 43/73 (58%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   394 EDTAAVLGVIIAATCMGLTSVTGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 453

Query:    66 PDDYLAQKMLLQS 78
             PD       LL++
Sbjct:   454 PDQVQRLTELLEN 466

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1923690 Slc30a9 "solute carrier family 30 (zinc transporter), member 9" [Mus musculus (taxid:10090)]

 Score = 130 (50.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 30/73 (41%), Positives = 43/73 (58%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   395 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 454

Query:    66 PDDYLAQKMLLQS 78
             P+       LL+S
Sbjct:   455 PEQVQRLTELLES 467

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005856 "cytoskeleton" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IPI

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IGI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|F1PHJ0 SLC30A9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 128 (50.1 bits), Expect = 2.2e-07, P = 2.2e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   362 EDTAAVLGVTIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 421

Query:    66 PDDYLAQKMLLQS 78
             P+       LL++
Sbjct:   422 PEQVQRLTELLEN 434

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1MDV2 SLC30A9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 128 (50.1 bits), Expect = 2.4e-07, P = 2.4e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   394 EDTAAVLGVTIAATCMGLTSITGNPLYDSLGSLGVGTLLGVVSAFLIYTNTEALLGRSIQ 453

Query:    66 PDDYLAQKMLLQS 78
             P+       LL++
Sbjct:   454 PEQVQRLTELLEN 466

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q6PML9 SLC30A9 "Zinc transporter 9" [Homo sapiens (taxid:9606)]

 Score = 127 (49.8 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSI- 65
             ED           +CMGLT  TG+ + D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   396 EDTAAVLGVIIAATCMGLTSITGNPLYDSLGSLGVGTLLGMVSAFLIYTNTEALLGRSIQ 455

Query:    66 PDDYLAQKMLLQS 78
             P+       LL++
Sbjct:   456 PEQVQRLTELLEN 468

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0003682 "chromatin binding" evidence=IEA

GO:0016922 "ligand-dependent nuclear receptor binding" evidence=IEA

GO:0030374 "ligand-dependent nuclear receptor transcription coactivator activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=NAS

GO:0006289 "nucleotide-excision repair" evidence=TAS

ZFIN|ZDB-GENE-040724-254 slc30a9 "solute carrier family 30 (zinc transporter), member 9" [Danio rerio (taxid:7955)]

 Score = 127 (49.8 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 28/68 (41%), Positives = 41/68 (60%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
             ED            CMGLT  TG+   D++GS  VG +LG V+ F++ +N EAL+GRSI 
Sbjct:   401 EDAAAVLGVVLAAGCMGLTSLTGNPYYDSLGSLGVGTLLGTVSAFLIYTNTEALLGRSIQ 460

Query:    67 DDYLAQKM 74
              +++ QK+
Sbjct:   461 AEHM-QKL 467

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006829 "zinc ion transport" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0005385 "zinc ion transmembrane transporter activity" evidence=ISS

WB|WBGene00022174 Y71H2AM.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 26/70 (37%), Positives = 37/70 (52%)

Query:     7 EDXXXXXXXXXXGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
             ED             + L+ +  S IPD  GS ++G +LG VA FI+ +N   LVGRS+P
Sbjct:   322 EDTAAVTGVGIALCAISLSSFLNSPIPDCCGSIVIGALLGTVASFIIRTNAAHLVGRSLP 381

Query:    67 ----DDYLAQ 72
                 DD +A+
Sbjct:   382 QRITDDIVAR 391

GO:0006812 "cation transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5PQZ3	ZNT9_DANRE	No assigned EC number	0.5147	0.8589	0.1169	yes	N/A
Q5R4H0	ZNT9_PONAB	No assigned EC number	0.5423	0.7564	0.1036	yes	N/A
Q6PML9	ZNT9_HUMAN	No assigned EC number	0.5423	0.7564	0.1038	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	78
pfam01545	273	pfam01545, Cation_efflux, Cation efflux family	8e-05

