Psyllid ID: psy3290

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Secondary Structure (PSIPRED)
ccEEEEEEcccEEEEEEEcccccccccccccHHHHHHHHHHHHHccccccccccccEEEEcccccccEEEEEEccccHHHHHHHHHHHHHcccccEEccHHHHHHHHHHHHHHHcccEEEEEEccccccccEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccEEEEEccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHEEHccccccEEEEcccccHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mpwfgmdiggtlsklvyfepkditpdeaNSEIETLKNIRKYLTKnkaygstghrdthLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNmklekcdeldCLIRGMLFIEANYPLECYYwanstvedkctkvqydftnpypfiyn
Flexible Loop (DISEMBL)
mpwfgmdiggTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKaygstghrdthLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQevnmklekcDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTnpypfiyn
Low Complexity Region (SEG)
MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Disordered region (IsUnstruct)
**WFGMDIGGTLSKLVYFEPKDIT******EIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIY*
Disordered Region (DISOPRED)
MPWFGMDIGGTLSKLVYFE******************IRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Disordered Region (DISEMBL)
MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Disordered Region (DISPRO)
MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFIYN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q9BZ23	570	Pantothenate kinase 2, mi	yes	N/A	0.972	0.250	0.431	2e-28
Q8K4K6	548	Pantothenate kinase 1 OS=	no	N/A	0.979	0.262	0.417	5e-28
Q8R2W9	370	Pantothenate kinase 3 OS=	no	N/A	0.979	0.389	0.423	2e-27
Q9H999	370	Pantothenate kinase 3 OS=	no	N/A	0.979	0.389	0.423	2e-27
Q8TE04	598	Pantothenate kinase 1 OS=	no	N/A	0.945	0.232	0.411	2e-27
Q08DA5	370	Pantothenate kinase 3 OS=	no	N/A	0.972	0.386	0.404	3e-27

>sp|Q9BZ23|PANK2_HUMAN Pantothenate kinase 2, mitochondrial OS=Homo sapiens GN=PANK2 PE=1 SV=3

 Score =  124 bits (311), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 76/176 (43%), Positives = 101/176 (57%), Gaps = 33/176 (18%)

Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFG+DIGGTL KLVYFEPKDIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct: 212 PWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 271

Query: 62  YTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV-------------------N 92
             TL      L  I   + D    FI++        +  V                   +
Sbjct: 272 DLTLCGRKGNLHFIRFPTHDMPA-FIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGD 330

Query: 93  MKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           ++L K DELDCLI+G+L+I++   N   +CYY+ N    +KC K+ +D  NPYP +
Sbjct: 331 LQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386

May be the master regulator of the CoA biosynthesis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 3EC: 3

>sp|Q8K4K6|PANK1_MOUSE Pantothenate kinase 1 OS=Mus musculus GN=Pank1 PE=1 SV=1

 Score =  122 bits (307), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 73/175 (41%), Positives = 97/175 (55%), Gaps = 31/175 (17%)

Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++ 
Sbjct: 187 PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 246

Query: 62  YTTL----------------TLLCIELISDDTVVDFIRVI-------MRIQE-----VNM 93
             T+                  L I++ S+         +        + +E      ++
Sbjct: 247 NLTMCGRKGNLHFIRFPTCAMHLFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADL 306

Query: 94  KLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           +L K DELDCLI+G+L++++   N   ECYY+ N T  + C K  Y   NPYP +
Sbjct: 307 QLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 361

Plays a role in the physiological regulation of the intracellular CoA concentration.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 3

>sp|Q8R2W9|PANK3_MOUSE Pantothenate kinase 3 OS=Mus musculus GN=Pank3 PE=2 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11  FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70

Query: 61  LYTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV------------------- 91
              TL      L  I   + D +  FI++        +Q V                   
Sbjct: 71  KDLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLSATGGGAYKFEKDFRTIG 129

Query: 92  NMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           N+ L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 130 NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186

Plays a role in the physiological regulation of the intracellular CoA concentration.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 3

>sp|Q9H999|PANK3_HUMAN Pantothenate kinase 3 OS=Homo sapiens GN=PANK3 PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11  FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70

Query: 61  LYTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV------------------- 91
              TL      L  I   + D +  FI++        +Q V                   
Sbjct: 71  KDLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIG 129

Query: 92  NMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           N+ L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 130 NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186

Plays a role in the physiological regulation of the intracellular CoA concentration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 3

>sp|Q8TE04|PANK1_HUMAN Pantothenate kinase 1 OS=Homo sapiens GN=PANK1 PE=1 SV=2

 Score =  120 bits (302), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 94/180 (52%), Gaps = 41/180 (22%)

Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++ 
Sbjct: 237 PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 296

Query: 62  YTTL---------------------------------TLLCIELISDDTVVDFIRVIMRI 88
             T+                                 T LC          +  R+I   
Sbjct: 297 NLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMI--- 353

Query: 89  QEVNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
              +++L K DELDCLI+G+L++++   N   ECYY+ N T  + C K  Y   NPYP +
Sbjct: 354 --ADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 411

Plays a role in the physiological regulation of the intracellular CoA concentration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 3

>sp|Q08DA5|PANK3_BOVIN Pantothenate kinase 3 OS=Bos taurus GN=PANK3 PE=2 SV=1

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 98/178 (55%), Gaps = 35/178 (19%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 11  FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 70

Query: 61  LYTTL------------------------------TLLCIELISDDTVVDFIRVIMRIQE 90
              TL                              TL  +   +      F +    I  
Sbjct: 71  KDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLHTVLCATGGGAYKFEKDFRTIG- 129

Query: 91  VNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
            N+ L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 130 -NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186

Plays a role in the physiological regulation of the intracellular CoA concentration.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: .

EC: 3

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
322789845	850	hypothetical protein SINV_09037 [Solenop	0.986	0.170	0.537	3e-43
350415320	401	PREDICTED: pantothenate kinase 2, mitoch	0.986	0.361	0.526	1e-42
328783715	402	PREDICTED: pantothenate kinase 2, mitoch	0.986	0.360	0.526	2e-42
383866241	395	PREDICTED: pantothenate kinase 1-like [M	0.986	0.367	0.526	2e-42
380024634	402	PREDICTED: pantothenate kinase 2, mitoch	0.986	0.360	0.526	2e-42
282403503	404	fumble isoform 1 [Tribolium castaneum]	0.979	0.356	0.522	3e-42
340725581	395	PREDICTED: pantothenate kinase 1-like [B	0.986	0.367	0.526	4e-42
282403505	399	fumble isoform 2 [Tribolium castaneum]	0.979	0.360	0.522	4e-42
282403501	367	fumble isoform 3 [Tribolium castaneum] g	0.979	0.392	0.522	4e-42
307172941	400	Pantothenate kinase 1 [Camponotus florid	0.986	0.362	0.526	5e-42

>gi|322789845|gb|EFZ14992.1| hypothetical protein SINV_09037 [Solenopsis invicta]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 109/173 (63%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTL KLVYFEPKDIT DEA++E+ETLKNIR+YLTKN AYG TGHRDTHLQ+
Sbjct: 38  MPWFGMDIGGTLCKLVYFEPKDITRDEADAEVETLKNIRRYLTKNSAYGKTGHRDTHLQM 97

Query: 61  -------LYTTLTLL----C-----IELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +    C     + L     + + +  +               QEVN
Sbjct: 98  DNACIRNRRGTLHFIRFPTCEMGNFLALAKSKGMANLVTTVCATGGGAFKFEDNFKQEVN 157

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYWA+ T + KC KV YDF+ PYPF+
Sbjct: 158 MNLAKFDELDSLIRGMLYIETTNPHECYYWADPTDDSKCQKVPYDFSEPYPFL 210

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350415320|ref|XP_003490601.1| PREDICTED: pantothenate kinase 2, mitochondrial-like [Bombus impatiens]

 Score =  177 bits (450), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 109/173 (63%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTLSKLVYFEPKDIT DEA++E+ETLKNIR+YLT+N AYG TGHRDTHLQ+
Sbjct: 44  MPWFGMDIGGTLSKLVYFEPKDITRDEADAEVETLKNIRRYLTRNSAYGKTGHRDTHLQM 103

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               QEVN
Sbjct: 104 DNVCIRGRRGTLHFIRFPTSEMGNFLALARSKGMANLVTTVCATGGGAYKFEKNFKQEVN 163

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYW++ T + KC KV YDF+ PYPF+
Sbjct: 164 MNLAKFDELDSLIRGMLYIETTNPHECYYWSHPTDDSKCQKVPYDFSEPYPFL 216

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783715|ref|XP_001121916.2| PREDICTED: pantothenate kinase 2, mitochondrial-like [Apis mellifera]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 109/173 (63%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTLSKLVYFEPKD T DEA++E+ETLKNIR+YLTKN AYG TGHRDTHLQ+
Sbjct: 44  MPWFGMDIGGTLSKLVYFEPKDTTRDEADAELETLKNIRRYLTKNSAYGKTGHRDTHLQM 103

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               QEVN
Sbjct: 104 DNVCIRGRRGTLHFIRFPTSEMGNFLALARSKGMANLVTTVCATGGGAYKFENNFKQEVN 163

