Psyllid ID: psy2700


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------
MPDLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLMKEEMPDLMKEEKPDLMKEEKLDIFTCT
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcc
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
MPDLMQNERLDLMqeekpdlmreekpdlmreekpdlmkeekpdfmkdeRSDLMKeempdlmkeempdlmkeekpdlmkeekldiftct
MPDLMQNERLdlmqeekpdlmreekpdlmreekpdlmkeekpdfmkderSDLMKEEMPDLMKEEMPDLMkeekpdlmkeekldiftct
MPDLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLMKEEMPDLMKEEKPDLMKEEKLDIFTCT
****************************************************************************************
*********************************************************************************LDIFTCT
MPDLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLMKEEMPDLMKEEKPDLMKEEKLDIFTCT
**************************************************************************************C*
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MPDLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLMKEEMPDLMKEEKPDLMKEEKLDIFTCT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query88
156395924 252 predicted protein [Nematostella vectensi 0.954 0.333 0.25 8e-12
156352116126 predicted protein [Nematostella vectensi 0.954 0.666 0.238 2e-10
296004887 845 Serine/Threonine protein kinase, FIKK fa 0.931 0.097 0.349 7e-06
340381500 200 PREDICTED: hypothetical protein LOC10063 0.943 0.415 0.253 1e-05
431920838 475 hypothetical protein PAL_GLEAN10007872 [ 0.590 0.109 0.410 2e-05
297582830 649 choline/carnitine/betaine transporter [B 0.75 0.101 0.421 4e-05
195396601 1057 GJ16627 [Drosophila virilis] gi|19414668 0.852 0.070 0.385 8e-05
77412994 351 Gram positive anchor domain protein [Str 0.863 0.216 0.375 0.0001
255619785137 conserved hypothetical protein [Ricinus 0.954 0.613 0.25 0.0001
291226155 1072 PREDICTED: centromere protein J-like [Sa 0.954 0.078 0.261 0.0002
>gi|156395924|ref|XP_001637360.1| predicted protein [Nematostella vectensis] gi|156224471|gb|EDO45297.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 31/84 (36%)

Query: 2   PDLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLM 61
           PD+      D+     PD+     PD+     PD+     PD       D+     PD+ 
Sbjct: 157 PDVFATSGPDVFATSGPDVFATSGPDVFATSGPDVFATSGPDVFATSGPDVFATSGPDVF 216

Query: 62  KEEMPDLMKEEKPDLMKEEKLDIF 85
               PD+     PD+     LD+F
Sbjct: 217 ATSGPDVFATSGPDVFATSGLDVF 240




Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|156352116|ref|XP_001622614.1| predicted protein [Nematostella vectensis] gi|156209193|gb|EDO30514.1| predicted protein [Nematostella vectensis] Back     alignment and taxonomy information
>gi|296004887|ref|XP_002808790.1| Serine/Threonine protein kinase, FIKK family [Plasmodium falciparum 3D7] gi|225632179|emb|CAX64063.1| Serine/Threonine protein kinase, FIKK family [Plasmodium falciparum 3D7] Back     alignment and taxonomy information
>gi|340381500|ref|XP_003389259.1| PREDICTED: hypothetical protein LOC100638738 [Amphimedon queenslandica] Back     alignment and taxonomy information
>gi|431920838|gb|ELK18609.1| hypothetical protein PAL_GLEAN10007872 [Pteropus alecto] Back     alignment and taxonomy information
>gi|297582830|ref|YP_003698610.1| choline/carnitine/betaine transporter [Bacillus selenitireducens MLS10] gi|297141287|gb|ADH98044.1| choline/carnitine/betaine transporter [Bacillus selenitireducens MLS10] Back     alignment and taxonomy information
>gi|195396601|ref|XP_002056919.1| GJ16627 [Drosophila virilis] gi|194146686|gb|EDW62405.1| GJ16627 [Drosophila virilis] Back     alignment and taxonomy information
>gi|77412994|ref|ZP_00789197.1| Gram positive anchor domain protein [Streptococcus agalactiae 515] gi|77161006|gb|EAO72114.1| Gram positive anchor domain protein [Streptococcus agalactiae 515] Back     alignment and taxonomy information
>gi|255619785|ref|XP_002540048.1| conserved hypothetical protein [Ricinus communis] gi|223499691|gb|EEF22336.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|291226155|ref|XP_002733060.1| PREDICTED: centromere protein J-like [Saccoglossus kowalevskii] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query88
GENEDB_PFALCIPARUM|MAL7P1.144 845 MAL7P1.144 "protein kinase, pu 0.920 0.095 0.353 1.8e-09
UNIPROTKB|C0H4P3 845 FIKK7.1 "Serine/Threonine prot 0.920 0.095 0.353 1.8e-09
WB|WBGene00022708224 ZK354.7 [Caenorhabditis elegan 0.852 0.334 0.386 1.3e-08
WB|WBGene0000643618 ttn-1 [Caenorhabditis elegans 0.863 4.222 0.355 1.6e-06
ZFIN|ZDB-GENE-090312-121 718 cnga3b "cyclic nucleotide gate 0.761 0.093 0.417 2.4e-06
UNIPROTKB|F1P4Z1 1035 MAP1B "Uncharacterized protein 0.840 0.071 0.367 6.1e-06
ZFIN|ZDB-GENE-090611-2 706 cnga3a "cyclic nucleotide gate 0.829 0.103 0.407 6.2e-06
GENEDB_PFALCIPARUM|PFL1370w 1057 Pfnek-1 "NIMA-related protein 0.920 0.076 0.246 1e-05
UNIPROTKB|Q8I5D5 1057 nek-1 "NIMA-related protein ki 0.920 0.076 0.246 1e-05
GENEDB_PFALCIPARUM|PFA0685c 347 PfMC-2TM_1.1 "Plasmodium falci 0.920 0.233 0.320 1.2e-05
GENEDB_PFALCIPARUM|MAL7P1.144 MAL7P1.144 "protein kinase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
 Score = 150 (57.9 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 29/82 (35%), Positives = 58/82 (70%)

Query:     3 DLMQNERLDLMQEEKPDLMREEKPDLMREEKPDLMKEEKPDFMKDERSDLMKEEMPDLMK 62
             DL++NE  DL++  K DL++ ++ DL++ ++ DL+K ++ D +K++  DL+K +  DL+K
Sbjct:   123 DLLKNEEGDLLKN-KGDLIKNKEGDLLKSKEGDLIKNKEGDLIKNKEGDLLKSKEGDLIK 181

Query:    63 EEMPDLMKEEKPDLMKEEKLDI 84
              +  DL+K ++ DL+K ++ D+
Sbjct:   182 NKEGDLLKSKEGDLIKNKEGDL 203


GO:0020011 "apicoplast" evidence=RCA
UNIPROTKB|C0H4P3 FIKK7.1 "Serine/Threonine protein kinase, FIKK family" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
WB|WBGene00022708 ZK354.7 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
WB|WBGene00006436 ttn-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090312-121 cnga3b "cyclic nucleotide gated channel alpha 3b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P4Z1 MAP1B "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090611-2 cnga3a "cyclic nucleotide gated channel alpha 3a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFL1370w Pfnek-1 "NIMA-related protein kinase, Pfnek-1" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8I5D5 nek-1 "NIMA-related protein kinase, Pfnek-1" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PFA0685c PfMC-2TM_1.1 "Plasmodium falciparum Maurer's Cleft 2 transmembrane domain protein 1.1, PfMC-2TM_1.1" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00