>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family

 Score = 38.4 bits (90), Expect = 8e-05
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 7   EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIP 66
                VL  L     + L L TG  I D + S L+  ++      ++  ++  L+G S  
Sbjct: 133 HALVDVLGSLAVLIGLLLILLTGLPIADPLASLLIALLILYTGLRLLKESLSELLGASPD 192

Query: 67  DDYLAQ 72
            + + +
Sbjct: 193 PELVDE 198

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
KOG2802|consensus	503		99.34
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	98.91
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	98.9
TIGR01297	268	CDF cation diffusion facilitator family transporte	98.87
PRK03557	312	zinc transporter ZitB; Provisional	98.78
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	98.15
KOG1485|consensus	412		97.86
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	97.33
KOG1484|consensus	354		96.52
PF07332	121	DUF1469: Protein of unknown function (DUF1469); In	90.16
PRK03557	312	zinc transporter ZitB; Provisional	88.79
TIGR01297	268	CDF cation diffusion facilitator family transporte	86.71
COG4956	356	Integral membrane protein (PIN domain superfamily)	86.43
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	84.93
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	83.88
PF05105	118	Phage_holin_4: Holin family ; InterPro: IPR006480	82.13

>KOG2802|consensus

Probab=99.34  E-value=6.6e-13  Score=104.56  Aligned_cols=59  Identities=39%  Similarity=0.576  Sum_probs=50.7

Q ss_pred             chhhhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy1893           3 SRQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVG   62 (78)
Q Consensus         3 ~V~~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiG   62 (78)
                      +|++||+||+.|+.||+.+++++.+||||+||+++||+||.||+.|--. +++-++--+|
T Consensus       361 vVl~EDtAAVtGv~IAaa~m~lss~tgnPIyD~~GSivvGaLLGmVe~d-iyDvK~~diG  419 (503)
T KOG2802|consen  361 VVLLEDTAAVTGVIIAAACMGLSSITGNPIYDSLGSIVVGALLGMVEND-IYDVKATDIG  419 (503)
T ss_pred             EEEecchHHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHh-hhhccceeec
Confidence            6899999999999999999999999999999999999999999998433 4444444444

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=98.91  E-value=5e-09  Score=78.59  Aligned_cols=65  Identities=12%  Similarity=0.135  Sum_probs=56.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893           8 DAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus         8 D~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      |....+|.   ++|+. +.++|+|+.|++++++|++++++.++.++|||.+.|+|+++|||..++|+++
T Consensus       159 D~~ts~~~---lvgl~-~~~~g~~~lD~i~a~~I~~~Il~~~~~~~~~s~~~L~d~~~~~~~~~~i~~~  223 (304)
T COG0053         159 DVLTSLAV---LVGLL-GSLLGWPWLDPLAALLISLYILKTGFRLFKESVNELMDAALDPEDLEKIRAI  223 (304)
T ss_pred             HHHHHHHH---HHHHH-HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHH
Confidence            44444544   44555 7788999999999999999999999999999999999999999999999875

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=98.90  E-value=1e-08  Score=75.64  Aligned_cols=67  Identities=22%  Similarity=0.325  Sum_probs=55.5

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893           6 TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus         6 ~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      ..|...-.+++++   +.++ ++|+|++|++++++||+++.+.++.+.|||.+.|+|+++|||..++|++.
T Consensus       155 ~~D~~~s~~vl~~---~~~~-~~g~~~~D~i~aiii~~~il~~~~~i~~~~~~~Ll~~~~~~~~~~~I~~~  221 (299)
T PRK09509        155 QSDVMMNGAILLA---LGLS-WYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDI  221 (299)
T ss_pred             HHHHHHHHHHHHH---HHHH-HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence            4566665554443   3333 46999999999999999999999999999999999999999999988864

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=98.87  E-value=1.1e-08  Score=72.99  Aligned_cols=69  Identities=14%  Similarity=0.154  Sum_probs=57.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHh
Q psy1893           6 TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKML   75 (78)
Q Consensus         6 ~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~   75 (78)
                      .++....++-+.+++|+.++.++ +|++|+++|++|++++.+.++.+.++|.+.|+|+++|++.++++++
T Consensus       131 ~~~~~D~~~s~~vli~~~~~~~~-~~~~D~l~~i~i~~~i~~~~~~l~~~~~~~Ll~~~~~~~~~~~i~~  199 (268)
T TIGR01297       131 LHVLSDALSSVGVLIGALLIYFG-WHWADPIAALLISLLILYTAFRLLKESINVLLDAAPDEEDLEEIKK  199 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccHHHHHH
Confidence            44455555556666666777666 8999999999999999999999999999999999998888887765

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>PRK03557 zinc transporter ZitB; Provisional

Probab=98.78  E-value=2.7e-08  Score=74.23  Aligned_cols=68  Identities=16%  Similarity=0.170  Sum_probs=55.5

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHh
Q psy1893           5 QTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKML   75 (78)
Q Consensus         5 ~~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~   75 (78)
                      ..+|....+|++++.   .+..+||+|++|++++++|++++.+.++.++|||..-|++++||++..+++++
T Consensus       160 ~~~D~l~s~~vlv~~---~~~~~~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Lld~~p~~~~~~~i~~  227 (312)
T PRK03557        160 VLGDLLGSVGAIIAA---LIIIWTGWTPADPILSILVSVLVLRSAWRLLKESVNELLEGAPVSLDIAELKR  227 (312)
T ss_pred             HHHHHHHHHHHHHHH---HHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHH
Confidence            467776666665544   44567999999999999999999999999999999999998887766666654

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=98.15  E-value=2.4e-07  Score=66.28  Aligned_cols=61  Identities=16%  Similarity=0.161  Sum_probs=50.2

Q ss_pred             HHHHHHHHHHHHhCCcc-chHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893          16 LVAGSCMGLTLYTGSHI-PDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus        16 ~iA~~gi~l~~~tG~p~-~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      +.++++..++..++++. +|+++|++|++.+.+.++.++|++.+.|+++++||+..+++++.
T Consensus       152 ~~v~i~~~~~~~~~~~~~~D~v~~l~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~  213 (284)
T PF01545_consen  152 LAVLISLLLAYLGPWFWYADPVASLLIALFILYSGYPLIKESIRILLDASPDPELVEKIRRI  213 (284)
T ss_dssp             STS-SSSTSSSTT-STS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccchhhhhHHHHHHhhhhhhchhhhhcccccccccccchhHHHHh
Confidence            44455566677777776 99999999999999999999999999999999999988888763

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>KOG1485|consensus

Probab=97.86  E-value=3.9e-05  Score=60.79  Aligned_cols=65  Identities=32%  Similarity=0.347  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893          11 AVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus        11 A~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      -++--.+|+++++++.+.. +++|+++++++.....++...=..+|..-|+|+++|||..+++..+
T Consensus       269 D~lTn~vaLva~~la~~~~-~~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~~a~pe~L~~~~~~  333 (412)
T KOG1485|consen  269 DVLTNSVALVAASLAYYYN-YWLDPIGAILVSTYIIYTGGRTGLENIKELVGRSAPPEYLEIITYL  333 (412)
T ss_pred             HHHHHHHHHHHHHHHHhhh-hcccchhhhhhheehhhhhhHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            3556678999999988876 9999999999999999999999999999999999999999988653

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=97.33  E-value=0.0014  Score=49.87  Aligned_cols=59  Identities=17%  Similarity=0.234  Sum_probs=48.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCH
Q psy1893           6 TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPD   67 (78)
Q Consensus         6 ~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~   67 (78)
                      ++|..--+|+++|..   +..+||+++.|++.|++|+++...-|+.+.||..+-|+-..|+.
T Consensus       163 l~D~Lgsv~vIia~i---~i~~~~w~~~Dpi~si~i~~lil~~a~~l~k~s~~iLle~~P~~  221 (296)
T COG1230         163 LGDALGSVGVIIAAI---VIRFTGWSWLDPILSIVIALLILSSAWPLLKESLNILLEGVPEG  221 (296)
T ss_pred             HHHHHHHHHHHHHHH---HHHHhCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence            466666666666554   55678999999999999999999999999999999999877733

>KOG1484|consensus

Probab=96.52  E-value=0.023  Score=44.51  Aligned_cols=64  Identities=17%  Similarity=0.064  Sum_probs=52.2

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCH
Q psy1893           4 RQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPD   67 (78)
Q Consensus         4 V~~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~   67 (78)
                      |++-=.|.++|-+--.+...+=+++|+.+.|++.|++|+++.....+=|.|+...-|+=+.||.
T Consensus       210 ifLHVLaDtlgSvGviist~Li~~~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~tPp~  273 (354)
T KOG1484|consen  210 IFLHVLADTLGSVGVIISTLLIKLFGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQRTPPH  273 (354)
T ss_pred             hhHHHHHHHhcchHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence            4444445555555555667788999999999999999999999999999999999999986544

>PF07332 DUF1469: Protein of unknown function (DUF1469); InterPro: IPR009937 This entry represents proteins found in hypothetical bacterial proteins where is is annotated as ycf49 or ycf49-like

Probab=90.16  E-value=3.4  Score=26.37  Aligned_cols=40  Identities=13%  Similarity=0.128  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHh
Q psy1893          36 VGSFLVGGILGCVAYFIVSSNIEALV-GRSIPDDYLAQKML   75 (78)
Q Consensus        36 iaSi~IG~lL~~vA~~L~~en~~lLi-Ges~~~e~~~~I~~   75 (78)
                      .+..+++.+...++..+..--++.+= ...++++..+++++
T Consensus        73 ~a~liv~~~~l~la~i~~~~~~~~l~~~~~~~~~t~~~l~~  113 (121)
T PF07332_consen   73 LAFLIVAGLYLLLALILLLIGRRRLRRAPPPFEETIAELKE  113 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            77778888888888877777777776 34555566666553

The function is not known.

>PRK03557 zinc transporter ZitB; Provisional

Probab=88.79  E-value=2.1  Score=32.03  Aligned_cols=55  Identities=16%  Similarity=0.102  Sum_probs=45.0

Q ss_pred             hHHHHHHHHHHHHHHHHHH-------hCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q psy1893           9 AAAVLSVLVAGSCMGLTLY-------TGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGR   63 (78)
Q Consensus         9 ~aA~~Gl~iA~~gi~l~~~-------tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGe   63 (78)
                      ..-++..++++.+..+++.       +|...+..+++.+.|+++..+++++++|....+...
T Consensus        55 l~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~~~~l~~~~~~i~~eai~~l~~~  116 (312)
T PRK03557         55 LTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEAIERFRTP  116 (312)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3445666777777777654       566689999999999999999999999999998764

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=86.71  E-value=3.8  Score=29.03  Aligned_cols=53  Identities=25%  Similarity=0.293  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHHHHH-------hCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q psy1893          11 AVLSVLVAGSCMGLTLY-------TGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGR   63 (78)
Q Consensus        11 A~~Gl~iA~~gi~l~~~-------tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGe   63 (78)
                      -++..++.+.+...++.       .|...++.+++++.|+++...++.+++|....+...
T Consensus        28 D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~si~~l~~~   87 (268)
T TIGR01297        28 DVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEAIERLINP   87 (268)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            34445566666666532       567788999999999999999999999999998853

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]

Probab=86.43  E-value=2.3  Score=33.51  Aligned_cols=59  Identities=7%  Similarity=0.058  Sum_probs=48.5

