Psyllid ID: psy3095


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
MEVKVQPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
ccEEccccccccccccccccccccccccccccccccccEEEEccHHHHHcccccccccccccccccccEEEccccccccccccccccccccEEEEcccEEEEEEEc
ccEEEcccccccccccccccccccccccHcccccccHHEEEEcccHHHHccccccccHHHHHHHcccEEEEEccccccccHcccccccHHHcccccEEEEEEEEEc
mevkvqphyegpfpcdlsqarsplppnnvnqlrpgdidivgaigdsitagngivatnpsqvntenrglswsvgknfgparrrpanhyQVELISHTCQVYLIVCVLI
mevkvqphyeGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATnpsqvntenrglSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
MEVKVQPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
**********************************GDIDIVGAIGDSITAGNGIVATN********RGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVL*
***********PFPC*L*************QLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
********YEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
*EVKVQPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEVKVQPHYEGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRRPANHYQVELISHTCQVYLIVCVLI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query106 2.2.26 [Sep-21-2011]
Q3TTY0 1478 Phospholipase B1, membran yes N/A 0.452 0.032 0.62 7e-09
Q06HQ7 1474 Phospholipase B1, membran yes N/A 0.471 0.033 0.557 8e-09
O54728 1450 Phospholipase B1, membran yes N/A 0.518 0.037 0.508 2e-08
Q6P1J6 1458 Phospholipase B1, membran yes N/A 0.452 0.032 0.56 2e-08
O70320 1463 Phospholipase B1, membran yes N/A 0.471 0.034 0.519 6e-08
Q05017 1458 Phospholipase B1, membran yes N/A 0.452 0.032 0.54 2e-07
>sp|Q3TTY0|PLB1_MOUSE Phospholipase B1, membrane-associated OS=Mus musculus GN=Plb1 PE=2 SV=2 Back     alignment and function desciption
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 2/50 (4%)

Query: 26  PNNVNQLRPGDIDIVGAIGDSITAGNGIVAT--NPSQVNTENRGLSWSVG 73
           P  V+ LRP DI I+GA+GDS+TAGNG  A+  N   V TE RGLSWSVG
Sbjct: 384 PTTVHSLRPADIKIIGALGDSLTAGNGAGASPWNILDVLTEYRGLSWSVG 433




Membrane-associated phospholipase. Exhibits a calcium-independent broad substrate specificity including phospholipase A2/lysophospholipase activity. Preferential hydrolysis at the sn-2 position of diacylphospholipids and diacyglycerol, whereas it shows no positional specificity toward triacylglycerol. Exhibits also esterase activity toward p-nitrophenyl. May act on the brush border membrane to facilitate the absorption of digested lipids.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: 5
>sp|Q06HQ7|PLB1_MONDO Phospholipase B1, membrane-associated OS=Monodelphis domestica GN=PLB1 PE=2 SV=1 Back     alignment and function description
>sp|O54728|PLB1_RAT Phospholipase B1, membrane-associated OS=Rattus norvegicus GN=Plb1 PE=1 SV=1 Back     alignment and function description
>sp|Q6P1J6|PLB1_HUMAN Phospholipase B1, membrane-associated OS=Homo sapiens GN=PLB1 PE=1 SV=3 Back     alignment and function description
>sp|O70320|PLB1_CAVPO Phospholipase B1, membrane-associated OS=Cavia porcellus GN=PLB1 PE=1 SV=1 Back     alignment and function description
>sp|Q05017|PLB1_RABIT Phospholipase B1, membrane-associated OS=Oryctolagus cuniculus GN=PLB1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
170063147 218 phospholipase b, plb1 [Culex quinquefasc 0.660 0.321 0.597 7e-17
328793158 407 PREDICTED: phospholipase B1, membrane-as 0.584 0.152 0.596 2e-16
312378272178 hypothetical protein AND_10226 [Anophele 0.679 0.404 0.569 2e-16
242024435 430 phospholipase B, plb1, putative [Pedicul 0.584 0.144 0.580 1e-15
380022592 407 PREDICTED: phospholipase B1, membrane-as 0.584 0.152 0.580 1e-15
158295806 420 AGAP006396-PA [Anopheles gambiae str. PE 0.660 0.166 0.583 1e-15
242024431 413 phospholipase B, plb1, putative [Pedicul 0.660 0.169 0.541 4e-15
312383619 318 hypothetical protein AND_03160 [Anophele 0.622 0.207 0.560 5e-15
158293931 374 AGAP011511-PA [Anopheles gambiae str. PE 0.613 0.173 0.553 9e-15
66512536 409 PREDICTED: phospholipase B1, membrane-as 0.584 0.151 0.548 9e-15
>gi|170063147|ref|XP_001866976.1| phospholipase b, plb1 [Culex quinquefasciatus] gi|167880883|gb|EDS44266.1| phospholipase b, plb1 [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 2/72 (2%)

Query: 4   KVQPHY--EGPFPCDLSQARSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQV 61
           KVQP +  + PF C+ +  RSP  P +V+ LRPGDID+VGAIGDS+TAGNG +ATN  +V
Sbjct: 109 KVQPQFPADAPFFCNTTGMRSPTVPTSVDALRPGDIDVVGAIGDSLTAGNGAMATNLLEV 168

Query: 62  NTENRGLSWSVG 73
             EN+GLSWS+G
Sbjct: 169 FVENKGLSWSIG 180




Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328793158|ref|XP_395971.3| PREDICTED: phospholipase B1, membrane-associated-like [Apis mellifera] Back     alignment and taxonomy information
>gi|312378272|gb|EFR24896.1| hypothetical protein AND_10226 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|242024435|ref|XP_002432633.1| phospholipase B, plb1, putative [Pediculus humanus corporis] gi|212518103|gb|EEB19895.1| phospholipase B, plb1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|380022592|ref|XP_003695124.1| PREDICTED: phospholipase B1, membrane-associated-like [Apis florea] Back     alignment and taxonomy information
>gi|158295806|ref|XP_001688865.1| AGAP006396-PA [Anopheles gambiae str. PEST] gi|157016213|gb|EDO63871.1| AGAP006396-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|242024431|ref|XP_002432631.1| phospholipase B, plb1, putative [Pediculus humanus corporis] gi|212518101|gb|EEB19893.1| phospholipase B, plb1, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
>gi|312383619|gb|EFR28637.1| hypothetical protein AND_03160 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|158293931|ref|XP_315275.3| AGAP011511-PA [Anopheles gambiae str. PEST] gi|157016481|gb|EAA10654.3| AGAP011511-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|66512536|ref|XP_624268.1| PREDICTED: phospholipase B1, membrane-associated-like [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query106
FB|FBgn0036939 424 CG7365 [Drosophila melanogaste 0.584 0.146 0.553 3.5e-14
FB|FBgn0031735 447 CG11029 [Drosophila melanogast 0.584 0.138 0.516 2.2e-12
UNIPROTKB|F1NFV7 1328 LOC100858161 "Uncharacterized 0.650 0.051 0.486 3.5e-10
UNIPROTKB|H7C012 510 PLB1 "Phospholipase B1, membra 0.490 0.101 0.535 2.3e-09
ZFIN|ZDB-GENE-120709-93 1069 si:ch211-214p16.3 "si:ch211-21 0.566 0.056 0.508 5.1e-09
MGI|MGI:1922406 1478 Plb1 "phospholipase B1" [Mus m 0.650 0.046 0.486 5.9e-09
UNIPROTKB|H7BYX7 1446 PLB1 "Phospholipase B1, membra 0.490 0.035 0.535 9.3e-09
UNIPROTKB|Q6P1J6 1458 PLB1 "Phospholipase B1, membra 0.490 0.035 0.535 9.4e-09
UNIPROTKB|H7BZW4277 PLB1 "Phospholipase B1, membra 0.566 0.216 0.459 3.7e-08
UNIPROTKB|F1MRH1 1446 F1MRH1 "Uncharacterized protei 0.622 0.045 0.486 4.1e-08
FB|FBgn0036939 CG7365 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 189 (71.6 bits), Expect = 3.5e-14, P = 3.5e-14
 Identities = 36/65 (55%), Positives = 46/65 (70%)

Query:    15 CDLSQA---RSPLPPNNVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWS 71
             CD       RSP  P +V++LRPGDID++GA+GDS+TAGNGI ATN   V  ENRG+ WS
Sbjct:    79 CDADHGPGKRSPERPTSVHRLRPGDIDVIGAMGDSLTAGNGIFATNLLHVTVENRGVVWS 138

Query:    72 VGKNF 76
             +G  +
Sbjct:   139 IGGQY 143




GO:0004620 "phospholipase activity" evidence=ISS
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0006911 "phagocytosis, engulfment" evidence=IMP
FB|FBgn0031735 CG11029 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1NFV7 LOC100858161 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|H7C012 PLB1 "Phospholipase B1, membrane-associated" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-120709-93 si:ch211-214p16.3 "si:ch211-214p16.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:1922406 Plb1 "phospholipase B1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|H7BYX7 PLB1 "Phospholipase B1, membrane-associated" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q6P1J6 PLB1 "Phospholipase B1, membrane-associated" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|H7BZW4 PLB1 "Phospholipase B1, membrane-associated" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1MRH1 F1MRH1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q05017PLB1_RABIT3, ., 1, ., 1, ., 50.540.45280.0329yesN/A
O70320PLB1_CAVPO3, ., 1, ., 1, ., 50.51920.47160.0341yesN/A
O54728PLB1_RAT3, ., 1, ., 1, ., 50.50870.51880.0379yesN/A
Q3TTY0PLB1_MOUSE3, ., 1, ., 1, ., 50.620.45280.0324yesN/A
Q6P1J6PLB1_HUMAN3, ., 1, ., 1, ., 50.560.45280.0329yesN/A
Q06HQ7PLB1_MONDO3, ., 1, ., 1, ., 50.55760.47160.0339yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query106
cd01824 288 cd01824, Phospholipase_B_like, Phospholipase-B_lik 3e-18
>gnl|CDD|238862 cd01824, Phospholipase_B_like, Phospholipase-B_like Back     alignment and domain information
 Score = 76.6 bits (189), Expect = 3e-18
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 28 NVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVG 73
          +V++LRPGDI ++ A+GDS+TAGNG  + N   + TE RGLSWS+G
Sbjct: 1  SVHRLRPGDIKVIAALGDSLTAGNGAGSANNLDLLTEYRGLSWSIG 46


This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. Length = 288

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 106
cd01824 288 Phospholipase_B_like Phospholipase-B_like. This su 99.96
KOG3670|consensus 397 99.92
cd01844 177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 95.48
cd01820 214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 95.14
cd01822 177 Lysophospholipase_L1_like Lysophospholipase L1-lik 94.88
cd01825 189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 93.67
cd01831 169 Endoglucanase_E_like Endoglucanase E-like members 93.05
cd01832 185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 92.39
cd01835 193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 92.05
cd01839 208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 91.76
cd04506 204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 91.5
cd01823 259 SEST_like SEST_like. A family of secreted SGNH-hyd 91.4
cd01830 204 XynE_like SGNH_hydrolase subfamily, similar to the 91.4
cd01838 199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 91.24
cd01836 191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 90.71
cd01827 188 sialate_O-acetylesterase_like1 sialate O-acetylest 90.3
cd01829 200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 89.88
cd01841 174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 89.17
cd04501 183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 88.14
cd01834 191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 87.53
cd00229 187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 86.93
cd01821 198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 85.39
PRK10528 191 multifunctional acyl-CoA thioesterase I and protea 85.12
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 85.09
PF00657 234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 81.78
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 81.19
PF13472 179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 80.41
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
Probab=99.96  E-value=6e-30  Score=202.31  Aligned_cols=69  Identities=42%  Similarity=0.729  Sum_probs=65.7

Q ss_pred             cccccCCCCcceEeecchhHHHhcCCccCCCCCcccccccceeecCCCCCCcccc---c--ccccCCccccceee
Q psy3095          28 NVNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWSVGKNFGPARRR---P--ANHYQVELISHTCQ   97 (106)
Q Consensus        28 sVh~LRP~DI~VIaAlGDSlTAG~ga~~~~~~~~~~EyRG~SfsiGGd~~~~~t~---p--lr~ynp~l~G~s~~   97 (106)
                      |||+|||+|||||||||||+|||+||++.+.+|+..||||+||++||| .+|+++   |  ||+|||+|+|+|+.
T Consensus         1 sv~~lrp~DI~viaA~GDSltag~ga~~~~~~~~~~e~rG~s~~~Gg~-~~~~~~~Tlpnil~~fnp~l~G~s~~   74 (288)
T cd01824           1 SVHRLRPGDIKVIAALGDSLTAGNGAGSANNLDLLTEYRGLSWSIGGD-STLRGLTTLPNILREFNPSLYGYSVG   74 (288)
T ss_pred             CccccccccCeEEeeccccccccCCCCCCCccccccccCCceEecCCc-ccccccccHHHHHHHhCCCcccccCC
Confidence            799999999999999999999999999999999999999999999999 998865   5  99999999999986



This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.

>KOG3670|consensus Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query106
1esc_A 306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 93.31
3dci_A 232 Arylesterase; SGNH_hydrolase SUBF structural genom 92.49
3hp4_A 185 GDSL-esterase; psychrotrophic, monoethylphosphonat 92.39
2q0q_A 216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 91.06
2vpt_A 215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 90.92
3dc7_A 232 Putative uncharacterized protein LP_3323; NESG LPR 90.9
1vjg_A 218 Putative lipase from the G-D-S-L family; structura 90.75
3bzw_A 274 Putative lipase; protein structure initiative II, 90.52
3rjt_A 216 Lipolytic protein G-D-S-L family; PSI-biology, mid 90.19
2waa_A 347 Acetyl esterase, xylan esterase, putative, AXE2C; 89.85
4h08_A 200 Putative hydrolase; GDSL-like lipase/acylhydrolase 89.7
2wao_A 341 Endoglucanase E; plant cell WALL degradation, carb 89.68
2w9x_A 366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 89.05
1ivn_A 190 Thioesterase I; hydrolase, protease; 1.90A {Escher 88.94
1fxw_F 229 Alpha2, platelet-activating factor acetylhydrolase 88.33
1yzf_A 195 Lipase/acylhydrolase; structural GENO PSI, protein 88.19
1es9_A 232 PAF-AH, platelet-activating factor acetylhydrolase 88.05
3mil_A 240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 86.7
2hsj_A 214 Putative platelet activating factor; structr genom 86.28
3p94_A 204 GDSL-like lipase; serine hydrolase, catalytic tria 86.24
4hf7_A 209 Putative acylhydrolase; PF13472 family, structural 82.13
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
Probab=93.31  E-value=0.033  Score=41.80  Aligned_cols=18  Identities=39%  Similarity=0.296  Sum_probs=15.2

Q ss_pred             ceEeecchhHHHhcCCcc
Q psy3095          38 DIVGAIGDSITAGNGIVA   55 (106)
Q Consensus        38 ~VIaAlGDSlTAG~ga~~   55 (106)
                      .-|.|||||+|+|+|...
T Consensus         6 ~~~valGDS~taG~g~~~   23 (306)
T 1esc_A            6 VPTVFFGDSYTANFGIAP   23 (306)
T ss_dssp             EEEEECCSHHHHTTTCSS
T ss_pred             ceEEEECchhhhCCCCCC
Confidence            358899999999999764



>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 106
d2hsja1 211 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 0.001
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Length = 211 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Acetylhydrolase
domain: Uncharacterized protein SP1450
species: Streptococcus pneumoniae [TaxId: 1313]
 Score = 33.9 bits (76), Expect = 0.001
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 29 VNQLRPGDIDIVGAIGDSITAGNGIVATNPSQVNTENRGLSWS 71
          +N +   + +I+  IGDSI     +     +     NRG+   
Sbjct: 24 LNHISVVEPNIL-FIGDSIVEYYPLQELFGTSKTIVNRGIRGY 65


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query106
d3dc7a1 207 Uncharacterized protein Lp3323 {Lactobacillus plan 95.64
d3bzwa1 248 Uncharacterized protein BT2961 {Bacteroides thetai 94.86
d1vjga_ 201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 94.07
d1jrla_ 179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 93.64
d1esca_ 302 Esterase {Streptomyces scabies [TaxId: 1930]} 93.49
d1fxwf_ 212 Platelet-activating factor acetylhydrolase {Cow (B 90.49
d1yzfa1 195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 89.71
d1es9a_ 212 Platelet-activating factor acetylhydrolase {Cow (B 88.92
d1k7ca_ 233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 87.85
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.64  E-value=0.0017  Score=42.39  Aligned_cols=39  Identities=23%  Similarity=0.336  Sum_probs=26.5

Q ss_pred             cceEeecchhHHHhcCCccCCCCCcccc----cccceeecCCC
Q psy3095          37 IDIVGAIGDSITAGNGIVATNPSQVNTE----NRGLSWSVGKN   75 (106)
Q Consensus        37 I~VIaAlGDSlTAG~ga~~~~~~~~~~E----yRG~SfsiGGd   75 (106)
                      .|=|+++|||+|+|.|....+..+.+.+    ++=....+||.
T Consensus         4 ~kri~~iGDSit~g~g~~~~~~~~~l~~~~~~~~~~N~gi~G~   46 (207)
T d3dc7a1           4 FKRPAWLGDSITANNGLATVHYHDILAADWDVERSDNLGISGS   46 (207)
T ss_dssp             CSSEEEEESTTTSTTCSSSSCHHHHHHHHHTCSCCEEEECTTC
T ss_pred             CCEEEEEehHhhcCCCCCCccHHHHHHHHcCCCceEEEEeccc
Confidence            3558999999999998777654433332    33345677887



>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure