Psyllid ID: psy4089

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQLY
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHccHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccHHHcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccEcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
minkdfeeypehRTNFFLLLQAVNlhcfpafllipqpqfKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTdtshsaslAHHAQILSYMFKLVEtrevaaplapgvtdnVVYVQEFVARTLKSafphltenQIKVTVQGMfdfnndlpaFKEHLRDFLVQIReftgeddsdLFLDEIEQTLKQAQEKKRQTQLY
Flexible Loop (DISEMBL)
minkdfeeyPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAqekkrqtqly
Low Complexity Region (SEG)
MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQLY
Disordered region (IsUnstruct)
***********HRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFL********************
Disordered Region (DISOPRED)
MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLD*******************
Disordered Region (DISEMBL)
********YPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLK************
Disordered Region (DISPRO)
*INKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKK******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFxxxxxxxxxxxxxxxxxxxxx
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	223	2.2.26 [Sep-21-2011]
Q6P5F9	1071	Exportin-1 OS=Mus musculu	yes	N/A	0.991	0.206	0.686	2e-85
Q80U96	1071	Exportin-1 OS=Rattus norv	yes	N/A	0.991	0.206	0.686	3e-85
O14980	1071	Exportin-1 OS=Homo sapien	yes	N/A	0.991	0.206	0.681	9e-84
Q9TVM2	1063	Exportin-1 OS=Drosophila	yes	N/A	0.982	0.206	0.610	1e-71
P14068	1078	Exportin-1 OS=Schizosacch	yes	N/A	0.968	0.200	0.430	5e-48
P30822	1084	Exportin-1 OS=Saccharomyc	yes	N/A	0.982	0.202	0.386	8e-37
Q54EV7	1057	Exportin-1 OS=Dictyosteli	yes	N/A	0.964	0.203	0.373	1e-35

>sp|Q6P5F9|XPO1_MOUSE Exportin-1 OS=Mus musculus GN=Xpo1 PE=1 SV=1

 Score =  314 bits (805), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 153/223 (68%), Positives = 180/223 (80%), Gaps = 2/223 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 833  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 893  GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query: 121  LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++ PL PG   +N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 952  LVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct: 1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of an nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Involved in U3 snoRNA transport from Cajal bodies to nucleoli. Binds to late precursor U3 snoRNA bearing a TMG cap.
Mus musculus (taxid: 10090)

>sp|Q80U96|XPO1_RAT Exportin-1 OS=Rattus norvegicus GN=Xpo1 PE=2 SV=1

 Score =  314 bits (804), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/223 (68%), Positives = 179/223 (80%), Gaps = 2/223 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 833  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 893  GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query: 121  LVETREVAAPLAPGV-TDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++ PL PG    N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 952  LVEEGKISTPLNPGSPVSNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct: 1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of an nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Involved in U3 snoRNA transport from Cajal bodies to nucleoli. Binds to late precursor U3 snoRNA bearing a TMG cap.

Rattus norvegicus (taxid: 10116)

>sp|O14980|XPO1_HUMAN Exportin-1 OS=Homo sapiens GN=XPO1 PE=1 SV=1

 Score =  309 bits (792), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 152/223 (68%), Positives = 178/223 (79%), Gaps = 2/223 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 833  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 892

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 893  GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query: 121  LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++  L PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 952  LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QA E+K + Q+
Sbjct: 1012 KEHLRDFLVQIKEFAGEDTSDLFLEEREIALRQADEEKHKRQM 1054

Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase RAN in its active GTP-bound form (Ran-GTP). Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of an nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Involved in U3 snoRNA transport from Cajal bodies to nucleoli. Binds to late precursor U3 snoRNA bearing a TMG cap. Several viruses, among them HIV-1, HTLV-1 and influenza A use it to export their unspliced or incompletely spliced RNAs out of the nucleus. Interacts with, and mediates the nuclear export of HIV-1 Rev and HTLV-1 Rex proteins. Involved in HTLV-1 Rex multimerization.

Homo sapiens (taxid: 9606)

>sp|Q9TVM2|XPO1_DROME Exportin-1 OS=Drosophila melanogaster GN=emb PE=1 SV=1

 Score =  269 bits (687), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 135/221 (61%), Positives = 171/221 (77%), Gaps = 2/221 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINK+FE++P+HR +F+ LLQAVN HCF AFL IP  QFKLV DS++WAFKHTMRNVAD 
Sbjct: 826  MINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVFDSVVWAFKHTMRNVADM 885

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL ++L N+      AAQSFY TYFT+IL  +FSVVTDTSH+A L +HA IL+YMF 
Sbjct: 886  GLNILFKMLQNL-DQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFS 944

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE R++   L P + DN++++QE+VA  LKSAF HL++NQ+KV V G+F+ + ++ AFK
Sbjct: 945  LVENRKITVNLGP-IPDNMIFIQEYVASLLKSAFTHLSDNQVKVFVTGLFNLDENVQAFK 1003

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQ 221
            EHLRDFL+QIRE TGEDDSDL+L+E E  L + Q  K Q Q
Sbjct: 1004 EHLRDFLIQIREATGEDDSDLYLEEREAALAEEQSNKHQMQ 1044

Receptor for the leucine-rich nuclear export signal (NES). Binds cooperatively to the NES on its target protein and to the small GTPase Ran in its active GTP-bound form. Required for the function or maintenance of certain tissues such as brain and gut. Involved in the export of dl from the nucleus to the cytoplasm.

Drosophila melanogaster (taxid: 7227)

>sp|P14068|XPO1_SCHPO Exportin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=xpo1 PE=1 SV=3

 Score =  191 bits (484), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 146/223 (65%), Gaps = 7/223 (3%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MI+KDF EYPEHR  FF LL+A+NL+CFPA L IP PQFKLV++SI+W+FKH  R++ +T
Sbjct: 834  MISKDFSEYPEHRAAFFQLLRAINLNCFPALLNIPAPQFKLVINSIVWSFKHVSRDIQET 893

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL +L+ N+       + +F+ TY+  +L  +  V+TD+ H +     + IL+ +F 
Sbjct: 894  GLNILLELINNMASMGPDVSNAFFQTYYISLLQDILYVLTDSDHKSGFKLQSLILARLFY 953

Query: 121  LVETREVAAPLA-----PGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNND 175
            LVE+ ++  PL      P   +N +++++++   L +AFPHL   QI+  VQ +   N D
Sbjct: 954  LVESNQITVPLYDPSQFPQEMNNQLFLRQYIMNLLVTAFPHLQPIQIQEFVQTVLALNQD 1013

Query: 176  LPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKR 218
               FK  LRDFL+Q++EF G D+++L+L+E EQ L  AQ+K +
Sbjct: 1014 SIKFKLALRDFLIQLKEFGG-DNAELYLEEKEQELA-AQQKAQ 1054

Receptor for the leucine-rich nuclear export signal (NES).

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P30822|XPO1_YEAST Exportin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CRM1 PE=1 SV=1

 Score =  153 bits (387), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 6/225 (2%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 844  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 903

Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 904  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 963

Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 964  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYK 1023

Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQ 219
            DL  FK  LRDFLVQI+E  G+    LF ++ E  L +    +R+
Sbjct: 1024 DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLERE 1068

Receptor for the leucine-rich nuclear export signal (NES).

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q54EV7|XPO1_DICDI Exportin-1 OS=Dictyostelium discoideum GN=xpo1 PE=3 SV=2

 Score =  149 bits (376), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 135/230 (58%), Gaps = 15/230 (6%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MI K+FE+YP HR NFF L++A+N + F  F  +   QFKL++D ++WAFKHT RN+++T
Sbjct: 819  MITKNFEDYPYHRINFFNLIRAINSNAFTVFHNLHPQQFKLLIDCVVWAFKHTERNISET 878

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL +L+ NV  ++   A  F+ TY   +L  +  ++TD+ H +  A    IL  MF+
Sbjct: 879  GLHILKELIENVSKNS-DVANVFFKTYLVSLLNDILYILTDSFHKSGFALECDILRMMFQ 937

Query: 121  LVETREVAAPL----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDF---- 172
            +VE   V  PL          N  YV+E V  T  SA P+++  QI+  V  +F+     
Sbjct: 938  VVENGVVKIPLFDPQQANFPSNSEYVKEIVV-TFLSASPNVSRPQIQAFVTRLFNLANIN 996

Query: 173  NNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            NND   FK   RDFL+ ++E+   +++DL+ D  E+ +++A   K+Q+ +
Sbjct: 997  NND---FKSATRDFLITLKEWKSHENADLYSD--EKNIEKALALKKQSMI 1041

Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES).

Dictyostelium discoideum (taxid: 44689)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
332024051	1093	Exportin-1 [Acromyrmex echinatior]	0.986	0.201	0.720	3e-89
307195822	708	Exportin-1 [Harpegnathos saltator]	0.986	0.310	0.716	5e-89
383859079	1050	PREDICTED: exportin-1-like [Megachile ro	0.982	0.208	0.711	4e-88
307183266	354	Exportin-1 [Camponotus floridanus]	0.986	0.621	0.707	6e-88
156543308	1060	PREDICTED: exportin-1-like [Nasonia vitr	0.986	0.207	0.711	1e-87
242014222	935	Exportin, putative [Pediculus humanus co	0.991	0.236	0.707	7e-87
350413068	1062	PREDICTED: exportin-1-like [Bombus impat	0.986	0.207	0.711	2e-86
340709138	1062	PREDICTED: exportin-1-like [Bombus terre	0.986	0.207	0.707	4e-86
48120807	1062	PREDICTED: exportin-1 [Apis mellifera]	0.986	0.207	0.702	8e-86
380027108	895	PREDICTED: exportin-1-like [Apis florea]	0.986	0.245	0.702	1e-85

>gi|332024051|gb|EGI64269.1| Exportin-1 [Acromyrmex echinatior]

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 160/222 (72%), Positives = 186/222 (83%), Gaps = 2/222 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLLQAVN+HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 857  MINKDFEEFPEHRTNFFLLLQAVNIHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADT 916

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL+QLL+N+    Q A QSFY TYFT+IL HVFSVVTDTSH+A L  HA IL YMF 
Sbjct: 917  GLQILYQLLLNIEQHEQ-AGQSFYQTYFTDILQHVFSVVTDTSHTAGLTMHATILGYMFT 975

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            L+E  ++  PL P V DN +Y+QEFVAR LK+AFPHLT+NQIK+TVQG+F  N D+ AFK
Sbjct: 976  LIERGKIQVPLGP-VPDNTLYIQEFVARLLKAAFPHLTDNQIKITVQGLFHLNQDINAFK 1034

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLVQI+E+TGEDDS+L+L+E E  L+ AQE+KR+ Q+
Sbjct: 1035 EHLRDFLVQIKEYTGEDDSELYLEERETALRLAQEEKRRQQM 1076

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307195822|gb|EFN77629.1| Exportin-1 [Harpegnathos saltator]

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 159/222 (71%), Positives = 187/222 (84%), Gaps = 2/222 (0%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEE+PEHRTNFFLLLQAVN+HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 472 MINKDFEEFPEHRTNFFLLLQAVNVHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADT 531

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL+QLL+N+    Q A QSFY TYFT+IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 532 GLQILYQLLLNIEQHEQ-AGQSFYQTYFTDILQHIFSVVTDTSHTAGLTMHATILAYMFT 590

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
           L+E  ++  PL P V DN +Y+QEFVAR L++AFPHLT+NQIK+TVQG+F  N D+ AFK
Sbjct: 591 LIERGKIQVPLGP-VPDNALYIQEFVARLLRAAFPHLTDNQIKITVQGLFHLNQDITAFK 649

Query: 181 EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
           EHLRDFLVQIRE+TGEDDS+L+L+E E  L+ AQE+KR+ Q+
Sbjct: 650 EHLRDFLVQIREYTGEDDSELYLEERETALRLAQEEKRRQQM 691

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859079|ref|XP_003705025.1| PREDICTED: exportin-1-like [Megachile rotundata]

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 158/222 (71%), Positives = 188/222 (84%), Gaps = 3/222 (1%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLLQAVN++CFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 815  MINKDFEEFPEHRTNFFLLLQAVNVYCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADT 874

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL+IL+QLL N+  + + AAQSFY TYFT+IL H+FSVVTD+SH A L  HA IL+YMF 
Sbjct: 875  GLLILYQLLQNI--ENEEAAQSFYQTYFTDILQHIFSVVTDSSHIAGLNMHATILAYMFS 932

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ + ++PAFK
Sbjct: 933  LVELGRIHVPLGP-VPDNTLYVQEFVARLLKAAFPHLTDNQIKITVQGLFNLDQNIPAFK 991

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLVQIRE+TGEDDSDL+L+E E  L+ AQE+K + ++
Sbjct: 992  EHLRDFLVQIREYTGEDDSDLYLEERETALRLAQEEKWRQKM 1033

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307183266|gb|EFN70135.1| Exportin-1 [Camponotus floridanus]

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 157/222 (70%), Positives = 187/222 (84%), Gaps = 2/222 (0%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEE+PEHRTNFFLLLQAVN+HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 118 MINKDFEEFPEHRTNFFLLLQAVNVHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADT 177

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL+QLL+N+    Q A QSFY TYFT+IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 178 GLQILYQLLLNIEQHEQ-AGQSFYQTYFTDILQHIFSVVTDTSHTAGLTMHATILAYMFT 236

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
           L+E  ++  PL P V DN +Y+QEFVAR L++AFPHLT+NQIK+TVQG+F  N D+ AFK
Sbjct: 237 LIERGKIQVPLGP-VPDNTLYIQEFVARLLRAAFPHLTDNQIKITVQGLFHLNQDITAFK 295

Query: 181 EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
           EHLRDFLVQI+E+TGEDD++L+L+E E  L+ AQE+KR+ Q+
Sbjct: 296 EHLRDFLVQIKEYTGEDDAELYLEERETALRLAQEEKRRQQM 337

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156543308|ref|XP_001604619.1| PREDICTED: exportin-1-like [Nasonia vitripennis]

 Score =  328 bits (840), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 158/222 (71%), Positives = 184/222 (82%), Gaps = 2/222 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLL AVN+HCFPA L I   QFKLVLDS+IWAFKHTMRNVADT
Sbjct: 824  MINKDFEEFPEHRTNFFLLLHAVNVHCFPACLSIQPVQFKLVLDSVIWAFKHTMRNVADT 883

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL+QL  N+    + AAQSFY TYFT+IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 884  GLQILYQLFRNM-EKHEDAAQSFYQTYFTDILQHIFSVVTDTSHTAGLTMHATILAYMFT 942

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ + D+PAFK
Sbjct: 943  LVELGRIKVPLGP-VPDNTLYVQEFVARLLKAAFPHLTDNQIKITVQGLFNLDQDIPAFK 1001

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLVQIRE+TGEDDSDL+L+E E  L+ AQE+KR+ Q+
Sbjct: 1002 EHLRDFLVQIREYTGEDDSDLYLEERESALRMAQEEKRRQQM 1043

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242014222|ref|XP_002427790.1| Exportin, putative [Pediculus humanus corporis] gi|212512259|gb|EEB15052.1| Exportin, putative [Pediculus humanus corporis]

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 157/222 (70%), Positives = 186/222 (83%), Gaps = 1/222 (0%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHRTNFFLLL+AVN HCFPA L IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 695 MINKDFEEYPEHRTNFFLLLEAVNTHCFPALLNIPPAQFKLVLDSIIWAFKHTMRNVADT 754

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL ILH+LL NV    Q++ QSFY TYFT+IL H+FSVVTD+SH+  L  HA+ILSYMF+
Sbjct: 755 GLEILHRLLQNVEQHEQTS-QSFYQTYFTDILQHIFSVVTDSSHTPGLTLHAKILSYMFR 813

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
           LVE  ++  PLAP VTDNV +VQ+FVA  LK+AF HL++NQIK+TVQG+F+ + D  AFK
Sbjct: 814 LVECNKITVPLAPNVTDNVTHVQKFVATLLKNAFGHLSDNQIKITVQGLFNLDEDPGAFK 873

Query: 181 EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
           EHLRDFLVQIRE++GEDDSDLFL+E E  L++AQ +K++ QL
Sbjct: 874 EHLRDFLVQIREYSGEDDSDLFLEEREAILREAQREKQRKQL 915

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350413068|ref|XP_003489867.1| PREDICTED: exportin-1-like [Bombus impatiens]

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/222 (71%), Positives = 182/222 (81%), Gaps = 2/222 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLLQ VN+ CF AFL+IP  QFKLVLDSIIWAFKHTMRNVAD 
Sbjct: 826  MINKDFEEFPEHRTNFFLLLQEVNVSCFSAFLIIPPAQFKLVLDSIIWAFKHTMRNVADI 885

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL+QLL N+   A  A Q+FY TYFT+IL H+FSVVTDTSH A L  HA IL+YMF 
Sbjct: 886  GLQILYQLLQNIEISAPDA-QNFYQTYFTDILQHIFSVVTDTSHIAGLNMHATILAYMFS 944

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ N D+PAFK
Sbjct: 945  LVELGRIKVPLGP-VPDNTLYVQEFVARLLKTAFPHLTDNQIKITVQGLFNLNQDIPAFK 1003

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLV+IRE+TGEDDSDL+L+E E  L+ AQE+KR  Q+
Sbjct: 1004 EHLRDFLVEIREYTGEDDSDLYLEERETALRLAQEEKRLQQM 1045

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709138|ref|XP_003393170.1| PREDICTED: exportin-1-like [Bombus terrestris]

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 157/222 (70%), Positives = 182/222 (81%), Gaps = 2/222 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLLQ VN+ CF AFL+IP  QFKLVLDSIIWAFKHTMRNVAD 
Sbjct: 826  MINKDFEEFPEHRTNFFLLLQEVNVSCFSAFLIIPPAQFKLVLDSIIWAFKHTMRNVADI 885

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL+QLL N+   A  A Q+FY TYFT+IL H+FSVVTD+SH A L  HA IL+YMF 
Sbjct: 886  GLQILYQLLQNIEISAPDA-QNFYQTYFTDILQHIFSVVTDSSHIAGLNMHATILAYMFS 944

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ N D+PAFK
Sbjct: 945  LVELGRIKVPLGP-VPDNTLYVQEFVARLLKTAFPHLTDNQIKITVQGLFNLNQDIPAFK 1003

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLV+IRE+TGEDDSDL+L+E E  L+ AQE+KR  Q+
Sbjct: 1004 EHLRDFLVEIREYTGEDDSDLYLEERETALRLAQEEKRLQQM 1045

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48120807|ref|XP_396469.1| PREDICTED: exportin-1 [Apis mellifera]

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 156/222 (70%), Positives = 183/222 (82%), Gaps = 2/222 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEE+PEHRTNFFLLLQAVN+ CF AFL+IP  QFKLVLDSIIWAFKHTMRNVAD 
Sbjct: 826  MINKDFEEFPEHRTNFFLLLQAVNVSCFSAFLIIPPAQFKLVLDSIIWAFKHTMRNVADI 885

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL+QLL N+   +   AQ+F+ TYFT+IL H+FSVVTD+SH A L  HA IL+YMF 
Sbjct: 886  GLQILYQLLQNI-EVSTPDAQNFHQTYFTDILQHIFSVVTDSSHIAGLNMHATILAYMFS 944

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ N D+PAFK
Sbjct: 945  LVELGRIKVPLGP-VPDNTLYVQEFVARLLKTAFPHLTDNQIKITVQGLFNLNQDIPAFK 1003

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            EHLRDFLV+IRE+TGEDDSDL+L+E E  L+ AQE+KR  Q+
Sbjct: 1004 EHLRDFLVEIREYTGEDDSDLYLEERETALRLAQEEKRLQQM 1045

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027108|ref|XP_003697274.1| PREDICTED: exportin-1-like [Apis florea]

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/222 (70%), Positives = 183/222 (82%), Gaps = 2/222 (0%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEE+PEHRTNFFLLLQAVN+ CF AFL+IP  QFKLVLDSIIWAFKHTMRNVAD 
Sbjct: 659 MINKDFEEFPEHRTNFFLLLQAVNVSCFSAFLIIPPAQFKLVLDSIIWAFKHTMRNVADI 718

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL+QLL N+   +   AQ+F+ TYFT+IL H+FSVVTD+SH A L  HA IL+YMF 
Sbjct: 719 GLQILYQLLQNI-EVSTPDAQNFHQTYFTDILQHIFSVVTDSSHIAGLNMHATILAYMFS 777

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
           LVE   +  PL P V DN +YVQEFVAR LK+AFPHLT+NQIK+TVQG+F+ N D+PAFK
Sbjct: 778 LVELGRIKVPLGP-VPDNTLYVQEFVARLLKTAFPHLTDNQIKITVQGLFNLNQDIPAFK 836

Query: 181 EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
           EHLRDFLV+IRE+TGEDDSDL+L+E E  L+ AQE+KR  Q+
Sbjct: 837 EHLRDFLVEIREYTGEDDSDLYLEERETALRLAQEEKRLQQM 878

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
UNIPROTKB|F1NVE5	1071	XPO1 "Uncharacterized protein"	0.991	0.206	0.690	1.2e-79
UNIPROTKB|E1BE98	1071	XPO1 "Uncharacterized protein"	0.991	0.206	0.690	2.6e-79
UNIPROTKB|E2R9K4	1071	XPO1 "Uncharacterized protein"	0.991	0.206	0.690	2.6e-79
UNIPROTKB|I3LLS7	971	XPO1 "Uncharacterized protein"	0.991	0.227	0.690	2.6e-79
MGI|MGI:2144013	1071	Xpo1 "exportin 1, CRM1 homolog	0.991	0.206	0.686	5.4e-79
RGD|620517	1071	Xpo1 "exportin 1, CRM1 homolog	0.991	0.206	0.686	6.8e-79
UNIPROTKB|O14980	1071	XPO1 "Exportin-1" [Homo sapien	0.991	0.206	0.681	1e-77
ZFIN|ZDB-GENE-070530-6	1074	xpo1b "exportin 1 (CRM1 homolo	0.991	0.205	0.677	5.5e-77
UNIPROTKB|Q9PW90	1071	Q9PW90 "CRM1/XPO1 protein" [Xe	0.991	0.206	0.668	5e-76
FB|FBgn0020497	1063	emb "embargoed" [Drosophila me	0.982	0.206	0.610	4.6e-69

UNIPROTKB|F1NVE5 XPO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 154/223 (69%), Positives = 181/223 (81%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL+ LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILYTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTPLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

GO:0005643 "nuclear pore" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

UNIPROTKB|E1BE98 XPO1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 154/223 (69%), Positives = 180/223 (80%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTPLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

GO:0046825 "regulation of protein export from nucleus" evidence=IEA

GO:0042176 "regulation of protein catabolic process" evidence=IEA

GO:0034504 "protein localization to nucleus" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0010824 "regulation of centrosome duplication" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006611 "protein export from nucleus" evidence=IEA

GO:0005642 "annulate lamellae" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

UNIPROTKB|E2R9K4 XPO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 154/223 (69%), Positives = 180/223 (80%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTPLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0005643 "nuclear pore" evidence=IEA

UNIPROTKB|I3LLS7 XPO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 154/223 (69%), Positives = 180/223 (80%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   733 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 792

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   793 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 851

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   852 LVEEGKISTPLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 911

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:   912 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 954

GO:0046825 "regulation of protein export from nucleus" evidence=IEA

GO:0042176 "regulation of protein catabolic process" evidence=IEA

GO:0034504 "protein localization to nucleus" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0010824 "regulation of centrosome duplication" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0006611 "protein export from nucleus" evidence=IEA

GO:0005642 "annulate lamellae" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000776 "kinetochore" evidence=IEA

MGI|MGI:2144013 Xpo1 "exportin 1, CRM1 homolog (yeast)" [Mus musculus (taxid:10090)]

 Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
 Identities = 153/223 (68%), Positives = 180/223 (80%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG   +N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0000776 "kinetochore" evidence=ISO

GO:0003723 "RNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005642 "annulate lamellae" evidence=ISO

GO:0005643 "nuclear pore" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006611 "protein export from nucleus" evidence=ISO;IMP;IDA

GO:0006810 "transport" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IDA

GO:0010824 "regulation of centrosome duplication" evidence=IMP

GO:0015031 "protein transport" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030529 "ribonucleoprotein complex" evidence=ISO

GO:0034504 "protein localization to nucleus" evidence=IMP

GO:0042176 "regulation of protein catabolic process" evidence=IMP

GO:0046825 "regulation of protein export from nucleus" evidence=IMP

GO:0051028 "mRNA transport" evidence=IEA

RGD|620517 Xpo1 "exportin 1, CRM1 homolog (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
 Identities = 153/223 (68%), Positives = 179/223 (80%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPGV-TDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++ PL PG    N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTPLNPGSPVSNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1054

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IMP

GO:0000776 "kinetochore" evidence=ISO;ISS

GO:0003723 "RNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO

GO:0005642 "annulate lamellae" evidence=IEA;ISO

GO:0005643 "nuclear pore" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006611 "protein export from nucleus" evidence=ISO;IDA

GO:0008565 "protein transporter activity" evidence=IEA;ISO

GO:0010824 "regulation of centrosome duplication" evidence=IEA;ISO

GO:0015030 "Cajal body" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO

GO:0034504 "protein localization to nucleus" evidence=IEA;ISO

GO:0042176 "regulation of protein catabolic process" evidence=IEA;ISO

GO:0042493 "response to drug" evidence=IEP

GO:0046825 "regulation of protein export from nucleus" evidence=IEA;ISO

GO:0051028 "mRNA transport" evidence=IEA

UNIPROTKB|O14980 XPO1 "Exportin-1" [Homo sapiens (taxid:9606)]

 Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
 Identities = 152/223 (68%), Positives = 178/223 (79%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++  L PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct:   952 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E  L+QA E+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEFAGEDTSDLFLEEREIALRQADEEKHKRQM 1054

GO:0005643 "nuclear pore" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0051028 "mRNA transport" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0006611 "protein export from nucleus" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

GO:0010824 "regulation of centrosome duplication" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0034504 "protein localization to nucleus" evidence=IEA

GO:0042176 "regulation of protein catabolic process" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0046825 "regulation of protein export from nucleus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0015030 "Cajal body" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005642 "annulate lamellae" evidence=IDA

GO:0000776 "kinetochore" evidence=IDA

GO:0005635 "nuclear envelope" evidence=TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0030529 "ribonucleoprotein complex" evidence=IDA

GO:0000087 "M phase of mitotic cell cycle" evidence=TAS

GO:0000236 "mitotic prometaphase" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0005215 "transporter activity" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0016070 "RNA metabolic process" evidence=TAS

GO:0016071 "mRNA metabolic process" evidence=TAS

GO:0019058 "viral infectious cycle" evidence=TAS

GO:0030512 "negative regulation of transforming growth factor beta receptor signaling pathway" evidence=TAS

ZFIN|ZDB-GENE-070530-6 xpo1b "exportin 1 (CRM1 homolog, yeast) b" [Danio rerio (taxid:7955)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 151/223 (67%), Positives = 178/223 (79%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRT+FF LLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   836 MINKDFEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 895

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL+ LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   896 GLQILYTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 954

Query:   121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  +++  L P    +N V++QE+VA  LKSAFPHL + Q+KV V G+F  N D+ AF
Sbjct:   955 LVEEGKISTTLNPSNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIAAF 1014

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+EF GED SDLFL+E E +L+QAQE+K + Q+
Sbjct:  1015 KEHLRDFLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQM 1057

GO:0005643 "nuclear pore" evidence=IEA

GO:0006886 "intracellular protein transport" evidence=IEA

GO:0008565 "protein transporter activity" evidence=IEA

UNIPROTKB|Q9PW90 Q9PW90 "CRM1/XPO1 protein" [Xenopus laevis (taxid:8355)]

 Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
 Identities = 149/223 (66%), Positives = 177/223 (79%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINKDFEEYPEHRT+FFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct:   833 MINKDFEEYPEHRTHFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 892

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL+ LL NV  + ++AAQSFY TYF +IL H FSVVTDTSH+A L  HA IL+YMF 
Sbjct:   893 GLQILYTLLQNVAQE-EAAAQSFYQTYFCDILQHTFSVVTDTSHTAGLTMHASILAYMFN 951

Query:   121 LVETREVAAPL-APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LVE  ++  PL      +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+ AF
Sbjct:   952 LVEEGKINTPLNQASPLNNQLFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIAAF 1011

Query:   180 KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
             KEHLRDFLVQI+E+ GED SDLFL+E E +L+QAQE+K + Q+
Sbjct:  1012 KEHLRDFLVQIKEYAGEDTSDLFLEERESSLRQAQEEKHKLQM 1054

GO:0005515 "protein binding" evidence=IPI

FB|FBgn0020497 emb "embargoed" [Drosophila melanogaster (taxid:7227)]

 Score = 705 (253.2 bits), Expect = 4.6e-69, P = 4.6e-69
 Identities = 135/221 (61%), Positives = 171/221 (77%)

Query:     1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
             MINK+FE++P+HR +F+ LLQAVN HCF AFL IP  QFKLV DS++WAFKHTMRNVAD 
Sbjct:   826 MINKNFEDFPQHRLSFYELLQAVNAHCFKAFLNIPPAQFKLVFDSVVWAFKHTMRNVADM 885

Query:    61 GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
             GL IL ++L N+      AAQSFY TYFT+IL  +FSVVTDTSH+A L +HA IL+YMF 
Sbjct:   886 GLNILFKMLQNL-DQHPGAAQSFYQTYFTDILMQIFSVVTDTSHTAGLPNHAIILAYMFS 944

Query:   121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
             LVE R++   L P + DN++++QE+VA  LKSAF HL++NQ+KV V G+F+ + ++ AFK
Sbjct:   945 LVENRKITVNLGP-IPDNMIFIQEYVASLLKSAFTHLSDNQVKVFVTGLFNLDENVQAFK 1003

Query:   181 EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQ 221
             EHLRDFL+QIRE TGEDDSDL+L+E E  L + Q  K Q Q
Sbjct:  1004 EHLRDFLIQIREATGEDDSDLYLEEREAALAEEQSNKHQMQ 1044

GO:0005049 "nuclear export signal receptor activity" evidence=ISS;NAS

GO:0006611 "protein export from nucleus" evidence=ISS;IMP;NAS

GO:0007275 "multicellular organismal development" evidence=IDA

GO:0008565 "protein transporter activity" evidence=IDA

GO:0005643 "nuclear pore" evidence=IMP

GO:0015031 "protein transport" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0051168 "nuclear export" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0007099 "centriole replication" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9TVM2	XPO1_DROME	No assigned EC number	0.6108	0.9820	0.2060	yes	N/A
O14980	XPO1_HUMAN	No assigned EC number	0.6816	0.9910	0.2063	yes	N/A
Q80U96	XPO1_RAT	No assigned EC number	0.6860	0.9910	0.2063	yes	N/A
Q6P5F9	XPO1_MOUSE	No assigned EC number	0.6860	0.9910	0.2063	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	223
smart01102	321	smart01102, CRM1_C, CRM1 C terminal	1e-84
pfam08767	279	pfam08767, CRM1_C, CRM1 C terminal	3e-65
COG5101	1053	COG5101, CRM1, Importin beta-related nuclear trans	4e-56

>gnl|CDD|198170 smart01102, CRM1_C, CRM1 C terminal

 Score =  253 bits (649), Expect = 1e-84
 Identities = 110/197 (55%), Positives = 140/197 (71%), Gaps = 2/197 (1%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHR NFF LL+A+N HCFPAFL +P  QFKLV+DSI+WAFKHT R+VADT
Sbjct: 125 MINKDFEEYPEHRVNFFKLLRAINSHCFPAFLSLPPEQFKLVIDSIVWAFKHTDRDVADT 184

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL +LL NV       A  FY  Y+  IL  +FSV+TD+ H +       +L+ +F+
Sbjct: 185 GLNILLELLNNVSKKDSQIANEFYKQYYFSILQDIFSVLTDSDHKSGFKLQCLLLAKLFR 244

Query: 121 LVETREVAAPL--APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPA 178
           LVE   ++ PL  AP  T+N  ++QE++A  L +AFP+LT+ QIK  V G+F+ N D  A
Sbjct: 245 LVEENPISVPLYDAPPGTNNKNFLQEYLANLLSTAFPNLTQEQIKSFVVGLFELNGDDNA 304

Query: 179 FKEHLRDFLVQIREFTG 195
           FKEHLRDFL+QI+EF G
Sbjct: 305 FKEHLRDFLIQIKEFGG 321

CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES). CRM1 forms a complex with the NES containing protein and the small GTPase Ran. This region forms an alpha helical structure formed by six helical hairpin motifs that are structurally similar to the HEAT repeat, but share little sequence similarity to the HEAT repeat. Length = 321

>gnl|CDD|204057 pfam08767, CRM1_C, CRM1 C terminal

 Score =  202 bits (517), Expect = 3e-65
 Identities = 94/195 (48%), Positives = 117/195 (60%), Gaps = 40/195 (20%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHR  FF LL+A+NLHCF A L +P  QFKLV+DSI+WAFKHT R+VADT
Sbjct: 125 MINKDFEEYPEHRVEFFKLLRAINLHCFDALLNLPPEQFKLVIDSIVWAFKHTNRDVADT 184

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL +LL NV  +  + A  FY  Y+  IL  +F V+TDT                  
Sbjct: 185 GLNILLELLKNV-ENKSNVANKFYFQYYLSILQEIFEVLTDTD----------------- 226

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
                                  E++A  L +AFP+LT++QIK  V G+F  +NDL  FK
Sbjct: 227 ----------------------SEYIANLLSNAFPNLTQDQIKNFVVGLFKLSNDLKKFK 264

Query: 181 EHLRDFLVQIREFTG 195
           EHLRDFL+Q++EF G
Sbjct: 265 EHLRDFLIQLKEFGG 279

CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES). CRM1 forms a complex with the NES containing protein and the small GTPase Ran. This region forms an alpha helical structure formed by six helical hairpin motifs that are structurally similar to the HEAT repeat, but share little sequence similarity to the HEAT repeat. Length = 279

>gnl|CDD|227432 COG5101, CRM1, Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]

 Score =  191 bits (487), Expect = 4e-56
 Identities = 79/217 (36%), Positives = 126/217 (58%), Gaps = 3/217 (1%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MI KDF+EYPEHR NF LLL+ +NL  F AFL  PQP FKLV ++I+W+FKH  R+V+D 
Sbjct: 839  MIVKDFDEYPEHRKNFLLLLENINLFSFSAFLSFPQPSFKLVYNTILWSFKHINRDVSDL 898

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  L  N           FY  Y+   L ++  V+TD+ H +       +L+++ +
Sbjct: 899  GLNILLILFKNCHEMGVPFINQFYAQYYMSTLENILGVLTDSDHKSGFDQQCLLLAFLIR 958

Query: 121  LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
            LV+  +++ PL  G+  N+  + E++      +FP++T+  +K+   G+F+   D   FK
Sbjct: 959  LVKDNKISVPLYDGINPNITILSEYIVGLFVKSFPNITQESVKIFSVGLFELCGDDEIFK 1018

Query: 181  EHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKK 217
            EH+ DF V++ EF  ++D     +EI+   ++ +  K
Sbjct: 1019 EHVEDFRVKVYEFGTDEDLQ---EEIDLKNERIRRCK 1052

Length = 1053

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
PF08767	319	CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1	100.0
COG5101	1053	CRM1 Importin beta-related nuclear transport recep	100.0
KOG2020|consensus	1041		100.0

>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES)

Probab=100.00  E-value=3.4e-66  Score=470.25  Aligned_cols=195  Identities=52%  Similarity=0.912  Sum_probs=183.7

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||++||++|||||++||+||++++++||++++++||++|+++||||+||+||++|+|+++||+++.++++|+...+++++
T Consensus       125 MI~~d~~~yPe~r~~ff~LL~~i~~~~f~~l~~lp~~~f~~~idsi~wg~kh~~~~I~~~~L~~l~~ll~~~~~~~~~~~  204 (319)
T PF08767_consen  125 MINKDFEEYPEHRVNFFKLLRAINEHCFPALLQLPPEQFKLVIDSIVWGFKHTNREISETGLNILLELLNNVSKTNPEFA  204 (319)
T ss_dssp             HHSSTSSSSHHHHHHHHHHHHHHHHHHTHHHHHS-HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHH-SHHHH
T ss_pred             HHHhhhhhChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999987445899


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCCCCCcHHHHHHHHHHHHHhhCCCCCHH
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTEN  160 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~~~~n~~~v~~~l~~lL~~~Fp~l~~~  160 (223)
                      ++||++||++++++||+|+||++||+||++||.+|++||++|++|.|++|+++++++|..||++|++++|+++|||++++
T Consensus       205 ~~F~~~y~~~il~~if~vltD~~Hk~gf~~q~~iL~~Lf~~ve~~~i~~~l~~~~~~n~~~v~~~i~~~L~~~Fp~l~~~  284 (319)
T PF08767_consen  205 NQFYQQYYLDILQDIFSVLTDSDHKSGFKLQSQILSNLFRLVESGSIQVPLFDPGMSNQEFVSEYIANLLSEAFPNLSPK  284 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTT-GGGHHHHHHHHHHHHHHHHTT-SSSSSSSTTT-HHHHHHHHHHHHHHHH-TTS-HH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHcccccccccCCCCccHHHHHHHHHHHHHHhCCCCCHH
Confidence            99999999999999999999999999999999999999999999999999999778999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccC
Q psy4089         161 QIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTG  195 (223)
Q Consensus       161 qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g  195 (223)
                      ||+.||.|||+.++|+.+||+||||||||+|||+|
T Consensus       285 qi~~fv~~Lf~~~~d~~~Fk~~lrDFlI~~kef~g  319 (319)
T PF08767_consen  285 QIENFVQGLFELNNDPEKFKTHLRDFLIQLKEFSG  319 (319)
T ss_dssp             HHHHHHHHHHHTTT-HHHHHHHHHHHHHHHTSTTT
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhhhccC
Confidence            99999999999999999999999999999999988

CRM1 forms a complex with the NES containing protein and the small GTPase Ran. This region forms an alpha helical structure formed by six helical hairpin motifs that are structurally similar to the HEAT repeat, but share little sequence similarity to the HEAT repeat []. ; PDB: 3M1I_C 3GB8_A 1W9C_A 3NC1_A 3NBY_D 3NBZ_D 3NC0_A 3GJX_D.

>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion]

Probab=100.00  E-value=4.9e-61  Score=461.72  Aligned_cols=208  Identities=38%  Similarity=0.735  Sum_probs=198.0

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||+|||.||||||.+||+||++||..||+||+++|+++||+|+|+|+|+|||.+|+|+++||+|+.++++|+...++.++
T Consensus       839 mi~kdf~EypEhr~~f~~Ll~~inl~sF~afl~~p~p~Fklv~nti~wsfkhi~RDv~~~gLnill~l~kn~~~mg~~~~  918 (1053)
T COG5101         839 MIVKDFDEYPEHRKNFLLLLENINLFSFSAFLSFPQPSFKLVYNTILWSFKHINRDVSDLGLNILLILFKNCHEMGVPFI  918 (1053)
T ss_pred             HHHhhhhhChHHHHHHHHHHHHHHHHhHHHHHcCCcHHHHHHHHHHHHHHHhccchHhhhhhHHHHHHHHHHHHhCCchH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999987667899


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCCCCCcHHHHHHHHHHHHHhhCCCCCHH
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTEN  160 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~~~~n~~~v~~~l~~lL~~~Fp~l~~~  160 (223)
                      ++||++||++++++||+|+||++|||||+.||.+|+.||++|++|+|++|+||...+|..++.+|+++++.++|||++.+
T Consensus       919 n~F~~~yy~s~l~~il~vltDsDhKsgF~~Q~Llla~li~lv~dnkisVPlyd~~~~n~~~lseyi~~l~~~sfp~it~e  998 (1053)
T COG5101         919 NQFYAQYYMSTLENILGVLTDSDHKSGFDQQCLLLAFLIRLVKDNKISVPLYDGINPNITILSEYIVGLFVKSFPNITQE  998 (1053)
T ss_pred             HHHHHHHHHHHHHHHHeeeeccchhccchHHHHHHHHHHHHHhccccccccccCCCCchhhHHHHHHHHHHhhcCcccHH
Confidence            99999999999999999999999999999999999999999999999999999878899999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCCCchhcHHHHHHHHHH
Q psy4089         161 QIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQ  212 (223)
Q Consensus       161 qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d~~dL~~eEre~~~~~  212 (223)
                      ||..|..|||++|+|..-||+|+|||+|++|||||+.+    ++|++..+-+
T Consensus       999 ~v~~f~~~l~~~~~d~~ifk~~~~df~vkv~e~g~d~~----~qe~~~~~~e 1046 (1053)
T COG5101         999 SVKIFSVGLFELCGDDEIFKEHVEDFRVKVYEFGTDED----LQEEIDLKNE 1046 (1053)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHhhheeeeCCCcc----hhHHHHHHHH
Confidence            99999999999999999999999999999999988543    4565554433

>KOG2020|consensus

Probab=100.00  E-value=3.3e-41  Score=342.04  Aligned_cols=212  Identities=49%  Similarity=0.846  Sum_probs=203.4

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||++||++|||||.+|++++++++.+||+++.++|++++|+++|||+|+++|++|+|+++||+++.++++++++.+ ..+
T Consensus       819 m~~~d~qe~~e~~~~f~~lle~l~~~~~~~~~~l~~~~~~~~~~si~~~f~h~~r~i~~~~l~~l~~l~k~~~~~~-~~~  897 (1041)
T KOG2020|consen  819 MINKDFQEYPEHRLNFLLLLEALLLFCFPAFSELPADQVKLVSDSIVWAFHHTMRNIAENGLNILLELLKNLAEME-KFA  897 (1041)
T ss_pred             ccccccccchHHHHHHHHHHHHHHHhhhHHHHcCCchhhHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHhh-HHH
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999998655 689


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC-C-CCcHHHHHHHHHHHHHhhCCCCC
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG-V-TDNVVYVQEFVARTLKSAFPHLT  158 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~-~-~~n~~~v~~~l~~lL~~~Fp~l~  158 (223)
                      ++||++||.++++++++|.||++|++||+.|+..++.||++++++++..||++. + ..|.+|+++|+.++|..+||+++
T Consensus       898 ~~~~~~~~~~~l~~~~~~~~~~~~~~~f~~~~L~~~~l~~l~~~~~~~~~l~~~~~v~~n~~~L~e~i~~~l~~~f~~~~  977 (1041)
T KOG2020|consen  898 NAFYQTYFLSLLQKIIAVLTDTDHKAGFTKQVLKLQFLFRLVESAKLHTPLLQGNVVHGNQAFLREYIYGLLRPAFPNLT  977 (1041)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhcchHHHHHHHHHHHHHHhhhHHHhhccccccchHHHHHHHHHHHhhhhhchhhc
Confidence            999999999999999999999999999999999999999999999999999994 3 23888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCCCchhcHHHHHHHHHHHHH
Q psy4089         159 ENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQE  215 (223)
Q Consensus       159 ~~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d~~dL~~eEre~~~~~~~~  215 (223)
                      +.++..|+.|+|..++|.+.||.++||  +++||++|+++.++|.+|++.+..++..
T Consensus       978 ~~~v~~~~~~~~~~~~~~~~~k~~~~d--~~~~e~~~~~~~~l~~~e~~~~~~r~~~ 1032 (1041)
T KOG2020|consen  978 DEQVRAFDIGLFDECKDVSPFKDHVRD--VQIKEFGGQDTSDLFREEAEIRLLRANQ 1032 (1041)
T ss_pred             hHHHHHHhHHHHHHhcccchhhcchhh--HHHHHhcccchHHHHHHHhhHHhhhhhc
Confidence            999999999999999999999999999  9999999999999999999988777654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	223
3gjx_A	1073	Crystal Structure Of The Nuclear Export Complex Crm		2e-86
3gb8_A	1071	Crystal Structure Of Crm1SNURPORTIN-1 Complex Lengt		7e-85
1w9c_A	321	Proteolytic Fragment Of Crm1 Spanning Six C-Termina		2e-76
4fgv_A	1086	Crystal Structure Of Free Crm1 (crystal Form 1) Len		1e-38
3m1i_C	1049	Crystal Structure Of Yeast Crm1 (Xpo1p) In Complex		6e-38
4gpt_C	1060	Crystal Structure Of Kpt251 In Complex With Crm1-ra		4e-37
4hb4_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
4haz_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
4hay_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
4hb0_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
4hb3_C	1023	Crystal Structure Of Crm1(t539s)-ran-ranbp1 Soaked		5e-37
4hb2_C	1023	Crystal Structure Of Crm1-ran-ranbp1 Length = 1023		5e-37
4hat_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
4hax_C	1023	Crystal Structure Of Crm1 Inhibitor Ratjadone A In		5e-37
4haw_C	1023	Crystal Structure Of Crm1 Inhibitor Leptomycin B In		5e-37
3vyc_A	1033	Crystal Structure Of Unliganded Saccharomyces Cerev		5e-35

>pdb|3GJX|A Chain A, Crystal Structure Of The Nuclear Export Complex Crm1- Snurportin1-Rangtp Length = 1073

Iteration: 1
 Score =  315 bits (806), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 153/223 (68%), Positives = 180/223 (80%), Gaps = 2/223 (0%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 835  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 894
Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 895  GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 953
Query: 121  LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++ PL PG   +N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 954  LVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1013
Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct: 1014 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1056

>pdb|3GB8|A Chain A, Crystal Structure Of Crm1SNURPORTIN-1 Complex Length = 1071

Iteration: 1
 Score =  309 bits (792), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 152/223 (68%), Positives = 178/223 (79%), Gaps = 2/223 (0%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 833  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 892
Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 893  GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 951
Query: 121  LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++  L PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 952  LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1011
Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QA E+K + Q+
Sbjct: 1012 KEHLRDFLVQIKEFAGEDTSDLFLEEREIALRQADEEKHKRQM 1054

>pdb|1W9C|A Chain A, Proteolytic Fragment Of Crm1 Spanning Six C-Terminal Heat Repeats Length = 321

Iteration: 1
 Score =  281 bits (718), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 137/196 (69%), Positives = 158/196 (80%), Gaps = 2/196 (1%)
Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 127 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 186
Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 187 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 245
Query: 121 LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
           LVE  +++  L PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 246 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 305
Query: 180 KEHLRDFLVQIREFTG 195
           KEHLRDFLVQI+EF G
Sbjct: 306 KEHLRDFLVQIKEFAG 321

>pdb|4FGV|A Chain A, Crystal Structure Of Free Crm1 (crystal Form 1) Length = 1086

Iteration: 1
 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 129/227 (56%), Gaps = 16/227 (7%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  FF LL+A+NL+CFPA L +   QFK V+DS +WA KH  R+V   
Sbjct: 839  MINKDFAEYPEHRVEFFNLLRAINLYCFPALLKLDNRQFKFVIDSCMWASKHDNRDVETA 898
Query: 61   GLMILHQLLVNVCH--DAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYM 118
            GL +  +L+ N+    D Q+   +F+  +F  IL  VF V+TDT H A     + +L  +
Sbjct: 899  GLNMCLELINNIAEKTDVQT-CNAFFNQFFIRILQDVFFVLTDTDHKAGFKTQSMLLMRL 957
Query: 119  FKLVETREVAAP-----------LAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQ 167
            F  V   + +AP             PG T N  ++  FV   L++AF +LT  QI   V+
Sbjct: 958  FYFVHPADGSAPKIQGPIYQPDQAQPG-TGNREFLANFVGTLLQNAFANLTPLQITTFVK 1016
Query: 168  GMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQ 214
              F+ N     F+  LRDFL+ +REF G D+++L+  E EQ  ++A+
Sbjct: 1017 DCFELNTQYDKFRVVLRDFLISLREFAG-DNAELYQVEKEQQEREAR 1062

>pdb|3M1I|C Chain C, Crystal Structure Of Yeast Crm1 (Xpo1p) In Complex With Yeas (Yrb1p) And Yeast Rangtp (Gsp1pgtp) Length = 1049

Iteration: 1
 Score =  153 bits (387), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 6/225 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQ 219
            DL  FK  LRDFLVQI+E  G+    LF ++ E  L +    +R+
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLERE 1033

>pdb|4GPT|C Chain C, Crystal Structure Of Kpt251 In Complex With Crm1-ran-ranbp1 Length = 1060

Iteration: 1
 Score =  150 bits (380), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 846  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 905
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 906  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 965
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 966  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 1025
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 1026 DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1058

>pdb|4HB4|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1(537dltvk541/glceq)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (380), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HAZ|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1(r543s,k548e,k579q)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HAY|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1(k548e,k579q)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HB0|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1(k541q,k542q,r543s,k545q,k548q,k579q)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HB3|C Chain C, Crystal Structure Of Crm1(t539s)-ran-ranbp1 Soaked In Excess Crm1 Inhibitor Leptomycin B Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HB2|C Chain C, Crystal Structure Of Crm1-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HAT|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1- Ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HAX|C Chain C, Crystal Structure Of Crm1 Inhibitor Ratjadone A In Complex With Crm1(k579a)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|4HAW|C Chain C, Crystal Structure Of Crm1 Inhibitor Leptomycin B In Complex With Crm1(k548a)-ran-ranbp1 Length = 1023

Iteration: 1
 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928
Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQCK 988
Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIE 207
            DL  FK  LRDFLVQI+E  G+    LF ++ E
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKE 1021

>pdb|3VYC|A Chain A, Crystal Structure Of Unliganded Saccharomyces Cerevisiae Crm1 (Xpo1p) Length = 1033

Iteration: 1
 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 807  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 866
Query: 61   GLMILHQLLVNVCHDAQSA-AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 867  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 926
Query: 120  KLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
             LV   +         T N VY+ +++A  L +AFPHLT  QI   +  +     DL  F
Sbjct: 927  SLVYDNK---------TSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYKDLVVF 977
Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQ 219
            K  LRDFLVQI+E  G+    LF ++ E  L +    +R+
Sbjct: 978  KGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLERE 1017

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	223
1w9c_A	321	CRM1 protein, exportin 1; nuclear protein, nuclear	3e-83
3gjx_A	1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	2e-76
3m1i_C	1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	9e-73
2x19_B	963	Importin-13; nuclear transport, protein transport;	1e-27
3ibv_A	980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	2e-22
2x1g_F	971	Cadmus; transport protein, developmental protein,	5e-21
3a6p_A	1204	Exportin-5; exportin-5, RANGTP, nuclearexport, imp	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19 Length = 321

 Score =  249 bits (637), Expect = 3e-83
 Identities = 135/196 (68%), Positives = 156/196 (79%), Gaps = 2/196 (1%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 127 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 186

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL  LL NV  + ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 187 GLQILFTLLQNVAQE-EAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 245

Query: 121 LVETREVAAPL-APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
           LVE  +++  L      +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 246 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 305

Query: 180 KEHLRDFLVQIREFTG 195
           KEHLRDFLVQI+EF G
Sbjct: 306 KEHLRDFLVQIKEFAG 321

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Length = 1073

 Score =  247 bits (632), Expect = 2e-76
 Identities = 153/223 (68%), Positives = 179/223 (80%), Gaps = 2/223 (0%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 835  MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADT 894

Query: 61   GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            GL IL  LL NV    ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 895  GLQILFTLLQNV-AQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 953

Query: 121  LVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
            LVE  +++ PL PG   +N +++Q++VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 954  LVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 1013

Query: 180  KEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            KEHLRDFLVQI+EF GED SDLFL+E E  L+QAQE+K + Q+
Sbjct: 1014 KEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1056

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Length = 1049

 Score =  237 bits (605), Expect = 9e-73
 Identities = 87/228 (38%), Positives = 122/228 (53%), Gaps = 6/228 (2%)

Query: 1    MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
            MINKDF EYPEHR  F+ LL+ +N   F AFL +P   FKL +D+I WAFKH  R+V   
Sbjct: 809  MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVN 868

Query: 61   GLMILHQLLVNVC-HDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMF 119
            GL I   L+ N+        A  F+  YF   ++  F V+TD+ H +  +  A +L  + 
Sbjct: 869  GLQIALDLVKNIERMGNVPFANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLI 928

Query: 120  KLVETREVAAPL-----APGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNN 174
             LV   +++ PL      P  T N VY+ +++A  L +AFPHLT  QI   +  +     
Sbjct: 929  SLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAFPHLTSEQIASFLSALTKQYK 988

Query: 175  DLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL 222
            DL  FK  LRDFLVQI+E  G+    LF ++ E  L +    +R+   
Sbjct: 989  DLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENALMEQNRLEREKAA 1036

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Length = 963

 Score =  109 bits (272), Expect = 1e-27
 Identities = 28/205 (13%), Positives = 57/205 (27%), Gaps = 22/205 (10%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           +  +   ++P+   +F  LL        P   L  +   K V    + A K         
Sbjct: 778 LFQQGPRDHPDIVDSFMQLLAQALKRK-PDLFLCERLDVKAVFQCAVLALKFPEAPTVKA 836

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
                 +LL         +           +L  V   +   +  + +   A IL  + K
Sbjct: 837 SCGFFTELLPRCGE--VESVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNK 894

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAF---PHLTENQIKVTVQGMFDFNNDLP 177
                                +  ++   L+        L+  Q     Q +     +  
Sbjct: 895 H----------------CFSLLSMWIKEALQPPGFPSARLSPEQKDTFSQQILRERVNKR 938

Query: 178 AFKEHLRDFLVQIREFTGEDDSDLF 202
             KE +++F +  R   G D +  +
Sbjct: 939 RVKEMVKEFTLLCRGLHGTDYTADY 963

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Length = 980

 Score = 93.8 bits (232), Expect = 2e-22
 Identities = 20/199 (10%), Positives = 63/199 (31%), Gaps = 22/199 (11%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIP--QPQFKLVLDSII-WAFKHTMRNV 57
               D  +  + R ++   +  +    F + L     Q  F  +++SI+ +A        
Sbjct: 798 QGTDDAVKQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINSILHFANLVGEPAT 857

Query: 58  ADTGLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSY 117
             + + ++ +++            + +  +   +    F +  + + +        +L  
Sbjct: 858 QKSSIALVSKMVSLWG---GKDGIAGFENFTLSLTPLCFEMPVNPNFNTRDGQSLVVLGE 914

Query: 118 MFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFP--HLTENQIKVTVQGMFDFNND 175
           +  L +                     + +  +   FP  +  +      +Q +   N D
Sbjct: 915 LAGLQKIILEKLG------------DIYKSYLVTVYFPTVNFPDVMASEYLQAL--SNLD 960

Query: 176 LPAFKEHLRDFLVQIREFT 194
             +FK+  + F+  ++   
Sbjct: 961 SRSFKQFFQKFIQALKSGN 979

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Length = 971

 Score = 90.1 bits (222), Expect = 5e-21
 Identities = 20/196 (10%), Positives = 50/196 (25%), Gaps = 16/196 (8%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
              ++F    +    FF  L  + +   P  L      +  ++                 
Sbjct: 790 TPEQNFSNISDTMETFFGCLTQI-IKKIPQVLEDKTLAYDRLVFYAQRGMTLPESGAIRN 848

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
            +  L   ++   + A        +    + L      V   +  + +   A IL  M +
Sbjct: 849 SIQFLTHFVMQSRNHAH--VTEVVLATGEQTLYTAMMCVGYLTPRSQVDKFADILLAMNR 906

Query: 121 LVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK 180
                   A     +     +               +T+         +     +    +
Sbjct: 907 KY--AAEMAVWMKSLMSTPNFPT-----------QLITDADKTRYTALIIKEKVNKRLLQ 953

Query: 181 EHLRDFLVQIREFTGE 196
           +HL +  ++ R  T +
Sbjct: 954 QHLSEMAMKTRGLTEK 969

>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens} Length = 1204

 Score = 42.7 bits (99), Expect = 5e-05
 Identities = 9/81 (11%), Positives = 20/81 (24%), Gaps = 1/81 (1%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAF-KHTMRNVAD 59
           ++ K      +       L   +    F     IP  + + +L   +            +
Sbjct: 850 ILGKAGPSMQQDFYTVEDLATQLLSSAFVNLNNIPDYRLRPMLRVFVKPLVLFCPPEHYE 909

Query: 60  TGLMILHQLLVNVCHDAQSAA 80
             +  +   L    H   S  
Sbjct: 910 ALVSPILGPLFTYLHMRLSQK 930

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 30/216 (13%), Positives = 62/216 (28%), Gaps = 57/216 (26%)

Query: 26  HCFPAFLLIPQPQFKLVLDSIIWAFKHT---MRNV-----------ADTGLMILHQLLVN 71
           + +   L + +  F    D      K      +++           +   +    +L   
Sbjct: 16  YQYKDILSVFEDAFVDNFD-----CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70

Query: 72  VCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPL 131
           +    +   Q F      E+L   +  +     +           Y    +E R+     
Sbjct: 71  LLSKQEEMVQKF----VEEVLRINYKFLMSPIKTEQRQPSMMTRMY----IEQRD----- 117

Query: 132 APGVTDNVVYVQEFVAR-----TLKSAFPHLTENQIKVTVQGMFDFNNDLPAFK-----E 181
                DN V+ +  V+R      L+ A   L   +  V + G+          K     +
Sbjct: 118 -RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK-NVLIDGVLGSG------KTWVALD 169

Query: 182 HLRDFLVQIR-EFT------GEDDSDLFLDEIEQTL 210
               + VQ + +F          +S   + E+ Q L
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
1w9c_A	321	CRM1 protein, exportin 1; nuclear protein, nuclear	100.0
3gjx_A	1073	Exportin-1; transport, cytoplasm, nucleus, RNA-bin	100.0
4hat_C	1023	Exportin-1; heat repeat, nuclear export, RAN-ranbp	100.0
3m1i_C	1049	Exportin-1; heat repeat, GTP-binding, nucleotide-b	100.0
2x19_B	963	Importin-13; nuclear transport, protein transport;	99.91
2x1g_F	971	Cadmus; transport protein, developmental protein,	99.49
3ibv_A	980	Exportin-T; karyopherin, heat repeat, cytoplasm, n	93.14
4fdd_A	852	Transportin-1; heat repeats, karyopherin, nuclear	83.41

>1w9c_A CRM1 protein, exportin 1; nuclear protein, nuclear export complex; 2.3A {Homo sapiens} SCOP: a.118.1.19

Probab=100.00  E-value=9.4e-78  Score=545.82  Aligned_cols=194  Identities=71%  Similarity=1.145  Sum_probs=189.2

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||||||++|||||++||+||+|||.|||++|+++||++||++||||+||||||||||+|+||++|.++++|+++.+ +++
T Consensus       127 MI~~df~eyPehR~~Ff~LL~ai~~~cF~al~~lp~~~fklvidsiiWa~kH~~r~V~e~gL~il~~ll~n~~~~~-~~~  205 (321)
T 1w9c_A          127 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE-AAA  205 (321)
T ss_dssp             HHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHCH-HHH
T ss_pred             HHhcccccChHHHHHHHHHHHHHHHHhHHHHHcCCHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHhcCh-HHH
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999998644 899


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC-CCCcHHHHHHHHHHHHHhhCCCCCH
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTE  159 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~-~~~n~~~v~~~l~~lL~~~Fp~l~~  159 (223)
                      ++||++||++|+++||+|+|||+|||||++||+||++||++||+|+|++|||++ |.+|.+||++|++++|+++||||++
T Consensus       206 ~~Fy~~fy~~il~~if~VlTDs~Hk~gF~~q~~iL~~lf~~ve~~~i~~pl~~~~~~~n~~~v~~~l~~lL~~~Fp~l~~  285 (321)
T 1w9c_A          206 QSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQD  285 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHHHHHTTCCCSCSCSSSCCCHHHHHHHHHHHHHHHHCTTSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchhhccHHHHHHHHHHHHHHHHcCccccccCCCCCcccHHHHHHHHHHHHHHhCCCCCH
Confidence            999999999999999999999999999999999999999999999999999985 4578999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccC
Q psy4089         160 NQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTG  195 (223)
Q Consensus       160 ~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g  195 (223)
                      +||++||.|||++++|+++||+||||||||+|||+|
T Consensus       286 ~qi~~fv~glf~~~~d~~~Fk~~lrDFLIqiKEf~g  321 (321)
T 1w9c_A          286 AQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAG  321 (321)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999987

>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A

Probab=100.00  E-value=9.5e-71  Score=562.11  Aligned_cols=221  Identities=69%  Similarity=1.116  Sum_probs=214.5

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||++||++|||||++||+||+++|+|||++|+++|+++||+|||||+|||||++|+|+|+||+++.++++|+.+.+ +++
T Consensus       835 mi~~~f~~~Pe~r~~ff~ll~~~~~~~f~~l~~l~~~~~~~~i~~i~wa~kh~~r~i~~~~l~~~~~ll~~~~~~~-~~~  913 (1073)
T 3gjx_A          835 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE-AAA  913 (1073)
T ss_dssp             HHSSCSSSCHHHHHHHHHHHHHHHHHCGGGTTTSCHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHTTCH-HHH
T ss_pred             HHhCCcccCcHHHHHHHHHHHHHHHHHhHHHHcCCHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHhhcCh-HHH
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999998654 799


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC-CCCcHHHHHHHHHHHHHhhCCCCCH
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTE  159 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~-~~~n~~~v~~~l~~lL~~~Fp~l~~  159 (223)
                      ++||++||++|+++||+|+||++|||||++||+||++||.+|++|+|++||++. +++|.+||++|++++|+++|||+++
T Consensus       914 ~~F~~~~~~~~~~~i~~v~td~~h~~~f~~q~~il~~l~~~~~~~~i~~~l~~~~~~~n~~~~~~~~~~~l~~~fp~~~~  993 (1073)
T 3gjx_A          914 QSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTPLNPGNPVNNQMFIQDYVANLLKSAFPHLQD  993 (1073)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCGGGHHHHHHHHHHHHHHHTTTCCSCSSSCTTTTCHHHHHHHHHHHHHHHHCTTSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCchHhhhhhHHHHHHHHHHHHHHcCCccccccccCCCccHHHHHHHHHHHHHHhCCCCCH
Confidence            999999999999999999999999999999999999999999999999999963 4579999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCCCchhcHHHHHHHHHHHHHHHHHhhc
Q psy4089         160 NQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQTLKQAQEKKRQTQL  222 (223)
Q Consensus       160 ~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d~~dL~~eEre~~~~~~~~~~~~~~~  222 (223)
                      +||+.||.|||+.++|+.+||+||||||||+|||+|+|++|||+||||+++++|++++|++++
T Consensus       994 ~qi~~fv~~l~~~~~d~~~f~~~lrDFli~~ke~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1056 (1073)
T 3gjx_A          994 AQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTSDLFLEERETALRQAQEEKHKLQM 1056 (1073)
T ss_dssp             HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTSCCTTTCCTTCTTHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCCcHHHhHHHHHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999999999999999999999875

>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B

Probab=100.00  E-value=4.3e-65  Score=517.91  Aligned_cols=209  Identities=40%  Similarity=0.662  Sum_probs=195.0

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhccc-chHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHD-AQSA   79 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~-~~~~   79 (223)
                      ||++||++|||||++||+||+++|++||++|+++|+++||++||||+||+||++|+|+++||+++.++++|+.+. ++++
T Consensus       809 mi~~~~~~~Pe~r~~ff~ll~~~~~~~f~~~~~~~~~~~~~~~~~~~~a~~h~~r~~~~~~l~~~~~ll~~~~~~~~~~~  888 (1023)
T 4hat_C          809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPF  888 (1023)
T ss_dssp             HHSSCSSSSHHHHHHHHHHHHHHHHHCTHHHHTSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHCSSHH
T ss_pred             HHhcccccChHHHHHHHHHHHHHHHHChHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCChHH
Confidence            899999999999999999999999999999999999999999999999999999999999999999999999853 2479


Q ss_pred             HHHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC-----CCCcHHHHHHHHHHHHHhhC
Q psy4089          80 AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG-----VTDNVVYVQEFVARTLKSAF  154 (223)
Q Consensus        80 ~~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~-----~~~n~~~v~~~l~~lL~~~F  154 (223)
                      +++||++||++|+++||+|+||++|||||++||+||++||.+|++|+|++|||++     +.+|.+||++|++++|+++|
T Consensus       889 ~~~f~~~~~~~~~~~~~~v~td~~h~~~f~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~f  968 (1023)
T 4hat_C          889 ANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAF  968 (1023)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSSCGGGHHHHHHHHHHHHHHHHTTCCCSCSSCTTSSCTTCCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHHcCCcccccCCccccCCCCchHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999999983     26888999999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCCCchhcHHHHHHH
Q psy4089         155 PHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSDLFLDEIEQT  209 (223)
Q Consensus       155 p~l~~~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d~~dL~~eEre~~  209 (223)
                      ||++++||+.||.|||+.++|+.+||+||||||||+|||+|++++|||+||||++
T Consensus       969 p~~~~~qi~~fv~~l~~~~~~~~~f~~~lrdfli~~ke~~~~~~~~~~~~~~~~~ 1023 (1023)
T 4hat_C          969 PHLTSEQIASFLSALTKQCKDLVVFKGTLRDFLVQIKEVGGDPTDYLFAEDKENA 1023 (1023)
T ss_dssp             TTSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTSSSCCGGGGGCC------
T ss_pred             CCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHHhHhhcCCChHHHhHHhhhcC
Confidence            9999999999999999999999999999999999999999966557999999874

>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B

Probab=100.00  E-value=4.6e-50  Score=403.10  Aligned_cols=221  Identities=40%  Similarity=0.664  Sum_probs=198.7

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcc-cchHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCH-DAQSA   79 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~-~~~~~   79 (223)
                      ||++|++++||||..||.||.+++.+||+.++.+||++++.++++++||++|++|++...||+++.+++++... .+++.
T Consensus       809 ~i~~~~~~~pd~~~~~f~ll~~i~~~~~~~l~~~~~~~~~~v~~~~~~al~~~~~~~~~~~l~~l~~l~~~~~~~~~~~~  888 (1049)
T 3m1i_C          809 MINKDFTEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHNNRDVEVNGLQIALDLVKNIERMGNVPF  888 (1049)
T ss_dssp             HHSSCSSSSHHHHHHHHHHHHHHHHHCTHHHHHSCHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHSCSCHH
T ss_pred             HHhcchhhCHHHHHHHHHHHHHHHHhCHHHHHcCCHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhcCChHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999874 23378


Q ss_pred             HHHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC---C--CCcHHHHHHHHHHHHHhhC
Q psy4089          80 AQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG---V--TDNVVYVQEFVARTLKSAF  154 (223)
Q Consensus        80 ~~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~---~--~~n~~~v~~~l~~lL~~~F  154 (223)
                      +++||++||.+|++++|+|+||++|||||+.||.+|++||.++++|+|++|+|++   |  .+|..|+++|++++|.++|
T Consensus       889 ~~~f~~~~~~~l~~~~~~~l~~~~h~s~~~~~~~~l~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~  968 (1049)
T 3m1i_C          889 ANEFHKNYFFIFVSETFFVLTDSDHKSGFSKQALLLMKLISLVYDNKISVPLYQEAEVPQGTSNQVYLSQYLANMLSNAF  968 (1049)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHHHHTTCCCSCSSCGGGSSTTCCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchHhhhHHHHHHHHHHHHHHHhcCcccccccCccccCCCCCcHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999999873   2  3688899999999999999


Q ss_pred             CCCCHHHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCCCch-hcHHHHHHHHHHHHHHHHHhhc
Q psy4089         155 PHLTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGEDDSD-LFLDEIEQTLKQAQEKKRQTQL  222 (223)
Q Consensus       155 p~l~~~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d~~d-L~~eEre~~~~~~~~~~~~~~~  222 (223)
                      ||++++|++.||.+||+.++|..+||++||||+|++|||+| |++| ||+||||+++++|++++|++++
T Consensus       969 ~~~~~~~~~~f~~~l~~~~~~~~~f~~~~rdf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1049)
T 3m1i_C          969 PHLTSEQIASFLSALTKQYKDLVVFKGTLRDFLVQIKEVGG-DPTDYLFAEDKENALMEQNRLEREKAA 1036 (1049)
T ss_dssp             TTSCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTSSSC-CGGGGGGGGGTTTC-------------
T ss_pred             CCCCHHHHHHHHHHHHHccCCHHHHHHHHHHHhHhhhhhcC-CchhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999 8888 9999999999999999988764

>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B

Probab=99.91  E-value=7.7e-24  Score=208.40  Aligned_cols=178  Identities=17%  Similarity=0.213  Sum_probs=156.5

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||++|+.+|||+|..||.||.+++.+|+..+++ ++.+|+.++++++||++|++|++...|++.+.+++++... . +..
T Consensus       778 ~~~~~~~~~pd~~~~~f~ll~~~~~~~~~~~~~-~~~~~~~i~~~~~~~l~~~~~~~~~~~l~~l~~l~~~~~~-~-~~~  854 (963)
T 2x19_B          778 LFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLC-ERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCGE-V-ESV  854 (963)
T ss_dssp             HHHHCTTTCHHHHHHHHHHHHHHHHHCGGGGGC-TTSCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHGGGTTS-S-CHH
T ss_pred             HHhhCcccCchHHHHHHHHHHHHHHhCcHHHcC-CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCC-h-HHH
Confidence            456789999999999999999999999999986 5556999999999999999999999999999999987652 2 578


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCCCCCcHHHHHHHHHHHH-HhhCC--CC
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTL-KSAFP--HL  157 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~~~~n~~~v~~~l~~lL-~~~Fp--~l  157 (223)
                      ++|++.|+..|+..+|.+++|..|++++..++.+|..|+.   .             +..++++|+.++| .+.||  ++
T Consensus       855 ~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~il~~l~~---~-------------~~~~~~~~l~~~l~~~~~p~~~~  918 (963)
T 2x19_B          855 GKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNK---H-------------CFSLLSMWIKEALQPPGFPSARL  918 (963)
T ss_dssp             HHHTTTSHHHHHHHHHHHHTTTSCGGGHHHHHHHHHHHHH---H-------------SHHHHHHHHHHHTCSTTSSCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCChhHHHHHHHHHHHHHH---H-------------ChHHHHHHHHHHhcccCCCCCcC
Confidence            8999999999999999999999999999999999965432   1             3558899999999 57899  99


Q ss_pred             CHHHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccCCC
Q psy4089         158 TENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTGED  197 (223)
Q Consensus       158 ~~~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g~d  197 (223)
                      +++|.+.|+.+|+....|..+||.++|||++++|+++|.+
T Consensus       919 ~~~~~~~f~~~l~~~~~~~~~f~~~l~~F~~~~r~~~~~~  958 (963)
T 2x19_B          919 SPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGTD  958 (963)
T ss_dssp             CHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHC-----
T ss_pred             CHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHcCccCcc
Confidence            9999999999999887799999999999999999998854

>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}

Probab=99.49  E-value=9e-13  Score=130.47  Aligned_cols=172  Identities=10%  Similarity=0.131  Sum_probs=147.3

Q ss_pred             ccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy4089           5 DFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFY   84 (223)
Q Consensus         5 df~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~~~Fy   84 (223)
                      ++.+.||+|..||.|+..+..+|+..++. +|.++..++++.+||++|.+|++...+++.+..++..- ... +..++|.
T Consensus       794 ~~~~~pd~~~~~f~ll~~~l~~~p~~~~~-s~~~l~~i~~~~~~~l~~~~~~~~~s~~~fl~~~i~~~-~~~-~~~~~~~  870 (971)
T 2x1g_F          794 NFSNISDTMETFFGCLTQIIKKIPQVLED-KTLAYDRLVFYAQRGMTLPESGAIRNSIQFLTHFVMQS-RNH-AHVTEVV  870 (971)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHHSSGGGGGC-TTSCHHHHHHHHHHHHTSSCSSHHHHHHHHHHHHHHHH-TTC-HHHHHHH
T ss_pred             CCccCchHHHHHHHHHHHHHHhCcHHHcC-CcccHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcC-Cch-HHHHHHH
Confidence            67789999999999999999999999876 44448999999999999999999999999999988762 223 6788999


Q ss_pred             HHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCCCCCcHHHHHHHHHHHHH-hhCCC--CCHHH
Q psy4089          85 VTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLK-SAFPH--LTENQ  161 (223)
Q Consensus        85 ~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~~~~n~~~v~~~l~~lL~-~~Fp~--l~~~q  161 (223)
                      .++...++..++..+++..+++.+...+.+|..|+..--                .-...|+.+.|. ..||+  +++++
T Consensus       871 ~~~g~~l~~~l~~~~~~~~~~s~~~~~a~~l~~l~~~~~----------------~~~~~~l~~~l~~~~~p~~~~~~~~  934 (971)
T 2x1g_F          871 LATGEQTLYTAMMCVGYLTPRSQVDKFADILLAMNRKYA----------------AEMAVWMKSLMSTPNFPTQLITDAD  934 (971)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCGGGGGGGHHHHHHHHHHHH----------------HHHHHHHHHHHTSSSCSCSSSCHHH
T ss_pred             HHhHHHHHHHHHHHhcccCChhHHHHHHHHHHHHHHHCc----------------HHHHHHHHHHhcccCCCCCcCCHHH
Confidence            999999999999999999999999999999999876532                134667877763 46886  89999


Q ss_pred             HHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccC
Q psy4089         162 IKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTG  195 (223)
Q Consensus       162 i~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g  195 (223)
                      .+.|+..|+....+..+||.++|||..+.|..+|
T Consensus       935 ~~~f~~~l~~~~~~~r~~~~~~~~f~~~~r~~~~  968 (971)
T 2x1g_F          935 KTRYTALIIKEKVNKRLLQQHLSEMAMKTRGLTE  968 (971)
T ss_dssp             HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHhChHhHHHHHHHHHHHHcCccc
Confidence            9999999998755799999999999999999877

>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T*

Probab=93.14  E-value=0.47  Score=48.07  Aligned_cols=160  Identities=11%  Similarity=0.181  Sum_probs=82.3

Q ss_pred             cChhhhHHHHHHHHHHHhc-chhhhhcCC-chhHHHHHHHHH-HHhCCCCchHHHHHHHHHHHHHHHhcccchHHHHHHH
Q psy4089           8 EYPEHRTNFFLLLQAVNLH-CFPAFLLIP-QPQFKLVLDSII-WAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFY   84 (223)
Q Consensus         8 ~yPEhR~~Ff~LL~ai~~~-cF~all~lp-~~~fklvidsi~-Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~~~Fy   84 (223)
                      +=++-|..||.+|.+|.++ |-+.|++-+ ...|..++.+++ .|..|++..+.-+++.++..+++-..+.+  . -.=|
T Consensus       805 ~~~~l~r~~~~fl~~i~~~~~~~v~~s~~n~~~l~~~l~~l~~~a~~~~d~~~~K~a~~~l~~~v~~~~~~~--~-~~gf  881 (980)
T 3ibv_A          805 KQNDLRKSYISFILQLLNKGFGSILFTEENQVYFDPLINSILHFANLVGEPATQKSSIALVSKMVSLWGGKD--G-IAGF  881 (980)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCTGGGGSHHHHTTHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHC----------CCH
T ss_pred             HHHHHHHHHHHHHHHHHhCCchhhhcCCcchHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHCCCC--c-chHH
Confidence            3356789999999999985 455544332 367899999999 77889999999999999999987764322  1 2234


Q ss_pred             HHHHHHHHHHHhHHhcCCCch-------hhhHHHHHHHHHHHHHHHhCcccccCCCCCCCcHHHHHHHHHHHHHhhCCC-
Q psy4089          85 VTYFTEILTHVFSVVTDTSHS-------ASLAHHAQILSYMFKLVETREVAAPLAPGVTDNVVYVQEFVARTLKSAFPH-  156 (223)
Q Consensus        85 ~~yy~~il~~vf~VlTDt~Hk-------sgF~~q~~iL~~Lf~lve~~~i~~pl~~~~~~n~~~v~~~l~~lL~~~Fp~-  156 (223)
                      .+|.++++--.|.+..++...       .-+..=+.+|+.+..--               ..    +|+.-|-.+-||+ 
T Consensus       882 ~~f~~~~~~~~f~~p~~~~f~~~Daq~~~~~~e~~~~~k~~~~~~---------------g~----~~~~~l~~~~lp~~  942 (980)
T 3ibv_A          882 ENFTLSLTPLCFEMPVNPNFNTRDGQSLVVLGELAGLQKIILEKL---------------GD----IYKSYLVTVYFPTV  942 (980)
T ss_dssp             HHHHHHHHHHHHHGGGC----------CHHHHHHHHHHHHHHHHH---------------HH----HHHHHHHHTTTTC-
T ss_pred             HHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHHHHHHHHHHHhc---------------CH----HHHHHHHHhcCCcC
Confidence            556555666778888776631       11222233333221110               12    2333333345676 


Q ss_pred             -CCHHHHHHHHHHHhhcCCChhHHHHHHHHHhHhhh
Q psy4089         157 -LTENQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIR  191 (223)
Q Consensus       157 -l~~~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiK  191 (223)
                       ++++.+..|+..|  ...|...||.-+.+|.-++|
T Consensus       943 ~~~~~~~~~~~~~l--~~~~~k~f~~~~~~~~~~~~  976 (980)
T 3ibv_A          943 NFPDVMASEYLQAL--SNLDSRSFKQFFQKFIQALK  976 (980)
T ss_dssp             ---CCHHHHHHHC------------------CHHHH
T ss_pred             CCCHHHHHHHHHHH--hccchhhHHHHHHHHHHHhh
Confidence             4677788999999  34589999999999988876

>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*

Probab=83.41  E-value=24  Score=33.94  Aligned_cols=101  Identities=13%  Similarity=0.204  Sum_probs=74.5

Q ss_pred             cChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Q psy4089           8 EYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAAQSFYVTY   87 (223)
Q Consensus         8 ~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~~~Fy~~y   87 (223)
                      ..|+.|...+.++.++...|...+...    +..++..++-++.+..+++...+...+.++..++..   +     ++.|
T Consensus       641 ~~~~vr~~a~~~l~~l~~~~~~~~~~~----l~~~lp~l~~~l~~~~~~v~~~a~~alg~i~~~~~~---~-----~~p~  708 (852)
T 4fdd_A          641 KMPEVRQSSFALLGDLTKACFQHVKPC----IADFMPILGTNLNPEFISVCNNATWAIGEISIQMGI---E-----MQPY  708 (852)
T ss_dssp             SSHHHHHHHHHHHHHHHHHCGGGTGGG----HHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHGG---G-----GGGG
T ss_pred             CChhHHHHHHHHHHHHHHHhhHHHHHH----HHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhH---h-----HHHH
Confidence            458999999999999999998875543    556788888888999999999999988888888742   2     2356


Q ss_pred             HHHHHHHHhHHhcCCC-chhhhHHHHHHHHHHHH
Q psy4089          88 FTEILTHVFSVVTDTS-HSASLAHHAQILSYMFK  120 (223)
Q Consensus        88 y~~il~~vf~VlTDt~-HksgF~~q~~iL~~Lf~  120 (223)
                      .-.++..++.++.++. |++--..=+..+.+|..
T Consensus       709 ~~~il~~L~~~l~~~~~~~~~~~~a~~~igrl~~  742 (852)
T 4fdd_A          709 IPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY  742 (852)
T ss_dssp             THHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHH
Confidence            6677888888887765 44444444445555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	223
d1w9ca_	321	a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Ho	2e-76

>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Exportin HEAT-like repeat
domain: Exportin-1 (Xpo1, Crm1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  230 bits (589), Expect = 2e-76
 Identities = 137/196 (69%), Positives = 157/196 (80%), Gaps = 2/196 (1%)

Query: 1   MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADT 60
           MINKDFEEYPEHRTNFFLLLQAVN HCFPAFL IP  QFKLVLDSIIWAFKHTMRNVADT
Sbjct: 127 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADT 186

Query: 61  GLMILHQLLVNVCHDAQSAAQSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFK 120
           GL IL  LL NV    ++AAQSFY TYF +IL H+FSVVTDTSH+A L  HA IL+YMF 
Sbjct: 187 GLQILFTLLQNV-AQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFN 245

Query: 121 LVETREVAAPLAPGV-TDNVVYVQEFVARTLKSAFPHLTENQIKVTVQGMFDFNNDLPAF 179
           LVE  +++  L PG   +N +++QE+VA  LKSAFPHL + Q+K+ V G+F  N D+PAF
Sbjct: 246 LVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAF 305

Query: 180 KEHLRDFLVQIREFTG 195
           KEHLRDFLVQI+EF G
Sbjct: 306 KEHLRDFLVQIKEFAG 321

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	223
d1w9ca_	321	Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [Tax	100.0

>d1w9ca_ a.118.1.19 (A:) Exportin-1 (Xpo1, Crm1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Exportin HEAT-like repeat
domain: Exportin-1 (Xpo1, Crm1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-70  Score=492.81  Aligned_cols=194  Identities=71%  Similarity=1.145  Sum_probs=189.5

Q ss_pred             CcccccccChhhhHHHHHHHHHHHhcchhhhhcCCchhHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHhcccchHHH
Q psy4089           1 MINKDFEEYPEHRTNFFLLLQAVNLHCFPAFLLIPQPQFKLVLDSIIWAFKHTMRNVADTGLMILHQLLVNVCHDAQSAA   80 (223)
Q Consensus         1 MI~kdf~~yPEhR~~Ff~LL~ai~~~cF~all~lp~~~fklvidsi~Wa~kHt~r~I~e~GL~il~~ll~n~~~~~~~~~   80 (223)
                      ||++||++|||||++||+||++||++||++++++|+++||++||||+||+|||+|+|+++||+++.++++|+..++ +++
T Consensus       127 MI~~df~~yPehR~~ff~LL~~i~~~cf~~ll~lp~~qf~~vidsi~wa~kH~~~~V~~~gL~~l~~ll~n~~~~~-~~~  205 (321)
T d1w9ca_         127 MINKDFEEYPEHRTNFFLLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILFTLLQNVAQEE-AAA  205 (321)
T ss_dssp             HHSSTTTCSHHHHHHHHHHHHHHHHHCTTHHHHSCHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHCH-HHH
T ss_pred             HHhccchhChHHHHHHHHHHHHHHHHCHHHHHcCCHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHhhCh-HHH
Confidence            8999999999999999999999999999999999999999999999999999999999999999999999998765 789


Q ss_pred             HHHHHHHHHHHHHHHhHHhcCCCchhhhHHHHHHHHHHHHHHHhCcccccCCCC-CCCcHHHHHHHHHHHHHhhCCCCCH
Q psy4089          81 QSFYVTYFTEILTHVFSVVTDTSHSASLAHHAQILSYMFKLVETREVAAPLAPG-VTDNVVYVQEFVARTLKSAFPHLTE  159 (223)
Q Consensus        81 ~~Fy~~yy~~il~~vf~VlTDt~HksgF~~q~~iL~~Lf~lve~~~i~~pl~~~-~~~n~~~v~~~l~~lL~~~Fp~l~~  159 (223)
                      ++||++||++|+++||+|+||++||+||++||++|++||++||+|+|++|+.+. +++|..||++|++++|+++|||+++
T Consensus       206 ~~F~~~y~~~il~~if~vltD~~Hk~gf~~q~~iL~~Lf~ive~~~i~~~l~~~~~~~n~~~l~e~l~~lL~~~Fp~l~~  285 (321)
T d1w9ca_         206 QSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISTSLNPGNPVNNQIFLQEYVANLLKSAFPHLQD  285 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHHHHHTTCCCSCSCSSSCCCHHHHHHHHHHHHHHHHCTTSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHccccccccccccccchHHHHHHHHHHHHHHhCCCCCH
Confidence            999999999999999999999999999999999999999999999999999874 5889999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCChhHHHHHHHHHhHhhhhccC
Q psy4089         160 NQIKVTVQGMFDFNNDLPAFKEHLRDFLVQIREFTG  195 (223)
Q Consensus       160 ~qi~~FV~~lf~~~~d~~~Fk~~lrDFLIqiKEf~g  195 (223)
                      +||+.||.|||+.++|+.+||+||||||||+|||+|
T Consensus       286 ~qi~~fv~~Lf~~~~d~~~Fk~~lrDFLI~~kef~g  321 (321)
T d1w9ca_         286 AQVKLFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAG  321 (321)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHccCCHHHHHHHHHHHhHHhhhcCC
Confidence            999999999999999999999999999999999998