Psyllid ID: psy4129

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-----
MWRMVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLLRSHL
cHHHHHHHcccEEEEEcHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEccHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHccccEEcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEcEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHcccHHHHccccEEEccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccc
ccHHHHcccccEEEEccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEccHHHHHHHHHHHHHHHHHccccccccccccHHHcccEcHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHEHHHHccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccEEccccccccccHHHHHHHcHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccccHcccccccHccc
mwrmvqrcqpssirlmdnaqfkfgqslrpvpgyfGLLLDGLKRIYITKIKGFSVDEMCVTTLlfegdpedvkKNQAKIYSIALKfggipagetngmrgYMLTFVIAYIRDLALDYHILAESfetsvpwdkAILLCTNVKQRVARECKVMNVEHYLISCRVtqtydagcciyfyfgynfmgqkdpigsydyiehCARDEIIACVMNVEHYLISCRVtqtydagcciyfyfgynfmgqkdpigsydyiehcardeiiacggsishhhgvgklrshwypkqvssVGVELYqstkrqldpknvfanggsishhhgvgklrshwypkqvssVGVELYQstkrqldpknifangnllrshl
mwrmvqrcqpssiRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFegdpedvkKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFetsvpwdkAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYqstkrqldpknifangnllrshl
MWRMVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLLRSHL
*************RLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQ**********************
*W*****CQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLLRS**
********QPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLLRSHL
MWRMVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLL****
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MWRMVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLLRSHL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query355 2.2.26 [Sep-21-2011]
Q9V778631 Alkyldihydroxyacetonephos yes N/A 0.692 0.389 0.424 3e-72
O00116658 Alkyldihydroxyacetonephos yes N/A 0.684 0.369 0.459 2e-68
Q8C0I1645 Alkyldihydroxyacetonephos yes N/A 0.574 0.316 0.567 2e-65
P97275658 Alkyldihydroxyacetonephos yes N/A 0.574 0.310 0.563 7e-65
Q9EQR2644 Alkyldihydroxyacetonephos yes N/A 0.574 0.316 0.563 1e-64
O45218597 Alkyldihydroxyacetonephos yes N/A 0.698 0.415 0.419 2e-64
O96759611 Alkyldihydroxyacetonephos yes N/A 0.656 0.381 0.217 7e-14
O97157613 Alkyldihydroxyacetonephos N/A N/A 0.461 0.267 0.260 2e-10
Q8X7S0484 Uncharacterized FAD-linke N/A N/A 0.245 0.179 0.329 1e-05
Q46911484 Uncharacterized FAD-linke N/A N/A 0.245 0.179 0.329 1e-05
>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1 Back     alignment and function desciption
 Score =  272 bits (695), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 147/346 (42%), Positives = 185/346 (53%), Gaps = 100/346 (28%)

Query: 6   QRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFE 65
           +RCQP+S+RLMDN QF FGQ+L+P   ++  ++D +K+ Y+T  KG  ++++C  TLLFE
Sbjct: 364 RRCQPASVRLMDNEQFMFGQALKPEKSWWASVVDAMKQRYVTSWKGIDLNQICAATLLFE 423

Query: 66  GDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETS 125
           GD +DV++ +A IY IA KF G PAG  NG RGY+LTFVIAYIRD  L   I+AESFETS
Sbjct: 424 GDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIRDFGLHQGIVAESFETS 483

Query: 126 VPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPI 185
           VPWD+  LLC +VKQRV                                           
Sbjct: 484 VPWDRCSLLCRSVKQRV------------------------------------------- 500

Query: 186 GSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDY 245
                +  C++  I        +Y ISCRVTQTYDAG CIYFYFG+      DP+  ++ 
Sbjct: 501 -----VSECSKRSI-------NYYTISCRVTQTYDAGACIYFYFGFRSTDVADPVELFEA 548

Query: 246 IEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGS 305
           IEH ARDEI++C                                             GGS
Sbjct: 549 IEHSARDEILSC---------------------------------------------GGS 563

Query: 306 ISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNIFANGNLL 351
           +SHHHGVGK+RSHWY   V+  G  LY + KR LDPKNIFA GNLL
Sbjct: 564 LSHHHGVGKIRSHWYRNAVTETGSSLYSAAKRHLDPKNIFALGNLL 609

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 6
>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1 Back     alignment and function description
>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1 Back     alignment and function description
>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1 Back     alignment and function description
>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1 Back     alignment and function description
>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1 Back     alignment and function description
>sp|O96759|ADAS_DICDI Alkyldihydroxyacetonephosphate synthase OS=Dictyostelium discoideum GN=eapA PE=1 SV=1 Back     alignment and function description
>sp|O97157|ADAS_TRYBB Alkyldihydroxyacetonephosphate synthase OS=Trypanosoma brucei brucei PE=3 SV=1 Back     alignment and function description
>sp|Q8X7S0|YGCU_ECO57 Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli O157:H7 GN=ygcU PE=3 SV=1 Back     alignment and function description
>sp|Q46911|YGCU_ECOLI Uncharacterized FAD-linked oxidoreductase YgcU OS=Escherichia coli (strain K12) GN=ygcU PE=3 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
242010624 565 predicted protein [Pediculus humanus cor 0.707 0.444 0.542 4e-88
270012218 600 hypothetical protein TcasGA2_TC006332 [T 0.692 0.41 0.538 5e-84
332374582 600 unknown [Dendroctonus ponderosae] 0.695 0.411 0.519 6e-80
157126141419 alkyldihydroxyacetonephosphate synthase 0.707 0.599 0.487 2e-79
345486229 605 PREDICTED: alkyldihydroxyacetonephosphat 0.684 0.401 0.494 1e-77
350421779 610 PREDICTED: alkyldihydroxyacetonephosphat 0.684 0.398 0.505 8e-77
332024393 526 Alkyldihydroxyacetonephosphate synthase 0.695 0.469 0.501 9e-77
170044873 609 alkyldihydroxyacetonephosphate synthase 0.684 0.399 0.5 9e-77
328777397407 PREDICTED: alkyldihydroxyacetonephosphat 0.681 0.594 0.496 2e-76
340716727 610 PREDICTED: alkyldihydroxyacetonephosphat 0.684 0.398 0.505 2e-76
>gi|242010624|ref|XP_002426062.1| predicted protein [Pediculus humanus corporis] gi|212510084|gb|EEB13324.1| predicted protein [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  331 bits (848), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 166/306 (54%), Positives = 203/306 (66%), Gaps = 55/306 (17%)

Query: 7   RCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEG 66
           R QPSSIRLMDN QFKFGQSLRP   YFG++LDG+K+ YIT IK F V++MCVTTLLFEG
Sbjct: 315 RYQPSSIRLMDNEQFKFGQSLRPTSNYFGVILDGIKKTYITTIKKFDVNKMCVTTLLFEG 374

Query: 67  DPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSV 126
           + ++++  + +IY IA  FGGIPAGE NG RGY LTFVIAYIRD ALD+ I AESFETSV
Sbjct: 375 NAKEIEIQEKRIYEIAKTFGGIPAGEKNGQRGYTLTFVIAYIRDFALDFKIFAESFETSV 434

Query: 127 PWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIG 186
           PWD+A+ LC NVK                   RVT+                        
Sbjct: 435 PWDRALALCNNVK------------------FRVTK------------------------ 452

Query: 187 SYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYI 246
                  C +         ++++LIS RVTQ+YD+GCCIYFYFG+N    ++P+ SY+ I
Sbjct: 453 ------ECEKH-------GIKYFLISARVTQSYDSGCCIYFYFGFNGAEIENPLKSYEEI 499

Query: 247 EHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSI 306
           E  ARDEI+A GGSISHHHGVGKLRS WYP+QVS +GVEL++ TK QLDPKN+FANG  I
Sbjct: 500 EEAARDEILAVGGSISHHHGVGKLRSRWYPQQVSKLGVELFKLTKAQLDPKNIFANGNLI 559

Query: 307 SHHHGV 312
           + H  +
Sbjct: 560 NLHSNL 565

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|270012218|gb|EFA08666.1| hypothetical protein TcasGA2_TC006332 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|332374582|gb|AEE62432.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|157126141|ref|XP_001654556.1| alkyldihydroxyacetonephosphate synthase [Aedes aegypti] gi|108873400|gb|EAT37625.1| AAEL010405-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|345486229|ref|XP_001599952.2| PREDICTED: alkyldihydroxyacetonephosphate synthase-like [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|350421779|ref|XP_003492954.1| PREDICTED: alkyldihydroxyacetonephosphate synthase-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332024393|gb|EGI64591.1| Alkyldihydroxyacetonephosphate synthase [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|170044873|ref|XP_001850055.1| alkyldihydroxyacetonephosphate synthase [Culex quinquefasciatus] gi|167867980|gb|EDS31363.1| alkyldihydroxyacetonephosphate synthase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|328777397|ref|XP_003249334.1| PREDICTED: alkyldihydroxyacetonephosphate synthase-like [Apis mellifera] Back     alignment and taxonomy information
>gi|340716727|ref|XP_003396846.1| PREDICTED: alkyldihydroxyacetonephosphate synthase-like [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query355
UNIPROTKB|F1P5J7638 AGPS "Uncharacterized protein" 0.574 0.319 0.592 3.2e-81
FB|FBgn0033983631 CG10253 [Drosophila melanogast 0.574 0.323 0.558 1.4e-80
ZFIN|ZDB-GENE-031118-14629 agps "alkylglycerone phosphate 0.574 0.324 0.577 2.2e-80
UNIPROTKB|O00116658 AGPS "Alkyldihydroxyacetonepho 0.574 0.310 0.572 4.6e-78
UNIPROTKB|E1BPV2576 AGPS "Uncharacterized protein" 0.574 0.354 0.572 9.5e-78
MGI|MGI:2443065645 Agps "alkylglycerone phosphate 0.574 0.316 0.567 1.2e-77
UNIPROTKB|E2QVV9653 AGPS "Uncharacterized protein" 0.574 0.312 0.567 2.5e-77
UNIPROTKB|F6Y1U6663 AGPS "Uncharacterized protein" 0.574 0.307 0.567 2.5e-77
UNIPROTKB|P97275658 AGPS "Alkyldihydroxyacetonepho 0.574 0.310 0.563 4.1e-77
RGD|620364644 Agps "alkylglycerone phosphate 0.574 0.316 0.563 8.5e-77
UNIPROTKB|F1P5J7 AGPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 655 (235.6 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
 Identities = 122/206 (59%), Positives = 154/206 (74%)

