Psyllid ID: psy4075

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MPIEDNTNNTGTAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER
Secondary Structure (PSIPRED)
cccccccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEEEccccccccccccccccEccccccHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mpiedntnntgTAEVLKVIKssdskegdgpglkkprldlhalptrqyldqTVVPILLAALTQLTKER
Flexible Loop (DISEMBL)
mpiedntnntgtaEVLKVIkssdskegdgpglkkprldlHALPtrqyldqtvvPILLAALTQLTKER
Low Complexity Region (SEG)
MPIEDNTNNTGTAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER
Disordered region (IsUnstruct)
**************************************LHALPTRQYLDQTVVPILLAALTQ*****
Disordered Region (DISOPRED)
*****************************************LPTRQYLDQTVVPILLAALTQLT***
Disordered Region (DISEMBL)
********NTGTAEVLKVIKS**********LKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER
Disordered Region (DISPRO)
************AEVLKVIKSS**************LDLHALPTRQYLDQTVVPILLAALTQLT***
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPIEDNTNNTGTAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
Q99LT0	99	Protein dpy-30 homolog OS	yes	N/A	0.507	0.343	0.676	1e-05
Q8K3E7	99	Protein dpy-30 homolog OS	yes	N/A	0.507	0.343	0.676	1e-05
Q9C005	99	Protein dpy-30 homolog OS	yes	N/A	0.507	0.343	0.676	1e-05
Q2NKU6	99	Protein dpy-30 homolog OS	yes	N/A	0.507	0.343	0.676	1e-05

>sp|Q99LT0|DPY30_MOUSE Protein dpy-30 homolog OS=Mus musculus GN=Dpy30 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. May also play an indirect or direct role in endosomal transport.
Mus musculus (taxid: 10090)

>sp|Q8K3E7|DPY30_RAT Protein dpy-30 homolog OS=Rattus norvegicus GN=Dpy30 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. May also play an indirect or direct role in endosomal transport.

Rattus norvegicus (taxid: 10116)

>sp|Q9C005|DPY30_HUMAN Protein dpy-30 homolog OS=Homo sapiens GN=DPY30 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. May also play an indirect or direct role in endosomal transport.

Homo sapiens (taxid: 9606)

>sp|Q2NKU6|DPY30_BOVIN Protein dpy-30 homolog OS=Bos taurus GN=DPY30 PE=3 SV=1

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct: 43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. May also play an indirect or direct role in endosomal transport.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
357625716	110	dpy-30-like protein [Danaus plexippus]	0.805	0.490	0.589	1e-07
332021244	111	Protein dpy-30-like protein [Acromyrmex	0.761	0.459	0.607	3e-07
242013635	112	histone H1-I-1, putative [Pediculus huma	0.940	0.562	0.530	3e-07
307166756	139	Protein dpy-30-like protein [Camponotus	0.641	0.309	0.644	9e-07
427786051	113	hypothetical protein [Rhipicephalus pulc	0.716	0.424	0.607	1e-06
322784286	107	hypothetical protein SINV_06876 [Solenop	0.522	0.327	0.742	2e-06
307206810	110	Protein dpy-30-like protein [Harpegnatho	0.910	0.554	0.516	3e-06
442752815	118	Putative protein dpy-30 [Ixodes ricinus]	0.716	0.406	0.588	3e-06
442761477	127	Putative protein dpy-30, partial [Ixodes	0.716	0.377	0.588	3e-06
340712880	112	PREDICTED: protein dpy-30 homolog [Bombu	0.522	0.312	0.742	4e-06

>gi|357625716|gb|EHJ76066.1| dpy-30-like protein [Danaus plexippus]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 39/56 (69%), Gaps = 2/56 (3%)

Query: 12 TAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          T  V K+I  S  KE +    +K R+DL+ALPTRQYLDQTVVPILL  L+ L KER
Sbjct: 21 TESVKKII--SMEKENETNANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKER 74

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021244|gb|EGI61629.1| Protein dpy-30-like protein [Acromyrmex echinatior]

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 36/51 (70%)

Query: 17 KVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          KVI      E  G   KKPR+++ +LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 32 KVIGMDKDGELSGVPAKKPRVEVQSLPTRQYLDQTVVPILLQALSCLAKER 82

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242013635|ref|XP_002427508.1| histone H1-I-1, putative [Pediculus humanus corporis] gi|212511903|gb|EEB14770.1| histone H1-I-1, putative [Pediculus humanus corporis]

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/66 (53%), Positives = 44/66 (66%), Gaps = 3/66 (4%)

Query: 5  DNTNNTGTAEVLKVIKSS--DSKEGDG-PGLKKPRLDLHALPTRQYLDQTVVPILLAALT 61
          D TN   + E L VI +   +++ GD     KK R+DL +LP RQYLDQTVVPILL AL+
Sbjct: 16 DTTNPPVSEETLNVINAEKEETEIGDSNASSKKTRVDLQSLPIRQYLDQTVVPILLQALS 75

Query: 62 QLTKER 67
           L+KER
Sbjct: 76 TLSKER 81

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166756|gb|EFN60718.1| Protein dpy-30-like protein [Camponotus floridanus]

 Score = 57.8 bits (138), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 36/45 (80%), Gaps = 2/45 (4%)

Query: 25  KEGDGPGL--KKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
           K+GD  G+  KK R+++ +LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 66  KDGDMSGVPAKKSRVEVQSLPTRQYLDQTVVPILLQALSCLAKER 110

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427786051|gb|JAA58477.1| hypothetical protein [Rhipicephalus pulchellus]

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 37/51 (72%), Gaps = 3/51 (5%)

Query: 20 KSSDSKEGDGPGL-KKPRLD--LHALPTRQYLDQTVVPILLAALTQLTKER 67
          ++S  KE  G  L KK ++D   H+LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 33 QASADKENIGASLPKKSKMDTDFHSLPTRQYLDQTVVPILLQALSTLAKER 83

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322784286|gb|EFZ11291.1| hypothetical protein SINV_06876 [Solenopsis invicta]

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 31/35 (88%)

Query: 33 KKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          KKPR+++ +LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 44 KKPRVEVQSLPTRQYLDQTVVPILLQALSCLAKER 78

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206810|gb|EFN84708.1| Protein dpy-30-like protein [Harpegnathos saltator]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 6  NTNNTGTAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTK 65
          N  +  T +V+ + K  D   G  P  KK R+++ +LPTRQYLDQTVVPILL AL+ L K
Sbjct: 21 NVVSEATHKVVGMDKDPDIS-GIPPAPKKARVEVQSLPTRQYLDQTVVPILLQALSCLAK 79

Query: 66 ER 67
          ER
Sbjct: 80 ER 81

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442752815|gb|JAA68567.1| Putative protein dpy-30 [Ixodes ricinus]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 20 KSSDSKEGDGPGL-KKPRLD--LHALPTRQYLDQTVVPILLAALTQLTKER 67
          K++  KE     L KK ++D   H+LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 38 KATSDKENIAASLPKKSKMDSDFHSLPTRQYLDQTVVPILLQALSTLAKER 88

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442761477|gb|JAA72897.1| Putative protein dpy-30, partial [Ixodes ricinus]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)

Query: 20 KSSDSKEGDGPGL-KKPRLD--LHALPTRQYLDQTVVPILLAALTQLTKER 67
          K++  KE     L KK ++D   H+LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 47 KATSDKENIAASLPKKSKMDSDFHSLPTRQYLDQTVVPILLQALSTLAKER 97

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712880|ref|XP_003394981.1| PREDICTED: protein dpy-30 homolog [Bombus terrestris] gi|350419561|ref|XP_003492226.1| PREDICTED: protein dpy-30 homolog [Bombus impatiens]

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 30/35 (85%)

Query: 33 KKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          KK R++L +LPTRQYLDQTVVPILL AL+ L KER
Sbjct: 49 KKSRVELQSLPTRQYLDQTVVPILLQALSSLAKER 83

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
UNIPROTKB|E1C6C4	99	DPY30 "Uncharacterized protein	0.507	0.343	0.676	1e-06
UNIPROTKB|Q2NKU6	99	DPY30 "Protein dpy-30 homolog"	0.507	0.343	0.676	1e-06
UNIPROTKB|B4DIS3	120	DPY30 "cDNA FLJ58897, moderate	0.507	0.283	0.676	1e-06
UNIPROTKB|Q9C005	99	DPY30 "Protein dpy-30 homolog"	0.507	0.343	0.676	1e-06
UNIPROTKB|F2Z5F7	99	DPY30 "Uncharacterized protein	0.507	0.343	0.676	1e-06
MGI|MGI:1913560	99	Dpy30 "dpy-30 homolog (C. eleg	0.507	0.343	0.676	1e-06
RGD|708575	99	Dpy30 "dpy-30 homolog (C. eleg	0.507	0.343	0.676	1e-06
FB|FBgn0035491	98	Dpy-30L2 "Dpy-30-like 2" [Dros	0.970	0.663	0.397	3.4e-06
FB|FBgn0032293	134	Dpy-30L1 "Dpy-30-like 1" [Dros	0.522	0.261	0.542	1.5e-05
WB|WBGene00001088	123	dpy-30 [Caenorhabditis elegans	0.865	0.471	0.437	3e-05

UNIPROTKB|E1C6C4 DPY30 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0016197 "endosomal transport" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0048188 "Set1C/COMPASS complex" evidence=IEA

GO:0051568 "histone H3-K4 methylation" evidence=IEA

UNIPROTKB|Q2NKU6 DPY30 "Protein dpy-30 homolog" [Bos taurus (taxid:9913)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0048188 "Set1C/COMPASS complex" evidence=ISS

GO:0035097 "histone methyltransferase complex" evidence=ISS

GO:0005802 "trans-Golgi network" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0051568 "histone H3-K4 methylation" evidence=ISS

GO:0016197 "endosomal transport" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

UNIPROTKB|B4DIS3 DPY30 "cDNA FLJ58897, moderately similar to Dpy-30-like protein" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q9C005 DPY30 "Protein dpy-30 homolog" [Homo sapiens (taxid:9606)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016197 "endosomal transport" evidence=IMP

GO:0048188 "Set1C/COMPASS complex" evidence=IDA

GO:0035097 "histone methyltransferase complex" evidence=IDA

GO:0051568 "histone H3-K4 methylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0042802 "identical protein binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F2Z5F7 DPY30 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0051568 "histone H3-K4 methylation" evidence=IEA

GO:0048188 "Set1C/COMPASS complex" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0016197 "endosomal transport" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

MGI|MGI:1913560 Dpy30 "dpy-30 homolog (C. elegans)" [Mus musculus (taxid:10090)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0005634 "nucleus" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016197 "endosomal transport" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0035097 "histone methyltransferase complex" evidence=ISO

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=ISO

GO:0048188 "Set1C/COMPASS complex" evidence=ISO

GO:0051568 "histone H3-K4 methylation" evidence=ISO

RGD|708575 Dpy30 "dpy-30 homolog (C. elegans)" [Rattus norvegicus (taxid:10116)]

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query:    34 KPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             K ++DL +LPTR YLDQTVVPILL  L  L KER
Sbjct:    43 KQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKER 76

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA;ISO;ISS

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0016197 "endosomal transport" evidence=IEA;ISO;ISS

GO:0035097 "histone methyltransferase complex" evidence=ISO;ISS

GO:0042802 "identical protein binding" evidence=ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0048188 "Set1C/COMPASS complex" evidence=IEA;ISO;ISS

GO:0051568 "histone H3-K4 methylation" evidence=IEA;ISO;ISS

GO:0005730 "nucleolus" evidence=ISO

FB|FBgn0035491 Dpy-30L2 "Dpy-30-like 2" [Drosophila melanogaster (taxid:7227)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 29/73 (39%), Positives = 39/73 (53%)

Query:     1 MPIEDNTNNT-GTAEVLKVIKSSDSKEG-DG----PGLKKPRLDLHALPTRQYLDQTVVP 54
             MP+        G  +V K    S+S++  DG       +KPR D  ++P RQYLDQTV P
Sbjct:     1 MPVSPGEGEVNGGGDVAK--NDSNSQQSVDGIDAFAACQKPRPDTSSMPVRQYLDQTVAP 58

Query:    55 ILLAALTQLTKER 67
             ILL  L  L ++R
Sbjct:    59 ILLHGLQALARDR 71

GO:0030317 "sperm motility" evidence=IMP

FB|FBgn0032293 Dpy-30L1 "Dpy-30-like 1" [Drosophila melanogaster (taxid:7227)]

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)

Query:    33 KKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
             KKP  + + +PTRQYLDQTV P+LL  +  L +ER
Sbjct:    67 KKPSSETNNMPTRQYLDQTVAPVLLHGMQALARER 101

GO:0048188 "Set1C/COMPASS complex" evidence=IDA

GO:0046331 "lateral inhibition" evidence=IMP

GO:0051568 "histone H3-K4 methylation" evidence=IDA

GO:0044665 "MLL1/2 complex" evidence=ISS

GO:0044666 "MLL3/4 complex" evidence=IDA

WB|WBGene00001088 dpy-30 [Caenorhabditis elegans (taxid:6239)]

 Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query:     4 EDNTNNTGTAEVLKVIKSSDSKEGDGPGLKKPRLDLHALPTRQYLDQTVVPILLAALTQL 63
             E N N T  + VL    S++  +  G     PR +   +PTRQYLD TVVPILL  L  L
Sbjct:    36 ESNENTTVPSNVL----SANGGQQTG-NQSAPR-NTSTVPTRQYLDSTVVPILLQGLGAL 89

Query:    64 TKER 67
              K+R
Sbjct:    90 AKDR 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.131   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  11 23  0.37    29
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  398 (42 KB)
  Total size of DFA:  69 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.04u 0.12s 8.16t   Elapsed:  00:00:02
  Total cpu time:  8.04u 0.12s 8.16t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:49:04 2013   End:  Thu Aug 15 16:49:06 2013

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040017 "positive regulation of locomotion" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040027 "negative regulation of vulval development" evidence=IMP

GO:0042464 "dosage compensation by hypoactivation of X chromosome" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040014 "regulation of multicellular organism growth" evidence=IMP

GO:0045138 "tail tip morphogenesis" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2NKU6	DPY30_BOVIN	No assigned EC number	0.6764	0.5074	0.3434	yes	N/A
Q99LT0	DPY30_MOUSE	No assigned EC number	0.6764	0.5074	0.3434	yes	N/A
Q9C005	DPY30_HUMAN	No assigned EC number	0.6764	0.5074	0.3434	yes	N/A
Q8K3E7	DPY30_RAT	No assigned EC number	0.6764	0.5074	0.3434	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	67
pfam05186	42	pfam05186, Dpy-30, Dpy-30 motif	6e-06

>gnl|CDD|147395 pfam05186, Dpy-30, Dpy-30 motif

 Score = 38.3 bits (90), Expect = 6e-06
 Identities = 17/25 (68%), Positives = 19/25 (76%)

Query: 43 PTRQYLDQTVVPILLAALTQLTKER 67
          P RQYL+ TV PILL  LT+L KER
Sbjct: 1  PARQYLNDTVAPILLQGLTELAKER 25

This motif is found in a wide variety of domain contexts. It is found in the Dpy-30 proteins hence the motifs name. It is about 40 residues long and is probably fomed of two alpha-helices. It may be a dimerisation motif analogous to pfam02197 (Bateman A pers obs). Length = 42

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
KOG4109|consensus	116		99.52
PF05186	42	Dpy-30: Dpy-30 motif; InterPro: IPR007858 This mot	98.68

>KOG4109|consensus

Probab=99.52  E-value=5.1e-15  Score=100.68  Aligned_cols=38  Identities=55%  Similarity=0.919  Sum_probs=35.7

Q ss_pred             CCCCCCCCCCCCchhHHHHhhhHHHHHHHHHHHHhhcC
Q psy4075          30 PGLKKPRLDLHALPTRQYLDQTVVPILLAALTQLTKER   67 (67)
Q Consensus        30 ~~~~~~~~~l~sLP~RqYLdqTVVPiLLqGL~~LaKER   67 (67)
                      +..++++.+++++|+|||||+||+||||+||.+|||+|
T Consensus        52 a~~~k~k~~v~~~ptRqYLdqtVaPiLL~Gm~~lA~~r   89 (116)
T KOG4109|consen   52 ANQQKPKEDVNSMPTRQYLDQTVAPILLQGMAALAKER   89 (116)
T ss_pred             hhhcCccccccCCchhhhcccchhHHHHHHHHHHHhhC
Confidence            44579999999999999999999999999999999998

>PF05186 Dpy-30: Dpy-30 motif; InterPro: IPR007858 This motif is about 40 residues long and is probably formed of two alpha-helices

Probab=98.68  E-value=1.7e-08  Score=57.37  Aligned_cols=25  Identities=56%  Similarity=0.913  Sum_probs=22.6

Q ss_pred             hhHHHHhhhHHHHHHHHHHHHhhcC
Q psy4075          43 PTRQYLDQTVVPILLAALTQLTKER   67 (67)
Q Consensus        43 P~RqYLdqTVVPiLLqGL~~LaKER   67 (67)
                      |.|+||+++|+|+|.+||.+++|+|
T Consensus         1 p~r~YL~~~v~p~L~~gL~~l~~~r   25 (42)
T PF05186_consen    1 PARQYLKETVGPVLTEGLAELAKER   25 (42)
T ss_dssp             -HHHHHHHHTHHHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHhHHHHHHHHHHHHHHC
Confidence            7899999999999999999999997

It is found in the Dpy-30 proteins, hence the motifs name. Dpy-30 from Caenorhabditis elegans is an essential component of dosage compensation machinery and loss of dpy-30 activity results in XX-specific lethality; in XO animals, Dpy-30 is required for developmental processes other than dosage compensation []. In yeast, the homologue of DPY-30, Saf19p, functions as part of the Set1 complex that is necessary for the methylation of histone H3 at lysine residue 4; Set1 is a key part of epigenetic developmental control []. There is also a human homologue of Dpy-30 []. This Dpy-30 region may be a dimerisation motif analogous that found in the cAMP-dependent protein kinase regulator, type II PKA, R subunit IPR003117 from INTERPRO.; PDB: 3G36_D.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	67
3g36_A	55	Crystal Structure Of The Human Dpy-30-Like C-Termin		1e-05

>pdb|3G36|A Chain A, Crystal Structure Of The Human Dpy-30-Like C-Terminal Domain Length = 55

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 36 RLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          ++DL +LPTR YLDQTVVPILL     L KER
Sbjct: 1  KVDLQSLPTRAYLDQTVVPILLQGXAVLAKER 32

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	67
3g36_A	55	Protein DPY-30 homolog; X-type four-helix bundle,	2e-10

>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens} Length = 55

 Score = 49.3 bits (118), Expect = 2e-10
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 36 RLDLHALPTRQYLDQTVVPILLAALTQLTKER 67
          ++DL +LPTR YLDQTVVPILL  +  L KER
Sbjct: 1  KVDLQSLPTRAYLDQTVVPILLQGMAVLAKER 32

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
3g36_A	55	Protein DPY-30 homolog; X-type four-helix bundle,	99.37

>3g36_A Protein DPY-30 homolog; X-type four-helix bundle, nucleus, nuclear protein; 1.20A {Homo sapiens}

Probab=99.37  E-value=2.2e-13  Score=80.72  Aligned_cols=32  Identities=66%  Similarity=1.046  Sum_probs=30.2

Q ss_pred             CCCCCCchhHHHHhhhHHHHHHHHHHHHhhcC
Q psy4075          36 RLDLHALPTRQYLDQTVVPILLAALTQLTKER   67 (67)
Q Consensus        36 ~~~l~sLP~RqYLdqTVVPiLLqGL~~LaKER   67 (67)
                      +++++|||+|+||+++|+|+|++||.+|||+|
T Consensus         1 ~~~~~slp~R~YL~~~V~p~L~~GL~~lak~r   32 (55)
T 3g36_A            1 KVDLQSLPTRAYLDQTVVPILLQGMAVLAKER   32 (55)
T ss_dssp             -CCGGGSCHHHHHHTTTHHHHHHHHHHHHHHC
T ss_pred             CcccccCcHHHHHHHHhHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999998

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00