Psyllid ID: psy29

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MVGLKVEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGGSSPSQLASDYLTEDEVKFKKPKKKVRKIRKTKLRADDLLNMDSGADQSSEMMKREVKSEPESPYRRSGSARVKDEPEDDDDRMELDVDDMEGSQNP
Secondary Structure (PSIPRED)
cccccccccccccccccEEEEccccccccccEEEEEEccccccccccccHHcccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHccccHHHHHHHHHcccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHccHHHHHcccEEEccHHHHccccEEEEEEEcccccccccccEEEEccccHHHHHHHHHHHHHcccccccccccccHHHHHccccccccHHHHHHHHHcccccccEEEEccccccHHHccccHHHHHHHcccHHHHHHcccccEEEEEEEEEEEHHHcccccccccccccccccccccccccccccccccccccccccccccEEEccccHHccccc
Coil and Loop (DISEMBL)
mvglkvehdikdftegrnvehdikdftegrnviltlkdqdilaedasdtlvnvnmvdderhkkNVLNRKqkvggkfgysaldedefdedgnpresqllskydeeiegtKKKSFAIARWTLnlkvggsspsqlasdyltedevkfkkpkkKVRKIRKTKlraddllnmdsgadqssemmkrevksepespyrrsgsarvkdepeddddrmeldvddmegsqnp
Flexible Loop (DISEMBL)
mvglkvehdikdftegrnvehdikdftegrnVILTLKDQDILAEDASDTLVnvnmvdderhkknvlnrkqkvggkfgysaldedefdedgnpresqllskydeeiegtkkKSFAIARWTlnlkvggsspsqlasdyltedevkfkkpkkkvrkirktklraddllnmdsgadqssemmkrevksepespyrrsgsarvkdepeddddrmeldvddmegsqnp
Low Complexity Region (SEG)
MVGLKVEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGGSSPSQLASDYLTEDEVkfkkpkkkvrkirktklrADDLLNMDSGADQSSEMMKREVKSEPESPYRRSGSARVKdepeddddrmeldvddmeGSQNP
Disordered region (IsUnstruct)
****************RNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMV*******************************************************SFAIARWTLNLKV**************************************************************************************************
Disordered Region (DISOPRED)
******E*DIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVD********************YSALDEDEFDEDGNPR*********************************************************************************************************************************
Disordered Region (DISEMBL)
MVGLKVEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGGSSPSQLASDYLTED*************IRKTKLRADDLLNMDSG**************************************MELD**********
Disordered Region (DISPRO)
MVGLKVEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGGSSPSQLASDYLTEDEVKFKKPKKKVRKIRKTKLRADDLLNM****************************************R***D**********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVGLKVEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGGSSPSQLASDYLTEDEVKFKKPKKKVRKIRKTKLRADDLLNMDSGADQSSEMMKREVKSEPESPYRRSGSARVKDEPEDDDDRMELDVDDMEGSQNP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
O43290	800	U4/U6.U5 tri-snRNP-associ	yes	N/A	0.666	0.185	0.412	1e-14
Q9Z315	806	U4/U6.U5 tri-snRNP-associ	yes	N/A	0.666	0.183	0.412	2e-14
Q5XIW8	806	U4/U6.U5 tri-snRNP-associ	yes	N/A	0.689	0.189	0.413	4e-14

>sp|O43290|SNUT1_HUMAN U4/U6.U5 tri-snRNP-associated protein 1 OS=Homo sapiens GN=SART1 PE=1 SV=1

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 99/177 (55%), Gaps = 29/177 (16%)

Query: 15  EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
           +G  VEH I  F EG  +ILTLKD+ +L E+  D LVNVN+VD ER +KNV  RK+K   
Sbjct: 255 QGLTVEHAIDSFREGETMILTLKDKGVLQEE-EDVLVNVNLVDKERAEKNVELRKKKP-- 311

Query: 75  KFGYSALDEDE-FDEDGNPRESQLLSKYDEEIEGTKKKSFAI------------------ 115
              Y    EDE  D+    +   +LSKYDEE+EG +  SF +                  
Sbjct: 312 --DYLPYAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRLEQGGTADGLRERELEEIR 369

Query: 116 ARWTLNLKVGGSSPSQLASDYLTEDE-VKFKKPKKKVRKIRKTK----LRADDLLNM 167
           A+  L  +   +   +LAS+YLT +E V FKK K++V+KIRK +    +RADDLL +
Sbjct: 370 AKLRLQAQSLSTVGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVVRADDLLPL 426

May play a role in mRNA splicing. May also bind to DNA.
Homo sapiens (taxid: 9606)

>sp|Q9Z315|SNUT1_MOUSE U4/U6.U5 tri-snRNP-associated protein 1 OS=Mus musculus GN=Sart1 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 29/177 (16%)

Query: 15  EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
           +G  VEH I  F EG  V+LTLKD+ +L +D  D LVNVNMVD ER  KNV  RK+K   
Sbjct: 255 QGLTVEHAIDSFREGETVVLTLKDKGVL-QDGEDVLVNVNMVDKERADKNVELRKKKP-- 311

Query: 75  KFGYSALDEDE-FDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWTL------------- 120
              Y    EDE  D+    +   +L+KYDEE+EG +  SF + +  +             
Sbjct: 312 --DYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGLRERELEEIR 369

Query: 121 -NLKVGGSSPS----QLASDYLTEDE-VKFKKPKKKVRKIRKTK----LRADDLLNM 167
             L++   S S    +LAS+YL+ +E V FKK K++V+KIRK +    +RADDLL +
Sbjct: 370 TKLRLQAQSLSSVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMRADDLLPL 426

May play a role in mRNA splicing. May also bind to DNA. Appears to play a role in hypoxia-induced regulation of EPO gene expression.

Mus musculus (taxid: 10090)

>sp|Q5XIW8|SNUT1_RAT U4/U6.U5 tri-snRNP-associated protein 1 OS=Rattus norvegicus GN=Sart1 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 101/184 (54%), Gaps = 31/184 (16%)

Query: 15  EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
           +G  VEH I  F EG  V+LTLKD+ +L E   D LVNVNMVD ER  KNV  RK+K   
Sbjct: 255 QGLTVEHAIDSFREGETVVLTLKDKGVLQE-GEDVLVNVNMVDKERADKNVELRKKKP-- 311

Query: 75  KFGYSALDEDE-FDEDGNPRESQLLSKYDEEIEGTKKKSFAI----------------AR 117
              Y    EDE  D+    +   +L+KYDEE+EG +  SF +                 R
Sbjct: 312 --DYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGLRERELEEIR 369

Query: 118 WTLNLKVGG--SSPSQLASDYLTEDE-VKFKKPKKKVRKIRKTK----LRADDLLNMDSG 170
             L L+     +   +LAS+YL+ +E V FKK K++V+KIRK +    +RADDLL +  G
Sbjct: 370 TKLRLQAQSLNTVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMRADDLLPL--G 427

Query: 171 ADQS 174
            DQ+
Sbjct: 428 EDQT 431

May play a role in mRNA splicing. May also bind to DNA.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
157126661	803	hypoxia associated factor [Aedes aegypti	0.783	0.216	0.490	5e-29
157105652	853	hypoxia associated factor [Aedes aegypti	0.783	0.203	0.490	7e-29
312371516	977	hypothetical protein AND_21994 [Anophele	0.671	0.152	0.523	5e-27
170046427	921	U4/U6.U5 tri-snRNP-associated protein 1	0.815	0.196	0.465	5e-25
195148492	945	GL19580 [Drosophila persimilis] gi|19410	0.445	0.104	0.592	3e-23
198474857	935	GA19780 [Drosophila pseudoobscura pseudo	0.445	0.105	0.592	3e-23
195387195	961	GJ17470 [Drosophila virilis] gi|19414874	0.445	0.103	0.582	2e-22
194765899	979	GF23360 [Drosophila ananassae] gi|190617	0.445	0.101	0.572	4e-22
195472255	970	GE12588 [Drosophila yakuba] gi|194174517	0.445	0.102	0.572	4e-22
195116921	935	GI17684 [Drosophila mojavensis] gi|19391	0.445	0.105	0.582	5e-22

>gi|157126661|ref|XP_001660934.1| hypoxia associated factor [Aedes aegypti] gi|108873170|gb|EAT37395.1| AAEL010600-PA [Aedes aegypti]

 Score =  133 bits (334), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/202 (49%), Positives = 121/202 (59%), Gaps = 28/202 (13%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD++ FTEGR VILTLKD D+L E+A DTLVNVNMVDDER+KKNV NRKQ     
Sbjct: 269 GLRVEHDVEAFTEGRQVILTLKDADVLDEEAGDTLVNVNMVDDERYKKNVKNRKQNPNS- 327

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIA----------------RWT 119
           +GY    +D+ DE G P+E  +L KY+EEI G KK SF I                 R  
Sbjct: 328 YGYDVYSQDDVDEFGMPKERDILGKYNEEIGGQKKSSFTIGSNAEYEAFEKRKQMEIRAK 387

Query: 120 LN---LKVGGSSPSQLASDYLTEDEV-KFKKPKKKVRKIRKTKLRADDLLNMDSGADQSS 175
           L    L+   + P  LAS++ TE E+  FKKPKKKVRKIR+ KLRADDLL     A  S 
Sbjct: 388 LQNKKLEALDTIPLTLASEFYTETEMASFKKPKKKVRKIRQ-KLRADDLLGSVPEASSSQ 446

Query: 176 EMMKREVK------SEPESPYR 191
           ++  R  +      +E ES +R
Sbjct: 447 DLGSRSSRRPAPTSTETESQFR 468

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157105652|ref|XP_001648964.1| hypoxia associated factor [Aedes aegypti] gi|108868974|gb|EAT33199.1| AAEL014540-PA [Aedes aegypti]

 Score =  132 bits (333), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/202 (49%), Positives = 121/202 (59%), Gaps = 28/202 (13%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD++ FTEGR VILTLKD D+L E+A DTLVNVNMVDDER+KKNV NRKQ     
Sbjct: 319 GLRVEHDVEAFTEGRQVILTLKDADVLDEEAGDTLVNVNMVDDERYKKNVENRKQNPNS- 377

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIA----------------RWT 119
           +GY    +D+ DE G P+E  +L KY+EEI G KK SF I                 R  
Sbjct: 378 YGYDVYSQDDVDEFGMPKERDILGKYNEEIGGQKKSSFTIGSNAEYEAFEKRRQMEIRAK 437

Query: 120 LN---LKVGGSSPSQLASDYLTEDEV-KFKKPKKKVRKIRKTKLRADDLLNMDSGADQSS 175
           L    L+   + P  LAS++ TE E+  FKKPKKKVRKIR+ KLRADDLL     A  S 
Sbjct: 438 LQNKKLEALDTIPLTLASEFYTETEMASFKKPKKKVRKIRQ-KLRADDLLGSVPEASSSQ 496

Query: 176 EMMKREVK------SEPESPYR 191
           ++  R  +      +E ES +R
Sbjct: 497 DLGSRSSRRPAPTSTETESQFR 518

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312371516|gb|EFR19682.1| hypothetical protein AND_21994 [Anopheles darlingi]

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 110/172 (63%), Gaps = 23/172 (13%)

Query: 15  EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
           EG  VEHD++ FTEGR VILTLKD D+L E A DTLVNVNM+DDER+K+NV NRK     
Sbjct: 408 EGLRVEHDVEAFTEGRQVILTLKDADVLDEGAGDTLVNVNMMDDERYKRNVENRKANP-Q 466

Query: 75  KFGYSALDEDEFDEDGNPRESQLLSKYDEEIE-GTKKKSFAIA----------RWTLNLK 123
            +GY    +DE DE G P++ ++L KY EEI+ G +K SF I           R  L +K
Sbjct: 467 HYGYDVYCQDEVDEFGMPKQREVLGKYSEEIDGGPRKSSFVIGSNAEEEAREKRRLLEIK 526

Query: 124 VG---------GSSPSQLASDYLTEDEV-KFKKPKKKVRKIRKTKLRADDLL 165
                       ++P+ L SDY TE E+  FKKPKKKVRKIR+ KLRADDLL
Sbjct: 527 SKLDRKKLDSLVTAPATLVSDYFTETELASFKKPKKKVRKIRQ-KLRADDLL 577

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170046427|ref|XP_001850767.1| U4/U6.U5 tri-snRNP-associated protein 1 [Culex quinquefasciatus] gi|167869190|gb|EDS32573.1| U4/U6.U5 tri-snRNP-associated protein 1 [Culex quinquefasciatus]

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/204 (46%), Positives = 120/204 (58%), Gaps = 23/204 (11%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD+++F EGR VILTLKD D+L E+A DTLVNVNM+DDER+KKNV NRKQ     
Sbjct: 388 GLRVEHDVEEFKEGRQVILTLKDADVLDEEAGDTLVNVNMMDDERYKKNVENRKQNP-NH 446

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIA----------RWTLNLKVG 125
           +GY+  DE E DE G  +E  +L KY++E+   KK SF I           R  L ++  
Sbjct: 447 YGYNVYDE-EVDEFGMVKERDILGKYNDELGERKKSSFTIGSNAEHEAAEKRRQLEIRAK 505

Query: 126 ---------GSSPSQLASDYLTEDEV-KFKKPKKKVRKIRKTKLRADDLLNMDSGADQSS 175
                     + P  LAS+Y  E E+  FKKPKKKVRKIR+ KLRADDLL     A  S+
Sbjct: 506 LQNKKLDSLNTVPLALASEYFNETEIASFKKPKKKVRKIRQ-KLRADDLLASVPEAASSA 564

Query: 176 EMMKREVKSEPESPYRRSGSARVK 199
           ++  R  +   E P  +S    VK
Sbjct: 565 DLGSRANRRGGEPPPTKSEIRNVK 588

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195148492|ref|XP_002015208.1| GL19580 [Drosophila persimilis] gi|194107161|gb|EDW29204.1| GL19580 [Drosophila persimilis]

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD+ DF EGR VILTLKDQD+L E+  DTLVNVNM+DDER+KKNV+N+KQ     
Sbjct: 416 GLRVEHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMLDDERYKKNVVNKKQNPLS- 474

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGT--KKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYDE+IEG   K+K+F I 
Sbjct: 475 YGYNVY-EEQYDELGNPIERSVLEKYDEDIEGQPKKRKNFVIG 516

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198474857|ref|XP_001356840.2| GA19780 [Drosophila pseudoobscura pseudoobscura] gi|198138578|gb|EAL33906.2| GA19780 [Drosophila pseudoobscura pseudoobscura]

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 77/103 (74%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD+ DF EGR VILTLKDQD+L E+  DTLVNVNM+DDER+KKNV+N+KQ     
Sbjct: 406 GLRVEHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMLDDERYKKNVVNKKQNPLS- 464

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGT--KKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYDE+IEG   K+K+F I 
Sbjct: 465 YGYNVY-EEQYDELGNPIERSVLEKYDEDIEGQPKKRKNFVIG 506

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195387195|ref|XP_002052285.1| GJ17470 [Drosophila virilis] gi|194148742|gb|EDW64440.1| GJ17470 [Drosophila virilis]

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD+ DF EGR VILTLKDQD+L E+  DTLVNVNM+DDER+KKNV N+K      
Sbjct: 430 GLRVEHDVDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMIDDERYKKNVANKKLNPLS- 488

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEG--TKKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYDE+IEG   K+K+F I 
Sbjct: 489 YGYNVY-EEQYDELGNPIERAILEKYDEDIEGQPQKRKNFLIG 530

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194765899|ref|XP_001965063.1| GF23360 [Drosophila ananassae] gi|190617673|gb|EDV33197.1| GF23360 [Drosophila ananassae]

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  V+HD+ DF EGR VILTLKDQD+L E+  DTLVNVNM+D+ER+KKNV N+KQ     
Sbjct: 454 GLRVDHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMLDEERYKKNVANKKQNPLS- 512

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGT--KKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYD+EIEG   K+K+F I 
Sbjct: 513 YGYNVY-EEQYDELGNPIERSVLEKYDDEIEGQPKKRKNFVIG 554

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195472255|ref|XP_002088416.1| GE12588 [Drosophila yakuba] gi|194174517|gb|EDW88128.1| GE12588 [Drosophila yakuba]

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/103 (57%), Positives = 76/103 (73%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  V+HD+ DF EGR VILTLKDQD+L E+  DTLVNVNMVD+ER+KKNV N+KQ     
Sbjct: 442 GLRVDHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMVDEERYKKNVANKKQNPLS- 500

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEGT--KKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYD+E+EG   K+K+F I 
Sbjct: 501 YGYNVY-EEQYDELGNPIERSVLEKYDDEMEGQPKKRKNFVIG 542

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195116921|ref|XP_002003000.1| GI17684 [Drosophila mojavensis] gi|193913575|gb|EDW12442.1| GI17684 [Drosophila mojavensis]

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 75/103 (72%), Gaps = 4/103 (3%)

Query: 16  GRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGK 75
           G  VEHD+ DF EGR VILTLKDQD+L E+  DTLVNVNM+DDER+KKNV N+K      
Sbjct: 406 GLRVEHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMLDDERYKKNVSNKKLNPLS- 464

Query: 76  FGYSALDEDEFDEDGNPRESQLLSKYDEEIEG--TKKKSFAIA 116
           +GY+   E+++DE GNP E  +L KYDE+IEG   K+K+F I 
Sbjct: 465 YGYNVY-EEQYDELGNPIERAILEKYDEDIEGKPQKRKNFVIG 506

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
FB|FBgn0032388	970	CG6686 [Drosophila melanogaste	0.445	0.102	0.572	2.4e-24
ZFIN|ZDB-GENE-040718-422	777	sart1 "squamous cell carcinoma	0.509	0.145	0.404	1.6e-15
MGI|MGI:1309453	806	Sart1 "squamous cell carcinoma	0.432	0.119	0.470	3.6e-15
UNIPROTKB|F1RU31	803	SART1 "Uncharacterized protein	0.432	0.119	0.470	4.6e-15
UNIPROTKB|O43290	800	SART1 "U4/U6.U5 tri-snRNP-asso	0.432	0.12	0.470	5.8e-15
UNIPROTKB|F1MZ21	802	SART1 "Uncharacterized protein	0.432	0.119	0.470	5.9e-15
RGD|61930	806	Sart1 "squamous cell carcinoma	0.432	0.119	0.470	9.7e-15
WB|WBGene00017605	829	F19F10.9 [Caenorhabditis elega	0.427	0.114	0.411	1e-11
UNIPROTKB|G4NCF8	644	MGG_01095 "Uncharacterized pro	0.436	0.150	0.318	9.5e-06
DICTYBASE|DDB_G0281621	688	DDB_G0281621 "putative U4/U6.U	0.391	0.126	0.326	2e-05

FB|FBgn0032388 CG6686 [Drosophila melanogaster (taxid:7227)]

 Score = 290 (107.1 bits), Expect = 2.4e-24, P = 2.4e-24
 Identities = 59/103 (57%), Positives = 77/103 (74%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  V+HD+ DF EGR VILTLKDQD+L E+  DTLVNVNMVD+ER+KKNV N+KQ    
Sbjct:   441 KGLRVDHDMDDFGEGRTVILTLKDQDVLNEEEGDTLVNVNMVDEERYKKNVANKKQNPLS 500

Query:    75 KFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGT--KKKSFAI 115
              +GY+  +E ++DE GNP E  +L KYD+E+EG   K+K+F I
Sbjct:   501 -YGYNVYEE-QYDELGNPIERSVLEKYDDEMEGQPKKRKNFVI 541

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0071011 "precatalytic spliceosome" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-040718-422 sart1 "squamous cell carcinoma antigen recognised by T cells" [Danio rerio (taxid:7955)]

 Score = 206 (77.6 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 51/126 (40%), Positives = 76/126 (60%)

Query:     8 HDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLN 67
             HD+K    G  V+H ++ F+EG+ V+LTL+D+ +L E+  D LVNV ++D E+ +KNV  
Sbjct:   232 HDLK----GLKVQHKVESFSEGQTVVLTLQDKGVLEEE-EDVLVNVGLIDKEKAEKNVEL 286

Query:    68 RKQKVGGKFGYSALDEDEFDEDGNP-RESQLLSKYDEEIEGTKKKSFAIARWTLNLKVGG 126
             +K+K      Y   +E+E  +D    +   +LSKYDEEIEG KKKSF ++       VGG
Sbjct:   287 KKKKPD----YKPYEEEESVDDMIVFKPKSVLSKYDEEIEGEKKKSFRLSSGGF---VGG 339

Query:   127 SSPSQL 132
                 +L
Sbjct:   340 EREREL 345

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1309453 Sart1 "squamous cell carcinoma antigen recognized by T cells 1" [Mus musculus (taxid:10090)]

 Score = 203 (76.5 bits), Expect = 3.6e-15, P = 3.6e-15
 Identities = 48/102 (47%), Positives = 61/102 (59%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  VEH I  F EG  V+LTLKD+ +L +D  D LVNVNMVD ER  KNV  RK+K   
Sbjct:   255 QGLTVEHAIDSFREGETVVLTLKDKGVL-QDGEDVLVNVNMVDKERADKNVELRKKKPD- 312

Query:    75 KFGYSALDEDEFDED-GNPRESQLLSKYDEEIEGTKKKSFAI 115
                Y    EDE  +D    +   +L+KYDEE+EG +  SF +
Sbjct:   313 ---YLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRL 351

GO:0005634 "nucleus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005681 "spliceosomal complex" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0015030 "Cajal body" evidence=ISO

GO:0045585 "positive regulation of cytotoxic T cell differentiation" evidence=ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=ISO

UNIPROTKB|F1RU31 SART1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 202 (76.2 bits), Expect = 4.6e-15, P = 4.6e-15
 Identities = 48/102 (47%), Positives = 64/102 (62%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  VEH I  F EG  VILTLKD+ +L E+  D LVNVN++D ER +KNV  RK+K   
Sbjct:   255 QGLTVEHAIDAFREGETVILTLKDKGVLQEE-EDVLVNVNLLDKERAEKNVELRKRKPD- 312

Query:    75 KFGYSALDEDEFDED-GNPRESQLLSKYDEEIEGTKKKSFAI 115
                YS   E+E  +D    +   +LSKYDEE+EG + +SF +
Sbjct:   313 ---YSPYAENESVDDLAQQKPRSILSKYDEELEGERPQSFRL 351

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0045585 "positive regulation of cytotoxic T cell differentiation" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|O43290 SART1 "U4/U6.U5 tri-snRNP-associated protein 1" [Homo sapiens (taxid:9606)]

 Score = 201 (75.8 bits), Expect = 5.8e-15, P = 5.8e-15
 Identities = 48/102 (47%), Positives = 62/102 (60%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  VEH I  F EG  +ILTLKD+ +L E+  D LVNVN+VD ER +KNV  RK+K   
Sbjct:   255 QGLTVEHAIDSFREGETMILTLKDKGVLQEE-EDVLVNVNLVDKERAEKNVELRKKKPD- 312

Query:    75 KFGYSALDEDEFDED-GNPRESQLLSKYDEEIEGTKKKSFAI 115
                Y    EDE  +D    +   +LSKYDEE+EG +  SF +
Sbjct:   313 ---YLPYAEDESVDDLAQQKPRSILSKYDEELEGERPHSFRL 351

GO:0045585 "positive regulation of cytotoxic T cell differentiation" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0007050 "cell cycle arrest" evidence=NAS

GO:0097193 "intrinsic apoptotic signaling pathway" evidence=NAS

GO:0003674 "molecular_function" evidence=ND

GO:0071013 "catalytic step 2 spliceosome" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=IC

GO:0005737 "cytoplasm" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0000387 "spliceosomal snRNP assembly" evidence=TAS

GO:0005654 "nucleoplasm" evidence=IDA

GO:0015030 "Cajal body" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

UNIPROTKB|F1MZ21 SART1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 201 (75.8 bits), Expect = 5.9e-15, P = 5.9e-15
 Identities = 48/102 (47%), Positives = 63/102 (61%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  VEH I  F EG  VILTLKD+ +L E+  D LVNVN++D ER +KNV  RK+K   
Sbjct:   255 QGLTVEHAIDSFREGETVILTLKDKGVLQEE-EDVLVNVNLLDKERAEKNVELRKKKPD- 312

Query:    75 KFGYSALDEDEFDED-GNPRESQLLSKYDEEIEGTKKKSFAI 115
                Y    EDE  +D    +   +LSKYDEE+EG + +SF +
Sbjct:   313 ---YLPYVEDESVDDLAQHKPRSILSKYDEELEGERPQSFRL 351

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA

GO:0045585 "positive regulation of cytotoxic T cell differentiation" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

RGD|61930 Sart1 "squamous cell carcinoma antigen recognized by T cells" [Rattus norvegicus (taxid:10116)]

 Score = 199 (75.1 bits), Expect = 9.7e-15, P = 9.7e-15
 Identities = 48/102 (47%), Positives = 60/102 (58%)

Query:    15 EGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGG 74
             +G  VEH I  F EG  V+LTLKD+ +L E   D LVNVNMVD ER  KNV  RK+K   
Sbjct:   255 QGLTVEHAIDSFREGETVVLTLKDKGVLQE-GEDVLVNVNMVDKERADKNVELRKKKPD- 312

Query:    75 KFGYSALDEDEFDED-GNPRESQLLSKYDEEIEGTKKKSFAI 115
                Y    EDE  +D    +   +L+KYDEE+EG +  SF +
Sbjct:   313 ---YLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRL 351

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA;ISO

GO:0045585 "positive regulation of cytotoxic T cell differentiation" evidence=IEA;ISO

GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

WB|WBGene00017605 F19F10.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 171 (65.3 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 42/102 (41%), Positives = 62/102 (60%)

Query:    14 TEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVG 73
             T G  + H  + F EG + IL L+D+ +L +D  + LVN N++D+ERH +NV  RK+K  
Sbjct:   199 TAGMVIGHGREAFIEG-DQILVLQDKGVL-DDGDEVLVNPNLLDNERHVRNVELRKRKDP 256

Query:    74 GKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAI 115
              +      DED  DE GN +   +L+KYDE +EG +KK F +
Sbjct:   257 NR----NFDED-VDEFGNAKNFGVLAKYDETLEGEQKKQFRL 293

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0040020 "regulation of meiosis" evidence=IMP

GO:0007281 "germ cell development" evidence=IMP

UNIPROTKB|G4NCF8 MGG_01095 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 125 (49.1 bits), Expect = 9.5e-06, P = 9.5e-06
 Identities = 35/110 (31%), Positives = 56/110 (50%)

Query:     7 EHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILA-EDASDTLVNVNMVDDERHKKNV 65
             EH  +D   G  V HD+    E    +LTLKD  +L  ED  D L N+++   E+  + +
Sbjct:   138 EHSARDLA-GVKVGHDMSALLEDGEQVLTLKDTTVLENEDEGDELENIDLRAQEKLDERL 196

Query:    66 LNRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAI 115
               +K+K          D ++FD+ G   E  +L +YD++  G KKK+F +
Sbjct:   197 QLKKKK-------PVYDPNDFDDTG---ERSILEQYDDDY-GKKKKAFTL 235

GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005681 "spliceosomal complex" evidence=ISS

GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=ISS

DICTYBASE|DDB_G0281621 DDB_G0281621 "putative U4/U6.U5 small nuclear ribonucleoparticle-associated protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
 Identities = 32/98 (32%), Positives = 54/98 (55%)

Query:     7 EHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVL 66
             +H  +   +G  V +DIK F +    ILTL+D  +L ED+ D L+NVN+ + E+ +K + 
Sbjct:   129 QHYNQSNLKGMKVGNDIKYFEDENEHILTLQDSSVL-EDSEDVLINVNLTEKEKREKQLQ 187

Query:    67 NRKQKVGGKFGYSALDEDEFDEDGNPRESQLLSKYDEE 104
             + K+K   KF       D +D+ G   +  +LS Y ++
Sbjct:   188 SNKKK--SKF-------DRYDDFGE-HKGGILSDYSDD 215

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005829 "cytosol" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	222
pfam03343	603	pfam03343, SART-1, SART-1 family	2e-21

>gnl|CDD|217502 pfam03343, SART-1, SART-1 family

 Score = 91.4 bits (227), Expect = 2e-21
 Identities = 71/218 (32%), Positives = 98/218 (44%), Gaps = 34/218 (15%)

Query: 19  VEHDIKDFTEGRNVILTLKDQDIL-AEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFG 77
           V H +++F EG +VILTLKD  +L  ED  D L NV +V+ E+ KKN+  +K+K      
Sbjct: 136 VGHKVEEFEEGEDVILTLKDTGVLEDEDEGDELENVELVEKEKDKKNLELKKKK------ 189

Query: 78  YSALDEDEFDEDGNPRESQLLSKYDEEIEGTKKKSFAIARWT------------------ 119
                + + D+D    +  +LSKYDEEIEG KKKS  +                      
Sbjct: 190 ----PDYDPDDDDKFNKRSILSKYDEEIEGKKKKSDNLFTLDSGGSTDDEAEKKRQEVKK 245

Query: 120 ----LNLKVGGSSPSQLASDYLTEDE-VKFKKPKKKVRKIRKTKLRADDLLNMDSGADQS 174
                N+ +   S    ASDY    E VKFKKPKKK +K +K +   D+           
Sbjct: 246 KLKINNVSLDDDSTETPASDYYDVSEMVKFKKPKKKKKKKKKRRKDLDEDELEPEAEGLG 305

Query: 175 SEMMKREVKSEPESPYRRSGSARVKDEPEDDDDRMELD 212
           S         E E+        + K+E EDDD   + D
Sbjct: 306 SSDSGSRKDVEEENARLEDSPKKRKEEQEDDDFVEDDD 343

SART-1 is a protein involved in cell cycle arrest and pre-mRNA splicing. It has been shown to be a component of U4/U6 x U5 tri-snRNP complex in human, Schizosaccharomyces pombe and Saccharomyces cerevisiae. SART-1 is a known tumour antigen in a range of cancers recognised by T cells. Length = 603

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
PF03343	613	SART-1: SART-1 family; InterPro: IPR005011 This fa	100.0
KOG2217|consensus	705		99.97

>PF03343 SART-1: SART-1 family; InterPro: IPR005011 This family of proteins appear to contain a leucine zipper [] and may therefore be a family of transcription factors

Probab=100.00  E-value=1.8e-37  Score=299.26  Aligned_cols=166  Identities=47%  Similarity=0.669  Sum_probs=0.0

Q ss_pred             cccccccCCCCceeeecccccCCCCcEEEEeecccccccCCC-CeeeccccchHHHHHHHHHHhhhcCCCCCCCCCCCcc
Q psy29             6 VEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDAS-DTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDED   84 (222)
Q Consensus         6 ~~yt~~d~L~GlkV~H~~~~f~eG~~vILTLKD~~ILde~e~-D~LeNv~L~e~ek~kknle~kkkk~~~~~~Y~~ydDe   84 (222)
                      ..|++.+ |+||||+|++++|.+|++|||||||++||+++++ |+||||+|++++++++|+++|++++    .|++++  
T Consensus       132 ~~y~~~d-L~glkV~H~~~~f~eg~~vILTLKD~~VLdd~~~~D~LeNv~l~e~ek~kknle~kkk~~----~~d~~e--  204 (613)
T PF03343_consen  132 KEYTSKD-LAGLKVAHDLDEFEEGEEVILTLKDSSVLDDDDEGDVLENVNLAEDEKRKKNLELKKKKK----GYDPDE--  204 (613)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccc-CCCCeeecchhhhccCCCeEEEeCCCCcCcCCCCCCEEechhhHHHHHHHHHHHHhccCc----cccccc--
Confidence            3577777 9999999999999999999999999999998854 9999999999999999999999999    566554  


Q ss_pred             ccccCCCccccccccCcccccccccccc---eEechh------------hhhhhcc------C--CCCCCcCCCCCCccc
Q psy29            85 EFDEDGNPRESQLLSKYDEEIEGTKKKS---FAIARW------------TLNLKVG------G--SSPSQLASDYLTEDE  141 (222)
Q Consensus        85 efDe~G~~k~k~iL~KYDEEieg~k~~~---F~Lg~~------------~lkk~l~------~--~~~~~~aSDY~t~eE  141 (222)
                       |   +.+..++||+|||++|+|++...   |+|+..            .++.++.      .  +....++|||||++|
T Consensus       205 -~---~~~~~k~iL~kYDeeie~~~~~~~~~f~L~~~g~~~~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~~sDy~t~~E  280 (613)
T PF03343_consen  205 -D---GNGKKKSILSKYDEEIEGEKKKSDNSFTLDEGGSVDDEKEKKEQEIKEKLKLSSLSLDSLDSKEKIASDYYTEEE  280 (613)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -c---cccCCCCccccCcccccCcccccccceEecCCCcchHHHHHHHhhHHHHHhhccccccccCCcccccccccCccc
Confidence             2   44457899999999999998777   999753            1222221      1  356789999999999


Q ss_pred             c-cccCCCcccchhhhcccccccccCCC-CCCCCCCCcccccc
Q psy29           142 V-KFKKPKKKVRKIRKTKLRADDLLNMD-SGADQSSEMMKREV  182 (222)
Q Consensus       142 m-kFKKpKKKkkk~Rkk~~~~ddL~~~~-~~~~~~~D~GsR~~  182 (222)
                      | +|||||||+++.+++....|++.+++ +.+.+++++|||..
T Consensus       281 m~kfKK~KkKk~kk~~r~~~~D~~~~~~~~~~~~~~~~~sr~~  323 (613)
T PF03343_consen  281 MIKFKKPKKKKKKKKKRKKKADDLELEPEEAASGSSDSGSRKM  323 (613)
T ss_dssp             -------------------------------------------
T ss_pred             cccccccccccchhhhhhhhhhccccccccccccccccccccc
Confidence            8 99999999855444433445555544 67889999999976

; PDB: 3PLV_C 3PLU_D.

>KOG2217|consensus

Probab=99.97  E-value=7e-32  Score=263.39  Aligned_cols=167  Identities=40%  Similarity=0.589  Sum_probs=143.2

Q ss_pred             ccccCCCCceeeecccccCCCCcEEEEeecccccccCCCCeeeccccchHHHHHHHHHHhhhcCCCCCCCCCCCcccccc
Q psy29             9 DIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLVNVNMVDDERHKKNVLNRKQKVGGKFGYSALDEDEFDE   88 (222)
Q Consensus         9 t~~d~L~GlkV~H~~~~f~eG~~vILTLKD~~ILde~e~D~LeNv~L~e~ek~kknle~kkkk~~~~~~Y~~ydDeefDe   88 (222)
                      +...+|+||+|+|+++.|.+|.+|||||||++||+|+  |  + |||++.++..+|++++++++    .|-+|-++-+|+
T Consensus       186 ~~~sdL~G~kV~Hg~e~f~eg~~~ILTLKD~~VLdd~--d--v-~n~~D~lenvk~ve~kkrne----~~~~~~~e~ydD  256 (705)
T KOG2217|consen  186 YGNSDLHGVKVSHGIEAFSEGKDVILTLKDQSVLDDG--D--V-VNLVDVLENVKNVELKKRNE----KYELYPDEMYDD  256 (705)
T ss_pred             CCCcccccceeecchhhhccCCceEEEeccccccccc--c--c-hhhHHHHHHHHHHHHhccCc----hhcccccccchh
Confidence            4455699999999999999999999999999999998  4  4 99999999999999999998    566653344788


Q ss_pred             CCCccccccccCcccccccccccceEechh------------hhhhhcc-------CCCCCCcCCCCCCcccc-cccCCC
Q psy29            89 DGNPRESQLLSKYDEEIEGTKKKSFAIARW------------TLNLKVG-------GSSPSQLASDYLTEDEV-KFKKPK  148 (222)
Q Consensus        89 ~G~~k~k~iL~KYDEEieg~k~~~F~Lg~~------------~lkk~l~-------~~~~~~~aSDY~t~eEm-kFKKpK  148 (222)
                      +|+++++++|++||++.+|+..++|+|...            .++.++.       ......++|+||+++|| +|||||
T Consensus       257 ~~n~k~~s~l~k~dee~E~e~~k~~~l~~~g~id~e~ekkl~e~r~ki~gk~~~~~e~~n~~las~~~S~eem~kFkk~K  336 (705)
T KOG2217|consen  257 LGNKKPRSELSKYDEELEGEGKKQFRLTTHGTIDGEREKKLEEIRNKIAGKTLTGLEDVNYRLASDYYSQEEMGKFKKPK  336 (705)
T ss_pred             hccccchhhhccCChhhhcccCcceeeecccccchhhHHHHHHHHHHhccCCccchhhcCHHHhhhhcCHHHhhcccchh
Confidence            999999999999999999999999998864            2344443       34456889999999999 999999


Q ss_pred             cccchhhhcccccccccCCC-CCCCCCCCcccccccCC
Q psy29           149 KKVRKIRKTKLRADDLLNMD-SGADQSSEMMKREVKSE  185 (222)
Q Consensus       149 KKkkk~Rkk~~~~ddL~~~~-~~~~~~~D~GsR~~~~~  185 (222)
                      | +|++|++.+++.||.|++ +.+.+.+|||||.+.+.
T Consensus       337 k-~kklrkk~l~asdl~~~~~~~~~~~~Dlgsr~~gr~  373 (705)
T KOG2217|consen  337 K-KKKLRKKNLRASDLRPLAIGDGMEISDLGSRDSGRR  373 (705)
T ss_pred             H-Hhhhhcccccccccchhhcccccccccccccccchh
Confidence            9 689999989999999986 78999999999776443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 2e-07
 Identities = 30/253 (11%), Positives = 80/253 (31%), Gaps = 65/253 (25%)

Query: 6   VEHDIKDFTEGRNVEHDIKDFTEGRNVILTLKDQDILAEDASDTLV----------NVNM 55
           +      F +  + + D++D    ++++   +   I+    + +               M
Sbjct: 22  LSVFEDAFVDNFDCK-DVQDMP--KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM 78

Query: 56  VD---DERHKKN---VLNRKQKVGGKFGYSALDEDEFDEDGNP--RESQLLSKYDEEIEG 107
           V    +E  + N   +++  +    +    ++    + E  +    ++Q+ +KY+     
Sbjct: 79  VQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTRMYIEQRDRLYNDNQVFAKYNVSRL- 134

Query: 108 TKKKSFAIARWTLNLK---------VGGSSPSQLASDYLTEDEVKFKKPKK----KVRKI 154
             +    + +  L L+         V GS  + +A D     +V+ K   K     ++  
Sbjct: 135 --QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 155 RKTKLRADDLLNMDSGADQSSEMMKREVKSEPESPYRRSGSARVKDEPEDDDDRME---- 210
                  + +L M         + K   + +P    R   S+ +K         +     
Sbjct: 193 N----SPETVLEM---------LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239

Query: 211 --------LDVDD 215
                   L + +
Sbjct: 240 SKPYENCLLVLLN 252

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00