Query:     6 QRCQPSSIRLMDNAQFKFGQSLRP-VPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLF 64
             QRC P+SIRL+DNAQF+FG +L+P V   F   LDGLK+ YITK KGF  + +CV TLLF
Sbjct:   391 QRCAPASIRLVDNAQFQFGHALKPQVASIFTSFLDGLKKFYITKFKGFDPNVLCVATLLF 450

Query:    65 EGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFET 124
             EGD E V +++ ++Y IA KFGG+ AGE NG RGYMLTFVIAY+RDL LDY+++ ESFET
Sbjct:   451 EGDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLRDLGLDYYVIGESFET 510

Query:   125 SVPWDKAILLCTNVKQRVARECKVMNVEHYLIS-CRVTQTYDAGCCIYFYFGYNFMGQKD 183
             SVPWD+ + LC NVK+R+ RECK   V+    S CRVTQTYDAG C+YFYF +N+ G  D
Sbjct:   511 SVPWDRVLDLCRNVKERIVRECKEKGVQFAPFSTCRVTQTYDAGACVYFYFAFNYRGISD 570

Query:   184 PIGSYDYIEHCARDEIIACVMNVEHY 209
             PI  Y+ IE  AR+EI+A   ++ H+
Sbjct:   571 PIHVYEEIERAAREEILANGGSLSHH 596
GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA
GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA
GO:0005739 "mitochondrion" evidence=IEA
GO:0005778 "peroxisomal membrane" evidence=IEA
GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
FB|FBgn0033983 CG10253 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031118-14 agps "alkylglycerone phosphate synthase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|O00116 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BPV2 AGPS "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:2443065 Agps "alkylglycerone phosphate synthase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVV9 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F6Y1U6 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P97275 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Cavia porcellus (taxid:10141)] Back     alignment and assigned GO terms
RGD|620364 Agps "alkylglycerone phosphate synthase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9EQR2ADAS_RAT2, ., 5, ., 1, ., 2, 60.56310.57460.3167yesN/A
P97275ADAS_CAVPO2, ., 5, ., 1, ., 2, 60.56310.57460.3100yesN/A
Q8C0I1ADAS_MOUSE2, ., 5, ., 1, ., 2, 60.56790.57460.3162yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
pfam02913247 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-t 2e-21
pfam02913247 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-t 8e-15
pfam02913247 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-t 6e-13
COG0277459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 2e-07
COG0277459 COG0277, GlcD, FAD/FMN-containing dehydrogenases [ 2e-06
TIGR00387413 TIGR00387, glcD, glycolate oxidase, subunit GlcD 6e-05
TIGR00387413 TIGR00387, glcD, glycolate oxidase, subunit GlcD 9e-05
>gnl|CDD|217283 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-terminal domain Back     alignment and domain information 
 Score = 91.7 bits (228), Expect = 2e-21
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 207 EHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHG 266
           ++ L+ C      D    +Y  F      +++   +  + E    D   A GGSIS  HG
Sbjct: 152 KYGLVICHFGHVGDGNLHLYILFDAKDPEEEERAEAL-FDE--LADLAAALGGSISGEHG 208

Query: 267 VGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANG 303
           VG+ +  +  ++    G+ L +  K   DP N+   G
Sbjct: 209 VGRDKKPYLEEEFGPEGLALMRRIKAAFDPNNILNPG 245

This domain has a ferredoxin-like fold. Length = 247
>gnl|CDD|217283 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-terminal domain Back     alignment and domain information
>gnl|CDD|217283 pfam02913, FAD-oxidase_C, FAD linked oxidases, C-terminal domain Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|129482 TIGR00387, glcD, glycolate oxidase, subunit GlcD Back     alignment and domain information
>gnl|CDD|129482 TIGR00387, glcD, glycolate oxidase, subunit GlcD Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 355
KOG1233|consensus613 100.0
PF02913248 FAD-oxidase_C: FAD linked oxidases, C-terminal dom 100.0
PLN02805555 D-lactate dehydrogenase [cytochrome] 99.97
PRK11230499 glycolate oxidase subunit GlcD; Provisional 99.95
TIGR00387413 glcD glycolate oxidase, subunit GlcD. This protein 99.95
PLN02805555 D-lactate dehydrogenase [cytochrome] 99.82
PF02913248 FAD-oxidase_C: FAD linked oxidases, C-terminal dom 99.81
TIGR00387413 glcD glycolate oxidase, subunit GlcD. This protein 99.71
PRK11230499 glycolate oxidase subunit GlcD; Provisional 99.71
KOG1232|consensus511 99.69
COG0277459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 99.63
KOG1232|consensus511 99.48
KOG1231|consensus505 99.36
KOG1233|consensus613 99.35
COG0277459 GlcD FAD/FMN-containing dehydrogenases [Energy pro 99.22
KOG1231|consensus505 98.7
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 97.88
PRK11282352 glcE glycolate oxidase FAD binding subunit; Provis 95.6
PF09330291 Lact-deh-memb: D-lactate dehydrogenase, membrane b 94.2
PRK11183564 D-lactate dehydrogenase; Provisional 93.11
PLN00107257 FAD-dependent oxidoreductase; Provisional 91.03
TIGR01679419 bact_FAD_ox FAD-linked oxidoreductase. This model 90.58
PF04030259 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: I 90.57
PRK11183564 D-lactate dehydrogenase; Provisional 89.67
PF09265281 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and c 85.51
PF09330291 Lact-deh-memb: D-lactate dehydrogenase, membrane b 82.54
PF0803147 BBE: Berberine and berberine like ; InterPro: IPR0 81.7
>KOG1233|consensus Back     alignment and domain information 
Probab=100.00  E-value=9.9e-47  Score=366.32  Aligned_cols=247  Identities=57%  Similarity=1.057  Sum_probs=228.2

Q ss_pred             cccCCCccEEEeecHHHHHhhhccCCCC-CccccccchhhhhhhhhccCCCCCCceEEEEEEEcCHHHHHHHHHHHHHHH
Q psy4129           4 MVQRCQPSSIRLMDNAQFKFGQSLRPVP-GYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIA   82 (355)
Q Consensus         4 ~~~g~~p~~~el~D~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~~~v~~~~~~i~~i~   82 (355)
                      ..++|+|+++|||||.|+.+++++++.. +..+.++|.+|+.|+|++|||+.++-|..++.|||+.++|+++.+++.+|+
T Consensus       364 A~qRCqPAS~RLMDN~QF~fGqALKp~~~Swwas~~d~~kk~YiTswKGfd~nqicaATllfEGdre~V~qhE~~~y~iA  443 (613)
T KOG1233|consen  364 AIQRCQPASLRLMDNDQFVFGQALKPASDSWWASLKDSVKKMYITSWKGFDVNQICAATLLFEGDREEVDQHEERLYKIA  443 (613)
T ss_pred             HHHhcCchheeeecccceecccccCcchhhHHHHHHHHHhhheeecccCcCHhhhhhhhheecccHHHHHHHHHHHHHHH
Confidence            3578999999999999999999999886 788899999999999999999999999999999999999999999999999


Q ss_pred             HHcCCCCCchhHhHhHHHhhhhHHHHHHhhcccCceeeeeeeeeecchHHHHHHHHHHHHHHHHHhcCCccceeE-eEee
Q psy4129          83 LKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLIS-CRVT  161 (355)
Q Consensus        83 ~~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~t~D~aVP~s~l~~~~~~v~~~~~~~~~~~~~~~~~~~-~h~g  161 (355)
                      ++++|...+.+++++.|.+.|+++|+|++.+.++++.+++||+|||++...+++.+++++.+||++.|+..+.+. |+++
T Consensus       444 ekF~G~~aG~~NGqrGY~LTfvIAYiRDlgl~~gvlgESFETSvPWDrv~~LCRnVKer~~rEck~~gv~~~~~s~CRVT  523 (613)
T KOG1233|consen  444 EKFHGVVAGAENGQRGYRLTFVIAYIRDLGLNHGVLGESFETSVPWDRVLSLCRNVKERMKRECKAQGVTHPVLSNCRVT  523 (613)
T ss_pred             HHhCCccccccccccceEEEEeHHHHHhhcccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHhcCCCcccccceeEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999875555 9999


Q ss_pred             eecCCCceeeeeeeeccCCCCCCCCcchhhhhHHHHHHHHHhhhhhhhhhhhcccccccCCceeeEeeecccCCCCCccc
Q psy4129         162 QTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIG  241 (355)
Q Consensus       162 h~yd~G~~~y~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~~~h~sh~y~~G~~l~~~~~~~~~~~~~~~~  241 (355)
                      ++||+|+||||||+||..|.+||+.-|+-||+.+|||                                           
T Consensus       524 QtYDAGACiYFYFgFn~rg~~dplevfe~iE~aARdE-------------------------------------------  560 (613)
T KOG1233|consen  524 QTYDAGACIYFYFGFNARGLKDPLEVFERIETAARDE-------------------------------------------  560 (613)
T ss_pred             EEecCceEEEEEEeeccccCCchHHHHHHHHHHhHHH-------------------------------------------
Confidence            9999999999999999998777766666666665554                                           


Q ss_pred             hHHHHHHHHHHHHHHcCCeeEEecccCccccccccccCChhHHHHHHHHHhhcCCCccccCCCc
Q psy4129         242 SYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGS  305 (355)
Q Consensus       242 ~~~~~~~~v~~~~~~~GGtisghHGvG~~h~~~l~~~~g~~~~~~mr~iK~a~DP~~IlNpGg~  305 (355)
                                  ++..||++|||||||..++.||....++.++.+++++|..+||+||+..+.+
T Consensus       561 ------------IlacGGSlSHHHGVGKiRkqW~~~~~~~vG~~llka~K~~lDP~NIFa~~NL  612 (613)
T KOG1233|consen  561 ------------ILACGGSLSHHHGVGKIRKQWMLTTNGAVGIALLKAIKSELDPANIFASANL  612 (613)
T ss_pred             ------------HHhcCCcccccccchHHHHHHHHhhhhhHhHHHHHHHHHhcChhhhcccccc
Confidence                        4678999999999999999999999999999999999999999999887654

>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>PLN02805 D-lactate dehydrogenase [cytochrome] Back     alignment and domain information
>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage Back     alignment and domain information
>TIGR00387 glcD glycolate oxidase, subunit GlcD Back     alignment and domain information
>PRK11230 glycolate oxidase subunit GlcD; Provisional Back     alignment and domain information
>KOG1232|consensus Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>KOG1232|consensus Back     alignment and domain information
>KOG1231|consensus Back     alignment and domain information
>KOG1233|consensus Back     alignment and domain information
>COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] Back     alignment and domain information
>KOG1231|consensus Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional Back     alignment and domain information
>PF09330 Lact-deh-memb: D-lactate dehydrogenase, membrane binding; InterPro: IPR015409 Members of this entry are predominantly found in prokaryotic D-lactate dehydrogenase, forming the cap-membrane-binding domain, which consists of a large seven-stranded antiparallel beta-sheet flanked on both sides by alpha-helices Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PLN00107 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>TIGR01679 bact_FAD_ox FAD-linked oxidoreductase Back     alignment and domain information
>PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1 Back     alignment and domain information
>PRK11183 D-lactate dehydrogenase; Provisional Back     alignment and domain information
>PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold Back     alignment and domain information
>PF09330 Lact-deh-memb: D-lactate dehydrogenase, membrane binding; InterPro: IPR015409 Members of this entry are predominantly found in prokaryotic D-lactate dehydrogenase, forming the cap-membrane-binding domain, which consists of a large seven-stranded antiparallel beta-sheet flanked on both sides by alpha-helices Back     alignment and domain information
>PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
4bby_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 5e-66
4bby_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 2e-27
4bca_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 1e-65
4bca_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 5e-27
4bc7_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 3e-65
4bc7_A658 Mammalian Alkyldihydroxyacetonephosphate Synthase: 2e-27
2uuu_A584 Alkyldihydroxyacetonephosphate Synthase In P212121 4e-15
2uuu_A584 Alkyldihydroxyacetonephosphate Synthase In P212121 1e-04
>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658 Back     alignment and structure 
Iteration: 1

 Score =  248 bits (632), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 116/206 (56%), Positives = 152/206 (73%), Gaps = 2/206 (0%)
Query: 6   QRCQPSSIRLMDNAQFKFGQSLRP-VPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLF 64
           QRC P+SIRLMDN QF+FG +L+P V   F   LDGLK+ YITK KGF  +++ V TLLF
Sbjct: 411 QRCAPASIRLMDNQQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLF 470
Query: 65  EGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFET 124
           EGD E V +++ ++Y IA KFGG+ AGE NG RGY+LT+VIAY+RDL L+Y+I+ ESFET
Sbjct: 471 EGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFET 530
Query: 125 SVPWDKAILLCTNVKQRVARECKVMNVEH-YLISCRVTQTYDAGCCIYFYFGYNFMGQKD 183
           S PWD+ + LC NVK+R+ RECK   V+   L +CRVTQTYDAG CIYFYF +N+ G  D
Sbjct: 531 SAPWDRVVDLCRNVKERIRRECKEKGVQFPPLSTCRVTQTYDAGACIYFYFAFNYRGISD 590
Query: 184 PIGSYDYIEHCARDEIIACVMNVEHY 209
           P+  ++  E  AR+EI+A   ++ H+
Sbjct: 591 PLAVFEQTEAAAREEILANGGSLSHH 616
>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658 Back     alignment and structure
>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658 Back     alignment and structure
>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658 Back     alignment and structure
>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658 Back     alignment and structure
>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658 Back     alignment and structure
>pdb|2UUU|A Chain A, Alkyldihydroxyacetonephosphate Synthase In P212121 Length = 584 Back     alignment and structure
>pdb|2UUU|A Chain A, Alkyldihydroxyacetonephosphate Synthase In P212121 Length = 584 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query355
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 2e-61
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 3e-06
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 4e-06
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 Back     alignment and structure
 Score =  205 bits (523), Expect = 2e-61
 Identities = 60/300 (20%), Positives = 105/300 (35%), Gaps = 57/300 (19%)

Query: 4   MVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLL 63
                 P+ IR+ D  + +   + +P  G        + + Y+  I+ F    +C++ + 
Sbjct: 339 RSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIG 398

Query: 64  FEGDPEDVKKNQAKIYSIALKFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFE 123
           FEG  + V  ++  ++ I  K      G   G       + + YIRD  LD+++  +  E
Sbjct: 399 FEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAE 458

Query: 124 TSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKD 183
           T+V +     L  + KQ                                           
Sbjct: 459 TTVSYANLQTLWKDAKQTFV---------------------------------------- 478

Query: 184 PIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSY 243
                   +H     I A +           ++ TY  G C+YF F      +   +  Y
Sbjct: 479 --------KHFKDQGIPAWIC--------AHISHTYTNGVCLYFIFASK-QNENKDMAQY 521

Query: 244 DYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANG 303
              +    D I   GGS+SHHHGVG     W  +  +   + +Y+S K  +DPK++    
Sbjct: 522 IEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPR 581
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 100.0
4bby_A658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 100.0
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 99.97
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 99.9
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 99.85
3pm9_A476 Putative oxidoreductase; putative D-2-hydroxygluta 99.85
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 99.82
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 99.73
2uuu_A584 Alkyldihydroxyacetonephosphate synthase; transfera 99.67
4bby_A658 Alkyldihydroxyacetonephosphate synthase, peroxiso; 99.64
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 99.47
1wvf_A520 4-cresol dehydrogenase [hydroxylating] flavoprote 99.47
1f0x_A571 DLDH, D-lactate dehydrogenase; oxidoreductase; HET 99.31
1e8g_A560 Vanillyl-alcohol oxidase; oxidoreductase, flavoenz 97.98
2exr_A524 Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin 97.77
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 97.65
1w1o_A534 Cytokinin dehydrogenase 1; flavin, oxidoreductase, 96.99
2vfr_A422 Xylitol oxidase, alditol oxidase; FAD, sugar, poly 95.84
4feh_A481 Oxidoreductase DPRE1; alpha+beta, decaprenylphosph 86.46
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
Probab=100.00  E-value=5.3e-39  Score=334.61  Aligned_cols=246  Identities=24%  Similarity=0.446  Sum_probs=185.8

Q ss_pred             cccCCCccEEEeecHHHHHhhhccCCCCCccccccchhhhhhhhhccCCCCCCceEEEEEEEcCHHHHHHHHHHHHHHHH
Q psy4129           4 MVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIAL   83 (355)
Q Consensus         4 ~~~g~~p~~~el~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~~~v~~~~~~i~~i~~   83 (355)
                      +++|+.|+++||||+.++++.....+..+...++++++++.|+.++++++.+..|+|+++|+|++++++++.+.+.++|+
T Consensus       339 ~~~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llve~~g~~~~v~~~~~~~~~~~~  418 (584)
T 2uuu_A          339 RSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFKNVCLSIIGFEGPKKVVDFHRTSVFDILS  418 (584)
T ss_dssp             HHHTCCCSEEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTTTCEEEEEEEEECHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCceEEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCCccEEEEEEEecChHHHHHHHHHHHHHHH
Confidence            45799999999999999886554333333344444555455764445776567799999999999999999999999999


Q ss_pred             HcCCCCCchhHhHhHHHhhhhHHHHHHhhcccCceeeeeeeeeecchHHHHHHHHHHHHHHHHHhcCCccceeEeEeeee
Q psy4129          84 KFGGIPAGETNGMRGYMLTFVIAYIRDLALDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQT  163 (355)
Q Consensus        84 ~~g~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~t~D~aVP~s~l~~~~~~v~~~~~~~~~~~~~~~~~~~~h~gh~  163 (355)
                      ++|+..++++..+.|+.+|+..|++++..+..+...+++||+||||+++++++++++.+.++++++|++ +.++||+||+
T Consensus       419 ~~g~~~~~~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~~~l~~~~~~~g~~-~~~~~h~gH~  497 (584)
T 2uuu_A          419 KNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIP-AWICAHISHT  497 (584)
T ss_dssp             TTTCEEEEEESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHTTTCC-EEEEEEEEEE
T ss_pred             HCCCccchHHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHHHHHHHHHHhHHHhcCCe-eEEEEEEEee
Confidence            999876655444555555568899998876777677889999999999999999999988888899988 4788999999


Q ss_pred             cCCCceeeeeeeeccCCCCCCCCcchhhhhHHHHHHHHHhhhhhhhhhhhcccccccCCceeeEeeecccCCCCCccchH
Q psy4129         164 YDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSY  243 (355)
Q Consensus       164 yd~G~~~y~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~~~h~sh~y~~G~~l~~~~~~~~~~~~~~~~~~  243 (355)
                      ||+|+|+|+++.+++.                                                        .+++.+++
T Consensus       498 gd~G~~~~~~~~~~~~--------------------------------------------------------~~~~~~~~  521 (584)
T 2uuu_A          498 YTNGVCLYFIFASKQN--------------------------------------------------------ENKDMAQY  521 (584)
T ss_dssp             ETTEEEEEEEEEEECC--------------------------------------------------------TTCCTHHH
T ss_pred             cCCCcEEEEEeccCCC--------------------------------------------------------ChhhHHHH
Confidence            9999888877765532                                                        24556788


Q ss_pred             HHHHHHHHHHHHHcCCeeEEecccCccccccccccCChhHHHHHHHHHhhcCCCccccCCCcc
Q psy4129         244 DYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGSI  306 (355)
Q Consensus       244 ~~~~~~v~~~~~~~GGtisghHGvG~~h~~~l~~~~g~~~~~~mr~iK~a~DP~~IlNpGg~i  306 (355)
                      +++.+.+++.++++|||+|||||||..|++||..++++..+++|++||++|||++||||||+|
T Consensus       522 ~~~~~~~~~~v~~~gGsiS~EHGiG~~k~~~l~~~~g~~~~~lmr~iK~a~DP~gIlNPGki~  584 (584)
T 2uuu_A          522 IEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRYATRGWINVYRSLKETIDPKDICNPRKLI  584 (584)
T ss_dssp             HHHHHHHHHHHHHTTCCCC------------------CTHHHHHHHHHHHHCTTCCBSCCCC-
T ss_pred             HHHHHHHHHHHHHcCCcEEecccCCcccHHHHHHhcCHHHHHHHHHHHHHcCCCcCCCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999985
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Back     alignment and structure
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* Back     alignment and structure
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Back     alignment and structure
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 Back     alignment and structure
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Back     alignment and structure
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Back     alignment and structure
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Back     alignment and structure
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 355
d1wvfa1279 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cr 1e-15
d1wvfa1279 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cr 5e-08
d1e8ga1287 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fu 4e-14
d1e8ga1287 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fu 1e-10
d1f0xa1294 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Esc 8e-04
d1f0xa1294 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Esc 0.001
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Length = 279 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]

 Score = 74.0 bits (181), Expect = 1e-15
 Identities = 33/308 (10%), Positives = 61/308 (19%), Gaps = 73/308 (23%)

Query: 4   MVQRCQPSSIRLMDNAQFKFGQSLRPVPGYFGLLLDGLKRIYITKIKGFSVDEMCVTTLL 63
            +    P+S+ +           L                  I +++  +          
Sbjct: 27  RMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEP--GHTPDSVIKQMQKDTGMGAWNLYAA 84

Query: 64  FEGDPEDVKKNQAKIYSIALKFGGI-------PAGETNGMRGYMLTFVIAYIRDLALDYH 116
             G  E V  N   +  +  K G                     L   +  +++  L   
Sbjct: 85  LYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNW 144

Query: 117 ILAESFETSVPWDKAILLCTNVKQRVARECKVMNVEHYLISCRVTQTYDAGCCIYFYFG- 175
                     P                        +   ++ RV   Y       F    
Sbjct: 145 RGGGGSMWFAPV-------------SEARGSEC-KKQAAMAKRVLHKYGLDYVAEFIVAP 190

Query: 176 YNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFGYNFMG 235
            +                              H++I                        
Sbjct: 191 RDM-----------------------------HHVIDV-----------------LYDRT 204

Query: 236 QKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLD 295
             +     D   +   DE    G      + V         +    V  +L  + KR +D
Sbjct: 205 NPEETKRADACFNELLDEFEKEGY---AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVD 261

Query: 296 PKNVFANG 303
           P N+ A G
Sbjct: 262 PNNILAPG 269
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Length = 279 Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Length = 287 Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Length = 287 Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 294 Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 294 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query355
d1wvfa1279 Flavoprotein subunit of p-cresol methylhydroxylase 99.95
d1e8ga1287 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 99.93
d1f0xa1294 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.78
d1e8ga1287 Vanillyl-alcohol oxidase {Fungus (Penicillium simp 99.74
d1wvfa1279 Flavoprotein subunit of p-cresol methylhydroxylase 99.67
d1f0xa1294 D-lactate dehydrogenase {Escherichia coli [TaxId: 99.65
d1w1oa1289 Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId 96.16
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]

Probab=99.95  E-value=1.7e-27  Score=223.11  Aligned_cols=230  Identities=13%  Similarity=0.013  Sum_probs=161.4

Q ss_pred             ccCCCccEEEeecHHHHHhhhccCCCCC--ccccccchhhhhhhhhccCCCCCCceEEEEEEEcCHHHHHHHHHHHHHHH
Q psy4129           5 VQRCQPSSIRLMDNAQFKFGQSLRPVPG--YFGLLLDGLKRIYITKIKGFSVDEMCVTTLLFEGDPEDVKKNQAKIYSIA   82 (355)
Q Consensus         5 ~~g~~p~~~el~D~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~G~~~~v~~~~~~i~~i~   82 (355)
                      ++|++|+++|+||+.++.+.+...+..-  ..+-+.......+... .+   ...+.++++++|++++|+.+.+.+++++
T Consensus        28 ~~gi~p~~~e~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~-~~---~~~w~l~~~l~G~~~~v~~~~~~i~~i~  103 (279)
T d1wvfa1          28 MSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKD-TG---MGAWNLYAALYGTQEQVDVNWKIVTDVF  103 (279)
T ss_dssp             HTTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHH-HC---CCSEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred             HcCCCcceeEecCHHHHHHHHhccccccccCCCCCCHHHHHHHHHH-hC---CCceeEEEEeecCHHHHHHHHHHHHHHH
Confidence            5899999999999999987554332210  0000111111112211 12   2457999999999999999999999999


Q ss_pred             HHcCCCCC----chhHhHhHHHhhhhH---HHHHHhh-----cccCceeeeeeeeeecchHHHHHHHHHHHHHHHHHhcC
Q psy4129          83 LKFGGIPA----GETNGMRGYMLTFVI---AYIRDLA-----LDYHILAESFETSVPWDKAILLCTNVKQRVARECKVMN  150 (355)
Q Consensus        83 ~~~g~~~~----~~~~~~~~~~~R~~~---~~~~~~~-----~~~~~~~~t~D~aVP~s~l~~~~~~v~~~~~~~~~~~~  150 (355)
                      +++|+..+    +.+..+.||.+|...   |.+..+.     ...+...++.++++|+|+++++++.+++.++    ++|
T Consensus       104 ~~~~~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~s~l~~~~~~~~~~~~----~~g  179 (279)
T d1wvfa1         104 KKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLH----KYG  179 (279)
T ss_dssp             HHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHHHHHHHHHHHHHHHH----HTT
T ss_pred             HHCCCceEEeCCCHHHHHHHHHHHHhhhhhhhhhhhhHhhcCCCCCcceeeeeecCCHHHHHHHHHHHHHHHH----HhC
Confidence            99998775    223345677777432   3322221     1223445566788888999999999988664    789


Q ss_pred             CccceeEeEeeeecCCCceeeeeeeeccCCCCCCCCcchhhhhHHHHHHHHHhhhhhhhhhhhcccccccCCceeeEeee
Q psy4129         151 VEHYLISCRVTQTYDAGCCIYFYFGYNFMGQKDPIGSYDYIEHCARDEIIACVMNVEHYLISCRVTQTYDAGCCIYFYFG  230 (355)
Q Consensus       151 ~~~~~~~~h~gh~yd~G~~~y~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~n~~~~~~~~h~sh~y~~G~~l~~~~~  230 (355)
                      ++. .+++|+|   | | |+++++.+.++                                                   
T Consensus       180 ~~~-~~~~H~g---d-g-nlh~~v~~~~~---------------------------------------------------  202 (279)
T d1wvfa1         180 LDY-VAEFIVA---P-R-DMHHVIDVLYD---------------------------------------------------  202 (279)
T ss_dssp             CCC-CEEEEEC---S-S-EEEEEEEEEEE---------------------------------------------------
T ss_pred             CCe-EEEEecC---C-c-eEEEEeecccC---------------------------------------------------
Confidence            873 5555554   4 4 34333322221                                                   


Q ss_pred             cccCCCCCccchHHHHHHHHHHHHHHcCCeeEEecccCccccccccccCChhHHHHHHHHHhhcCCCccccCCCc
Q psy4129         231 YNFMGQKDPIGSYDYIEHCARDEIIACGGSISHHHGVGKLRSHWYPKQVSSVGVELYQSTKRQLDPKNVFANGGS  305 (355)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~v~~~~~~~GGtisghHGvG~~h~~~l~~~~g~~~~~~mr~iK~a~DP~~IlNpGg~  305 (355)
                        . ++++..+++.++.+++.+.++++||   +|||||..|.+||..++++..+++|++||++|||++||||||.
T Consensus       203 --~-~~~~~~~~~~~~~~~l~~~~~~~Gg---~eHGiG~~~~~~l~~~~g~~~~~lm~~iK~alDP~~IlNPGK~  271 (279)
T d1wvfa1         203 --R-TNPEETKRADACFNELLDEFEKEGY---AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRS  271 (279)
T ss_dssp             --T-TCHHHHHHHHHHHHHHHHHHHHTTC---CBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred             --C-CCHHHHHHHHHHHHHHHHHHHHhCC---CCCCCcHHHHHHHHHHhCHHHHHHHHHHHHHhCCCcCCCCCCC
Confidence              1 2344566788888999999999999   7999999999999999999999999999999999999999986
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} Back     information, alignment and structure
>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure