Psyllid ID: psy2121

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60------
Protein Sequence
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Secondary Structure (PSIPRED)
cccccEEEEEEEcHHHHHHHHHHHHcccccHHHHccccccccEEEEEcHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHEEEEEEccHHHHHHHHHHHccccccccHHHHHHHcccEEEEEEHHHHcccEHHHHHHHHHc
Coil and Loop (DISEMBL)
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTvsafqmhpctimicdedaTQELRVKTVKYFKRL
Flexible Loop (DISEMBL)
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Low Complexity Region (SEG)
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Disordered region (IsUnstruct)
****LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF***
Disordered Region (DISOPRED)
**RELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Disordered Region (DISEMBL)
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Disordered Region (DISPRO)
*SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	66	2.2.26 [Sep-21-2011]
Q16HW7	278	Glucosamine-6-phosphate i	N/A	N/A	0.909	0.215	0.9	5e-26
Q8TDQ7	276	Glucosamine-6-phosphate i	yes	N/A	0.909	0.217	0.883	7e-26
Q17QL1	276	Glucosamine-6-phosphate i	yes	N/A	0.909	0.217	0.883	8e-26
Q6PA43	275	Glucosamine-6-phosphate i	N/A	N/A	0.909	0.218	0.883	1e-25
A4IHW6	275	Glucosamine-6-phosphate i	no	N/A	0.909	0.218	0.883	1e-25
Q5TNH5	273	Glucosamine-6-phosphate i	yes	N/A	0.924	0.223	0.873	2e-25
Q9CRC9	276	Glucosamine-6-phosphate i	yes	N/A	0.909	0.217	0.866	2e-25
Q29NT9	274	Glucosamine-6-phosphate i	yes	N/A	0.878	0.211	0.896	5e-25
A4FV08	289	Glucosamine-6-phosphate i	no	N/A	0.909	0.207	0.85	5e-25
O88958	289	Glucosamine-6-phosphate i	no	N/A	0.909	0.207	0.85	6e-25

>sp|Q16HW7|GNPI_AEDAE Glucosamine-6-phosphate isomerase OS=Aedes aegypti GN=Gnpda1 PE=3 SV=1

 Score =  115 bits (289), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/60 (90%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVKYFKAL 258

Aedes aegypti (taxid: 7159)
EC: 3EC: .EC: 5EC: .EC: 9EC: 9EC: .EC: 6

>sp|Q8TDQ7|GNPI2_HUMAN Glucosamine-6-phosphate isomerase 2 OS=Homo sapiens GN=GNPDA2 PE=1 SV=1

 Score =  115 bits (288), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q17QL1|GNPI2_BOVIN Glucosamine-6-phosphate isomerase 2 OS=Bos taurus GN=GNPDA2 PE=2 SV=1

 Score =  115 bits (288), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q6PA43|GNPI2_XENLA Glucosamine-6-phosphate isomerase 2 OS=Xenopus laevis GN=gnpda2 PE=2 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|A4IHW6|GNPI2_XENTR Glucosamine-6-phosphate isomerase 2 OS=Xenopus tropicalis GN=gnpda2 PE=2 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q5TNH5|GNPI_ANOGA Glucosamine-6-phosphate isomerase OS=Anopheles gambiae GN=Gnpda1 PE=3 SV=3

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 2/63 (3%)

Query: 2   SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 61
           +RE+M+MIL  GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVK
Sbjct: 196 AREVMIMIL--GSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVK 253

Query: 62  YFK 64
           YFK
Sbjct: 254 YFK 256

Anopheles gambiae (taxid: 7165)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q9CRC9|GNPI2_MOUSE Glucosamine-6-phosphate isomerase 2 OS=Mus musculus GN=Gnpda2 PE=2 SV=1

 Score =  114 bits (284), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKA+EEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAMEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|Q29NT9|GNPI_DROPS Glucosamine-6-phosphate isomerase OS=Drosophila pseudoobscura pseudoobscura GN=Gnpda1 PE=3 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/58 (89%), Positives = 54/58 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H  T+MICDEDAT ELRVKTVKYFK
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFK 256

Drosophila pseudoobscura pseudoobscura (taxid: 46245)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|A4FV08|GNPI1_BOVIN Glucosamine-6-phosphate isomerase 1 OS=Bos taurus GN=GNPDA1 PE=2 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/60 (85%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258

Seems to trigger calcium oscillations in mammalian eggs. These oscillations serve as the essential trigger for egg activation and early development of the embryo.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

>sp|O88958|GNPI1_MOUSE Glucosamine-6-phosphate isomerase 1 OS=Mus musculus GN=Gnpda1 PE=2 SV=3

 Score =  112 bits (280), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/60 (85%), Positives = 55/60 (91%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258

Seems to trigger calcium oscillations in mammalian eggs. These oscillations serve as the essential trigger for egg activation and early development of the embryo.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	66
444728646	332	Glucosamine-6-phosphate isomerase 1 [Tup	0.939	0.186	0.854	3e-25
270005557	257	hypothetical protein TcasGA2_TC007627 [T	0.969	0.249	0.859	4e-25
91079050	274	PREDICTED: similar to GA19983-PA [Tribol	0.909	0.218	0.883	6e-25
351696458	287	Glucosamine-6-phosphate isomerase 1 [Het	0.909	0.209	0.866	7e-25
62955707	269	glucosamine-6-phosphate isomerase 1 [Dan	0.878	0.215	0.913	7e-25
395817359	289	PREDICTED: glucosamine-6-phosphate isome	0.909	0.207	0.866	7e-25
340715426	281	PREDICTED: glucosamine-6-phosphate isome	0.909	0.213	0.9	7e-25
348583154	287	PREDICTED: glucosamine-6-phosphate isome	0.909	0.209	0.866	7e-25
307176989	273	Glucosamine-6-phosphate isomerase [Campo	0.909	0.219	0.9	9e-25
395817363	255	PREDICTED: glucosamine-6-phosphate isome	0.909	0.235	0.866	9e-25

>gi|444728646|gb|ELW69095.1| Glucosamine-6-phosphate isomerase 1 [Tupaia chinensis]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/62 (85%), Positives = 58/62 (93%)

Query: 5   LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
           L+VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ +CDEDAT EL+VKTVKYFK
Sbjct: 240 LLVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVFVCDEDATLELKVKTVKYFK 299

Query: 65  RL 66
            L
Sbjct: 300 GL 301

Source: Tupaia chinensis

Species: Tupaia chinensis

Genus: Tupaia

Family: Tupaiidae

Order: Scandentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|270005557|gb|EFA02005.1| hypothetical protein TcasGA2_TC007627 [Tribolium castaneum]

 Score =  118 bits (296), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/64 (85%), Positives = 58/64 (90%)

Query: 3   RELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKY 62
           + L VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+MICDEDAT ELRVKTVKY
Sbjct: 184 QALTVMILITGTHKAFALYKAIEEGVNHMWTVSAFQQHPHTLMICDEDATLELRVKTVKY 243

Query: 63  FKRL 66
           FK L
Sbjct: 244 FKSL 247

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91079050|ref|XP_975109.1| PREDICTED: similar to GA19983-PA [Tribolium castaneum] gi|270003660|gb|EFA00108.1| hypothetical protein TcasGA2_TC002924 [Tribolium castaneum]

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/60 (88%), Positives = 57/60 (95%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITGSHKAFALYKAIE+GVNHMWTVSAFQ+HP T+M+CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGSHKAFALYKAIEDGVNHMWTVSAFQLHPNTLMVCDEDATMELRVKTVKYFKGL 258

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|351696458|gb|EHA99376.1| Glucosamine-6-phosphate isomerase 1 [Heterocephalus glaber]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVFVCDEDATLELKVKTVKYFKGL 258

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|62955707|ref|NP_001017867.1| glucosamine-6-phosphate isomerase 1 [Danio rerio] gi|62202396|gb|AAH92982.1| Glucosamine-6-phosphate deaminase 1 [Danio rerio]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
           VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDATQELRVKTVKYFK
Sbjct: 199 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPQTVFVCDEDATQELRVKTVKYFK 256

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395817359|ref|XP_003782139.1| PREDICTED: glucosamine-6-phosphate isomerase 1 isoform 1 [Otolemur garnettii] gi|395817361|ref|XP_003782140.1| PREDICTED: glucosamine-6-phosphate isomerase 1 isoform 2 [Otolemur garnettii]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVFVCDEDATLELKVKTVKYFKGL 258

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340715426|ref|XP_003396214.1| PREDICTED: glucosamine-6-phosphate isomerase-like [Bombus terrestris] gi|350414669|ref|XP_003490383.1| PREDICTED: glucosamine-6-phosphate isomerase-like [Bombus impatiens]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/60 (90%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITGSHKAFALYKAIEEG+NHMWTVSAFQ HP TI+ICDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGSHKAFALYKAIEEGINHMWTVSAFQQHPRTIIICDEDATLELRVKTVKYFKAL 258

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|348583154|ref|XP_003477338.1| PREDICTED: glucosamine-6-phosphate isomerase 1-like [Cavia porcellus]

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVFVCDEDATLELKVKTVKYFKGL 258

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|307176989|gb|EFN66295.1| Glucosamine-6-phosphate isomerase [Camponotus floridanus]

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/60 (90%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ HP T++ICDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPRTLIICDEDATLELRVKTVKYFKSL 258

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|395817363|ref|XP_003782141.1| PREDICTED: glucosamine-6-phosphate isomerase 1 isoform 3 [Otolemur garnettii]

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/60 (86%), Positives = 56/60 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HPCT+ +CDEDAT EL+VKTVKYFK L
Sbjct: 165 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPCTVFVCDEDATLELKVKTVKYFKGL 224

Source: Otolemur garnettii

Species: Otolemur garnettii

Genus: Otolemur

Family: Galagidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	66
ZFIN|ZDB-GENE-050417-417	275	gnpda1 "glucosamine-6-phosphat	0.878	0.210	0.913	7.6e-25
UNIPROTKB|Q5TNH5	273	Gnpda1 "Glucosamine-6-phosphat	0.924	0.223	0.873	2e-24
UNIPROTKB|Q16HW7	278	Gnpda1 "Glucosamine-6-phosphat	0.909	0.215	0.9	3.3e-24
ZFIN|ZDB-GENE-091117-41	277	gnpda2 "glucosamine-6-phosphat	0.909	0.216	0.9	3.3e-24
UNIPROTKB|E1C878	275	GNPDA2 "Glucosamine-6-phosphat	0.909	0.218	0.883	4.2e-24
UNIPROTKB|Q17QL1	276	GNPDA2 "Glucosamine-6-phosphat	0.909	0.217	0.883	4.2e-24
UNIPROTKB|E2RH59	276	GNPDA2 "Uncharacterized protei	0.909	0.217	0.883	4.2e-24
UNIPROTKB|B4DJF3	206	GNPDA2 "cDNA FLJ60594, highly	0.909	0.291	0.883	4.2e-24
UNIPROTKB|Q2VYF1	242	GNPDA2 "Glucosamine-6-phosphat	0.909	0.247	0.883	4.2e-24
UNIPROTKB|Q8TDQ7	276	GNPDA2 "Glucosamine-6-phosphat	0.909	0.217	0.883	4.2e-24

ZFIN|ZDB-GENE-050417-417 gnpda1 "glucosamine-6-phosphate deaminase 1" [Danio rerio (taxid:7955)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
             VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDATQELRVKTVKYFK
Sbjct:   199 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQQHPQTVFVCDEDATQELRVKTVKYFK 256

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5TNH5 Gnpda1 "Glucosamine-6-phosphate isomerase" [Anopheles gambiae (taxid:7165)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 55/63 (87%), Positives = 58/63 (92%)

Query:     2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 61
             +RE+M+MIL  GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVK
Sbjct:   196 AREVMIMIL--GSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVK 253

Query:    62 YFK 64
             YFK
Sbjct:   254 YFK 256

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006043 "glucosamine catabolic process" evidence=ISS

GO:0006091 "generation of precursor metabolites and energy" evidence=ISS

UNIPROTKB|Q16HW7 Gnpda1 "Glucosamine-6-phosphate isomerase" [Aedes aegypti (taxid:7159)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 54/60 (90%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVKYFKAL 258

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006043 "glucosamine catabolic process" evidence=ISS

GO:0006091 "generation of precursor metabolites and energy" evidence=ISS

ZFIN|ZDB-GENE-091117-41 gnpda2 "glucosamine-6-phosphate deaminase 2" [Danio rerio (taxid:7955)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 54/60 (90%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI ICDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFICDEDATLELRVKTVKYFKGL 258

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

UNIPROTKB|E1C878 GNPDA2 "Glucosamine-6-phosphate deaminase 2 isoform 1" [Gallus gallus (taxid:9031)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q17QL1 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Bos taurus (taxid:9913)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

GO:0005737 "cytoplasm" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|E2RH59 GNPDA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

UNIPROTKB|B4DJF3 GNPDA2 "cDNA FLJ60594, highly similar to Homo sapiens glucosamine-6-phosphate deaminase 2 (GNPDA2), mRNA" [Homo sapiens (taxid:9606)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   129 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 188

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q2VYF1 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Homo sapiens (taxid:9606)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   165 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 224

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

UNIPROTKB|Q8TDQ7 GNPDA2 "Glucosamine-6-phosphate isomerase 2" [Homo sapiens (taxid:9606)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 53/60 (88%), Positives = 55/60 (91%)

Query:     7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
             VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct:   199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258

GO:0006044 "N-acetylglucosamine metabolic process" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0004342 "glucosamine-6-phosphate deaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B6EN78	NAGB_ALISL	3, ., 5, ., 9, 9, ., 6	0.65	0.9090	0.2255	yes	N/A
B2TU53	NAGB_SHIB3	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
C6DBY4	NAGB_PECCP	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
Q65QE8	NAGB_MANSM	3, ., 5, ., 9, 9, ., 6	0.6333	0.9090	0.2247	yes	N/A
Q0TK13	NAGB_ECOL5	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q9CRC9	GNPI2_MOUSE	3, ., 5, ., 9, 9, ., 6	0.8666	0.9090	0.2173	yes	N/A
A5F125	NAGB_VIBC3	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
A3N353	NAGB_ACTP2	3, ., 5, ., 9, 9, ., 6	0.65	0.9090	0.2247	yes	N/A
Q29NT9	GNPI_DROPS	3, ., 5, ., 9, 9, ., 6	0.8965	0.8787	0.2116	yes	N/A
C3LWT7	NAGB_VIBCM	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
Q87K60	NAGB_VIBPA	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
B0BSS6	NAGB_ACTPJ	3, ., 5, ., 9, 9, ., 6	0.65	0.9090	0.2247	yes	N/A
A7N5W3	NAGB_VIBHB	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
Q8D4T9	NAGB_VIBVU	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
Q324M6	NAGB_SHIBS	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q3Z4C2	NAGB_SHISS	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q7VKN1	NAGB_HAEDU	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2247	yes	N/A
Q17QL1	GNPI2_BOVIN	3, ., 5, ., 9, 9, ., 6	0.8833	0.9090	0.2173	yes	N/A
B7N9S4	NAGB_ECOLU	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B1LLC0	NAGB_ECOSM	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B6HYN6	NAGB_ECOSE	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q1REP9	NAGB_ECOUT	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B7LKT5	NAGB_ESCF3	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B1IY50	NAGB_ECOLC	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
A1A8T7	NAGB_ECOK1	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B1X6L1	NAGB_ECODH	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q9KKS5	NAGB_VIBCH	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
B7M5J6	NAGB_ECO8A	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q54XK9	GNPI_DICDI	3, ., 5, ., 9, 9, ., 6	0.6333	0.9090	0.2247	yes	N/A
C4ZWF4	NAGB_ECOBW	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
B3GZ06	NAGB_ACTP7	3, ., 5, ., 9, 9, ., 6	0.65	0.9090	0.2247	yes	N/A
Q9XVJ2	GNPI_CAEEL	3, ., 5, ., 9, 9, ., 6	0.7333	0.9090	0.2247	yes	N/A
Q5E294	NAGB_VIBF1	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
Q5TNH5	GNPI_ANOGA	3, ., 5, ., 9, 9, ., 6	0.8730	0.9242	0.2234	yes	N/A
Q7MGE1	NAGB_VIBVY	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
A7ZXT7	NAGB_ECOHS	3, ., 5, ., 9, 9, ., 6	0.6	0.9090	0.2255	yes	N/A
Q8TDQ7	GNPI2_HUMAN	3, ., 5, ., 9, 9, ., 6	0.8833	0.9090	0.2173	yes	N/A
Q9VMP9	GNPI_DROME	3, ., 5, ., 9, 9, ., 6	0.8965	0.8787	0.2124	yes	N/A
B5FBU7	NAGB_VIBFM	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A
C5BGA6	NAGB_EDWI9	3, ., 5, ., 9, 9, ., 6	0.5833	0.9090	0.2255	yes	N/A
B7VTI0	NAGB_VIBSL	3, ., 5, ., 9, 9, ., 6	0.6166	0.9090	0.2255	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	66
PRK00443	261	PRK00443, nagB, glucosamine-6-phosphate deaminase;	3e-24
TIGR00502	259	TIGR00502, nagB, glucosamine-6-phosphate isomerase	3e-23
PTZ00285	253	PTZ00285, PTZ00285, glucosamine-6-phosphate isomer	1e-22
cd01399	232	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Gluco	6e-18
COG0363	238	COG0363, NagB, 6-phosphogluconolactonase/Glucosami	4e-12
cd00458	169	cd00458, SugarP_isomerase, SugarP_isomerase: Sugar	1e-08
PRK02122	652	PRK02122, PRK02122, glucosamine-6-phosphate deamin	0.001
PRK12358	239	PRK12358, PRK12358, putative 6-phosphogluconolacto	0.002

>gnl|CDD|179028 PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional

 Score = 90.3 bits (225), Expect = 3e-24
 Identities = 30/60 (50%), Positives = 39/60 (65%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           +M+L  G +KA A+  A+E  VNHMW  S  Q+HP   ++ DE A  EL+VKTVKYF  L
Sbjct: 199 IMLLAPGHNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLDEAAASELKVKTVKYFTEL 258

Length = 261

>gnl|CDD|129593 TIGR00502, nagB, glucosamine-6-phosphate isomerase

 Score = 87.6 bits (217), Expect = 3e-23
 Identities = 38/60 (63%), Positives = 49/60 (81%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           V+IL++G  KA AL KA+E GVNHMWT+SA Q+H   I++CDE+ATQEL+VKTV+YF  L
Sbjct: 199 VLILVSGHQKALALQKAVEGGVNHMWTISALQLHKHAIVVCDENATQELKVKTVEYFNEL 258

The set of proteins recognized by This model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set [Central intermediary metabolism, Amino sugars]. Length = 259

>gnl|CDD|140308 PTZ00285, PTZ00285, glucosamine-6-phosphate isomerase; Provisional

 Score = 86.0 bits (213), Expect = 1e-22
 Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 2   SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 61
           +RE  V++L TG+ KA A+ + +E GV HM   SA QMHP  ++  DEDAT EL+VKT K
Sbjct: 196 ARE--VLLLATGASKAIAVARCVEGGVTHMCPASALQMHPAAVLCLDEDATLELKVKTTK 253

Length = 253

>gnl|CDD|238693 cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium

 Score = 73.3 bits (181), Expect = 6e-18
 Identities = 20/49 (40%), Positives = 27/49 (55%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           +++L TG  KA A+ KA+E  V      S  Q+HP   +I DE A  EL
Sbjct: 184 ILLLATGEGKAEAVKKALEGPVTEECPASILQLHPNVTVILDEAAASEL 232

The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P. Length = 232

>gnl|CDD|223440 COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]

 Score = 58.0 bits (141), Expect = 4e-12
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 6   MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV 57
            V++L+TG  KA AL +A+E  V  ++  S  Q+HP      DE+A   L+V
Sbjct: 187 EVLLLVTGEEKADALKQALEGPVTELYPASILQLHPNVTWFLDEEAASLLKV 238

Length = 238

>gnl|CDD|238258 cd00458, SugarP_isomerase, SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL)

 Score = 48.1 bits (114), Expect = 1e-08
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 3   RELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC 47
           R   V++L+ G  K   L +  E GV      +  +     I+I 
Sbjct: 125 RAGTVIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGKEKDIVIV 169

RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway. Length = 169

>gnl|CDD|235005 PRK02122, PRK02122, glucosamine-6-phosphate deaminase-like protein; Validated

 Score = 34.2 bits (79), Expect = 0.001
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL-RVKT 59
           +++L  G HKA  + +A+E  ++     S  Q HP    + D  A  EL R+KT
Sbjct: 226 IVLLAWGEHKAPIIKRAVEGEISDEVPASYLQEHPNATFVLDLAAASELTRIKT 279

Length = 652

>gnl|CDD|183470 PRK12358, PRK12358, putative 6-phosphogluconolactonase; Provisional

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           +++++ G  KA  L K ++  V      S  Q+HP   +I DE A  EL
Sbjct: 189 LLLIVNGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAAEL 237

Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	66
TIGR00502	259	nagB glucosamine-6-phosphate isomerase. The set of	99.6
PRK00443	261	nagB glucosamine-6-phosphate deaminase; Provisiona	99.57
PTZ00285	253	glucosamine-6-phosphate isomerase; Provisional	99.56
PRK12358	239	putative 6-phosphogluconolactonase; Provisional	99.51
TIGR01198	233	pgl 6-phosphogluconolactonase. This enzyme of the	99.48
COG0363	238	NagB 6-phosphogluconolactonase/Glucosamine-6-phosp	99.47
PLN02360	268	probable 6-phosphogluconolactonase	99.4
PRK02122	652	glucosamine-6-phosphate deaminase-like protein; Va	99.33
cd01399	232	GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-p	99.3
PRK09762	232	galactosamine-6-phosphate isomerase; Provisional	99.23
KOG3148|consensus	273		99.23
cd00458	169	SugarP_isomerase SugarP_isomerase: Sugar Phosphate	99.15
KOG3147|consensus	252		98.98
cd01400	219	6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfam	98.87
PF01182	199	Glucosamine_iso: Glucosamine-6-phosphate isomerase	96.72
PF04198	255	Sugar-bind: Putative sugar-binding domain; InterPr	88.9
PRK15418	318	transcriptional regulator LsrR; Provisional	86.41
COG2390	321	DeoR Transcriptional regulator, contains sigma fac	83.64

>TIGR00502 nagB glucosamine-6-phosphate isomerase

Probab=99.60  E-value=1.7e-15  Score=101.97  Aligned_cols=62  Identities=61%  Similarity=1.016  Sum_probs=57.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhhC
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL   66 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~~   66 (66)
                      ++|+++++|++|+++++++++++.+..+|+++++.|++++||+|++|++.+..++.+|++++
T Consensus       197 ~~vi~~~~G~~Ka~al~~al~~~~~~~~Pas~l~~~~~~~~~~d~~Aa~~l~~~~~~~~~~~  258 (259)
T TIGR00502       197 KEVLILVSGHQKALALQKAVEGGVNHMWTISALQLHKHAIVVCDENATQELKVKTVEYFNEL  258 (259)
T ss_pred             CEEEEEEcCHHHHHHHHHHHcCCCCCccchHHhccCCCEEEEEcHHHHhhhhHHHHHHhhcc
Confidence            45999999999999999999998877899999999999999999999999999999999864

The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.

>PRK00443 nagB glucosamine-6-phosphate deaminase; Provisional

Probab=99.57  E-value=4.5e-15  Score=98.94  Aligned_cols=62  Identities=48%  Similarity=0.750  Sum_probs=57.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhhC
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL   66 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~~   66 (66)
                      ++++++++|++|+++++.++.|+.++.+|+++++.|++++||+|++|++.|+.++..||.++
T Consensus       197 ~~vi~~a~G~~K~~ai~~al~~~~~~~~Pa~~l~~~~~~~~~~d~~aa~~l~~~~~~~~~~~  258 (261)
T PRK00443        197 KEIMLLAPGHNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLDEAAASELKVKTVKYFTEL  258 (261)
T ss_pred             CeEEEEecChHHHHHHHHHHhCCCCCCcchHHHhhCCCEEEEEcHHHHhHHHHHHHHHhhhc
Confidence            34999999999999999999998878899999999999999999999999999999999764

>PTZ00285 glucosamine-6-phosphate isomerase; Provisional

Probab=99.56  E-value=4.4e-15  Score=99.76  Aligned_cols=56  Identities=50%  Similarity=0.732  Sum_probs=51.4

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTV   60 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~   60 (66)
                      ++|+|+++|++|+++|+++++++.+..+|+++++.|++++||+|++|++.|..+|.
T Consensus       197 ~~i~l~~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~~~~~  252 (253)
T PTZ00285        197 REVLLLATGASKAIAVARCVEGGVTHMCPASALQMHPAAVLCLDEDATLELKVKTT  252 (253)
T ss_pred             CEEEEEecCHHHHHHHHHHhcCCCCCccchHHhccCCCEEEEEcHHHHhhhhhccc
Confidence            34999999999999999999987777899999999999999999999999987764

>PRK12358 putative 6-phosphogluconolactonase; Provisional

Probab=99.51  E-value=2.3e-14  Score=95.69  Aligned_cols=51  Identities=31%  Similarity=0.423  Sum_probs=47.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++|+|+++|++|+++|++++++++++++|+|+++.|++++||+|++|++.|
T Consensus       187 ~~i~ll~~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~aa~~l  237 (239)
T PRK12358        187 KNLLLIVNGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAAEL  237 (239)
T ss_pred             CEEEEEEeCHHHHHHHHHHHcCCCCCCcCcHHhccCCCEEEEECHHHHhhc
Confidence            459999999999999999999988889999999999999999999999876

>TIGR01198 pgl 6-phosphogluconolactonase

Probab=99.48  E-value=5e-14  Score=93.89  Aligned_cols=51  Identities=25%  Similarity=0.247  Sum_probs=46.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHh-cCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIE-EGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~-~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++|+|+++|++|+++++++++ ++.+..+|++.++.|++++||+|++|++.|
T Consensus       182 ~~i~~lv~G~~Ka~~~~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l  233 (233)
T TIGR01198       182 RKVFLLIAGEEKRNALAEALAVEAEPYPLPAAGVLHSGKTLWLLDYAAARKL  233 (233)
T ss_pred             CeEEEEEEChHHHHHHHHHHhcCCCcccCCHhHcCCCCcEEEEEChHhhhcC
Confidence            459999999999999999998 566668999999999999999999998754

This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with

>COG0363 NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]

Probab=99.47  E-value=5.9e-14  Score=94.50  Aligned_cols=52  Identities=37%  Similarity=0.533  Sum_probs=48.8

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      ++|+|+|+|++|+++++++++|+++..||++.++.|++++||+|++|++.|.
T Consensus       186 k~v~llv~G~~Ka~al~~~l~~~~~~~~Pas~l~~~~~~~~~~d~~A~~~l~  237 (238)
T COG0363         186 KEVLLLVTGEEKADALKQALEGPVTELYPASILQLHPNVTWFLDEEAASLLK  237 (238)
T ss_pred             CeEEEEEcCchHHHHHHHHhcCCCcccccHHHHhcCCCeEEEEchHHhhhcc
Confidence            4599999999999999999999998889999999999999999999999774

>PLN02360 probable 6-phosphogluconolactonase

Probab=99.40  E-value=4e-13  Score=91.12  Aligned_cols=53  Identities=23%  Similarity=0.132  Sum_probs=46.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHh----cCCccccccceeeecC-cEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIE----EGVNHMWTVSAFQMHP-CTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~----~~~~~~~Pas~l~~h~-~~~~~lD~~Aa~~l~~   57 (66)
                      ++|+|+++|++|+++|++++.    ++.+..+|++.++.|+ +++||+|++|++.|.+
T Consensus       206 ~~i~llv~G~~Ka~al~~~l~~~~~~~~~~~~Pas~l~~~~~~~~w~~D~~Aa~~l~~  263 (268)
T PLN02360        206 SNVAVVATGESKANAVHLAIDDVTEGPDAPSLPARMVQPTKGKLVWFLDKPAASKLDG  263 (268)
T ss_pred             CeEEEEEeCccHHHHHHHHHhhccCCCCcccCChhhhcCCCCcEEEEECHHHHhhCcc
Confidence            459999999999999999995    5555689999999985 9999999999998864

>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated

Probab=99.33  E-value=1.6e-12  Score=97.37  Aligned_cols=53  Identities=28%  Similarity=0.353  Sum_probs=49.7

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~   57 (66)
                      ++|+|+++|++|+++|+++++|+++..+|||+++.|++++||+|++||+.|++
T Consensus       224 r~Iilla~G~~Ka~iv~~~l~g~~~~~~PAs~Lq~h~~~~~~lD~~AA~~Ltr  276 (652)
T PRK02122        224 RRIVLLAWGEHKAPIIKRAVEGEISDEVPASYLQEHPNATFVLDLAAASELTR  276 (652)
T ss_pred             CeEEEEEeCHHHHHHHHHHHhCCCCCccchHHhccCCCEEEEEcHHHhhhccc
Confidence            34999999999999999999998888899999999999999999999999875

>cd01399 GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium

Probab=99.30  E-value=3.7e-12  Score=83.17  Aligned_cols=51  Identities=39%  Similarity=0.482  Sum_probs=47.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++++++|++|+++++.++.++.+..+|++.++.|++++||+|++|++.|
T Consensus       182 ~~vi~~a~G~~K~~ai~~al~~~~~~~~P~~~l~~~~~~~~~~d~~aa~~~  232 (232)
T cd01399         182 KEILLLATGEGKAEAVKKALEGPVTEECPASILQLHPNVTVILDEAAASEL  232 (232)
T ss_pred             CEEEEEeCChHHHHHHHHHHhCCCCCCcchHHHhhCCCeEEEEcHHHhccC
Confidence            359999999999999999999988778999999999999999999998754

The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.

>PRK09762 galactosamine-6-phosphate isomerase; Provisional

Probab=99.23  E-value=7.8e-12  Score=83.38  Aligned_cols=45  Identities=24%  Similarity=0.259  Sum_probs=42.1

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   49 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~   49 (66)
                      ++|+|+++|++|+++++++++++++..+|+|+++.|+|+++++|+
T Consensus       188 ~~i~llv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~d~  232 (232)
T PRK09762        188 REVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLIDR  232 (232)
T ss_pred             CEEEEEEeCHHHHHHHHHHHcCCCCCcccHHHHhhCCCEEEEecC
Confidence            449999999999999999999988788999999999999999995

>KOG3148|consensus

Probab=99.23  E-value=3.4e-12  Score=85.37  Aligned_cols=63  Identities=86%  Similarity=1.269  Sum_probs=59.7

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhhC
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL   66 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~~   66 (66)
                      ||+  |+++++|+.||-++.+.++..++.+|..|..|+|+++++++|++|.-+|..+|++||+.+
T Consensus       196 are--vmilitgahkafalykaieegvnhmwtvsafqqh~~t~ficdedatlelkvktvkyfkgl  258 (273)
T KOG3148|consen  196 ARE--VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTTFICDEDATLELKVKTVKYFKGL  258 (273)
T ss_pred             cce--EEEEEeccHHHHHHHHHHHhcccceeehhhHhhCCceEEEecCCceeEEEeeehHHHHHH
Confidence            577  999999999999999999999999999999999999999999999999999999999863

>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL)

Probab=99.15  E-value=4.2e-11  Score=76.43  Aligned_cols=43  Identities=23%  Similarity=0.230  Sum_probs=39.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEE
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMIC   47 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~l   47 (66)
                      ++++|+++|++|+++|+++++|+.+.++|++.++.|++++||+
T Consensus       127 ~~i~~~~~G~~Ka~~l~~~~~~~~~~~~Pas~l~~~~~~~~~~  169 (169)
T cd00458         127 GTVIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGKEKDIVIV  169 (169)
T ss_pred             cEEEEEecChhHHHHHHHHhcCCCCCcCCHHHhccCCCeEEeC
Confidence            3499999999999999999998877789999999999999985

RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.

>KOG3147|consensus

Probab=98.98  E-value=7.6e-10  Score=75.36  Aligned_cols=52  Identities=19%  Similarity=0.215  Sum_probs=45.5

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeee-cCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQM-HPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~-h~~~~~~lD~~Aa~~l~~   57 (66)
                      ++|+|+|+|+.||++++.+++... ..+|++++++ .++++||+|++|++.++.
T Consensus       198 ~~v~fvv~G~~Ka~iv~~i~~~~~-~~lPaa~V~~~~~~l~WflD~~A~~~l~~  250 (252)
T KOG3147|consen  198 KNVAFVVCGASKAEIVKAILEDKE-KKLPAALVNPAKGKLVWFLDDDAASKLPV  250 (252)
T ss_pred             hceEEEEeCcchhHhHHHHHhccc-ccCCchheeccCCeEEEEEchHHhcCCCC
Confidence            349999999999999999998654 4699999996 578999999999998863

>cd01400 6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate

Probab=98.87  E-value=2.6e-09  Score=70.53  Aligned_cols=43  Identities=21%  Similarity=0.152  Sum_probs=38.7

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeec-CcEEEEE
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMH-PCTIMIC   47 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h-~~~~~~l   47 (66)
                      ++|+|+++|++|+++++++++++++.++|+++++.| .+++||.
T Consensus       176 ~~i~ll~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~w~~  219 (219)
T cd01400         176 RRVVFLVTGAEKAEALKRALAGPDPEELPAARVLPRPGEVLWFL  219 (219)
T ss_pred             CeEEEEEeChhHHHHHHHHHcCCCCCCCChhhhcCCCCcEEEeC
Confidence            459999999999999999999987778999999998 6788974

6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.

>PF01182 Glucosamine_iso: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; InterPro: IPR006148 This domain is characteristic of the enzymes 6-phosphogluconolactonase (3

Probab=96.72  E-value=0.0017  Score=42.27  Aligned_cols=21  Identities=33%  Similarity=0.480  Sum_probs=18.5

Q ss_pred             cEEEEEEcChhHHHHHHHHHh
Q psy2121           5 LMVMILITGSHKAFALYKAIE   25 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~   25 (66)
                      ++|+|+++|++|+++|+++++
T Consensus       179 ~~i~~l~~G~~Ka~~v~~~l~  199 (199)
T PF01182_consen  179 RKIVLLATGEEKAEAVKRALQ  199 (199)
T ss_dssp             SEEEEEEESGGGHHHHHHHH-
T ss_pred             CEEEEEEeCHHHHHHHHHHhC
Confidence            459999999999999999884

1.1.31 from EC), Glucosamine-6-phosphate isomerase (3.5.99.6 from EC), and Galactosamine-6-phosphate isomerase. 6-Phosphogluconolactonase is the enzyme responsible for the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate, the second step in the pentose phosphate pathway. Glucosamine-6-phosphate isomerase (or Glucosamine 6-phosphate deaminase) is the enzyme responsible for the conversion of D-glucosamine 6-phosphate into D-fructose 6-phosphate []. It is the last specific step in the pathway for N-acetylglucosamine (GlcNAC) utilization in bacteria such as Escherichia coli (gene nagB) or in fungi such as Candida albicans (gene NAG1).; GO: 0005975 carbohydrate metabolic process; PDB: 3CSS_A 3CH7_A 1Y89_B 3TX2_A 2BKX_B 2BKV_B 3E15_B 1HOR_B 1JT9_A 1HOT_A ....

>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC

Probab=88.90  E-value=1.4  Score=29.74  Aligned_cols=38  Identities=29%  Similarity=0.419  Sum_probs=29.4

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      .+++.++.|..|++++..++.+..-             .++++|++.|..+
T Consensus       216 ~~~I~va~G~~K~~aI~aALr~g~i-------------~~LItDe~tA~~l  253 (255)
T PF04198_consen  216 PRVIAVAGGEEKAEAILAALRGGYI-------------NVLITDESTARAL  253 (255)
T ss_dssp             SEEEEEE-SGGGHHHHHHHHHTTST-------------SEEEEEHHHHHHH
T ss_pred             CcEEEEcCchhhHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence            4599999999999999999987531             2367898888765

One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....

>PRK15418 transcriptional regulator LsrR; Provisional

Probab=86.41  E-value=1.7  Score=30.35  Aligned_cols=38  Identities=24%  Similarity=0.345  Sum_probs=30.5

Q ss_pred             EEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           6 MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         6 ~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      +++.++.|.+|++++..++.|..-             ..+++|++.|..+.
T Consensus       277 ~~I~vA~G~~K~~Ai~aALrgg~i-------------~~LITDe~tA~~lL  314 (318)
T PRK15418        277 TVIGVAGGEEKAEAIIAALKGGYI-------------NALVTDEKTARAIL  314 (318)
T ss_pred             CEEEEecCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHHH
Confidence            489999999999999999987531             23678999887764

>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]

Probab=83.64  E-value=2.4  Score=30.02  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=30.6

Q ss_pred             EEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           6 MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         6 ~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      +++.++.|+.|++++..+|.|..             ...+++|+..|..+-
T Consensus       280 ~vI~vAgG~~K~~AI~aaL~gg~-------------~n~LITDe~tA~~lL  317 (321)
T COG2390         280 KVIAVAGGESKAEAILAALRGGY-------------INVLITDEATAEALL  317 (321)
T ss_pred             cEEEEeCCcccHHHHHHHHhCCC-------------CCEEEeCHHHHHHHH
Confidence            49999999999999999998753             134778998887664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	66
1ne7_A	289	Human Glucosamine-6-Phosphate Deaminase Isomerase A		7e-26
1jt9_A	266	Structure Of The Mutant F174a T Form Of The Glucosa		3e-17
1hor_A	266	Structure And Catalytic Mechanism Of Glucosamine 6-		3e-17
3hn6_A	289	Crystal Structure Of Glucosamine-6-phosphate Deamin		2e-14

>pdb|1NE7|A Chain A, Human Glucosamine-6-Phosphate Deaminase Isomerase At 1.75 A Resolution Complexed With N-Acetyl-Glucosamine-6-Phosphate And 2-Deoxy-2-Amino-Glucitol-6-Phosphate Length = 289

Iteration: 1
 Score =  112 bits (279), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258

>pdb|1JT9|A Chain A, Structure Of The Mutant F174a T Form Of The Glucosamine-6-Phosphate Deaminase From E.Coli Length = 266

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF  L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258

>pdb|1HOR|A Chain A, Structure And Catalytic Mechanism Of Glucosamine 6-phosphate Deaminase From Escherichia Coli At 2.1 Angstroms Resolution Length = 266

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF  L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258

>pdb|3HN6|A Chain A, Crystal Structure Of Glucosamine-6-phosphate Deaminase From Borrelia Burgdorferi Length = 289

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYF 63
           V+I++ G +KA AL  AIE+GVNHMWT+SA Q+H   I++ D++AT EL+V TV+YF
Sbjct: 220 VLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYF 276

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	66
1fs5_A	266	Glucosamine-6-phosphate deaminase; allosteric enzy	3e-27
3hn6_A	289	Glucosamine-6-phosphate deaminase; niaid, ssgcid,	5e-27
1ne7_A	289	Glucosamine-6-phosphate isomerase; V-type like all	3e-26
2ri0_A	234	Glucosamine-6-phosphate deaminase; carbohydrate me	2e-20
2bkx_A	242	Glucosamine-6-phosphate deaminase; hydrolase, subs	8e-19
3oc6_A	248	6-phosphogluconolactonase; ssgcid, structural geno	3e-09
3tx2_A	251	Probable 6-phosphogluconolactonase; ssgcid, hydrol	5e-08
3ico_A	268	6PGL, 6-phosphogluconolactonase; ssgcid, infectiou	2e-07
3eb9_A	266	6-phosphogluconolactonase; catalytic mechanism, pe	3e-06
3e15_A	312	Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluc	7e-06
3css_A	267	6-phosphogluconolactonase; structural genomics, me	1e-04
1y89_A	238	DEVB protein; structural genomics, protein structu	3e-04

>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A Length = 266

 Score = 97.8 bits (244), Expect = 3e-27
 Identities = 36/60 (60%), Positives = 45/60 (75%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF  L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258

>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi} Length = 289

 Score = 97.5 bits (243), Expect = 5e-27
 Identities = 32/60 (53%), Positives = 46/60 (76%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           V+I++ G +KA AL  AIE+GVNHMWT+SA Q+H   I++ D++AT EL+V TV+YF  +
Sbjct: 220 VLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFNDI 279

>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1 Length = 289

 Score = 95.6 bits (238), Expect = 3e-26
 Identities = 50/58 (86%), Positives = 54/58 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A* Length = 234

 Score = 79.2 bits (196), Expect = 2e-20
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           ++++  G  KA A+   ++  V      S  Q HP  I+I DE A   +
Sbjct: 186 ILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI 234

>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A* Length = 242

 Score = 75.1 bits (185), Expect = 8e-19
 Identities = 13/45 (28%), Positives = 26/45 (57%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDA 51
           +++LI+G  KA A+ K +E  ++  +  SA  +H    ++ D +A
Sbjct: 193 ILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREA 237

>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis} Length = 248

 Score = 49.2 bits (118), Expect = 3e-09
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           V ++++G  KA A+  A+          +       T+ + DE A  +L
Sbjct: 200 VWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL 248

>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus} Length = 251

 Score = 46.1 bits (110), Expect = 5e-08
 Identities = 11/49 (22%), Positives = 22/49 (44%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           V ++++G  KA A+  A+          +  +    T+ + DE A  +L
Sbjct: 202 VWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL 250

>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis} Length = 268

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 55
           V +L++G  KA A+  AI          +       T+ + D DA  +L
Sbjct: 218 VWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKL 266

>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A* Length = 266

 Score = 41.3 bits (97), Expect = 3e-06
 Identities = 7/50 (14%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQ-MHPCTIMICDEDATQEL 55
           V++L TG+ K + +   + +  +        +        + D++  + L
Sbjct: 214 VIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENL 263

>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax} Length = 312

 Score = 40.3 bits (94), Expect = 7e-06
 Identities = 3/50 (6%), Positives = 12/50 (24%), Gaps = 4/50 (8%)

Query: 7   VMILITGSHKAFALYKAIEEGVN----HMWTVSAFQMHPCTIMICDEDAT 52
            + L+  + K       + +        ++          T ++      
Sbjct: 247 KIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYTN 296

>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A Length = 267

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAF--QMHPCTIMICDEDATQEL 55
           V++L  G  K + +   + E       VS F         ++ D  A + +
Sbjct: 215 VVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGV 265

>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str} Length = 238

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHM-WTVSAFQ-MHPCTIMICDEDATQEL 55
           +  L+ G+ KA  + +        + +  +        T    D DA  ++
Sbjct: 187 ISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	66
3hn6_A	289	Glucosamine-6-phosphate deaminase; niaid, ssgcid,	99.76
3ico_A	268	6PGL, 6-phosphogluconolactonase; ssgcid, infectiou	99.63
1ne7_A	289	Glucosamine-6-phosphate isomerase; V-type like all	99.63
1fs5_A	266	Glucosamine-6-phosphate deaminase; allosteric enzy	99.62
3eb9_A	266	6-phosphogluconolactonase; catalytic mechanism, pe	99.62
3tx2_A	251	Probable 6-phosphogluconolactonase; ssgcid, hydrol	99.62
3oc6_A	248	6-phosphogluconolactonase; ssgcid, structural geno	99.61
2bkx_A	242	Glucosamine-6-phosphate deaminase; hydrolase, subs	99.55
3css_A	267	6-phosphogluconolactonase; structural genomics, me	99.55
1y89_A	238	DEVB protein; structural genomics, protein structu	99.55
2ri0_A	234	Glucosamine-6-phosphate deaminase; carbohydrate me	99.53
3e15_A	312	Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluc	99.21
1vl1_A	232	6PGL, 6-phosphogluconolactonase; TM1154, structura	99.21
3lwd_A	226	6-phosphogluconolactonase; structural genomics, JO	98.95
3nwp_A	233	6-phosphogluconolactonase; structural genomics, jo	98.91
3lhi_A	232	Putative 6-phosphogluconolactonase; structural gen	98.88
2r5f_A	264	Transcriptional regulator, putative; transcription	97.68
2okg_A	255	Central glycolytic gene regulator; alpha/beta/alph	97.67
2gnp_A	266	Transcriptional regulator; structural genomics, MC	97.65
2w48_A	315	Sorbitol operon regulator; SORC, activator, repres	97.65
2o0m_A	345	Transcriptional regulator, SORC family; structural	97.61
3nze_A	267	Putative transcriptional regulator, sugar-binding;	95.75
3kv1_A	267	Transcriptional repressor; alpha-beta structure, s	95.32
3efb_A	266	Probable SOR-operon regulator; alpha-beta-alpha sa	94.61

>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}

Probab=99.76  E-value=4.8e-19  Score=120.38  Aligned_cols=62  Identities=55%  Similarity=0.893  Sum_probs=58.8

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhh
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKR   65 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~   65 (66)
                      ||+  |+|+++|++|+++|+++++|++++++|+|.++.|++++||+|++||+.|+.++++||++
T Consensus       217 Ar~--i~lla~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~~~~~~y~~~  278 (289)
T 3hn6_A          217 SQE--VLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFND  278 (289)
T ss_dssp             SSC--EEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEESGGGTTSBHHHHHHHHH
T ss_pred             cCe--EEEEEcChHHHHHHHHHHhCCCCcccChHHHccCCCEEEEEcHHHHccccHhHHHHHHH
Confidence            455  99999999999999999999988899999999999999999999999999999999986

>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}

Probab=99.63  E-value=3.5e-16  Score=105.25  Aligned_cols=52  Identities=25%  Similarity=0.188  Sum_probs=49.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      ++|+|+++|++|+++|+++++|++++++|+|+++.|++++||+|++||+.|+
T Consensus       216 r~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~  267 (268)
T 3ico_A          216 REVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLP  267 (268)
T ss_dssp             SEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEEHHHHTTCC
T ss_pred             ceEEEEecCCCchHHHHHHhcCCCCccccccccccccceEEEecchhhhhCC
Confidence            3499999999999999999999988899999999999999999999999875

>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1

Probab=99.63  E-value=5.4e-16  Score=104.50  Aligned_cols=62  Identities=84%  Similarity=1.283  Sum_probs=57.4

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhh
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKR   65 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~   65 (66)
                      +|+  ++|+++|++|+++|+++++|+.++.+|+|+++.|++++||+|++||+.|...+++||++
T Consensus       196 a~~--vi~la~G~~Ka~ai~~al~g~~~~~~Pas~l~~h~~~~li~D~~aA~~L~~~~~~~~~~  257 (289)
T 1ne7_A          196 ARE--VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKG  257 (289)
T ss_dssp             SSC--EEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHHHH
T ss_pred             CCE--EEEEEcCHHHHHHHHHHHhCCCCccCchHHHccCCCEEEEEcHHHHhhcccchhhhhHH
Confidence            455  99999999999999999999887889999999999999999999999998878899875

>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A

Probab=99.62  E-value=4.7e-16  Score=103.07  Aligned_cols=62  Identities=58%  Similarity=0.981  Sum_probs=57.2

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhh
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKR   65 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~   65 (66)
                      +|.  |+++++|++|+++|+++++|+.++.+|+|+++.|++++||+|++||+.|..++.+||++
T Consensus       196 a~~--vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~li~D~~aA~~L~~~~~~~~~~  257 (266)
T 1fs5_A          196 AEE--VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNE  257 (266)
T ss_dssp             SSC--EEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEEECSGGGTTSBHHHHHHHHH
T ss_pred             CCE--EEEEecChHHHHHHHHHhcCCCCCcCChHHHccCCCEEEEEeHHHhhhcccchHHHhhh
Confidence            455  99999999999999999999887789999999999999999999999998888899874

>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*

Probab=99.62  E-value=4.3e-16  Score=104.47  Aligned_cols=53  Identities=13%  Similarity=0.197  Sum_probs=46.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeee-cCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQM-HPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~-h~~~~~~lD~~Aa~~l~~   57 (66)
                      ++|+|+++|++|+++|+++++|++++.+|||++|. |++++||+|++||+.|++
T Consensus       212 ~~i~ll~~G~~Ka~av~~~l~g~~~~~~pAs~l~~~h~~~~~~~D~~Aa~~L~~  265 (266)
T 3eb9_A          212 RNVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENLAK  265 (266)
T ss_dssp             SEEEEEECCGGGHHHHHHHHCSSCSSCCGGGGGGGCSSEEEEEEEHHHHC----
T ss_pred             CeEEEEEeCHHHHHHHHHHHhCCCCccchhHHhcCCCCCEEEEEcHHHhccccc
Confidence            34999999999999999999999888999999999 999999999999998864

>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}

Probab=99.62  E-value=3.6e-16  Score=104.11  Aligned_cols=51  Identities=22%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++|+|+++|++|+++|+++++|++++++|+|+++.|++++||+|++||+.|
T Consensus       200 r~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L  250 (251)
T 3tx2_A          200 REVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL  250 (251)
T ss_dssp             SEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred             CeEEEEEeCHHHHHHHHHHHhCCCCCCCChHHhccCCCEEEEEeHHHHhhc
Confidence            349999999999999999999988889999999999999999999999876

>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}

Probab=99.61  E-value=4.2e-16  Score=103.67  Aligned_cols=51  Identities=22%  Similarity=0.170  Sum_probs=47.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++|+|+++|++|+++|+++++|++++++|+|+++.|++++||+|++||+.|
T Consensus       198 r~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L  248 (248)
T 3oc6_A          198 REVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL  248 (248)
T ss_dssp             EEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred             CeEEEEEeCHHHHHHHHHHHcCCCCCCCChHHhccCCCEEEEEchHHhhCC
Confidence            459999999999999999999988889999999999999999999999865

>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*

Probab=99.55  E-value=3.5e-15  Score=97.36  Aligned_cols=51  Identities=25%  Similarity=0.406  Sum_probs=47.9

Q ss_pred             EEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           6 MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         6 ~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      +++++++|++|+++++++++|++++.+|+|+++.|++++||+|++||+.++
T Consensus       192 ~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~  242 (242)
T 2bkx_A          192 RILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP  242 (242)
T ss_dssp             CEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEETTTTTTCC
T ss_pred             EEEEEEeChHHHHHHHHHHcCCCCCcccHHHhccCCCEEEEEchHHhccCC
Confidence            499999999999999999999887899999999999999999999998763

>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A

Probab=99.55  E-value=3.9e-15  Score=99.56  Aligned_cols=52  Identities=19%  Similarity=0.261  Sum_probs=48.1

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceee-e-cCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQ-M-HPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~-~-h~~~~~~lD~~Aa~~l~   56 (66)
                      ++|+|+++|++|+++|+++++|++++.+|+|+++ . |++++||+|++|++.|.
T Consensus       213 ~~v~~la~G~~Ka~av~~~l~g~~~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l~  266 (267)
T 3css_A          213 KHVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGVC  266 (267)
T ss_dssp             SEEEEEECSGGGHHHHHHHHCSSCCSSCCGGGGGGGCSSEEEEEECTTTTTTTC
T ss_pred             CEEEEEEeCHHHHHHHHHHHcCCCCCcCCHHHhccCCCCCEEEEECHHHHhhcc
Confidence            3499999999999999999999887789999999 8 99999999999998763

>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}

Probab=99.55  E-value=4.8e-15  Score=97.45  Aligned_cols=51  Identities=16%  Similarity=0.117  Sum_probs=47.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcC-Cccccccceeee-cCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEG-VNHMWTVSAFQM-HPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~-~~~~~Pas~l~~-h~~~~~~lD~~Aa~~l   55 (66)
                      ++|+|+++|++|+++|+++++|+ +++.+|+|+++. |++++||+|++||+.|
T Consensus       185 ~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l  237 (238)
T 1y89_A          185 KRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI  237 (238)
T ss_dssp             SEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSSSEEEEEEEHHHHTTT
T ss_pred             CEEEEEEeCHHHHHHHHHHHhCCCCCccCCHHHHhcCCCCEEEEEChHHHhhc
Confidence            34999999999999999999996 677899999999 8999999999999876

>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*

Probab=99.53  E-value=7.9e-15  Score=95.39  Aligned_cols=51  Identities=29%  Similarity=0.407  Sum_probs=47.5

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++++++|++|+++++++++|++++.+|+|+++.|++++||+|++||+.|
T Consensus       184 ~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l  234 (234)
T 2ri0_A          184 KMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI  234 (234)
T ss_dssp             SEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred             CEEEEEEeChHHHHHHHHHHcCCCCCccchHHHhhCCCEEEEEchHHhccC
Confidence            459999999999999999999988889999999999999999999999764

>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}

Probab=99.21  E-value=5.3e-12  Score=86.85  Aligned_cols=48  Identities=8%  Similarity=-0.009  Sum_probs=43.8

Q ss_pred             cEEEEEEcChhHHHHHHHHHh-cCCcc---ccccceeeecCcEEEEEeHHHh
Q psy2121           5 LMVMILITGSHKAFALYKAIE-EGVNH---MWTVSAFQMHPCTIMICDEDAT   52 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~-~~~~~---~~Pas~l~~h~~~~~~lD~~Aa   52 (66)
                      ++|+|+++|++|+++|+++++ |++++   +||||+||.|+++++++|..+.
T Consensus       245 k~v~~lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~~  296 (312)
T 3e15_A          245 SSKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYTN  296 (312)
T ss_dssp             SEEEEEECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHHHTSCEEEEEESCTT
T ss_pred             CeEEEEEcChHHHHHHHHHHHhCCCCCCcCccchHHHhhCCCEEEEEcCCcc
Confidence            349999999999999999999 98877   8999999999999999998753

>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A

Probab=99.21  E-value=1.2e-11  Score=81.47  Aligned_cols=42  Identities=19%  Similarity=0.223  Sum_probs=38.7

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   49 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~   49 (66)
                      ++|+|+++|++|+++|+++++|+   .+|||+++.|++++||+|+
T Consensus       191 ~~iilla~G~~Ka~av~~~l~g~---~~Pas~l~~h~~~~~~~D~  232 (232)
T 1vl1_A          191 LYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK  232 (232)
T ss_dssp             SEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred             CEEEEEEcCHHHHHHHHHHHhCC---CCChHHhCcCCCEEEEeCC
Confidence            44999999999999999999984   3999999999999999995

>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}

Probab=98.95  E-value=4.6e-10  Score=73.74  Aligned_cols=42  Identities=24%  Similarity=0.260  Sum_probs=37.0

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecC-cEEE
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHP-CTIM   45 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~-~~~~   45 (66)
                      ||+  |+|+++|++|+++|+++++|++++++|+|+++.|+ ++.|
T Consensus       182 A~~--i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~v~w  224 (226)
T 3lwd_A          182 AGL--HVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQPIATYW  224 (226)
T ss_dssp             BSC--EEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTSCCEEEE
T ss_pred             hCe--EEEEEECHHHHHHHHHHHcCCCCCcCChHHHhcCCCeEEe
Confidence            455  99999999999999999999888899999999984 4555

>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}

Probab=98.91  E-value=7.9e-10  Score=72.83  Aligned_cols=39  Identities=21%  Similarity=0.268  Sum_probs=35.5

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCc
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC   42 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~   42 (66)
                      ||+  |+|+++|++|+++|+++++|++++++|+|+++.|++
T Consensus       186 A~~--i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~  224 (233)
T 3nwp_A          186 SRQ--IYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRK  224 (233)
T ss_dssp             BSC--EEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSS
T ss_pred             hCe--EEEEEECHHHHHHHHHHHhCCCCCCccHHHHHhCCC
Confidence            455  999999999999999999998888999999999864

>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}

Probab=98.88  E-value=9.1e-10  Score=72.35  Aligned_cols=37  Identities=22%  Similarity=0.225  Sum_probs=33.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCc
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPC   42 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~   42 (66)
                      ++|+|+++|++|+++|+++++| +++++|+|+++.|++
T Consensus       187 ~~i~ll~~G~~Ka~av~~~l~g-~~~~~Pas~l~~h~~  223 (232)
T 3lhi_A          187 GHVFLAIQGEEKKAVFDQAAQG-ENREYPISLVLNHQG  223 (232)
T ss_dssp             SEEEEEEESHHHHHHHHHHHTS-CCTTSTHHHHHTSTT
T ss_pred             CeEEEEEECHHHHHHHHHHHhC-CCccCcHHHHHhCCC
Confidence            3499999999999999999998 667899999999984

>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8

Probab=97.68  E-value=7e-05  Score=49.59  Aligned_cols=38  Identities=26%  Similarity=0.267  Sum_probs=32.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      +++++++.|++|+++++.+++|+..             .++++|+++|..|
T Consensus       225 ~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~L  262 (264)
T 2r5f_A          225 NRVLGLAGGVRKVQAIKGALLGGYL-------------DVLITDVGTARGL  262 (264)
T ss_dssp             SEEEEECCCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHH
T ss_pred             CCEEEEEcCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence            4599999999999999999999742             2789999999876

>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*

Probab=97.67  E-value=6.1e-05  Score=49.66  Aligned_cols=39  Identities=28%  Similarity=0.344  Sum_probs=33.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      ++++++++|++|+++++.+++|+..             .++++|+++|..|.
T Consensus       214 ~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~LL  252 (255)
T 2okg_A          214 PDIIAVAGGSSKAEAIEAYFKKPRN-------------TVLVTDEGAAKKLL  252 (255)
T ss_dssp             SEEEEECCSGGGHHHHHHHTTSCCC-------------EEEEEEHHHHHHHH
T ss_pred             CCEEEEEcCHHHHHHHHHHHhCCCC-------------CEEEECHHHHHHHH
Confidence            4599999999999999999998742             38999999998763

>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8

Probab=97.65  E-value=7.8e-05  Score=49.40  Aligned_cols=40  Identities=10%  Similarity=0.180  Sum_probs=34.1

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~   57 (66)
                      +++++++.|++|+++++.+++|+..             .++++|+++|..|..
T Consensus       222 ~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~Ll~  261 (266)
T 2gnp_A          222 PQSLAVAYGDTKVSSILSVLRANLV-------------NHLITDKNTILKVLE  261 (266)
T ss_dssp             SEEEEECCSGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHHH
T ss_pred             CCEEEEecChhhHHHHHHHHhcCCC-------------CEEEECHHHHHHHHh
Confidence            4599999999999999999999742             278999999988643

>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}

Probab=97.65  E-value=8e-05  Score=50.00  Aligned_cols=38  Identities=11%  Similarity=0.157  Sum_probs=33.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++++++|++|+++++.+++|+..             .++++|+++|..|
T Consensus       276 ~~ii~vA~G~~Ka~Ai~~al~g~~~-------------~~LitDe~aA~~l  313 (315)
T 2w48_A          276 RYSIGIAMGEEKYSGILGALHGRYI-------------NCLVTNRETAELL  313 (315)
T ss_dssp             SEEEEECCCGGGHHHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred             CCEEEEecChHhHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence            4599999999999999999999742             2789999999876

>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8

Probab=97.61  E-value=7.9e-05  Score=50.74  Aligned_cols=39  Identities=28%  Similarity=0.318  Sum_probs=33.9

Q ss_pred             cEEEEEEcChhHHHHHHHHHhc-CCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEE-GVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~-~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      +++++++.|++|+++++.+++| +..             +++++|+++|..|.
T Consensus       301 ~~vi~vA~G~~Ka~Ai~~al~g~~~~-------------~~LitDe~aA~~ll  340 (345)
T 2o0m_A          301 PYVVAIAGGKTKAKAIRAYMKNAPKQ-------------TWLITDEAAANEIL  340 (345)
T ss_dssp             SEEEEECCSGGGHHHHHHHHTTSCTT-------------CEEEEEHHHHHHHT
T ss_pred             CCEEEEEcChHHHHHHHHHHhCCCCC-------------eEEEECHHHHHHHH
Confidence            4599999999999999999998 743             77899999998764

>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0

Probab=95.75  E-value=0.02  Score=37.85  Aligned_cols=39  Identities=26%  Similarity=0.354  Sum_probs=31.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELR   56 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~   56 (66)
                      ++++.++.|..|+++++.+++|+.-             ..+++|+.+|..|.
T Consensus       224 ~~vi~vA~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~lL  262 (267)
T 3nze_A          224 RRRICVVSGASKINGLQGALAAGLA-------------TDLILDEASARRLV  262 (267)
T ss_dssp             SEEEEEECCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHT
T ss_pred             CeEEEEeCChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHH
Confidence            4599999999999999999988531             34778998887764

>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0

Probab=95.32  E-value=0.029  Score=37.06  Aligned_cols=40  Identities=20%  Similarity=0.264  Sum_probs=32.3

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~   57 (66)
                      ++++.++.|..|+++++.+++|..-             ..+++|+.+|..|..
T Consensus       222 ~~~i~va~G~~K~~ai~~al~~~~~-------------~~LITDe~tA~~lL~  261 (267)
T 3kv1_A          222 PNVVAMASESRKALSIMGALRTGVI-------------DVLATSVSCAMALLN  261 (267)
T ss_dssp             SEEEEECCCGGGHHHHHHHHHTSCC-------------SEEEEEHHHHHHHHH
T ss_pred             CcEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHHHh
Confidence            4599999999999999999987531             347789999887743

>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8

Probab=94.61  E-value=0.021  Score=37.60  Aligned_cols=38  Identities=8%  Similarity=0.075  Sum_probs=30.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++.++.|+.|+++++.+++|+.-             ..+++|+.+|..|
T Consensus       227 ~~~i~va~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~~l  264 (266)
T 3efb_A          227 RYSIGIAMSEEKYSGIIGALRGKYI-------------NCLVTNSSTAELL  264 (266)
T ss_dssp             SEEEEECCCSCSSCHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred             CCEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHH
Confidence            4599999999999999999988531             2367899888765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	66
d1fsfa_	266	c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/i	6e-20
d1ne7a_	281	c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/i	7e-20

>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Escherichia coli [TaxId: 562]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Escherichia coli [TaxId: 562]

 Score = 77.5 bits (190), Expect = 6e-20
 Identities = 36/60 (60%), Positives = 45/60 (75%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
           VMIL+ GS KA AL  A+E  VNHMWT+S  Q+HP  IM+CDE +T EL+VKT++YF  L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258

>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.5 bits (190), Expect = 7e-20
 Identities = 50/58 (86%), Positives = 54/58 (93%)

Query: 7   VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
           VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFK 256

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	66
d1ne7a_	281	Glucosamine 6-phosphate deaminase/isomerase NagB {	99.79
d1fsfa_	266	Glucosamine 6-phosphate deaminase/isomerase NagB {	99.77
d1vl1a_	218	6-phosphogluconolactonase {Thermotoga maritima [Ta	99.09
d2o0ma1	247	Transcriptional regulator EF1965 {Enterococcus fae	97.71
d2okga1	250	Central glycolytic gene regulator CggR {Bacillus s	96.7
d3efba1	255	Sor-operon regulator SorC {Shigella flexneri [TaxI	96.0
d2gnpa1	262	Transcriptional regulator SP0247 {Streptococcus pn	95.89
d2r5fa1	258	Transcriptional regulator PSPTO2395 {Pseudomonas s	93.77

>d1ne7a_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.9e-20  Score=122.85  Aligned_cols=63  Identities=84%  Similarity=1.283  Sum_probs=59.2

Q ss_pred             CcccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhhC
Q psy2121           2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL   66 (66)
Q Consensus         2 ~r~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~~   66 (66)
                      ||.  |+|+++|++|+++|+++++|++++.+|||+++.|++++||+|++||+.|+.+|.+||+.+
T Consensus       196 Ak~--iill~~G~~Ka~~v~~~l~~~~~~~~PAS~l~~h~~~~~~~D~~AAs~L~~~~~~~~~~~  258 (281)
T d1ne7a_         196 ARE--VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL  258 (281)
T ss_dssp             SSC--EEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHHHHT
T ss_pred             cce--EEEEEeCccHHHHHHHHHcCCCCCccChHHHccCCCEEEEEeHHHHcCCchhHHHHHHHH
Confidence            455  999999999999999999998888999999999999999999999999999999999863

>d1fsfa_ c.124.1.1 (A:) Glucosamine 6-phosphate deaminase/isomerase NagB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.6e-19  Score=118.69  Aligned_cols=60  Identities=58%  Similarity=0.975  Sum_probs=57.6

Q ss_pred             EEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhHhhHHhhhh
Q psy2121           6 MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKR   65 (66)
Q Consensus         6 ~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~~~~~y~~~   65 (66)
                      +|+|+++|++|+++|+++++|++++.||||+++.|++++||+|++||+.|+.++++||+.
T Consensus       198 ~i~ll~~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~AAs~L~~~~~~~~~~  257 (266)
T d1fsfa_         198 EVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNE  257 (266)
T ss_dssp             CEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGSSSEEEEECSGGGTTSCHHHHHHHHH
T ss_pred             eEEEEEcCHHHHHHHHHHHcCCCCCcCchHHhccCCCEEEEEeHHHhcccchhhHHHHHH
Confidence            499999999999999999999988899999999999999999999999999999999975

>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: 6-phosphogluconolactonase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.09  E-value=4.5e-11  Score=76.10  Aligned_cols=43  Identities=19%  Similarity=0.220  Sum_probs=39.1

Q ss_pred             ccEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeH
Q psy2121           4 ELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDE   49 (66)
Q Consensus         4 ~~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~   49 (66)
                      .++|+|+++|++|+++|+++++|+   .+|+++++.|.+++||+|+
T Consensus       176 ak~i~ll~~G~~K~~~l~~~~~~~---~~Pa~~l~~~~~~~~~~Dk  218 (218)
T d1vl1a_         176 SLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK  218 (218)
T ss_dssp             CSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred             cCEEEEEEcCHHHHHHHHHHhcCC---CCChHHhcCCCCEEEEEcC
Confidence            356999999999999999999874   5999999999999999995

>d2o0ma1 c.124.1.8 (A:95-341) Transcriptional regulator EF1965 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator EF1965
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.71  E-value=2.3e-05  Score=49.39  Aligned_cols=39  Identities=28%  Similarity=0.328  Sum_probs=33.0

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++++++|++|+++++.++.|.            +.|+.+++|+++|..|
T Consensus       207 ~~vi~va~G~~Ka~ai~aAL~gg------------~~~~~LitDe~tA~~l  245 (247)
T d2o0ma1         207 PYVVAIAGGKTKAKAIRAYMKNA------------PKQTWLITDEAAANEI  245 (247)
T ss_dssp             SEEEEECCSGGGHHHHHHHHTTS------------CTTCEEEEEHHHHHHH
T ss_pred             CeEEEEecChhHHHHHHHHHhcC------------CCCeEEEeCHHHHHHH
Confidence            35999999999999999988873            4466789999999876

>d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator CggR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Central glycolytic gene regulator CggR
species: Bacillus subtilis [TaxId: 1423]

Probab=96.70  E-value=0.0014  Score=41.30  Aligned_cols=38  Identities=26%  Similarity=0.333  Sum_probs=31.2

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      +++++++.|++|+++++.++.|.             -...+++|+++|..|
T Consensus       211 ~~~i~vA~G~~K~~Ai~aAL~gg-------------~i~~LItDe~tA~~L  248 (250)
T d2okga1         211 PDIIAVAGGSSKAEAIEAYFKKP-------------RNTVLVTDEGAAKKL  248 (250)
T ss_dssp             SEEEEECCSGGGHHHHHHHTTSC-------------CCEEEEEEHHHHHHH
T ss_pred             CcEEEEECCcHhHHHHHHHHhcC-------------CCCEEEECHHHHHHH
Confidence            35999999999999999988873             234568999999876

>d3efba1 c.124.1.8 (A:11-265) Sor-operon regulator SorC {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Sor-operon regulator SorC
species: Shigella flexneri [TaxId: 623]

Probab=96.00  E-value=0.0017  Score=40.73  Aligned_cols=37  Identities=8%  Similarity=0.089  Sum_probs=30.6

Q ss_pred             EEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           6 MVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         6 ~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++++.|..|+++++.++.|.            +- ..+++|+++|..|
T Consensus       217 ~~I~vA~G~~Ka~aI~aaL~gg------------~~-~~LItDe~tA~~L  253 (255)
T d3efba1         217 YSIGIAMSEEKYSGIIGALRGK------------YI-NCLVTNSSTAELL  253 (255)
T ss_dssp             EEEEECCCSCSSCHHHHHHHTT------------SC-SEEEEEHHHHHHH
T ss_pred             cEEEEecCchhHHHHHHHHhcC------------CC-CEEEeCHHHHHHH
Confidence            4999999999999999999874            22 2378999998876

>d2gnpa1 c.124.1.8 (A:56-317) Transcriptional regulator SP0247 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator SP0247
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.89  E-value=0.0087  Score=37.80  Aligned_cols=40  Identities=10%  Similarity=0.161  Sum_probs=32.6

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhhhH
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRV   57 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l~~   57 (66)
                      .+++.++.|++|+++++.++.|..-            + .+++|++.|..|..
T Consensus       219 ~~~I~vA~G~~K~~aI~aAL~gg~i------------~-~LItDe~tA~~lL~  258 (262)
T d2gnpa1         219 PQSLAVAYGDTKVSSILSVLRANLV------------N-HLITDKNTILKVLE  258 (262)
T ss_dssp             SEEEEECCSGGGHHHHHHHHHTTCC------------S-EEEEEHHHHHHHHH
T ss_pred             CCEEEEecCchhHHHHHHHHhcCCC------------C-EEEeCHHHHHHHHh
Confidence            3599999999999999999998631            1 46789999987754

>d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395 {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Transcriptional regulator PSPTO2395
species: Pseudomonas syringae [TaxId: 317]

Probab=93.77  E-value=0.049  Score=34.19  Aligned_cols=38  Identities=26%  Similarity=0.281  Sum_probs=30.4

Q ss_pred             cEEEEEEcChhHHHHHHHHHhcCCccccccceeeecCcEEEEEeHHHhhhh
Q psy2121           5 LMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQEL   55 (66)
Q Consensus         5 ~~v~~lv~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~lD~~Aa~~l   55 (66)
                      ++++.++.|.+|+++++.++.|..             -..+++|++.|..|
T Consensus       220 ~~~I~vA~G~~K~~aI~aAl~gg~-------------i~~LITDe~tA~~L  257 (258)
T d2r5fa1         220 NRVLGLAGGVRKVQAIKGALLGGY-------------LDVLITDVGTARGL  257 (258)
T ss_dssp             SEEEEECCCGGGHHHHHHHHHTTC-------------CSEEEEEHHHHHHH
T ss_pred             CcEEEEecCchhHHHHHHHHhcCC-------------CCEEEECHHHHHhh
Confidence            458999999999999999998753             12367899988765