Psyllid ID: psy1980

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Protein Sequence
MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS
Secondary Structure (PSIPRED)
ccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccc
Secondary Structure Prediction (SSPRO)
ccccEEEEccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcc
Coil and Loop (DISEMBL)
mpfvvrtvqpkflsrnnklldtagsplvkegelDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAhteefdpklvtvrfs
Flexible Loop (DISEMBL)
mpfvvrtvqpkflsrnnklldtagSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARlnahteefdpklvtvrfs
Low Complexity Region (SEG)
MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS
Disordered region (IsUnstruct)
***********FL****KLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSE*****************************
Disordered Region (DISOPRED)
MPFVVRTVQPKFL****************EGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVR**
Disordered Region (DISEMBL)
MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS
Disordered Region (DISPRO)
*PFVVRTVQPKFLSRNNK***TAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIxxxxxxxxxxxxxxxxxxxxxMARLNAHTEEFDPKLVTVRFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	100	2.2.26 [Sep-21-2011]
Q8BH43	497	Wiskott-Aldrich syndrome	yes	N/A	0.85	0.171	0.322	2e-07
Q9Y6W5	498	Wiskott-Aldrich syndrome	no	N/A	0.85	0.170	0.344	5e-07
A2VDK6	493	Wiskott-Aldrich syndrome	yes	N/A	0.85	0.172	0.333	2e-06
Q8R5H6	559	Wiskott-Aldrich syndrome	no	N/A	0.86	0.153	0.322	4e-06
Q5BJU7	559	Wiskott-Aldrich syndrome	no	N/A	0.86	0.153	0.322	4e-06
Q5NVG8	559	Wiskott-Aldrich syndrome	no	N/A	0.86	0.153	0.322	4e-06
Q0IIJ3	559	Wiskott-Aldrich syndrome	no	N/A	0.86	0.153	0.322	4e-06
Q92558	559	Wiskott-Aldrich syndrome	no	N/A	0.86	0.153	0.322	4e-06
Q8VHI6	501	Wiskott-Aldrich syndrome	no	N/A	0.84	0.167	0.307	0.0006
Q9UPY6	502	Wiskott-Aldrich syndrome	no	N/A	0.84	0.167	0.307	0.0006

>sp|Q8BH43|WASF2_MOUSE Wiskott-Aldrich syndrome protein family member 2 OS=Mus musculus GN=Wasf2 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 8/93 (8%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R ++P+ L R     DT+        EL+   N TL N ++QLGS+   A DIF 
Sbjct: 1  MPLVTRNIEPRHLCRQTLPSDTS--------ELECRTNITLANVIRQLGSLSKYAEDIFG 52

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          ++  +  A + + ++L  R+ R+     + DPK
Sbjct: 53 EICTQASAFASRVNSLAERVDRVQVKVTQLDPK 85

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.
Mus musculus (taxid: 10090)

>sp|Q9Y6W5|WASF2_HUMAN Wiskott-Aldrich syndrome protein family member 2 OS=Homo sapiens GN=WASF2 PE=1 SV=3

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R ++P+ L R          P V+  EL+ V N TL N ++QLGS+   A DIF 
Sbjct: 1  MPLVTRNIEPRHLCRQTL-------PSVR-SELECVTNITLANVIRQLGSLSKYAEDIFG 52

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  +    + +  +L  R+ RL     + DPK
Sbjct: 53 ELFTQANTFASRVSSLAERVDRLQVKVTQLDPK 85

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Homo sapiens (taxid: 9606)

>sp|A2VDK6|WASF2_BOVIN Wiskott-Aldrich syndrome protein family member 2 OS=Bos taurus GN=WASF2 PE=2 SV=1

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R ++P+ L R          P V+  EL+ + N TL N ++QLGS+   A DIF 
Sbjct: 1  MPLVTRNIEPRHLCRQTL-------PSVR-SELECMTNITLANVIRQLGSLSKYAEDIFG 52

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  +    + +  +L  R+ RL     + DPK
Sbjct: 53 ELFTQANTFASRVSSLAERVDRLQVKVTQLDPK 85

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Bos taurus (taxid: 9913)

>sp|Q8R5H6|WASF1_MOUSE Wiskott-Aldrich syndrome protein family member 1 OS=Mus musculus GN=Wasf1 PE=1 SV=2

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCHT-------ALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Mus musculus (taxid: 10090)

>sp|Q5BJU7|WASF1_RAT Wiskott-Aldrich syndrome protein family member 1 OS=Rattus norvegicus GN=Wasf1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCHT-------ALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Rattus norvegicus (taxid: 10116)

>sp|Q5NVG8|WASF1_PONAB Wiskott-Aldrich syndrome protein family member 1 OS=Pongo abelii GN=WASF1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCHT-------ALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Pongo abelii (taxid: 9601)

>sp|Q0IIJ3|WASF1_BOVIN Wiskott-Aldrich syndrome protein family member 1 OS=Bos taurus GN=WASF1 PE=2 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCHT-------ALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Bos taurus (taxid: 9913)

>sp|Q92558|WASF1_HUMAN Wiskott-Aldrich syndrome protein family member 1 OS=Homo sapiens GN=WASF1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCHT-------ALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.

Homo sapiens (taxid: 9606)

>sp|Q8VHI6|WASF3_MOUSE Wiskott-Aldrich syndrome protein family member 3 OS=Mus musculus GN=Wasf3 PE=2 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R ++P+ L R          P     EL+ V N+TL   ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIEPRHLCR-------GALPEGVTSELECVTNSTLAAIIRQLSSLSKHAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFD 91
          +L  E      + ++L+ R+ RL     + D
Sbjct: 54 ELFNEANNFYIRANSLQDRIDRLAVKVTQLD 84

Downstream effector molecules involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.