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYW++ T ++KC KV YDF+ PYPF+
Sbjct: 164 MNLAKFDELDSLIRGMLYIETTNPHECYYWSHPTDDNKCQKVPYDFSEPYPFL 216

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866241|ref|XP_003708579.1| PREDICTED: pantothenate kinase 1-like [Megachile rotundata]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 109/173 (63%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTLSKLVYFEPKDIT DEAN+E+ETLKNIR+YLTKN AYG TG+RDTHLQ+
Sbjct: 38  MPWFGMDIGGTLSKLVYFEPKDITRDEANAEVETLKNIRRYLTKNSAYGKTGYRDTHLQM 97

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               QEVN
Sbjct: 98  DNVCIRGRRGTLHFIRFPTSEMGNFLALARSKGMANLVTTVCATGGGAYKFEKNFKQEVN 157

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYW++ T + KC K+ YDF+ PYPF+
Sbjct: 158 MNLAKFDELDSLIRGMLYIETTNPHECYYWSHPTDDSKCHKIPYDFSEPYPFL 210

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380024634|ref|XP_003696098.1| PREDICTED: pantothenate kinase 2, mitochondrial-like [Apis florea]

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 109/173 (63%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTLSKLVYFEPKD T DEA++E+ETLKNIR+YLTKN AYG TGHRDTHLQ+
Sbjct: 44  MPWFGMDIGGTLSKLVYFEPKDTTRDEADAELETLKNIRRYLTKNSAYGKTGHRDTHLQM 103

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               QEVN
Sbjct: 104 DNVCIRGRRGTLHFIRFPTSEMGNFLALARSKGMANLVTTVCATGGGAYKFENNFKQEVN 163

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYW++ T ++KC KV YDF+ PYPF+
Sbjct: 164 MNLAKFDELDSLIRGMLYIETTNPHECYYWSHPTDDNKCQKVPYDFSEPYPFL 216

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282403503|ref|NP_001164147.1| fumble isoform 1 [Tribolium castaneum]

 Score =  176 bits (446), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 112/174 (64%), Gaps = 30/174 (17%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQ- 59
           MPWFGMDIGG+L KLVYFEPKDIT DEA+SE+ETL+NIR+YLTKN AYG TGHRDTHLQ 
Sbjct: 42  MPWFGMDIGGSLCKLVYFEPKDITKDEADSEVETLRNIRRYLTKNSAYGKTGHRDTHLQM 101

Query: 60  ----VLYTTLTLLCIELISDDTVVDFIRVIMRI------------------------QEV 91
               +     TL  I   S + +V+F+ +                            +EV
Sbjct: 102 DDVYIRGRRGTLHFIRFPSSE-MVNFLALAKSKGMANLVTTVCATGGGAFKFEEDFRREV 160

Query: 92  NMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           NMKLEK DE D L++G+ F +A  P ECYYWAN T +  C+KV+YDF+NPYPF+
Sbjct: 161 NMKLEKFDEFDSLLKGLQFADAQNPSECYYWANPTDDACCSKVKYDFSNPYPFL 214

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340725581|ref|XP_003401147.1| PREDICTED: pantothenate kinase 1-like [Bombus terrestris]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 108/173 (62%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTLSKLVYFEPKDIT DEA++E+ETLKNIR+YLT+N AYG TGHRDTHLQ+
Sbjct: 38  MPWFGMDIGGTLSKLVYFEPKDITRDEADAEVETLKNIRRYLTRNSAYGKTGHRDTHLQM 97

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               QEVN
Sbjct: 98  DNVCIRGRRGTLHFIRFPTSEMGNFLALARSKGMANLVTTVCATGGGAYKFEKNFKQEVN 157

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DELD LIRGML+IE   P ECYYW+  T + KC KV YDF+ PYPF+
Sbjct: 158 MNLAKFDELDSLIRGMLYIETTNPHECYYWSYPTDDSKCQKVPYDFSEPYPFL 210

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282403505|ref|NP_001164149.1| fumble isoform 2 [Tribolium castaneum]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 112/174 (64%), Gaps = 30/174 (17%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQ- 59
           MPWFGMDIGG+L KLVYFEPKDIT DEA+SE+ETL+NIR+YLTKN AYG TGHRDTHLQ 
Sbjct: 42  MPWFGMDIGGSLCKLVYFEPKDITKDEADSEVETLRNIRRYLTKNSAYGKTGHRDTHLQM 101

Query: 60  ----VLYTTLTLLCIELISDDTVVDFIRVIMRI------------------------QEV 91
               +     TL  I   S + +V+F+ +                            +EV
Sbjct: 102 DDVYIRGRRGTLHFIRFPSSE-MVNFLALAKSKGMANLVTTVCATGGGAFKFEEDFRREV 160

Query: 92  NMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           NMKLEK DE D L++G+ F +A  P ECYYWAN T +  C+KV+YDF+NPYPF+
Sbjct: 161 NMKLEKFDEFDSLLKGLQFADAQNPSECYYWANPTDDACCSKVKYDFSNPYPFL 214

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|282403501|ref|NP_001164148.1| fumble isoform 3 [Tribolium castaneum] gi|270002881|gb|EEZ99328.1| fumble [Tribolium castaneum]

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 112/174 (64%), Gaps = 30/174 (17%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQ- 59
           MPWFGMDIGG+L KLVYFEPKDIT DEA+SE+ETL+NIR+YLTKN AYG TGHRDTHLQ 
Sbjct: 10  MPWFGMDIGGSLCKLVYFEPKDITKDEADSEVETLRNIRRYLTKNSAYGKTGHRDTHLQM 69

Query: 60  ----VLYTTLTLLCIELISDDTVVDFIRVIMRI------------------------QEV 91
               +     TL  I   S + +V+F+ +                            +EV
Sbjct: 70  DDVYIRGRRGTLHFIRFPSSE-MVNFLALAKSKGMANLVTTVCATGGGAFKFEEDFRREV 128

Query: 92  NMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           NMKLEK DE D L++G+ F +A  P ECYYWAN T +  C+KV+YDF+NPYPF+
Sbjct: 129 NMKLEKFDEFDSLLKGLQFADAQNPSECYYWANPTDDACCSKVKYDFSNPYPFL 182

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307172941|gb|EFN64106.1| Pantothenate kinase 1 [Camponotus floridanus]

 Score =  175 bits (444), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 91/173 (52%), Positives = 106/173 (61%), Gaps = 28/173 (16%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
           MPWFGMDIGGTL KLVYFEPKDIT DEAN+E+ETLKNIR+YLTKN AYG TGHRDTHLQ+
Sbjct: 43  MPWFGMDIGGTLCKLVYFEPKDITRDEANAEVETLKNIRRYLTKNSAYGKTGHRDTHLQM 102

Query: 61  -------LYTTLTLL---------CIELISDDTVVDFIRVIMRI------------QEVN 92
                     TL  +          + L     + + +  +               +EVN
Sbjct: 103 NNVRIRGRQGTLHFIRFPTSEMGNFLALAKSKGMANLVTTVCATGGGAFKFEDNFKKEVN 162

Query: 93  MKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           M L K DEL  LIRGML+IE   P ECYYW+N T   KC KV YDF+ PYPF+
Sbjct: 163 MNLAKFDELHSLIRGMLYIETTNPHECYYWSNPTDNSKCQKVPYDFSEPYPFL 215

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
FB|FBgn0011205	512	fbl "fumble" [Drosophila melan	0.408	0.117	0.8	1.2e-35
UNIPROTKB|F1P3P8	272	PANK2 "Uncharacterized protein	0.435	0.235	0.718	1.1e-33
UNIPROTKB|E1BS92	366	PANK1 "Uncharacterized protein	0.435	0.174	0.687	1e-32
UNIPROTKB|F1LT70	456	Pank2 "Protein Pank2" [Rattus	0.435	0.140	0.703	1.3e-32
UNIPROTKB|Q08DA5	370	PANK3 "Pantothenate kinase 3"	0.435	0.172	0.687	1.9e-32
UNIPROTKB|E2QVM2	370	PANK3 "Uncharacterized protein	0.435	0.172	0.687	1.9e-32
UNIPROTKB|F6XSN6	370	PANK3 "Uncharacterized protein	0.435	0.172	0.687	1.9e-32
UNIPROTKB|Q9H999	370	PANK3 "Pantothenate kinase 3"	0.435	0.172	0.687	1.9e-32
UNIPROTKB|F1RR90	370	PANK3 "Uncharacterized protein	0.435	0.172	0.687	1.9e-32
MGI|MGI:2387464	370	Pank3 "pantothenate kinase 3"	0.435	0.172	0.687	1.9e-32

FB|FBgn0011205 fbl "fumble" [Drosophila melanogaster (taxid:7227)]

 Score = 268 (99.4 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
 Identities = 48/60 (80%), Positives = 53/60 (88%)

Query:     1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
             MPWFGMDIGGTL+KLVYFEPKDITPDE + E   L+NIR+YLTKN AYG TGHRDTHLQ+
Sbjct:   112 MPWFGMDIGGTLTKLVYFEPKDITPDEQDREAGILRNIRRYLTKNSAYGKTGHRDTHLQM 171

GO:0007283 "spermatogenesis" evidence=IMP

GO:0000910 "cytokinesis" evidence=IMP;NAS

GO:0004594 "pantothenate kinase activity" evidence=ISS;ISA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IMP

