Psyllid ID: psy2931

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-----
Protein Sequence
MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFRKELEEREREKDKTARIRAPESHANRKQKKGKKKRG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccc
Coil and Loop (DISEMBL)
mttaarptfeparggqgrgekDLSAISKqyssrdlpghtklkyrehgqgtneelRSRDFRKELEEREREKDktarirapeshanrkqkkgkkkrg
Flexible Loop (DISEMBL)
mttaarptfeparggqgrgekDLSAISKqyssrdlpghtklkyrehgqgtneelrsrdfrkeleererekdktarirapeshanrkqkkgkkkrg
Low Complexity Region (SEG)
MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFrkeleererekdkTARIRAPESHANrkqkkgkkkrg
Disordered region (IsUnstruct)
***********************************************************************************************
Disordered Region (DISOPRED)
*TTAARPTFEPA***********************************************************************************
Disordered Region (DISEMBL)
*********************DLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFRKE*************IRAP****************
Disordered Region (DISPRO)
*******************************SRDLPGHTKLKYREHGQGTNEELRSRDFRKELEEREREK*************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFRKELEEREREKDKTARIRAPESHANRKQKKGKKKRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	95	2.2.26 [Sep-21-2011]
Q9V3B6	259	Protein CWC15 homolog OS=	yes	N/A	0.621	0.227	0.864	3e-24
Q6IQU4	243	Protein CWC15 homolog OS=	yes	N/A	0.621	0.242	0.779	3e-21
Q0VFP5	227	Protein CWC15 homolog OS=	yes	N/A	0.621	0.259	0.762	5e-21
Q6DKE6	230	Protein CWC15 homolog B O	N/A	N/A	0.621	0.256	0.762	5e-21
Q6NUB2	228	Protein CWC15 homolog A O	N/A	N/A	0.621	0.258	0.762	1e-20
O45766	230	Protein CWC15 homolog OS=	yes	N/A	0.715	0.295	0.647	2e-20
Q2KJD3	231	Spliceosome-associated pr	yes	N/A	0.621	0.255	0.745	4e-20
Q5RE65	229	Spliceosome-associated pr	yes	N/A	0.621	0.257	0.745	4e-20
Q9P013	229	Spliceosome-associated pr	yes	N/A	0.621	0.257	0.745	4e-20
Q5BJP2	229	Spliceosome-associated pr	yes	N/A	0.621	0.257	0.745	4e-20

>sp|Q9V3B6|CWC15_DROME Protein CWC15 homolog OS=Drosophila melanogaster GN=c12.1 PE=2 SV=1

 Score =  110 bits (275), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 51/59 (86%), Positives = 56/59 (94%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT++E R+RDF
Sbjct: 1  MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDF 59

Involved in pre-mRNA splicing.
Drosophila melanogaster (taxid: 7227)

>sp|Q6IQU4|CWC15_DANRE Protein CWC15 homolog OS=Danio rerio GN=cwc15 PE=2 SV=1

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLSA+SKQYSSRDLPGHTK+KYR+  Q   EE+R+RDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSALSKQYSSRDLPGHTKIKYRQPTQDAPEEVRARDF 59

Involved in pre-mRNA splicing.

Danio rerio (taxid: 7955)

>sp|Q0VFP5|CWC15_XENTR Protein CWC15 homolog OS=Xenopus tropicalis GN=cwc15 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59

Involved in pre-mRNA splicing.

Xenopus tropicalis (taxid: 8364)

>sp|Q6DKE6|CW15B_XENLA Protein CWC15 homolog B OS=Xenopus laevis GN=cwc15-b PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct: 1  MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDF 59

Involved in pre-mRNA splicing.

Xenopus laevis (taxid: 8355)

>sp|Q6NUB2|CW15A_XENLA Protein CWC15 homolog A OS=Xenopus laevis GN=cwc15-a PE=2 SV=1

 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59

Involved in pre-mRNA splicing.

Xenopus laevis (taxid: 8355)

>sp|O45766|CWC15_CAEEL Protein CWC15 homolog OS=Caenorhabditis elegans GN=T10C6.5 PE=3 SV=1

 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 54/68 (79%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTA RPTF PARGG  RGE DLS +S QYSS+D+P HTK+KYR+ GQ T  +LR +D R
Sbjct: 1  MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKDLR 60

Query: 61 KELEERER 68
          +ELE++ER
Sbjct: 61 RELEDKER 68

Involved in pre-mRNA splicing.

Caenorhabditis elegans (taxid: 6239)

>sp|Q2KJD3|CWC15_BOVIN Spliceosome-associated protein CWC15 homolog OS=Bos taurus GN=CWC15 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

Involved in pre-mRNA splicing.

Bos taurus (taxid: 9913)

>sp|Q5RE65|CWC15_PONAB Spliceosome-associated protein CWC15 homolog OS=Pongo abelii GN=CWC15 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

Involved in pre-mRNA splicing.

Pongo abelii (taxid: 9601)

>sp|Q9P013|CWC15_HUMAN Spliceosome-associated protein CWC15 homolog OS=Homo sapiens GN=CWC15 PE=1 SV=2

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

Involved in pre-mRNA splicing.

Homo sapiens (taxid: 9606)

>sp|Q5BJP2|CWC15_RAT Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus GN=Cwc15 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
          MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct: 1  MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

Involved in pre-mRNA splicing.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
242007951	232	pre-mRNA-splicing factor cwc15, putative	0.789	0.323	0.88	1e-31
322790156	225	hypothetical protein SINV_06604 [Solenop	0.842	0.355	0.888	2e-31
332018699	225	Protein CWC15-like protein A [Acromyrmex	0.842	0.355	0.876	4e-31
307185553	225	Protein CWC15-like protein A [Camponotus	0.842	0.355	0.864	1e-30
389609409	217	conserved hypothetical protein [Papilio	0.726	0.317	0.913	7e-30
357612394	170	putative CWC15-like protein [Danaus plex	0.894	0.5	0.734	7e-29
195446944	253	GK25556 [Drosophila willistoni] gi|19416	0.726	0.272	0.884	7e-29
195134755	255	GI14379 [Drosophila mojavensis] gi|19390	0.726	0.270	0.884	8e-29
194769760	252	GF21803 [Drosophila ananassae] gi|190622	0.726	0.273	0.884	1e-28
195393770	256	GJ19417 [Drosophila virilis] gi|19415003	0.726	0.269	0.884	3e-28

>gi|242007951|ref|XP_002424778.1| pre-mRNA-splicing factor cwc15, putative [Pediculus humanus corporis] gi|212508301|gb|EEB12040.1| pre-mRNA-splicing factor cwc15, putative [Pediculus humanus corporis]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/75 (88%), Positives = 73/75 (97%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLP HTKLK+REHGQGT+EELRSRDFR
Sbjct: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPSHTKLKFREHGQGTSEELRSRDFR 60

Query: 61 KELEEREREKDKTAR 75
          +ELE+RE EK+K++R
Sbjct: 61 RELEDREHEKEKSSR 75

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322790156|gb|EFZ15164.1| hypothetical protein SINV_06604 [Solenopsis invicta]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/81 (88%), Positives = 74/81 (91%), Gaps = 1/81 (1%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLP HTKLKYREHGQGT EELR+RDFR
Sbjct: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPSHTKLKYREHGQGTVEELRNRDFR 60

Query: 61 KELEERER-EKDKTARIRAPE 80
          KELEERER EKDK +  RA E
Sbjct: 61 KELEERERTEKDKGSSRRAIE 81

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332018699|gb|EGI59271.1| Protein CWC15-like protein A [Acromyrmex echinatior]

 Score =  138 bits (348), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/81 (87%), Positives = 74/81 (91%), Gaps = 1/81 (1%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLP HTKLKYREHGQGT EELR+RDFR
Sbjct: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPSHTKLKYREHGQGTIEELRNRDFR 60

Query: 61 KELEERER-EKDKTARIRAPE 80
          KELEERER +KDK +  RA E
Sbjct: 61 KELEERERIDKDKGSSRRAIE 81

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307185553|gb|EFN71515.1| Protein CWC15-like protein A [Camponotus floridanus]

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/81 (86%), Positives = 74/81 (91%), Gaps = 1/81 (1%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLP HTKLKYRE+GQGT EELR+RDFR
Sbjct: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPSHTKLKYREYGQGTVEELRNRDFR 60

Query: 61 KELEERER-EKDKTARIRAPE 80
          KELE+RER EKDK +  RA E
Sbjct: 61 KELEDRERVEKDKGSSRRAIE 81

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|389609409|dbj|BAM18316.1| conserved hypothetical protein [Papilio xuthus]

 Score =  134 bits (337), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 63/69 (91%), Positives = 67/69 (97%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGGQGRGEKDLSAIS+QYSSRDLPGHTKLKYRE GQGT EELRSRDFR
Sbjct: 1  MTTAARPTFDPARGGQGRGEKDLSAISRQYSSRDLPGHTKLKYREQGQGTTEELRSRDFR 60

Query: 61 KELEERERE 69
          KEL+ERE+E
Sbjct: 61 KELDEREKE 69

Source: Papilio xuthus

Species: Papilio xuthus

Genus: Papilio

Family: Papilionidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357612394|gb|EHJ67963.1| putative CWC15-like protein [Danaus plexippus]

 Score =  131 bits (329), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/94 (73%), Positives = 76/94 (80%), Gaps = 9/94 (9%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGG GRGEKDLSAIS+QYSSRDLPGHTKLKYRE GQGT EELR+RDFR
Sbjct: 1  MTTAARPTFDPARGGTGRGEKDLSAISRQYSSRDLPGHTKLKYREQGQGTTEELRARDFR 60

Query: 61 KELEEREREKDKTARIRAPESHANRKQKKGKKKR 94
          KEL+ERE+E      I+ P S   RKQ +   KR
Sbjct: 61 KELDEREKE------IKGPSS---RKQVEPPVKR 85

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195446944|ref|XP_002070994.1| GK25556 [Drosophila willistoni] gi|194167079|gb|EDW81980.1| GK25556 [Drosophila willistoni]

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT+EE+R+RDFR
Sbjct: 1  MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSEEIRNRDFR 60

Query: 61 KELEERERE 69
          KELEERER+
Sbjct: 61 KELEERERD 69

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195134755|ref|XP_002011802.1| GI14379 [Drosophila mojavensis] gi|193909056|gb|EDW07923.1| GI14379 [Drosophila mojavensis]

 Score =  130 bits (328), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT+EE+R+RDFR
Sbjct: 1  MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYREIGQGTSEEIRNRDFR 60

Query: 61 KELEERERE 69
          KELEERER+
Sbjct: 61 KELEERERD 69

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194769760|ref|XP_001966969.1| GF21803 [Drosophila ananassae] gi|190622764|gb|EDV38288.1| GF21803 [Drosophila ananassae]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 67/69 (97%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT+EE+R+RDFR
Sbjct: 1  MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSEEIRNRDFR 60

Query: 61 KELEERERE 69
          KELEERER+
Sbjct: 61 KELEERERD 69

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195393770|ref|XP_002055526.1| GJ19417 [Drosophila virilis] gi|194150036|gb|EDW65727.1| GJ19417 [Drosophila virilis]

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 66/69 (95%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT+EE R+RDFR
Sbjct: 1  MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSEETRNRDFR 60

Query: 61 KELEERERE 69
          KELEERER+
Sbjct: 61 KELEERERD 69

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	95
FB|FBgn0040235	259	c12.1 "c12.1" [Drosophila mela	0.621	0.227	0.864	1.1e-23
ZFIN|ZDB-GENE-040625-10	244	zgc:86607 "zgc:86607" [Danio r	0.621	0.241	0.779	8e-21
UNIPROTKB|Q6DKE6	230	cwc15-b "Protein CWC15 homolog	0.621	0.256	0.762	3.5e-20
UNIPROTKB|Q0VFP5	227	cwc15 "Protein CWC15 homolog"	0.621	0.259	0.762	4.4e-20
UNIPROTKB|Q6NUB2	228	cwc15-a "Protein CWC15 homolog	0.621	0.258	0.762	5.7e-20
UNIPROTKB|E1C8V6	230	CWC15 "Uncharacterized protein	0.621	0.256	0.745	1.2e-19
UNIPROTKB|Q2KJD3	231	CWC15 "Spliceosome-associated	0.621	0.255	0.745	1.2e-19
UNIPROTKB|E2RQA3	231	CWC15 "Uncharacterized protein	0.621	0.255	0.745	1.2e-19
UNIPROTKB|Q9P013	229	CWC15 "Spliceosome-associated	0.621	0.257	0.745	1.2e-19
UNIPROTKB|F1STJ3	231	LOC100525240 "Uncharacterized	0.621	0.255	0.745	1.2e-19

FB|FBgn0040235 c12.1 "c12.1" [Drosophila melanogaster (taxid:7227)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 51/59 (86%), Positives = 56/59 (94%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT++E R+RDF
Sbjct:     1 MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDF 59

GO:0003674 "molecular_function" evidence=ND

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC

GO:0007052 "mitotic spindle organization" evidence=IMP

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0071011 "precatalytic spliceosome" evidence=IDA

ZFIN|ZDB-GENE-040625-10 zgc:86607 "zgc:86607" [Danio rerio (taxid:7955)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLSA+SKQYSSRDLPGHTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSALSKQYSSRDLPGHTKIKYRQPTQDAPEEVRARDF 59

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;ISS

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0003723 "RNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0008380 "RNA splicing" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

UNIPROTKB|Q6DKE6 cwc15-b "Protein CWC15 homolog B" [Xenopus laevis (taxid:8355)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct:     1 MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDF 59

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0003723 "RNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

UNIPROTKB|Q0VFP5 cwc15 "Protein CWC15 homolog" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0003723 "RNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

UNIPROTKB|Q6NUB2 cwc15-a "Protein CWC15 homolog A" [Xenopus laevis (taxid:8355)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 45/59 (76%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+RSRDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0003723 "RNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

UNIPROTKB|E1C8V6 CWC15 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRNRDF 59

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

GO:0005681 "spliceosomal complex" evidence=IEA

UNIPROTKB|Q2KJD3 CWC15 "Spliceosome-associated protein CWC15 homolog" [Bos taurus (taxid:9913)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0003723 "RNA binding" evidence=ISS

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

UNIPROTKB|E2RQA3 CWC15 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

UNIPROTKB|Q9P013 CWC15 "Spliceosome-associated protein CWC15 homolog" [Homo sapiens (taxid:9606)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

GO:0005634 "nucleus" evidence=IDA;NAS

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0005681 "spliceosomal complex" evidence=IDA

GO:0003723 "RNA binding" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|F1STJ3 LOC100525240 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query:     1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
             MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+  Q   EE+R+RDF
Sbjct:     1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O45766	CWC15_CAEEL	No assigned EC number	0.6470	0.7157	0.2956	yes	N/A
Q6IQU4	CWC15_DANRE	No assigned EC number	0.7796	0.6210	0.2427	yes	N/A
Q9P013	CWC15_HUMAN	No assigned EC number	0.7457	0.6210	0.2576	yes	N/A
P78794	CWC15_SCHPO	No assigned EC number	0.5079	0.6	0.2150	yes	N/A
Q5BJP2	CWC15_RAT	No assigned EC number	0.7457	0.6210	0.2576	yes	N/A
Q0VFP5	CWC15_XENTR	No assigned EC number	0.7627	0.6210	0.2599	yes	N/A
Q9JHS9	CWC15_MOUSE	No assigned EC number	0.7457	0.6210	0.2576	yes	N/A
Q2KJD3	CWC15_BOVIN	No assigned EC number	0.7457	0.6210	0.2554	yes	N/A
Q5RE65	CWC15_PONAB	No assigned EC number	0.7457	0.6210	0.2576	yes	N/A
Q9V3B6	CWC15_DROME	No assigned EC number	0.8644	0.6210	0.2277	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	95
pfam04889	241	pfam04889, Cwf_Cwc_15, Cwf15/Cwc15 cell cycle cont	3e-24

>gnl|CDD|218312 pfam04889, Cwf_Cwc_15, Cwf15/Cwc15 cell cycle control protein

 Score = 91.3 bits (227), Expect = 3e-24
 Identities = 46/69 (66%), Positives = 51/69 (73%)

Query: 1  MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR 60
          MTTA RPTF+PARG + +G   LS  S  YSSRDLP HTKLKYR+ GQGT +ELR RD R
Sbjct: 1  MTTAHRPTFDPARGKEEQGGNRLSGPSSIYSSRDLPAHTKLKYRQPGQGTEDELRKRDLR 60

Query: 61 KELEERERE 69
           ELEE ER 
Sbjct: 61 AELEEAERA 69

This family represents Cwf15/Cwc15 (from Schizosaccharomyces pombe and Saccharomyces cerevisiae respectively) and their homologues. The function of these proteins is unknown, but they form part of the spliceosome and are thus thought to be involved in mRNA splicing. Length = 241

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	95
PF04889	244	Cwf_Cwc_15: Cwf15/Cwc15 cell cycle control protein	100.0
KOG3228|consensus	226		99.97

>PF04889 Cwf_Cwc_15: Cwf15/Cwc15 cell cycle control protein; InterPro: IPR006973 This family represents Cwf15/Cwc15 (from Schizosaccharomyces pombe and Saccharomyces cerevisiae respectively) and their homologues

Probab=100.00  E-value=9.9e-34  Score=218.64  Aligned_cols=75  Identities=72%  Similarity=1.052  Sum_probs=73.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeeecCCCCChhHhhHHHHHHHHHHHHHHHHHHhh
Q psy2931           1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFRKELEEREREKDKTAR   75 (95)
Q Consensus         1 MTTAHRPT~~pA~G~~~~g~~~~~~~s~~~ssRdLP~HtkLK~Rq~gQ~~~~e~~~rDLr~ELe~~E~~~~~kkr   75 (95)
                      |||||||||+||+|+.++|+++++++|.|||+||||+||+||||++||++.+++..+|||+||+++|++++.++.
T Consensus         1 MTTAHRPT~~pA~G~~~~~~~~~~~~S~~~ssRdLPsHTkLK~Rq~gq~~~~e~~~rdlr~eLe~~E~~~~~kk~   75 (244)
T PF04889_consen    1 MTTAHRPTFEPARGGEGQGGNDLSVPSKQYSSRDLPSHTKLKYRQDGQGTEEELRKRDLRAELEEAEREHFAKKN   75 (244)
T ss_pred             CCCccCCCcccccCCcccCCccccccccccccccCCcCCeeeeecCCCCcchhHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999994

The function of these proteins is unknown, but they form part of the spliceosome and are thus thought to be involved in mRNA splicing [].; GO: 0000398 nuclear mRNA splicing, via spliceosome, 0005681 spliceosomal complex

>KOG3228|consensus

Probab=99.97  E-value=3.1e-31  Score=203.68  Aligned_cols=69  Identities=81%  Similarity=1.232  Sum_probs=68.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeeecCCCCChhHhhHHHHHHHHHHHHHH
Q psy2931           1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFRKELEERERE   69 (95)
Q Consensus         1 MTTAHRPT~~pA~G~~~~g~~~~~~~s~~~ssRdLP~HtkLK~Rq~gQ~~~~e~~~rDLr~ELe~~E~~   69 (95)
                      |||||||||+||+|+...|+.+++++|+|||+||||+||+|||||.||++.+|+..+|||+|||++|+.
T Consensus         1 MTTAhRPtf~parGg~~~g~~~ls~ls~qysSRdlP~HTklKyRq~~Q~teee~rk~dlR~eleerER~   69 (226)
T KOG3228|consen    1 MTTAHRPTFEPARGGSARGETDLSILSKQYSSRDLPGHTKLKYRQTGQGTEEELRKRDLRRELEERERA   69 (226)
T ss_pred             CCcccCCccCcccCccccCCCCcccccchhhhccCCcccccchhhcccccHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999999999999999999993

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00