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy1893           4 RQTEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVG   62 (78)
Q Consensus         4 V~~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiG   62 (78)
                      +++--...++|+++|.....--...++|++-.+-++++-++|++.++.++-++++-++-
T Consensus        81 ilf~tiGLiiGLlia~l~~~pL~~~~ip~~~~ii~vi~t~il~y~G~~~~~k~~de~~~  139 (356)
T COG4956          81 ILFGTIGLIIGLLIAVLLSSPLFLLPIPFISTIIPVILTIILAYFGFQLADKKRDEFLR  139 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHhhCCccHHHhHHHHHHHHHHHHHhhHHhhhhhHHHHH
Confidence            34444556778888777776667899999999999999999999999999998887654

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=84.93  E-value=5.3  Score=30.11  Aligned_cols=55  Identities=13%  Similarity=0.225  Sum_probs=45.8

Q ss_pred             hhHHHHHHHHHHHHHHHH-------HHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy1893           8 DAAAVLSVLVAGSCMGLT-------LYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVG   62 (78)
Q Consensus         8 D~aA~~Gl~iA~~gi~l~-------~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiG   62 (78)
                      ...-++.-++.+.|+-++       |-.|......++|+++|+++.++++.+.+|....++.
T Consensus        48 s~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~sl~~~~~i~~~g~~i~~~a~~~~~~  109 (304)
T COG0053          48 SLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLASLIVSILIFAAGFEILLEAIKRLIS  109 (304)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            344455566777777776       5578889999999999999999999999999999997

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=83.88  E-value=5.7  Score=29.29  Aligned_cols=54  Identities=13%  Similarity=0.202  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHHHH-------HhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q psy1893          10 AAVLSVLVAGSCMGLTL-------YTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGR   63 (78)
Q Consensus        10 aA~~Gl~iA~~gi~l~~-------~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGe   63 (78)
                      .-++..++++.+..++.       -+|...+..+++++.|+++...++++++|....++..
T Consensus        48 ~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~esi~~l~~~  108 (299)
T PRK09509         48 VDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISP  108 (299)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            34566667777777765       3566689999999999999999999999999998853

>PF05105 Phage_holin_4: Holin family ; InterPro: IPR006480 This group of sequences describe one of the many mutually dissimilar families of holins, phage proteins that act together with lytic enzymes in bacterial lysis

Probab=82.13  E-value=11  Score=24.30  Aligned_cols=59  Identities=10%  Similarity=0.027  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhhhC
Q psy1893          17 VAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLLQS   78 (78)
Q Consensus        17 iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~~~   78 (78)
                      +.+.+..+....+.+ ...+...++......=... +-||.+.+ |-..|+...+.++.+|+
T Consensus        58 ~v~va~~~d~~~~~~-~~~~~~~~~~~~i~~E~~S-I~EN~~~~-G~~iP~~l~~~l~~l~~  116 (118)
T PF05105_consen   58 LVLVAHPIDIALGEN-GLPFRTLVIIFYILNELIS-ILENLAEM-GVPIPKWLKKFLKQLKD  116 (118)
T ss_pred             HHHHHHHHHHHHccC-chHHHHHHHHHHHHHHHHH-HHHHHHHh-CCCchHHHHHHHHHHhc
Confidence            344555566666666 4445544554444444333 45999876 98889999999998874

This family includes, besides phage holins, the protein TcdE/UtxA involved in toxin secretion in Clostridium difficile and related species []. This entry is represented by the Bacteriophage phi-29, Gp14 (holin). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	98.83
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	98.75
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	89.11
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	88.17

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=98.83  E-value=3.6e-10  Score=81.05  Aligned_cols=67  Identities=19%  Similarity=0.214  Sum_probs=56.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893           6 TEDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus         6 ~ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      ..|....+|+++++.+    .++|+|++|+++|++|++++.+.++.+.|||.+.|+|+++|++..++|++.
T Consensus       148 ~~D~~~s~~vli~~~~----~~~g~~~~D~i~~i~ia~~i~~~~~~l~~~s~~~Ll~~~~~~~~~~~i~~~  214 (283)
T 3h90_A          148 QSDVMMNGAILLALGL----SWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDI  214 (283)
T ss_dssp             HHHHCCCSCSCSSSCS----CSTTSCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH----HHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence            4566666666555432    478999999999999999999999999999999999999999999888764

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=98.75  E-value=1.6e-08  Score=73.84  Aligned_cols=50  Identities=22%  Similarity=0.275  Sum_probs=47.5

Q ss_pred             HhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHhh
Q psy1893          27 YTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRSIPDDYLAQKMLL   76 (78)
Q Consensus        27 ~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes~~~e~~~~I~~~   76 (78)
                      ++|+|++|+++|++|++++++.++.++|||.+.|+|+++|++.+++|++.
T Consensus       174 ~~g~~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~  223 (306)
T 3j1z_P          174 QYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLI  223 (306)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HhCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHH
Confidence            57999999999999999999999999999999999999999999998864

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=89.11  E-value=1.7  Score=31.10  Aligned_cols=57  Identities=12%  Similarity=0.167  Sum_probs=47.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHH-------hCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q psy1893           8 DAAAVLSVLVAGSCMGLTLY-------TGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGRS   64 (78)
Q Consensus         8 D~aA~~Gl~iA~~gi~l~~~-------tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGes   64 (78)
                      ...-++..++++.+...+..       +|......+++++.|+++..+++++.+|....++-..
T Consensus        48 sl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~~~~l~~~~~~i~~eai~~l~~p~  111 (306)
T 3j1z_P           48 SFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQSAFIMGSAFLLLFYGGERLLNPS  111 (306)
T ss_dssp             TTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhheecCC
Confidence            34566777888888888864       5777899999999999999999999999999888643

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=88.17  E-value=2.2  Score=29.86  Aligned_cols=56  Identities=13%  Similarity=0.194  Sum_probs=46.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHH-------hCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy1893           7 EDAAAVLSVLVAGSCMGLTLY-------TGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVG   62 (78)
Q Consensus         7 ED~aA~~Gl~iA~~gi~l~~~-------tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiG   62 (78)
                      ....-++..++++.+..++..       .|+..+..+++++.|+++..+++++.+|....++.
T Consensus        38 hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~eai~~l~~  100 (283)
T 3h90_A           38 DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGIQHLIS  100 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            344566777888888888765       46667899999999999999999999999988875

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d2qfia2	204	Ferrous-iron efflux pump FieF {Escherichia coli [T	96.28

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

Probab=96.28  E-value=7.7e-05  Score=49.33  Aligned_cols=53  Identities=25%  Similarity=0.251  Sum_probs=41.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q psy1893           7 EDAAAVLSVLVAGSCMGLTLYTGSHIPDAVGSFLVGGILGCVAYFIVSSNIEALVGR   63 (78)
Q Consensus         7 ED~aA~~Gl~iA~~gi~l~~~tG~p~~DgiaSi~IG~lL~~vA~~L~~en~~lLiGe   63 (78)
                      .|.....++++++   .+ .++|+|++|++++++|++++.+.++.+.|||.+.|++|
T Consensus       152 ~D~~~s~~vii~~---~~-~~~~~~~~D~i~aiii~~~i~~~~~~~~~~~~~~Lld~  204 (204)
T d2qfia2         152 SDVMMNGAILLAL---GL-SWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDR  204 (204)
T ss_dssp             HHTCCSSTTCCCT---TS-SCSSTTSSSSSSHHHHTTTTTTTTTTHHHHTGGGSSCC
T ss_pred             HHHHHHHHHHHHH---HH-HHhCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            3444444444432   22 35799999999999999999999999999999999875