Psyllid ID: psy2068

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
Protein Sequence
MLFSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Secondary Structure (PSIPRED)
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccHHHHHEEcccccccccEEEEEEEccEEEccEEEcccEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccHcEEEEEccccccccccEEEEEEEcEEEcccEEEEEEEEEEcc
Coil and Loop (DISEMBL)
mlfsyqknwmsdsYLAQLTIDYSFVCRMKWKQANVFkrhglepinplgekfdpnfHEALFEQevegkeanTVVVVSKIGYKLYNRVIRPalvgisks
Flexible Loop (DISEMBL)
mlfsyqknwmsdsyLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEqevegkeantVVVVSKigyklynrvirpalvgisks
Low Complexity Region (SEG)
MLFSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Disordered region (IsUnstruct)
****YQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI***
Disordered Region (DISOPRED)
*LFSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Disordered Region (DISEMBL)
MLFSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Disordered Region (DISPRO)
****YQK****DSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLFSYQKNWMSDSYLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	97	2.2.26 [Sep-21-2011]
P48604	213	GrpE protein homolog, mit	yes	N/A	0.639	0.291	0.677	3e-20
Q5RA81	217	GrpE protein homolog 1, m	yes	N/A	0.639	0.285	0.629	5e-17
Q9HAV7	217	GrpE protein homolog 1, m	yes	N/A	0.639	0.285	0.629	5e-17
Q3SZC1	217	GrpE protein homolog 1, m	yes	N/A	0.649	0.290	0.619	6e-17
Q99LP6	217	GrpE protein homolog 1, m	yes	N/A	0.649	0.290	0.603	1e-16
P97576	217	GrpE protein homolog 1, m	yes	N/A	0.649	0.290	0.603	2e-16
Q6CRQ1	243	GrpE protein homolog, mit	yes	N/A	0.639	0.255	0.580	6e-14
P38523	228	GrpE protein homolog, mit	yes	N/A	0.649	0.276	0.539	2e-13
A6WVA7	228	Protein GrpE OS=Ochrobact	yes	N/A	0.639	0.271	0.516	8e-13
Q5GSA3	182	Protein GrpE OS=Wolbachia	yes	N/A	0.649	0.346	0.492	1e-12

>sp|P48604|GRPE_DROME GrpE protein homolog, mitochondrial OS=Drosophila melanogaster GN=Roe1 PE=2 SV=2

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 53/62 (85%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VFKRHGLEP++P+ +KFDPN HEALF++E +  E NTVV V+K+GYKL+ R IRPALVG+
Sbjct: 151 VFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGV 210

Query: 95  SK 96
           SK
Sbjct: 211 SK 212

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.
Drosophila melanogaster (taxid: 7227)

>sp|Q5RA81|GRPE1_PONAB GrpE protein homolog 1, mitochondrial OS=Pongo abelii GN=GRPEL1 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 47/62 (75%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VF +HGL  +NP+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query: 95  SK 96
            K
Sbjct: 214 VK 215

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Pongo abelii (taxid: 9601)

>sp|Q9HAV7|GRPE1_HUMAN GrpE protein homolog 1, mitochondrial OS=Homo sapiens GN=GRPEL1 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/62 (62%), Positives = 47/62 (75%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VF +HGL  +NP+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query: 95  SK 96
            K
Sbjct: 214 VK 215

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Homo sapiens (taxid: 9606)

>sp|Q3SZC1|GRPE1_BOVIN GrpE protein homolog 1, mitochondrial OS=Bos taurus GN=GRPEL1 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 47/63 (74%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VF +HGL  +NPLG KFDP  HEALF   VEGKE  TV +V+K+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLNPLGAKFDPYEHEALFHTPVEGKEPGTVALVNKVGYKLHGRTLRPALVGV 213

Query: 95  SKS 97
            K 
Sbjct: 214 VKG 216

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Bos taurus (taxid: 9913)

>sp|Q99LP6|GRPE1_MOUSE GrpE protein homolog 1, mitochondrial OS=Mus musculus GN=Grpel1 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VF +HGL  ++P+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query: 95  SKS 97
            K 
Sbjct: 214 VKD 216

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Mus musculus (taxid: 10090)

>sp|P97576|GRPE1_RAT GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus GN=Grpel1 PE=1 SV=2

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/63 (60%), Positives = 47/63 (74%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VF +HGL  ++P+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct: 154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query: 95  SKS 97
            K 
Sbjct: 214 VKD 216

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.

Rattus norvegicus (taxid: 10116)

>sp|Q6CRQ1|GRPE_KLULA GrpE protein homolog, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=mge1 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 42/62 (67%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             K+HG+E +NP+GE FDPN HEA FE     KE  TV  V +IGY L +RVIRPA VGI
Sbjct: 178 TLKKHGIEQLNPIGESFDPNKHEATFELPQPDKEPGTVFHVQQIGYTLNDRVIRPAKVGI 237

Query: 95  SK 96
            K
Sbjct: 238 VK 239

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|P38523|GRPE_YEAST GrpE protein homolog, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGE1 PE=1 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 43/63 (68%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           N  ++HG+E ++PLGE FDPN HEA FE     KE  TV  V ++G+ L +RVIRPA VG
Sbjct: 162 NTLRKHGIEKLDPLGEPFDPNKHEATFELPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVG 221

Query: 94  ISK 96
           I K
Sbjct: 222 IVK 224

Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins and the association of SSC1 with TIM44.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|A6WVA7|GRPE_OCHA4 Protein GrpE OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=grpE PE=3 SV=1

 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 44/62 (70%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             +RHG++ + P GEKFDPNFH+A+FE        NTVV V + GY + +RV+RPA+VG+
Sbjct: 151 ALERHGVKKLEPEGEKFDPNFHQAMFEVPNPDLPNNTVVQVVQDGYAIGDRVLRPAMVGV 210

Query: 95  SK 96
           SK
Sbjct: 211 SK 212

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) (taxid: 439375)

>sp|Q5GSA3|GRPE_WOLTR Protein GrpE OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=grpE PE=3 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           N  K+HG+E I+P+GE FD N H+A+ E+E   K+  T+V V + GY + NR++RPA+V 
Sbjct: 117 NDLKKHGIEEIDPIGELFDSNLHQAVVEREDNEKKTGTIVEVLQTGYTIKNRLLRPAMVI 176

Query: 94  ISK 96
           ISK
Sbjct: 177 ISK 179

Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with dnaK and grpE. It is the nucleotide exchange factor for dnaK and may function as a thermosensor. Unfolded proteins bind initially to dnaJ; upon interaction with the dnaJ-bound protein, dnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from dnaK; ATP binding to dnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between dnaJ, dnaK and grpE are required for fully efficient folding.

Wolbachia sp. subsp. Brugia malayi (strain TRS) (taxid: 292805)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
242010313	239	grpe protein, putative [Pediculus humanu	0.659	0.267	0.828	9e-25
332374942	218	unknown [Dendroctonus ponderosae]	0.773	0.344	0.706	2e-24
91093058	222	PREDICTED: similar to GrpE-like 1, mitoc	0.773	0.337	0.68	3e-23
312375535	160	hypothetical protein AND_14051 [Anophele	0.721	0.437	0.718	4e-22
157106034	226	hypothetical protein AaeL_AAEL004438 [Ae	0.773	0.331	0.666	1e-21
170043539	221	grpE [Culex quinquefasciatus] gi|1678668	0.896	0.393	0.608	2e-21
158287473	221	AGAP011150-PA [Anopheles gambiae str. PE	0.711	0.312	0.7	7e-21
340725766	235	PREDICTED: grpE protein homolog, mitocho	0.639	0.263	0.741	1e-20
328780331	237	PREDICTED: grpE protein homolog, mitocho	0.639	0.261	0.741	1e-20
350397263	270	PREDICTED: grpE protein homolog, mitocho	0.639	0.229	0.741	2e-20

>gi|242010313|ref|XP_002425913.1| grpe protein, putative [Pediculus humanus corporis] gi|212509889|gb|EEB13175.1| grpe protein, putative [Pediculus humanus corporis]

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 53/64 (82%), Positives = 59/64 (92%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           NVF+RHGL P+NPL EKFDPN HEALF+QEVEGKEA T+VVVSKIGYKL+ RVIRPALVG
Sbjct: 174 NVFRRHGLVPVNPLNEKFDPNLHEALFQQEVEGKEAGTIVVVSKIGYKLHERVIRPALVG 233

Query: 94  ISKS 97
           I+KS
Sbjct: 234 IAKS 237

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332374942|gb|AEE62612.1| unknown [Dendroctonus ponderosae]

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/75 (70%), Positives = 63/75 (84%)

Query: 22  YSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYK 81
           Y  +   + +  +VFKRHGLE +NPL EKFDPNFHEALF+QEVEGK A TVVVVSKIGYK
Sbjct: 144 YEGLIMTEAQLKSVFKRHGLEQVNPLNEKFDPNFHEALFQQEVEGKAAGTVVVVSKIGYK 203

Query: 82  LYNRVIRPALVGISK 96
           L++RV+RPALVG+SK
Sbjct: 204 LHDRVLRPALVGVSK 218

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91093058|ref|XP_967697.1| PREDICTED: similar to GrpE-like 1, mitochondrial [Tribolium castaneum] gi|270002666|gb|EEZ99113.1| hypothetical protein TcasGA2_TC005006 [Tribolium castaneum]

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 64/75 (85%)

Query: 22  YSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYK 81
           Y  +   + +  +VFKRHGLE +NPL EKF+PN+HEALF+QEVEGKE+ TVVVVSKIGYK
Sbjct: 148 YEGLVMTEAQLQSVFKRHGLECVNPLNEKFNPNYHEALFQQEVEGKESGTVVVVSKIGYK 207

Query: 82  LYNRVIRPALVGISK 96
           L++RVIRPALVG++K
Sbjct: 208 LHDRVIRPALVGVAK 222

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375535|gb|EFR22892.1| hypothetical protein AND_14051 [Anopheles darlingi]

 Score =  108 bits (271), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)

Query: 28  MKWKQAN-VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           M   Q N VF+RHGLEP+NPL EKF+PN HEALF+QEVE  E NTVVVVSKIGYKL++R 
Sbjct: 90  MTRAQLNSVFRRHGLEPVNPLNEKFNPNLHEALFQQEVENVEPNTVVVVSKIGYKLHDRC 149

Query: 87  IRPALVGISKS 97
           IRPALVG++K 
Sbjct: 150 IRPALVGVAKG 160

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157106034|ref|XP_001649137.1| hypothetical protein AaeL_AAEL004438 [Aedes aegypti] gi|108879963|gb|EAT44188.1| AAEL004438-PA [Aedes aegypti]

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 58/75 (77%)

Query: 22  YSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYK 81
           Y  +   K +   VFKRHGLE +NPL EKF+PN HEALF+QEV+  E NTVVVVSKIGYK
Sbjct: 151 YEGLTMTKAQLNQVFKRHGLETVNPLNEKFNPNLHEALFQQEVQNVEPNTVVVVSKIGYK 210

Query: 82  LYNRVIRPALVGISK 96
           L+ R IRPALVG+SK
Sbjct: 211 LHERCIRPALVGVSK 225

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043539|ref|XP_001849441.1| grpE [Culex quinquefasciatus] gi|167866847|gb|EDS30230.1| grpE [Culex quinquefasciatus]

 Score =  106 bits (265), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 5/92 (5%)

Query: 7   KNWMSDS--YLAQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEV 64
           K  +SDS  +L  L   Y  +   K +   VFKRHGLE +NPL EKF+PN HEALF+QEV
Sbjct: 132 KEEISDSNPHLKNL---YEGLTMTKAQLNQVFKRHGLEQVNPLNEKFNPNLHEALFQQEV 188

Query: 65  EGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
           +  E NTVVVVSKIGYKL+ R IRPALVG+SK
Sbjct: 189 QNVEPNTVVVVSKIGYKLHERCIRPALVGVSK 220

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287473|ref|XP_309497.4| AGAP011150-PA [Anopheles gambiae str. PEST] gi|157019667|gb|EAA05028.4| AGAP011150-PA [Anopheles gambiae str. PEST]

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/70 (70%), Positives = 58/70 (82%), Gaps = 1/70 (1%)

Query: 28  MKWKQAN-VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           M  +Q N VFKRHGLE +NP+ EKF+PN HEALF+QEV   E NTVVVVSKIGYKL++R 
Sbjct: 151 MTRQQLNSVFKRHGLETVNPMNEKFNPNLHEALFQQEVANVEPNTVVVVSKIGYKLHDRC 210

Query: 87  IRPALVGISK 96
           IRPALVG++K
Sbjct: 211 IRPALVGVTK 220

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725766|ref|XP_003401237.1| PREDICTED: grpE protein homolog, mitochondrial-like [Bombus terrestris]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 55/62 (88%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VFK+HGL  +NPL EKFDPN HEALF+QEVEGKE  T+VVVSK+GYKL+ RV+RPALVG+
Sbjct: 173 VFKKHGLISLNPLNEKFDPNQHEALFQQEVEGKEPGTIVVVSKLGYKLHERVVRPALVGV 232

Query: 95  SK 96
           +K
Sbjct: 233 AK 234

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328780331|ref|XP_624159.2| PREDICTED: grpE protein homolog, mitochondrial [Apis mellifera]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 55/62 (88%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VFK+HGL  +NPL EKFDPN HEALF+QEVEGKE  T+VVVSK+GYKL+ RV+RPALVG+
Sbjct: 175 VFKKHGLVSLNPLNEKFDPNQHEALFQQEVEGKEPGTIVVVSKLGYKLHERVVRPALVGV 234

Query: 95  SK 96
           +K
Sbjct: 235 AK 236

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350397263|ref|XP_003484824.1| PREDICTED: grpE protein homolog, mitochondrial-like [Bombus impatiens]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/62 (74%), Positives = 55/62 (88%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           VFK+HGL  +NPL EKFDPN HEALF+QEVEGKE  T+VVVSK+GYKL+ RV+RPALVG+
Sbjct: 208 VFKKHGLISLNPLNEKFDPNQHEALFQQEVEGKEPGTIVVVSKLGYKLHERVVRPALVGV 267

Query: 95  SK 96
           +K
Sbjct: 268 AK 269

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	97
FB|FBgn0014877	213	Roe1 "Roe1" [Drosophila melano	0.639	0.291	0.677	6.5e-19
UNIPROTKB|Q5ZHV6	222	GRPEL1 "GrpE protein homolog"	0.639	0.279	0.629	5.3e-17
UNIPROTKB|Q9HAV7	217	GRPEL1 "GrpE protein homolog 1	0.639	0.285	0.629	8.6e-17
UNIPROTKB|Q3SZC1	217	GRPEL1 "GrpE protein homolog 1	0.639	0.285	0.629	1.1e-16
UNIPROTKB|E2RAZ6	230	GRPEL1 "Uncharacterized protei	0.639	0.269	0.612	2.3e-16
MGI|MGI:1334417	217	Grpel1 "GrpE-like 1, mitochond	0.639	0.285	0.612	2.9e-16
RGD|70947	217	Grpel1 "GrpE-like 1, mitochond	0.639	0.285	0.612	2.9e-16
UNIPROTKB|I3LVG4	217	LOC100622145 "GrpE protein hom	0.639	0.285	0.612	3.7e-16
ZFIN|ZDB-GENE-051120-111	217	grpel1 "GrpE-like 1, mitochond	0.649	0.290	0.555	9.8e-16
SGD|S000005758	228	MGE1 "Mitochondrial matrix coc	0.649	0.276	0.539	4.4e-13

FB|FBgn0014877 Roe1 "Roe1" [Drosophila melanogaster (taxid:7227)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 42/62 (67%), Positives = 53/62 (85%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VFKRHGLEP++P+ +KFDPN HEALF++E +  E NTVV V+K+GYKL+ R IRPALVG+
Sbjct:   151 VFKRHGLEPLDPINQKFDPNQHEALFQKEDKTVEPNTVVEVTKLGYKLHERCIRPALVGV 210

Query:    95 SK 96
             SK
Sbjct:   211 SK 212

GO:0051082 "unfolded protein binding" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISS;NAS

GO:0006457 "protein folding" evidence=ISS;NAS

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006626 "protein targeting to mitochondrion" evidence=ISS;NAS

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q5ZHV6 GRPEL1 "GrpE protein homolog" [Gallus gallus (taxid:9031)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 39/62 (62%), Positives = 48/62 (77%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VFK+HGL  +NP+G KFDP  HEALF   +EGKE  T+ +VSKIGYKL+ R +RPALVG+
Sbjct:   159 VFKKHGLLRLNPVGAKFDPYEHEALFHAPMEGKEPGTIALVSKIGYKLHGRTLRPALVGV 218

Query:    95 SK 96
              K
Sbjct:   219 VK 220

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|Q9HAV7 GRPEL1 "GrpE protein homolog 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 39/62 (62%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  +NP+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct:   154 VFTKHGLLKLNPVGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query:    95 SK 96
              K
Sbjct:   214 VK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IDA

GO:0030150 "protein import into mitochondrial matrix" evidence=NAS

GO:0005759 "mitochondrial matrix" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|Q3SZC1 GRPEL1 "GrpE protein homolog 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 39/62 (62%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  +NPLG KFDP  HEALF   VEGKE  TV +V+K+GYKL+ R +RPALVG+
Sbjct:   154 VFTKHGLLRLNPLGAKFDPYEHEALFHTPVEGKEPGTVALVNKVGYKLHGRTLRPALVGV 213

Query:    95 SK 96
              K
Sbjct:   214 VK 215

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|E2RAZ6 GRPEL1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  +NP+G +FDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct:   167 VFTKHGLLRLNPVGARFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 226

Query:    95 SK 96
              K
Sbjct:   227 VK 228

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

MGI|MGI:1334417 Grpel1 "GrpE-like 1, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  ++P+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct:   154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query:    95 SK 96
              K
Sbjct:   214 VK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=ISO

GO:0051087 "chaperone binding" evidence=IEA

RGD|70947 Grpel1 "GrpE-like 1, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  ++P+G KFDP  HEALF   VEGKE  TV +VSK+GYKL+ R +RPALVG+
Sbjct:   154 VFTKHGLLRLDPIGAKFDPYEHEALFHTPVEGKEPGTVALVSKVGYKLHGRTLRPALVGV 213

Query:    95 SK 96
              K
Sbjct:   214 VK 215

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005759 "mitochondrial matrix" evidence=IEA;ISO

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

GO:0051087 "chaperone binding" evidence=IEA

UNIPROTKB|I3LVG4 LOC100622145 "GrpE protein homolog" [Sus scrofa (taxid:9823)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 38/62 (61%), Positives = 47/62 (75%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF +HGL  ++PLG KFDP  HEALF   VEGKE  TV +V+K+GYKL+ R +RPALVG+
Sbjct:   154 VFTKHGLLRLDPLGAKFDPYEHEALFHTPVEGKEPGTVALVNKVGYKLHGRTLRPALVGV 213

Query:    95 SK 96
              K
Sbjct:   214 VK 215

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

ZFIN|ZDB-GENE-051120-111 grpel1 "GrpE-like 1, mitochondrial" [Danio rerio (taxid:7955)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 35/63 (55%), Positives = 49/63 (77%)

Query:    35 VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
             VF++HGL  ++P G+KFDP  HEA+F   VEGKE  T+ +V+K+GYKL+ R +RPALVG+
Sbjct:   154 VFQKHGLVKLSPDGQKFDPYEHEAVFHAPVEGKEPGTIALVTKVGYKLHGRTLRPALVGV 213

Query:    95 SKS 97
              K+
Sbjct:   214 VKA 216

GO:0051087 "chaperone binding" evidence=IEA

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

SGD|S000005758 MGE1 "Mitochondrial matrix cochaperone" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 34/63 (53%), Positives = 43/63 (68%)

Query:    34 NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
             N  ++HG+E ++PLGE FDPN HEA FE     KE  TV  V ++G+ L +RVIRPA VG
Sbjct:   162 NTLRKHGIEKLDPLGEPFDPNKHEATFELPQPDKEPGTVFHVQQLGFTLNDRVIRPAKVG 221

Query:    94 ISK 96
             I K
Sbjct:   222 IVK 224

GO:0042026 "protein refolding" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0030150 "protein import into mitochondrial matrix" evidence=IMP

GO:0000774 "adenyl-nucleotide exchange factor activity" evidence=IEA;IDA;IMP

GO:0001405 "presequence translocase-associated import motor" evidence=IDA

GO:0005759 "mitochondrial matrix" evidence=IEA;IDA

GO:0051087 "chaperone binding" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q99LP6	GRPE1_MOUSE	No assigned EC number	0.6031	0.6494	0.2903	yes	N/A
Q5RA81	GRPE1_PONAB	No assigned EC number	0.6290	0.6391	0.2857	yes	N/A
Q6FPH2	GRPE_CANGA	No assigned EC number	0.5322	0.6391	0.2683	yes	N/A
P48604	GRPE_DROME	No assigned EC number	0.6774	0.6391	0.2910	yes	N/A
P97576	GRPE1_RAT	No assigned EC number	0.6031	0.6494	0.2903	yes	N/A
Q54QF9	GRPE_DICDI	No assigned EC number	0.5161	0.6391	0.2910	yes	N/A
P38523	GRPE_YEAST	No assigned EC number	0.5396	0.6494	0.2763	yes	N/A
Q3SZC1	GRPE1_BOVIN	No assigned EC number	0.6190	0.6494	0.2903	yes	N/A
Q6BTP9	GRPE_DEBHA	No assigned EC number	0.5147	0.6597	0.2633	yes	N/A
Q3SIN5	GRPE_THIDA	No assigned EC number	0.5238	0.6185	0.3468	yes	N/A
Q9HAV7	GRPE1_HUMAN	No assigned EC number	0.6290	0.6391	0.2857	yes	N/A
Q6CRQ1	GRPE_KLULA	No assigned EC number	0.5806	0.6391	0.2551	yes	N/A
Q75C01	GRPE_ASHGO	No assigned EC number	0.5166	0.6185	0.2830	yes	N/A
A6WVA7	GRPE_OCHA4	No assigned EC number	0.5161	0.6391	0.2719	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	97
cd00446	137	cd00446, GrpE, GrpE is the adenine nucleotide exch	4e-29
pfam01025	165	pfam01025, GrpE, GrpE	5e-28
COG0576	193	COG0576, GrpE, Molecular chaperone GrpE (heat shoc	3e-26
PRK14141	209	PRK14141, PRK14141, heat shock protein GrpE; Provi	5e-20
PRK14139	185	PRK14139, PRK14139, heat shock protein GrpE; Provi	9e-18
PRK14150	193	PRK14150, PRK14150, heat shock protein GrpE; Provi	4e-17
PRK14140	191	PRK14140, PRK14140, heat shock protein GrpE; Provi	7e-17
PRK14151	176	PRK14151, PRK14151, heat shock protein GrpE; Provi	7e-16
PRK14155	208	PRK14155, PRK14155, heat shock protein GrpE; Provi	3e-14
PRK14153	194	PRK14153, PRK14153, heat shock protein GrpE; Provi	2e-13
PRK14144	199	PRK14144, PRK14144, heat shock protein GrpE; Provi	3e-13
PRK14149	191	PRK14149, PRK14149, heat shock protein GrpE; Provi	7e-13
PRK14145	196	PRK14145, PRK14145, heat shock protein GrpE; Provi	3e-11
PRK14147	172	PRK14147, PRK14147, heat shock protein GrpE; Provi	7e-11
PRK14159	176	PRK14159, PRK14159, heat shock protein GrpE; Provi	1e-10
PRK14158	194	PRK14158, PRK14158, heat shock protein GrpE; Provi	1e-10
PRK14143	238	PRK14143, PRK14143, heat shock protein GrpE; Provi	1e-10
PRK14162	194	PRK14162, PRK14162, heat shock protein GrpE; Provi	2e-10
PRK14148	195	PRK14148, PRK14148, heat shock protein GrpE; Provi	3e-10
PRK14161	178	PRK14161, PRK14161, heat shock protein GrpE; Provi	1e-09
PRK14154	208	PRK14154, PRK14154, heat shock protein GrpE; Provi	6e-09
PRK14163	214	PRK14163, PRK14163, heat shock protein GrpE; Provi	2e-07
PRK14164	218	PRK14164, PRK14164, heat shock protein GrpE; Provi	3e-07
PRK14157	227	PRK14157, PRK14157, heat shock protein GrpE; Provi	3e-07
PRK14142	223	PRK14142, PRK14142, heat shock protein GrpE; Provi	8e-07
PRK10325	197	PRK10325, PRK10325, heat shock protein GrpE; Provi	1e-06
PRK14160	211	PRK14160, PRK14160, heat shock protein GrpE; Provi	4e-06
PRK14156	177	PRK14156, PRK14156, heat shock protein GrpE; Provi	5e-06

>gnl|CDD|238252 cd00446, GrpE, GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

 Score =  101 bits (253), Expect = 4e-29
 Identities = 30/61 (49%), Positives = 41/61 (67%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           +V ++HG+E I P GE FDPN HEA+ +      E  TVV V + GYKL +RV+RPA+V 
Sbjct: 77  DVLEKHGVEKIEPEGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRPAMVV 136

Query: 94  I 94
           +
Sbjct: 137 V 137

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Length = 137

>gnl|CDD|216249 pfam01025, GrpE, GrpE

 Score = 99.2 bits (248), Expect = 5e-28
 Identities = 32/63 (50%), Positives = 44/63 (69%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
            V ++HG+E I P GE FDPN HEA+ +   + K   TVV V + GYKL++RV+RPA+V 
Sbjct: 103 KVLEKHGVEKIEPEGEPFDPNLHEAVSQVPSDEKPPGTVVEVLQKGYKLHDRVLRPAMVV 162

Query: 94  ISK 96
           +SK
Sbjct: 163 VSK 165

Length = 165

>gnl|CDD|223649 COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

 Score = 95.5 bits (238), Expect = 3e-26
 Identities = 33/64 (51%), Positives = 44/64 (68%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           +  ++ G+E I P GEKFDPN HEA+   E E  E NTVV V + GYKL +RV+RPA+V 
Sbjct: 129 DALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKLNDRVLRPAMVK 188

Query: 94  ISKS 97
           ++K 
Sbjct: 189 VAKK 192

Length = 193

>gnl|CDD|172630 PRK14141, PRK14141, heat shock protein GrpE; Provisional

 Score = 79.7 bits (197), Expect = 5e-20
 Identities = 31/63 (49%), Positives = 45/63 (71%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           N  +RHG++ ++P G+KFDPNFH+A+FE        NTVV V + GY +  RV+RPA+VG
Sbjct: 129 NALERHGVKKLDPEGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVG 188

Query: 94  ISK 96
           ++K
Sbjct: 189 VAK 191

Length = 209

>gnl|CDD|237621 PRK14139, PRK14139, heat shock protein GrpE; Provisional

 Score = 73.5 bits (181), Expect = 9e-18
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 2/67 (2%)

Query: 31  KQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRP 89
           KQ  + F++  +  INP+GEKFDP+ H+A+     E  E NTVV V + GY + +RV+RP
Sbjct: 118 KQLTSAFEKGRVVEINPVGEKFDPHQHQAISMVPAEQ-EPNTVVAVLQKGYTIADRVLRP 176

Query: 90  ALVGISK 96
           ALV ++ 
Sbjct: 177 ALVTVAA 183

Length = 185

>gnl|CDD|184539 PRK14150, PRK14150, heat shock protein GrpE; Provisional

 Score = 71.5 bits (176), Expect = 4e-17
 Identities = 27/59 (45%), Positives = 41/59 (69%)

Query: 38  RHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
           + G+E + P+GE F+P  H+A+  QE E  E NTV++V + GY L  R++RPA+V +SK
Sbjct: 135 KFGVEVVGPVGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLLRPAMVMVSK 193

Length = 193

>gnl|CDD|237622 PRK14140, PRK14140, heat shock protein GrpE; Provisional

 Score = 71.2 bits (175), Expect = 7e-17
 Identities = 28/59 (47%), Positives = 40/59 (67%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALV 92
              K+ G+E I  +GE+FDPN H+A+ + E E  E+N VV   + GYKL +RVIRP++V
Sbjct: 129 EALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIRPSMV 187

Length = 191

>gnl|CDD|172640 PRK14151, PRK14151, heat shock protein GrpE; Provisional

 Score = 68.3 bits (167), Expect = 7e-16
 Identities = 27/61 (44%), Positives = 41/61 (67%)

Query: 37  KRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
           KR+ LE ++P GE F+P  H+A+  QE    E N+V+ V + GY L  R++RPA+V +SK
Sbjct: 116 KRYQLEAVDPHGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVVSK 175

Query: 97  S 97
           +
Sbjct: 176 A 176

Length = 176

>gnl|CDD|237627 PRK14155, PRK14155, heat shock protein GrpE; Provisional

 Score = 64.6 bits (157), Expect = 3e-14
 Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)

Query: 36  FKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           F+R+GL+ I+P  G+KFDP+ H+A+ EQ      A  V+ V + GY+L  R++RPA+V +
Sbjct: 110 FERNGLKKIDPAKGDKFDPHLHQAMMEQPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAV 169

Query: 95  S 95
           +
Sbjct: 170 A 170

Length = 208

>gnl|CDD|184540 PRK14153, PRK14153, heat shock protein GrpE; Provisional

 Score = 62.2 bits (151), Expect = 2e-13
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)

Query: 28  MKWKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           M  KQ  ++ +++GLE I   GE+FDP+ HEA+   E      NT+V V K GY L ++V
Sbjct: 118 MVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGYALNSKV 177

Query: 87  IRPALVGISKS 97
           IRPA+V ++++
Sbjct: 178 IRPAMVSVARN 188

Length = 194

>gnl|CDD|184535 PRK14144, PRK14144, heat shock protein GrpE; Provisional

 Score = 61.7 bits (149), Expect = 3e-13
 Identities = 28/63 (44%), Positives = 40/63 (63%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           +  ++  +E I+PLG+ FDP  HEA+  Q   G   N+V+ V + GYKL +RVIRPA V 
Sbjct: 136 DALQKFDVEQIDPLGQTFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARVI 195

Query: 94  ISK 96
           +S 
Sbjct: 196 VST 198

Length = 199

>gnl|CDD|184538 PRK14149, PRK14149, heat shock protein GrpE; Provisional

 Score = 60.7 bits (147), Expect = 7e-13
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           V  RHG+E I  L E FDPNFH A+ + + E KE   +V V + GYK   RV+RPA+V I
Sbjct: 129 VLARHGIEGIECLEE-FDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSI 187

Query: 95  SKS 97
           +K+
Sbjct: 188 AKN 190

Length = 191

>gnl|CDD|184536 PRK14145, PRK14145, heat shock protein GrpE; Provisional

 Score = 56.5 bits (136), Expect = 3e-11
 Identities = 25/62 (40%), Positives = 42/62 (67%)

Query: 35  VFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI 94
           +  + G++ I   G+ FDP  H A+ ++EVEGK+ N ++ V + GY L ++VIRP+LV +
Sbjct: 135 ILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNEIIEVFQKGYYLKDKVIRPSLVKV 194

Query: 95  SK 96
           +K
Sbjct: 195 AK 196

Length = 196

>gnl|CDD|237625 PRK14147, PRK14147, heat shock protein GrpE; Provisional

 Score = 55.0 bits (132), Expect = 7e-11
 Identities = 24/58 (41%), Positives = 38/58 (65%)

Query: 39  HGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
           +GL  ++P+G+ F+P  H+A+ + E EG     VV V + GY L  R++RPALV ++K
Sbjct: 113 NGLTLLDPVGQPFNPEHHQAISQGEAEGVAPGHVVQVFQKGYLLNERLLRPALVVVAK 170

Length = 172

>gnl|CDD|172647 PRK14159, PRK14159, heat shock protein GrpE; Provisional

 Score = 54.7 bits (131), Expect = 1e-10
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 36  FKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGIS 95
            ++HG+  I    E FDPN HEA+F  + E  ++  VV V + GYK+ +RVIRP  V ++
Sbjct: 117 LEKHGVALIKEEKE-FDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTKVSVA 175

Query: 96  K 96
           K
Sbjct: 176 K 176

Length = 176

>gnl|CDD|172646 PRK14158, PRK14158, heat shock protein GrpE; Provisional

 Score = 54.9 bits (132), Expect = 1e-10
 Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)

Query: 37  KRHGLEPIN-PLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGIS 95
           K+ G+ P+    G  FDP +H+A+ + E   +E NTVV V + GY L  R++RPA+V ++
Sbjct: 134 KKFGVTPVEAEKGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLRPAMVSVA 193

Query: 96  K 96
            
Sbjct: 194 T 194

Length = 194

>gnl|CDD|237624 PRK14143, PRK14143, heat shock protein GrpE; Provisional

 Score = 55.5 bits (134), Expect = 1e-10
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 30  WKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIR 88
           +KQ  +V KR G+ P+  +G++FDPN HEA+  +  +    + V+   + GY L  RV+R
Sbjct: 155 YKQLVDVLKRLGVSPMRVVGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHLGGRVLR 214

Query: 89  PALVGIS 95
            A+V +S
Sbjct: 215 HAMVKVS 221

Length = 238

>gnl|CDD|237631 PRK14162, PRK14162, heat shock protein GrpE; Provisional

 Score = 54.1 bits (130), Expect = 2e-10
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 37  KRHGLEPINPLGEKFDPNFHEALFEQEVEGKE-ANTVVVVSKIGYKLYNRVIRPALV 92
           K HG+  I   GEKFDP  H+A+     E  +  + VV V + GY+  +R +RPA+V
Sbjct: 134 KDHGVTEIKADGEKFDPTLHQAVQTVAAENDDQKDHVVQVLQKGYQYKDRTLRPAMV 190

Length = 194

>gnl|CDD|172637 PRK14148, PRK14148, heat shock protein GrpE; Provisional

 Score = 53.6 bits (128), Expect = 3e-10
 Identities = 27/64 (42%), Positives = 40/64 (62%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           ++ K++G+E ++P GEKFDPN HEA+        E NT+  V + GY L  R++R A V 
Sbjct: 132 DILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYMLNGRIVRAAKVV 191

Query: 94  ISKS 97
           I K+
Sbjct: 192 IVKN 195

Length = 195

>gnl|CDD|237630 PRK14161, PRK14161, heat shock protein GrpE; Provisional

 Score = 51.9 bits (124), Expect = 1e-09
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 35  VFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           VF +H +E I P +G  FD N H A+ + E      N+++ + + GYK+ +R++RPA V 
Sbjct: 114 VFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDRLLRPATVQ 173

Query: 94  ISK 96
           + K
Sbjct: 174 VVK 176

Length = 178

>gnl|CDD|237626 PRK14154, PRK14154, heat shock protein GrpE; Provisional

 Score = 50.6 bits (120), Expect = 6e-09
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 34  NVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALV 92
           N   +HG++ INP  G+ FDP  HEA+  Q V   + +T++ V + GY+L  RV+R A V
Sbjct: 145 NTLAKHGVQVINPNPGDPFDPALHEAMSVQAVPDAKPDTIIQVLQKGYQLNGRVLRAARV 204

Length = 208

>gnl|CDD|184546 PRK14163, PRK14163, heat shock protein GrpE; Provisional

 Score = 45.9 bits (108), Expect = 2e-07
 Identities = 21/57 (36%), Positives = 29/57 (50%)

Query: 40  GLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
           GL+     GE FDP  HEAL           T V + + GY++  R IRPA V +++
Sbjct: 131 GLQQFGKEGEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRIGERTIRPARVAVAE 187

Length = 214

>gnl|CDD|237632 PRK14164, PRK14164, heat shock protein GrpE; Provisional

 Score = 45.9 bits (109), Expect = 3e-07
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 31  KQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPA 90
           K  NV     +E     G+ FDP  HEA+  Q++   +   +  V + GY++ +RV+R A
Sbjct: 153 KLTNVLAGLKVEKFGEEGDAFDPEIHEAV--QDLSSGDEKVLGTVLRKGYRMGDRVLRTA 210

Query: 91  LVGI 94
           +V I
Sbjct: 211 MVII 214

Length = 218

>gnl|CDD|184543 PRK14157, PRK14157, heat shock protein GrpE; Provisional

 Score = 46.1 bits (109), Expect = 3e-07
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 13/87 (14%)

Query: 10  MSDSYLAQLT-IDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKE 68
           M DS+ A    ID              F++ G+E     GE FDP  H+A+  +     E
Sbjct: 149 MDDSFKAVAAKID------------KAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAE 196

Query: 69  ANTVVVVSKIGYKLYNRVIRPALVGIS 95
             TV  V + GY++ +RVIR A V ++
Sbjct: 197 KETVDTVVEAGYRIGDRVIRAARVVVA 223

Length = 227

>gnl|CDD|237623 PRK14142, PRK14142, heat shock protein GrpE; Provisional

 Score = 44.6 bits (105), Expect = 8e-07
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 40  GLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVV--VSKIGYKLYNRVIRPALVGI 94
           GL      GE FDP  HEA+ + E +G + +  V+  V + GY+L  +V+R ALVG+
Sbjct: 125 GLVAFGAEGEDFDPVLHEAV-QHEGDGGQGSKPVIGTVMRQGYQLGEQVLRHALVGV 180

Length = 223

>gnl|CDD|182379 PRK10325, PRK10325, heat shock protein GrpE; Provisional

 Score = 44.3 bits (104), Expect = 1e-06
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           +V ++ G+E I       DPN H+A+   E +      V+ + + GY L  R IR A+V 
Sbjct: 132 DVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVT 191

Query: 94  ISKS 97
           ++K+
Sbjct: 192 VAKA 195

Length = 197

>gnl|CDD|237629 PRK14160, PRK14160, heat shock protein GrpE; Provisional

 Score = 42.4 bits (100), Expect = 4e-06
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 28  MKWKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           M  KQ     ++ G+E I     +FDPN H A+   E E    N +V V + GYK  ++V
Sbjct: 143 MTVKQFKTSLEKLGVEEI-STEGEFDPNLHNAVMHVEDENYGENEIVEVFQKGYKRGDKV 201

Query: 87  IRPALVGISK 96
           IR ++V ++ 
Sbjct: 202 IRYSMVKVAN 211

Length = 211

>gnl|CDD|237628 PRK14156, PRK14156, heat shock protein GrpE; Provisional

 Score = 42.1 bits (99), Expect = 5e-06
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKE---ANTVVVVSKIGYKLYNRVIRPA 90
              K  G+E +    + FD N H A+  Q +   +   A+++  V + GYKL+ R++RPA
Sbjct: 116 QALKEEGVEEVA--VDSFDHNLHMAV--QTLPADDEHPADSIAQVFQKGYKLHERLLRPA 171

Query: 91  LV 92
           +V
Sbjct: 172 MV 173

Length = 177

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	97
PRK14147	172	heat shock protein GrpE; Provisional	99.97
PRK14148	195	heat shock protein GrpE; Provisional	99.97
PRK14151	176	heat shock protein GrpE; Provisional	99.97
COG0576	193	GrpE Molecular chaperone GrpE (heat shock protein)	99.97
PRK14150	193	heat shock protein GrpE; Provisional	99.97
PRK10325	197	heat shock protein GrpE; Provisional	99.97
PRK14153	194	heat shock protein GrpE; Provisional	99.97
PRK14161	178	heat shock protein GrpE; Provisional	99.97
PRK14141	209	heat shock protein GrpE; Provisional	99.97
PRK14140	191	heat shock protein GrpE; Provisional	99.97
PRK14145	196	heat shock protein GrpE; Provisional	99.97
PRK14155	208	heat shock protein GrpE; Provisional	99.97
PRK14158	194	heat shock protein GrpE; Provisional	99.97
PRK14144	199	heat shock protein GrpE; Provisional	99.96
PRK14162	194	heat shock protein GrpE; Provisional	99.96
PRK14139	185	heat shock protein GrpE; Provisional	99.96
PRK14159	176	heat shock protein GrpE; Provisional	99.96
PRK14163	214	heat shock protein GrpE; Provisional	99.96
PRK14146	215	heat shock protein GrpE; Provisional	99.96
PRK14149	191	heat shock protein GrpE; Provisional	99.96
PRK14143	238	heat shock protein GrpE; Provisional	99.96
PRK14154	208	heat shock protein GrpE; Provisional	99.96
PRK14160	211	heat shock protein GrpE; Provisional	99.96
PF01025	165	GrpE: GrpE; InterPro: IPR000740 Molecular chaperon	99.96
PRK14157	227	heat shock protein GrpE; Provisional	99.95
cd00446	137	GrpE GrpE is the adenine nucleotide exchange facto	99.95
PRK14156	177	heat shock protein GrpE; Provisional	99.94
PRK14142	223	heat shock protein GrpE; Provisional	99.94
PRK14164	218	heat shock protein GrpE; Provisional	99.93
KOG3003|consensus	236		99.93

>PRK14147 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2e-31  Score=191.79  Aligned_cols=80  Identities=31%  Similarity=0.441  Sum_probs=77.1

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus        92 ~~~l~~Gv~mi~k~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~RvLRpA~V~Vak~  171 (172)
T PRK14147         92 PSPLRDGLELTYKQLLKVAADNGLTLLDPVGQPFNPEHHQAISQGEAEGVAPGHVVQVFQKGYLLNERLLRPALVVVAKQ  171 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeccCceEEeCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999984

>PRK14148 heat shock protein GrpE; Provisional

Probab=99.97  E-value=3e-31  Score=194.14  Aligned_cols=80  Identities=34%  Similarity=0.431  Sum_probs=77.3

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+|+
T Consensus       116 ~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vak~  195 (195)
T PRK14148        116 AIAMKEGIELTAKMLVDILKKNGVEELDPKGEKFDPNLHEAMAMIPNPEFEDNTIFDVFQKGYMLNGRIVRAAKVVIVKN  195 (195)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEeeeccEEEeCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999985

>PRK14151 heat shock protein GrpE; Provisional

Probab=99.97  E-value=4.9e-31  Score=190.41  Aligned_cols=80  Identities=35%  Similarity=0.460  Sum_probs=77.3

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++.
T Consensus        97 ~~~~~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtI~~v~qkGY~l~dRvLRpA~V~Vak~  176 (176)
T PRK14151         97 IKPMREGVELTLKMFQDTLKRYQLEAVDPHGEPFNPEHHQAMAMQESADVEPNSVLKVFQKGYLLNGRLLRPAMVVVSKA  176 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhcceeeCCCCCCcCeEEEEeeCCcEECCEEecCcEEEecCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999973

>COG0576 GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=4.8e-31  Score=192.55  Aligned_cols=79  Identities=43%  Similarity=0.576  Sum_probs=76.9

Q ss_pred             hccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          19 TIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        19 ~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      +++.+|++||+++|.++|+++||+.|++.|+.|||++||||+++++++.++|+|++|+|+||++||||||||+|+|+++
T Consensus       114 ~~l~~Gvem~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRVLRpA~V~Vak~  192 (193)
T COG0576         114 KALLEGVEMTLDQLLDALEKLGVEEIGPEGEKFDPNLHEAVQRVESEDVEPNTVVEVLQKGYKLNDRVLRPAMVKVAKK  192 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhheeeecCCCCCCCeEEEEeecCeeeCCEeccceEEEEecC
Confidence            6789999999999999999999999999999999999999999999999999999999999999999999999999974

>PRK14150 heat shock protein GrpE; Provisional

Probab=99.97  E-value=6.3e-31  Score=192.04  Aligned_cols=79  Identities=37%  Similarity=0.534  Sum_probs=76.6

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+|
T Consensus       115 ~~~~~~Gv~mi~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtI~~v~q~GY~l~drvLRpA~V~Vsk  193 (193)
T PRK14150        115 LKALIEGVELTLKSLLDTVAKFGVEVVGPVGEPFNPEVHQAISMQESEDHEPNTVMMVMQKGYTLNGRLLRPAMVMVSK  193 (193)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCCHhHcceeeeeCCCCCCcCEEEEEeeCCeEeCCEEecceEEEeCC
Confidence            4678999999999999999999999999999999999999999999999999999999999999999999999999986

>PRK10325 heat shock protein GrpE; Provisional

Probab=99.97  E-value=6.9e-31  Score=192.34  Aligned_cols=80  Identities=25%  Similarity=0.357  Sum_probs=77.3

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus       116 ~~~l~~Gv~m~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HEAv~~~~~~~~~~~~Vv~v~qkGY~l~drvlRpA~V~Vsk~  195 (197)
T PRK10325        116 MSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA  195 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEeCCEeccCceEEeCCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999974

>PRK14153 heat shock protein GrpE; Provisional

Probab=99.97  E-value=8.7e-31  Score=191.62  Aligned_cols=80  Identities=34%  Similarity=0.501  Sum_probs=77.2

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+||+||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus       109 ~~~l~~Gvemi~k~~~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRPA~V~Vak~  188 (194)
T PRK14153        109 MNSIVEGIEMVSKQFFSILEKYGLERIECEGEEFDPHRHEAMMHVETSEVPDNTIVDVCKPGYALNSKVIRPAMVSVARN  188 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChhHhceeeeeCCCCCCcCEEEEEeeCCcEeCCEEeeCcEEEECCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999984

>PRK14161 heat shock protein GrpE; Provisional

Probab=99.97  E-value=8.2e-31  Score=189.57  Aligned_cols=80  Identities=33%  Similarity=0.513  Sum_probs=76.9

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~-~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|++ +|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus        97 ~~~~~~Gv~mi~k~l~~vL~~~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~v~q~GY~l~dRVLRpA~V~Vak  176 (178)
T PRK14161         97 VTNIIAGVQMTKDELDKVFHKHHIEEIKPEIGSMFDYNLHNAISQIEHPDHAPNSIITLMQSGYKIRDRLLRPATVQVVK  176 (178)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeeCCCCCCcCEEEEEeeCCcEeCCEeecCceEEeCC
Confidence            46789999999999999999999999999 79999999999999999999999999999999999999999999999998


Q ss_pred             C
Q psy2068          97 S   97 (97)
Q Consensus        97 ~   97 (97)
                      +
T Consensus       177 ~  177 (178)
T PRK14161        177 K  177 (178)
T ss_pred             C
Confidence            4

>PRK14141 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.1e-30  Score=192.96  Aligned_cols=80  Identities=41%  Similarity=0.654  Sum_probs=77.5

Q ss_pred             hhhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          17 QLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        17 ~~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .++++.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus       112 ~~~~l~eGv~mi~k~l~~vLek~GV~~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vsk  191 (209)
T PRK14141        112 GLKALIEGVEMTERAMLNALERHGVKKLDPEGQKFDPNFHQAMFEVPNPDVPNNTVVQVVQAGYTIGERVLRPAMVGVAK  191 (209)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHhceeeeecCCCCCcCEEEEEeeCCcEeCCEeecccEEEECC
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999997

>PRK14140 heat shock protein GrpE; Provisional

Probab=99.97  E-value=1.1e-30  Score=190.71  Aligned_cols=79  Identities=37%  Similarity=0.561  Sum_probs=76.6

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|||++|+|+||+++|||||||+|+|++
T Consensus       113 ~~~i~~Gv~mi~k~l~~~L~k~GV~~i~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vak  191 (191)
T PRK14140        113 TKSLLKGVEMVHRQLLEALKKEGVEVIEAVGEQFDPNLHQAVMQDEDEDFESNEVVEELQKGYKLKDRVIRPSMVKVNQ  191 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEeeCCCCCCCChHHhccceeeCCCCCCcCeEEEEeeCCeEeCCEEecCcEEEeCC
Confidence            4778999999999999999999999999999999999999999999999999999999999999999999999999986

>PRK14145 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2.6e-30  Score=189.38  Aligned_cols=79  Identities=32%  Similarity=0.523  Sum_probs=76.0

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|++.|++|||++|||++++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus       118 ~~~l~~Gv~mi~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRPA~V~Vak  196 (196)
T PRK14145        118 YNSLKEGIELIYRQFKKILDKFGVKEIEAEGQIFDPYKHHAVMQEEVEGKQPNEIIEVFQKGYYLKDKVIRPSLVKVAK  196 (196)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCchhhheeeeeCCCCCCcCEEEEEeeCCcEeCCEeeccceEEeCC
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999999999986

>PRK14155 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2.8e-30  Score=190.61  Aligned_cols=79  Identities=34%  Similarity=0.562  Sum_probs=76.7

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~-~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+.+.+|++||+++|.++|+++||++|++ +|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus        92 ~~~i~~Gvemi~k~~~~~L~k~GV~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVi~V~qkGY~l~dRVLRPA~V~Vak  171 (208)
T PRK14155         92 VKNFIIGVEMTEKELLGAFERNGLKKIDPAKGDKFDPHLHQAMMEQPSTEVAAGGVLQVMQAGYELMGRLVRPAMVAVAA  171 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCceecCCCCCCCChhHhceeeeecCCCCCcCeEEEEeeCCeEeCCEeeccceEEECC
Confidence            57789999999999999999999999999 89999999999999999999999999999999999999999999999998

>PRK14158 heat shock protein GrpE; Provisional

Probab=99.97  E-value=2.2e-30  Score=189.52  Aligned_cols=79  Identities=30%  Similarity=0.521  Sum_probs=76.3

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~-~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|++ +|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+|
T Consensus       115 ~~~i~~Gv~mi~k~l~~vLek~Gv~~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~VsK  194 (194)
T PRK14158        115 MSAIIEGIRMTLSMLLSTLKKFGVTPVEAEKGTPFDPAYHQAMCQVESAEQEPNTVVAVFQKGYLLNERLLRPAMVSVAT  194 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChHHhhhheeecCCCCCcCEEEEEeeCCcEeCCEEeecceeEeCC
Confidence            46789999999999999999999999998 79999999999999999999999999999999999999999999999986

>PRK14144 heat shock protein GrpE; Provisional

Probab=99.96  E-value=3.9e-30  Score=188.78  Aligned_cols=79  Identities=35%  Similarity=0.470  Sum_probs=76.3

Q ss_pred             hccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          19 TIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        19 ~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .++.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++.
T Consensus       121 ~~i~~Gv~mi~k~l~~~L~k~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Vskk  199 (199)
T PRK14144        121 PSMHEGLELTMKLFLDALQKFDVEQIDPLGQTFDPQQHEAMSMQPAPGAPPNSVITVFQKGYKLSDRVIRPARVIVSTK  199 (199)
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeeCCCCCCcCeEEEEeeCCcEECCEEecccEEEecCC
Confidence            4678999999999999999999999999999999999999999999999999999999999999999999999999974

>PRK14162 heat shock protein GrpE; Provisional

Probab=99.96  E-value=3.5e-30  Score=188.42  Aligned_cols=79  Identities=30%  Similarity=0.424  Sum_probs=75.2

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecC-CCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVE-GKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~-~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+.+.+|++||+++|.++|+++||++|+++|++|||++||||++++++ +.++|+|++|+|+||+++|||||||+|+|++
T Consensus       115 ~~~l~~Gvemi~k~l~~vL~~~GV~~I~~~G~~FDP~~HEAv~~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~Vak  194 (194)
T PRK14162        115 AKQLKKGVQMTLDHLVKALKDHGVTEIKADGEKFDPTLHQAVQTVAAENDDQKDHVVQVLQKGYQYKDRTLRPAMVVVAQ  194 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhhhheeecCCCCCCcCEEEEEeeCCcEeCCEeeecceEEeCC
Confidence            467899999999999999999999999999999999999999999975 6789999999999999999999999999986

>PRK14139 heat shock protein GrpE; Provisional

Probab=99.96  E-value=3.9e-30  Score=187.03  Aligned_cols=79  Identities=37%  Similarity=0.503  Sum_probs=75.1

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+.+.+|++||+++|.++|+++||++|+++|++|||++||||+++++ +.++|+|++|+|+||+++|||||||+|+|++.
T Consensus       106 ~~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G~~FDP~~HEAv~~~~~-~~~~gtVi~V~qkGY~l~dRVLRPA~V~Vak~  184 (185)
T PRK14139        106 LEKLREGVELTLKQLTSAFEKGRVVEINPVGEKFDPHQHQAISMVPA-EQEPNTVVAVLQKGYTIADRVLRPALVTVAAP  184 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCceeCCCCCCCChHHhheeeeecC-CCCcCEEEEEeeCCcEeCCEeccCceEEeCCC
Confidence            46689999999999999999999999999999999999999999998 56899999999999999999999999999974

>PRK14159 heat shock protein GrpE; Provisional

Probab=99.96  E-value=3e-30  Score=186.41  Aligned_cols=77  Identities=34%  Similarity=0.467  Sum_probs=74.4

Q ss_pred             hccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          19 TIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        19 ~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      +++.+|++||+++|.++|+++||++|++.| +|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus       100 ~~l~~Gv~mi~k~l~~vL~k~Gv~~I~~~G-~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~dRVLRpA~V~Vak  176 (176)
T PRK14159        100 LKIKEGVQNTLDLFLKKLEKHGVALIKEEK-EFDPNLHEAMFHVDSENHQSGEVVQVLQKGYKIADRVIRPTKVSVAK  176 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCEecCCCC-CCChHHhhhhheeCCCCCCcCeEEEEeeCCcEeCCEeeecceeEeCC
Confidence            568999999999999999999999999999 69999999999999999999999999999999999999999999986

>PRK14163 heat shock protein GrpE; Provisional

Probab=99.96  E-value=5.2e-30  Score=189.84  Aligned_cols=78  Identities=27%  Similarity=0.381  Sum_probs=75.8

Q ss_pred             ccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          20 IDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        20 ~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+..|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus       111 ~l~~Gv~mi~k~l~~~L~k~Gv~~I~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~RVLRPA~V~Vsk~  188 (214)
T PRK14163        111 ELVGGFKSVAESLETTVAKLGLQQFGKEGEPFDPTIHEALMHSYAPDVTETTCVAILQPGYRIGERTIRPARVAVAEP  188 (214)
T ss_pred             hHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCcCcCCEeccCceEEECCC
Confidence            578999999999999999999999999999999999999999999999999999999999999999999999999984

>PRK14146 heat shock protein GrpE; Provisional

Probab=99.96  E-value=6.4e-30  Score=189.44  Aligned_cols=80  Identities=30%  Similarity=0.314  Sum_probs=76.8

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCC----EEeeeceEE
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYN----RVIRPALVG   93 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~----rvLRpA~V~   93 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|+|++|+|+||+++|    ||||||+|+
T Consensus       130 ~~~l~~Gv~mi~k~l~~~L~k~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~g~Vv~v~qkGY~l~~r~~~RvLRpA~V~  209 (215)
T PRK14146        130 LKPFVEGVKMILKEFYSVLEKSNVIRFDPKGEPFDPMSMEALSSEEGDQYSEETVIDVYQAGYYYKENEDKFTLRPARVR  209 (215)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCcCeeeCCCCCCCChhHhceeeeecCCCCCcCEEEEEeeCCeEeCCccCCeeccCceEE
Confidence            4778999999999999999999999999999999999999999999999999999999999999999    699999999


Q ss_pred             eecC
Q psy2068          94 ISKS   97 (97)
Q Consensus        94 V~k~   97 (97)
                      |+++
T Consensus       210 Vak~  213 (215)
T PRK14146        210 IGKP  213 (215)
T ss_pred             eCCC
Confidence            9974

>PRK14149 heat shock protein GrpE; Provisional

Probab=99.96  E-value=1.2e-29  Score=185.29  Aligned_cols=79  Identities=39%  Similarity=0.547  Sum_probs=75.5

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|++.| +|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus       112 ~~~l~~Gv~mi~k~l~~vL~k~GV~~I~~~G-~FDP~~HEAv~~v~~~~~~~gtVv~V~QkGY~l~dRVLRPA~V~Vak~  190 (191)
T PRK14149        112 ESALTKGLELTMEKLHEVLARHGIEGIECLE-EFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKN  190 (191)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhheeeeecCCCCCcCEEEEEeeCCcEeCCEEeeccEEEeCCC
Confidence            4678999999999999999999999999998 599999999999999999999999999999999999999999999984

>PRK14143 heat shock protein GrpE; Provisional

Probab=99.96  E-value=9.6e-30  Score=190.89  Aligned_cols=79  Identities=29%  Similarity=0.468  Sum_probs=76.4

Q ss_pred             hccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          19 TIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        19 ~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      ..+.+|++||+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|+++
T Consensus       145 ~~l~~Gve~i~k~l~~~L~k~GV~~i~~~G~~FDP~~HEAv~~~~~~~~~~gtVv~v~qkGY~l~~RVLRpA~V~Vsk~  223 (238)
T PRK14143        145 QALHRSYQGLYKQLVDVLKRLGVSPMRVVGQEFDPNLHEAVLREPSDEHPEDVVLEELQRGYHLGGRVLRHAMVKVSMG  223 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCeeeCCCCCCCChHHhheeeeecCCCCCcCeEEEEeeCCceeCCEecccceEEECCC
Confidence            5678999999999999999999999999999999999999999999999999999999999999999999999999974

>PRK14154 heat shock protein GrpE; Provisional

Probab=99.96  E-value=1.5e-29  Score=186.77  Aligned_cols=78  Identities=32%  Similarity=0.462  Sum_probs=75.4

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCC-CCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEee
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINP-LGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGIS   95 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~-~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~   95 (97)
                      .+++.+|++||+++|.++|+++||++|++ +|++|||++||||+++++++.++|||++|+|+||+++|||||||+|+|+
T Consensus       129 ~~~l~eGvemi~k~l~~vL~k~GVe~I~~~~G~~FDP~~HEAv~~~~~~~~~~gtVveV~qkGY~l~dRVLRPA~V~Va  207 (208)
T PRK14154        129 VKSMRDGMSLTLDLLHNTLAKHGVQVINPNPGDPFDPALHEAMSVQAVPDAKPDTIIQVLQKGYQLNGRVLRAARVIVA  207 (208)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCCCChhHhheeeeeCCCCCCcCEEEEEeeCCcEeCCEEecceEEEeC
Confidence            47789999999999999999999999999 6999999999999999999999999999999999999999999999997

>PRK14160 heat shock protein GrpE; Provisional

Probab=99.96  E-value=1.6e-29  Score=186.89  Aligned_cols=78  Identities=28%  Similarity=0.369  Sum_probs=74.7

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+.+.+|++||+++|.++|+++||++|++.| +|||++|+||+++++++.++|+|++|+|+||+++|||||||+|+|++
T Consensus       134 ~~~l~~Gv~mi~kql~~vL~k~GVe~I~~~G-~FDP~~HEAv~~~~~~e~~~gtVveV~qkGY~l~dRVLRpA~V~Va~  211 (211)
T PRK14160        134 VEDLKKGIEMTVKQFKTSLEKLGVEEISTEG-EFDPNLHNAVMHVEDENYGENEIVEVFQKGYKRGDKVIRYSMVKVAN  211 (211)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCEEeCCCC-CCChHHhceeeeeCCCCCCcCeEEEEeeCCcEeCCEeeecceEEeCC
Confidence            3568999999999999999999999999999 89999999999999999999999999999999999999999999985

>PF01025 GrpE: GrpE; InterPro: IPR000740 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.96  E-value=5.1e-29  Score=175.07  Aligned_cols=79  Identities=37%  Similarity=0.522  Sum_probs=69.5

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+.+.+|++|+.++|.++|+++||++|++.|++|||++|+|++++++++.++|+|++|+++||+++|||||||+|+|+|
T Consensus        87 ~~~~~~g~~~~~~~l~~~L~~~Gv~~i~~~G~~FDp~~heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~K  165 (165)
T PF01025_consen   87 EESLLEGLEMILKQLEDILEKNGVEEIEPVGEPFDPNLHEAVETVPDPDKEPGTIVEVVRPGYRLGGRVLRPAEVVVSK  165 (165)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTTEEEE--TSSB--TTTEEEEEEECSSSS-CTBEEEECC-EEEETTEEEE-EEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEecCCCCCCCCHHHheeheecCcCCCCcCeEEEEEecCEEECCEEeeeeEEEecC
Confidence            4577999999999999999999999999999999999999999999999999999999999999999999999999997

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolysing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. In prokaryotes the grpE protein. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. The X-ray crystal structure of GrpE in complex with the ATPase domain of DnaK revealed that GrpE is an asymmetric homodimer, bent in a manner that favours extensive contacts with only one DnaKATPase monomer []. GrpE does not actively compete for the atomic positions occupied by the nucleotide. GrpE and ADP mutually reduce one another's affinity for DnaK 200-fold, and ATP instantly dissociates GrpE from DnaK.; GO: 0000774 adenyl-nucleotide exchange factor activity, 0042803 protein homodimerization activity, 0051087 chaperone binding, 0006457 protein folding; PDB: 3A6M_A 4ANI_A 1DKG_B.

>PRK14157 heat shock protein GrpE; Provisional

Probab=99.95  E-value=1e-28  Score=184.17  Aligned_cols=77  Identities=30%  Similarity=0.434  Sum_probs=74.1

Q ss_pred             cHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          21 DYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        21 ~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      +.+|+++|+++|.++|+++||++|++.|++|||++||||+++++++.++|+|++|+|+||+++|||||||+|+|++.
T Consensus       149 ~~~~~~~i~k~l~~vL~k~GVe~I~~~Ge~FDP~~HEAV~~~~~~~~~~gtVi~V~QkGY~l~dRVLRPA~V~Vak~  225 (227)
T PRK14157        149 MDDSFKAVAAKIDKAFEKFGVEKFGEKGEDFDPTKHDAILHKPDPDAEKETVDTVVEAGYRIGDRVIRAARVVVASP  225 (227)
T ss_pred             cchHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCcCEEEEEeeCCceeCCEeccCceEEeCCC
Confidence            46799999999999999999999999999999999999999999999999999999999999999999999999973

>cd00446 GrpE GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases

Probab=99.95  E-value=2.8e-28  Score=168.49  Aligned_cols=78  Identities=41%  Similarity=0.570  Sum_probs=74.9

Q ss_pred             hhhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEe
Q psy2068          17 QLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGI   94 (97)
Q Consensus        17 ~~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V   94 (97)
                      ..+.+.+|++|+.++|.++|+++||++|++.|++|||++|||++++++++.++|+|++|+|+||+++|||||||+|+|
T Consensus        60 ~~~~~~~g~~~i~~~l~~~L~~~Gv~~i~~~g~~FDp~~Heav~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V  137 (137)
T cd00446          60 ELKNLVEGVEMTLKQLLDVLEKHGVEKIEPEGEPFDPNLHEAVMQVPSPDVEPGTVVEVLQKGYKLGDRVLRPAMVVV  137 (137)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHheeeeeecCCCCCcCEEEEEeecCeEECCEEecccEeEC
Confidence            446789999999999999999999999999999999999999999999989999999999999999999999999987

The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent.

>PRK14156 heat shock protein GrpE; Provisional

Probab=99.94  E-value=1.9e-27  Score=171.92  Aligned_cols=76  Identities=25%  Similarity=0.326  Sum_probs=70.9

Q ss_pred             hccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecC-CCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          19 TIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVE-GKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        19 ~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~-~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      ..+.+|++||+++|.++|+++||++|++.  +|||++|||+++++++ +.++|+|++|+|+||+++|||||||+|+|++
T Consensus       101 ~~l~~Gv~mi~k~l~~~L~~~GV~~i~~~--~FDP~~HEAv~~~~~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Va~  177 (177)
T PRK14156        101 DDVKKGLEMVQESLIQALKEEGVEEVAVD--SFDHNLHMAVQTLPADDEHPADSIAQVFQKGYKLHERLLRPAMVVVYN  177 (177)
T ss_pred             hhHHHHHHHHHHHHHHHHHHCCCeecCCC--CCChhHhhcceeecCCCCCCcCEEEEEeeCCcEeCCEEeecceeEeCC
Confidence            35689999999999999999999999985  9999999999999864 5799999999999999999999999999985

>PRK14142 heat shock protein GrpE; Provisional

Probab=99.94  E-value=3.7e-27  Score=175.36  Aligned_cols=75  Identities=29%  Similarity=0.430  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCC-CCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          23 SFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKE-ANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        23 ~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~-~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++||+++|.++|+++||++|+++|++|||++||||+++++++.+ .++|++|+|+||+++|||||||+|+|+|+
T Consensus       108 ~~v~~I~kqL~~iLek~GVe~I~~~Ge~FDP~~HEAv~~ve~~e~~~~~tVveV~QkGYkL~dRVLRPA~V~Vsk~  183 (223)
T PRK14142        108 GPLKSVADKLDSALTGLGLVAFGAEGEDFDPVLHEAVQHEGDGGQGSKPVIGTVMRQGYQLGEQVLRHALVGVVDT  183 (223)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhhhceeeeecCCCCCCCCEEEEEecCCcEeCCEeccCceEEECCC
Confidence            4689999999999999999999999999999999999999988754 67999999999999999999999999984

>PRK14164 heat shock protein GrpE; Provisional

Probab=99.93  E-value=1.4e-26  Score=172.00  Aligned_cols=73  Identities=27%  Similarity=0.393  Sum_probs=68.4

Q ss_pred             HH-HHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          23 SF-VCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        23 ~G-~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      +| +++++++|.++|+++||++|+++|++|||++||||+++++++  .++|++|+|+||++||||||||+|+|++.
T Consensus       144 ~g~l~~i~~~l~~vL~k~Gve~I~~~Ge~FDP~~HEAV~~~~~~~--~~~V~~V~qkGY~l~dRVLRPA~V~Vak~  217 (218)
T PRK14164        144 EGPLKAFSDKLTNVLAGLKVEKFGEEGDAFDPEIHEAVQDLSSGD--EKVLGTVLRKGYRMGDRVLRTAMVIIADP  217 (218)
T ss_pred             ccHHHHHHHHHHHHHHHCCCEEeCCCCCCCChhHhheeeeecCCC--CCEeeEEeeCCcEECCEeccCceEEeCCC
Confidence            45 899999999999999999999999999999999999998764  68999999999999999999999999973

>KOG3003|consensus

Probab=99.93  E-value=2.6e-26  Score=171.39  Aligned_cols=82  Identities=46%  Similarity=0.732  Sum_probs=77.8

Q ss_pred             HhhhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEee
Q psy2068          16 AQLTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGIS   95 (97)
Q Consensus        16 ~~~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~   95 (97)
                      .+++-.++|+.|++.+|.++|.++|++..+|+|++|||+.|||+.++|+...++|||..|.+.||++|||+||||+|.|+
T Consensus       151 ~~L~~l~eGl~mte~ql~~vf~KhGLekldPigekFDPn~HEAvfq~p~~~k~pgtV~~v~k~Gy~L~~R~IRPA~VgV~  230 (236)
T KOG3003|consen  151 KDLKDLFEGLSMTEAQLKEVFAKHGLEKLDPIGEKFDPNEHEAVFQVPDAAKEPGTVALVTKKGYKLNGRVIRPAMVGVV  230 (236)
T ss_pred             hHHHHHHhHHHHHHHHHHHHHHHcCceecCCCCCCCCcchhheeEeccccCCCCCeEEEEeccCcccCCeeechhheeee
Confidence            45566699999999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             cC
Q psy2068          96 KS   97 (97)
Q Consensus        96 k~   97 (97)
                      ++
T Consensus       231 ~~  232 (236)
T KOG3003|consen  231 KG  232 (236)
T ss_pred             cC
Confidence            75

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	97
4ani_A	213	Structural Basis For The Intermolecular Communicati		6e-12

>pdb|4ANI|A Chain A, Structural Basis For The Intermolecular Communication Between Dnak And Grpe In The Dnak Chaperone System From Geobacillus Kaustophilus Hta426 Length = 213

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
           +  K+ G+E I  +G+ FDP  H+A+ + E EG E NTVV   + GYKL +RV+RPA+V 
Sbjct: 151 DALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPAMVK 210
Query: 94  ISK 96
           +S+
Sbjct: 211 VSQ 213

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	97
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	1e-30
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	6e-29
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	2e-24

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1 Length = 197

 Score =  106 bits (266), Expect = 1e-30
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 28  MKWKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           +  K   +V ++ G+E I       DPN H+A+   E +      V+ + + GY L  R 
Sbjct: 125 LTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRT 184

Query: 87  IRPALVGISK 96
           IR A+V ++K
Sbjct: 185 IRAAMVTVAK 194

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus} Length = 213

 Score =  102 bits (255), Expect = 6e-29
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 28  MKWKQ-ANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRV 86
           M ++   +  K+ G+E I  +G+ FDP  H+A+ + E EG E NTVV   + GYKL +RV
Sbjct: 144 MVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRV 203

Query: 87  IRPALVGISK 96
           +RPA+V +S+
Sbjct: 204 LRPAMVKVSQ 213

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus} Length = 177

 Score = 89.3 bits (222), Expect = 2e-24
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 34  NVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVG 93
            +    G+E +   GE FDP +HEA+        E   V  V + G+++   ++RPA V 
Sbjct: 109 RILAGLGVEEVPGEGEAFDPRYHEAVGLLP---GEPGKVAKVFQRGFRMGEALVRPARVA 165

Query: 94  ISK 96
           + +
Sbjct: 166 VGE 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	97
1dkg_A	197	Nucleotide exchange factor GRPE; HSP70, GRPE, nucl	99.97
3a6m_A	177	Protein GRPE, HSP-70 cofactor; coiled-coil, four-h	99.96
4ani_A	213	Protein GRPE; chaperone cycle, complementary assay	99.96

>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1

Probab=99.97  E-value=3.4e-31  Score=192.81  Aligned_cols=80  Identities=25%  Similarity=0.360  Sum_probs=77.1

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|||++|+|+||+++|||||||+|+|+++
T Consensus       116 ~~~l~~Gv~~~~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~~tVv~v~qkGY~l~dRvLRpA~V~V~~~  195 (197)
T 1dkg_A          116 MSAMVEDIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA  195 (197)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTTTEEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhheeeeecCCCCCcCeEEEEeeCCeeeCCEEecceEEEecCC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999974

>3a6m_A Protein GRPE, HSP-70 cofactor; coiled-coil, four-helix bundle, dimer, chaperone, STRE response; 3.23A {Thermus thermophilus}

Probab=99.96  E-value=3.9e-30  Score=184.74  Aligned_cols=77  Identities=25%  Similarity=0.312  Sum_probs=73.4

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++   ++|||++|+|+||+++|||||||+|+|+++
T Consensus        93 ~~~l~~Gv~m~~~~l~~~L~k~Gv~~i~~~Ge~FDP~~HeAv~~~~~---~~gtVv~v~qkGY~l~dRvLRpA~V~V~~~  169 (177)
T 3a6m_A           93 PESIRQGVRAIRDGFFRILAGLGVEEVPGEGEAFDPRYHEAVGLLPG---EPGKVAKVFQRGFRMGEALVRPARVAVGEE  169 (177)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCEECCCTTSBCCTTTEEEEEEEES---STTBEEEEEECCEEETTEEEECEEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHhhhhhcccC---CcCeEEEEeecCeeeCCEEecCeEEEEeCC
Confidence            45689999999999999999999999999999999999999999987   789999999999999999999999999974

>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}

Probab=99.96  E-value=1.4e-30  Score=191.76  Aligned_cols=79  Identities=37%  Similarity=0.571  Sum_probs=76.2

Q ss_pred             hhccHHHHHHHHHHHHHHHHhCCCeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeec
Q psy2068          18 LTIDYSFVCRMKWKQANVFKRHGLEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK   96 (97)
Q Consensus        18 ~~~~~~G~~~i~~~l~~~L~~~Gv~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k   96 (97)
                      .+++.+|++||+++|.++|+++||++|+++|++|||++||||+++++++.++|||++|+|+||+++|||||||+|+|++
T Consensus       135 ~~~l~eGvemi~k~l~~~L~k~Gv~~I~~~Ge~FDP~~HeAv~~v~~~~~~~gtVv~V~qkGY~l~dRVLRpA~V~Va~  213 (213)
T 4ani_A          135 AKSILQGMEMVYRSLVDALKKEGVEAIEAVGKPFDPYLHQAVMQAEAEGYEPNTVVEELQKGYKLKDRVLRPAMVKVSQ  213 (213)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTEECCCCSSSCCCTTTEEEEEEECCSSSCSSSEEEEEECCCEETTSCCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCEEeCCCCCCCCHHHceeeeeecCCCCCCCcEEEEEeCCeEECCEEeeceEEEeCC
Confidence            4568999999999999999999999999999999999999999999989999999999999999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	97
d1dkga1	59	b.73.1.1 (A:139-197) Head domain of nucleotide exc	9e-25

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]} Length = 59

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

 Score = 86.2 bits (214), Expect = 9e-25
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 41 LEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISK 96
          +E I       DPN H+A+   E +      V+ + + GY L  R IR A+V ++K
Sbjct: 1  VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAK 56

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	97
d1dkga1	59	Head domain of nucleotide exchange factor GrpE {Es	99.94

>d1dkga1 b.73.1.1 (A:139-197) Head domain of nucleotide exchange factor GrpE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Head domain of nucleotide exchange factor GrpE
superfamily: Head domain of nucleotide exchange factor GrpE
family: Head domain of nucleotide exchange factor GrpE
domain: Head domain of nucleotide exchange factor GrpE
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=2.8e-27  Score=142.18  Aligned_cols=57  Identities=32%  Similarity=0.491  Sum_probs=54.9

Q ss_pred             CeeeCCCCCCCCcccceeeeEeecCCCCCCeeEEEEecCeeeCCEEeeeceEEeecC
Q psy2068          41 LEPINPLGEKFDPNFHEALFEQEVEGKEANTVVVVSKIGYKLYNRVIRPALVGISKS   97 (97)
Q Consensus        41 v~~i~~~G~~FDP~~HeAv~~~~~~~~~~gtV~~V~~~GY~~~~rvLRpA~V~V~k~   97 (97)
                      |+.|+++|++|||++|||++++++++.++|+|++|+|+||+++|||||||+|+|+|+
T Consensus         1 ve~i~~~g~~FDP~~HeAv~~~~~~~~~~~~I~~v~~~GY~~~~rvlRpA~V~V~k~   57 (59)
T d1dkga1           1 VEVIAETNVPLDPNVHQAIAMVESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKA   57 (59)
T ss_dssp             EEEECCCSSBCCTTSEEEEEEEECSSSCTTBEEEEEECEEEETTEEEECEEEEEEEC
T ss_pred             CceeCCCCCCCCHHHceEeeEecCCCCCCCEEEEEEeCCcEECCEEeeccEEEEecC
Confidence            578999999999999999999999999999999999999999999999999999984