Psyllid ID: psy378


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MNVLLHSDNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQLLNYTDK
ccEEcccccccEEEEEEcccccccccEEEcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHcEEEEEEEEEccccccccccccc
ccEEEEcccccEEEEEEccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccHccccccc
mnvllhsdnepyrfrikfppdgnrinyvnydkidpfadelpKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMsgmapnqllnytdk
mnvllhsdnepyrfrikfppdgnriNYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSgmapnqllnytdk
MNVLLHSDNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQLLNYTDK
***********YRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQL******
*******DNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQL******
MNVLLHSDNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQLLNYTDK
*NVLLHSDNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQLLNYT**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooo
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MNVLLHSDNEPYRFRIKFPPDGNRINYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSGMAPNQLLNYTDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query107 2.2.26 [Sep-21-2011]
Q9VT28 3479 Protein furry OS=Drosophi yes N/A 0.588 0.018 0.514 8e-14
O94915 3013 Protein furry homolog-lik yes N/A 0.495 0.017 0.421 0.0004
>sp|Q9VT28|FRY_DROME Protein furry OS=Drosophila melanogaster GN=fry PE=1 SV=2 Back     alignment and function desciption
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 5/68 (7%)

Query: 36   FADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSG 95
            F+D  P++IE++W TLC  WPNN+KVI+RYL+IMSGMAP +LL Y   K +  YL+    
Sbjct: 1742 FSDAHPRDIEELWGTLCQFWPNNLKVILRYLVIMSGMAPTELLPY--AKRVALYLV---R 1796

Query: 96   MAPNQLLN 103
              P++LL+
Sbjct: 1797 SCPDRLLD 1804




Trc/fry signaling pathway plays a key role in maintaining the integrity of polarized cell extensions (arista) during morphogenesis, regulates the actin cytoskeleton and plays a key role in patterning sensory neuron dendritic fields by promoting avoidance between homologous dendrites as well as by limiting dendritic branching. Fry positively regulates trc kinase activity.
Drosophila melanogaster (taxid: 7227)
>sp|O94915|FRYL_HUMAN Protein furry homolog-like OS=Homo sapiens GN=FRYL PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
242022424 1665 heat containing protein, putative [Pedic 0.588 0.037 0.558 5e-16
332021994 3196 Protein furry-like protein-like protein 0.588 0.019 0.558 1e-15
328712989 1761 PREDICTED: protein furry-like isoform 2 0.588 0.035 0.558 3e-15
328712987 1762 PREDICTED: protein furry-like isoform 1 0.588 0.035 0.558 3e-15
328785827 3137 PREDICTED: protein furry-like [Apis mell 0.588 0.020 0.544 3e-15
380018403 3222 PREDICTED: LOW QUALITY PROTEIN: protein 0.588 0.019 0.544 3e-15
307188548 1878 Protein furry [Camponotus floridanus] 0.588 0.033 0.544 4e-15
383853798 3127 PREDICTED: protein furry-like [Megachile 0.588 0.020 0.544 4e-15
307202404 1779 Protein furry [Harpegnathos saltator] 0.588 0.035 0.544 4e-15
345484644 3254 PREDICTED: protein furry-like [Nasonia v 0.588 0.019 0.544 5e-15
>gi|242022424|ref|XP_002431640.1| heat containing protein, putative [Pediculus humanus corporis] gi|212516948|gb|EEB18902.1| heat containing protein, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/68 (55%), Positives = 53/68 (77%), Gaps = 5/68 (7%)

Query: 36  FADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSG 95
           F+DE PKEIE++W TLCSCWPNN+KVIIRYL+I+SGMAP +LL+Y       R ++ ++ 
Sbjct: 101 FSDEHPKEIEELWTTLCSCWPNNLKVIIRYLLIISGMAPQELLSYTK-----RVVLYLAR 155

Query: 96  MAPNQLLN 103
             P++LL+
Sbjct: 156 SRPDRLLD 163




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021994|gb|EGI62320.1| Protein furry-like protein-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328712989|ref|XP_003244964.1| PREDICTED: protein furry-like isoform 2 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328712987|ref|XP_001946152.2| PREDICTED: protein furry-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|328785827|ref|XP_003250661.1| PREDICTED: protein furry-like [Apis mellifera] Back     alignment and taxonomy information
>gi|380018403|ref|XP_003693118.1| PREDICTED: LOW QUALITY PROTEIN: protein furry-like [Apis florea] Back     alignment and taxonomy information
>gi|307188548|gb|EFN73284.1| Protein furry [Camponotus floridanus] Back     alignment and taxonomy information
>gi|383853798|ref|XP_003702409.1| PREDICTED: protein furry-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|307202404|gb|EFN81824.1| Protein furry [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|345484644|ref|XP_003425091.1| PREDICTED: protein furry-like [Nasonia vitripennis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query107
FB|FBgn0016081 3479 fry "furry" [Drosophila melano 0.588 0.018 0.514 4.7e-12
UNIPROTKB|O94915 3013 FRYL "Protein furry homolog-li 0.495 0.017 0.438 0.00011
FB|FBgn0016081 fry "furry" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 181 (68.8 bits), Expect = 4.7e-12, P = 4.7e-12
 Identities = 35/68 (51%), Positives = 49/68 (72%)

Query:    36 FADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSGMAPNQLLNYLSMKVIIRYLIIMSG 95
             F+D  P++IE++W TLC  WPNN+KVI+RYL+IMSGMAP +LL Y   K +  YL+    
Sbjct:  1742 FSDAHPRDIEELWGTLCQFWPNNLKVILRYLVIMSGMAPTELLPYA--KRVALYLV---R 1796

Query:    96 MAPNQLLN 103
               P++LL+
Sbjct:  1797 SCPDRLLD 1804




GO:0042052 "rhabdomere development" evidence=IMP
GO:0035316 "non-sensory hair organization" evidence=IMP
GO:0008407 "chaeta morphogenesis" evidence=IMP
GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP
GO:0016055 "Wnt receptor signaling pathway" evidence=IGI
GO:0048800 "antennal morphogenesis" evidence=IMP
GO:0045860 "positive regulation of protein kinase activity" evidence=IMP
GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP
GO:0050773 "regulation of dendrite development" evidence=IMP
GO:0005938 "cell cortex" evidence=IDA
GO:0035317 "imaginal disc-derived wing hair organization" evidence=IGI
GO:0005515 "protein binding" evidence=IPI
GO:0005737 "cytoplasm" evidence=IDA
GO:0048601 "oocyte morphogenesis" evidence=IDA
GO:0070593 "dendrite self-avoidance" evidence=IGI
GO:0045177 "apical part of cell" evidence=IDA
UNIPROTKB|O94915 FRYL "Protein furry homolog-like" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VT28FRY_DROMENo assigned EC number0.51470.58870.0181yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 107
PF14228 1120 MOR2-PAG1_mid: Cell morphogenesis central region 99.27
KOG1825|consensus 2206 96.27
>PF14228 MOR2-PAG1_mid: Cell morphogenesis central region Back     alignment and domain information
Probab=99.27  E-value=5.2e-13  Score=122.77  Aligned_cols=59  Identities=32%  Similarity=0.560  Sum_probs=51.1

Q ss_pred             cceeEEEeecCCCcChHHHHHHHHHHHhcCCCchHHHHHHHHHHhC----CC--------cchhhhhhhHHHH
Q psy378           26 NYVNYDKIDPFADELPKEIEDVWATLCSCWPNNMKVIIRYLIIMSG----MA--------PNQLLNYLSMKVI   86 (107)
Q Consensus        26 NNL~~yiTak~~De~p~Eie~lW~TL~~~WPnNLrvILryLiimsg----~s--------p~~LLpy~KrvVI   86 (107)
                      ||| ||||+||||++|.|||++|.+|+.+ |.|+++||+|||..+-    -.        +.+++|++||+|+
T Consensus       667 ~nL-~~iT~k~~d~~~~Eve~lW~~L~~~-~~N~~~il~FLi~~~le~~~~~~~~~~~~~~~~~~~~~K~v~~  737 (1120)
T PF14228_consen  667 NNL-FYITIKFGDDHPNEVEALWIALASN-PQNIRVILDFLIELGLERCDQNASKEISVAFATLLPYAKRVVL  737 (1120)
T ss_pred             HHH-HHHHHHhccccHHHHHHHHHHHhcC-cccHHHHHHHHHHHhhhhccccchhhhhhhhhhhccccceeeE
Confidence            999 9999999999999999999999986 5899999999997632    21        2379999999875



>KOG1825|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00