Psyllid ID: psy3259

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------7
Protein Sequence
MSLLGFEPESFPDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEcccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccEEEEEcccccHHHHHHHHHHHccccHHHHHccEEHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
msllgfepesfpdspqhsLTVLLLGESGLVYCMEQIFLygfkssrlfsrNLNIWDLFIKIYQEIFSYTF
Flexible Loop (DISEMBL)
msllgfepesfpdspqHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Low Complexity Region (SEG)
MSLLGFEPESFPDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Disordered region (IsUnstruct)
******************LTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSY**
Disordered Region (DISOPRED)
*S**G*************LTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Disordered Region (DISEMBL)
***************QHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Disordered Region (DISPRO)
*******PESFP***QHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIF****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLLGFEPESFPDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	69	2.2.26 [Sep-21-2011]
Q6ZUT9	1274	DENN domain-containing pr	yes	N/A	0.710	0.038	0.530	4e-09
Q6NXD8	1311	DENN domain-containing pr	yes	N/A	0.710	0.037	0.510	6e-09
A2RSQ0	1274	DENN domain-containing pr	yes	N/A	0.695	0.037	0.541	1e-08
Q6PAL8	1287	DENN domain-containing pr	no	N/A	0.681	0.036	0.541	2e-06
Q6IQ26	1287	DENN domain-containing pr	no	N/A	0.681	0.036	0.541	2e-06

>sp|Q6ZUT9|DEN5B_HUMAN DENN domain-containing protein 5B OS=Homo sapiens GN=DENND5B PE=1 SV=2

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 37/49 (75%)

Query: 12   PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKI 60
            P+  + SLTVLL GE+GLV  +EQ+F +GFKS+R+F +N+ IWD   K+
Sbjct: 1110 PEKERGSLTVLLCGENGLVAALEQVFHHGFKSARIFHKNVFIWDFIEKV 1158

Homo sapiens (taxid: 9606)

>sp|Q6NXD8|DEN5B_DANRE DENN domain-containing protein 5B OS=Danio rerio GN=dennd5b PE=2 SV=2

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 37/49 (75%)

Query: 12   PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKI 60
            P+  + SLTVLL GE GLV+ +EQ F +GF+S+R+F +N+ +WD F +I
Sbjct: 1147 PEKERGSLTVLLCGEGGLVWALEQFFHHGFRSARIFQKNVFVWDFFERI 1195

Danio rerio (taxid: 7955)

>sp|A2RSQ0|DEN5B_MOUSE DENN domain-containing protein 5B OS=Mus musculus GN=Dennd5b PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 36/48 (75%)

Query: 12   PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
            P+  + SLTVLL GE+GLV  +EQ+F +GFKS+R+F +N+ IWD   K
Sbjct: 1110 PEKERGSLTVLLCGENGLVAALEQVFHHGFKSARIFHKNVFIWDFVEK 1157

Mus musculus (taxid: 10090)

>sp|Q6PAL8|DEN5A_MOUSE DENN domain-containing protein 5A OS=Mus musculus GN=Dennd5a PE=1 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 12   PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
            P+  + SLT+LL GE GLV  +EQ F +GFKS RLF +N+ IWD   K
Sbjct: 1126 PEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLF-KNVFIWDFLEK 1172

May be involved in Rab6-mediated GTPase signaling.

Mus musculus (taxid: 10090)

>sp|Q6IQ26|DEN5A_HUMAN DENN domain-containing protein 5A OS=Homo sapiens GN=DENND5A PE=1 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 12   PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
            P+  + SLT+LL GE GLV  +EQ F +GFKS RLF +N+ IWD   K
Sbjct: 1126 PEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLF-KNVFIWDFLEK 1172

May be involved in Rab6-mediated GTPase signaling.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
312385584	2422	hypothetical protein AND_00598 [Anophele	0.739	0.021	0.568	2e-09
157123471	1333	rab6-interacting [Aedes aegypti] gi|1088	0.666	0.034	0.608	1e-08
158287203	1434	AGAP011351-PA [Anopheles gambiae str. PE	0.739	0.035	0.549	1e-08
195586950	1447	GD13622 [Drosophila simulans] gi|1941952	0.739	0.035	0.557	2e-08
24655298	1449	CG7852, isoform A [Drosophila melanogast	0.739	0.035	0.557	2e-08
195336604	1423	GM14418 [Drosophila sechellia] gi|194128	0.739	0.035	0.557	2e-08
195376917	1447	GJ12046 [Drosophila virilis] gi|19415439	0.681	0.032	0.625	3e-08
194864868	1447	GG14796 [Drosophila erecta] gi|190652930	0.681	0.032	0.625	3e-08
195127141	1454	GI13278 [Drosophila mojavensis] gi|19391	0.681	0.032	0.625	3e-08
170040773	1421	rab6-interacting [Culex quinquefasciatus	0.666	0.032	0.565	3e-08

>gi|312385584|gb|EFR30044.1| hypothetical protein AND_00598 [Anopheles darlingi]

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query: 13   DSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQE 63
            D    SLT LL GE+GLV C+EQ FL GF+SSRLF RNL +WD F+++ ++
Sbjct: 1268 DRDASSLTNLLCGENGLVKCLEQAFLCGFRSSRLFGRNLYLWDYFVRVKEQ 1318

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157123471|ref|XP_001660160.1| rab6-interacting [Aedes aegypti] gi|108874390|gb|EAT38615.1| AAEL009495-PA, partial [Aedes aegypti]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 36/46 (78%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQE 63
            SLT LL GE+GLV C+EQ FL GF+S RLF RNL +WD FI++ ++
Sbjct: 1141 SLTNLLCGENGLVKCLEQAFLCGFRSQRLFGRNLYLWDYFIRVKEQ 1186

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287203|ref|XP_564133.3| AGAP011351-PA [Anopheles gambiae str. PEST] gi|157019538|gb|EAL41523.3| AGAP011351-PA [Anopheles gambiae str. PEST]

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/51 (54%), Positives = 37/51 (72%)

Query: 13   DSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQE 63
            D    SLT LL GE+GLV C+EQ FL GF+SSRLF RN  +WD F+++ ++
Sbjct: 1250 DRDASSLTNLLCGENGLVKCLEQAFLCGFRSSRLFGRNFYLWDYFVRVKEQ 1300

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195586950|ref|XP_002083230.1| GD13622 [Drosophila simulans] gi|194195239|gb|EDX08815.1| GD13622 [Drosophila simulans]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF 69
            +LT LL G+ GLV C+EQ+FL GF+S+R F RNL IWD F KI +E+F +  
Sbjct: 1268 TLTNLLCGDDGLVKCLEQVFLCGFRSARFFGRNLYIWDYFTKI-KELFEHNL 1318

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24655298|ref|NP_647620.1| CG7852, isoform A [Drosophila melanogaster] gi|24655301|ref|NP_728624.1| CG7852, isoform B [Drosophila melanogaster] gi|7292095|gb|AAF47507.1| CG7852, isoform A [Drosophila melanogaster] gi|23092785|gb|AAN11487.1| CG7852, isoform B [Drosophila melanogaster]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF 69
            +LT LL G+ GLV C+EQ+FL GF+S+R F RNL IWD F KI +E+F +  
Sbjct: 1270 TLTNLLCGDDGLVKCLEQVFLCGFRSARFFGRNLYIWDYFTKI-KELFEHNL 1320

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195336604|ref|XP_002034925.1| GM14418 [Drosophila sechellia] gi|194128018|gb|EDW50061.1| GM14418 [Drosophila sechellia]

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/52 (55%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSYTF 69
            +LT LL G+ GLV C+EQ+FL GF+S+R F RNL IWD F KI +E+F +  
Sbjct: 1244 TLTNLLCGDDGLVKCLEQVFLCGFRSARFFGRNLYIWDYFTKI-KELFEHNL 1294

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195376917|ref|XP_002047239.1| GJ12046 [Drosophila virilis] gi|194154397|gb|EDW69581.1| GJ12046 [Drosophila virilis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIF 65
            +LT LL G+ GLV C+EQ+FL GF+SSR F RNL IWD F KI +E+F
Sbjct: 1269 TLTNLLCGDDGLVKCLEQVFLCGFRSSRFFGRNLYIWDYFTKI-KELF 1315

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194864868|ref|XP_001971147.1| GG14796 [Drosophila erecta] gi|190652930|gb|EDV50173.1| GG14796 [Drosophila erecta]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIF 65
            +LT LL G+ GLV C+EQ+FL GF+SSR F RNL IWD F KI +E+F
Sbjct: 1268 TLTNLLCGDDGLVKCLEQVFLCGFRSSRFFGRNLYIWDYFTKI-KELF 1314

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195127141|ref|XP_002008027.1| GI13278 [Drosophila mojavensis] gi|193919636|gb|EDW18503.1| GI13278 [Drosophila mojavensis]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIF 65
            +LT LL G+ GLV C+EQ+FL GF+SSR F RNL IWD F KI +E+F
Sbjct: 1276 TLTNLLCGDDGLVKCLEQVFLCGFRSSRFFGRNLYIWDYFTKI-KELF 1322

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170040773|ref|XP_001848162.1| rab6-interacting [Culex quinquefasciatus] gi|167864373|gb|EDS27756.1| rab6-interacting [Culex quinquefasciatus]

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 18   SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQE 63
            SLT LL GE+GLV C+EQ FL GF+S R+F RNL +WD F+++ ++
Sbjct: 1229 SLTNLLCGENGLVKCLEQAFLCGFRSQRMFGRNLYLWDYFVRVKEQ 1274

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	69
FB|FBgn0035229	1449	CG7852 [Drosophila melanogaste	0.710	0.033	0.58	3.5e-09
ZFIN|ZDB-GENE-030131-2248	1325	dennd5b "DENN/MADD domain cont	0.710	0.036	0.510	2.2e-08
UNIPROTKB|F1MQ87	1237	DENND5B "Uncharacterized prote	0.681	0.037	0.583	2.6e-08
UNIPROTKB|Q6ZUT9	1274	DENND5B "DENN domain-containin	0.710	0.038	0.530	2.7e-08
UNIPROTKB|E1C222	1269	DENND5B "Uncharacterized prote	0.681	0.037	0.541	7.3e-08
MGI|MGI:2444273	1274	Dennd5b "DENN/MADD domain cont	0.681	0.036	0.541	7.3e-08
UNIPROTKB|F1NAK6	1233	Gga.54709 "Uncharacterized pro	0.681	0.038	0.562	3.1e-07
UNIPROTKB|B3KWN5	630	DENND5A "DENN domain-containin	0.681	0.074	0.541	1.2e-06
UNIPROTKB|F1RNJ4	1251	DENND5A "Uncharacterized prote	0.681	0.037	0.541	2.8e-06
UNIPROTKB|F1PTX0	1252	DENND5A "Uncharacterized prote	0.681	0.037	0.541	2.8e-06

FB|FBgn0035229 CG7852 [Drosophila melanogaster (taxid:7227)]

 Score = 150 (57.9 bits), Expect = 3.5e-09, P = 3.5e-09
 Identities = 29/50 (58%), Positives = 38/50 (76%)

Query:    18 SLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEIFSY 67
             +LT LL G+ GLV C+EQ+FL GF+S+R F RNL IWD F KI +E+F +
Sbjct:  1270 TLTNLLCGDDGLVKCLEQVFLCGFRSARFFGRNLYIWDYFTKI-KELFEH 1318

GO:0008150 "biological_process" evidence=ND

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISS

ZFIN|ZDB-GENE-030131-2248 dennd5b "DENN/MADD domain containing 5B" [Danio rerio (taxid:7955)]

 Score = 142 (55.0 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 25/49 (51%), Positives = 37/49 (75%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKI 60
             P+  + SLTVLL GE GLV+ +EQ F +GF+S+R+F +N+ +WD F +I
Sbjct:  1161 PEKERGSLTVLLCGEGGLVWALEQFFHHGFRSARIFQKNVFVWDFFERI 1209

GO:0008150 "biological_process" evidence=ND

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|F1MQ87 DENND5B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 28/48 (58%), Positives = 38/48 (79%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLTVLL GESGLV  +EQ+F +GFKS+R+F +N+ IWD FI+
Sbjct:  1070 PEKERGSLTVLLCGESGLVAALEQVFHHGFKSARIFHKNVFIWD-FIE 1116

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IEA

UNIPROTKB|Q6ZUT9 DENND5B "DENN domain-containing protein 5B" [Homo sapiens (taxid:9606)]

 Score = 141 (54.7 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 26/49 (53%), Positives = 37/49 (75%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKI 60
             P+  + SLTVLL GE+GLV  +EQ+F +GFKS+R+F +N+ IWD   K+
Sbjct:  1110 PEKERGSLTVLLCGENGLVAALEQVFHHGFKSARIFHKNVFIWDFIEKV 1158

GO:0016021 "integral to membrane" evidence=IEA

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IDA

UNIPROTKB|E1C222 DENND5B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 137 (53.3 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 26/48 (54%), Positives = 38/48 (79%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLT+LL GE+GLV  +EQ+F +GFKS+R+F +N+ IWD FI+
Sbjct:  1105 PEKERGSLTILLCGENGLVAALEQVFHHGFKSARIFHKNVFIWD-FIE 1151

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IEA

MGI|MGI:2444273 Dennd5b "DENN/MADD domain containing 5B" [Mus musculus (taxid:10090)]

 Score = 137 (53.3 bits), Expect = 7.3e-08, P = 7.3e-08
 Identities = 26/48 (54%), Positives = 38/48 (79%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLTVLL GE+GLV  +EQ+F +GFKS+R+F +N+ IWD F++
Sbjct:  1110 PEKERGSLTVLLCGENGLVAALEQVFHHGFKSARIFHKNVFIWD-FVE 1156

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=ISO

UNIPROTKB|F1NAK6 Gga.54709 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 131 (51.2 bits), Expect = 3.1e-07, P = 3.1e-07
 Identities = 27/48 (56%), Positives = 35/48 (72%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLT+LL GESGLV  +EQ+F +GFKS RLF +N+ IWD   K
Sbjct:  1072 PEKERGSLTLLLCGESGLVSALEQVFQHGFKSPRLF-KNVFIWDFLEK 1118

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

UNIPROTKB|B3KWN5 DENND5A "DENN domain-containing protein 5A" [Homo sapiens (taxid:9606)]

 Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLT+LL GE GLV  +EQ F +GFKS RLF +N+ IWD   K
Sbjct:   469 PEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLF-KNVFIWDFLEK 515

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

UNIPROTKB|F1RNJ4 DENND5A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLT+LL GE GLV  +EQ F +GFKS RLF +N+ IWD   K
Sbjct:  1090 PEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLF-KNVFIWDFLEK 1136

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|F1PTX0 DENND5A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query:    12 PDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIK 59
             P+  + SLT+LL GE GLV  +EQ F +GFKS RLF +N+ IWD   K
Sbjct:  1091 PEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLF-KNVFIWDFLEK 1137

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0017112 "Rab guanyl-nucleotide exchange factor activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6ZUT9	DEN5B_HUMAN	No assigned EC number	0.5306	0.7101	0.0384	yes	N/A
A2RSQ0	DEN5B_MOUSE	No assigned EC number	0.5416	0.6956	0.0376	yes	N/A
Q6NXD8	DEN5B_DANRE	No assigned EC number	0.5102	0.7101	0.0373	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	69
KOG2080|consensus	1295		97.81
PF02759	133	RUN: RUN domain; InterPro: IPR004012 This domain i	97.51
KOG2080|consensus	1295		94.58

>KOG2080|consensus

Probab=97.81  E-value=2.9e-06  Score=74.13  Aligned_cols=52  Identities=35%  Similarity=0.503  Sum_probs=44.7

Q ss_pred             CCccceeeeecCCchHHHHHHHHHHhhccccccc-cccchHHHHHHHHHHHhh
Q psy3259          15 PQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFS-RNLNIWDLFIKIYQEIFS   66 (69)
Q Consensus        15 ~r~sLT~LLCGE~GLV~~LeqvF~~GfkS~RlF~-rn~yiWDy~~kv~~~f~~   66 (69)
                      .++.|.+++||-+|||.+++|+|+.|.+++++|- +|-.+||+|+++|.||++
T Consensus      1161 ~k~~l~~~~~~~k~L~~~~~q~~~~~~~~sl~~~f~n~~~~~~i~~v~~~~~~ 1213 (1295)
T KOG2080|consen 1161 VKSELAHLLCGQKGLVLAIEQAFQLGRQESLLKYFRNTCPWDYIERVCSWFFE 1213 (1295)
T ss_pred             HHHHHHHHHhhhHHHHHHHHhHHhhccHHHHHHHHhccChHHHHHHHHHHHHH
Confidence            3445666778889999999999999999988753 678999999999999986

>PF02759 RUN: RUN domain; InterPro: IPR004012 This domain is present in several proteins that are linked to the functions of GTPases in the Rap and Rab families

Probab=97.51  E-value=7.2e-05  Score=46.52  Aligned_cols=33  Identities=33%  Similarity=0.591  Sum_probs=23.2

Q ss_pred             hHHHHHHHHHHhhcc----ccccccccchHHHHHHHH
Q psy3259          29 LVYCMEQIFLYGFKS----SRLFSRNLNIWDLFIKIY   61 (69)
Q Consensus        29 LV~~LeqvF~~GfkS----~RlF~rn~yiWDy~~kv~   61 (69)
                      |+.+||++|.||+|+    .+.+.++..+||+++++.
T Consensus         2 Lc~~le~il~hGlk~~~~~~~~~~~~~~~w~~~~~~~   38 (133)
T PF02759_consen    2 LCSALEAILSHGLKPSRSRARGFQRRSDYWDFIEKVE   38 (133)
T ss_dssp             HHHHHHHHHHTTB---SS---TT----TTHHHHHTHH
T ss_pred             hHHHHHHHHHcCCchhhHHHhhccCCCchHHHHHHHh
Confidence            679999999999996    778899999999999984

They could therefore play important roles in multiple Ras-like GTPase signalling pathways.; PDB: 3CWZ_B 2CXF_A 2DWK_A 2DWG_A 2CXL_A.

>KOG2080|consensus

Probab=94.58  E-value=0.0066  Score=53.87  Aligned_cols=43  Identities=14%  Similarity=0.040  Sum_probs=32.4

Q ss_pred             ccCCCCCCccceeeeecCCchHHHHHHHHHHhhccccccccccchHHHHHHHHHHH
Q psy3259           9 ESFPDSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLFSRNLNIWDLFIKIYQEI   64 (69)
Q Consensus         9 ~~~pe~~r~sLT~LLCGE~GLV~~LeqvF~~GfkS~RlF~rn~yiWDy~~kv~~~f   64 (69)
                      +|+++++++.|+.|+||+.|           ||+|.|.| |+ |+||++-+.+.-+
T Consensus      1134 ~~k~~~~~~~lg~~~n~l~~-----------~fcs~R~~-k~-~l~~~~~~~k~L~ 1176 (1295)
T KOG2080|consen 1134 KTKVSEVEHLLGEAVNALVK-----------YFCSERKV-KS-ELAHLLCGQKGLV 1176 (1295)
T ss_pred             cccchhhhhhHHHHHHHHHh-----------hhcCHHHH-HH-HHHHHHhhhHHHH
Confidence            46677777777777776666           88888888 55 9999998776544

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	69
4giw_A	198	RUN and SH3 domain-containing protein 1; NGF-TRKA	97.4
2dwk_A	180	Protein RUFY3; RUN domain, effector, RAP2, bundle,	94.74

>4giw_A RUN and SH3 domain-containing protein 1; NGF-TRKA signaling pathway, NF-KB pathway, signaling protein; 2.00A {Homo sapiens}

Probab=97.40  E-value=3.2e-05  Score=52.90  Aligned_cols=47  Identities=17%  Similarity=0.191  Sum_probs=37.4

Q ss_pred             CCCCccceeeeecCCchHHHHHHHHHHhhcccccc----ccccchHHHHHHHH
Q psy3259          13 DSPQHSLTVLLLGESGLVYCMEQIFLYGFKSSRLF----SRNLNIWDLFIKIY   61 (69)
Q Consensus        13 e~~r~sLT~LLCGE~GLV~~LeqvF~~GfkS~RlF----~rn~yiWDy~~kv~   61 (69)
                      +....+++.+++|  .|.+|||.+|.||.|+.+.+    .++..+||+++.+.
T Consensus        41 ~~~~~~i~~lvl~--~LC~aLe~iL~HGLk~~~~~~~~g~~~~~~W~~ie~~~   91 (198)
T 4giw_A           41 SRLSPDVGHLVLT--TLCPALHALVADGLKPFRKDLITGQRRSSPWSVVEASV   91 (198)
T ss_dssp             TTTCHHHHHHHHH--THHHHHHHHHHTTBCSEEEETTTEEEECCHHHHHHHHC
T ss_pred             cccCcchHHHHHH--HHHHHHHHHHHcCCccCCcccccccccCChHHHHHHHH
Confidence            4456678888884  59999999999999987654    35678999998763

>2dwk_A Protein RUFY3; RUN domain, effector, RAP2, bundle, protein binding, structural genomics, NPPSFA; 2.00A {Mus musculus} PDB: 2dwg_A 2cxf_A 2cxl_A

Probab=94.74  E-value=0.022  Score=38.40  Aligned_cols=35  Identities=17%  Similarity=0.374  Sum_probs=25.1

Q ss_pred             chHHHHHHHHHHhhccc-cccccccchHHHHHHHHH
Q psy3259          28 GLVYCMEQIFLYGFKSS-RLFSRNLNIWDLFIKIYQ   62 (69)
Q Consensus        28 GLV~~LeqvF~~GfkS~-RlF~rn~yiWDy~~kv~~   62 (69)
                      .|-.+||.+|.||.|.. .+|+.+--.||+++++..
T Consensus        46 ~LC~~lE~iL~HGLK~~~~~l~~~~~~W~~l~~~~~   81 (180)
T 2dwk_A           46 QFFVVMEHCLKHGLKAKKTFLGQNKSFWGPLELVEK   81 (180)
T ss_dssp             HHHHHHHHHHHTTBCC-------CCTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCccccCCCCCcHHHHHHHHHh
Confidence            45689999999999986 478888899999998753

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	69
d2cxfa1	167	Rap2 interacting protein X (RUFY3) {Mouse (Mus mus	97.09

>d2cxfa1 a.256.1.1 (A:83-249) Rap2 interacting protein X (RUFY3) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: RUN domain-like
superfamily: RUN domain-like
family: RUN domain
domain: Rap2 interacting protein X (RUFY3)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.09  E-value=0.00011  Score=47.01  Aligned_cols=35  Identities=17%  Similarity=0.401  Sum_probs=28.9

Q ss_pred             chHHHHHHHHHHhhcccc-ccccccchHHHHHHHHH
Q psy3259          28 GLVYCMEQIFLYGFKSSR-LFSRNLNIWDLFIKIYQ   62 (69)
Q Consensus        28 GLV~~LeqvF~~GfkS~R-lF~rn~yiWDy~~kv~~   62 (69)
                      -|..+||++|+||.|+.+ +|+++-.+||+++++..
T Consensus        39 ~Lc~~lE~iL~hGLK~~~~~~~~~~~~W~~l~~~~~   74 (167)
T d2cxfa1          39 QFFVVMEHCLKHGLKAKKTFLGQNKSFWGPLELVEK   74 (167)
T ss_dssp             HHHHHHHHHHTTTBCCCCCTTCCCCTTHHHHHTGGG
T ss_pred             HHHHHHHHHHHcCCcccccccCCCCcHHHHHHHHHH
Confidence            356899999999999876 36777789999988753