GO:0007067 "mitosis" evidence=IMP

GO:0007126 "meiosis" evidence=IMP

GO:0016044 "cellular membrane organization" evidence=IEP

GO:0005819 "spindle" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA;ISA

GO:0070328 "triglyceride homeostasis" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

GO:0048477 "oogenesis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

UNIPROTKB|F1P3P8 PANK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 245 (91.3 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 46/64 (71%), Positives = 52/64 (81%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFG+DIGGTL KLVYFEPKDIT +E + E+E LKNIRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGLDIGGTLVKLVYFEPKDITAEEEDEEVENLKNIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0005524 "ATP binding" evidence=IEA

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BS92 PANK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 238 (88.8 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++ 
Sbjct:     5 PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 64

Query:    62 YTTL 65
               T+
Sbjct:    65 NLTM 68

GO:0005524 "ATP binding" evidence=IEA

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0071944 "cell periphery" evidence=IEA

UNIPROTKB|F1LT70 Pank2 "Protein Pank2" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 45/64 (70%), Positives = 52/64 (81%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFG+DIGGTL KLVYFEPKDIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    98 PWFGLDIGGTLVKLVYFEPKDITAEEEKEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 157

Query:    62 YTTL 65
               TL
Sbjct:   158 DLTL 161

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

UNIPROTKB|Q08DA5 PANK3 "Pantothenate kinase 3" [Bos taurus (taxid:9913)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2QVM2 PANK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

UNIPROTKB|F6XSN6 PANK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

UNIPROTKB|Q9H999 PANK3 "Pantothenate kinase 3" [Homo sapiens (taxid:9606)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0005524 "ATP binding" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

UNIPROTKB|F1RR90 PANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004594 "pantothenate kinase activity" evidence=IEA

MGI|MGI:2387464 Pank3 "pantothenate kinase 3" [Mus musculus (taxid:10090)]

 Score = 229 (85.7 bits), Expect = 1.9e-32, Sum P(2) = 1.9e-32
 Identities = 44/64 (68%), Positives = 50/64 (78%)

Query:     2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
             PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct:    12 PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 71

Query:    62 YTTL 65
               TL
Sbjct:    72 DLTL 75

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0004594 "pantothenate kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015937 "coenzyme A biosynthetic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1.33	LOW CONFIDENCE prediction!
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	147
pfam03630	329	pfam03630, Fumble, Fumble	1e-26
TIGR00555	296	TIGR00555, panK_eukar, pantothenate kinase, eukary	9e-08

>gnl|CDD|217646 pfam03630, Fumble, Fumble

 Score =  101 bits (253), Expect = 1e-26
 Identities = 51/156 (32%), Positives = 79/156 (50%), Gaps = 21/156 (13%)

Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
               +DIGGTL KLVYF P DI+PDE +SE  +LKNI     +         R   ++  
Sbjct: 1   SHVAIDIGGTLIKLVYFSPVDISPDEESSEGHSLKNILSQERRG--------RLHFIKFE 52

Query: 62  YTTLTLLCIELISDDTVVDFIRVIM-----------RIQEV-NMKLEKCDELDCLIRGML 109
            T + L  +E + +  +     V+              +E  N+KL+K DE+DCLI+G+ 
Sbjct: 53  TTDIDL-FLEFLKEKLLNKLTTVLCATGGGAYKFEELFRENLNVKLQKEDEMDCLIQGLN 111

Query: 110 FIEANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           F+  N P EC+ ++N T  +K    Q +  + YP++
Sbjct: 112 FLLKNIPAECFTYSNDTDGEKTEFQQINNDDLYPYL 147

Fumble is required for cell division in Drosophila. Mutants lacking fumble exhibit abnormalities in bipolar spindle organisation, chromosome segregation, and contractile ring formation. Analyses have demonstrated that encodes three protein isoforms, all of which contain a domain with high similarity to the pantothenate kinases of A. nidulans and mouse. A role of fumble in membrane synthesis has been proposed. Length = 329

>gnl|CDD|233021 TIGR00555, panK_eukar, pantothenate kinase, eukaryotic/staphyloccocal type

 Score = 49.3 bits (118), Expect = 9e-08
 Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 41/153 (26%)

Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
              G+DIGGTL K+VY E                K  RK+ T       T + D  ++ L
Sbjct: 1   SRIGIDIGGTLIKVVYEE---------------KKGRRKFKTFE-----TTNIDKFIEWL 40

Query: 62  ------YTTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFI---E 112
                 ++ +T LC          + I     IQ     L K DE D LI+G+ ++   E
Sbjct: 41  KNQIHRHSRITTLCATGGGAFKFAELIYESAGIQ-----LHKFDEFDALIQGLNYLLKEE 95

Query: 113 ANYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
                  Y         +C K   D  + YP++
Sbjct: 96  PKEKFTYYD-------FECQKKPIDLDDIYPYL 121

This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
KOG2201|consensus	371		100.0
PF03630	341	Fumble: Fumble ; InterPro: IPR004567 Pantothenate	100.0
PLN02920	398	pantothenate kinase 1	99.96
PTZ00297	1452	pantothenate kinase; Provisional	99.96
PLN02902	876	pantothenate kinase	99.95
COG5146	342	PanK Pantothenate kinase, acetyl-CoA regulated [Co	99.83
TIGR00555	279	panK_eukar pantothenate kinase, eukaryotic/staphyl	99.79
PRK13317	277	pantothenate kinase; Provisional	99.02
smart00732	99	YqgFc Likely ribonuclease with RNase H fold. YqgF	91.31
TIGR03286	404	methan_mark_15 putative methanogenesis marker prot	90.35
PF05378	176	Hydant_A_N: Hydantoinase/oxoprolinase N-terminal r	87.22
PRK13318	258	pantothenate kinase; Reviewed	86.26
PRK13321	256	pantothenate kinase; Reviewed	85.57

>KOG2201|consensus

Probab=100.00  E-value=4.1e-40  Score=280.41  Aligned_cols=126  Identities=40%  Similarity=0.740  Sum_probs=117.1

Q ss_pred             CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHH
Q psy3290           1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVD   80 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~   80 (147)
                      +|||||||||||+|||||+|.+++++++++++          ++|.+||+++++|         .||||++|+|.+ |+.
T Consensus        22 ~~~~~~DigGtl~KlvY~s~~~~~~~~~~~~~----------~~n~~~~~~~~~~---------~rl~~~~~e~~~-~~~   81 (371)
T KOG2201|consen   22 ISHFAMDIGGTLVKLVYFSPVDISPEEEESEV----------ILNGAYGKTGYRD---------GRLHFINFETFK-IDG   81 (371)
T ss_pred             CceEEEecCCcEEEEEEEecCCCCcchhhhhc----------ccccccccccccc---------cEEEEEEeeecC-ccc
Confidence            58999999999999999999998887654432          6899999999887         589999999999 999


Q ss_pred             HHHHH-------------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCceEEeeCCCCcc
Q psy3290          81 FIRVI-------------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVED  129 (147)
Q Consensus        81 fi~~~-------------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~ft~~~~~~~~  129 (147)
                      ||+||                               +|+++|+|+++|+|||+|||+|+||+++++|+|||||+++.+++
T Consensus        82 ~L~Fi~~~~~~~~~k~~~~~~~~i~aTGGGA~Kf~d~~~~~l~v~l~k~Dem~~LI~G~~f~l~~i~~E~fty~~~~~~~  161 (371)
T KOG2201|consen   82 CLNFIRFNITDHPVKNFSKLTTVICATGGGAYKFEDLFREILDVKLDKEDEMDCLIKGLNFLLSNIPAECFTYENDEDEE  161 (371)
T ss_pred             hhHHhhcchhhccccccccceeEEEEeCCcceeHHHHHHHHhCceEeehhHHHHHHhhhHHHHhcCccceEEEecCCCcc
Confidence            99999                               88999999999999999999999999999999999999999999


Q ss_pred             ceeeecCCCCCCccccC
Q psy3290         130 KCTKVQYDFTNPYPFIY  146 (147)
Q Consensus       130 ~~~~~~~~~~~~YPyLL  146 (147)
                      .+++.+++.++||||||
T Consensus       162 ~~~~~~~~~d~~yPyLL  178 (371)
T KOG2201|consen  162 VEFQTNFCLDSPYPYLL  178 (371)
T ss_pred             eecccCCccCCCCceEE
Confidence            99999999999999998

>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway

Probab=100.00  E-value=9.1e-37  Score=261.44  Aligned_cols=130  Identities=32%  Similarity=0.607  Sum_probs=101.3

Q ss_pred             ceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHHH
Q psy3290           3 WFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFI   82 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~fi   82 (147)
                      ||||||||||+|||||+|.+.+.++.+++..+++++++...             ..+......+|||++|||++ |++||
T Consensus         2 ~faiDIGGTL~KlVYfs~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~g~L~Fi~FeT~~-ie~~i   67 (341)
T PF03630_consen    2 HFAIDIGGTLVKLVYFSPVDSSPDNQDKEDDSLRSLRREMH-------------EIESKERGGRLHFIKFETKN-IEECI   67 (341)
T ss_dssp             EEEEEE-SSEEEEEEEEESS--CHHHHHCHHHHHHHHH-EE-------------EEEETTEEEEEEEEEEEGGG-HHHHH
T ss_pred             eEEEEcCCceEEEEEEeecCCCcccccccccchhhhhhhhc-------------cccccCcCCEEEEEEechhh-HHHHH
Confidence            99999999999999999998766554445555555554210             11222334599999999999 99999


