Psyllid ID: psy2810

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80
Protein Sequence
MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLDQDRPGQESNM
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHccccccccccccccccccccHHHHHHEEEHHHHHHHHHHHHHHHHHHHHcccccEcccHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mdefcgtkfwdqnltwntnepeltpcfestvlvwtpclflwvfsplEAYYLVnskfrdipwnllnrskldqdrpgqesnm
Flexible Loop (DISEMBL)
mdefcgtkfwdqnltwntnEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFrdipwnllnrskldqdrpgqesnm
Low Complexity Region (SEG)
MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLDQDRPGQESNM
Disordered region (IsUnstruct)
***FCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLN***************
Disordered Region (DISOPRED)
*DEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLDQ**P******
Disordered Region (DISEMBL)
MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKL***********
Disordered Region (DISPRO)
*DEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLDQDRP******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLDQDRPGQESNM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	80	2.2.26 [Sep-21-2011]
O88563	1522	Canalicular multispecific	yes	N/A	0.85	0.044	0.438	4e-13
B2RX12	1523	Canalicular multispecific	yes	N/A	0.85	0.044	0.424	1e-12
O15438	1527	Canalicular multispecific	yes	N/A	0.637	0.033	0.482	2e-11
Q8HXQ5	1530	Multidrug resistance-asso	no	N/A	0.85	0.044	0.416	2e-11
P33527	1531	Multidrug resistance-asso	no	N/A	0.75	0.039	0.45	1e-10
O35379	1528	Multidrug resistance-asso	no	N/A	0.75	0.039	0.433	2e-10
Q5F364	1525	Multidrug resistance-asso	yes	N/A	0.75	0.039	0.483	3e-10
Q8CG09	1532	Multidrug resistance-asso	no	N/A	0.85	0.044	0.388	4e-10
Q6UR05	1531	Multidrug resistance-asso	no	N/A	0.75	0.039	0.416	4e-10
Q864R9	1531	Multidrug resistance-asso	N/A	N/A	0.75	0.039	0.45	2e-08

>sp|O88563|MRP3_RAT Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 1  MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSK 55
          MD  CG+     KFWD NLT  TN P+LTPCF++++L W PC++LW   P   +YL + +
Sbjct: 1  MDRLCGSGELGSKFWDSNLTVYTNTPDLTPCFQNSLLAWVPCIYLWAALPCYLFYLRHHR 60

Query: 56 FRDIPWNLLNRSK 68
             I  + L+R K
Sbjct: 61 LGYIVLSCLSRLK 73

May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes.
Rattus norvegicus (taxid: 10116)

>sp|B2RX12|MRP3_MOUSE Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 5/73 (6%)

Query: 1  MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSK 55
          MD  CG+     KFWD NL+  TN P+LTPCF++++L W PC++LW   P   +YL + +
Sbjct: 1  MDRLCGSGELGSKFWDSNLSIYTNTPDLTPCFQNSLLAWVPCIYLWAALPCYLFYLRHHQ 60

Query: 56 FRDIPWNLLNRSK 68
             I  + L+R K
Sbjct: 61 LGYIVLSWLSRLK 73

May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes.

Mus musculus (taxid: 10090)

>sp|O15438|MRP3_HUMAN Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=1 SV=3

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 5/56 (8%)

Query: 1  MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYL 51
          MD  CG+     KFWD NL+ +T  P+LTPCF++++L W PC++LWV  P    YL
Sbjct: 1  MDALCGSGELGSKFWDSNLSVHTENPDLTPCFQNSLLAWVPCIYLWVALPCYLLYL 56

May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes.

Homo sapiens (taxid: 9606)

>sp|Q8HXQ5|MRP1_BOVIN Multidrug resistance-associated protein 1 OS=Bos taurus GN=ABCC1 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 1  MDEFCGTK----FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKF 56
          + +FC       FW+ N+TWNT+ P+ T CF++TVLVW PC +LWV  P    YL +   
Sbjct: 3  LRDFCSVDGSDLFWEWNVTWNTSNPDFTKCFQNTVLVWVPCSYLWVCFPFYFLYLSHHDR 62

Query: 57 RDIPWNLLNRSK 68
            I    LN++K
Sbjct: 63 GYIQMTHLNKAK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. May protect milk against xenobiotics. Hydrolyzes ATP with low efficiency.

Bos taurus (taxid: 9913)

>sp|P33527|MRP1_HUMAN Multidrug resistance-associated protein 1 OS=Homo sapiens GN=ABCC1 PE=1 SV=3

 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 9  FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSK 68
           WD N+TWNT+ P+ T CF++TVLVW PC +LW   P    YL       I    LN++K
Sbjct: 15 LWDWNVTWNTSNPDFTKCFQNTVLVWVPCFYLWACFPFYFLYLSRHDRGYIQMTPLNKTK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Homo sapiens (taxid: 9606)

>sp|O35379|MRP1_MOUSE Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 36/60 (60%)

Query: 9  FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSK 68
           WD N+TW+T+ P+ T CF++TVL W PC +LW   PL  +YL       I    LN++K
Sbjct: 15 LWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFFYLSRHDRGYIQMTHLNKTK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Mus musculus (taxid: 10090)

>sp|Q5F364|MRP1_CHICK Multidrug resistance-associated protein 1 OS=Gallus gallus GN=ABCC1 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 40/60 (66%)

Query: 9  FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSK 68
          FWD NLTW+T  P+ T CF++TVLVW PC++LWV  P    YL +     I  ++LN++K
Sbjct: 15 FWDWNLTWHTENPDFTQCFQNTVLVWVPCIYLWVCFPAYFLYLRSHDRGYIQMSILNKAK 74

Mediates ATP-dependent export of organic anions and drugs from the cytoplasm. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Gallus gallus (taxid: 9031)

>sp|Q8CG09|MRP1_RAT Multidrug resistance-associated protein 1 OS=Rattus norvegicus GN=Abcc1 PE=1 SV=2

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 1  MDEFCGTK----FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKF 56
          +  FC +      WD N+TW+T+ P+ T CF++TVL W PC +LW   PL   YL     
Sbjct: 3  LSSFCSSDGSDPLWDWNVTWHTSNPDFTKCFQNTVLTWVPCFYLWSCFPLYFLYLSRHDR 62

Query: 57 RDIPWNLLNRSK 68
            I    LN++K
Sbjct: 63 GYIQMTHLNKAK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Rattus norvegicus (taxid: 10116)

>sp|Q6UR05|MRP1_CANFA Multidrug resistance-associated protein 1 OS=Canis familiaris GN=ABCC1 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query: 9  FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSK 68
          FW+ +++WNT+ P+ T CF++TVLVW PC +LW+  P    YL       I    LN++K
Sbjct: 15 FWEWDVSWNTSNPDFTKCFQNTVLVWVPCCYLWLCFPFYFLYLSRHDRGYIQMTYLNKTK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Canis familiaris (taxid: 9615)

>sp|Q864R9|MRP1_MACFA Multidrug resistance-associated protein 1 OS=Macaca fascicularis GN=ABCC1 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%)

Query: 9  FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSK 68
           WD N+TW T+ P+ T CF++TVLVW PC +LW   P    YL       I   LLN++K
Sbjct: 15 LWDWNVTWYTSNPDFTKCFQNTVLVWVPCFYLWACFPFYFLYLSRHDRGYIQMTLLNKTK 74

Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs. Hydrolyzes ATP with low efficiency.

Macaca fascicularis (taxid: 9541)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
328706536	1508	PREDICTED: multidrug resistance-associat	0.862	0.045	0.724	2e-28
328706529	1515	PREDICTED: multidrug resistance-associat	0.862	0.045	0.652	1e-24
158298785	1877	AGAP009835-PA [Anopheles gambiae str. PE	0.862	0.036	0.652	7e-24
270013629	1806	hypothetical protein TcasGA2_TC012253 [T	0.862	0.038	0.681	1e-22
189240635	1890	PREDICTED: similar to AGAP009835-PA [Tri	0.862	0.036	0.681	1e-22
157107349	1089	multidrug resistance protein 2 (atp-bind	0.862	0.063	0.652	7e-22
157107347	1069	multidrug resistance protein 2 (atp-bind	0.862	0.064	0.652	7e-22
312378721	992	hypothetical protein AND_09640 [Anophele	0.862	0.069	0.666	1e-21
170052086	1505	multidrug resistance-associated protein	0.862	0.045	0.652	1e-20
328777607	1524	PREDICTED: multidrug resistance-associat	0.85	0.044	0.602	1e-20

