Psyllid ID: psy333

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70
Protein Sequence
MAGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHYTPI
Secondary Structure (PSIPRED)
ccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccc
Coil and Loop (DISEMBL)
magqagysaykyipygpvnevlpylsrratenKGVLEKISKEKKLLRQEILRRIKsgklfytpkghytpi
Flexible Loop (DISEMBL)
magqagysaykyipygpvNEVLPYLSRRAtenkgvlekiskekklLRQEILrriksgklfytpkghytpi
Low Complexity Region (SEG)
MAGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHYTPI
Disordered region (IsUnstruct)
******YSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT********
Disordered Region (DISOPRED)
****AGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHY***
Disordered Region (DISEMBL)
MAGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHYTPI
Disordered Region (DISPRO)
****AGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHY*P*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYTPKGHYTPI
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	70	2.2.26 [Sep-21-2011]
Q04499	681	Proline dehydrogenase 1,	yes	N/A	0.971	0.099	0.779	2e-24
Q9WU79	599	Proline dehydrogenase 1,	yes	N/A	0.871	0.101	0.573	6e-16
Q148G5	593	Proline dehydrogenase 1,	yes	N/A	0.871	0.102	0.590	1e-15
O45228	616	Proline dehydrogenase 1,	yes	N/A	0.814	0.092	0.666	1e-15
Q9UF12	536	Probable proline dehydrog	yes	N/A	0.785	0.102	0.563	1e-11
Q8VCZ9	456	Probable proline dehydrog	no	N/A	0.742	0.114	0.576	5e-11
Q2V057	456	Probable proline dehydrog	no	N/A	0.742	0.114	0.576	7e-11
O43272	600	Proline dehydrogenase 1,	no	N/A	0.871	0.101	0.590	7e-11
A6QQ74	461	Probable proline dehydrog	no	N/A	0.671	0.101	0.595	6e-10
Q6NKX1	476	Proline dehydrogenase 2,	yes	N/A	0.728	0.107	0.450	5e-09

>sp|Q04499|PROD_DROME Proline dehydrogenase 1, mitochondrial OS=Drosophila melanogaster GN=slgA PE=1 SV=2

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 58/68 (85%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPV EVLPYLSRRA ENKGVL+KI KEK+LL  EI RR+  G+LFY 
Sbjct: 614 GQAGYSAYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLMRGQLFYK 673

Query: 63  PKGHYTPI 70
           PKG+Y PI
Sbjct: 674 PKGNYVPI 681

Converts proline to delta-1-pyrroline-5-carboxylate.
Drosophila melanogaster (taxid: 7227)
EC: 1EC: .EC: 5EC: .EC: 9EC: 9EC: .EC: 8

>sp|Q9WU79|PROD_MOUSE Proline dehydrogenase 1, mitochondrial OS=Mus musculus GN=Prodh PE=2 SV=2

 Score = 82.8 bits (203), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 48/61 (78%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAG+  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL QE+ RR+++G LF+ 
Sbjct: 538 GQAGFPVYKYVPYGPVMEVLPYLSRRALENSSIMKGAQRERQLLWQELRRRLRTGSLFHH 597

Query: 63  P 63
           P
Sbjct: 598 P 598

Converts proline to delta-1-pyrroline-5-carboxylate.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|Q148G5|PROD_BOVIN Proline dehydrogenase 1, mitochondrial OS=Bos taurus GN=PRODH PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 47/61 (77%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAG+  YKY+PYGPV EVLPYLSRRA EN GV++   +E++LL QE+ RR+ +  LF+ 
Sbjct: 532 GQAGFPVYKYVPYGPVMEVLPYLSRRALENSGVMKGAQRERQLLWQELKRRLCTRSLFHQ 591

Query: 63  P 63
           P
Sbjct: 592 P 592

Converts proline to delta-1-pyrroline-5-carboxylate.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|O45228|PROD_CAEEL Proline dehydrogenase 1, mitochondrial OS=Caenorhabditis elegans GN=B0513.5 PE=3 SV=2

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/57 (66%), Positives = 46/57 (80%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKL 59
           GQAG+S YKY+PYGPV EVLPYLSRRA EN  VL+K +KE+ LL +E+ RRI SG+ 
Sbjct: 552 GQAGFSVYKYLPYGPVEEVLPYLSRRALENGSVLKKANKERDLLWKELKRRISSGEF 608

Converts proline to delta-1-pyrroline-5-carboxylate.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|Q9UF12|PROD2_HUMAN Probable proline dehydrogenase 2 OS=Homo sapiens GN=PRODH2 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/55 (56%), Positives = 40/55 (72%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSG 57
           GQAGY  YK IPYG + EV+PYL RRA EN+ VL+   +E++LL QE+ RR+  G
Sbjct: 476 GQAGYVVYKSIPYGSLEEVIPYLIRRAQENRSVLQGARREQELLSQELWRRLLPG 530

Converts proline to delta-1-pyrroline-5-carboxylate.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|Q8VCZ9|PROD2_MOUSE Probable proline dehydrogenase 2 OS=Mus musculus GN=Prodh2 PE=2 SV=1

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 38/52 (73%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRI 54
           GQAGY  YK IPYG + EV+PYL RRA EN+ VL+   +E+ LL QE+ RR+
Sbjct: 400 GQAGYMVYKSIPYGCLEEVIPYLIRRAQENRSVLQGARREQALLSQELWRRL 451

Converts proline to delta-1-pyrroline-5-carboxylate.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|Q2V057|PROD2_RAT Probable proline dehydrogenase 2 OS=Rattus norvegicus GN=Prodh2 PE=2 SV=1

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/52 (57%), Positives = 38/52 (73%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRI 54
           GQAGY  YK IPYG + EV+PYL RRA EN+ VL+   +E+ LL QE+ RR+
Sbjct: 400 GQAGYMVYKSIPYGCLEEVIPYLIRRAQENRSVLQGARREQALLSQELWRRL 451

Converts proline to delta-1-pyrroline-5-carboxylate.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|O43272|PROD_HUMAN Proline dehydrogenase 1, mitochondrial OS=Homo sapiens GN=PRODH PE=1 SV=3

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 48/61 (78%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGY  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL  E+LRR+++G LF+ 
Sbjct: 539 GQAGYPVYKYVPYGPVMEVLPYLSRRALENSSLMKGTHRERQLLWLELLRRLRTGNLFHR 598

Query: 63  P 63
           P
Sbjct: 599 P 599

Converts proline to delta-1-pyrroline-5-carboxylate.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|A6QQ74|PROD2_BOVIN Probable proline dehydrogenase 2 OS=Bos taurus GN=PRODH2 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/47 (59%), Positives = 35/47 (74%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQE 49
           GQAGY+ YK IPYG + EV+PYL RRA EN+ VL    +E++LL QE
Sbjct: 400 GQAGYAVYKSIPYGSLEEVIPYLIRRAQENRSVLRGARREQELLSQE 446

Converts proline to delta-1-pyrroline-5-carboxylate.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

>sp|Q6NKX1|PROD2_ARATH Proline dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=POX2 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/51 (45%), Positives = 40/51 (78%)

Query: 4   QAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRI 54
           +AG++  KY+PYGPV+  +PYL RRA EN+G++   + +++L+R+E+ RR+
Sbjct: 423 RAGFNVSKYMPYGPVDTAIPYLIRRAYENRGMMSTGALDRQLMRKELKRRV 473

Converts proline to delta-1-pyrroline-5-carboxylate.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 5

EC: .

EC: 9

EC: 9

EC: .

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
312384227	566	hypothetical protein AND_02390 [Anophele	1.0	0.123	0.785	1e-24
91087919	614	PREDICTED: similar to sluggish A CG1417-	0.971	0.110	0.779	3e-24
288899100	616	proline dehydrogenase isoform 2 [Leptino	0.971	0.110	0.764	1e-23
288899098	616	proline dehydrogenase isoform 1 [Leptino	0.971	0.110	0.764	1e-23
157135919	384	proline oxidase [Aedes aegypti] gi|10887	0.971	0.177	0.779	2e-23
328700405	388	PREDICTED: proline dehydrogenase 1, mito	0.971	0.175	0.75	2e-23
195132615	605	GI21543 [Drosophila mojavensis] gi|19390	0.971	0.112	0.794	2e-23
347970776	710	AGAP003860-PA [Anopheles gambiae str. PE	0.971	0.095	0.779	3e-23
347970778	681	AGAP003860-PB [Anopheles gambiae str. PE	0.971	0.099	0.779	3e-23
328777435	516	PREDICTED: proline dehydrogenase 1, mito	0.971	0.131	0.75	4e-23

>gi|312384227|gb|EFR28998.1| hypothetical protein AND_02390 [Anopheles darlingi]

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 60/70 (85%)

Query: 1   MAGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLF 60
            AGQAGYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK+LL  EI +R+  G+LF
Sbjct: 497 FAGQAGYSAYKYIPYGPVNEVLPYLSRRAQENKGVLQKIKKEKRLLLSEITKRLAKGQLF 556

Query: 61  YTPKGHYTPI 70
           YTPKG Y PI
Sbjct: 557 YTPKGKYVPI 566

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91087919|ref|XP_975998.1| PREDICTED: similar to sluggish A CG1417-PE isoform 2 [Tribolium castaneum] gi|270011933|gb|EFA08381.1| hypothetical protein TcasGA2_TC006024 [Tribolium castaneum]

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 61/68 (89%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQ+GYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK+LL  EILRR+ +G+ +YT
Sbjct: 547 GQSGYSAYKYIPYGPVNEVLPYLSRRAHENKGVLKKIKKEKRLLGSEILRRVATGQWWYT 606

Query: 63  PKGHYTPI 70
           PKG YTP+
Sbjct: 607 PKGDYTPV 614

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|288899100|gb|ADC67082.1| proline dehydrogenase isoform 2 [Leptinotarsa decemlineata]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 61/68 (89%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQ+GYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK LL +EILRR+ +G+++YT
Sbjct: 549 GQSGYSAYKYIPYGPVNEVLPYLSRRAHENKGVLKKIKKEKSLLSKEILRRLVTGQIWYT 608

Query: 63  PKGHYTPI 70
           PKG Y P+
Sbjct: 609 PKGKYVPV 616

Source: Leptinotarsa decemlineata

Species: Leptinotarsa decemlineata

Genus: Leptinotarsa

Family: Chrysomelidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|288899098|gb|ADC67081.1| proline dehydrogenase isoform 1 [Leptinotarsa decemlineata]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 61/68 (89%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQ+GYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK LL +EILRR+ +G+++YT
Sbjct: 549 GQSGYSAYKYIPYGPVNEVLPYLSRRAHENKGVLKKIKKEKSLLSKEILRRLVTGQIWYT 608

Query: 63  PKGHYTPI 70
           PKG Y P+
Sbjct: 609 PKGKYVPV 616

Source: Leptinotarsa decemlineata

Species: Leptinotarsa decemlineata

Genus: Leptinotarsa

Family: Chrysomelidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157135919|ref|XP_001663619.1| proline oxidase [Aedes aegypti] gi|108870085|gb|EAT34310.1| AAEL013431-PA, partial [Aedes aegypti]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 59/68 (86%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK+LL  EI +R+  G+LFY 
Sbjct: 317 GQAGYSAYKYIPYGPVNEVLPYLSRRAQENKGVLQKIKKEKRLLLSEITKRLAKGQLFYK 376

Query: 63  PKGHYTPI 70
           PKG+Y PI
Sbjct: 377 PKGNYVPI 384

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328700405|ref|XP_001950501.2| PREDICTED: proline dehydrogenase 1, mitochondrial-like [Acyrthosiphon pisum]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 59/68 (86%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+K+ KE+ LLR+E+ RRI  G+ FY 
Sbjct: 321 GQAGYSAYKYIPYGPVNEVLPYLSRRAMENKGVLKKLVKERTLLRKELFRRILRGQFFYK 380

Query: 63  PKGHYTPI 70
           P G+YTP+
Sbjct: 381 PNGNYTPV 388

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195132615|ref|XP_002010738.1| GI21543 [Drosophila mojavensis] gi|193907526|gb|EDW06393.1| GI21543 [Drosophila mojavensis]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/68 (79%), Positives = 59/68 (86%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPV EVLPYLSRRA ENKGVL+KI KEK+LL  EI RR+  G+LFYT
Sbjct: 538 GQAGYSAYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLFRGQLFYT 597

Query: 63  PKGHYTPI 70
           PKG+Y PI
Sbjct: 598 PKGNYVPI 605

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970776|ref|XP_310420.5| AGAP003860-PA [Anopheles gambiae str. PEST] gi|333466826|gb|EAA06094.5| AGAP003860-PA [Anopheles gambiae str. PEST]

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 58/68 (85%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK+LL  EI +R+  G+LFY 
Sbjct: 643 GQAGYSAYKYIPYGPVNEVLPYLSRRAQENKGVLQKIKKEKRLLLSEITKRLAKGQLFYK 702

Query: 63  PKGHYTPI 70
           PKG Y PI
Sbjct: 703 PKGKYVPI 710

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347970778|ref|XP_003436637.1| AGAP003860-PB [Anopheles gambiae str. PEST] gi|347970780|ref|XP_003436638.1| AGAP003860-PC [Anopheles gambiae str. PEST] gi|333466827|gb|EGK96391.1| AGAP003860-PB [Anopheles gambiae str. PEST] gi|333466828|gb|EGK96392.1| AGAP003860-PC [Anopheles gambiae str. PEST]

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/68 (77%), Positives = 58/68 (85%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQAGYSAYKYIPYGPVNEVLPYLSRRA ENKGVL+KI KEK+LL  EI +R+  G+LFY 
Sbjct: 614 GQAGYSAYKYIPYGPVNEVLPYLSRRAQENKGVLQKIKKEKRLLLSEITKRLAKGQLFYK 673

Query: 63  PKGHYTPI 70
           PKG Y PI
Sbjct: 674 PKGKYVPI 681

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777435|ref|XP_395275.3| PREDICTED: proline dehydrogenase 1, mitochondrial [Apis mellifera]

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 60/68 (88%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
           GQ+GYSAYKYIPYGPV EVLPYLSRRA EN+G+L+KI KEK+LL  EILRR  SG++FY 
Sbjct: 449 GQSGYSAYKYIPYGPVKEVLPYLSRRAQENRGILKKIKKEKRLLLTEILRRFASGQIFYK 508

Query: 63  PKGHYTPI 70
           PKG+YTP+
Sbjct: 509 PKGNYTPV 516

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	70
FB|FBgn0003423	681	slgA "sluggish A" [Drosophila	0.971	0.099	0.779	2.3e-23
ZFIN|ZDB-GENE-120215-75	233	si:ch73-209e20.3 "si:ch73-209e	0.871	0.261	0.622	4.1e-17
UNIPROTKB|E7EQL6	492	PRODH "Proline dehydrogenase 1	0.871	0.123	0.590	3.1e-15
RGD|1590932	599	Prodh "proline dehydrogenase (	0.871	0.101	0.573	4.6e-15
UNIPROTKB|O43272	600	PRODH "Proline dehydrogenase 1	0.871	0.101	0.590	4.6e-15
MGI|MGI:97770	599	Prodh "proline dehydrogenase"	0.871	0.101	0.573	5.9e-15
WB|WBGene00007197	616	B0513.5 [Caenorhabditis elegan	0.8	0.090	0.678	8e-15
UNIPROTKB|O45228	616	B0513.5 "Proline dehydrogenase	0.8	0.090	0.678	8e-15
UNIPROTKB|Q148G5	593	PRODH "Proline dehydrogenase 1	0.871	0.102	0.590	2e-14
UNIPROTKB|F1MZH9	461	PRODH2 "Probable proline dehyd	0.871	0.132	0.524	3.6e-11

FB|FBgn0003423 slgA "sluggish A" [Drosophila melanogaster (taxid:7227)]

 Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 53/68 (77%), Positives = 58/68 (85%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAGYSAYKYIPYGPV EVLPYLSRRA ENKGVL+KI KEK+LL  EI RR+  G+LFY 
Sbjct:   614 GQAGYSAYKYIPYGPVEEVLPYLSRRAQENKGVLKKIKKEKRLLLSEIRRRLMRGQLFYK 673

Query:    63 PKGHYTPI 70
             PKG+Y PI
Sbjct:   674 PKGNYVPI 681

GO:0007626 "locomotory behavior" evidence=IMP

GO:0042331 "phototaxis" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0006562 "proline catabolic process" evidence=ISS;NAS;IMP

GO:0004657 "proline dehydrogenase activity" evidence=ISS;IMP

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0006537 "glutamate biosynthetic process" evidence=ISS;NAS

GO:0055114 "oxidation-reduction process" evidence=IEA

ZFIN|ZDB-GENE-120215-75 si:ch73-209e20.3 "si:ch73-209e20.3" [Danio rerio (taxid:7955)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAG+  YKY+PYGPVNEV+PYLSRRA EN+G ++   +E+ LL +EI RR+ SG+L YT
Sbjct:   171 GQAGFPVYKYVPYGPVNEVIPYLSRRAQENRGFMKGSQRERSLLWKEIKRRLFSGQLLYT 230

Query:    63 P 63
             P
Sbjct:   231 P 231

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0004657 "proline dehydrogenase activity" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

UNIPROTKB|E7EQL6 PRODH "Proline dehydrogenase 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 36/61 (59%), Positives = 48/61 (78%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAGY  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL  E+LRR+++G LF+ 
Sbjct:   431 GQAGYPVYKYVPYGPVMEVLPYLSRRALENSSLMKGTHRERQLLWLELLRRLRTGNLFHR 490

Query:    63 P 63
             P
Sbjct:   491 P 491

GO:0004657 "proline dehydrogenase activity" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

RGD|1590932 Prodh "proline dehydrogenase (oxidase) 1" [Rattus norvegicus (taxid:10116)]

 Score = 200 (75.5 bits), Expect = 4.6e-15, P = 4.6e-15
 Identities = 35/61 (57%), Positives = 48/61 (78%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAG+  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL QE+ RR+++G LF+ 
Sbjct:   538 GQAGFPVYKYVPYGPVMEVLPYLSRRALENSSIMKGAQRERQLLWQELCRRLRTGSLFHH 597

Query:    63 P 63
             P
Sbjct:   598 P 598

GO:0004657 "proline dehydrogenase activity" evidence=ISO;IMP

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

GO:0016597 "amino acid binding" evidence=IMP

GO:0071949 "FAD binding" evidence=ISO

UNIPROTKB|O43272 PRODH "Proline dehydrogenase 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 200 (75.5 bits), Expect = 4.6e-15, P = 4.6e-15
 Identities = 36/61 (59%), Positives = 48/61 (78%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAGY  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL  E+LRR+++G LF+ 
Sbjct:   539 GQAGYPVYKYVPYGPVMEVLPYLSRRALENSSLMKGTHRERQLLWLELLRRLRTGNLFHR 598

Query:    63 P 63
             P
Sbjct:   599 P 599

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0008631 "intrinsic apoptotic signaling pathway in response to oxidative stress" evidence=NAS

GO:0071949 "FAD binding" evidence=IDA

GO:0004657 "proline dehydrogenase activity" evidence=IDA

GO:0006560 "proline metabolic process" evidence=TAS

GO:0005743 "mitochondrial inner membrane" evidence=TAS

GO:0006562 "proline catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0019470 "4-hydroxyproline catabolic process" evidence=TAS

MGI|MGI:97770 Prodh "proline dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 199 (75.1 bits), Expect = 5.9e-15, P = 5.9e-15
 Identities = 35/61 (57%), Positives = 48/61 (78%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAG+  YKY+PYGPV EVLPYLSRRA EN  +++   +E++LL QE+ RR+++G LF+ 
Sbjct:   538 GQAGFPVYKYVPYGPVMEVLPYLSRRALENSSIMKGAQRERQLLWQELRRRLRTGSLFHH 597

Query:    63 P 63
             P
Sbjct:   598 P 598

GO:0004657 "proline dehydrogenase activity" evidence=ISO;ISS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0006560 "proline metabolic process" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;ISS

GO:0071949 "FAD binding" evidence=ISO

WB|WBGene00007197 B0513.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 198 (74.8 bits), Expect = 8.0e-15, P = 8.0e-15
 Identities = 38/56 (67%), Positives = 46/56 (82%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGK 58
             GQAG+S YKY+PYGPV EVLPYLSRRA EN  VL+K +KE+ LL +E+ RRI SG+
Sbjct:   552 GQAGFSVYKYLPYGPVEEVLPYLSRRALENGSVLKKANKERDLLWKELKRRISSGE 607

GO:0004657 "proline dehydrogenase activity" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0006412 "translation" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

UNIPROTKB|O45228 B0513.5 "Proline dehydrogenase 1, mitochondrial" [Caenorhabditis elegans (taxid:6239)]

 Score = 198 (74.8 bits), Expect = 8.0e-15, P = 8.0e-15
 Identities = 38/56 (67%), Positives = 46/56 (82%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGK 58
             GQAG+S YKY+PYGPV EVLPYLSRRA EN  VL+K +KE+ LL +E+ RRI SG+
Sbjct:   552 GQAGFSVYKYLPYGPVEEVLPYLSRRALENGSVLKKANKERDLLWKELKRRISSGE 607

GO:0071949 "FAD binding" evidence=ISS

GO:0004657 "proline dehydrogenase activity" evidence=ISS

UNIPROTKB|Q148G5 PRODH "Proline dehydrogenase 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 194 (73.4 bits), Expect = 2.0e-14, P = 2.0e-14
 Identities = 36/61 (59%), Positives = 47/61 (77%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAG+  YKY+PYGPV EVLPYLSRRA EN GV++   +E++LL QE+ RR+ +  LF+ 
Sbjct:   532 GQAGFPVYKYVPYGPVMEVLPYLSRRALENSGVMKGAQRERQLLWQELKRRLCTRSLFHQ 591

Query:    63 P 63
             P
Sbjct:   592 P 592

GO:0004657 "proline dehydrogenase activity" evidence=ISS

GO:0071949 "FAD binding" evidence=ISS

GO:0010133 "proline catabolic process to glutamate" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

UNIPROTKB|F1MZH9 PRODH2 "Probable proline dehydrogenase 2" [Bos taurus (taxid:9913)]

 Score = 162 (62.1 bits), Expect = 3.6e-11, P = 3.6e-11
 Identities = 32/61 (52%), Positives = 42/61 (68%)

Query:     3 GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGKLFYT 62
             GQAGY+ YK IPYG + EV+PYL RRA EN+ VL    +E++LL QE+ RR+    L  +
Sbjct:   400 GQAGYAVYKSIPYGSLEEVIPYLIRRAQENRSVLRGARREQELLSQELRRRLLGRSLRVS 459

Query:    63 P 63
             P
Sbjct:   460 P 460

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0006562 "proline catabolic process" evidence=IEA

GO:0006537 "glutamate biosynthetic process" evidence=IEA

GO:0004657 "proline dehydrogenase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O45228	PROD_CAEEL	1, ., 5, ., 9, 9, ., 8	0.6666	0.8142	0.0925	yes	N/A
Q9WU79	PROD_MOUSE	1, ., 5, ., 9, 9, ., 8	0.5737	0.8714	0.1018	yes	N/A
Q04499	PROD_DROME	1, ., 5, ., 9, 9, ., 8	0.7794	0.9714	0.0998	yes	N/A
Q148G5	PROD_BOVIN	1, ., 5, ., 9, 9, ., 8	0.5901	0.8714	0.1028	yes	N/A
Q86H28	PROD_DICDI	1, ., 5, ., 9, 9, ., 8	0.5652	0.6428	0.0786	yes	N/A
Q9UF12	PROD2_HUMAN	1, ., 5, ., 9, 9, ., 8	0.5636	0.7857	0.1026	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	70
PLN02681	455	PLN02681, PLN02681, proline dehydrogenase	3e-18
pfam01619	341	pfam01619, Pro_dh, Proline dehydrogenase	3e-12

>gnl|CDD|215366 PLN02681, PLN02681, proline dehydrogenase

 Score = 76.3 bits (188), Expect = 3e-18
 Identities = 29/53 (54%), Positives = 41/53 (77%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIK 55
           G AG+   KY+PYGPV EV+PYL RRA EN+G+L   + +++LLR+E+ RR+K
Sbjct: 399 GNAGFRVSKYLPYGPVEEVIPYLLRRAEENRGLLSGSAIDRQLLRKELKRRLK 451

Length = 455

>gnl|CDD|216609 pfam01619, Pro_dh, Proline dehydrogenase

 Score = 59.3 bits (144), Expect = 3e-12
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLL 46
           G+AGY+  KY PYGPV E+L YL RR  EN      +++E+ L 
Sbjct: 298 GKAGYNVRKYAPYGPVEELLAYLVRRLLENGANSSFVNRERDLK 341

Length = 341

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	70
KOG0186|consensus	506		99.89
PLN02681	455	proline dehydrogenase	99.86
PF01619	313	Pro_dh: Proline dehydrogenase; InterPro: IPR002872	99.55
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	98.81
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.75
PRK11809	1318	putA trifunctional transcriptional regulator/proli	98.23
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	91.3

>KOG0186|consensus

Probab=99.89  E-value=9e-24  Score=165.87  Aligned_cols=57  Identities=58%  Similarity=1.078  Sum_probs=55.0

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhHHHHHhhHHHHHHHHHHHHHhhcCCC
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSGK   58 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~~l~~~~~e~~~l~~El~RR~~~~~   58 (70)
                      |+++||+|||||||||++|++|||+|||+||.|++.++..|++++++||+||++.+.
T Consensus       449 L~qagf~V~KYvPyGPv~EvlPYL~RRA~EN~~~l~~~~~er~ll~~eL~RRl~~G~  505 (506)
T KOG0186|consen  449 LGQAGFNVYKYVPYGPVEEVLPYLLRRAQENRSALKGANRERQLLRQELKRRLRAGL  505 (506)
T ss_pred             hccCCceeEEeecCCCHHHHHHHHHHHHHhhhhhhhcccccHHHHHHHHHhhhhccc
Confidence            889999999999999999999999999999999999999999999999999998753

>PLN02681 proline dehydrogenase

Probab=99.86  E-value=2.1e-22  Score=155.75  Aligned_cols=56  Identities=52%  Similarity=0.987  Sum_probs=54.0

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhHHHHHhhHHHHHHHHHHHHHhhcCC
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKKLLRQEILRRIKSG   57 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~~l~~~~~e~~~l~~El~RR~~~~   57 (70)
                      |+++||+|+||+||||++||+|||+|||+||.+++++++.|+++|++||+||++.+
T Consensus       398 L~~~G~~V~kYvPyG~~~e~~pYL~RRa~EN~~~~~~~~~er~~l~~El~RR~~~~  453 (455)
T PLN02681        398 LGNAGFRVSKYLPYGPVEEVIPYLLRRAEENRGLLSGSAIDRQLLRKELKRRLKAA  453 (455)
T ss_pred             HHhcCCCEEEEeeccCchhhHHHHHHHHhhhhHhHhccHHHHHHHHHHHHhhhccc
Confidence            78999999999999999999999999999999999999999999999999998664

>PF01619 Pro_dh: Proline dehydrogenase; InterPro: IPR002872 The proline oxidase/dehydrogenase 1

Probab=99.55  E-value=1.3e-15  Score=111.59  Aligned_cols=43  Identities=49%  Similarity=0.841  Sum_probs=39.8

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhHHHHHhhHHHHH
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKISKEKK   44 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~~l~~~~~e~~   44 (70)
                      |+++||+|+||+||||++||+|||+||++||.++++.+.++.+
T Consensus       269 L~~~g~~v~~YvP~G~~~~~~~YL~RRl~EN~~~~~~~~~~~~  311 (313)
T PF01619_consen  269 LAQAGYRVRKYVPYGPVEEWMPYLVRRLAENPANLSFVRREFN  311 (313)
T ss_dssp             HHHHTSEEEEEEEESEGGGHHHHHHHHHHHHHGTTSHHHHHT-
T ss_pred             HHhCCCCEEEEEecCChhHHHHHHHHHHHhchhHHHHHHHHhh
Confidence            6789999999999999999999999999999999999887764

5.99.8 from EC is responsible for the first step in the conversion of proline to glutamate for use as a carbon and nitrogen source. The enzyme requires FAD as a cofactor, and is induced by proline.; GO: 0004657 proline dehydrogenase activity, 0006537 glutamate biosynthetic process, 0006562 proline catabolic process, 0055114 oxidation-reduction process; PDB: 2G37_A 2EKG_B 4F9I_B 3HAZ_A 2FZM_A 3E2Q_A 3E2S_A 2FZN_A 1K87_A 1TJ2_A ....

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.81  E-value=2.3e-09  Score=90.03  Aligned_cols=36  Identities=33%  Similarity=0.665  Sum_probs=31.7

Q ss_pred             ccCCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhh
Q psy333            4 QAGYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKI   39 (70)
Q Consensus         4 ~~G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~   39 (70)
                      +.|++|.+|+|||+++||+|||+||+.||   .+++.+.
T Consensus       444 ~~g~~vrvY~P~G~~~~~l~YLvRRl~EN~an~sfv~~~  482 (1038)
T PRK11904        444 APGIPCRIYAPVGSHKDLLPYLVRRLLENGANSSFVHRL  482 (1038)
T ss_pred             hCCCcEEEEEEeccchhhHHHHHHHHHhcchhHHHHHHh
Confidence            56999999999999999999999999999   5555543

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.75  E-value=6.2e-09  Score=88.59  Aligned_cols=37  Identities=32%  Similarity=0.553  Sum_probs=32.5

Q ss_pred             ccCCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhhH
Q psy333            4 QAGYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKIS   40 (70)
Q Consensus         4 ~~G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~~   40 (70)
                      +.|++|.+|+|||+++||+|||+||+.||   .+++.+..
T Consensus       446 ~~g~~vriY~P~G~~~~~l~YLvRRl~EN~an~sfv~~~~  485 (1208)
T PRK11905        446 KLGRPCRIYAPVGTHETLLAYLVRRLLENGANSSFVNRIV  485 (1208)
T ss_pred             cCCCeeEEEEEecchHHhHHHHHHHHHhccchHHHHHHhh
Confidence            57999999999999999999999999999   56666543

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.23  E-value=7.1e-07  Score=77.02  Aligned_cols=30  Identities=33%  Similarity=0.490  Sum_probs=27.2

Q ss_pred             cCCceeEEeeccChhhhHHHHHHHHHHhHH
Q psy333            5 AGYSAYKYIPYGPVNEVLPYLSRRATENKG   34 (70)
Q Consensus         5 ~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~   34 (70)
                      .|+.|.+|+|||+.++|||||+||+.||..
T Consensus       533 ~~~~~RiYaPvG~~~~~l~YLvRRLlEN~A  562 (1318)
T PRK11809        533 LNRPCRIYAPVGTHETLLAYLVRRLLENGA  562 (1318)
T ss_pred             CCCceEEEEEeechHHhHHHHHHHHhhcch
Confidence            367889999999999999999999999865

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=91.30  E-value=0.2  Score=42.02  Aligned_cols=38  Identities=32%  Similarity=0.525  Sum_probs=30.5

Q ss_pred             cCCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhhHHH
Q psy333            5 AGYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKISKE   42 (70)
Q Consensus         5 ~G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~~~e   42 (70)
                      .|-++--|.|-|+-++-++||+||..||   +|++.+-.+|
T Consensus         6 l~r~cRiYAPVGtHetLLaYLVRRLLENGANsSFVn~i~D~   46 (769)
T COG4230           6 LNRPCRIYAPVGTHETLLAYLVRRLLENGANSSFVNRIADE   46 (769)
T ss_pred             cCCceEEEccCcchHHHHHHHHHHHHhcCCchHHHHhhcCC
Confidence            3556788999999999999999999996   5666664433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	70
2ekg_A	327	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.23
1k87_A	669	PUTA, proline dehydrogenase, proline dehydroge; mu	99.15
3e2q_A	551	Proline oxidase, proline dehydrogenase; proline ut	99.14
4h6q_A	312	Proline dehydrogenase; BETA8-alpha8-barrel, flavoe	99.14
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	99.06
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	99.04

>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*

Probab=99.23  E-value=2.4e-12  Score=95.33  Aligned_cols=36  Identities=36%  Similarity=0.734  Sum_probs=27.9

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhHHHHHhh
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENKGVLEKI   39 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~~l~~~   39 (70)
                      |+++||+|+||+|||+  +|+|||+||+.||.+.++-.
T Consensus       285 L~~~g~~vr~YvP~G~--~~~~YLvRRl~EN~an~~f~  320 (327)
T 2ekg_A          285 LAREGYTVRAYVPYGR--DWYPYLTRRIAERPENLLLV  320 (327)
T ss_dssp             HHHTTCEEEEEEEEET--THHHHHHHHHHHC-------
T ss_pred             HHhCCCCEEEEEEEcc--chHHHHHHHHhHChHHHHHH
Confidence            6788999999999999  99999999999998776643

>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2

Probab=99.15  E-value=1.2e-11  Score=98.81  Aligned_cols=36  Identities=31%  Similarity=0.516  Sum_probs=32.5

Q ss_pred             cCCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhhH
Q psy333            5 AGYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKIS   40 (70)
Q Consensus         5 ~G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~~   40 (70)
                      +||+|+||+|||+++||+|||+||+.||   .+++.+..
T Consensus       533 ~G~~vr~YvP~G~~~d~l~YLvRRl~EN~an~sFv~~~~  571 (669)
T 1k87_A          533 LNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIA  571 (669)
T ss_dssp             CCCCEEEEEEECCGGGTHHHHHHHHHHHHCTTSHHHHTT
T ss_pred             CCCCeEEEeeCCchHHHHHHHHHHHHhccchhHHHHHhh
Confidence            7999999999999999999999999999   57776653

>3e2q_A Proline oxidase, proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, DNA-binding, FAD, flavoprotein, multifunctional enzyme, NAD; HET: FAD 1PE; 1.75A {Escherichia coli} PDB: 3e2r_A* 3e2s_A* 1tj2_A* 1tiw_A* 1tj0_A* 1tj1_A* 2fzm_A* 2fzn_A* 3itg_A*

Probab=99.14  E-value=2e-11  Score=96.13  Aligned_cols=35  Identities=29%  Similarity=0.429  Sum_probs=31.3

Q ss_pred             cCCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhh
Q psy333            5 AGYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKI   39 (70)
Q Consensus         5 ~G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~   39 (70)
                      .||+|+||+|||+++||+|||+||+.||   .+++.+.
T Consensus       448 ~G~~vr~YvPyG~~~e~lpYLvRRl~EN~aN~sFv~~~  485 (551)
T 3e2q_A          448 LNRPCRISAPVGTHETLLAYLVRRLLENGANTSFVNRI  485 (551)
T ss_dssp             CCCCEEEEEEECCGGGCHHHHHHHHHHHHCTTSHHHHT
T ss_pred             CCCCeEEEeecCchHHHHHHHHHHHHhcchhHHHHHHh
Confidence            6999999999999999999999999999   5556554

>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*

Probab=99.14  E-value=1.2e-11  Score=91.07  Aligned_cols=31  Identities=35%  Similarity=0.707  Sum_probs=28.4

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhHH
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENKG   34 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~~   34 (70)
                      |+++||+|+||+|||+  ||+|||+||+.||..
T Consensus       270 L~~~g~~vr~YvP~G~--~~~~YL~RRl~EN~a  300 (312)
T 4h6q_A          270 LAAEGYRVRVYLPYGR--DWYAYFSRRIAETPR  300 (312)
T ss_dssp             HHHTTCCEEEEEEESS--CCHHHHHHHHHTCC-
T ss_pred             HHhcCCCEEEEeEEcc--chHHHHHHHHHhchH
Confidence            6788999999999999  999999999999964

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=99.06  E-value=4.1e-11  Score=98.64  Aligned_cols=38  Identities=26%  Similarity=0.465  Sum_probs=32.8

Q ss_pred             cccc--CCceeEEeeccChhhhHHHHHHHHHHh---HHHHHhh
Q psy333            2 AGQA--GYSAYKYIPYGPVNEVLPYLSRRATEN---KGVLEKI   39 (70)
Q Consensus         2 L~~~--G~~V~KYvPyG~v~e~lpYL~RRA~EN---~~~l~~~   39 (70)
                      |+++  ||+|+||+|||+++||+|||+||++||   .+++.+.
T Consensus       431 L~~~~~g~~vr~YvP~G~~~e~l~YLvRRl~EN~an~sf~~~~  473 (1001)
T 3haz_A          431 LAKDHADIAYRTYAPVGSHRDLLAYLVRRLLENGANSSFVAQA  473 (1001)
T ss_dssp             HHHHCTTCCEEEEEEEEEGGGHHHHHHHHHHHHTCTTCHHHHH
T ss_pred             HHhhcCCCCEEEEeeCCcHHHhHHHHHHHHHhccchHHHHHHh
Confidence            4455  999999999999999999999999999   5566654

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=99.04  E-value=5.3e-11  Score=98.16  Aligned_cols=32  Identities=31%  Similarity=0.398  Sum_probs=30.2

Q ss_pred             ccccCCceeEEeeccChhhhHHHHHHHHHHhH
Q psy333            2 AGQAGYSAYKYIPYGPVNEVLPYLSRRATENK   33 (70)
Q Consensus         2 L~~~G~~V~KYvPyG~v~e~lpYL~RRA~EN~   33 (70)
                      |+++||+|+||+|||++.+|||||+||++||.
T Consensus       418 L~~~g~~vr~YvP~G~~~~~l~YLvRRl~EN~  449 (1026)
T 4f9i_A          418 ILKVAGRIRLYAPYGNMVPGMGYLVRRLLENT  449 (1026)
T ss_dssp             HHHHTCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCEEEEEEeccccccHHHHHHHHhhcc
Confidence            67789999999999999999999999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	70
d1tj1a2	349	c.1.23.2 (A:262-610) Proline dehydrohenase domain	4e-08

>d1tj1a2 c.1.23.2 (A:262-610) Proline dehydrohenase domain of bifunctional PutA protein {Escherichia coli [TaxId: 562]} Length = 349

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FAD-linked oxidoreductase
family: Proline dehydrohenase domain of bifunctional PutA protein
domain: Proline dehydrohenase domain of bifunctional PutA protein
species: Escherichia coli [TaxId: 562]

 Score = 45.6 bits (107), Expect = 4e-08
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 3   GQAGYSAYKYIPYGPVNEVLPYLSRRATEN 32
           G+       Y P G    +L YL RR  EN
Sbjct: 270 GKLNRPCRIYAPVGTHETLLAYLVRRLLEN 299

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	70
d1tj1a2	349	Proline dehydrohenase domain of bifunctional PutA	99.37

>d1tj1a2 c.1.23.2 (A:262-610) Proline dehydrohenase domain of bifunctional PutA protein {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FAD-linked oxidoreductase
family: Proline dehydrohenase domain of bifunctional PutA protein
domain: Proline dehydrohenase domain of bifunctional PutA protein
species: Escherichia coli [TaxId: 562]

Probab=99.37  E-value=1.1e-13  Score=100.15  Aligned_cols=29  Identities=34%  Similarity=0.520  Sum_probs=28.0

Q ss_pred             CCceeEEeeccChhhhHHHHHHHHHHhHH
Q psy333            6 GYSAYKYIPYGPVNEVLPYLSRRATENKG   34 (70)
Q Consensus         6 G~~V~KYvPyG~v~e~lpYL~RRA~EN~~   34 (70)
                      ||+|+||+||||++||+|||+||++||.+
T Consensus       273 g~~v~~YvP~G~~~e~~pYL~RRl~EN~a  301 (349)
T d1tj1a2         273 NRPCRIYAPVGTHETLLAYLVRRLLENGA  301 (349)
T ss_dssp             CCCEEEEEEECCGGGCHHHHHHHHHHHHC
T ss_pred             CcceEEEEeecchHHhHHHHHHHHhhccc
Confidence            99999999999999999999999999974