Psyllid ID: psy2601

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130--
Protein Sequence
MEAATQPSTLSTKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEccccccEEEEEEEcccEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEccccEEEEEEEEEcccccccEEEEEEcccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
meaatqpstlstkdvtqstaapggttedskfAVDEISCIIKEAIEdciggntynsaKVSTYVSQVVETIMANLIkldkpfkyvVNGTVMQKlgaglhtsssclwddntdgsctvrwenktMYCIVSVYALAL
Flexible Loop (DISEMBL)
meaatqpstlstkdvtqstaapggttedskfAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLhtsssclwddnTDGSCTVRWENKTMYCIVSVYALAL
Low Complexity Region (SEG)
MEAATQPSTLSTKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Disordered region (IsUnstruct)
******************************FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL**
Disordered Region (DISOPRED)
******************************FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Disordered Region (DISEMBL)
**************************EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Disordered Region (DISPRO)
*****************************KFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEAATQPSTLSTKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	132	2.2.26 [Sep-21-2011]
Q9Z336	113	Dynein light chain Tctex-	yes	N/A	0.810	0.946	0.607	2e-35
P63172	113	Dynein light chain Tctex-	yes	N/A	0.803	0.938	0.613	3e-35
P63171	113	Dynein light chain Tctex-	yes	N/A	0.803	0.938	0.613	3e-35
P51807	113	Dynein light chain Tctex-	yes	N/A	0.810	0.946	0.579	8e-35
Q94524	111	Dynein light chain Tctex-	yes	N/A	0.803	0.954	0.613	2e-33
Q6XXL8	116	Dynein light chain Tctex-	N/A	N/A	0.772	0.879	0.470	1e-24
Q8SPS9	116	Dynein light chain Tctex-	no	N/A	0.772	0.879	0.460	2e-24
P56387	116	Dynein light chain Tctex-	no	N/A	0.772	0.879	0.450	4e-24
Q5NVF5	116	Dynein light chain Tctex-	no	N/A	0.772	0.879	0.450	7e-24
P51808	116	Dynein light chain Tctex-	no	N/A	0.772	0.879	0.450	7e-24

>sp|Q9Z336|DYLT1_RAT Dynein light chain Tctex-type 1 OS=Rattus norvegicus GN=Dynlt1 PE=1 SV=1

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 65/107 (60%), Positives = 83/107 (77%)

Query: 26  TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
           +E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V 
Sbjct: 7   SEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVT 66

Query: 86  GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 67  CVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. Required for neurite outgrowth. The function in neurogenesis may be regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation.
Rattus norvegicus (taxid: 10116)

>sp|P63172|DYLT1_HUMAN Dynein light chain Tctex-type 1 OS=Homo sapiens GN=DYNLT1 PE=1 SV=1

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V  
Sbjct: 8   EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 68  VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation.

Homo sapiens (taxid: 9606)

>sp|P63171|DYLT1_BOVIN Dynein light chain Tctex-type 1 OS=Bos taurus GN=DYNLT1 PE=1 SV=1

 Score =  147 bits (370), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V  
Sbjct: 8   EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 68  VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation.

Bos taurus (taxid: 9913)

>sp|P51807|DYLT1_MOUSE Dynein light chain Tctex-type 1 OS=Mus musculus GN=Dynlt1 PE=1 SV=1

 Score =  145 bits (365), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 83/107 (77%)

Query: 26  TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
           +E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + V+E  ++ L KL +PFKY+V 
Sbjct: 7   SEETAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVT 66

Query: 86  GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +MQK GAGLH++SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct: 67  CVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLSI 113

Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation.

Mus musculus (taxid: 10090)

>sp|Q94524|DYLT_DROME Dynein light chain Tctex-type OS=Drosophila melanogaster GN=Dlc90F PE=1 SV=1

 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 81/106 (76%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+S+F VD++S  IKEAIE  IGGN Y   KV+ +  QVVE  +  L K  KP+KY+V  
Sbjct: 6   EESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTA 65

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            +MQK GAGLHT+SSC W+++TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 66  MIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Required for spermatid differentiation. Is not required for polarized transport in rhabdomere development and appears to be a non-essential component of the cytoplasmic dynein complex.

Drosophila melanogaster (taxid: 7227)

>sp|Q6XXL8|DYLT3_SHEEP Dynein light chain Tctex-type 3 OS=Ovis aries GN=DYNLT3 PE=3 SV=1

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 71/102 (69%)

Query: 31  FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
           F  DE   I+KE I+  +GG  YN   ++ + + +VE  +A+L+KL K +KY+V   V+Q
Sbjct: 13  FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLAHLVKLGKAYKYIVTCAVVQ 72

Query: 91  KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           +   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73  RSPYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.

Ovis aries (taxid: 9940)

>sp|Q8SPS9|DYLT3_CANFA Dynein light chain Tctex-type 3 OS=Canis familiaris GN=DYNLT3 PE=3 SV=1

 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 70/102 (68%)

Query: 31  FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
           F  DE   I+KE I+  +GG  YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct: 13  FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72

Query: 91  KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           +   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73  RSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.

Canis familiaris (taxid: 9615)

>sp|P56387|DYLT3_MOUSE Dynein light chain Tctex-type 3 OS=Mus musculus GN=Dynlt3 PE=1 SV=1

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 71/102 (69%)

Query: 31  FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
           F  DE   I+KE ++  +GGN YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct: 13  FNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAVVQ 72

Query: 91  KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           +   G HT+SSC WD  +DG+CT+RWEN+TM CIV+V+A+A+
Sbjct: 73  RSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVAI 114

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.

Mus musculus (taxid: 10090)

>sp|Q5NVF5|DYLT3_PONAB Dynein light chain Tctex-type 3 OS=Pongo abelii GN=DYNLT3 PE=3 SV=1

 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 70/102 (68%)

Query: 31  FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
           F  +E   I+KE ++  +GG  YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct: 13  FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72

Query: 91  KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           K   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73  KSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.

Pongo abelii (taxid: 9601)

>sp|P51808|DYLT3_HUMAN Dynein light chain Tctex-type 3 OS=Homo sapiens GN=DYNLT3 PE=1 SV=1

 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 70/102 (68%)

Query: 31  FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
           F  +E   I+KE ++  +GG  YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct: 13  FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72

Query: 91  KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           K   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct: 73  KSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Probably binds BUB3 as part of transport cargo. Required for the efficient progression through mitosis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
242025367	111	dynein light chain Tctex-type, putative	0.803	0.954	0.650	3e-35
357612843	116	dynein molecular motor protein light cha	0.810	0.922	0.644	6e-35
299782485	111	tctex1 domain-containing protein 1 [Naso	0.803	0.954	0.650	2e-34
328783000	112	PREDICTED: dynein light chain Tctex-type	0.803	0.946	0.650	2e-34
380029229	111	PREDICTED: dynein light chain Tctex-type	0.803	0.954	0.650	2e-34
58332706	113	dynein, light chain, Tctex-type 1 [Xenop	0.818	0.955	0.638	3e-34
389612238	116	dynein light chain [Papilio xuthus]	0.810	0.922	0.635	3e-34
350538929	113	putative cytoplasmic dynein light chain	0.818	0.955	0.620	3e-34
351704116	113	Dynein light chain Tctex-type 1 [Heteroc	0.818	0.955	0.611	3e-34
410329731	125	dynein, light chain, Tctex-type 1 [Pan t	0.878	0.928	0.573	4e-34

>gi|242025367|ref|XP_002433096.1| dynein light chain Tctex-type, putative [Pediculus humanus corporis] gi|212518623|gb|EEB20358.1| dynein light chain Tctex-type, putative [Pediculus humanus corporis]

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 85/106 (80%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           ED++F VDE+S IIKE +E  IGGN Y+  KV+ + S VVE+ +  L KL KP+KY+V+ 
Sbjct: 6   EDTQFVVDEVSTIIKEVVESTIGGNAYHQNKVNQWTSTVVESCLNTLAKLQKPYKYIVSC 65

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           T+MQK GA LHT+SSC WD+NTDGSCTVRWENKTMYCIVSVY LA+
Sbjct: 66  TIMQKTGAALHTASSCYWDNNTDGSCTVRWENKTMYCIVSVYGLAI 111

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612843|gb|EHJ68195.1| dynein molecular motor protein light chain 1 [Danaus plexippus]

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 69/107 (64%), Positives = 86/107 (80%)

Query: 26  TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
           TE+++F VD++S IIKEAIE+ IGGN Y   KV+ + S VVE+ +  L KL KP+KY+V 
Sbjct: 10  TEENQFIVDDVSKIIKEAIENSIGGNAYQHNKVNQWTSAVVESCLGQLTKLQKPYKYIVT 69

Query: 86  GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            T+MQK GAGLHT+SSC WD+NTDGSCTVRWENKTMYCIVSV+ L +
Sbjct: 70  CTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGLGI 116

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|299782485|ref|NP_001177692.1| tctex1 domain-containing protein 1 [Nasonia vitripennis]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 86/106 (81%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+++F VD++S IIKEAIE  IGGN Y+  KV+ + S VVE+ + NL KL KP+KY+V  
Sbjct: 6   EETQFVVDDVSKIIKEAIEVSIGGNVYSHGKVNQWTSNVVESCLGNLTKLSKPYKYIVTC 65

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           T+MQK GAGLHT+SSC WD+ TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 66  TIMQKNGAGLHTASSCYWDNATDGSCTVRWENKTMYCIVSVFGLAI 111

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783000|ref|XP_624045.3| PREDICTED: dynein light chain Tctex-type 1 [Apis mellifera]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 85/106 (80%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+++F VD++S IIKEAIE  IGGN Y  +KV+ + S VVE  + NL KL KP+KY+V  
Sbjct: 7   EETQFVVDDVSKIIKEAIEVSIGGNAYQHSKVNQWTSNVVEACLGNLTKLQKPYKYIVTC 66

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           T+MQK GAGLHT+SSC WD+ TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 67  TIMQKNGAGLHTASSCYWDNATDGSCTVRWENKTMYCIVSVFGLAI 112

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380029229|ref|XP_003698282.1| PREDICTED: dynein light chain Tctex-type 1-like [Apis florea]

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 85/106 (80%)

Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+++F VD++S IIKEAIE  IGGN Y  +KV+ + S VVE  + NL KL KP+KY+V  
Sbjct: 6   EETQFVVDDVSKIIKEAIEVSIGGNAYQHSKVNQWTSNVVEACLGNLTKLQKPYKYIVTC 65

Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
           T+MQK GAGLHT+SSC WD+ TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 66  TIMQKNGAGLHTASSCYWDNATDGSCTVRWENKTMYCIVSVFGLAI 111

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58332706|ref|NP_001011428.1| dynein, light chain, Tctex-type 1 [Xenopus (Silurana) tropicalis] gi|284521647|ref|NP_001087280.2| dynein, light chain, Tctex-type 1 [Xenopus laevis] gi|56971209|gb|AAH88060.1| dynein, light chain, Tctex-type 1 [Xenopus (Silurana) tropicalis]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/108 (63%), Positives = 82/108 (75%)

Query: 25  TTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVV 84
           T E+S F VDEIS IIKE+IE  IGGN Y   KV+ + + VVE  ++ L KL KPFKY+V
Sbjct: 6   TAEESSFVVDEISNIIKESIESAIGGNAYQHNKVNQWTTNVVEQTLSQLTKLGKPFKYIV 65

Query: 85  NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC WD+ TDGSCTVRWENKTMYCIVS + LA+
Sbjct: 66  TCVIMQKNGAGLHTASSCFWDNATDGSCTVRWENKTMYCIVSAFGLAI 113

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|389612238|dbj|BAM19632.1| dynein light chain [Papilio xuthus]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/107 (63%), Positives = 86/107 (80%)

Query: 26  TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
           TE+++F VD++S IIKEAIE+ IGG  Y   KV+ + S VVE+ ++ L KL KP+KY+V 
Sbjct: 10  TEENQFIVDDVSKIIKEAIENSIGGTAYQHNKVNQWTSAVVESCLSQLTKLQKPYKYIVT 69

Query: 86  GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            T+MQK GAGLHT+SSC WD+NTDGSCTVRWENKTMYCIVSV+ L +
Sbjct: 70  CTIMQKNGAGLHTASSCFWDNNTDGSCTVRWENKTMYCIVSVFGLGI 116

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350538929|ref|NP_001232352.1| putative cytoplasmic dynein light chain (T-complex testis-specific protein 1 homolog) [Taeniopygia guttata] gi|197127327|gb|ACH43825.1| putative cytoplasmic dynein light chain (T-complex testis-specific protein 1 homolog) [Taeniopygia guttata]

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 84/108 (77%)

Query: 25  TTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVV 84
           T E++ F VDE+S IIKEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V
Sbjct: 6   TGEEASFLVDEVSSIIKEAIEGAIGGNAYQHSKVNQWTTSVVEQTLSQLTKLGKPFKYIV 65

Query: 85  NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC WD+++DG+CTVRWENKTMYCIVS + LAL
Sbjct: 66  TCVIMQKNGAGLHTASSCFWDNSSDGTCTVRWENKTMYCIVSAFGLAL 113

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|351704116|gb|EHB07035.1| Dynein light chain Tctex-type 1 [Heterocephalus glaber]

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 84/108 (77%)

Query: 25  TTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVV 84
           ++E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V
Sbjct: 6   SSEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIV 65

Query: 85  NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC WD NTDGSCTVRWENKTMYCIVS + L++
Sbjct: 66  TCVIMQKNGAGLHTASSCFWDSNTDGSCTVRWENKTMYCIVSTFGLSI 113

Source: Heterocephalus glaber

Species: Heterocephalus glaber

Genus: Heterocephalus

Family: Bathyergidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410329731|gb|JAA33812.1| dynein, light chain, Tctex-type 1 [Pan troglodytes]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 6/122 (4%)

Query: 17  QSTAAPGGTTEDSK------FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIM 70
           Q T + GG  ED +      F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  +
Sbjct: 4   QYTLSAGGKMEDYQAAEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTL 63

Query: 71  ANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYAL 130
           + L KL KPFKY+V   +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L
Sbjct: 64  SQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGL 123

Query: 131 AL 132
           ++
Sbjct: 124 SI 125

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	132
RGD|620261	113	Dynlt1 "dynein light chain Tct	0.810	0.946	0.607	1.2e-33
UNIPROTKB|P63171	113	DYNLT1 "Dynein light chain Tct	0.803	0.938	0.613	1.5e-33
UNIPROTKB|P63172	113	DYNLT1 "Dynein light chain Tct	0.803	0.938	0.613	1.5e-33
FB|FBgn0024432	111	Dlc90F "Dynein light chain 90F	0.803	0.954	0.613	2.9e-32
UNIPROTKB|E1BVZ7	116	DYNLT3 "Uncharacterized protei	0.772	0.879	0.529	1.5e-26
UNIPROTKB|A6QLR8	116	DYNLT3 "Uncharacterized protei	0.772	0.879	0.470	1.6e-24
UNIPROTKB|Q6XXL8	116	DYNLT3 "Dynein light chain Tct	0.772	0.879	0.470	1.6e-24
UNIPROTKB|Q8SPS9	116	DYNLT3 "Dynein light chain Tct	0.772	0.879	0.460	2.6e-24
MGI|MGI:1914367	116	Dynlt3 "dynein light chain Tct	0.772	0.879	0.450	2.6e-24
RGD|1549755	116	Dynlt3 "dynein light chain Tct	0.772	0.879	0.450	4.2e-24

RGD|620261 Dynlt1 "dynein light chain Tctex-type 1" [Rattus norvegicus (taxid:10116)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 65/107 (60%), Positives = 83/107 (77%)

Query:    26 TEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVN 85
             +E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V 
Sbjct:     7 SEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVT 66

Query:    86 GTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
               +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct:    67 CVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

GO:0000132 "establishment of mitotic spindle orientation" evidence=ISS

GO:0003774 "motor activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005819 "spindle" evidence=IEA

GO:0005868 "cytoplasmic dynein complex" evidence=ISS;TAS

GO:0005874 "microtubule" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=TAS

GO:0007017 "microtubule-based process" evidence=ISO

GO:0007067 "mitosis" evidence=IEA

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=ISS

GO:0019060 "intracellular transport of viral proteins in host cell" evidence=ISO

GO:0032314 "regulation of Rac GTPase activity" evidence=IMP

GO:0042802 "identical protein binding" evidence=ISO

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0050768 "negative regulation of neurogenesis" evidence=ISS

GO:0051301 "cell division" evidence=IEA

GO:0051493 "regulation of cytoskeleton organization" evidence=IDA

UNIPROTKB|P63171 DYNLT1 "Dynein light chain Tctex-type 1" [Bos taurus (taxid:9913)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query:    27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
             E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V  
Sbjct:     8 EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67

Query:    87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct:    68 VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

GO:0050768 "negative regulation of neurogenesis" evidence=ISS

GO:0000132 "establishment of mitotic spindle orientation" evidence=ISS

GO:0005868 "cytoplasmic dynein complex" evidence=ISS;IDA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IMP

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=ISS

GO:0006886 "intracellular protein transport" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0003777 "microtubule motor activity" evidence=NAS

GO:0005819 "spindle" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

UNIPROTKB|P63172 DYNLT1 "Dynein light chain Tctex-type 1" [Homo sapiens (taxid:9606)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query:    27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
             E++ F VDE+S I+KEAIE  IGGN Y  +KV+ + + VVE  ++ L KL KPFKY+V  
Sbjct:     8 EETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTC 67

Query:    87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC WD +TDGSCTVRWENKTMYCIVS + L++
Sbjct:    68 VIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113

GO:0003774 "motor activity" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0046718 "viral entry into host cell" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0042802 "identical protein binding" evidence=IPI

GO:0005868 "cytoplasmic dynein complex" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0019060 "intracellular transport of viral proteins in host cell" evidence=IMP

GO:0008277 "regulation of G-protein coupled receptor protein signaling pathway" evidence=ISS

GO:0000132 "establishment of mitotic spindle orientation" evidence=ISS

GO:0050768 "negative regulation of neurogenesis" evidence=ISS

FB|FBgn0024432 Dlc90F "Dynein light chain 90F" [Drosophila melanogaster (taxid:7227)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 65/106 (61%), Positives = 81/106 (76%)

Query:    27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
             E+S+F VD++S  IKEAIE  IGGN Y   KV+ +  QVVE  +  L K  KP+KY+V  
Sbjct:     6 EESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTA 65

Query:    87 TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC W+++TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct:    66 MIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111

GO:0005875 "microtubule associated complex" evidence=ISS;NAS

GO:0042623 "ATPase activity, coupled" evidence=ISS

GO:0030286 "dynein complex" evidence=ISS

GO:0007018 "microtubule-based movement" evidence=ISS

GO:0007286 "spermatid development" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0045505 "dynein intermediate chain binding" evidence=IPI

GO:2001019 "positive regulation of retrograde axon cargo transport" evidence=IMP

GO:0007067 "mitosis" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|E1BVZ7 DYNLT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 54/102 (52%), Positives = 73/102 (71%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  DE   I+KE IE  +G   YN  KV+ + + +VE  + +L+KL K +KY+V   VMQ
Sbjct:    13 FNADEAHNIVKECIESVLGKADYNHNKVNQWTAAIVEQSLTHLVKLGKTYKYIVTCAVMQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             + GAGLHT+SSC WD  TDG+CTVRWEN+TM CIV+V+A+A+
Sbjct:    73 RSGAGLHTASSCFWDTTTDGTCTVRWENRTMNCIVNVFAVAI 114

GO:0000776 "kinetochore" evidence=IEA

GO:0005868 "cytoplasmic dynein complex" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|A6QLR8 DYNLT3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 48/102 (47%), Positives = 71/102 (69%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  DE   I+KE I+  +GG  YN   ++ + + +VE  +A+L+KL K +KY+V   V+Q
Sbjct:    13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLAHLVKLGKAYKYIVTCAVVQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct:    73 RSPYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

GO:0005886 "plasma membrane" evidence=IEA

GO:0005868 "cytoplasmic dynein complex" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

UNIPROTKB|Q6XXL8 DYNLT3 "Dynein light chain Tctex-type 3" [Ovis aries (taxid:9940)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 48/102 (47%), Positives = 71/102 (69%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  DE   I+KE I+  +GG  YN   ++ + + +VE  +A+L+KL K +KY+V   V+Q
Sbjct:    13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLAHLVKLGKAYKYIVTCAVVQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct:    73 RSPYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

GO:0005868 "cytoplasmic dynein complex" evidence=ISS

GO:0007346 "regulation of mitotic cell cycle" evidence=ISS

GO:0000776 "kinetochore" evidence=ISS

UNIPROTKB|Q8SPS9 DYNLT3 "Dynein light chain Tctex-type 3" [Canis lupus familiaris (taxid:9615)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 47/102 (46%), Positives = 70/102 (68%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  DE   I+KE I+  +GG  YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct:    13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +   G HT+SSC WD  +DG+CTVRWEN+TM CIV+V+A+A+
Sbjct:    73 RSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIAI 114

GO:0007346 "regulation of mitotic cell cycle" evidence=ISS

GO:0000776 "kinetochore" evidence=ISS

GO:0005868 "cytoplasmic dynein complex" evidence=ISS

GO:0005634 "nucleus" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

MGI|MGI:1914367 Dynlt3 "dynein light chain Tctex-type 3" [Mus musculus (taxid:10090)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 46/102 (45%), Positives = 71/102 (69%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  DE   I+KE ++  +GGN YN   ++ + + +VE  + +L+KL K +KY+V   V+Q
Sbjct:    13 FNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAVVQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +   G HT+SSC WD  +DG+CT+RWEN+TM CIV+V+A+A+
Sbjct:    73 RSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVAI 114

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005868 "cytoplasmic dynein complex" evidence=ISO

GO:0005874 "microtubule" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0007346 "regulation of mitotic cell cycle" evidence=ISO

GO:0030286 "dynein complex" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0051301 "cell division" evidence=IEA

RGD|1549755 Dynlt3 "dynein light chain Tctex-type 3" [Rattus norvegicus (taxid:10116)]

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 46/102 (45%), Positives = 71/102 (69%)

Query:    31 FAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQ 90
             F  +E   I+KE +E  +GGN YN   ++ + + +VE  +A+L+KL K +KY+V   V+Q
Sbjct:    13 FNAEEAHNIVKECVEGVLGGNDYNQNSINQWTASIVEQSIAHLVKLGKAYKYIVTCAVVQ 72

Query:    91 KLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
             +   G H +SSC WD  +DG+CTVRWEN+TM C+V+V+A+A+
Sbjct:    73 RSPYGFHVASSCFWDTTSDGTCTVRWENRTMNCVVNVFAVAI 114

GO:0000776 "kinetochore" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005868 "cytoplasmic dynein complex" evidence=ISO;IDA

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0007346 "regulation of mitotic cell cycle" evidence=IMP

GO:0042802 "identical protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54PG1	DYLT_DICDI	No assigned EC number	0.4466	0.7727	0.9189	yes	N/A
Q94524	DYLT_DROME	No assigned EC number	0.6132	0.8030	0.9549	yes	N/A
P51807	DYLT1_MOUSE	No assigned EC number	0.5794	0.8106	0.9469	yes	N/A
P63171	DYLT1_BOVIN	No assigned EC number	0.6132	0.8030	0.9380	yes	N/A
P63172	DYLT1_HUMAN	No assigned EC number	0.6132	0.8030	0.9380	yes	N/A
Q9Z336	DYLT1_RAT	No assigned EC number	0.6074	0.8106	0.9469	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	132
pfam03645	101	pfam03645, Tctex-1, Tctex-1 family	7e-40

>gnl|CDD|202715 pfam03645, Tctex-1, Tctex-1 family

 Score =  128 bits (324), Expect = 7e-40
 Identities = 43/101 (42%), Positives = 69/101 (68%), Gaps = 1/101 (0%)

Query: 33  VDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLD-KPFKYVVNGTVMQK 91
            D++  IIKE +E+ +GG  Y+  KV  +  ++ E I+  L +L  K +KYVV  T+ QK
Sbjct: 1   PDKVKEIIKEVLEEKLGGVEYDHEKVQQWSKEISEEILKRLKELGFKRYKYVVQVTIGQK 60

Query: 92  LGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            G G+H +S CLWD NTDGS +V++ENK+++C+V+V+ + +
Sbjct: 61  NGQGIHVASRCLWDPNTDGSASVKYENKSLFCVVTVFGVYI 101

Tctex-1 is a dynein light chain. It has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit this interaction. Length = 101

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	132
KOG4108|consensus	174		100.0
PF03645	101	Tctex-1: Tctex-1 family; InterPro: IPR005334 Tctex	100.0
KOG4081|consensus	115		99.97

>KOG4108|consensus

Probab=100.00  E-value=6.2e-40  Score=241.67  Aligned_cols=122  Identities=24%  Similarity=0.470  Sum_probs=112.2

Q ss_pred             CCCCCccccCCCCCCCCCCCCCHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhccC-CCceEEEEEEEE
Q psy2601          11 STKDVTQSTAAPGGTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLD-KPFKYVVNGTVM   89 (132)
Q Consensus        11 ~~~~~~~~nty~~~p~~~~~F~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l~-~ryK~vV~v~I~   89 (132)
                      |..+.+..|-+-++|.+.++|+++.|+.||+++|.+.|.+..||++.+.+|+++||++|+.+||+++ +||||||+|+|+
T Consensus        51 p~~~~t~r~~~~~rp~~~~~F~~~~v~~iI~~vl~e~L~~~~Y~~~~a~~lt~elae~I~~rvK~l~~~RYK~Vv~V~ig  130 (174)
T KOG4108|consen   51 PGARPTNRMNSLYRPEPGKKFPAERVEKIIEAVLTEKLADAEYDPDEALQLTKELAEEIKDRVKELGYPRYKYVVQVMIG  130 (174)
T ss_pred             cccCcccccccccccCcCccCCHHHHHHHHHHHHHHHhhhhccCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEEEEh
Confidence            3334444433346677799999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             EeCCcceeeeeeeeecCCCCCeEEEEEEcCcEEEEEEEEEEeC
Q psy2601          90 QKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL  132 (132)
Q Consensus        90 qk~gqgi~~as~~lWD~~~D~~~~~~~~n~~~~~v~tVf~iy~  132 (132)
                      |++|||++++|||+||.++|||+++.|+|+++||+|+|||+|.
T Consensus       131 e~~gqGv~~~sr~lWD~~~D~~~t~~f~~~S~favv~vf~~Y~  173 (174)
T KOG4108|consen  131 EQLGQGVYIASRCLWDEDRDGFVTYVFENPSLFAVVTVFGLYY  173 (174)
T ss_pred             hhhcchHHHHHHhhhccccCCceEEEEecCceeeeehhhhhcc
Confidence            9999999999999999999999999999999999999999983

>PF03645 Tctex-1: Tctex-1 family; InterPro: IPR005334 Tctex-1 is a dynein light chain

Probab=100.00  E-value=2.5e-37  Score=211.42  Aligned_cols=99  Identities=33%  Similarity=0.702  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhcc--CCCceEEEEEEEEEeCCcceeeeeeeeecCCCCCe
Q psy2601          34 DEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKL--DKPFKYVVNGTVMQKLGAGLHTSSSCLWDDNTDGS  111 (132)
Q Consensus        34 ~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l--~~ryK~vV~v~I~qk~gqgi~~as~~lWD~~~D~~  111 (132)
                      ++|++||+++|++.|++..|+++++++|++.|++.|+++|+++  ++||||||+|+|+|++|||++++|+|+||+++|||
T Consensus         1 ~~v~~ii~~~l~~~l~~~~Y~~~~~~~~~~~I~~~i~~~lk~~~~~~ryK~iv~~~I~q~~~qgi~~~s~~lWD~~~D~~   80 (101)
T PF03645_consen    1 EEVKEIIEEVLEEKLEDQKYDPEKAQQWSKEISDEILERLKKLGYSKRYKFIVQVTIGQKNGQGIHIASRCLWDPETDGY   80 (101)
T ss_dssp             HHHHHHHHHHHHHHHCTS---HHHHHHHHHHHHHHHHHHHHCC--T-SCEEEEEEEEEETTTS-EEEEEEEECETTT-EE
T ss_pred             CHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEEEEEecCCCCcchhccceeCCCCCcE
Confidence            5899999999999999999999999999999999999999999  59999999999999999999999999999999999


Q ss_pred             EEEEEEcCcEEEEEEEEEEeC
Q psy2601         112 CTVRWENKTMYCIVSVYALAL  132 (132)
Q Consensus       112 ~~~~~~n~~~~~v~tVf~iy~  132 (132)
                      ++++|+|++++|+|+|||+|+
T Consensus        81 ~~~~~~n~~~~~iv~Vf~iy~  101 (101)
T PF03645_consen   81 VSYKYENESLFAIVTVFGIYY  101 (101)
T ss_dssp             EEEEEESSSEEEEEEEEEEE-
T ss_pred             EEEEEEcCCEEEEEEEEEEEC
Confidence            999999999999999999996

Dynein translocates rhodopsin-bearing vesicles along microtubules and it has been shown that Tctex-1 can bind to the cytoplasmic tail of rhodopsin. An efficient vectorial transport system must be required to deliver large numbers of newly synthesized rhodopsin molecules (~107 molecules per day per photoreceptor) to the base of the outer segment of the photoreceptor, Tctex-1 may well play a role in this process. C-terminal rhodopsin mutations responsible for retinitis pigmentosa inhibit the interaction between Tctex-1 and rhodopsin, which may be the molecular basis of retinitis pigmentosa. In the mouse, the chromosomal location and pattern of expression of Tctex-1 make it a candidate for involvement in male sterility [].; PDB: 1YGT_A 3FM7_A 2PG1_E 1XDX_B.

>KOG4081|consensus

Probab=99.97  E-value=1.5e-30  Score=178.84  Aligned_cols=106  Identities=58%  Similarity=1.046  Sum_probs=102.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhccCCCceEEEEEEEEEeC-Ccceeeeeeeeec
Q psy2601          27 EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKL-GAGLHTSSSCLWD  105 (132)
Q Consensus        27 ~~~~F~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~qk~-gqgi~~as~~lWD  105 (132)
                      +...|..+++..|++++|++.+++..|++++..+|...+.++|++.|.+++++|||||+|+|+|+. |.|+|+|+.|+||
T Consensus         9 k~~~f~~~ev~~iik~~le~~ig~~~Y~h~k~~qw~~~vVeqil~~LvKl~k~yKyiVtcti~QK~~~~G~htAs~c~Wd   88 (115)
T KOG4081|consen    9 KEPAFEVEEVHKIIKECLESAIGGNAYQHDKVNQWTQKVVEQILTALVKLGKPYKYIVTCTIVQKSPGAGLHTASSCFWD   88 (115)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHHHHHcCCCeEEEEEEEEEeeCCCccceecceeeec
Confidence            356799999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             CCCCCeEEEEEEcCcEEEEEEEEEEeC
Q psy2601         106 DNTDGSCTVRWENKTMYCIVSVYALAL  132 (132)
Q Consensus       106 ~~~D~~~~~~~~n~~~~~v~tVf~iy~  132 (132)
                      ..+||..+++|+|++|+|++.||||.+
T Consensus        89 ~~tDgs~tvrwe~kTm~~iV~vf~Iai  115 (115)
T KOG4081|consen   89 TTTDGSYTVRWENKTMYCIVSVFAIAI  115 (115)
T ss_pred             cCCCCcEEEEeccceeeeeeEEeEeeC
Confidence            999999999999999999999999975

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	132
1ygt_A	111	Dynein Light Chain Tctex-1 Length = 111		2e-34
2pg1_E	111	Structural Analysis Of A Cytoplasmic Dynein Light C		5e-33
1xdx_A	114	Solution Structure Of The Tctex1 Light Chain From C		1e-28

>pdb|1YGT|A Chain A, Dynein Light Chain Tctex-1 Length = 111

Iteration: 1
 Score =  140 bits (354), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 65/106 (61%), Positives = 81/106 (76%)
Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+S+F VD++S  IKEAIE  IGGN Y   KV+ +  QVVE  +  L K  KP+KY+V  
Sbjct: 6   EESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTA 65
Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            +MQK GAGLHT+SSC W+++TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 66  MIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111

>pdb|2PG1|E Chain E, Structural Analysis Of A Cytoplasmic Dynein Light Chain- Intermediate Chain Complex Length = 111

Iteration: 1
 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 63/106 (59%), Positives = 79/106 (74%)
Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E+S+F VD++S  IKEAIE  IGGN Y   KV+ +  QVVE  +  L K  KP+KY+V  
Sbjct: 6   EESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTA 65
Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            + QK GAGLHT+SSC W+++TDGSCTVRWENKT YCIVSV+ LA+
Sbjct: 66  XIXQKNGAGLHTASSCYWNNDTDGSCTVRWENKTXYCIVSVFGLAV 111

>pdb|1XDX|A Chain A, Solution Structure Of The Tctex1 Light Chain From Chlamydomonas Inner Dynein Arm I1 Length = 114

Iteration: 1
 Score =  120 bits (302), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 75/106 (70%)
Query: 27  EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNG 86
           E++ F  D++S IIKE+I+  +    Y+ AKVS + S  +E  +  L  L+KPFKYVV  
Sbjct: 9   EEAAFVADDVSNIIKESIDAVLQNQQYSEAKVSQWTSSCLEHCIKRLTALNKPFKYVVTC 68
Query: 87  TVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
            +MQK GAGLHT++SC WD  TDGS TVRWENK+MYCI +V+ LA+
Sbjct: 69  IIMQKNGAGLHTAASCWWDSTTDGSRTVRWENKSMYCICTVFGLAI 114

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	132
1ygt_A	111	Cytoplasmic dynein light chain; domain swapping, p	2e-41
1xdx_A	114	Tctex1 light chain protein; chlamydomonas flagella	2e-38

>1ygt_A Cytoplasmic dynein light chain; domain swapping, protein transport; 1.70A {Drosophila melanogaster} PDB: 2pg1_E 3fm7_A Length = 111

 Score =  132 bits (333), Expect = 2e-41
 Identities = 65/108 (60%), Positives = 82/108 (75%)

Query: 25  TTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVV 84
           + E+S+F VD++S  IKEAIE  IGGN Y   KV+ +  QVVE  +  L K  KP+KY+V
Sbjct: 4   SREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIV 63

Query: 85  NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT+SSC W+++TDGSCTVRWENKTMYCIVSV+ LA+
Sbjct: 64  TAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLAV 111

>1xdx_A Tctex1 light chain protein; chlamydomonas flagella, tctex1 dimer, solution structure, contractIle protein; NMR {Chlamydomonas reinhardtii} Length = 114

 Score =  124 bits (313), Expect = 2e-38
 Identities = 56/108 (51%), Positives = 75/108 (69%)

Query: 25  TTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVV 84
             E++ F  D++S IIKE+I+  +    Y+ AKVS + S  +E  +  L  L+KPFKYVV
Sbjct: 7   AVEEAAFVADDVSNIIKESIDAVLQNQQYSEAKVSQWTSSCLEHCIKRLTALNKPFKYVV 66

Query: 85  NGTVMQKLGAGLHTSSSCLWDDNTDGSCTVRWENKTMYCIVSVYALAL 132
              +MQK GAGLHT++SC WD  TDGS TVRWENK+MYCI +V+ LA+
Sbjct: 67  TCIIMQKNGAGLHTAASCWWDSTTDGSRTVRWENKSMYCICTVFGLAI 114

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	132
1xdx_A	114	Tctex1 light chain protein; chlamydomonas flagella	100.0
1ygt_A	111	Cytoplasmic dynein light chain; domain swapping, p	100.0

>1xdx_A Tctex1 light chain protein; chlamydomonas flagella, tctex1 dimer, solution structure, contractIle protein; NMR {Chlamydomonas reinhardtii}

Probab=100.00  E-value=7e-43  Score=243.60  Aligned_cols=110  Identities=51%  Similarity=0.893  Sum_probs=106.7

Q ss_pred             CCCC-CCCCCCHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhccCCCceEEEEEEEEEeCCcceeeeee
Q psy2601          23 GGTT-EDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSS  101 (132)
Q Consensus        23 ~~p~-~~~~F~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~qk~gqgi~~as~  101 (132)
                      .+|+ ++.+|++++|+.||+++|++.|++..|+++++.+|++.|++.|+++|++|++||||||+|+|+|++|||++++|+
T Consensus         4 ~~p~~~~~~f~~~~v~~ii~~~l~~~L~~~~Y~~~~~~~~~~~i~~~i~~~lk~l~~~YK~iV~v~I~q~~gqGi~~as~   83 (114)
T 1xdx_A            4 VDPAVEEAAFVADDVSNIIKESIDAVLQNQQYSEAKVSQWTSSCLEHCIKRLTALNKPFKYVVTCIIMQKNGAGLHTAAS   83 (114)
T ss_dssp             CCSSTTCCSCCCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEECTTTSCCEEEEE
T ss_pred             cCCCccCCCCCHHHHHHHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEcCCCceeeeee
Confidence            3566 678999999999999999999999999999999999999999999999999899999999999999999999999


Q ss_pred             eeecCCCCCeEEEEEEcCcEEEEEEEEEEeC
Q psy2601         102 CLWDDNTDGSCTVRWENKTMYCIVSVYALAL  132 (132)
Q Consensus       102 ~lWD~~~D~~~~~~~~n~~~~~v~tVf~iy~  132 (132)
                      |+||+++|||++++|+|++|+|+++|||+||
T Consensus        84 c~WD~~~D~~~s~~~~n~sl~~v~tVfgv~i  114 (114)
T 1xdx_A           84 CWWDSTTDGSRTVRWENKSMYCICTVFGLAI  114 (114)
T ss_dssp             ECSCSSSCCCEEEEEESSSCEEEEEEEEECC
T ss_pred             eeEcCCCCCEEEEEEECCCEEEEEEEEEEEC
Confidence            9999999999999999999999999999997

>1ygt_A Cytoplasmic dynein light chain; domain swapping, protein transport; 1.70A {Drosophila melanogaster} PDB: 2pg1_E 3fm7_A

Probab=100.00  E-value=1.1e-42  Score=241.66  Aligned_cols=109  Identities=60%  Similarity=1.029  Sum_probs=103.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhhCCCCcCchhHHHHHHHHHHHHHHHHhccCCCceEEEEEEEEEeCCcceeeeeeee
Q psy2601          24 GTTEDSKFAVDEISCIIKEAIEDCIGGNTYNSAKVSTYVSQVVETIMANLIKLDKPFKYVVNGTVMQKLGAGLHTSSSCL  103 (132)
Q Consensus        24 ~p~~~~~F~~~~v~~ii~~vl~~~L~~~~Y~~~~~~~~~~~I~~~I~~~lk~l~~ryK~vV~v~I~qk~gqgi~~as~~l  103 (132)
                      +|.++.+|++++|+.||+++|++.|++..|+++++.+|++.|++.|+++|++|++||||||+|+|+|++|||++++|+|+
T Consensus         3 ~~~~~~~F~~~~v~~ii~~~l~~~L~~~~Y~~~~~~~~~~~i~~~i~~~lk~l~~~YK~iV~v~I~q~~gqG~~~as~c~   82 (111)
T 1ygt_A            3 DSREESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCY   82 (111)
T ss_dssp             -----CCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEEEEEECSSCCCCCCCCCC
T ss_pred             CcccCCCCCHHHHHHHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHHHHHHHhhCCCceEEEEEEEEEcCCCceeeeeeeE
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCeEEEEEEcCcEEEEEEEEEEeC
Q psy2601         104 WDDNTDGSCTVRWENKTMYCIVSVYALAL  132 (132)
Q Consensus       104 WD~~~D~~~~~~~~n~~~~~v~tVf~iy~  132 (132)
                      ||+++|||++++|+|++|+|+++|||+||
T Consensus        83 WD~~~D~~~s~~~~n~sl~~v~tVfgv~i  111 (111)
T 1ygt_A           83 WNNDTDGSCTVRWENKTMYCIVSVFGLAV  111 (111)
T ss_dssp             SCTTTCEEEEEEEECSSEEEEEEEEEEEC
T ss_pred             EcCCCCCeEEEEEECCCEEEEEEEEEEEC
Confidence            99999999999999999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00