>gi|328706536|ref|XP_001944542.2| PREDICTED: multidrug resistance-associated protein 1-like [Acyrthosiphon pisum]

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/69 (72%), Positives = 60/69 (86%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          +D FCG+ FWD NL+WNT +P++TPCFE T+LVW PCLFLW+FSPLE YYLVNSK+RDIP
Sbjct: 6  IDRFCGSTFWDWNLSWNTTDPDVTPCFEKTILVWAPCLFLWLFSPLEIYYLVNSKYRDIP 65

Query: 61 WNLLNRSKL 69
          WN LN SK+
Sbjct: 66 WNRLNMSKV 74

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328706529|ref|XP_003243122.1| PREDICTED: multidrug resistance-associated protein 1-like [Acyrthosiphon pisum]

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/69 (65%), Positives = 57/69 (82%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          +D FCG+ FWD N +WNT +P++T CFE T LVW+PCLFLW+F PLE YYLV+S++RDIP
Sbjct: 6  LDGFCGSPFWDWNTSWNTTDPDVTLCFEKTALVWSPCLFLWLFCPLEVYYLVHSRYRDIP 65

Query: 61 WNLLNRSKL 69
          WN LN +KL
Sbjct: 66 WNWLNLAKL 74

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158298785|ref|XP_553715.3| AGAP009835-PA [Anopheles gambiae str. PEST] gi|157014052|gb|EAL39215.3| AGAP009835-PA [Anopheles gambiae str. PEST]

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MDEFCG++FWD NLTW T++P+LTPCF+ TVLVW PC FLW+FS LE YYL  S  +D+P
Sbjct: 9  MDEFCGSRFWDLNLTWYTDDPDLTPCFQQTVLVWAPCAFLWLFSFLELYYLRKSANKDVP 68

Query: 61 WNLLNRSKL 69
          W+ +N SKL
Sbjct: 69 WSFVNVSKL 77

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270013629|gb|EFA10077.1| hypothetical protein TcasGA2_TC012253 [Tribolium castaneum]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MD+FCG++FW+  LTW+TN+P+LT CFE TVLVW PC FLW FS LE YY+++SK RDIP
Sbjct: 6  MDKFCGSEFWNSTLTWHTNDPDLTKCFERTVLVWVPCAFLWTFSSLEVYYILHSKRRDIP 65

Query: 61 WNLLNRSKL 69
          WN LN SKL
Sbjct: 66 WNWLNVSKL 74

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189240635|ref|XP_969354.2| PREDICTED: similar to AGAP009835-PA [Tribolium castaneum]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 1   MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
           MD+FCG++FW+  LTW+TN+P+LT CFE TVLVW PC FLW FS LE YY+++SK RDIP
Sbjct: 108 MDKFCGSEFWNSTLTWHTNDPDLTKCFERTVLVWVPCAFLWTFSSLEVYYILHSKRRDIP 167

Query: 61  WNLLNRSKL 69
           WN LN SKL
Sbjct: 168 WNWLNVSKL 176

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107349|ref|XP_001649739.1| multidrug resistance protein 2 (atp-binding cassette protein c) [Aedes aegypti] gi|108879616|gb|EAT43841.1| AAEL004743-PA [Aedes aegypti]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MDEFCG++FWD NLTW T +P+LTPCF+ TVLVW PC FLWVFS +E +YL NS+ R++P
Sbjct: 6  MDEFCGSRFWDLNLTWYTEDPDLTPCFQQTVLVWAPCAFLWVFSLIELFYLRNSRNRNVP 65

Query: 61 WNLLNRSKL 69
          W++LN +KL
Sbjct: 66 WSVLNITKL 74

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107347|ref|XP_001649738.1| multidrug resistance protein 2 (atp-binding cassette protein c) [Aedes aegypti] gi|108879615|gb|EAT43840.1| AAEL004743-PB [Aedes aegypti]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 58/69 (84%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MDEFCG++FWD NLTW T +P+LTPCF+ TVLVW PC FLWVFS +E +YL NS+ R++P
Sbjct: 6  MDEFCGSRFWDLNLTWYTEDPDLTPCFQQTVLVWAPCAFLWVFSLIELFYLRNSRNRNVP 65

Query: 61 WNLLNRSKL 69
          W++LN +KL
Sbjct: 66 WSVLNITKL 74

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312378721|gb|EFR25217.1| hypothetical protein AND_09640 [Anopheles darlingi]

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 56/69 (81%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MD+FCG++FWD NLTW T++P+LTPCF+ TVLVW PC FLWVFS LE YYL  S  +DIP
Sbjct: 6  MDDFCGSRFWDLNLTWYTDDPDLTPCFQQTVLVWAPCAFLWVFSLLELYYLRRSPNKDIP 65

Query: 61 WNLLNRSKL 69
          W+ +N SKL
Sbjct: 66 WSFVNLSKL 74

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170052086|ref|XP_001862062.1| multidrug resistance-associated protein 1 [Culex quinquefasciatus] gi|167873087|gb|EDS36470.1| multidrug resistance-associated protein 1 [Culex quinquefasciatus]

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 54/69 (78%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          M+EFCG++FWD NLTWNT +PELTPCFE TVLVW PC FLW FS +E  YL  S  R++P
Sbjct: 1  MNEFCGSEFWDYNLTWNTTDPELTPCFEQTVLVWVPCGFLWAFSIIELSYLRASGNRNVP 60

Query: 61 WNLLNRSKL 69
          WN+LN  K+
Sbjct: 61 WNVLNVLKM 69

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777607|ref|XP_003249371.1| PREDICTED: multidrug resistance-associated protein 1-like [Apis mellifera]

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/68 (60%), Positives = 54/68 (79%)

Query: 1  MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
          MD+FCGT+FW+ NL WNT++PE+T CF+ TVLVW PC FLW+FS +E YY +NSK ++IP
Sbjct: 1  MDQFCGTEFWNYNLIWNTDDPEITECFQKTVLVWVPCAFLWLFSGIEIYYFLNSKNKNIP 60

Query: 61 WNLLNRSK 68
          +  L  SK
Sbjct: 61 YTWLFISK 68

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	80
FB|FBgn0032456	1549	MRP "Multidrug-Resistance like	0.85	0.043	0.588	2.7e-18
ZFIN|ZDB-GENE-120214-28	1529	si:dkeyp-72e1.5 "si:dkeyp-72e1	0.85	0.044	0.5	1.1e-12
UNIPROTKB|J9NY13	1523	ABCC3 "Uncharacterized protein	0.637	0.033	0.509	3.9e-12
UNIPROTKB|F1LMJ7	1515	Abcc3 "Canalicular multispecif	0.85	0.044	0.438	1e-11
RGD|71101	1522	Abcc3 "ATP-binding cassette, s	0.85	0.044	0.438	1e-11
UNIPROTKB|F1P204	1265	ABCC1 "Multidrug resistance-as	0.725	0.045	0.516	1.4e-11
UNIPROTKB|Q5F364	1525	ABCC1 "Multidrug resistance-as	0.725	0.038	0.516	1.7e-11
MGI|MGI:1923658	1523	Abcc3 "ATP-binding cassette, s	0.85	0.044	0.424	4.5e-11
ZFIN|ZDB-GENE-050517-18	1507	abcc6a "ATP-binding cassette,	0.862	0.045	0.438	7.3e-11
UNIPROTKB|Q8HXQ5	1530	ABCC1 "Multidrug resistance-as	0.825	0.043	0.428	1.5e-10

FB|FBgn0032456 MRP "Multidrug-Resistance like Protein 1" [Drosophila melanogaster (taxid:7227)]

 Score = 236 (88.1 bits), Expect = 2.7e-18, P = 2.7e-18
 Identities = 40/68 (58%), Positives = 46/68 (67%)

Query:     1 MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIP 60
             MD FCG+ FW+   TW TN+P+ TPCFE T LVWTPC F W F   + YYL  S  R+IP
Sbjct:     9 MDRFCGSTFWNATETWYTNDPDFTPCFEQTALVWTPCAFYWAFVIFDFYYLKASLDRNIP 68

Query:    61 WNLLNRSK 68
             WN LN SK
Sbjct:    69 WNKLNVSK 76

GO:0008559 "xenobiotic-transporting ATPase activity" evidence=ISS

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0043492 "ATPase activity, coupled to movement of substances" evidence=IDA

GO:0031427 "response to methotrexate" evidence=IEP

ZFIN|ZDB-GENE-120214-28 si:dkeyp-72e1.5 "si:dkeyp-72e1.5" [Danio rerio (taxid:7955)]

 Score = 183 (69.5 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 36/72 (50%), Positives = 46/72 (63%)

Query:     1 MDEFC---GTK-FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKF 56
             +D FC   G+   WD N TW T  P+LTPCF++TVLVW PCL+LW+F+PL   YL +   
Sbjct:     3 IDSFCSLDGSDPLWDWNRTWQTYYPDLTPCFQNTVLVWIPCLYLWLFAPLYILYLKSHDR 62

Query:    57 RDIPWNLLNRSK 68
               I    LNR+K
Sbjct:    63 GYICMTHLNRAK 74

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|J9NY13 ABCC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 178 (67.7 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 26/51 (50%), Positives = 38/51 (74%)

Query:     1 MDEFCGTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYL 51
             MD  CG+KFWD NL+ +T+ P+LTPCF++++L W PC++LW   P   +YL
Sbjct:     1 MDALCGSKFWDSNLSVHTDNPDLTPCFQNSLLAWVPCIYLWAALPCYLFYL 51

GO:0005524 "ATP binding" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1LMJ7 Abcc3 "Canalicular multispecific organic anion transporter 2" [Rattus norvegicus (taxid:10116)]

 Score = 174 (66.3 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query:     1 MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSK 55
             MD  CG+     KFWD NLT  TN P+LTPCF++++L W PC++LW   P   +YL + +
Sbjct:     1 MDRLCGSGELGSKFWDSNLTVYTNTPDLTPCFQNSLLAWVPCIYLWAALPCYLFYLRHHR 60

Query:    56 FRDIPWNLLNRSK 68
                I  + L+R K
Sbjct:    61 LGYIVLSCLSRLK 73

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

RGD|71101 Abcc3 "ATP-binding cassette, subfamily C (CFTR/MRP), member 3" [Rattus norvegicus (taxid:10116)]

 Score = 174 (66.3 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query:     1 MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSK 55
             MD  CG+     KFWD NLT  TN P+LTPCF++++L W PC++LW   P   +YL + +
Sbjct:     1 MDRLCGSGELGSKFWDSNLTVYTNTPDLTPCFQNSLLAWVPCIYLWAALPCYLFYLRHHR 60

Query:    56 FRDIPWNLLNRSK 68
                I  + L+R K
Sbjct:    61 LGYIVLSCLSRLK 73

GO:0005524 "ATP binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISO

GO:0006855 "drug transmembrane transport" evidence=IMP

GO:0008559 "xenobiotic-transporting ATPase activity" evidence=IMP

GO:0010033 "response to organic substance" evidence=IEP

GO:0010243 "response to organic nitrogen" evidence=IEP

GO:0014070 "response to organic cyclic compound" evidence=IEP

GO:0015238 "drug transmembrane transporter activity" evidence=IMP

GO:0015432 "bile acid-exporting ATPase activity" evidence=IMP

GO:0015722 "canalicular bile acid transport" evidence=IDA

GO:0015893 "drug transport" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=IDA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IDA

UNIPROTKB|F1P204 ABCC1 "Multidrug resistance-associated protein 1" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%)

Query:     9 FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYL-VNSKFRD-IPWNLLNR 66
             FWD NLTW+T  P+ T CF++TVLVW PC++LWV  P  AY+L + S  R  I  ++LN+
Sbjct:    15 FWDWNLTWHTENPDFTQCFQNTVLVWVPCIYLWVCFP--AYFLYLRSHDRGYIQMSILNK 72

Query:    67 SK 68
             +K
Sbjct:    73 AK 74

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

UNIPROTKB|Q5F364 ABCC1 "Multidrug resistance-associated protein 1" [Gallus gallus (taxid:9031)]

 Score = 172 (65.6 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%)

Query:     9 FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYL-VNSKFRD-IPWNLLNR 66
             FWD NLTW+T  P+ T CF++TVLVW PC++LWV  P  AY+L + S  R  I  ++LN+
Sbjct:    15 FWDWNLTWHTENPDFTQCFQNTVLVWVPCIYLWVCFP--AYFLYLRSHDRGYIQMSILNK 72

Query:    67 SK 68
             +K
Sbjct:    73 AK 74

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

MGI|MGI:1923658 Abcc3 "ATP-binding cassette, sub-family C (CFTR/MRP), member 3" [Mus musculus (taxid:10090)]

 Score = 168 (64.2 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 31/73 (42%), Positives = 45/73 (61%)

Query:     1 MDEFCGT-----KFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSK 55
             MD  CG+     KFWD NL+  TN P+LTPCF++++L W PC++LW   P   +YL + +
Sbjct:     1 MDRLCGSGELGSKFWDSNLSIYTNTPDLTPCFQNSLLAWVPCIYLWAALPCYLFYLRHHQ 60

Query:    56 FRDIPWNLLNRSK 68
                I  + L+R K
Sbjct:    61 LGYIVLSWLSRLK 73

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0006855 "drug transmembrane transport" evidence=ISO

GO:0008559 "xenobiotic-transporting ATPase activity" evidence=ISO

GO:0015238 "drug transmembrane transporter activity" evidence=ISO

GO:0015432 "bile acid-exporting ATPase activity" evidence=ISO

GO:0015722 "canalicular bile acid transport" evidence=ISO

GO:0015893 "drug transport" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0016887 "ATPase activity" evidence=IEA

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=ISO

GO:0055085 "transmembrane transport" evidence=IEA

ZFIN|ZDB-GENE-050517-18 abcc6a "ATP-binding cassette, sub-family C (CFTR/MRP), member 6a" [Danio rerio (taxid:7955)]

 Score = 166 (63.5 bits), Expect = 7.3e-11, P = 7.3e-11
 Identities = 32/73 (43%), Positives = 42/73 (57%)

Query:     1 MDEFCGTK----FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKF 56
             MD FC        WD N TW T+ PEL+ CF++TVLVW PC++LWV SP    +L     
Sbjct:     1 MDTFCSLSGLDPLWDWNQTWYTHRPELSNCFQNTVLVWAPCIYLWVLSPFYCLHLYCHGR 60

Query:    57 RDIPWNLLNRSKL 69
               +P + L  +KL
Sbjct:    61 GRLPLSSLCNAKL 73

GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

GO:0005215 "transporter activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016887 "ATPase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

UNIPROTKB|Q8HXQ5 ABCC1 "Multidrug resistance-associated protein 1" [Bos taurus (taxid:9913)]

 Score = 163 (62.4 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 30/70 (42%), Positives = 41/70 (58%)

Query:     3 EFCGTK----FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRD 58
             +FC       FW+ N+TWNT+ P+ T CF++TVLVW PC +LWV  P    YL +     
Sbjct:     5 DFCSVDGSDLFWEWNVTWNTSNPDFTKCFQNTVLVWVPCSYLWVCFPFYFLYLSHHDRGY 64

Query:    59 IPWNLLNRSK 68
             I    LN++K
Sbjct:    65 IQMTHLNKAK 74

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0042626 "ATPase activity, coupled to transmembrane movement of substances" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	80
TIGR00957	1522	TIGR00957, MRP_assoc_pro, multi drug resistance-as	4e-17

>gnl|CDD|188098 TIGR00957, MRP_assoc_pro, multi drug resistance-associated protein (MRP)

 Score = 73.4 bits (180), Expect = 4e-17
 Identities = 26/64 (40%), Positives = 35/64 (54%)

Query: 6  GTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLN 65
              WD N+TW+T+ P+ T CF++TVL W PC +LWV  P    YL       I    LN
Sbjct: 6  SDPLWDWNVTWHTSNPDFTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLN 65

Query: 66 RSKL 69
          ++K 
Sbjct: 66 KTKT 69

This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved [Transport and binding proteins, Other]. Length = 1522

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	80
TIGR00957	1522	MRP_assoc_pro multi drug resistance-associated pro	98.77
PLN03232	1495	ABC transporter C family member; Provisional	98.58
PLN03130	1622	ABC transporter C family member; Provisional	98.5

>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP)

Probab=98.77  E-value=7.8e-09  Score=89.22  Aligned_cols=65  Identities=40%  Similarity=0.871  Sum_probs=55.6

Q ss_pred             cccccCCCCCccCCCCCCcccchhheeehhhHHHHHHHHHHHHHHHHhcCCCCcCcchhhhhhhh
Q psy2810           6 GTKFWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVNSKFRDIPWNLLNRSKLD   70 (80)
Q Consensus         6 g~~fwd~~~~~~t~~Pdlt~CFq~TvLvwiPc~fLWi~~P~~~~~l~~s~~~~ip~s~L~~~K~v   70 (80)
                      |+++|+.+.++++..+|||+|||+++++|+|+.++++++|+.+++++++++++.+++.+...|++
T Consensus         6 ~~~~~~~~~~~~~~~~d~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~   70 (1522)
T TIGR00957         6 SDPLWDWNVTWHTSNPDFTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTA   70 (1522)
T ss_pred             CCCCCCCcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHH
Confidence            45689887778999999999999999999999999999999999997766666777777666653

This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.

>PLN03232 ABC transporter C family member; Provisional

Probab=98.58  E-value=4.1e-08  Score=84.69  Aligned_cols=64  Identities=11%  Similarity=0.196  Sum_probs=50.7

Q ss_pred             ccccccc---ccCCCCCccCCCCCCcccchhheeehhhHHHHHHHHHHHHHHH--HhcCCCCcCcchhhhhhh
Q psy2810           2 DEFCGTK---FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYL--VNSKFRDIPWNLLNRSKL   69 (80)
Q Consensus         2 ~~fCg~~---fwd~~~~~~t~~Pdlt~CFq~TvLvwiPc~fLWi~~P~~~~~l--~~s~~~~ip~s~L~~~K~   69 (80)
                      +.+||+.   ||++...++ ..| +|+|||+++++|+|++|+|+++|.+++++  ++++.++++.  .+..|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   75 (1495)
T PLN03232          7 NWYCKPIAEGFWEKTVDGA-FGA-YTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLR--KKYYNC   75 (1495)
T ss_pred             HhhcCCccccCCCcccccc-cCC-CCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCcccc--chHHHH
Confidence            4589654   687776666 788 99999999999999999999999999988  5555666665  555554

>PLN03130 ABC transporter C family member; Provisional

Probab=98.50  E-value=9.7e-08  Score=83.19  Aligned_cols=64  Identities=14%  Similarity=0.233  Sum_probs=51.0

Q ss_pred             ccccccc---ccCCCCCccCCCCCCcccchhheeehhhHHHHHHHHHHHHHHHHh--cCCCCcCcchhhhhhh
Q psy2810           2 DEFCGTK---FWDQNLTWNTNEPELTPCFESTVLVWTPCLFLWVFSPLEAYYLVN--SKFRDIPWNLLNRSKL   69 (80)
Q Consensus         2 ~~fCg~~---fwd~~~~~~t~~Pdlt~CFq~TvLvwiPc~fLWi~~P~~~~~l~~--s~~~~ip~s~L~~~K~   69 (80)
                      +.+||+.   ||++...++ ..| +|+|||+++++|+|++|+|+++|.++.++++  ++.++++.  .+..|+
T Consensus         7 ~~~c~~~~~~~~~~~~~~~-~~~-~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   75 (1622)
T PLN03130          7 DWYCRPVPNGVWAKKVDNA-FGA-YTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLR--SKWYNY   75 (1622)
T ss_pred             hhhcCCCccCCCCcccccc-cCC-CCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCcccc--chHHHH
Confidence            5689753   698776666 778 9999999999999999999999999998876  55556655  444444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00