Mus musculus (taxid: 10090)

>sp|Q9UPY6|WASF3_HUMAN Wiskott-Aldrich syndrome protein family member 3 OS=Homo sapiens GN=WASF3 PE=1 SV=2

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R ++P+ L R          P     EL+ V N+TL   ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIEPRHLCR-------GALPEGITSELECVTNSTLAAIIRQLSSLSKHAEDIFG 53

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFD 91
          +L  E      + ++L+ R+ RL     + D
Sbjct: 54 ELFNEANNFYIRANSLQDRIDRLAVKVTQLD 84

Downstream effector molecules involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
270002111	146	hypothetical protein TcasGA2_TC001065 [T	0.99	0.678	0.51	4e-20
170056198	131	conserved hypothetical protein [Culex qu	0.97	0.740	0.464	1e-15
242010150	105	conserved hypothetical protein [Pediculu	0.97	0.923	0.459	2e-15
157133685	110	hypothetical protein AaeL_AAEL012848 [Ae	0.97	0.881	0.444	3e-15
357625178	151	hypothetical protein KGM_20808 [Danaus p	0.96	0.635	0.463	3e-14
19571848	135	putative cytoskeletal regulator [Anophel	0.96	0.711	0.42	2e-13
347966194	1722	AGAP001583-PA [Anopheles gambiae str. PE	0.97	0.056	0.425	4e-13
328708977	1236	PREDICTED: hypothetical protein LOC10016	0.96	0.077	0.443	2e-12
345484193	1733	PREDICTED: hypothetical protein LOC10011	0.95	0.054	0.422	3e-12
380014944	97	PREDICTED: wiskott-Aldrich syndrome prot	0.97	1.0	0.381	5e-11

>gi|270002111|gb|EEZ98558.1| hypothetical protein TcasGA2_TC001065 [Tribolium castaneum]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 51/100 (51%), Positives = 69/100 (69%), Gaps = 1/100 (1%)

Query: 1   MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
           MPFV R V+PKFLSR + L D  G PLV + EL+AV NNTL N L+QL S+V +A DIF 
Sbjct: 1   MPFVQRVVEPKFLSRTS-LWDEEGKPLVSDDELEAVTNNTLSNALRQLASLVLIADDIFA 59

Query: 61  QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS 100
           +L  +L  ++++++ LKA++A +      FDPK VTV FS
Sbjct: 60  ELGSQLKEINKRSEGLKAKIAAVEGKVSAFDPKKVTVPFS 99

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170056198|ref|XP_001863923.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167875992|gb|EDS39375.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 67/99 (67%), Gaps = 2/99 (2%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAG--SPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDI 58
          MPFV R V PK+++R+ K   + G  S  V++ EL+A+ N TL N L+QL S+V ++  I
Sbjct: 1  MPFVQRVVTPKYVARSTKPSHSRGAVSLPVQDYELEAITNLTLSNALRQLASLVLISNQI 60

Query: 59 FKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          F +LN+EL +VSE++  +K R+  L+   EEFDPK VTV
Sbjct: 61 FTELNKELASVSERSLGIKQRIDNLSTRVEEFDPKQVTV 99

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010150|ref|XP_002425839.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212509772|gb|EEB13101.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V RT++PK+LSR + L D  G  L+ + EL+AV NNTL N L+QL S+V VA DIF+
Sbjct: 1  MPLVTRTIEPKYLSRKS-LFDENGKSLINDYELEAVTNNTLTNVLRQLASLVLVANDIFE 59

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVR 98
           L   L  V E++  LK ++  +  +  E+DPK +TV+
Sbjct: 60 DLARHLQNVYERSCKLKIKINNVEDNLLEYDPKKITVQ 97

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157133685|ref|XP_001662964.1| hypothetical protein AaeL_AAEL012848 [Aedes aegypti] gi|108870725|gb|EAT34950.1| AAEL012848-PA, partial [Aedes aegypti]

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 2/99 (2%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPL--VKEGELDAVINNTLCNCLKQLGSVVSVAGDI 58
          MPFV R V PK+++R+ K   + G+    V++ EL+A+ N TL N L+QL S+V ++  I
Sbjct: 1  MPFVQRVVTPKYVARSTKPSHSRGTAALPVQDYELEAITNLTLSNALRQLASLVLISNQI 60

Query: 59 FKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          F +LN+EL +VSE++  +K R+  L+   EEFDPK V V
Sbjct: 61 FTELNKELASVSERSLGIKQRIDNLSKRVEEFDPKQVAV 99

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357625178|gb|EHJ75705.1| hypothetical protein KGM_20808 [Danaus plexippus]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/97 (46%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MPFV R V+PKFLSR + L D  G   V + EL AV N TL N L+QL S+V +A DIF 
Sbjct: 1  MPFVQRVVEPKFLSRTS-LRDEDGKLKVTDEELQAVTNCTLSNALRQLASLVLLAEDIFS 59

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          +L  +L  ++E++   K ++ R+    E++DPK VTV
Sbjct: 60 ELTSQLEEITERSKVAKTKIERVQEIVEKYDPKKVTV 96

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|19571848|emb|CAD27482.1| putative cytoskeletal regulator [Anopheles gambiae] gi|19577371|emb|CAD27753.1| putative cytoskeletal regulator [Anopheles gambiae]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 67/100 (67%), Gaps = 4/100 (4%)

Query: 1   MPFVVRTVQPKFLSRNNKLL--DTAGSPL--VKEGELDAVINNTLCNCLKQLGSVVSVAG 56
           MPFV R V PK+++R++KL     A +P   V + E +A+ N TL N L+QL S+V ++ 
Sbjct: 1   MPFVKRVVTPKYIARSSKLALQPYAAAPTIPVADNEFEALTNVTLSNALRQLASLVYISN 60

Query: 57  DIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVT 96
            IF +L++EL +V+E++  +K R+ RL+A  ++ DPK VT
Sbjct: 61  QIFTELHQELSSVNERSLGIKQRIDRLSAKVDQCDPKQVT 100

Source: Anopheles gambiae

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347966194|ref|XP_321528.4| AGAP001583-PA [Anopheles gambiae str. PEST] gi|333470168|gb|EAA01290.5| AGAP001583-PA [Anopheles gambiae str. PEST]

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/101 (42%), Positives = 68/101 (67%), Gaps = 4/101 (3%)

Query: 1   MPFVVRTVQPKFLSRNNKLL--DTAGSPL--VKEGELDAVINNTLCNCLKQLGSVVSVAG 56
           MPFV R V PK+++R++KL     A +P   V + E +A+ N TL N L+QL S+V ++ 
Sbjct: 1   MPFVKRVVTPKYIARSSKLALQPYAAAPTIPVADNEFEALTNVTLSNALRQLASLVYISN 60

Query: 57  DIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
            IF +L++EL +V+E++  +K R+ RL+A  ++ DPK VTV
Sbjct: 61  QIFTELHQELSSVNERSLGIKQRIDRLSAKVDQCDPKQVTV 101

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328708977|ref|XP_001944548.2| PREDICTED: hypothetical protein LOC100163301 [Acyrthosiphon pisum]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MPFV R V P  LSR  KL D  G P V++ ELDAV N  L N L+Q+ SV ++A ++F+
Sbjct: 1  MPFVQRAVGPVHLSRV-KLHDEHGVPTVRDRELDAVTNFALSNALRQMASVAALADEVFR 59

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          +L  +L  V+ ++  LK R+  L    +  DPK VTV
Sbjct: 60 ELRGQLADVATRSAGLKRRVQALGHLVDHADPKAVTV 96

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345484193|ref|XP_001601365.2| PREDICTED: hypothetical protein LOC100117012 [Nasonia vitripennis]

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 2/97 (2%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MPFV R V+P+FLSR +    +   P+    EL+AV N  L   LKQL S++ VA DIF 
Sbjct: 1  MPFVTRKVEPRFLSRGHVPSGSRDWPVG--AELEAVANGALTASLKQLASLLVVAEDIFA 58

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          +L  EL  ++E++  L+AR+ R+     E DPK + V
Sbjct: 59 ELTAELAGIAERSGKLRARIDRVEERLAEQDPKKIPV 95

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014944|ref|XP_003691474.1| PREDICTED: wiskott-Aldrich syndrome protein family member 2-like, partial [Apis florea]

 Score = 72.0 bits (175), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 56/97 (57%)

Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MPFV+R V+P+FL R +    +         EL+AV N  L   LKQL S++++A DIF 
Sbjct: 1  MPFVLRRVEPRFLCRGHVPAGSTAQGWPVGAELEAVANGALTTSLKQLASLLTIAEDIFA 60

Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV 97
          +L  EL AV++++  L+ R+ ++       DPK V V
Sbjct: 61 ELTTELTAVADRSSNLRQRIDKVEERLATVDPKKVPV 97

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	100
FB|FBgn0026239	2039	gukh "GUK-holder" [Drosophila	0.76	0.037	0.428	8.4e-10
UNIPROTKB|Q9Y6W5	498	WASF2 "Wiskott-Aldrich syndrom	0.85	0.170	0.344	4.1e-07
UNIPROTKB|Q5SZK3	89	WASF1 "Wiskott-Aldrich syndrom	0.86	0.966	0.344	4.8e-07
UNIPROTKB|Q5SZK4	140	WASF1 "Wiskott-Aldrich syndrom	0.86	0.614	0.344	4.8e-07
UNIPROTKB|Q5SZK5	180	WASF1 "Wiskott-Aldrich syndrom	0.86	0.477	0.344	4.8e-07
UNIPROTKB|A2VDK6	493	WASF2 "Wiskott-Aldrich syndrom	0.85	0.172	0.333	8.5e-07
MGI|MGI:1098641	497	Wasf2 "WAS protein family, mem	0.85	0.171	0.322	8.6e-07
RGD|1307299	497	Wasf2 "WAS protein family, mem	0.85	0.171	0.322	8.6e-07
ZFIN|ZDB-GENE-040426-865	486	wasf2 "WAS protein family, mem	0.86	0.176	0.333	1.4e-06
UNIPROTKB|E2RR96	498	WASF2 "Uncharacterized protein	0.85	0.170	0.333	2.3e-06

FB|FBgn0026239 gukh "GUK-holder" [Drosophila melanogaster (taxid:7227)]

 Score = 145 (56.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 33/77 (42%), Positives = 46/77 (59%)

Query:    22 TAGSPLVKEG-ELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARM 80
             TAGS  V  G E D++ N TL N L+QL S+V +A DIF  L  +L AV E+   ++ ++
Sbjct:   127 TAGSSKVVSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAVGERAGRVQRKI 186

