Psyllid ID: psy4049

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------53
RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLINC
cccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccEEEccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccccccccccccEEEEHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccEEEEccEEEcccccccccccccccHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccccccc
ccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccHHHHHHHHHccccHHHHHHHHcHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccEEEcccccHcccccccccEEccEEEcccccccccccccccccEcEEEEEEEEEEccHHHHHHHHHHHHHccccEccHHHHHHHHHHcccccccEEcEEEccccccccEEccEEEEEEccHHHHccHHHHcccccccccccccEEEEEHHHHHHHHcHHHHHHHHccEccccEEEEEccEEEccccccccccccccHHHHHHHHcHHHHHHHHHHHccccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccHHHccccccccccEEEcc
rfkstcfittpifyvnasphiGHLYTALLADATHRFVKLVnprissilttgtdehgLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRttsehhfrTVNTVWTKLkqrdsiypnkykgwycvsEESFLlehqirpdekneEESFLLEhqirpdeknegqyvsiesnqpvewvEEQNYMFKLSNYINDVAhwldknedvvkpKKFYNQLRNMCSEIendisvsrpkarvhwgipvpdddtQTIYVWLDALMNYLtvsgypdfhtwpphiqILGKDILKFHGIYWPAFLiaagleppksflvhshwtvdgvkmsksvgnvvdpmsklsdftscgLRYFLLRegtnhsdsnysetKAKNILNAELANTLGNLLNRclsksinpdnvnplvnrecyevmftkEPVLTELIENCQTLHEDVKLhysefnfykgvDSIILVLHLANKfidttkpwtlrkenkIEELNLVLGVTFEVLRICgiglqpivPKLADKLLTrlgiptnerlwdnmrfsdndmfndlinc
RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSIlttgtdehgLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVrttsehhfrtvntvwtklkqrdsiypNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQirpdeknegQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREgtnhsdsnysETKAKNILNAELANTLGNLLNRCLSksinpdnvnplVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIdttkpwtlrkenKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGiptnerlwdnmrfsdndMFNDLINC
RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLINC
****TCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEH***********************************QPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREG************AKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMF******
**KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLI**
RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLINC
**KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLINC
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RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDDDTQTIYVWLDALMNYLTVSGYPDFHTWPPHIQILGKDILKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDNMRFSDNDMFNDLINC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query528 2.2.26 [Sep-21-2011]
Q9VFL5582 Methionine--tRNA ligase, yes N/A 0.933 0.847 0.490 1e-144
Q96GW9593 Methionine--tRNA ligase, yes N/A 0.929 0.827 0.444 1e-126
Q499X9586 Methionine--tRNA ligase, yes N/A 0.937 0.844 0.446 1e-124
Q90YI3590 Methionine--tRNA ligase, N/A N/A 0.933 0.835 0.430 1e-122
A6H7E1593 Methionine--tRNA ligase, yes N/A 0.935 0.833 0.435 1e-121
Q7T0Z0562 Methionine--tRNA ligase, N/A N/A 0.909 0.854 0.431 1e-115
Q54MZ8575 Probable methionine--tRNA yes N/A 0.928 0.852 0.406 1e-107
O14000539 Probable methionine--tRNA yes N/A 0.918 0.899 0.386 8e-95
Q68W54507 Methionine--tRNA ligase O yes N/A 0.907 0.944 0.356 1e-89
Q1RJZ5509 Methionine--tRNA ligase O yes N/A 0.903 0.937 0.355 2e-89
>sp|Q9VFL5|SYMM_DROME Methionine--tRNA ligase, mitochondrial OS=Drosophila melanogaster GN=Aats-met PE=1 SV=2 Back     alignment and function desciption
 Score =  511 bits (1316), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/518 (49%), Positives = 331/518 (63%), Gaps = 25/518 (4%)

Query: 1   RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
           R+ S+ ++TTPIFYVNA+PHIGHLY+A++ADA  R+ +L  P     L TGTDEHG KIQ
Sbjct: 15  RYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQ 74

Query: 61  NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
            AA  H +    +C+ IS +Y+ +F++  I+   ++RTT + H R V   W  L  R  I
Sbjct: 75  QAASLHGVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHI 134

Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
           Y   Y GWYCVS+E+FL + Q+R DE                    G   S+ES  PVEW
Sbjct: 135 YSAAYSGWYCVSDETFLTDSQLRLDEAT------------------GTRYSLESGHPVEW 176

Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWG 240
            EE NYMF+LS + +DV HW+ K E  V+P KF   L +  SE   D+SVSRP  RVHW 
Sbjct: 177 TEETNYMFRLSQFQDDVRHWV-KTEARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWA 235

Query: 241 IPVPDDDTQTIYVWLDALMNYLTVSGYPD--FHT-WPPHIQILGKDILKFHGIYWPAFLI 297
           IPVPDDD+QT+YVWLDAL+NYL+  GYPD  F   WPP  Q++GKDILKFHGIYW AFL+
Sbjct: 236 IPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLL 295

Query: 298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
           AAGLEPP    VHSHWTVDG KMSKS  NVVDP+     +T  GLRYFLLREG  HSD N
Sbjct: 296 AAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGN 355

Query: 358 YSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
           YS  KA+ ILN+ELA+TLGNLL+R  +KS+NP  + P  + E    +     V   L ++
Sbjct: 356 YSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLADLLRSLDVAKRLQDS 415

Query: 418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLG 474
              L E  + HY   +F+   D+ +  LH AN F +++KPWTL+    +     L  ++ 
Sbjct: 416 LLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIA 475

Query: 475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWD 512
           +T + LR+ GI LQPI+P+LA++LL +L +PT +R W+
Sbjct: 476 MTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWN 513

Drosophila melanogaster (taxid: 7227)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0
>sp|Q96GW9|SYMM_HUMAN Methionine--tRNA ligase, mitochondrial OS=Homo sapiens GN=MARS2 PE=1 SV=2 Back     alignment and function description
>sp|Q499X9|SYMM_MOUSE Methionine--tRNA ligase, mitochondrial OS=Mus musculus GN=Mars2 PE=2 SV=2 Back     alignment and function description
>sp|Q90YI3|SYMM_TAKRU Methionine--tRNA ligase, mitochondrial OS=Takifugu rubripes GN=mars2 PE=3 SV=1 Back     alignment and function description
>sp|A6H7E1|SYMM_BOVIN Methionine--tRNA ligase, mitochondrial OS=Bos taurus GN=MARS2 PE=2 SV=1 Back     alignment and function description
>sp|Q7T0Z0|SYMM_XENLA Methionine--tRNA ligase, mitochondrial OS=Xenopus laevis GN=mars2 PE=2 SV=1 Back     alignment and function description
>sp|Q54MZ8|SYMM_DICDI Probable methionine--tRNA ligase, mitochondrial OS=Dictyostelium discoideum GN=mmetS PE=3 SV=1 Back     alignment and function description
>sp|O14000|SYMM_SCHPO Probable methionine--tRNA ligase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC27E2.06c PE=3 SV=1 Back     alignment and function description
>sp|Q68W54|SYM_RICTY Methionine--tRNA ligase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN=metG PE=3 SV=1 Back     alignment and function description
>sp|Q1RJZ5|SYM_RICBR Methionine--tRNA ligase OS=Rickettsia bellii (strain RML369-C) GN=metG PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
157103464553 methionine-tRNA synthetase [Aedes aegypt 0.922 0.880 0.525 1e-153
170029048553 methionine-tRNA synthetase [Culex quinqu 0.935 0.893 0.511 1e-152
158291055563 AGAP002383-PA [Anopheles gambiae str. PE 0.939 0.880 0.501 1e-147
195446223581 GK10894 [Drosophila willistoni] gi|19416 0.937 0.851 0.491 1e-145
328718436527 PREDICTED: methionyl-tRNA synthetase, mi 0.916 0.918 0.525 1e-144
189240952552 PREDICTED: similar to methionine-tRNA sy 0.952 0.911 0.492 1e-144
195570957582 GD20436 [Drosophila simulans] gi|1941993 0.937 0.850 0.486 1e-143
195501663579 GE10041 [Drosophila yakuba] gi|194183990 0.931 0.849 0.489 1e-143
427794917530 Putative methionyl-trna synthetase trans 0.933 0.930 0.498 1e-142
195329048582 GM25865 [Drosophila sechellia] gi|194120 0.933 0.847 0.488 1e-142
>gi|157103464|ref|XP_001647993.1| methionine-tRNA synthetase [Aedes aegypti] gi|108880524|gb|EAT44749.1| AAEL003913-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/512 (52%), Positives = 346/512 (67%), Gaps = 25/512 (4%)

Query: 8   ITTPIFYVNASPHIGHLYTALLADATHRFVKLVNP--RISSILTTGTDEHGLKIQNAAIK 65
           +TTPIFYVNA+PHIGHLY+A++ DA HRF  LV+P  + SSI +TGTDEHG KIQ AA  
Sbjct: 20  VTTPIFYVNAAPHIGHLYSAVITDAIHRFNNLVHPTAQASSIFSTGTDEHGTKIQQAAAS 79

Query: 66  HKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKY 125
           H +    +C +ISD+Y+ +F+ ++I +T Y+RTT   H   V   W  L+   SIY  +Y
Sbjct: 80  HSVPVDTYCQQISDRYRSLFRNFNISHTRYIRTTDPDHTEAVQCFWNALECSGSIYSAQY 139

Query: 126 KGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQN 185
            GWYC+ +E+FL E+Q++                   E N G  VS ES  PVEW EE+N
Sbjct: 140 SGWYCIPDETFLTENQLK-------------------ENNLGVKVSAESGHPVEWTEEKN 180

Query: 186 YMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPD 245
           +MF+L  Y +DV +W+   ED + P KF   L +   E   DIS+SRPK+RV WGI VP 
Sbjct: 181 FMFRLEKYQDDVLYWIKGCEDRIVPIKFRKILLDFLQEKLPDISISRPKSRVSWGIDVPS 240

Query: 246 DDTQTIYVWLDALMNYLTVSGYPD---FHTWPPHIQILGKDILKFHGIYWPAFLIAAGLE 302
           D TQT+YVWLDAL+NYLTVSGYP     H WPP +Q+LGKDILKFHGIYWPAFLIAAGLE
Sbjct: 241 DPTQTVYVWLDALVNYLTVSGYPQEGFVHRWPPTVQVLGKDILKFHGIYWPAFLIAAGLE 300

Query: 303 PPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETK 362
           PP+  LVHSHWTVDG KMSKS GNVVDP  + S +T  G+RYFLLREG  HSD NYS+TK
Sbjct: 301 PPRKLLVHSHWTVDGEKMSKSKGNVVDPNERASLYTHEGIRYFLLREGVAHSDGNYSDTK 360

Query: 363 AKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLH 422
              ILNAELA+T GNLL+RC  K +NP+ V P+V ++ +  + ++  V  +++E    L 
Sbjct: 361 IMRILNAELADTFGNLLSRCCGKVLNPEAVVPVVQQDEFNTL-SQMDVTKKMLELLNELP 419

Query: 423 EDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIEELNLVLGVTFEVLRI 482
           +    HY ++NFY  VDS+I VLH  N F ++T PW L+K  + ++L  +LGVT EVLR 
Sbjct: 420 DKCMTHYRQYNFYLVVDSVIQVLHATNNFFESTAPWKLKKPEEKQQLQAILGVTMEVLRQ 479

Query: 483 CGIGLQPIVPKLADKLLTRLGIPTNERLWDNM 514
            GI LQPIVP ++ KLL +L +  N RLW ++
Sbjct: 480 AGIILQPIVPIMSGKLLDKLSVERNRRLWTDL 511

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|170029048|ref|XP_001842406.1| methionine-tRNA synthetase [Culex quinquefasciatus] gi|167879456|gb|EDS42839.1| methionine-tRNA synthetase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|158291055|ref|XP_312573.4| AGAP002383-PA [Anopheles gambiae str. PEST] gi|157018191|gb|EAA07531.4| AGAP002383-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni] gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni] Back     alignment and taxonomy information
>gi|328718436|ref|XP_001949836.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|189240952|ref|XP_971597.2| PREDICTED: similar to methionine-tRNA synthetase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans] gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans] Back     alignment and taxonomy information
>gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba] gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|427794917|gb|JAA62910.1| Putative methionyl-trna synthetase translation, partial [Rhipicephalus pulchellus] Back     alignment and taxonomy information
>gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia] gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query528
FB|FBgn0027083582 Aats-met "Methionyl-tRNA synth 0.933 0.847 0.490 5.2e-129
UNIPROTKB|Q96GW9593 MARS2 "Methionine--tRNA ligase 0.937 0.834 0.445 1.9e-113
MGI|MGI:2444136586 Mars2 "methionine-tRNA synthet 0.931 0.839 0.451 7.6e-112
UNIPROTKB|A6H7E1593 MARS2 "Methionine--tRNA ligase 0.935 0.833 0.437 5.3e-111
RGD|1311527586 Mars2 "methionyl-tRNA syntheta 0.945 0.851 0.445 5.3e-111
UNIPROTKB|E2RA59593 MARS2 "Uncharacterized protein 0.924 0.822 0.443 2.1e-109
WB|WBGene00013678524 Y105E8A.20 [Caenorhabditis ele 0.929 0.937 0.404 2.4e-108
UNIPROTKB|F1P137549 MARS2 "Uncharacterized protein 0.933 0.897 0.425 2.1e-107
DICTYBASE|DDB_G0285759575 mmetS "methionyl-tRNA syntheta 0.948 0.871 0.410 4.7e-103
POMBASE|SPAC27E2.06c539 SPAC27E2.06c "mitochondrial me 0.922 0.903 0.382 2.8e-89
FB|FBgn0027083 Aats-met "Methionyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1266 (450.7 bits), Expect = 5.2e-129, P = 5.2e-129
 Identities = 254/518 (49%), Positives = 331/518 (63%)

Query:     1 RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
             R+ S+ ++TTPIFYVNA+PHIGHLY+A++ADA  R+ +L  P     L TGTDEHG KIQ
Sbjct:    15 RYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQ 74

Query:    61 NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
              AA  H +    +C+ IS +Y+ +F++  I+   ++RTT + H R V   W  L  R  I
Sbjct:    75 QAASLHGVPVAKYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHI 134

Query:   121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
             Y   Y GWYCVS+E+FL + Q+R DE                    G   S+ES  PVEW
Sbjct:   135 YSAAYSGWYCVSDETFLTDSQLRLDEAT------------------GTRYSLESGHPVEW 176

Query:   181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWG 240
              EE NYMF+LS + +DV HW+ K E  V+P KF   L +  SE   D+SVSRP  RVHW 
Sbjct:   177 TEETNYMFRLSQFQDDVRHWV-KTEARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWA 235

Query:   241 IPVPDDDTQTIYVWLDALMNYLTVSGYPD--FHT-WPPHIQILGKDILKFHGIYWPAFLI 297
             IPVPDDD+QT+YVWLDAL+NYL+  GYPD  F   WPP  Q++GKDILKFHGIYW AFL+
Sbjct:   236 IPVPDDDSQTVYVWLDALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLL 295

Query:   298 AAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSN 357
             AAGLEPP    VHSHWTVDG KMSKS  NVVDP+     +T  GLRYFLLREG  HSD N
Sbjct:   296 AAGLEPPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVAHSDGN 355

Query:   358 YSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTKEPVLTELIEN 417
             YS  KA+ ILN+ELA+TLGNLL+R  +KS+NP  + P  + E    +     V   L ++
Sbjct:   356 YSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLADLLRSLDVAKRLQDS 415

Query:   418 CQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRK---ENKIEELNLVLG 474
                L E  + HY   +F+   D+ +  LH AN F +++KPWTL+    +     L  ++ 
Sbjct:   416 LLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIA 475