Q ss_pred             HHH-----------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCceEEeeCCCCccceee
Q psy3290          83 RVI-----------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTK  133 (147)
Q Consensus        83 ~~~-----------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~ft~~~~~~~~~~~~  133 (147)
                      +|+                             +|++++|++++|+|||+|||+|++|+++++|+|||+|+++.++++.++
T Consensus        68 ~fi~~~~~~~~~~~~~~~~I~aTGGGA~Ky~~~~~~~Lgv~v~K~DEm~clI~Gl~fLl~~i~~E~f~y~~~~~~~~~~~  147 (341)
T PF03630_consen   68 DFIKENILEHKGISQKITKICATGGGAFKYADLFKEKLGVEVQKEDEMECLIKGLNFLLKNIPDEVFTYDNDEDPEKFEK  147 (341)
T ss_dssp             HHHHHS--S-TTGGGCSSEEEEESTTHHHHHCHHHCTSTSEEEE--HHHHHHHHHHHHHHTTB-SEEEEETTTSTTT-EE
T ss_pred             HHHHHhhhhccccCccceEEEEeCCcHHHHHHHHHHhcCCCeeEehHHHHHHhhHHHHHhcCCcceEEEecCCCcceecc
Confidence            999                             688899999999999999999999999999999999999888887777


Q ss_pred             ecCCCCCCccccC
Q psy3290         134 VQYDFTNPYPFIY  146 (147)
Q Consensus       134 ~~~~~~~~YPyLL  146 (147)
                      ++.+.+++|||||
T Consensus       148 ~~~~~~~~~Pyll  160 (341)
T PF03630_consen  148 VPIDNSDIYPYLL  160 (341)
T ss_dssp             EEETTSS-SSEEE
T ss_pred             cccCCCCCCcEEE
Confidence            7888899999997

CoA is a ubiquitous and essential cofactor in all living organsims. Pantothenate kinase catalyses the first and rate limiting step in the CoA biosynthetic pathway, which involves transferring a phosphoryl group from ATP to pantothenate, also known as vitamin B5. Three distinct types of pantothenate kinase enzymes have been identified: type I PanK enzymes are typified by the E. coli CoaA protein, type II enzymes are primarily found in eukaryotic organisms whilst type III enzymes have a wider phylogenic distribution and are not feedback inhibited by CoA []. This family describes the type II (primarily eukaryotic) form of pantothenate kinase PanK, characterised from the fungus Emericella nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from type I PanK enzymes and shows little sequence similarity [, ].; GO: 0004594 pantothenate kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process; PDB: 3SMP_B 2I7N_B 2EWS_B 2I7P_C 3SMS_A 3MK6_D.

>PLN02920 pantothenate kinase 1

Probab=99.96  E-value=7.7e-30  Score=221.95  Aligned_cols=116  Identities=24%  Similarity=0.437  Sum_probs=92.0

Q ss_pred             CceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHH
Q psy3290           2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDF   81 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~f   81 (147)
                      .||||||||||+|||||++........+.               ..+.         .......||||++|||.+ |++|
T Consensus        19 ~~~a~Diggsl~Klvy~~~~~~~~~~~~~---------------~~~~---------~~~~~~g~l~F~~F~T~~-i~~~   73 (398)
T PLN02920         19 SHLALDIGGSLIKLVYFSRNSGDSEDPRN---------------DSSV---------KSDGVNGRLHFAKFETRK-INDC   73 (398)
T ss_pred             eEEEEEcCCceEEEEEEeccCCccccccc---------------cccc---------cccCCCceEEEEEecccC-HHHH
Confidence            69999999999999999987643322110               0000         001223599999999999 9999


Q ss_pred             HHHH-----------------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCceEEeeCCC
Q psy3290          82 IRVI-----------------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANST  126 (147)
Q Consensus        82 i~~~-----------------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~ft~~~~~  126 (147)
                      |+|+                                   .|++++|++++|+|||+|||+|++|+++++|+|||||.++.
T Consensus        74 i~fl~~~~~~~~~~~~~~~~~~~~~~i~~TGGGA~k~~~~~~~~~~i~~~k~DEm~~li~Gl~fLl~~~~~e~f~y~~~~  153 (398)
T PLN02920         74 LEFISSNKLHHGGFQHHENPTHDKNFIKATGGGAYKFADLFKEKLGISLDKEDEMDCLVTGANFLLKAVHHEAFTYLDGQ  153 (398)
T ss_pred             HHHHHhccccccccccccccCCCceEEEEECCcHHHHHHHHHhhhCCCceeecHHHHHHHHHHHHHhhCCcceeEeccCc
Confidence            9998                                   56788999999999999999999999999999999998743


Q ss_pred             CccceeeecCCCCCCccccC
Q psy3290         127 VEDKCTKVQYDFTNPYPFIY  146 (147)
Q Consensus       127 ~~~~~~~~~~~~~~~YPyLL  146 (147)
                      .    ++++.+.+++|||||
T Consensus       154 ~----~~~~~~~~~lyPyLL  169 (398)
T PLN02920        154 K----EFVQIDHNDLYPYLL  169 (398)
T ss_pred             c----cccccCccccCceEE
Confidence            2    345667778999997

>PTZ00297 pantothenate kinase; Provisional

Probab=99.96  E-value=4.8e-29  Score=243.23  Aligned_cols=130  Identities=22%  Similarity=0.324  Sum_probs=107.8

Q ss_pred             eEEeecCceeEEEEeeeCC--CCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeec-------------ceeeEE
Q psy3290           4 FGMDIGGTLSKLVYFEPKD--ITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLY-------------TTLTLL   68 (147)
Q Consensus         4 faiDIGGTL~KlVYf~~~~--~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~-------------~t~~Lh   68 (147)
                      ++||||||+|||||++|+.  ..++...+|+++|+            ++.|+|+.|+..+.             ..++||
T Consensus      1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 1109 (1452)
T PTZ00297       1042 VTIDIGGTFAKIAYVQPPGGFAFPTYIVHEASSLS------------EKLGLRTFHFFADAEAAESELRTRPHSRVGTLR 1109 (1452)
T ss_pred             eEEecCceeEEEEEEeCCCCCCCcchhhhhhhhhh------------hccCccccccccChHHhhhhhccCCCCCceEEE
Confidence            6899999999999999983  23333346766664            55799998887764             335999


Q ss_pred             EEEecchhhHHHHHHHH-----------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCce
Q psy3290          69 CIELISDDTVVDFIRVI-----------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLEC  119 (147)
Q Consensus        69 FikFeT~~~i~~fi~~~-----------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~  119 (147)
                      |+||||.+ |++||+|+                             +|++.+|+++.|+|||+|||+|++|+++++|+|+
T Consensus      1110 f~~f~t~~-i~~~~~~l~~~~~~~~~~~~~~~~i~~TGGGA~k~~~~~~~~~~~~~~~~dEm~~li~G~~~l~~~~~~~~ 1188 (1452)
T PTZ00297       1110 FAKIPSKQ-IPDFADYLAGSHAINYYKPQYRTKVRATGGGAFKYASVAKKVLGINFSVMREMDAVVKGLNLVIRVAPESI 1188 (1452)
T ss_pred             EEEecccC-HHHHHHHHHhhhhhcccCcCCceEEEEeCCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHHhcCCceE
Confidence            99999999 99999999                             5688899999999999999999999999999999


Q ss_pred             EEeeCCCC---ccceeeecCCCCCCccccC
Q psy3290         120 YYWANSTV---EDKCTKVQYDFTNPYPFIY  146 (147)
Q Consensus       120 ft~~~~~~---~~~~~~~~~~~~~~YPyLL  146 (147)
                      |||+...+   ++++++.+.+.+++|||||
T Consensus      1189 f~~~~~~~~~~~~~~~~~~~~~~~~yp~ll 1218 (1452)
T PTZ00297       1189 FTVDPSTGVHHPHQLVSPPGDGFSPFPCLL 1218 (1452)
T ss_pred             EEeccccccccccccccCccccCCCCceEE
Confidence            99987432   3456666677789999998

>PLN02902 pantothenate kinase

Probab=99.95  E-value=4.6e-28  Score=225.80  Aligned_cols=128  Identities=23%  Similarity=0.408  Sum_probs=93.9

Q ss_pred             CceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHH
Q psy3290           2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDF   81 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~f   81 (147)
                      .|+|+||||||+|||||++......+..... +.+..++.-        .+.|.   ..+....|||||+|||.+ |++|
T Consensus        54 ~h~~~digg~l~klvy~s~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~---~~~~~~grl~F~~fet~~-~~~~  120 (876)
T PLN02902         54 SHLALDIGGSLIKLVYFSRHEDRSTDDKRKR-TIKERLGIT--------NGNRR---SYPILGGRLHFVKFETSK-INEC  120 (876)
T ss_pred             eeEEEecCCceEEEEEEeccCCccccccccc-ccccccccc--------ccccc---cccCCCceEEEEEcCccc-HHHH
Confidence            5999999999999999999754322211000 000000000        01111   112234599999999999 9999


Q ss_pred             HHHH-------------------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCceEEeeC
Q psy3290          82 IRVI-------------------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWAN  124 (147)
Q Consensus        82 i~~~-------------------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~ft~~~  124 (147)
                      |+|+                                     .|++++|++++|+|||+|||+|++|+++++|+|||||.+
T Consensus       121 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~i~aTGGGA~K~~~~~~~~l~~~l~k~DEm~~li~Gl~fLl~~i~~e~f~~~~  200 (876)
T PLN02902        121 LDFISSKQLHRGGIHSWLSKAPPNGNGVIKATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHME  200 (876)
T ss_pred             HHHHHHhcccccchhhhccccCCCCceEEEEeCCccccHHHHHHHHhCCCeeeecHHHHHHHHHHHHHhhCcchheeecc
Confidence            9999                                     678999999999999999999999999999999999975


Q ss_pred             CCCccceeeecCCCCCCccccC
Q psy3290         125 STVEDKCTKVQYDFTNPYPFIY  146 (147)
Q Consensus       125 ~~~~~~~~~~~~~~~~~YPyLL  146 (147)
                      ..    .++++.+..++|||||
T Consensus       201 ~~----~~~~~~~~~~lyPyLL  218 (876)
T PLN02902        201 GE----KEFVQIDQNDLFPYLL  218 (876)
T ss_pred             cc----ccccccCccCCCceEE
Confidence            32    3556677789999997

>COG5146 PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism]

Probab=99.83  E-value=4.1e-21  Score=160.04  Aligned_cols=101  Identities=22%  Similarity=0.354  Sum_probs=81.1

Q ss_pred             ceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHHH
Q psy3290           3 WFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFI   82 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~fi   82 (147)
                      ++||||||||||+|| ||..+                                         -||.|..+||.+ |++|+
T Consensus        20 ~vaiDiGGtLaKvv~-sp~~s-----------------------------------------nrl~F~t~eT~k-Id~~v   56 (342)
T COG5146          20 KVAIDIGGTLAKVVQ-SPSQS-----------------------------------------NRLTFKTEETKK-IDQVV   56 (342)
T ss_pred             EEEEecCceeeeeee-Ccccc-----------------------------------------cceeeehHhhhh-HHHHH
Confidence            579999999999999 43210                                         178999999999 99999


Q ss_pred             HHH-----------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCCceEEeeCCCCccceee
Q psy3290          83 RVI-----------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPLECYYWANSTVEDKCTK  133 (147)
Q Consensus        83 ~~~-----------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~E~ft~~~~~~~~~~~~  133 (147)
                      +++                             ...+.+.+++.+++||+|||.||||+..+||+|+|++.+.+..-..+-
T Consensus        57 e~l~~li~~h~k~C~~~~~liatGGga~kfyd~m~~~~~ikv~r~~eme~li~gl~~fv~~IP~evFv~~d~~~e~~~~~  136 (342)
T COG5146          57 EWLNNLIQQHEKLCLTKITLIATGGGAYKFYDRMSKQLDIKVIRENEMEILINGLNYFVINIPAEVFVEFDAASEGLGIL  136 (342)
T ss_pred             HHHHHHHHHHHhhhhheeeEEecCCcchhhHHHHhhhccceeeecchHHHHHhcccceeeeccHHHeeeeccccchhhhh
Confidence            998                             345789999999999999999999999999999999998543211111


Q ss_pred             ecCCCCCCccccC
Q psy3290         134 VQYDFTNPYPFIY  146 (147)
Q Consensus       134 ~~~~~~~~YPyLL  146 (147)
                      ..-...++|||||
T Consensus       137 ~~~~~h~lypyil  149 (342)
T COG5146         137 LKEQGHDLYPYIL  149 (342)
T ss_pred             hhhccccccceee
Confidence            1223367999997

>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type

Probab=99.79  E-value=2.1e-19  Score=150.84  Aligned_cols=72  Identities=33%  Similarity=0.548  Sum_probs=63.7

Q ss_pred             CceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHH
Q psy3290           2 PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDF   81 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~f   81 (147)
                      +|+|||||||++|+||++..                                           .++||++|||.+ +++|
T Consensus         1 ~~iGiDiGgT~~Kiv~~~~~-------------------------------------------~~~~f~~~~~~~-~~~~   36 (279)
T TIGR00555         1 SRIGIDIGGTLIKVVYEEPK-------------------------------------------GRRKFKTFETTN-IDKF   36 (279)
T ss_pred             CeEEEEeCcceEEEEEEcCC-------------------------------------------CcEEEEEeeccc-HHHH
Confidence            58999999999999998631                                           269999999999 9999


Q ss_pred             HHHH-------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCC
Q psy3290          82 IRVI-------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPL  117 (147)
Q Consensus        82 i~~~-------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~  117 (147)
                      ++|+                         .|+..+|++++|+|||+|+++|++|++.+.|+
T Consensus        37 ~~~l~~~~~~~~~~~~i~~TGgGa~k~~~~~~~~~~v~~~k~dE~~a~~~g~~~ll~~~~~   97 (279)
T TIGR00555        37 IEWLKNQIHRHSRITTLCATGGGAFKFAELIYESAGIQLHKFDEFDALIQGLNYLLKEEPK   97 (279)
T ss_pred             HHHHHHHHHhhcCceEEEEECCcHHHHHHHhccccCCcccchhHHHHHHHHHHHHhhcccC
Confidence            9999                         45666789999999999999999999987765

This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).

>PRK13317 pantothenate kinase; Provisional

Probab=99.02  E-value=9.8e-10  Score=92.13  Aligned_cols=69  Identities=23%  Similarity=0.289  Sum_probs=55.4

Q ss_pred             ceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHHH
Q psy3290           3 WFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFI   82 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~fi   82 (147)
                      ++|||||||++|+||+....                                           +++|.+|.+.. .+.++
T Consensus         4 ~iGIDiGstt~K~v~~~~~~-------------------------------------------~~~~~~~~~~~-~~~~~   39 (277)
T PRK13317          4 KIGIDAGGTLTKIVYLEEKK-------------------------------------------QRTFKTEYSAE-GKKVI   39 (277)
T ss_pred             eEEEEeCcccEEEEEEcCCC-------------------------------------------eEEEEeeccHH-HHHHH
Confidence            58999999999999998421                                           35677777777 77777


Q ss_pred             HHH-----------------HHHH--HcCCceeeechhhhhhhhhhhhhhhC
Q psy3290          83 RVI-----------------MRIQ--EVNMKLEKCDELDCLIRGMLFIEANY  115 (147)
Q Consensus        83 ~~~-----------------~f~~--~lgv~l~k~DEMecLI~Gl~fll~~i  115 (147)
                      +++                 .+.+  .+|+++.|.|||+|+++|++|++++.
T Consensus        40 ~~l~~~~~~~~i~~TG~g~~~~~~~~~~~~~~~~v~E~~a~~~g~~~l~~~~   91 (277)
T PRK13317         40 DWLINLQDIEKICLTGGKAGYLQQLLNYGYPIAEFVEFEATGLGVRYLLKEE   91 (277)
T ss_pred             HHhhccCCceEEEEECcchhhhhHHHhcCCCeeeeHHHHHHHHHHHHHHHhc
Confidence            775                 4444  48999999999999999999998543

>smart00732 YqgFc Likely ribonuclease with RNase H fold

Probab=91.31  E-value=0.21  Score=34.25  Aligned_cols=21  Identities=14%  Similarity=0.164  Sum_probs=17.9

Q ss_pred             CCceEEeecCceeEEEEeeeC
Q psy3290           1 MPWFGMDIGGTLSKLVYFEPK   21 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~~   21 (147)
                      |-.+|+|||||-+|++...+.
T Consensus         1 ~~ilgiD~Ggt~i~~a~~d~~   21 (99)
T smart00732        1 KRVLGLDPGRKGIGVAVVDET   21 (99)
T ss_pred             CcEEEEccCCCeEEEEEECCC
Confidence            346899999999999999764

YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15

Probab=90.35  E-value=1.2  Score=39.82  Aligned_cols=26  Identities=12%  Similarity=0.133  Sum_probs=19.4

Q ss_pred             echhhhhhhhhhhhhhhCCCceEEee
Q psy3290          98 CDELDCLIRGMLFIEANYPLECYYWA  123 (147)
Q Consensus        98 ~DEMecLI~Gl~fll~~i~~E~ft~~  123 (147)
                      ..|+.|..+|..|+..+.|+...-.+
T Consensus       222 v~EItaha~GA~~L~p~~~~v~TIID  247 (404)
T TIGR03286       222 QEELTVNSKGAVYLADKQEGPATVID  247 (404)
T ss_pred             EEEEhhHHHHHHHhcccCCCCcEEEE
Confidence            79999999999999765555443333

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.

>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family

Probab=87.22  E-value=0.49  Score=37.12  Aligned_cols=18  Identities=33%  Similarity=0.824  Sum_probs=16.9

Q ss_pred             eEEeecCceeEEEEeeeC
Q psy3290           4 FGMDIGGTLSKLVYFEPK   21 (147)
Q Consensus         4 faiDIGGTL~KlVYf~~~   21 (147)
                      +|||+|||.+-.|.+.+.
T Consensus         2 igIDvGGT~TD~v~~d~~   19 (176)
T PF05378_consen    2 IGIDVGGTFTDAVLLDED   19 (176)
T ss_pred             eeEecCCCcEEEEEEeCC
Confidence            799999999999999985

>PRK13318 pantothenate kinase; Reviewed

Probab=86.26  E-value=0.62  Score=38.14  Aligned_cols=17  Identities=24%  Similarity=0.507  Sum_probs=15.8

Q ss_pred             ceEEeecCceeEEEEee
Q psy3290           3 WFGMDIGGTLSKLVYFE   19 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~   19 (147)
                      .++||||||-+|...|.
T Consensus         2 iL~IDIGnT~iK~al~d   18 (258)
T PRK13318          2 LLAIDVGNTNTVFGLYE   18 (258)
T ss_pred             EEEEEECCCcEEEEEEE
Confidence            57999999999999997

>PRK13321 pantothenate kinase; Reviewed

Probab=85.57  E-value=0.75  Score=37.76  Aligned_cols=18  Identities=33%  Similarity=0.423  Sum_probs=16.3

Q ss_pred             ceEEeecCceeEEEEeee
Q psy3290           3 WFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~   20 (147)
                      +++||||||-+|+..|..
T Consensus         2 iL~IDIGnT~ik~gl~~~   19 (256)
T PRK13321          2 LLLIDVGNTNIKLGVFDG   19 (256)
T ss_pred             EEEEEECCCeEEEEEEEC
Confidence            589999999999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3sms_A	382	Human Pantothenate Kinase 3 In Complex With A Panto		2e-28
3mk6_A	376	Substrate And Inhibitor Binding To Pank Length = 37		2e-28
2i7p_A	362	Crystal Structure Of Human Pank3 In Complex With Ac		2e-28
3smp_A	386	Monoclinic Crystal Structure Of Human Pantothenate		6e-27
2i7n_A	360	Crystal Structure Of Human Pank1 Alpha: The Catalyt		6e-27

>pdb|3SMS|A Chain A, Human Pantothenate Kinase 3 In Complex With A Pantothenate Analog Length = 382

Iteration: 1
 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 103/177 (58%), Gaps = 33/177 (18%)
Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++
Sbjct: 21  FPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLEL 80
Query: 61  LYTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV------------------- 91
              TL      L  I   + D +  FI++        +Q V                   
Sbjct: 81  KDLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIG 139
Query: 92  NMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           N+ L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 140 NLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 196

>pdb|3MK6|A Chain A, Substrate And Inhibitor Binding To Pank Length = 376

Iteration: 1
 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 33/176 (18%)
Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct: 20  PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 79
Query: 62  YTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV-------------------N 92
             TL      L  I   + D +  FI++        +Q V                   N
Sbjct: 80  DLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGN 138
Query: 93  MKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           + L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 139 LHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 194

>pdb|2I7P|A Chain A, Crystal Structure Of Human Pank3 In Complex With Accoa Length = 362

Iteration: 1
 Score =  120 bits (302), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 103/176 (58%), Gaps = 33/176 (18%)
Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KL YFEP DIT +E   E+E+LK+IRKYLT N AYGSTG RD HL++ 
Sbjct: 6   PWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELK 65
Query: 62  YTTL-----TLLCIELISDDTVVDFIRV-----IMRIQEV-------------------N 92
             TL      L  I   + D +  FI++        +Q V                   N
Sbjct: 66  DLTLFGRRGNLHFIRFPTQD-LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGN 124
Query: 93  MKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           + L K DELDCL++G+L+I++   N   ECYY+AN++  ++C K+ ++  +PYP +
Sbjct: 125 LHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 180

>pdb|3SMP|A Chain A, Monoclinic Crystal Structure Of Human Pantothenate Kinase 1 Alpha Length = 386

Iteration: 1
 Score =  115 bits (289), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 93/180 (51%), Gaps = 41/180 (22%)
Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++ 
Sbjct: 26  PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 85
Query: 62  YTTL---------------------------------TLLCIELISDDTVVDFIRVIMRI 88
             T+                                 T LC          +  R+I  +
Sbjct: 86  NLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADL 145
Query: 89  QEVNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           Q     L K DELDCLI+G+L++++   N   ECYY+ N T  + C K  Y   NPYP +
Sbjct: 146 Q-----LHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 200

>pdb|2I7N|A Chain A, Crystal Structure Of Human Pank1 Alpha: The Catalytic Core Domain In Complex With Accoa Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 93/180 (51%), Gaps = 41/180 (22%)
Query: 2   PWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVL 61
           PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++ 
Sbjct: 4   PWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELK 63
Query: 62  YTTL---------------------------------TLLCIELISDDTVVDFIRVIMRI 88
             T+                                 T LC          +  R+I  +
Sbjct: 64  NLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADL 123
Query: 89  QEVNMKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           Q     L K DELDCLI+G+L++++   N   ECYY+ N T  + C K  Y   NPYP +
Sbjct: 124 Q-----LHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPML 178

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
2i7n_A	360	Pantothenate kinase 1; PANK, transferase; HET: ACO	2e-33
2ews_A	287	Pantothenate kinase; PANK, structural genomics, st	5e-04

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A* Length = 360

 Score =  119 bits (299), Expect = 2e-33
 Identities = 70/177 (39%), Positives = 92/177 (51%), Gaps = 31/177 (17%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++
Sbjct: 3   FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLEL 62

Query: 61  L----------------YTTLTLLCIELISDDTVVDFIRVIMRI------------QEVN 92
                             +      I++ S+         +                  +
Sbjct: 63  KNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIAD 122

Query: 93  MKLEKCDELDCLIRGMLFIEA---NYPLECYYWANSTVEDKCTKVQYDFTNPYPFIY 146
           ++L K DELDCLI+G+L++++   N   ECYY+ N T  + C K  Y   NPYP + 
Sbjct: 123 LQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLL 179

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14 Length = 287

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 21/135 (15%), Positives = 41/135 (30%), Gaps = 35/135 (25%)

Query: 5   GMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNK--AYGSTGHRDTHLQVLY 62
           G+D GGTL K+V  +    T        + +  + ++L + +      TG     +    
Sbjct: 24  GIDAGGTLIKIVQEQDNQRT--FKTELTKNIDQVVEWLNQQQIEKLCLTGGNAGVIA--- 78

Query: 63  TTLTLLCIELISDDTVVDFIRVIMRIQEVNMKLEKCDELDCLIRGMLFI--EANYPLECY 120
                                     + +N+  +   E D   +G+  +  E  + L  Y
Sbjct: 79  --------------------------ENINIPAQIFVEFDAASQGLGILLKEQGHDLADY 112

Query: 121 YWANSTVEDKCTKVQ 135
            +AN           
Sbjct: 113 IFANVGTGTSLHYFD 127

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
2i7n_A	360	Pantothenate kinase 1; PANK, transferase; HET: ACO	100.0
2ews_A	287	Pantothenate kinase; PANK, structural genomics, st	99.42
4ehu_A	276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	84.81
1hux_A	270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	83.34
3bex_A	249	Type III pantothenate kinase; actin-like fold, ATP	81.09

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*

Probab=100.00  E-value=2e-43  Score=303.04  Aligned_cols=145  Identities=51%  Similarity=0.865  Sum_probs=119.4

Q ss_pred             CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecce-----eeEEEEEecch
Q psy3290           1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTT-----LTLLCIELISD   75 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t-----~~LhFikFeT~   75 (147)
                      ||||||||||||+|||||+|.+++++++++++++|++|++|+++|.+||++|+||.|+++.+.+     .+|||++|||+
T Consensus         3 ~~~~~iDiGGtL~Klvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~F~~f~t~   82 (360)
T 2i7n_A            3 FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSC   82 (360)
T ss_dssp             CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEEGG
T ss_pred             CCEEEEEeCCceEEEEEEeecCCccccccccccccccchhhccccccccccCccccccccccccccCcCceEEEEEeehh
Confidence            7999999999999999999998888777778889999999999999999999999999987653     49999999999


Q ss_pred             hhHHHHHHHH------------------------HHHHHcCCceeeechhhhhhhhhhhhh---hhCCCceEEeeCCCCc
Q psy3290          76 DTVVDFIRVI------------------------MRIQEVNMKLEKCDELDCLIRGMLFIE---ANYPLECYYWANSTVE  128 (147)
Q Consensus        76 ~~i~~fi~~~------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll---~~i~~E~ft~~~~~~~  128 (147)
                      + |++|++++                        .|++++|+++.|+|||+|+++|++|++   +++|+|||||+++.++
T Consensus        83 ~-~~~~l~~~~~~~~~~~~~~i~aTGgGa~k~~~~~~~~~g~~~~k~dE~~c~~~G~~~l~~~~~~~~~e~~t~~~~~~~  161 (360)
T 2i7n_A           83 A-MHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNP  161 (360)
T ss_dssp             G-HHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHCBTTBCSEEEEESTTCT
T ss_pred             h-HHHHHHHHHHcCCCccCcEEEEECCcHHHHHHHHHHHhCCCcceecHHHHHHHHHHHHhcccccCCceeEEecccccc
Confidence            9 99999996                        567889999999999999999999999   6899999999999999


Q ss_pred             cceeeecCCCCCCccccC
Q psy3290         129 DKCTKVQYDFTNPYPFIY  146 (147)
Q Consensus       129 ~~~~~~~~~~~~~YPyLL  146 (147)
                      +++++.|++++++|||||
T Consensus       162 ~~~~~~~~~~~~~~Pyll  179 (360)
T 2i7n_A          162 ELCQKKPYCLDNPYPMLL  179 (360)
T ss_dssp             TTCEEEEECCSSCCSEEE
T ss_pred             ccccccccccccCCceEE
Confidence            999999999999999997

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14

Probab=99.42  E-value=4.6e-13  Score=111.42  Aligned_cols=71  Identities=17%  Similarity=0.230  Sum_probs=61.8

Q ss_pred             CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHH
Q psy3290           1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVD   80 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~   80 (147)
                      +.|+|||||||++|+||++.                               |             +++|.+|++.. +++
T Consensus        20 ~~~iGIDiGsTt~K~V~~~~-------------------------------~-------------~i~~~~~~~~~-~~~   54 (287)
T 2ews_A           20 HMKVGIDAGGTLIKIVQEQD-------------------------------N-------------QRTFKTELTKN-IDQ   54 (287)
T ss_dssp             -CEEEEEECSSEEEEEEECS-------------------------------S-------------CEEEEEEEGGG-HHH
T ss_pred             CeEEEEEEChhhEEEEEEcC-------------------------------C-------------EEEEEEechHH-HHH
Confidence            46899999999999999942                               1             47788999999 999


Q ss_pred             HHHHH----------------HHHHHcCCceeeechhhhhhhhhhhhhhhCC
Q psy3290          81 FIRVI----------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYP  116 (147)
Q Consensus        81 fi~~~----------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~  116 (147)
                      +++++                .+.+.+|+.+.+.|||+|+++|++|+...++
T Consensus        55 ~l~~l~~~~~~~i~~TG~G~~~~~~~l~~~~~~v~Ei~~~~~Ga~~l~~~~~  106 (287)
T 2ews_A           55 VVEWLNQQQIEKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQG  106 (287)
T ss_dssp             HHHHHHTSCCSEEEEESTTHHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhcccCceEEEEEChhHHhHhHhhCCCcceeehhHHHHHHHHHhcccCC
Confidence            99887                6677899999999999999999999998754

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A

Probab=84.81  E-value=0.51  Score=36.85  Aligned_cols=20  Identities=45%  Similarity=0.529  Sum_probs=17.4

Q ss_pred             CCceEEeecCceeEEEEeee
Q psy3290           1 MPWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~   20 (147)
                      |-.+|||+|+|.+|+|....
T Consensus         1 M~~lGID~GsT~tk~av~d~   20 (276)
T 4ehu_A            1 MYTMGLDIGSTASKGVILKN   20 (276)
T ss_dssp             CEEEEEEECSSCEEEEEEET
T ss_pred             CeEEEEEcCccEEEEEEEEC
Confidence            66789999999999998763

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5

Probab=83.34  E-value=0.73  Score=36.61  Aligned_cols=19  Identities=32%  Similarity=0.517  Sum_probs=16.4

Q ss_pred             CceEEeecCceeEEEEeee
Q psy3290           2 PWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~   20 (147)
                      -++|||||||-+|+|-+..
T Consensus         4 ~~lGiD~Gst~~k~~l~d~   22 (270)
T 1hux_A            4 YTLGIDVGSTASKCIILKD   22 (270)
T ss_dssp             EEEEEEECSSEEEEEEEET
T ss_pred             EEEEEEeccceEEEEEEeC
Confidence            3689999999999998764

>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A

Probab=81.09  E-value=0.91  Score=36.10  Aligned_cols=19  Identities=26%  Similarity=0.314  Sum_probs=16.8

Q ss_pred             CceEEeecCceeEEEEeee
Q psy3290           2 PWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~   20 (147)
                      -++++|||+|-+|+..|+.
T Consensus         4 M~L~IDIGNT~ik~gl~~~   22 (249)
T 3bex_A            4 MYLLVDVGNTHSVFSITED   22 (249)
T ss_dssp             EEEEEEECSSEEEEEEESS
T ss_pred             eEEEEEECCCeEEEEEEEC
Confidence            3789999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d2i7na1	146	c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1	6e-33
d2i7na2	212	c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1	1e-05

>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 146

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 6e-33
 Identities = 55/141 (39%), Positives = 73/141 (51%), Gaps = 28/141 (19%)

Query: 1   MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQV 60
            PWFGMDIGGTL KLVYFEPKDIT +E   E+E LK+IRKYLT N AYG TG RD HL++
Sbjct: 1   FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLEL 60

Query: 61  -------LYTTLTLLCIELISDDTVVDFIR---------VIMR------------IQEVN 92
                      L  +     +    +              +                  +
Sbjct: 61  KNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIAD 120

Query: 93  MKLEKCDELDCLIRGMLFIEA 113
           ++L K DELDCLI+G+L++++
Sbjct: 121 LQLHKLDELDCLIQGLLYVDS 141

>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 212

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (96), Expect = 1e-05
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query: 118 ECYYWANSTVEDKCTKVQYDFTNPYPFI 145
           ECYY+ N T  + C K  Y   NPYP +
Sbjct: 3   ECYYFENPTNPELCQKKPYCLDNPYPML 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d2i7na1	146	Pantothenate kinase 1, PANK1 {Human (Homo sapiens)	100.0
d2ewsa1	267	Type II pantothenate kinase, CoaW {Staphylococcus	97.32
d2gupa1	114	Hypothetical protein SP2142 {Streptococcus pneumon	94.62
d1q18a1	110	Glucokinase Glk {Escherichia coli [TaxId: 562]}	94.38
d1xc3a1	118	Putative fructokinase YhdR {Bacillus subtilis [Tax	93.82
d1huxa_	259	Hydroxyglutaryl-CoA dehydratase component A {Acida	91.86
d2ap1a2	117	Putative regulator protein YcfX {Salmonella typhim	90.95
d2aa4a1	119	N-acetylmannosamine kinase NanK {Escherichia coli	90.52
d1woqa1	129	Inorganic polyphosphate/ATP-glucomannokinase PPGMK	90.11
d1zc6a1	114	Probable N-acetylglucosamine kinase CV2896 {Chromo	90.04
d1sz2a1	319	Glucokinase Glk {Escherichia coli [TaxId: 562]}	86.81

>d2i7na1 c.55.1.14 (A:236-381) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-44  Score=274.44  Aligned_cols=114  Identities=53%  Similarity=0.839  Sum_probs=89.0

Q ss_pred             CCceEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecce-----eeEEEEEecch
Q psy3290           1 MPWFGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTT-----LTLLCIELISD   75 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t-----~~LhFikFeT~   75 (147)
                      +|||||||||||||||||||.+++.++.+++.+.+++++++++++.+||.+|+||.++++.+..     .+|||+||||+
T Consensus         1 ~p~faiDIGGSL~KlVYfsp~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~G~LhF~kFeT~   80 (146)
T d2i7na1           1 FPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVHLELKNLTMCGRKGNLHFIRFPSC   80 (146)
T ss_dssp             CCEEEEEECSSEEEEEEEEECC------------CCSHHHHHHHCSBCSSSCEECGGGCEEEEEC--CEEEEEEEEEEGG
T ss_pred             CCeEEEEeCCceEEEEEEecCCCccccccccchhhhhhhhhccccccccccCCcchhhhhccccccCCCceEEEEEeehh
Confidence            6999999999999999999999887777778888899999999999999999999999997654     49999999999


Q ss_pred             hhHHHHHHHH------------------------HHHHHcCCceeeechhhhhhhhhhhhhhhC
Q psy3290          76 DTVVDFIRVI------------------------MRIQEVNMKLEKCDELDCLIRGMLFIEANY  115 (147)
Q Consensus        76 ~~i~~fi~~~------------------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i  115 (147)
                      + |++||+|+                        +|+++|||+|+|+|||+|||+|+||+.+..
T Consensus        81 ~-i~~~l~fi~~~~~~~~~~~I~ATGGGA~Kf~~~~~~~Lgv~v~k~DEM~cLI~Gl~Fl~~~~  143 (146)
T d2i7na1          81 A-MHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRMIADLQLHKLDELDCLIQGLLYVDSVG  143 (146)
T ss_dssp             G-HHHHHHHC------------CEESTTTTGGGTTC-------CCBCCHHHHHHHHHHHHHHHC
T ss_pred             h-HHHHHHHHHhcCCCCCCcEEEEeCccHHHHHHHHHHHcCCceEeccHHHHHHHHHHHHHhhc
Confidence            9 99999998                        689999999999999999999999998643

>d2ewsa1 c.55.1.14 (A:1-267) Type II pantothenate kinase, CoaW {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Type II pantothenate kinase, CoaW
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.32  E-value=0.00055  Score=49.99  Aligned_cols=69  Identities=17%  Similarity=0.267  Sum_probs=49.2

Q ss_pred             eEEeecCceeEEEEeeeCCCCCCchhhHHHHHHHHHHHhhhcccCCCCCcccccceeecceeeEEEEEecchhhHHHHHH
Q psy3290           4 FGMDIGGTLSKLVYFEPKDITPDEANSEIETLKNIRKYLTKNKAYGSTGHRDTHLQVLYTTLTLLCIELISDDTVVDFIR   83 (147)
Q Consensus         4 faiDIGGTL~KlVYf~~~~~~~~~~~~e~~~l~~i~~~l~~n~~yg~~g~rd~~le~~~~t~~LhFikFeT~~~i~~fi~   83 (147)
                      +|||||||.+|.|.++....                                            .+-|.+++. ++++++
T Consensus         3 iGIDiGGT~ik~~lvd~~g~--------------------------------------------i~~~~~~~t-~~~i~~   37 (267)
T d2ewsa1           3 VGIDAGGTLIKIVQEQDNQR--------------------------------------------TFKTELTKN-IDQVVE   37 (267)
T ss_dssp             EEEEECSSEEEEEEECSSCE--------------------------------------------EEEEEEGGG-HHHHHH
T ss_pred             EEEEEChhhEEEEEEeCCCc--------------------------------------------EEEEEeccc-HHHHHH
Confidence            79999999999999974321                                            112344444 566666


Q ss_pred             HH----------------HHHHHcCCceeeechhhhhhhhhhhhhhhCCC
Q psy3290          84 VI----------------MRIQEVNMKLEKCDELDCLIRGMLFIEANYPL  117 (147)
Q Consensus        84 ~~----------------~f~~~lgv~l~k~DEMecLI~Gl~fll~~i~~  117 (147)
                      .+                ...+.+.....+.++..+...|..+.....+.
T Consensus        38 ~i~~~~~~~i~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (267)
T d2ewsa1          38 WLNQQQIEKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQGH   87 (267)
T ss_dssp             HHHTSCCSEEEEESTTHHHHHTTSSSCCEECCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHhhhhheeeecccccccchheeccccccchHHHHHHHhhhhhhhcCC
Confidence            55                55677888899999999999998877654443

>d2gupa1 c.55.1.10 (A:1-114) Hypothetical protein SP2142 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Hypothetical protein SP2142
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.62  E-value=0.091  Score=34.91  Aligned_cols=20  Identities=40%  Similarity=0.547  Sum_probs=16.3

Q ss_pred             CCceEEeecCceeEEEEeee
Q psy3290           1 MPWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~   20 (147)
                      |=..|+|||||-+|.+-+..
T Consensus         1 M~i~~iDiGgT~i~~~l~d~   20 (114)
T d2gupa1           1 MTIATIDIGGTGIKFASLTP   20 (114)
T ss_dssp             CCEEEEEEETTEEEEEEECT
T ss_pred             CeEEEEEeCcccEEEEEEcC
Confidence            45679999999999877754

>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glucokinase
domain: Glucokinase Glk
species: Escherichia coli [TaxId: 562]

Probab=94.38  E-value=0.013  Score=38.64  Aligned_cols=19  Identities=26%  Similarity=0.405  Sum_probs=16.7

Q ss_pred             eEEeecCceeEEEEeeeCC
Q psy3290           4 FGMDIGGTLSKLVYFEPKD   22 (147)
Q Consensus         4 faiDIGGTL~KlVYf~~~~   22 (147)
                      +++|||||-+|+..++..+
T Consensus         5 L~~DIGGTn~r~alv~~~~   23 (110)
T d1q18a1           5 LVGDVGGTNARLALCDIAS   23 (110)
T ss_dssp             EEEEECSSEEEEEEEETTT
T ss_pred             EEEEECchhEEEEEEEcCC
Confidence            6999999999999998654

>d1xc3a1 c.55.1.10 (A:1-118) Putative fructokinase YhdR {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Putative fructokinase YhdR
species: Bacillus subtilis [TaxId: 1423]

Probab=93.82  E-value=0.21  Score=32.90  Aligned_cols=19  Identities=21%  Similarity=0.123  Sum_probs=16.2

Q ss_pred             ceEEeecCceeEEEEeeeC
Q psy3290           3 WFGMDIGGTLSKLVYFEPK   21 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~~   21 (147)
                      ..|||||||-+|++-+...
T Consensus         2 ~~giDiGgT~i~~~l~d~~   20 (118)
T d1xc3a1           2 LGGIEAGGTKFVCAVGRED   20 (118)
T ss_dssp             EEEEEECSSEEEEEEECTT
T ss_pred             EEEEEeccCEEEEEEEcCC
Confidence            3699999999999988753

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]

Probab=91.86  E-value=0.046  Score=39.34  Aligned_cols=20  Identities=30%  Similarity=0.532  Sum_probs=17.2

Q ss_pred             CCceEEeecCceeEEEEeee
Q psy3290           1 MPWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~   20 (147)
                      |=.+|||||||-+|.|....
T Consensus         2 M~~lGIDiGGT~~k~~vvd~   21 (259)
T d1huxa_           2 IYTLGIDVGSTASKCIILKD   21 (259)
T ss_dssp             CEEEEEEECSSEEEEEEEET
T ss_pred             cEEEEEEeCcceEEEEEEcC
Confidence            44689999999999999874

>d2ap1a2 c.55.1.10 (A:1-117) Putative regulator protein YcfX {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Putative regulator protein YcfX
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.95  E-value=0.057  Score=35.45  Aligned_cols=18  Identities=44%  Similarity=0.874  Sum_probs=15.3

Q ss_pred             ceEEeecCceeEEEEeee
Q psy3290           3 WFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~   20 (147)
                      .+|||||||-+|++-+..
T Consensus         2 yiGiDiGgT~i~~~l~d~   19 (117)
T d2ap1a2           2 YYGFDIGGTKIALGVFDS   19 (117)
T ss_dssp             EEEEEECSSEEEEEEEET
T ss_pred             EEEEEECcceEEEEEEeC
Confidence            389999999999888754

>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: N-acetylmannosamine kinase NanK
species: Escherichia coli [TaxId: 562]

Probab=90.52  E-value=0.073  Score=35.22  Aligned_cols=20  Identities=30%  Similarity=0.420  Sum_probs=16.6

Q ss_pred             CCceEEeecCceeEEEEeee
Q psy3290           1 MPWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         1 ~p~faiDIGGTL~KlVYf~~   20 (147)
                      |-.+|||||||-+|++=+..
T Consensus         1 M~~lgiDiGgT~i~~~l~d~   20 (119)
T d2aa4a1           1 MTTLAIDIGGTKLAAALIGA   20 (119)
T ss_dssp             CCEEEEEECSSEEEEEEECT
T ss_pred             CeEEEEEeCcCEEEEEEEcC
Confidence            55789999999999887653

>d1woqa1 c.55.1.10 (A:11-139) Inorganic polyphosphate/ATP-glucomannokinase PPGMK {Arthrobacter sp. KM [TaxId: 184230]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: Inorganic polyphosphate/ATP-glucomannokinase PPGMK
species: Arthrobacter sp. KM [TaxId: 184230]

Probab=90.11  E-value=0.078  Score=35.18  Aligned_cols=19  Identities=42%  Similarity=0.536  Sum_probs=16.2

Q ss_pred             CceEEeecCceeEEEEeee
Q psy3290           2 PWFGMDIGGTLSKLVYFEP   20 (147)
Q Consensus         2 p~faiDIGGTL~KlVYf~~   20 (147)
                      |-+|||||||-+|++-+..
T Consensus         3 ~vlGiDiGgT~i~~~l~d~   21 (129)
T d1woqa1           3 PLIGIDIGGTGIKGGIVDL   21 (129)
T ss_dssp             CEEEEEECSSEEEEEEEET
T ss_pred             CEEEEEECcceEEEEEEEC
Confidence            6789999999999887753

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]

Probab=90.04  E-value=0.098  Score=34.30  Aligned_cols=19  Identities=26%  Similarity=0.454  Sum_probs=16.2

Q ss_pred             ceEEeecCceeEEEEeeeC
Q psy3290           3 WFGMDIGGTLSKLVYFEPK   21 (147)
Q Consensus         3 ~faiDIGGTL~KlVYf~~~   21 (147)
                      .+|||+|||-+|.+=+...
T Consensus         6 ~lGID~GGT~tk~~l~d~~   24 (114)
T d1zc6a1           6 LIGVDGGGTGTRIRLHASD   24 (114)
T ss_dssp             EEEEEECSSCEEEEEEETT
T ss_pred             EEEEEcCcceEEEEEEcCC
Confidence            4799999999999888753

>d1sz2a1 c.55.1.7 (A:3-321) Glucokinase Glk {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glucokinase
domain: Glucokinase Glk
species: Escherichia coli [TaxId: 562]

Probab=86.81  E-value=0.18  Score=37.61  Aligned_cols=18  Identities=28%  Similarity=0.418  Sum_probs=15.7

Q ss_pred             eEEeecCceeEEEEeeeC
Q psy3290           4 FGMDIGGTLSKLVYFEPK   21 (147)
Q Consensus         4 faiDIGGTL~KlVYf~~~   21 (147)
                      +|+|||||-+|..-+.+.
T Consensus         4 L~~DIGGT~ir~glvd~~   21 (319)
T d1sz2a1           4 LVGDVGGTNARLALCDIA   21 (319)
T ss_dssp             EEEEEETTEEEEEEEETT
T ss_pred             EEEEEChhheeeEEEECC
Confidence            799999999999888654