Query:    81 ARLNAHTEEFDPKLVTV 97
             A +      +DPK VTV
Sbjct:   187 AAVERRVCAYDPKTVTV 203

GO:0005515 "protein binding" evidence=IPI

GO:0042734 "presynaptic membrane" evidence=IDA

GO:0043195 "terminal bouton" evidence=IDA

GO:0008104 "protein localization" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

UNIPROTKB|Q9Y6W5 WASF2 "Wiskott-Aldrich syndrome protein family member 2" [Homo sapiens (taxid:9606)]

 Score = 125 (49.1 bits), Expect = 4.1e-07, P = 4.1e-07
 Identities = 32/93 (34%), Positives = 47/93 (50%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R          P V+  EL+ V N TL N ++QLGS+   A DIF 
Sbjct:     1 MPLVTRNIEPRHLCRQTL-------PSVRS-ELECVTNITLANVIRQLGSLSKYAEDIFG 52

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  +    + +  +L  R+ RL     + DPK
Sbjct:    53 ELFTQANTFASRVSSLAERVDRLQVKVTQLDPK 85

GO:0003779 "actin binding" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IDA

GO:0030027 "lamellipodium" evidence=IDA

GO:0007188 "adenylate cyclase-modulating G-protein coupled receptor signaling pathway" evidence=TAS

GO:0015629 "actin cytoskeleton" evidence=TAS

UNIPROTKB|Q5SZK3 WASF1 "Wiskott-Aldrich syndrome protein family member 1" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R + P+ L        TA  P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct:     1 MPLVKRNIDPRHLCH------TA-LPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct:    54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

UNIPROTKB|Q5SZK4 WASF1 "Wiskott-Aldrich syndrome protein family member 1" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R + P+ L        TA  P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct:     1 MPLVKRNIDPRHLCH------TA-LPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct:    54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

UNIPROTKB|Q5SZK5 WASF1 "Wiskott-Aldrich syndrome protein family member 1" [Homo sapiens (taxid:9606)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R + P+ L        TA  P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct:     1 MPLVKRNIDPRHLCH------TA-LPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct:    54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

GO:0005741 "mitochondrial outer membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

UNIPROTKB|A2VDK6 WASF2 "Wiskott-Aldrich syndrome protein family member 2" [Bos taurus (taxid:9913)]

 Score = 122 (48.0 bits), Expect = 8.5e-07, P = 8.5e-07
 Identities = 31/93 (33%), Positives = 47/93 (50%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R          P V+  EL+ + N TL N ++QLGS+   A DIF 
Sbjct:     1 MPLVTRNIEPRHLCRQTL-------PSVRS-ELECMTNITLANVIRQLGSLSKYAEDIFG 52

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  +    + +  +L  R+ RL     + DPK
Sbjct:    53 ELFTQANTFASRVSSLAERVDRLQVKVTQLDPK 85

GO:0030027 "lamellipodium" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

MGI|MGI:1098641 Wasf2 "WAS protein family, member 2" [Mus musculus (taxid:10090)]

 Score = 122 (48.0 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R     DT+        EL+   N TL N ++QLGS+   A DIF 
Sbjct:     1 MPLVTRNIEPRHLCRQTLPSDTS--------ELECRTNITLANVIRQLGSLSKYAEDIFG 52

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             ++  +  A + + ++L  R+ R+     + DPK
Sbjct:    53 EICTQASAFASRVNSLAERVDRVQVKVTQLDPK 85

GO:0001525 "angiogenesis" evidence=IMP

GO:0001667 "ameboidal cell migration" evidence=IMP

GO:0001726 "ruffle" evidence=IDA

GO:0003779 "actin binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=ISA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005769 "early endosome" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006897 "endocytosis" evidence=IDA

GO:0006928 "cellular component movement" evidence=IMP

GO:0016601 "Rac protein signal transduction" evidence=IMP

GO:0030027 "lamellipodium" evidence=ISA;IDA

GO:0030032 "lamellipodium assembly" evidence=IMP

GO:0030036 "actin cytoskeleton organization" evidence=IMP

GO:0030048 "actin filament-based movement" evidence=IMP

GO:0035855 "megakaryocyte development" evidence=IMP

GO:0072673 "lamellipodium morphogenesis" evidence=IMP

RGD|1307299 Wasf2 "WAS protein family, member 2" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 8.6e-07, P = 8.6e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R     DT+        EL+   N TL N ++QLGS+   A DIF 
Sbjct:     1 MPLVTRNIEPRHLCRQTLPSDTS--------ELECRTNITLANVIRQLGSLSKYAEDIFG 52

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             ++  +  A + + ++L  R+ R+     + DPK
Sbjct:    53 EICTQASAFASRVNSLAERVDRVQVKVTQLDPK 85

GO:0001525 "angiogenesis" evidence=ISO

GO:0001667 "ameboidal cell migration" evidence=ISO

GO:0001726 "ruffle" evidence=ISO

GO:0005622 "intracellular" evidence=ISO

GO:0005769 "early endosome" evidence=ISO

GO:0006897 "endocytosis" evidence=ISO

GO:0006928 "cellular component movement" evidence=ISO

GO:0016601 "Rac protein signal transduction" evidence=ISO

GO:0030027 "lamellipodium" evidence=ISO

GO:0030032 "lamellipodium assembly" evidence=ISO

GO:0030036 "actin cytoskeleton organization" evidence=ISO

GO:0030048 "actin filament-based movement" evidence=ISO

GO:0035855 "megakaryocyte development" evidence=ISO

GO:0072673 "lamellipodium morphogenesis" evidence=ISO

ZFIN|ZDB-GENE-040426-865 wasf2 "WAS protein family, member 2" [Danio rerio (taxid:7955)]

 Score = 120 (47.3 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 31/93 (33%), Positives = 48/93 (51%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R   L +T  S      EL+ V N TL N ++QLGS+   A D+F 
Sbjct:     1 MPLVTRNIEPRHLCRQT-LPNTIKS------ELECVTNITLANIIRQLGSLSKYAEDVFG 53

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  +    +++   L  R+ +L     + DPK
Sbjct:    54 ELFVQASKFADRVTTLGERVDKLQVKVTQLDPK 86

GO:0003779 "actin binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2RR96 WASF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 118 (46.6 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 31/93 (33%), Positives = 46/93 (49%)

Query:     1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
             MP V R ++P+ L R          P V+  EL+ V N TL N ++QLGS+   A DI  
Sbjct:     1 MPLVTRNIEPRHLCRQTL-------PSVRS-ELECVTNITLANVIRQLGSLSKYAEDIVG 52

Query:    61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
             +L  +    + +  +L  R+ RL     + DPK
Sbjct:    53 ELFTQANTFASRVSSLAERVDRLQVKVTQLDPK 85

GO:0030048 "actin filament-based movement" evidence=IEA

GO:0030036 "actin cytoskeleton organization" evidence=IEA

GO:0030032 "lamellipodium assembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0016601 "Rac protein signal transduction" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005769 "early endosome" evidence=IEA

GO:0001726 "ruffle" evidence=IEA

GO:0001667 "ameboidal cell migration" evidence=IEA

GO:0001525 "angiogenesis" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	100
KOG1830|consensus	518		100.0
PF11945	297	WASH_WAHD: WAHD domain of WASH complex; InterPro:	96.85
PF06825	54	HSBP1: Heat shock factor binding protein 1; InterP	89.93
PF05531	75	NPV_P10: Nucleopolyhedrovirus P10 protein; InterPr	88.34
TIGR02976	75	phageshock_pspB phage shock protein B. This model	87.62
TIGR02132	189	phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR	83.97
TIGR02132	189	phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR	82.46
PF00517	204	GP41: Retroviral envelope protein; InterPro: IPR00	81.81

>KOG1830|consensus

Probab=100.00  E-value=6e-41  Score=275.25  Aligned_cols=92  Identities=32%  Similarity=0.526  Sum_probs=88.9

Q ss_pred             CCCcccccccceeecCCCCCCcCCCCCCccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980           1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARM   80 (100)
Q Consensus         1 MPlvkR~VeP~~l~r~~~l~~~~~~~~~~~~eLe~Vtn~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri   80 (100)
                      ||||||+|+|+||||+ +++.+      ..+|||||||+||+|||||||||||||||||||||+|+++|++|+|+||+||
T Consensus         1 MPLvKRnIePrhlcr~-~lp~~------~~~ELecvtN~TLaniIRQLsSLSKhAEdIFGELf~da~~f~~R~NSLQ~RI   73 (518)
T KOG1830|consen    1 MPLVKRNIEPRHLCRG-TLPSG------IRSELECVTNITLANIIRQLSSLSKHAEDIFGELFNDANNFNHRANSLQERI   73 (518)
T ss_pred             CCCccccCchhhhhhh-ccccc------cccceeeecchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Confidence            9999999999999999 67764      3899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcCCceeeeeC
Q psy1980          81 ARLNAHTEEFDPKLVTVRF   99 (100)
Q Consensus        81 ~rL~~~v~~lD~k~~~V~~   99 (100)
                      |||+.||+|||+|.|+|+|
T Consensus        74 DRL~vkVtqLDs~~eevsL   92 (518)
T KOG1830|consen   74 DRLAVKVTQLDSTVEEVSL   92 (518)
T ss_pred             HHHhhhhhccCCccccccc
Confidence            9999999999999999987

>PF11945 WASH_WAHD: WAHD domain of WASH complex; InterPro: IPR021854 This entry represents a component of the WASH complex

Probab=96.85  E-value=0.0055  Score=49.04  Aligned_cols=58  Identities=19%  Similarity=0.298  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCceeee
Q psy1980          40 TLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTV   97 (100)
Q Consensus        40 tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~lD~k~~~V   97 (100)
                      |+.-++..|.-|-+..+|||+-+.+-+.....|...|++||..+++||.++-..+..+
T Consensus        19 ti~qi~~aL~~L~~v~~diF~rI~~Rv~~~~~~l~~i~~Ri~~~qaKi~~l~gs~kAi   76 (297)
T PF11945_consen   19 TILQIADALEYLDKVSNDIFSRISARVERNRERLQAIQQRIEVAQAKIEKLQGSKKAI   76 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence            4778888999999999999999999999999999999999999999999987666554

The WASH complex is present at the surface of endosomes and recruits and activates the Arp2/3 complex to induce actin polymerisation. The WASH complex plays a key role in the fission of tubules that serve as transport intermediates during endosome sorting []. The WASH complex's subunit structure: F-actin-capping protein subunit alpha (CAPZA1, CAPZA2 or CAPZA3), F-actin-capping protein subunit beta (CAPZB), WASH (WASH1, WASH2P, WASH3P, WASH4P, WASH5P or WASH6P), FAM21 (FAM21A, FAM21B or FAM21C), KIAA1033, KIAA0196 (strumpellin) and CCDC53. This entry represents the WASH subunit of the WASH complex. WASH genes duplicated to multiple chromosomal ends during primate evolution, with highest copy number reached in humans, whose WASH repertoires probably vary extensively among individuals []. It is therefore difficult to determine which gene is functional or not. The telomeric region of chromosome 9p is paralogous to the pericentromeric regions of chromosome 9 as well as to 2q. Paralogous regions contain 7 transcriptional units. Duplicated WASH genes are also present in the Xq/Yq pseudoautosomal region, as well as on chromosome 1 and 15. The chromosome 16 copy seems to be a pseudogene.

>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response []

Probab=89.93  E-value=1  Score=27.85  Aligned_cols=41  Identities=10%  Similarity=0.391  Sum_probs=29.8

Q ss_pred             hHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhhhhc
Q psy1980          50 SVVSVAGDIFKQLNEELVA----VSEKTDALKARMARLNAHTEEF   90 (100)
Q Consensus        50 sLs~~AediF~eL~~e~~~----~~~R~~~L~~Ri~rL~~~v~~l   90 (100)
                      +|..+.++++.++.+-...    |..|......|||.|+..+..|
T Consensus         3 elt~~v~~lL~qmq~kFq~mS~~I~~riDeM~~RIDdLE~si~dl   47 (54)
T PF06825_consen    3 ELTAFVQNLLQQMQDKFQTMSDQILGRIDEMSSRIDDLEKSIADL   47 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            5677777787777776655    5678888889999998888765

; PDB: 3CI9_A.

>PF05531 NPV_P10: Nucleopolyhedrovirus P10 protein; InterPro: IPR008702 This family consists of several nucleopolyhedrovirus P10 proteins which are thought to be involved in the morphogenesis of the polyhedra []

Probab=88.34  E-value=0.96  Score=29.80  Aligned_cols=34  Identities=24%  Similarity=0.474  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1980          56 GDIFKQLNEELVAVSEKTDALKARMARLNAHTEE   89 (100)
Q Consensus        56 ediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~   89 (100)
                      .+||.-+-.++..+..++.+||.+|+.++..++.
T Consensus         3 ~NILl~Ir~dIk~vd~KVdaLq~~V~~l~~~~~~   36 (75)
T PF05531_consen    3 QNILLVIRQDIKAVDDKVDALQTQVDDLESNLPD   36 (75)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            5789999999999999999999999999988876

; GO: 0019028 viral capsid

>TIGR02976 phageshock_pspB phage shock protein B

Probab=87.62  E-value=1.5  Score=28.63  Aligned_cols=36  Identities=19%  Similarity=0.238  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCc
Q psy1980          58 IFKQLNEELVAVSEKTDALKARMARLNAHTEEFDPK   93 (100)
Q Consensus        58 iF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~lD~k   93 (100)
                      +=++-...+..++.+.+.|++||+-||.-++.=+|+
T Consensus        36 ls~~d~~~L~~L~~~a~rm~eRI~tLE~ILd~e~P~   71 (75)
T TIGR02976        36 LSTDDQALLQELYAKADRLEERIDTLERILDAEHPN   71 (75)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence            444566677788888999999999999988877765

This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.

>TIGR02132 phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR subunit

Probab=83.97  E-value=6.8  Score=29.90  Aligned_cols=22  Identities=18%  Similarity=0.353  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhh
Q psy1980          68 AVSEKTDALKARMARLNAHTEE   89 (100)
Q Consensus        68 ~~~~R~~~L~~Ri~rL~~~v~~   89 (100)
                      .+-.++..++.||.+|+.||.+
T Consensus       111 ~~~~~v~~~~q~~~~l~~K~D~  132 (189)
T TIGR02132       111 ALKKDVTKLKQDIKSLDKKLDK  132 (189)
T ss_pred             hHHhHHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555543

This model describes a protein, PhaR, localized to polyhydroxyalkanoic acid (PHA) inclusion granules in Bacillus cereus and related species. PhaR is required for PHA biosynthesis along with PhaC and may be a regulatory subunit.

>TIGR02132 phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR subunit

Probab=82.46  E-value=10  Score=28.97  Aligned_cols=52  Identities=6%  Similarity=0.130  Sum_probs=40.7

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1980          38 NNTLCNCLKQLGSVVSVAGDIFKQLN------------EELVAVSEKTDALKARMARLNAHTEE   89 (100)
Q Consensus        38 n~tL~nilRQL~sLs~~AediF~eL~------------~e~~~~~~R~~~L~~Ri~rL~~~v~~   89 (100)
                      --+.+..|.+.+++.-.+-.+|++..            +++..++.|+-.|..|||+++..+.+
T Consensus        34 TEEFSa~IG~vLd~yL~yQKafnE~MekYLe~lNlPSr~DiarvA~lvinlE~kvD~lee~fdd   97 (189)
T TIGR02132        34 REEFSALMGNVLDLNLFYQKALNDTTGNYLEQVNVPTKEDIANVASLVINLEEKVDLIEEFFDD   97 (189)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556778888888777888888764            57888899999999999998877765

This model describes a protein, PhaR, localized to polyhydroxyalkanoic acid (PHA) inclusion granules in Bacillus cereus and related species. PhaR is required for PHA biosynthesis along with PhaC and may be a regulatory subunit.

>PF00517 GP41: Retroviral envelope protein; InterPro: IPR000328 This entry represents envelope proteins from a variety of retroviruses

Probab=81.81  E-value=14  Score=27.88  Aligned_cols=51  Identities=14%  Similarity=0.152  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980          38 NNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE   88 (100)
Q Consensus        38 n~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~   88 (100)
                      ...|+++..|.+.+.+.=|.+.+-|..-+..+...+..|++||..+|.-+.
T Consensus        13 ~~~l~~i~q~~~~ll~~~e~~~~lL~l~v~gik~~V~~L~aRV~alE~~l~   63 (204)
T PF00517_consen   13 AQLLNGIVQQQSNLLRAQEAQQHLLQLTVWGIKQGVKQLQARVLALERYLK   63 (204)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhHHHHHHHhh
Confidence            345789999999999999999999999899999999999999999987664

It includes the GP41 subunit of the envelope protein complex from Human immunodeficiency virus (HIV) and Simian-Human immunodeficiency virus (SIV), which mediate membrane fusion during viral entry []. It has a core composed of a six-helix bundle and is folded by its trimeric N- and C-terminal heptad-repeats (NHR and CHR) []. Derivatives of this protein prevent HIV-1 from entering cell lines and primary human CD4+ cells in vitro [], making it an attractive subject of gene therapy studies against HIV and related retroviruses. The entry also represents envelop proteins from Bovine immunodeficiency virus, Feline immunodeficiency virus and Equine infectious anemia virus (EIAV) [, ], as well as the Gp36 protein from Mouse mammary tumor virus (MMTV) and Human endogenous retrovirus (HERV).; GO: 0005198 structural molecule activity, 0019031 viral envelope; PDB: 2EZO_B 2EZQ_B 2EZR_A 2JNR_B 1F23_D 2EZP_A 1JEK_A 2Q7C_A 2Q5U_A 2Q3I_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	100
3p8c_D	279	Structure And Control Of The Actin Regulatory Wave		3e-07

>pdb|3P8C|D Chain D, Structure And Control Of The Actin Regulatory Wave Complex Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 1  MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
          MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1  MPLVKRNIDPRHLCH-------TALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53
Query: 61 QLNEELVAVSEKTDALKARMARLNAHTEEFDPK 93
          +L  E  + S + ++L+ R+ RL+    + DPK
Sbjct: 54 ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPK 86

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	100
3p8c_D	279	Wiskott-aldrich syndrome protein family member 1;	2e-20

>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens} Length = 279

 Score = 81.9 bits (201), Expect = 2e-20
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 1   MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFK 60
           MP V R + P+ L            P   + EL+ V N +L N ++QL S+   A DIF 
Sbjct: 1   MPLVKRNIDPRHLCH-------TALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFG 53

Query: 61  QLNEELVAVSEKTDALKARMARLNAHTEEFDPKLVTVRFS 100
           +L  E  + S + ++L+ R+ RL+    + DPK   +   
Sbjct: 54  ELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQ 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	100
3p8c_D	279	Wiskott-aldrich syndrome protein family member 1;	100.0
2akf_A	32	Coronin-1A; coiled coil, protein binding; 1.20A {S	94.75
2pnv_A	43	Small conductance calcium-activated potassium chan	90.86
2pnv_A	43	Small conductance calcium-activated potassium chan	87.04
3p8c_F	159	ABL interactor 2; actin polymerization, protein bi	87.03
3pp5_A	73	BRK1, protein brick1; triple coiled-coil, precurso	84.59
3u0c_A	201	Invasin IPAB, 62 kDa antigen; translocator, type t	84.04
3twe_A	27	Alpha4H; unknown function; HET: PGE; 1.36A {Synthe	83.71
3ci9_A	48	Heat shock factor-binding protein 1; triple helix,	80.16

>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.9e-36  Score=233.42  Aligned_cols=92  Identities=33%  Similarity=0.515  Sum_probs=69.5

Q ss_pred             CCCcccccccceeecCCCCCCcCCCCCCccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy1980           1 MPFVVRTVQPKFLSRNNKLLDTAGSPLVKEGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARM   80 (100)
Q Consensus         1 MPlvkR~VeP~~l~r~~~l~~~~~~~~~~~~eLe~Vtn~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri   80 (100)
                      ||||||+|+|+||||+ ++|.+      +++|||||+|+||+|+|||||||++||+|||+||++|++.+++|++.|+.||
T Consensus         1 MPlv~R~veP~~lcr~-~lp~~------i~~eLe~V~n~tL~gilRQL~dLs~~A~dIF~eL~~e~~~~~~R~~~L~~RI   73 (279)
T 3p8c_D            1 MPLVKRNIDPRHLCHT-ALPRG------IKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERV   73 (279)
T ss_dssp             ---------------------C------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccccCceeeecC-CCCcc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999 57664      3799999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhcCCceeeeeC
Q psy1980          81 ARLNAHTEEFDPKLVTVRF   99 (100)
Q Consensus        81 ~rL~~~v~~lD~k~~~V~~   99 (100)
                      ++|+++|+++||+.++|++
T Consensus        74 ~~L~~~v~~ld~~~eevSL   92 (279)
T 3p8c_D           74 DRLSVSVTQLDPKEEELSL   92 (279)
T ss_dssp             HHHHHHHHTCCTTTCCCCT
T ss_pred             HHHHHhcccccccccccch
Confidence            9999999999999999876

>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}

Probab=94.75  E-value=0.055  Score=29.31  Aligned_cols=29  Identities=21%  Similarity=0.426  Sum_probs=24.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1980          61 QLNEELVAVSEKTDALKARMARLNAHTEE   89 (100)
Q Consensus        61 eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~   89 (100)
                      -|.+|+..+..=+..||.|+|||++.|..
T Consensus         3 rlee~~r~l~~ivq~lq~r~drle~tvqa   31 (32)
T 2akf_A            3 RLEEDVRNLNAIVQKLQERLDRLEETVQA   31 (32)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            36778888888899999999999998753

>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}

Probab=90.86  E-value=0.35  Score=27.87  Aligned_cols=23  Identities=17%  Similarity=0.476  Sum_probs=13.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhc
Q psy1980          68 AVSEKTDALKARMARLNAHTEEF   90 (100)
Q Consensus        68 ~~~~R~~~L~~Ri~rL~~~v~~l   90 (100)
                      .+++|...|..||+.|+.|+..|
T Consensus        13 el~~r~e~LE~Ri~~LE~KLd~L   35 (43)
T 2pnv_A           13 DLNERSEDFEKRIVTLETKLETL   35 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHHHHHHHHH
Confidence            45566666666666666666543

>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}

Probab=87.04  E-value=2  Score=24.57  Aligned_cols=37  Identities=16%  Similarity=0.279  Sum_probs=32.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q psy1980          54 VAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEF   90 (100)
Q Consensus        54 ~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~l   90 (100)
                      ...||-.|+..-=..+-.|..+|..|++.|+..+..|
T Consensus         6 ~mydlvsel~~r~e~LE~Ri~~LE~KLd~L~~~l~aL   42 (43)
T 2pnv_A            6 IMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHAL   42 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            3568888888888899999999999999999988765

>3p8c_F ABL interactor 2; actin polymerization, protein binding; 2.29A {Homo sapiens}

Probab=87.03  E-value=5.2  Score=28.68  Aligned_cols=59  Identities=7%  Similarity=0.077  Sum_probs=50.6

Q ss_pred             cchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1980          30 EGELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTE   88 (100)
Q Consensus        30 ~~eLe~Vtn~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~   88 (100)
                      .+|-...+-.+|+++.=|++.|+.+=.+++.-=..++..+..+.+.|.++++=-.+||.
T Consensus        48 leeTK~Ya~qsLaSVAyqIn~lA~~ll~lLd~Q~~~l~~mes~v~~l~Q~v~ih~EKva  106 (159)
T 3p8c_F           48 LEETKAYTTQSLASVAYLINTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVA  106 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            56777888999999999999999999999988888888999999988888876666553

>3pp5_A BRK1, protein brick1; triple coiled-coil, precursor of the SCAR-WAVE complex, ABI, structural protein; 1.50A {Dictyostelium discoideum}

Probab=84.59  E-value=5.7  Score=25.11  Aligned_cols=54  Identities=13%  Similarity=0.124  Sum_probs=40.8

Q ss_pred             chHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q psy1980          31 GELDAVINNTLCNCLKQLGSVVSVAGDIFKQLNEELVAVSEKTDALKARMARLNAHTEEFD   91 (100)
Q Consensus        31 ~eLe~Vtn~tL~nilRQL~sLs~~AediF~eL~~e~~~~~~R~~~L~~Ri~rL~~~v~~lD   91 (100)
                      .|+..+.|..+..+.+.|..-+-+.++=+.       .+.+|...|..+++-|++++...|
T Consensus        19 Re~ie~is~~I~~~v~FLN~F~~sce~KLa-------~ln~kL~~lE~~L~iLEAklsSI~   72 (73)
T 3pp5_A           19 REFIEDMSINIQKIVEFLNKFELSTRNKLS-------DLNEKLTILDRQVDYLEATFKTVQ   72 (73)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccC
Confidence            377788888889999999988888776655       456677778888888888887665

>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P

Probab=84.04  E-value=7.4  Score=28.64  Aligned_cols=29  Identities=21%  Similarity=0.432  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhcCCce
Q psy1980          66 LVAVSEKTDALKARMARLNAHTEEFDPKL   94 (100)
Q Consensus        66 ~~~~~~R~~~L~~Ri~rL~~~v~~lD~k~   94 (100)
                      ..+.-.+..+++.++++++.++.+|||..
T Consensus       119 y~~Ads~~~~lekKvn~aq~kLs~L~P~d  147 (201)
T 3u0c_A          119 LKNADSKIKDLENKINQIQTRLSELDPES  147 (201)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            34455788999999999999999999964

>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*

Probab=83.71  E-value=1.9  Score=22.27  Aligned_cols=21  Identities=24%  Similarity=0.469  Sum_probs=13.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q psy1980          60 KQLNEELVAVSEKTDALKARM   80 (100)
Q Consensus        60 ~eL~~e~~~~~~R~~~L~~Ri   80 (100)
                      .||++|+..+.+|...|..++
T Consensus         4 delykeledlqerlrklrkkl   24 (27)
T 3twe_A            4 DELYKELEDLQERLRKLRKKL   24 (27)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            467777777666666665543

>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}

Probab=80.16  E-value=3.9  Score=23.84  Aligned_cols=39  Identities=15%  Similarity=0.396  Sum_probs=21.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhh
Q psy1980          49 GSVVSVAGDIFKQLNEELVAV----SEKTDALKARMARLNAHT   87 (100)
Q Consensus        49 ~sLs~~AediF~eL~~e~~~~----~~R~~~L~~Ri~rL~~~v   87 (100)
                      .+|..+.+++++++.+-...+    ..|......|||.|+..+
T Consensus         5 ~dLt~~vq~LL~qmq~kFq~mS~~I~~riDdM~~RIDdLE~si   47 (48)
T 3ci9_A            5 QDLTSVVQTLLQQMQDKFQTISDQIIGRIDDMSSRIDDLEKNI   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhc
Confidence            345666666766666655443    345666666666666543

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00