Query:   475 VTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWD 512
             +T + LR+ GI LQPI+P+LA++LL +L +PT +R W+
Sbjct:   476 MTMDALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWN 513
GO:0004825 "methionine-tRNA ligase activity" evidence=ISS;NAS
GO:0005739 "mitochondrion" evidence=ISS
GO:0006431 "methionyl-tRNA aminoacylation" evidence=IEA;NAS
GO:0005524 "ATP binding" evidence=IEA
UNIPROTKB|Q96GW9 MARS2 "Methionine--tRNA ligase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2444136 Mars2 "methionine-tRNA synthetase 2 (mitochondrial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|A6H7E1 MARS2 "Methionine--tRNA ligase, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1311527 Mars2 "methionyl-tRNA synthetase 2, mitochondrial" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E2RA59 MARS2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00013678 Y105E8A.20 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1P137 MARS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0285759 mmetS "methionyl-tRNA synthetase, mitochondrial" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC27E2.06c SPAC27E2.06c "mitochondrial methionine-tRNA ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P0DG49SYM_STRPQ6, ., 1, ., 1, ., 1, 00.30460.90710.7203yesN/A
Q9ZCP0SYM_RICPR6, ., 1, ., 1, ., 1, 00.36220.90340.9389yesN/A
Q4UMX2SYM_RICFE6, ., 1, ., 1, ., 1, 00.35120.89960.9277yesN/A
Q54MZ8SYMM_DICDI6, ., 1, ., 1, ., 1, 00.40650.92800.8521yesN/A
A6H7E1SYMM_BOVIN6, ., 1, ., 1, ., 1, 00.43580.93560.8330yesN/A
Q8YAF2SYM_LISMO6, ., 1, ., 1, ., 1, 00.32630.91850.7304yesN/A
Q92F90SYM_LISIN6, ., 1, ., 1, ., 1, 00.32630.91850.7304yesN/A
O67298SYM_AQUAE6, ., 1, ., 1, ., 1, 00.35470.86740.9215yesN/A
Q9KGK8SYM_BACHD6, ., 1, ., 1, ., 1, 00.32110.92610.7409yesN/A
Q8UFA2SYM_AGRT56, ., 1, ., 1, ., 1, 00.34680.88820.9089yesN/A
Q724N6SYM_LISMF6, ., 1, ., 1, ., 1, 00.32820.91850.7293yesN/A
P59081SYM_THEEB6, ., 1, ., 1, ., 1, 00.33790.87680.8752yesN/A
Q68W54SYM_RICTY6, ., 1, ., 1, ., 1, 00.35640.90710.9447yesN/A
Q9PP85SYM_CAMJE6, ., 1, ., 1, ., 1, 00.34140.89200.75yesN/A
Q499X9SYMM_MOUSE6, ., 1, ., 1, ., 1, 00.44630.93750.8447yesN/A
Q81JA8SYM1_BACCR6, ., 1, ., 1, ., 1, 00.32060.91090.7287yesN/A
O05593SYM_MYCTU6, ., 1, ., 1, ., 1, 00.34170.88820.9036yesN/A
O14000SYMM_SCHPO6, ., 1, ., 1, ., 1, 00.38690.91850.8998yesN/A
Q899D9SYM_CLOTE6, ., 1, ., 1, ., 1, 00.35030.90340.7441yesN/A
Q92GS6SYM_RICCN6, ., 1, ., 1, ., 1, 00.34800.89770.9330yesN/A
Q8XHG1SYM_CLOPE6, ., 1, ., 1, ., 1, 00.34160.89580.7333yesN/A
Q96GW9SYMM_HUMAN6, ., 1, ., 1, ., 1, 00.44400.92990.8279yesN/A
Q8YH17SYM_BRUME6, ., 1, ., 1, ., 1, 00.34360.89390.9165yesN/A
P23395SYM_THET86, ., 1, ., 1, ., 1, 00.32630.89200.7621yesN/A
Q837B3SYM_ENTFA6, ., 1, ., 1, ., 1, 00.33010.92040.7264yesN/A
Q9RUF3SYM_DEIRA6, ., 1, ., 1, ., 1, 00.32610.87870.6813yesN/A
Q8RE57SYM_FUSNN6, ., 1, ., 1, ., 1, 00.32060.90150.7484yesN/A
Q8RDD1SYM_THETN6, ., 1, ., 1, ., 1, 00.35870.90900.7523yesN/A
Q9CD55SYM_MYCLE6, ., 1, ., 1, ., 1, 00.35530.89960.8845yesN/A
P59952SYM_MYCBO6, ., 1, ., 1, ., 1, 00.33980.88820.9036yesN/A
Q92PX0SYM_RHIME6, ., 1, ., 1, ., 1, 00.33910.90150.9224yesN/A
Q1RJZ5SYM_RICBR6, ., 1, ., 1, ., 1, 00.35580.90340.9371yesN/A
P22438SYMM_YEAST6, ., 1, ., 1, ., 1, 00.32040.94500.8678yesN/A
Q8Z068SYM_NOSS16, ., 1, ., 1, ., 1, 00.34800.89200.8886yesN/A
P37465SYM_BACSU6, ., 1, ., 1, ., 1, 00.32190.91470.7274yesN/A
O33925SYM_THEMA6, ., 1, ., 1, ., 1, 00.32420.89010.7472yesN/A
Q9VFL5SYMM_DROME6, ., 1, ., 1, ., 1, 00.49030.93370.8470yesN/A
Q97EW5SYM_CLOAB6, ., 1, ., 1, ., 1, 00.33770.90530.7422yesN/A
Q9CHE0SYM_LACLA6, ., 1, ., 1, ., 1, 00.32820.92230.7356yesN/A
Q81W03SYM1_BACAN6, ., 1, ., 1, ., 1, 00.32810.89390.7151yesN/A
P59078SYM_BRUSU6, ., 1, ., 1, ., 1, 00.34360.89390.9165yesN/A
Q98MV8SYM_RHILO6, ., 1, ., 1, ., 1, 00.34440.89010.9108yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.100.914
3rd Layer6.1.10.921

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 1e-164
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 1e-145
PRK12267 648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 1e-145
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 1e-125
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 1e-118
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 1e-117
PLN02224616 PLN02224, PLN02224, methionine-tRNA ligase 3e-96
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 8e-82
PRK00133 673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 1e-59
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 3e-33
cd07957129 cd07957, Anticodon_Ia_Met, Anticodon-binding domai 1e-31
PLN02610 801 PLN02610, PLN02610, probable methionyl-tRNA synthe 2e-31
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 5e-13
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 2e-10
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 2e-09
COG0060 933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 1e-08
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 9e-08
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 3e-07
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 8e-07
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 2e-06
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 5e-06
COG0495 814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 2e-05
COG0215464 COG0215, CysS, Cysteinyl-tRNA synthetase [Translat 4e-05
PRK00260463 PRK00260, cysS, cysteinyl-tRNA synthetase; Validat 2e-04
PRK05743 912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 2e-04
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 4e-04
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 7e-04
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 0.001
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 0.001
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 0.004
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information 
 Score =  475 bits (1225), Expect = e-164
 Identities = 196/526 (37%), Positives = 268/526 (50%), Gaps = 57/526 (10%)

Query: 4   STCFITTPIFYVNASPHIGHLYTALLADATHRFVKL----VNPRISSILTTGTDEHGLKI 59
              +ITTPI+Y N  PHIGH YT L AD   RF +L    V         TGTDEHG KI
Sbjct: 1   KKFYITTPIYYPNGKPHIGHAYTTLAADVLARFKRLRGYDV------FFLTGTDEHGQKI 54

Query: 60  QNAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDS 119
           Q  A +  +   +  ++ S  +K +++  +I Y  ++RTT   H   V  ++ +L     
Sbjct: 55  QRKAEEAGISPQELADRNSAAFKRLWEALNISYDDFIRTTDPRHKEAVQEIFQRLLANGD 114

Query: 120 IYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVE 179
           IY  KY+GWYCV  E F  E ++  D                       Y    +  PVE
Sbjct: 115 IYLGKYEGWYCVRCEEFYTESELIEDG----------------------YRCPPTGAPVE 152

Query: 180 WVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHW 239
           WVEE++Y F+LS Y + +    + N D ++P    N++ +       D+S+SR      W
Sbjct: 153 WVEEESYFFRLSKYQDKLLELYEANPDFIQPASRRNEVISFVKSGLKDLSISR--TNFDW 210

Query: 240 GIPVPDDDTQTIYVWLDALMNYLTVSGYPD--------FHT-WPPHIQILGKDILKFHGI 290
           GIPVP D    IYVW DAL NYLT  GYPD        F+  WP  + ++GKDIL+FH +
Sbjct: 211 GIPVPGDPKHVIYVWFDALTNYLTALGYPDDEELLAELFNKYWPADVHLIGKDILRFHAV 270

Query: 291 YWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREG 350
           YWPAFL+AAGL  PK    H   T+DG KMSKS+GNV+DP   + ++    +RYFLLRE 
Sbjct: 271 YWPAFLMAAGLPLPKRVFAHGFLTLDGEKMSKSLGNVIDPFDLVDEYGVDAVRYFLLREI 330

Query: 351 TNHSDSNYSETKAKNILNAELANTLGNLLNRCLS---KSINPDNVNPLVNRECYEVMFTK 407
               D ++S     N +NA+LAN LGNL  R LS   K  N D   P             
Sbjct: 331 PFGQDGDFSREAFINRINADLANDLGNLAQRTLSMIAK--NFDGKVPEPGALTEA----- 383

Query: 408 EPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE 467
                 L+E    L E V+       F K +++I+ ++  ANK+ID   PW+L K +  E
Sbjct: 384 ---DEALLEAAAALLERVRAAMDNLAFDKALEAILALVRAANKYIDEQAPWSLAKTDP-E 439

Query: 468 ELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDN 513
            L  VL    EVLR   + LQP++P+LA K+L +LG+  +E     
Sbjct: 440 RLATVLYTLLEVLRGIAVLLQPVMPELAAKILDQLGVEEDENRDFA 485

Length = 511
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|177869 PLN02224, PLN02224, methionine-tRNA ligase Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|153411 cd07957, Anticodon_Ia_Met, Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|215329 PLN02610, PLN02610, probable methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223293 COG0215, CysS, Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|234705 PRK00260, cysS, cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 528
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
PRK12267 648 methionyl-tRNA synthetase; Reviewed 100.0
PLN02224616 methionine-tRNA ligase 100.0
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
KOG0436|consensus578 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
PLN02943 958 aminoacyl-tRNA ligase 100.0
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 100.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PLN02381 1066 valyl-tRNA synthetase 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
PLN02843 974 isoleucyl-tRNA synthetase 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
KOG1247|consensus567 100.0
PLN02563963 aminoacyl-tRNA ligase 100.0
KOG0432|consensus 995 100.0
PLN02959 1084 aminoacyl-tRNA ligase 100.0
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
KOG0433|consensus 937 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
KOG0435|consensus876 100.0
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 100.0
KOG0434|consensus 1070 100.0
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 100.0
PLN02946557 cysteine-tRNA ligase 100.0
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 100.0
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 100.0
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 100.0
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 100.0
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 100.0
PRK12418384 cysteinyl-tRNA synthetase; Provisional 100.0
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 100.0
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 100.0
KOG0437|consensus 1080 100.0
KOG2007|consensus586 100.0
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 100.0
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 100.0
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 100.0
cd00674353 LysRS_core_class_I catalytic core domain of class 100.0
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 100.0
PRK12451562 arginyl-tRNA synthetase; Reviewed 100.0
PLN02286576 arginine-tRNA ligase 100.0
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.98
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.96
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.95
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 99.91
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 99.9
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 99.86
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.82
KOG4426|consensus656 99.77
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 99.72
KOG1195|consensus567 99.7
cd09287240 GluRS_non_core catalytic core domain of non-discri 99.6
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.59
PLN03233523 putative glutamate-tRNA ligase; Provisional 99.55
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.55
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.51
PRK12558445 glutamyl-tRNA synthetase; Provisional 99.51
PLN02907722 glutamate-tRNA ligase 99.48
PRK05347554 glutaminyl-tRNA synthetase; Provisional 99.46
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 99.46
PTZ00402601 glutamyl-tRNA synthetase; Provisional 99.46
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 99.45
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 99.44
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 99.43
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 99.43
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 99.43
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.42
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 99.4
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 99.39
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 99.38
PLN02859788 glutamine-tRNA ligase 99.37
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.36
PLN02627535 glutamyl-tRNA synthetase 99.34
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 99.33
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 99.33
cd00808239 GluRS_core catalytic core domain of discriminating 99.32
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.3
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.29
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 99.28
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 99.27
KOG1149|consensus524 99.13
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 99.13
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 98.84
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 98.69
KOG1147|consensus712 98.31
PRK13354410 tyrosyl-tRNA synthetase; Provisional 98.14
COG0180314 TrpS Tryptophanyl-tRNA synthetase [Translation, ri 98.11
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 98.02
KOG1148|consensus764 98.01
cd00395273 Tyr_Trp_RS_core catalytic core domain of tyrosinyl 98.01
PRK05912408 tyrosyl-tRNA synthetase; Validated 97.96
PRK12556332 tryptophanyl-tRNA synthetase; Provisional 97.91
PRK12284431 tryptophanyl-tRNA synthetase; Reviewed 97.89
PF05746119 DALR_1: DALR anticodon binding domain; InterPro: I 97.88
TIGR00233328 trpS tryptophanyl-tRNA synthetase. This model repr 97.85
PRK08560329 tyrosyl-tRNA synthetase; Validated 97.71
PLN02486383 aminoacyl-tRNA ligase 97.71
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 97.62
COG0162401 TyrS Tyrosyl-tRNA synthetase [Translation, ribosom 97.56
PTZ00126383 tyrosyl-tRNA synthetase; Provisional 97.55
smart00836122 DALR_1 DALR anticodon binding domain. This all alp 97.08
cd07963156 Anticodon_Ia_Cys Anticodon-binding domain of cyste 96.73
TIGR00234377 tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy 96.72
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 95.53
PF00579292 tRNA-synt_1b: tRNA synthetases class I (W and Y); 94.95
PF0919063 DALR_2: DALR domain; InterPro: IPR015273 The amino 93.65
PRK12282333 tryptophanyl-tRNA synthetase II; Reviewed 91.89
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 91.62
smart0084056 DALR_2 This DALR domain is found in cysteinyl-tRNA 90.42
PRK00927333 tryptophanyl-tRNA synthetase; Reviewed 90.27
PRK12283398 tryptophanyl-tRNA synthetase; Reviewed 88.35
PLN02886389 aminoacyl-tRNA ligase 86.27
PTZ00348 682 tyrosyl-tRNA synthetase; Provisional 84.0
PRK01233682 glyS glycyl-tRNA synthetase subunit beta; Validate 82.22
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 81.84
TIGR00211691 glyS glycyl-tRNA synthetase, tetrameric type, beta 80.1
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=1.8e-103  Score=812.92  Aligned_cols=493  Identities=37%  Similarity=0.613  Sum_probs=463.7

Q ss_pred             CCcEEEECCCCCCCCCChhhHHHHHHHHHHHHHHHHhcCCCCeeEEeecCCCcchHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy4049           3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQYK   82 (528)
Q Consensus         3 ~~~~~v~~~~P~~nG~lHiGH~~~~v~~D~~~R~lr~~~~G~~v~~v~g~d~~g~~i~~~a~~~g~~~~~~~~~~~~~~~   82 (528)
                      .++++||+|+|||||+|||||+++++.+|+++||+|++  |++|.|++|+|+||+||+.+|+++|++|+++|+++++.|+
T Consensus         4 ~~~~~VTtalpY~Ng~~HlGH~~~~l~ADv~aRy~Rl~--G~~v~fvtGtDeHGt~I~~~A~~~g~tP~el~d~~~~~~~   81 (558)
T COG0143           4 MKKILVTTALPYPNGPPHLGHLYTYLAADVYARYLRLR--GYEVFFLTGTDEHGTKIELKAEKEGITPQELVDKNHEEFK   81 (558)
T ss_pred             CCcEEEecCCCCCCCCcchhhHHHHHHHHHHHHHHHhc--CCeEEEEeccCCCCCHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             HHHhhcCcccCCCCCCCCHHHHHHHHHHHHHHhhCCCeeccceeeccccCcCccccccccccCCCc----hhhhhhhhcc
Q psy4049          83 LMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKN----EEESFLLEHQ  158 (528)
Q Consensus        83 ~~~~~l~i~~d~~~~t~~~~~~~~~~~~~~~L~~~g~iy~~~~~~~~~~~~~~~l~~~~v~~~~~~----~~~~~~~~~~  158 (528)
                      ++++.|+|++|.|+||+++.|.+.++++|.+|+++|+||.++..++||+.|++|++++++++.|+.    ...+..||.|
T Consensus        82 ~~~~~l~IsfD~F~rTt~~~h~~~vq~~f~~L~~~G~I~~~~~~~~Yc~~~e~fl~dr~v~g~cp~cg~~~arGD~Ce~C  161 (558)
T COG0143          82 ELFKALNISFDNFIRTTSPEHKELVQEFFLKLYENGDIYLREYEGLYCVSCERFLPDRYVEGTCPKCGGEDARGDQCENC  161 (558)
T ss_pred             HHHHHhCCcccccccCCCHHHHHHHHHHHHHHHHCCCEeccceeeeEcccccccccchheeccCCCcCccccCcchhhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999974    3456789999


Q ss_pred             CC-CCCCCCCcccccCCCCCcEEeeeceeeeeccccHHHHHHHHHhCCCcccchhhHHHHHHHHhccCCCccccccCCCc
Q psy4049         159 IR-PDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARV  237 (528)
Q Consensus       159 ~~-~~~~g~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~dw~isR~~~~~  237 (528)
                      +. +++.....|+|..||.+++++.+++|||+|+++++.+++|+++.+..+.|...++.+.+|++.|++||+|||++  +
T Consensus       162 g~~~~P~~l~~p~~~i~g~~p~~r~~~hyFf~L~~~~~~L~~~~~~~~~~~~p~~~~ne~~~~i~~GL~d~~IsR~~--~  239 (558)
T COG0143         162 GRTLDPTELINPVCVISGATPEVREEEHYFFRLSKFQDKLLEWYESNPDFIWPANRRNEVLNFLKEGLKDLSITRTD--L  239 (558)
T ss_pred             cCcCCchhcCCCeeEeeCCCcccccceeEEEEHHHhHHHHHHHHHhCccccCChHHHHHHHHHHHccCcccceecCC--C
Confidence            87 46766678999999999999999999999999999999999998878899999999999999999999999964  7


Q ss_pred             ccccccCCCCCCeEEEeccchhhhhhhhcCC----C---CCC-CCcc----ceEeeecccchhhhHHHHHHhhcCCCCCc
Q psy4049         238 HWGIPVPDDDTQTIYVWLDALMNYLTVSGYP----D---FHT-WPPH----IQILGKDILKFHGIYWPAFLIAAGLEPPK  305 (528)
Q Consensus       238 ~WG~~ip~~~~~~~~~wfds~~~~~~~~~~~----~---~~~-~~~d----i~~~G~D~~~~h~~~~~a~~~~~~~~~~~  305 (528)
                      .||+|+|+++++++||||||+++|++++|+.    .   |.. |+.+    +|++||||++||+++|||++++.|.+.|.
T Consensus       240 ~WGipvP~~p~kv~YVWfDAligYisa~~~~~~~~~~~~~~~~W~~~~~e~vhfIGKDii~FHav~wPamL~~~~~~lP~  319 (558)
T COG0143         240 DWGIPVPGDPGKVIYVWFDALIGYISALGELAEIGDDEDFKKFWPADDTELVHFIGKDIIRFHAVYWPAMLMAAGLPLPT  319 (558)
T ss_pred             CCCccCCCCCCCEEEEeeccHHHHHHHhcchhccCChHHHHhhCCCCCceEEEEeccccCcchhhHHHHHHHhCCCCCCC
Confidence            9999999999999999999999999999873    2   777 9887    99999999999999999999999999999


Q ss_pred             EEEEeeeeeeCCCcccccCCCccCcchhhhhcCchHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4049         306 SFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSK  385 (528)
Q Consensus       306 ~~~~hg~~~~~g~KmSkS~gn~i~~~~~~~~~~~d~lR~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~l~n~~~r~~~~  385 (528)
                      ++.+|||++++|+|||||+||+|++.++++.+|+|++||||++..|..+|.+|+++.+.+..|+++.+.++|+++|+.++
T Consensus       320 ~i~ahg~l~~~G~KmSKSrG~~V~~~~~~~~~~~D~lRYyL~~~~p~~~D~dFs~~~f~~rvN~dL~n~lgNl~~R~~~f  399 (558)
T COG0143         320 RIFAHGFLTLEGQKMSKSRGNVVDPDELLEQYGVDALRYYLARELPEGSDGDFSWEDFVERVNADLANKLGNLANRTLGF  399 (558)
T ss_pred             EEEeeeeEEECCccccccCCcEEeHHHHHHHcCchHhHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999997


Q ss_pred             cc-CCCCCCCCcccchhhhccCCChhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhHhhhccCcccccccC
Q psy4049         386 SI-NPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKEN  464 (528)
Q Consensus       386 ~~-~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~l~~~~~~v~~~~e~~~~~~~~~~l~~~~~~~n~y~~~~k~~~l~~~~  464 (528)
                      .. +.++.+|.... .     .. +.|+.++..+......+.++|+++++++|+..+++++...|+|++..+||.+.+++
T Consensus       400 i~k~~~g~vp~~~~-~-----~~-~~d~~~~~~~~~~~~~~~~~~e~~~~~~Al~~i~~l~~~~N~Yi~~~~PW~l~k~~  472 (558)
T COG0143         400 INKYFDGVVPAAGA-P-----DL-EEDEELLALAREALEAVAEAMEKYEFRKALEEIMALASRANKYIDEQAPWKLAKED  472 (558)
T ss_pred             HHhccCCcCCcccc-c-----cc-hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhcCCCchhhccC
Confidence            64 45566655321 0     12 67889999999999999999999999999999999999999999999999998885


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHcCCCC
Q psy4049         465 KIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPT  506 (528)
Q Consensus       465 ~~~~~~~~~~~l~~~l~~l~~ll~P~~P~~~e~l~~~l~~~~  506 (528)
                      .++++.++++.+.++++.++.+|+||||+++++||+.|+.+.
T Consensus       473 ~~~~~~~vl~~~~~~~r~la~ll~P~mP~~a~ki~~~L~~~~  514 (558)
T COG0143         473 KRERLATVLYLALELVRVLAILLYPFMPETAEKIWDQLGLEE  514 (558)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCcCcchHHHHHHHhCCcc
Confidence            578889999999999999999999999999999999999864

>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0436|consensus Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>KOG1247|consensus Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0432|consensus Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0433|consensus Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG0435|consensus Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>KOG0434|consensus Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG0437|consensus Back     alignment and domain information
>KOG2007|consensus Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>KOG4426|consensus Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1195|consensus Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>KOG1149|consensus Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>KOG1147|consensus Back     alignment and domain information
>PRK13354 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1148|consensus Back     alignment and domain information
>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK05912 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PRK12556 tryptophanyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12284 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF05746 DALR_1: DALR anticodon binding domain; InterPro: IPR008909 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00233 trpS tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK08560 tyrosyl-tRNA synthetase; Validated Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00126 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>smart00836 DALR_1 DALR anticodon binding domain Back     alignment and domain information
>cd07963 Anticodon_Ia_Cys Anticodon-binding domain of cysteinyl tRNA synthetases Back     alignment and domain information
>TIGR00234 tyrS tyrosyl-tRNA synthetase Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF09190 DALR_2: DALR domain; InterPro: IPR015273 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>smart00840 DALR_2 This DALR domain is found in cysteinyl-tRNA-synthetases Back     alignment and domain information
>PRK00927 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12283 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02886 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00348 tyrosyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01233 glyS glycyl-tRNA synthetase subunit beta; Validated Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information
>TIGR00211 glyS glycyl-tRNA synthetase, tetrameric type, beta subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
3tun_A542 Trypanosoma Brucei Methionyl-Trna Synthetase In Com 3e-92
4eg1_A542 Trypanosoma Brucei Methionyl-Trna Synthetase In Com 4e-92
4eg5_A542 Trypanosoma Brucei Methionyl-Trna Synthetase In Com 4e-92
3kfl_A564 Leishmania Major Methionyl-Trna Synthetase In Compl 3e-90
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 8e-86
2csx_A497 Crystal Structure Of Aquifex Aeolicus Methionyl-Trn 9e-86
4dlp_A536 Crystal Structure Of Methionyl-Trna Synthetase Metr 1e-84
1a8h_A500 Methionyl-Trna Synthetase From Thermus Thermophilus 4e-75
1woy_A500 Crystal Structure Of Methionyl Trna Synthetase Y225 1e-74
2d54_A502 Crystal Structure Of Methionyl Trna Synthetase Y225 3e-74
1rqg_A 722 Methionyl-Trna Synthetase From Pyrococcus Abyssi Le 7e-34
1p7p_A551 Methionyl-trna Synthetase From Escherichia Coli Com 7e-31
1f4l_A551 Crystal Structure Of The E.Coli Methionyl-Trna Synt 7e-31
3h9c_A547 Structure Of Methionyl-Trna Synthetase: Crystal For 7e-31
1qqt_A551 Methionyl-Trna Synthetase From Escherichia Coli Len 3e-30
3h97_A560 Structure Of A Mutant Methionyl-trna Synthetase Wit 3e-28
1gax_A 862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 7e-04
>pdb|3TUN|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex With Inhibitor Chem 1356 Length = 542 Back     alignment and structure 
Iteration: 1

 Score =  335 bits (860), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 189/525 (36%), Positives = 280/525 (53%), Gaps = 42/525 (8%)
Query: 1   RFKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQ 60
           + +   F+T+PI+YVNA+PHIGH+Y+ L+ D   R+ ++   R+ ++  TGTDEHG K+ 
Sbjct: 6   KVEKVFFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVKGERVFAL--TGTDEHGQKVA 63
Query: 61  NAAIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSI 120
            AA + ++   DF   ++ ++K  F+  D    +++RTT+E H   V  +WTKL+Q+  I
Sbjct: 64  EAAKQKQVSPYDFTTAVAGEFKKXFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDI 123
Query: 121 YPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEW 180
           Y  +Y+GWY +S+ESFL    I                   D+      VS+ES   V W
Sbjct: 124 YLGRYEGWYSISDESFLTPQNITDGV---------------DKDGNPCKVSLESGHVVTW 168
Query: 181 VEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVH-W 239
           V E+NYMF+LS +   +  W   N   + P+    ++     +   D+SVSR +A +H W
Sbjct: 169 VSEENYMFRLSAFRERLLEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRARATLHNW 228
Query: 240 GIPVPDDDTQTIYVWLDALMNYLT---------------VSGYPDFHTWPPHIQILGKDI 284
            IPVP +    +YVWLDAL NYLT               V  + +   +P  + ++GKDI
Sbjct: 229 AIPVPGNPDHXVYVWLDALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDI 288
Query: 285 LKFHGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRY 344
           LKFH IYWPAFL++AGL  PK  + H  WT D  K+SKS+GNV DP+ K  +F    L+Y
Sbjct: 289 LKFHAIYWPAFLLSAGLPLPKKIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKY 348
Query: 345 FLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVM 404
           FLLRE     D +YS+      LN ELA+TLGNL+ RC S  IN +   P          
Sbjct: 349 FLLRESGFSDDGDYSDKNMIARLNGELADTLGNLVMRCTSAKINVNGEWP------SPAA 402
Query: 405 FTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKEN 464
           +T+E     LI+  + L      +Y   +  K + ++  VL   N ++    PW L K +
Sbjct: 403 YTEED--ESLIQLIKDLPGTADHYYLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTD 460
Query: 465 KIEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNER 509
             E L  VL +T E +R+  + L PI+P+ +  +   LG+P   R
Sbjct: 461 P-ERLRTVLYITLEGVRVTTLLLSPILPRKSVVIFDMLGVPEVHR 504
>pdb|4EG1|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex With Substrate Methionine Length = 542 Back     alignment and structure
>pdb|4EG5|A Chain A, Trypanosoma Brucei Methionyl-Trna Synthetase In Complex With Inhibitor Chem 1312 Length = 542 Back     alignment and structure
>pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With Methionyladenylate And Pyrophosphate Length = 564 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) Length = 497 Back     alignment and structure
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From Brucella Melitensis Bound To Selenomethionine Length = 536 Back     alignment and structure
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a Mutant From Thermus Thermophilus Length = 502 Back     alignment and structure
>pdb|1RQG|A Chain A, Methionyl-Trna Synthetase From Pyrococcus Abyssi Length = 722 Back     alignment and structure
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate Length = 551 Back     alignment and structure
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Back     alignment and structure
>pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2 Length = 547 Back     alignment and structure
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Back     alignment and structure
>pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-trna Synthetase With Modified Specificity Length = 560 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query528
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 0.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 0.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 0.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 0.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 0.0
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 1e-174
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 1e-92
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 3e-73
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-13
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 2e-11
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 5e-04
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 2e-09
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 1e-08
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 9e-06
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 9e-05
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 5e-04
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 8e-04
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
 Score =  597 bits (1542), Expect = 0.0
 Identities = 184/526 (34%), Positives = 273/526 (51%), Gaps = 41/526 (7%)

Query: 3   KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNA 62
           +   F TTPI+YVNASPHIGH+Y+ L+ D   R+ ++    +   + TGTDEHG K+  A
Sbjct: 25  QKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGEEV--FVMTGTDEHGQKVAEA 82

Query: 63  AIKHKLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYP 122
           A K  +  +DF   +S ++K  F+  + +  +++RTT+  H + V  +W KL  +  IY 
Sbjct: 83  AAKQGVSPMDFTTSVSSEFKQCFQEMNYDMNYFIRTTNPTHEKLVQDIWKKLAAKGDIYL 142

Query: 123 NKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVE 182
            KY+GWY VS+ESFL    +                   D   +   VS+ES   V WVE
Sbjct: 143 GKYEGWYSVSDESFLTAQNVADGV---------------DRDGKPCKVSLESGHVVTWVE 187

Query: 183 EQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKA-RVHWGI 241
           E+NYMF+LS +   +  +   + + + P+    ++     +   D+S+SR +   ++W I
Sbjct: 188 EENYMFRLSAFRERLLKYFHDHPNCIVPEFRRREVIKTVEKGLFDLSISRKRESVMNWSI 247

Query: 242 PVPDDDTQTIYVWLDALMNYLTVSGYPDFHT--------------WPPHIQILGKDILKF 287
           PVP D+   IYVWLDAL NY T +                     WP  + ++GKDILKF
Sbjct: 248 PVPGDERHCIYVWLDALFNYYTGALTRVATDGTETLDEDHHALNRWPADVHVVGKDILKF 307

Query: 288 HGIYWPAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLL 347
           H IYWPAFL++A L  P+  + H  WT D  K+SKS+GN  DP+ K  +F    L+YFL+
Sbjct: 308 HAIYWPAFLMSAELPLPERLVSHGWWTKDHKKISKSLGNAFDPVEKAKEFGIDALKYFLM 367

Query: 348 REGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSKSINPDNVNPLVNRECYEVMFTK 407
           RE     D +YS+      LN ELA+TLGNL++RC++  IN + + P             
Sbjct: 368 RESNFQDDGDYSDKNMVARLNGELADTLGNLVSRCVAPKINVNGMWPEPAEY-------- 419

Query: 408 EPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENKIE 467
                 LI +   L   V  +Y   +    + +I  VL   N ++    PW L K +   
Sbjct: 420 SESDKTLIASLNNLAGTVDHYYCLPDIQHALIAIFDVLRSLNAYVTENAPWKLVKMDT-A 478

Query: 468 ELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTNERLWDN 513
            L  VL VT E LRIC + LQP++P+ A +++  LG+P   R+   
Sbjct: 479 RLGTVLYVTMEGLRICTMFLQPVMPQKAKEIMDALGVPEAARVGME 524
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Length = 414 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Length = 462 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 100.0
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 100.0
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 100.0
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 100.0
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 100.0
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 100.0
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 100.0
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 100.0
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 100.0
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 100.0
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 100.0
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 100.0
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 100.0
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 100.0
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 100.0
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.98
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 99.78
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 99.73
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 99.66
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 99.64
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 99.64
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 99.55
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 99.54
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 99.53
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 99.47
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 99.45
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 99.43
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 99.18
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 98.6
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 98.25
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 98.2
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 98.16
3vgj_A373 Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; 98.03
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 97.97
2el7_A337 Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synth 97.91
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 97.77
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 97.77
3p0j_A 690 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 97.71
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 97.68
1r6u_A437 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 97.56
1r6t_A477 Tryptophanyl-tRNA synthetase; class IC tRNA synthe 97.44
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 97.38
2cyc_A375 Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacy 97.33
2j5b_A348 Tyrosyl-tRNA synthetase; ligase, protein biosynthe 97.28
2yxn_A322 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 96.56
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.41
1h3f_A432 Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA sy 96.3
2jan_A432 Tyrosyl-tRNA synthetase; protein biosynthesis, ami 96.07
1jil_A420 Tyrrs, tyrosyl-tRNA synthetase; truncation, based 95.99
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 95.98
2ts1_A419 Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30 95.96
1y42_X392 Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tR 95.1
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 94.94
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 94.82
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 94.79
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 94.77
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 94.68
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 94.57
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 94.49
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 91.23
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 91.12
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 90.69
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 90.67
3i05_A395 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP 90.62
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 87.32
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 87.19
2ip1_A432 Tryptophanyl-tRNA synthetase; rossmann fold, struc 87.09
1yi8_B351 Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2. 87.05
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 86.89
3prh_A388 Tryptophanyl-tRNA synthetase; TRPRS, protein biosy 86.55
3tze_A406 Tryptophanyl-tRNA synthetase; structural genomics, 86.1
3n9i_A346 Tryptophanyl-tRNA synthetase; tryptophan-tRNA liga 85.6
3a04_A372 Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tR 85.18
3sz3_A341 Tryptophanyl-tRNA synthetase; structural genomics, 82.72
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
Probab=100.00  E-value=9.5e-98  Score=799.54  Aligned_cols=480  Identities=39%  Similarity=0.682  Sum_probs=443.5

Q ss_pred             CCCcEEEECCCCCCCCCChhhHHHHHHHHHHHHHHHHhcCCCCeeEEeecCCCcchHHHHHHHHcCCCHHHHHHHHHHHH
Q psy4049           2 FKSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLETIDFCNKISDQY   81 (528)
Q Consensus         2 ~~~~~~v~~~~P~~nG~lHiGH~~~~v~~D~~~R~lr~~~~G~~v~~v~g~d~~g~~i~~~a~~~g~~~~~~~~~~~~~~   81 (528)
                      .+|+||||+|+||+||.|||||+++++++|+++||+||+  |++|++++|+||||+||+.+|+++|++|+++|+++.+.|
T Consensus         7 ~~k~f~Ittp~pY~nG~lHiGHa~~~~~~Dii~Ry~r~~--G~~v~~v~G~D~hG~~ie~~a~k~g~~~~e~~~~~~~~~   84 (542)
T 3u1f_A            7 VEKVFFVTSPIYYVNAAPHIGHVYSTLITDVIGRYHRVK--GERVFALTGTDEHGQKVAEAAKQKQVSPYDFTTAVAGEF   84 (542)
T ss_dssp             CCCCEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEECCSHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             CCCCEEEeCCCCCCCCchhhHHHHHHHHHHHHHHHHHhc--CCCccccCccCcChHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999999  999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcccCCCCCCCCHHHHHHHHHHHHHHhhCCCeeccceeeccccCcCccccccccccCCCchhhhhhhhccCCC
Q psy4049          82 KLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRP  161 (528)
Q Consensus        82 ~~~~~~l~i~~d~~~~t~~~~~~~~~~~~~~~L~~~g~iy~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~  161 (528)
                      ++++++|||++|.+++|+++.|.+.++++|.+|+++|+||++.++++||+.|+++++++++.+.|               
T Consensus        85 ~~~~~~lgi~~D~~~~T~~~~~~~~v~~~f~~L~~~G~iy~~~~~v~~~~~~~~~l~d~~v~~~~---------------  149 (542)
T 3u1f_A           85 KKCFEQMDYSIDYFIRTTNEQHKAVVKELWTKLEQKGDIYLGRYEGWYSISDESFLTPQNITDGV---------------  149 (542)
T ss_dssp             HHHHHHHTCCCSEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEEECGGGEEEEE---------------
T ss_pred             HHHHHHhCCccCcCccCCCHHHHHHHHHHHHHHhhcCcEEecceeEEeeccCcccchhhhhhccc---------------
Confidence            99999999999999999999999999999999999999999999999999999999999999875               


Q ss_pred             CCCCCCcccccCCCCCcEEeeeceeeeeccccHHHHHHHHHhCCCcccchhhHHHHHHHHhccCCCccccccCCC-cccc
Q psy4049         162 DEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKAR-VHWG  240 (528)
Q Consensus       162 ~~~g~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~dw~isR~~~~-~~WG  240 (528)
                      +.+|..++.|++||++++++.++|||++++++++.+.+|++..+..+.|+..++.+.+|++++++|||||||+.. ..||
T Consensus       150 ~~~g~~~~~~~~sg~~ve~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~P~~~~~~~~~~~~~~l~Dw~ISRq~~~~~~WG  229 (542)
T 3u1f_A          150 DKDGNPCKVSLESGHVVTWVSEENYMFRLSAFRERLLEWYHANPGCIVPEFRRREVIRAVEKGLPDLSVSRARATLHNWA  229 (542)
T ss_dssp             CTTSCEEEEETTTCCBEEEEEEEEEEECGGGGHHHHHHHHHHCTTSEESHHHHHHHHHHHHHCCCCEECEEEGGGGTTCS
T ss_pred             cccCccccccCCCCCcceeeccccceecchhHHHHHHHHHhhcccccCCchhhHhHhhhhhccccccCccccccCcCCCC
Confidence            556788889999999999999999999999999999999999888899999999999999999999999999610 1399


Q ss_pred             cccCCCCCCeEEEeccchhhhhhhhcCC-----------C-CC--C-CCccceEeeecccchhhhHHHHHHhhcCCCCCc
Q psy4049         241 IPVPDDDTQTIYVWLDALMNYLTVSGYP-----------D-FH--T-WPPHIQILGKDILKFHGIYWPAFLIAAGLEPPK  305 (528)
Q Consensus       241 ~~ip~~~~~~~~~wfds~~~~~~~~~~~-----------~-~~--~-~~~di~~~G~D~~~~h~~~~~a~~~~~~~~~~~  305 (528)
                      +|||.+++++++||||+..+|+++.++.           + +.  . ||.|+|++|+||++||+.+|++++.+.|.++++
T Consensus       230 ipiP~~~~~~~~vw~da~~~~~~~~~~~~~~~g~~~~~~d~~~~~~~~p~d~~~~G~D~~~fh~~~~~a~l~~~g~~~~~  309 (542)
T 3u1f_A          230 IPVPGNPDHXVYVWLDALTNYLTGSRLRVDESGKEVSLVDDFNELERFPADVHVIGKDILKFHAIYWPAFLLSAGLPLPK  309 (542)
T ss_dssp             CEETTEEEEEECHHHHHHTHHHHHHTEEECTTSCEEEECSSGGGTTCCSCSEEEEEGGGHHHHHTHHHHHHHHHTCCCCS
T ss_pred             CccCCCcCeeeeeeeccchhhhhhhhccccccCCcccccchhhhhcCCcceEEEecccccccccchhHHHHHhhcccccc
Confidence            9999999999999999999999887531           1 11  2 799999999999999999999999999999999


Q ss_pred             EEEEeeeeeeCCCcccccCCCccCcchhhhhcCchHHHHHHHhcCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4049         306 SFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNILNAELANTLGNLLNRCLSK  385 (528)
Q Consensus       306 ~~~~hg~~~~~g~KmSkS~gn~i~~~~~~~~~~~d~lR~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~l~n~~~r~~~~  385 (528)
                      .+++||+++.+|+|||||+||+|+|.|++++||+|++|||+++.+++++|++|+++.+.+..++++.++++|+++|+...
T Consensus       310 ~v~~hg~l~~~G~KMSKSlGNvi~p~~~i~~ygaD~lR~~l~~~~~~~~d~~fs~~~~~~~~n~~l~n~l~N~~~r~~~~  389 (542)
T 3u1f_A          310 KIVAHGWWTKDRKKISKSLGNVFDPVEKAEEFGYDALKYFLLRESGFSDDGDYSDKNMIARLNGELADTLGNLVMRCTSA  389 (542)
T ss_dssp             CEEEECCCEETTBCCBTTTTBCCCHHHHHHHHCHHHHHHHHHHHCCTTSCCEECHHHHHHHHHHTTTTTHHHHHHHHHCT
T ss_pred             eeccccceecCCceeccccCCCCChhHHHhhcCchHHHHHHHhcCcccccccccHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998888999999999999888888999999999999876


Q ss_pred             ccCCCCCCCCcccchhhhccCCChhHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhHhhhccCcccccccCc
Q psy4049         386 SINPDNVNPLVNRECYEVMFTKEPVLTELIENCQTLHEDVKLHYSEFNFYKGVDSIILVLHLANKFIDTTKPWTLRKENK  465 (528)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~l~~~~~~v~~~~e~~~~~~~~~~l~~~~~~~n~y~~~~k~~~l~~~~~  465 (528)
                      ..+..+..+..        ......|+++++++.++.+++.++|++|++++|++.|++|++.+|+|++..+||.+.+++ 
T Consensus       390 ~~~~~~~~~~~--------~~~~~~d~~il~~l~~~~~~~~~~~~~~~~~~a~~~i~~~~~~~n~Y~~~~~pw~l~k~d-  460 (542)
T 3u1f_A          390 KINVNGEWPSP--------AAYTEEDESLIQLIKDLPGTADHYYLIPDIQKAIIAVFDVLRAINAYVTDMAPWKLVKTD-  460 (542)
T ss_dssp             TTSTTSBCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-
T ss_pred             hhcccCCCCcc--------chhhHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcCC-
Confidence            55544433321        124678999999999999999999999999999999999999999999999999887664 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHcCCCCc
Q psy4049         466 IEELNLVLGVTFEVLRICGIGLQPIVPKLADKLLTRLGIPTN  507 (528)
Q Consensus       466 ~~~~~~~~~~l~~~l~~l~~ll~P~~P~~~e~l~~~l~~~~~  507 (528)
                      .++++++++++.++++.+++||+||||+++|+||+.|+.+..
T Consensus       461 ~~~~~~~l~~~~~~l~~~~~ll~P~~P~~aeei~~~Lg~~~~  502 (542)
T 3u1f_A          461 PERLRTVLYITLEGVRVTTLLLSPILPRKSVVIFDMLGVPEV  502 (542)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHCCCCCc
Confidence            556788899999999999999999999999999999998653
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>3vgj_A Tyrosyl-tRNA synthetase, putative; tyrrs, ligase; HET: YAP; 2.21A {Plasmodium falciparum} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>2el7_A Tryptophanyl-tRNA synthetase; aminoacyl-tRNA synthetase, translation, structural GEN NPPSFA; 2.50A {Thermus thermophilus} Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A* Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>1r6u_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytic domain, AN recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.00A {Homo sapiens} SCOP: c.26.1.1 PDB: 1ulh_A 2dr2_A* 2ake_A* 1o5t_A Back     alignment and structure
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics; HET: TYR; 2.20A {Pyrococcus horikoshii} Back     alignment and structure
>2j5b_A Tyrosyl-tRNA synthetase; ligase, protein biosynthesis, ATP-binding; HET: TYE; 2.20A {Acanthamoeba polyphaga mimivirus} Back     alignment and structure
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A* Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A* Back     alignment and structure
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis} Back     alignment and structure
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A* Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A Back     alignment and structure
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>3i05_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, LIG nucleotide-binding, protein biosynthesis; 2.80A {Trypanosoma brucei} SCOP: c.26.1.0 Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A* Back     alignment and structure
>1yi8_B Tryptophanyl-tRNA synthetase; ligase; HET: TRP; 2.10A {Deinococcus radiodurans} PDB: 1yia_B* 1yid_B* 2a4m_A* Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3prh_A Tryptophanyl-tRNA synthetase; TRPRS, protein biosynthesis, translation, class I tRNA synth rossman fold, high motif, KMSKS motif; 2.80A {Bacillus subtilis} Back     alignment and structure
>3tze_A Tryptophanyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, amino acylation; HET: TRP; 2.60A {Encephalitozoon cuniculi} Back     alignment and structure
>3n9i_A Tryptophanyl-tRNA synthetase; tryptophan-tRNA ligase, csgid, structural genomics, niaid, center for structural genomics infectious diseases; 1.95A {Yersinia pestis} SCOP: c.26.1.1 Back     alignment and structure
>3a04_A Tryptophanyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding, protein biosynthesis; 1.97A {Aeropyrum pernix} PDB: 3a05_A* Back     alignment and structure
>3sz3_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, rossmann fold; HET: TRP; 1.50A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 528
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 2e-59
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 7e-49
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 2e-45
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 3e-40
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 1e-34
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 3e-29
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 5e-24
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 2e-05
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 3e-19
d2d5ba1152 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (Me 8e-14
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 1e-13
d1pfva1162 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (Me 3e-09
d1rqga1210 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (Me 2e-05
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Methionyl-tRNA synthetase (MetRS)
species: Escherichia coli [TaxId: 562]

 Score =  198 bits (503), Expect = 2e-59
 Identities = 76/382 (19%), Positives = 147/382 (38%), Gaps = 52/382 (13%)

Query: 7   FITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKH 66
            +T  + Y N S H+GH+   + AD   R+ ++    +        D HG  I   A + 
Sbjct: 5   LVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEV--NFICADDAHGTPIMLKAQQL 62

Query: 67  KLETIDFCNKISDQYKLMFKTYDIEYTHYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYK 126
            +       ++S +++  F  ++I Y +Y  T SE + +    ++++LK+   I      
Sbjct: 63  GITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTIS 122

Query: 127 GWYCVSEESFLLEHQIRPDEKNEEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNY 186
             Y   +  FL +  +                               S       + +++
Sbjct: 123 QLYDPEKGMFLPDRFV------------------------------VSGATPVMRDSEHF 152

Query: 187 MFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDISVSRPKARVHWGIPVPDD 246
            F L ++   +  W          ++  N+++           +SR     ++G  +P+ 
Sbjct: 153 FFDLPSFSEMLQAWTRSGAL---QEQVANKMQEWFESGLQQWDISRD--APYFGFEIPNA 207

Query: 247 DTQTIYVWLDALMNYLTVSGYP--------------DFHTWPPHIQILGKDILKFHGIYW 292
             +  YVWLDA + Y+                       +       +GKDI+ FH ++W
Sbjct: 208 PGKYFYVWLDAPIGYMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFHSLFW 267

Query: 293 PAFLIAAGLEPPKSFLVHSHWTVDGVKMSKSVGNVVDPMSKLSDFTSCGLRYFLLREGTN 352
           PA L  +    P +  VH + TV+G KMSKS G  +   + L+ F +  LRY+   + ++
Sbjct: 268 PAMLEGSNFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNHFDADSLRYYYTAKLSS 327

Query: 353 -HSDSNYSETKAKNILNAELAN 373
              D + +       +NA++ N
Sbjct: 328 RIDDIDLNLEDFVQRVNADIVN 349
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 152 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 162 Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 210 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query528
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 100.0
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 100.0
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.95
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 99.89
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 99.88
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.64
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.59
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 99.57
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.55
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.52
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.48
d1ffya1 273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.46
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.43
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 99.3
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 99.26
d1f7ua1124 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.06
d1iq0a1126 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 97.98
d1h3fa1343 Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophi 97.97
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 97.83
d1n3la_339 Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapie 97.63
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 95.54
d1li5a187 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 93.98
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 92.19
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 91.81
d1i6la_326 Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus ste 88.94
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 85.68
d1jila_323 Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus au 83.75
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 83.12
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=9.7e-65  Score=528.36  Aligned_cols=332  Identities=21%  Similarity=0.282  Sum_probs=296.9

Q ss_pred             CCcEEEECCCCCCCCCChhhHHHHHHHHHHHHHHHHhcCCCCeeEEeecCCCcchHHHHHHHHcCCCH------------
Q psy4049           3 KSTCFITTPIFYVNASPHIGHLYTALLADATHRFVKLVNPRISSILTTGTDEHGLKIQNAAIKHKLET------------   70 (528)
Q Consensus         3 ~~~~~v~~~~P~~nG~lHiGH~~~~v~~D~~~R~lr~~~~G~~v~~v~g~d~~g~~i~~~a~~~g~~~------------   70 (528)
                      +++|+|+.||||+||.|||||+++++++|+++||+||+  |++|++++|+|+||+||+.++++.|.++            
T Consensus        47 ~~~f~~~~~pPy~nG~lHiGH~~~~~~~Dv~~Ry~rm~--G~~V~~~~G~D~~G~pie~~~~~~~~~~~~~~~~~~~~~~  124 (450)
T d1ffya3          47 NETFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQ--GFYAPYVPGWDTHGLPIEQALTKKGVDRKKMSTAEFREKC  124 (450)
T ss_dssp             SCBCCEECCCCBSSSCCCHHHHHHHHHHHHHHHHHHTT--TCBCCCCCEEBCCSHHHHHHHHHHTCCSTTTCHHHHHHHH
T ss_pred             CCcEEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHhc--CCccccccccccCCcHHHHHHHhhCCccccccHHHHhhhc
Confidence            46799999999999999999999999999999999999  9999999999999999999999988765            


Q ss_pred             HHHHHHHHHHHHHHHhhcCcccC--CCCCCCCHHHHHHHHHHHHHHhhCCCeeccceeeccccCcCccccccccccCCCc
Q psy4049          71 IDFCNKISDQYKLMFKTYDIEYT--HYVRTTSEHHFRTVNTVWTKLKQRDSIYPNKYKGWYCVSEESFLLEHQIRPDEKN  148 (528)
Q Consensus        71 ~~~~~~~~~~~~~~~~~l~i~~d--~~~~t~~~~~~~~~~~~~~~L~~~g~iy~~~~~~~~~~~~~~~l~~~~v~~~~~~  148 (528)
                      .+++..+.+.+++.+++||+..|  ..+.|+++.|.+.++++|.+|+++|+||++.++++|||.|++++++.+++..   
T Consensus       125 ~~~~~~~~~~~~~~~~~lg~~~D~~~~~~T~~~~~~~~v~~~f~~l~~~G~iy~~~~~v~~~p~~~~~~~~~e~~~~---  201 (450)
T d1ffya3         125 KEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYP---  201 (450)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECCGGGEEEE---
T ss_pred             chhhhhhhhhHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHcCCeeccccccccccccCccccccccccc---
Confidence            45678889999999999999877  6678999999999999999999999999999999999999999999988875   


Q ss_pred             hhhhhhhhccCCCCCCCCCcccccCCCCCcEEeeeceeeeeccccHHHHHHHHHhCCCcccchhhHHHHHHHHhccCCCc
Q psy4049         149 EEESFLLEHQIRPDEKNEGQYVSIESNQPVEWVEEQNYMFKLSNYINDVAHWLDKNEDVVKPKKFYNQLRNMCSEIENDI  228 (528)
Q Consensus       149 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~dw  228 (528)
                                           .|++|+.+++.+..+|||+++..+++.+.+++....  +.|...+..+..|+++ ++||
T Consensus       202 ---------------------~~~r~~~~~~~~~~~qwf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~Dw  257 (450)
T d1ffya3         202 ---------------------HDWRTKKPVIFRATPQWFASISKVRQDILDAIENTN--FKVNWGKTRIYNMVRD-RGEW  257 (450)
T ss_dssp             ---------------------EETTTCCBCEEEEEEEEEECHHHHHHHHHHHHHTSE--ESSHHHHHHHHHHHHH-CCCE
T ss_pred             ---------------------ccccccCCceeeccccceeccccccccchhhccccc--ccccccceeeeccccC-ccch
Confidence                                 489999999999999999999999999999988774  8899999999999998 9999


Q ss_pred             cccccCCCcccccccCCC------------------------------------------------------CCCeEEEe
Q psy4049         229 SVSRPKARVHWGIPVPDD------------------------------------------------------DTQTIYVW  254 (528)
Q Consensus       229 ~isR~~~~~~WG~~ip~~------------------------------------------------------~~~~~~~w  254 (528)
                      |||||+   +||+|+|..                                                      +.+++|+|
T Consensus       258 ~iSRqr---~WG~piP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvld~w  334 (450)
T d1ffya3         258 VISRQR---VWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDIMDVW  334 (450)
T ss_dssp             ECEESC---SSSCBCCCEECTTSCEECCHHHHHHHHHHHHHHCTHHHHHSCHHHHSSTTCCCSSCTTSCCEECCCEECHH
T ss_pred             heeeec---ccccCcceeecCCCCEecchhhhHHHHHhhhhcCccccccccccccccccccccCCCCCcceeeeeeeccc
Confidence            999996   899999930                                                      35789999


Q ss_pred             ccchhhhhhhhcCCCCCCCCccceEeeecccchh-hhHHHHHHhhcCCCCCcEEEEeeee-eeCCCcccccCCCccCcch
Q psy4049         255 LDALMNYLTVSGYPDFHTWPPHIQILGKDILKFH-GIYWPAFLIAAGLEPPKSFLVHSHW-TVDGVKMSKSVGNVVDPMS  332 (528)
Q Consensus       255 fds~~~~~~~~~~~~~~~~~~di~~~G~D~~~~h-~~~~~a~~~~~~~~~~~~~~~hg~~-~~~g~KmSkS~gn~i~~~~  332 (528)
                      |+|++++.+.++.+....||.|++++|+||+++| ...+...+...|..||+++++||++ ..+|+|||||+||+|+|.|
T Consensus       335 fds~~~~~~~~~~~~~~~~P~d~~~~G~Di~r~w~~~~~~~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GN~I~p~d  414 (450)
T d1ffya3         335 FDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQ  414 (450)
T ss_dssp             HHHHTHHHHTTTTSTTCCSSBSEEEEEGGGGTTHHHHHHHHHHHHHSSCSBSEEEEECCEECTTSCCCCSSSSCCCCHHH
T ss_pred             ccccccccccccccccccCCCcccccCcchhhHHHHHHHHHHHHhcCCCCcceEEEcceEECCCCCCCCCCCCCCcCHHH
Confidence            9999988887766433338999999999999852 3333334455688899999999997 6899999999999999999


Q ss_pred             hhhhcCchHHHHHHHhcCCCCCCCCcCHHHHHHHH
Q psy4049         333 KLSDFTSCGLRYFLLREGTNHSDSNYSETKAKNIL  367 (528)
Q Consensus       333 ~~~~~~~d~lR~~~~~~~~~~~~~~f~~~~~~~~~  367 (528)
                      ++++||+|++|||+++. ++.+|++|+++.+++..
T Consensus       415 ii~~yGaDalR~~l~s~-~~~~D~~fs~~~l~~~~  448 (450)
T d1ffya3         415 VVKQKGADIARLWVSST-DYLADVRISDEILKQTS  448 (450)
T ss_dssp             HHHHTCHHHHHHHHHTS-CTTSCEECCHHHHHHHH
T ss_pred             HHHHhCcHHHHHHHHcC-CCCCCcCcCHHHHHHhh
Confidence            99999999999999964 56999999999998763
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f7ua1 a.27.1.1 (A:484-607) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1li5a1 a.27.1.1 (A:316-402) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure