Psyllid ID: psy4278

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
Protein Sequence
MKPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHLEIEDRRKTG
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccEEEEEHHHHHHHHHHHHHccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccccccccccccccEEEccccccccccccEEEEccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHcHccccHHHHHHHHHHHHHHHHHHHHHcHHHccccccHHccccccEEEEcHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHcccccccEEEEcccEEEccccEEEEEEcccccEEEEHcccccc
Coil and Loop (DISEMBL)
mkppksdlwFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRlpnvlqcgipllkahsnhsitLSQLQIASLLANAFLctyprrnsnqpesqyanfpcinfsrLFQAQSSCVSEKLKCLINYFVRVttkdptglvtysrrylphsqlphwgdsrrklpdlfissegmieNQRGLLQvdfankshhlEIEDRRKTG
Flexible Loop (DISEMBL)
mkppksdlwfIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRvttkdptglvtYSRRylphsqlphwgdsrRKLPDLFISSEGMIENQRGLlqvdfankshhleiedrrktg
Low Complexity Region (SEG)
MKPPKSDLWFIDVKqllqfqeldqleTDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHLEIEDRRKTG
Disordered region (IsUnstruct)
*******LWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPR********QYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDF****************
Disordered Region (DISOPRED)
***PKSD*WFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSN*SITLSQLQIASLLANAFLCTYPRR*********ANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHLEIED*****
Disordered Region (DISEMBL)
MKPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHL*********
Disordered Region (DISPRO)
*KPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHLEIEDR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQRGLLQVDFANKSHHLEIEDRRKTG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	197	2.2.26 [Sep-21-2011]
O46043	768	Poly(ADP-ribose) glycohyd	yes	N/A	0.898	0.230	0.526	4e-43
O88622	969	Poly(ADP-ribose) glycohyd	yes	N/A	0.862	0.175	0.494	3e-39
Q9QYM2	972	Poly(ADP-ribose) glycohyd	yes	N/A	0.862	0.174	0.494	4e-39
Q86W56	976	Poly(ADP-ribose) glycohyd	yes	N/A	0.862	0.174	0.494	6e-39
O02776	977	Poly(ADP-ribose) glycohyd	yes	N/A	0.862	0.174	0.494	9e-39
Q9SKB3	548	Poly(ADP-ribose) glycohyd	yes	N/A	0.817	0.293	0.306	2e-15
Q8VYA1	522	Probable poly(ADP-ribose)	no	N/A	0.812	0.306	0.316	2e-15
Q867X0	781	Poly(ADP-ribose) glycohyd	no	N/A	0.548	0.138	0.306	2e-06
Q9N5L4	485	Poly(ADP-ribose) glycohyd	no	N/A	0.548	0.222	0.304	3e-06

>sp|O46043|PARG_DROME Poly(ADP-ribose) glycohydrolase OS=Drosophila melanogaster GN=Parg PE=1 SV=2

 Score =  174 bits (440), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/188 (52%), Positives = 131/188 (69%), Gaps = 11/188 (5%)

Query: 7   DLW-FIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSIT 65
           D W F  + QLL  +ELD+ ET +FF+ LLP+II LALRLP+++Q  +PLLK H N S++
Sbjct: 185 DQWHFRALHQLLD-EELDESETRVFFEDLLPRIIRLALRLPDLIQSPVPLLKHHKNASLS 243

Query: 66  LSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYF 125
           LSQ QI+ LLANAFLCT+PRRN+ + +S+Y+ FP INF+RL+Q+    V EKLKC+++YF
Sbjct: 244 LSQQQISCLLANAFLCTFPRRNTLKRKSEYSTFPDINFNRLYQSTGPAVLEKLKCIMHYF 303

Query: 126 VRV--TTKD----PTGLVTYSRRYLPHSQLPHWGDSRRKLPD--LFISSEGMIENQR-GL 176
            RV  T +D    PTG+VT+ RR      L  W  S   L D  L + +EG IE++  GL
Sbjct: 304 RRVCPTERDASNVPTGVVTFVRRSGLPEHLIDWSQSAAPLGDVPLHVDAEGTIEDEGIGL 363

Query: 177 LQVDFANK 184
           LQVDFANK
Sbjct: 364 LQVDFANK 371

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism is required for maintenance of the normal function of neuronal cells.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1EC: 4EC: 3

>sp|O88622|PARG_MOUSE Poly(ADP-ribose) glycohydrolase OS=Mus musculus GN=Parg PE=1 SV=2

 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 6/176 (3%)

Query: 12  DVKQLLQFQE--LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQL 69
           D   L+ F +  L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ 
Sbjct: 562 DFTALVDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQE 621

Query: 70  QIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVT 129
           QIASLLANAF CT+PRRN+   +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT
Sbjct: 622 QIASLLANAFFCTFPRRNAKM-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVT 680

Query: 130 TKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
            K PTGLVT++R+ L     P W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct: 681 EKKPTGLVTFTRQSL--EDFPEWERCEKPLTRLHVTYEGTIEGNGRGMLQVDFANR 734

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q9QYM2|PARG_RAT Poly(ADP-ribose) glycohydrolase OS=Rattus norvegicus GN=Parg PE=1 SV=1

 Score =  160 bits (406), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 6/176 (3%)

Query: 12  DVKQLLQFQE--LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQL 69
           D   L+ F +  L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ 
Sbjct: 565 DFTALVDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQE 624

Query: 70  QIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVT 129
           QIASLLANAF CT+PRRN+   +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT
Sbjct: 625 QIASLLANAFFCTFPRRNAKM-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVT 683

Query: 130 TKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
            K PTGLVT++R+ L     P W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct: 684 EKKPTGLVTFTRQSL--EDFPEWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 737

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q86W56|PARG_HUMAN Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1

 Score =  160 bits (404), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 6/176 (3%)

Query: 12  DVKQLLQFQE--LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQL 69
           D   L+ F +  L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ 
Sbjct: 569 DFTALIDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQE 628

Query: 70  QIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVT 129
           QIASLLANAF CT+PRRN+   +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT
Sbjct: 629 QIASLLANAFFCTFPRRNAKM-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVT 687

Query: 130 TKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMI-ENQRGLLQVDFANK 184
            K PTGLVT++R+ L     P W    + L  L ++ EG I EN +G+LQVDFAN+
Sbjct: 688 EKKPTGLVTFTRQSL--EDFPEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 741

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|O02776|PARG_BOVIN Poly(ADP-ribose) glycohydrolase OS=Bos taurus GN=PARG PE=1 SV=1

 Score =  159 bits (403), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 118/176 (67%), Gaps = 6/176 (3%)

Query: 12  DVKQLLQFQE--LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQL 69
           D   L+ F +  L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ 
Sbjct: 570 DFTALIDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQE 629

Query: 70  QIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVT 129
           QIASLLANAF CT+PRRN+   +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT
Sbjct: 630 QIASLLANAFFCTFPRRNAKM-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVT 688

Query: 130 TKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
            K PTGLVT++R+ L     P W    + L  L ++ EG IE N +G+LQVDFAN+
Sbjct: 689 EKKPTGLVTFTRQSL--EDFPEWERCEKLLTRLHVTYEGTIEGNGQGMLQVDFANR 742

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q9SKB3|PARG1_ARATH Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana GN=PARG1 PE=1 SV=2

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 25/186 (13%)

Query: 19  FQEL-DQLETDIFFKQLLPKIISLALRLPNVLQC--------------GIPLLKAHSNHS 63
           F EL D+ E+  +F +++P + SL L+ P++L+               G+ LL +     
Sbjct: 79  FDELIDEKESKRWFDEIIPALASLLLQFPSLLEVHFQNADNIVSGIKTGLRLLNSQQAGI 138

Query: 64  ITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQA----QSSCVSEKLK 119
           + LSQ  I +LLA +F C +P  N         + P INF  LF +     S     K++
Sbjct: 139 VFLSQELIGALLACSFFCLFPDDNRGA-----KHLPVINFDHLFASLYISYSQSQESKIR 193

Query: 120 CLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQ 178
           C+++YF R  +  P G+V++ R+         W  S   L    + S G+IE+Q    L+
Sbjct: 194 CIMHYFERFCSCVPIGIVSFERKITAAPDADFWSKSDVSLCAFKVHSFGLIEDQPDNALE 253

Query: 179 VDFANK 184
           VDFANK
Sbjct: 254 VDFANK 259

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase (By similarity). Involved in establishing period length of the circadian oscillator. May regulate post-translational poly(ADP-ribosyl)ation of an oscillator component.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q8VYA1|PARG2_ARATH Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana GN=PARG2 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 33/193 (17%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQ--------------CGIPLLKAHSNHSIT 65
           +++ + E+  FF +++P +  L L+LP++L+               G+ LL       + 
Sbjct: 83  KKISREESANFFGEVVPALCRLLLQLPSMLEKHYQKADHVLDGVKSGLRLLGPQEAGIVL 142

Query: 66  LSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQ--AQSSCVSE--KLKCL 121
           LSQ  IA+LLA +F C +P     + +    N   INFS LF       C  +  K+KCL
Sbjct: 143 LSQELIAALLACSFFCLFP-----EVDRSLKNLQGINFSGLFSFPYMRHCTKQENKIKCL 197

Query: 122 INYFVRVTTKDPTGLVTYSRRYLPHSQLPH---------WGDSRRKLPDLFISSEGMIEN 172
           I+YF R+    PTG V++ R+ LP    PH         W +S   L  + I + G IE+
Sbjct: 198 IHYFGRICRWMPTGFVSFERKILPLEYHPHFVSYPKADSWANSVTPLCSIEIHTSGAIED 257

Query: 173 QR-GLLQVDFANK 184
           Q    L+VDFA++
Sbjct: 258 QPCEALEVDFADE 270

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q867X0|PME3_CAEEL Poly(ADP-ribose) glycohydrolase pme-3 OS=Caenorhabditis elegans GN=pme-3 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 16/124 (12%)

Query: 63  SITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLI 122
           S TLS  Q A+L+A  F          +P+S ++      F R+  +  S   EKLK L 
Sbjct: 431 SATLSHKQCAALVARMFFA--------RPDSPFS------FCRILSSDKSICVEKLKFLF 476

Query: 123 NYFVRVTTKDPTGLVTYSRRYLPHSQL-PHWGDSR-RKLPDLFISSEGMIENQRGLLQVD 180
            YF +++   P G V++    +        W D + R LP++    E +IE+     QVD
Sbjct: 477 TYFDKMSMDPPDGAVSFRLTKMDKDTFNEEWKDKKLRSLPEVEFFDEMLIEDTALCTQVD 536

Query: 181 FANK 184
           FAN+
Sbjct: 537 FANE 540

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

>sp|Q9N5L4|PME4_CAEEL Poly(ADP-ribose) glycohydrolase pme-4 OS=Caenorhabditis elegans GN=pme-4 PE=2 SV=2

 Score = 52.0 bits (123), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 17/125 (13%)

Query: 62  HSITLSQLQIASLLANAFLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCL 121
            S T S +Q ASL+A  F    PR               ++F  + Q  +    EKLK L
Sbjct: 148 ESATFSHIQCASLIAWMFFSDTPR---------------LSFIIILQKTTCVAVEKLKFL 192

Query: 122 INYFVRVTTKDPTGLVTYSRRYLPHSQ-LPHWG-DSRRKLPDLFISSEGMIENQRGLLQV 179
             YF +++   P G V++ +  + H Q L +W       LPD+ +  +  IE      Q+
Sbjct: 193 FTYFDKMSIDPPIGAVSFRKMRITHKQYLENWKLRETNLLPDVQVFDKMSIEETALCTQI 252

Query: 180 DFANK 184
           DFANK
Sbjct: 253 DFANK 257

Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism may be required for maintenance of the normal function of neuronal cells.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 1

EC: 4

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
332020816	776	Poly(ADP-ribose) glycohydrolase [Acromyr	0.827	0.210	0.581	9e-49
307206622	813	Poly(ADP-ribose) glycohydrolase [Harpegn	0.827	0.200	0.573	4e-48
307166037	4046	WD repeat and FYVE domain-containing pro	0.827	0.040	0.575	6e-46
170048618	718	poly(adp-ribose) glycohydrolase [Culex q	0.837	0.229	0.576	1e-45
328778420	4136	PREDICTED: WD repeat and FYVE domain-con	0.827	0.039	0.534	2e-43
380014506	4216	PREDICTED: LOW QUALITY PROTEIN: WD repea	0.827	0.038	0.534	2e-43
383859858	4136	PREDICTED: WD repeat and FYVE domain-con	0.827	0.039	0.523	4e-43
156550659	773	PREDICTED: poly(ADP-ribose) glycohydrola	0.827	0.210	0.526	5e-43
350416594	4139	PREDICTED: LOW QUALITY PROTEIN: WD repea	0.827	0.039	0.523	3e-42
346472827	686	hypothetical protein [Amblyomma maculatu	0.827	0.237	0.529	3e-42

>gi|332020816|gb|EGI61214.1| Poly(ADP-ribose) glycohydrolase [Acromyrmex echinatior]

 Score =  198 bits (504), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 100/172 (58%), Positives = 127/172 (73%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           +D  ET +FF+ L+PKI+ LAL+LP +L   +PLLK HSN SI+LSQLQ+ASLLANAF C
Sbjct: 183 MDSEETTMFFEVLMPKIVQLALQLPVLLTGAVPLLKRHSNDSISLSQLQVASLLANAFFC 242

Query: 82  TYPRRNSNQPESQYANFPCINFSRLF------QAQSSC--VSEKLKCLINYFVRVTTKDP 133
           T+PRRNSN P+S+YA +P INF+RLF      Q+ S C  V EK+KCL++YF RVTTK P
Sbjct: 243 TFPRRNSNNPQSEYATYPYINFNRLFAAFNEKQSASRCESVMEKIKCLLHYFRRVTTKAP 302

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G++T  RRY+P    P W    +KLP L I+S+G IE++  GLLQVDFANK
Sbjct: 303 EGIITIERRYIPLENCPRWNLQEQKLPPLHITSKGTIESEGAGLLQVDFANK 354

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206622|gb|EFN84601.1| Poly(ADP-ribose) glycohydrolase [Harpegnathos saltator]

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 98/171 (57%), Positives = 126/171 (73%), Gaps = 8/171 (4%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           LD+ ET IFF+ L+PKI+ LAL+LP +L   +PLLK H+N  I+LSQLQ+ASLLANAF C
Sbjct: 182 LDEEETTIFFETLMPKIVQLALQLPMLLTGAVPLLKRHTNGCISLSQLQVASLLANAFFC 241

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQAQS-------SCVSEKLKCLINYFVRVTTKDPT 134
           T+PRRNS+ P+S+YA++P INF+RLF A S       + V EK+KCL +YF RVT+K P 
Sbjct: 242 TFPRRNSSNPQSEYASYPHINFNRLFAAYSEERHNRCTAVMEKIKCLFHYFRRVTSKAPE 301

Query: 135 GLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
           G++T  RRY+P    P W    +KLP L I+S+G IEN+  GLLQVDFANK
Sbjct: 302 GIITIERRYIPLEDCPKWQSLDKKLPVLHITSKGTIENEGAGLLQVDFANK 352

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307166037|gb|EFN60314.1| WD repeat and FYVE domain-containing protein 3 [Camponotus floridanus]

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 99/172 (57%), Positives = 122/172 (70%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           LD  ET +FFK L+PKII LAL+LP +L   IPLLK H+N  I+LSQLQ+ASLLANAF C
Sbjct: 186 LDPEETAVFFKTLMPKIIQLALQLPMLLTGAIPLLKRHTNGFISLSQLQVASLLANAFFC 245

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQA-------QSSCVSEKLKCLINYFVRVTTK-DP 133
           T+PRRNS+ P+S+YA +P INF+RLF A       Q   V EK+KCL++YF RVT K  P
Sbjct: 246 TFPRRNSSNPQSEYATYPYINFNRLFAAYSEEKHNQCESVMEKIKCLLHYFRRVTAKVAP 305

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G++T  RRY+P    P W    +KL  L I+S+G IEN+  GLLQVDFANK
Sbjct: 306 EGVITIERRYIPRENCPKWNLQNQKLSSLHITSKGTIENEGAGLLQVDFANK 357

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170048618|ref|XP_001853435.1| poly(adp-ribose) glycohydrolase [Culex quinquefasciatus] gi|167870664|gb|EDS34047.1| poly(adp-ribose) glycohydrolase [Culex quinquefasciatus]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 122/170 (71%), Gaps = 5/170 (2%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAF 79
           +ELD+ E+D FFK  LPK+I LAL LP ++   IPLLK  SN SI+LSQ Q+ASLLANAF
Sbjct: 146 EELDEPESDGFFKHTLPKLIRLALALPELVPGAIPLLKQGSNKSISLSQQQVASLLANAF 205

Query: 80  LCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTY 139
           LCT+PRRN+ + +S+Y+ FP INF+RLFQ+    V EK+KCL NYF RV  + PTG+VT+
Sbjct: 206 LCTFPRRNTQKKKSEYSLFPDINFNRLFQSSGQSVLEKIKCLCNYFRRVCARMPTGVVTF 265

Query: 140 SRRYLPHSQLPHWGDSR----RKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            RRY    Q P W        R++  + ISSEG IE+Q RGLLQVDFANK
Sbjct: 266 QRRYFHPKQFPEWARCEATVVREVVPIHISSEGTIEDQGRGLLQVDFANK 315

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328778420|ref|XP_003249488.1| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Apis mellifera]

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/172 (53%), Positives = 122/172 (70%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           LD+ E +IFF+ L+PK++ LAL+LP ++   +PLLK H+N +I+LSQLQIASLLANAF C
Sbjct: 181 LDEEEANIFFEVLMPKMVQLALQLPVLVTGSVPLLKRHTNGAISLSQLQIASLLANAFFC 240

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQA-------QSSCVSEKLKCLINYFVRVTTK-DP 133
           T+PRRNS  P+S+Y  +P INF+RLF A       +   V EK+KC+ +YF RVT+K  P
Sbjct: 241 TFPRRNSTNPQSEYGKYPYINFNRLFSAYKEGKWNKCESVMEKMKCIFHYFRRVTSKAAP 300

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G+VT  RRY+P S  P W +  +KL  L I+S+G IE +  G LQVDFANK
Sbjct: 301 EGVVTIQRRYIPKSDCPKWDEQVQKLLPLHITSKGTIETEGTGFLQVDFANK 352

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014506|ref|XP_003691270.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3-like [Apis florea]

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 92/172 (53%), Positives = 122/172 (70%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           LD+ E +IFF+ L+PK++ LAL+LP ++   +PLLK H+N +I+LSQLQIASLLANAF C
Sbjct: 181 LDEEEANIFFEILMPKMVQLALQLPVLVTGSVPLLKRHTNGAISLSQLQIASLLANAFFC 240

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQA-------QSSCVSEKLKCLINYFVRVTTK-DP 133
           T+PRRNS  P+S+Y  +P INF+RLF A       +   V EK+KC+ +YF RVT+K  P
Sbjct: 241 TFPRRNSTNPQSEYGKYPYINFNRLFSAYKEGKWNKCESVMEKMKCIFHYFRRVTSKAAP 300

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G+VT  RRY+P S  P W +  +KL  L I+S+G IE +  G LQVDFANK
Sbjct: 301 EGVVTIQRRYIPKSDCPKWDEQVQKLLPLHITSKGTIETEGTGFLQVDFANK 352

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859858|ref|XP_003705409.1| PREDICTED: WD repeat and FYVE domain-containing protein 3-like [Megachile rotundata]

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 122/172 (70%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           +D+ E++IFF+ L+PK++ LAL+LP ++   +PLLK H+N +I+LSQLQIASLLANAF C
Sbjct: 181 VDEEESNIFFEVLMPKMVQLALQLPVLITGAVPLLKRHTNATISLSQLQIASLLANAFFC 240

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQA-------QSSCVSEKLKCLINYFVRVTTK-DP 133
           T+PRRNS  P S+Y  +P INF+RLF A       +   V EK+KC+ +YF RVT+K  P
Sbjct: 241 TFPRRNSTNPHSEYGRYPYINFNRLFSAYKQEKRNKCESVMEKMKCIFHYFRRVTSKAAP 300

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G+VT  RRY+P S  P W +  +KL  L ++S+G IE +  G LQVDFANK
Sbjct: 301 EGVVTIQRRYIPKSDCPKWDEQVQKLLPLHVTSKGTIETEGTGFLQVDFANK 352

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550659|ref|XP_001605115.1| PREDICTED: poly(ADP-ribose) glycohydrolase-like [Nasonia vitripennis]

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 90/171 (52%), Positives = 119/171 (69%), Gaps = 8/171 (4%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           +D+ E  +    L+PKI+ LAL+LP+++   IPLLK   N +I+LSQLQ+ASLLANAFLC
Sbjct: 185 IDEEEAKMCLGSLIPKIVQLALQLPDLITGPIPLLKRQRNTTISLSQLQVASLLANAFLC 244

Query: 82  TYPRRNSNQPESQYANFPCINFSRLF-------QAQSSCVSEKLKCLINYFVRVTTKDPT 134
           T+PRRNS  P+S+Y +FP INF++LF        ++S  V EKLKC+ +YF RVT+K P 
Sbjct: 245 TFPRRNSTNPQSEYGSFPFINFNKLFSSFREERHSRSHAVMEKLKCIFHYFRRVTSKAPE 304

Query: 135 GLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
           G +T  RR++P    P W     KLP L I+S+G IE+Q  GLLQVDFANK
Sbjct: 305 GTITIQRRFVPKKSCPRWDKQHVKLPALHITSKGTIESQGAGLLQVDFANK 355

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416594|ref|XP_003491008.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and FYVE domain-containing protein 3-like [Bombus impatiens]

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 121/172 (70%), Gaps = 9/172 (5%)

Query: 22  LDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC 81
           LD+ ET+ FF+ L+PK++ LAL+LP ++   +PLLK H+N +I+LSQLQIASLLANAF C
Sbjct: 181 LDEDETNNFFETLMPKMVQLALQLPVLVTSSVPLLKRHTNGTISLSQLQIASLLANAFFC 240

Query: 82  TYPRRNSNQPESQYANFPCINFSRLFQA-------QSSCVSEKLKCLINYFVRVTTK-DP 133
           T+PRRNS  P+S+Y  +P INF+RLF A       +   V EK+KC+ +YF RVT+K  P
Sbjct: 241 TFPRRNSTNPQSEYGRYPYINFNRLFSAYKEEKWNKCESVMEKMKCIFHYFRRVTSKAAP 300

Query: 134 TGLVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            G+VT  RRY+P S  P W +  +KL  L  +S+G IE +  G LQVDFAN+
Sbjct: 301 EGVVTIQRRYIPKSDCPKWDEQVQKLLPLHTTSKGTIEAEGTGFLQVDFANR 352

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346472827|gb|AEO36258.1| hypothetical protein [Amblyomma maculatum]

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/168 (52%), Positives = 120/168 (71%), Gaps = 5/168 (2%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAF 79
           QELD  E+  FF+ LLPK+++LALRLP ++   +PLLK+  +H IT+SQLQ+  LLANAF
Sbjct: 302 QELDARESSSFFQMLLPKMVALALRLPALITQPVPLLKSGQDHIITMSQLQVGCLLANAF 361

Query: 80  LCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVS--EKLKCLINYFVRVTTKDPTGLV 137
            CT+PRRN+++  S+YAN+P INF+RLF   S      EKLKC+INYF R+T  +PTG++
Sbjct: 362 FCTFPRRNTHKSNSEYANYPDINFNRLFSGPSDETRKIEKLKCIINYFRRITKNEPTGMM 421

Query: 138 TYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
           T+ RR L  +Q   W  S  KL  +F+S+ G IE +  G+LQVDFANK
Sbjct: 422 TFRRRGL--TQPFEWASSNDKLGSVFVSASGFIEREGEGMLQVDFANK 467

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
FB|FBgn0023216	768	Parg "Poly(ADP-ribose) glycohy	0.796	0.204	0.541	1.7e-37
UNIPROTKB|F1NKA8	896	PARG "Uncharacterized protein"	0.766	0.168	0.535	1.4e-35
UNIPROTKB|F1NY76	904	PARG "Uncharacterized protein"	0.766	0.167	0.535	1.4e-35
MGI|MGI:1347094	969	Parg "poly (ADP-ribose) glycoh	0.766	0.155	0.529	1.7e-35
UNIPROTKB|F1SDW4	848	PARG "Uncharacterized protein"	0.766	0.178	0.529	2.6e-35
RGD|620387	972	Parg "poly (ADP-ribose) glycoh	0.766	0.155	0.529	2.8e-35
UNIPROTKB|Q9QYM2	972	Parg "Poly(ADP-ribose) glycohy	0.766	0.155	0.529	2.8e-35
UNIPROTKB|J9NTQ1	893	PARG "Uncharacterized protein"	0.766	0.169	0.529	3e-35
UNIPROTKB|E2REC3	976	PARG "Uncharacterized protein"	0.766	0.154	0.529	3.6e-35
UNIPROTKB|Q86W56	976	PARG "Poly(ADP-ribose) glycohy	0.766	0.154	0.529	3.6e-35

FB|FBgn0023216 Parg "Poly(ADP-ribose) glycohydrolase" [Drosophila melanogaster (taxid:7227)]

 Score = 410 (149.4 bits), Expect = 1.7e-37, P = 1.7e-37
 Identities = 91/168 (54%), Positives = 120/168 (71%)

Query:    27 TDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRR 86
             T +FF+ LLP+II LALRLP+++Q  +PLLK H N S++LSQ QI+ LLANAFLCT+PRR
Sbjct:   205 TRVFFEDLLPRIIRLALRLPDLIQSPVPLLKHHKNASLSLSQQQISCLLANAFLCTFPRR 264

Query:    87 NSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRV--TTKD----PTGLVTYS 140
             N+ + +S+Y+ FP INF+RL+Q+    V EKLKC+++YF RV  T +D    PTG+VT+ 
Sbjct:   265 NTLKRKSEYSTFPDINFNRLYQSTGPAVLEKLKCIMHYFRRVCPTERDASNVPTGVVTFV 324

Query:   141 RRY-LPHSQLPHWGDSRRKLPD--LFISSEGMIENQR-GLLQVDFANK 184
             RR  LP   L  W  S   L D  L + +EG IE++  GLLQVDFANK
Sbjct:   325 RRSGLPE-HLIDWSQSAAPLGDVPLHVDAEGTIEDEGIGLLQVDFANK 371

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=ISS;IMP;NAS

GO:0005975 "carbohydrate metabolic process" evidence=IMP

GO:0035065 "regulation of histone acetylation" evidence=IMP

GO:0006342 "chromatin silencing" evidence=IMP

GO:0005654 "nucleoplasm" evidence=IDA

GO:0051457 "maintenance of protein location in nucleus" evidence=IMP

GO:0006911 "phagocytosis, engulfment" evidence=IMP

GO:0009408 "response to heat" evidence=IMP

GO:0043484 "regulation of RNA splicing" evidence=IMP

GO:0030576 "Cajal body organization" evidence=IMP

GO:0036099 "female germ-line stem cell maintenance" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|F1NKA8 PARG "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
 Identities = 83/155 (53%), Positives = 110/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             F+ +LP ++ LAL LP +    IPLLK   NHSIT+SQ QIAS LANAF CT+PRRN+  
Sbjct:   507 FQSILPDMVKLALCLPTICTQPIPLLKQKMNHSITMSQEQIASFLANAFFCTFPRRNAKM 566

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +S    EKLK L  YF RVT K PTGLVT++R+ L   + P
Sbjct:   567 -KSEYSSYPDINFNRLFEGRSPRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQCL--QEFP 623

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W  S++KL  L ++ EG IE N +G+LQVDFAN+
Sbjct:   624 DWERSQKKLSRLHVTYEGTIESNGQGMLQVDFANR 658

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

UNIPROTKB|F1NY76 PARG "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 394 (143.8 bits), Expect = 1.4e-35, P = 1.4e-35
 Identities = 83/155 (53%), Positives = 110/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             F+ +LP ++ LAL LP +    IPLLK   NHSIT+SQ QIAS LANAF CT+PRRN+  
Sbjct:   515 FQSILPDMVKLALCLPTICTQPIPLLKQKMNHSITMSQEQIASFLANAFFCTFPRRNAKM 574

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +S    EKLK L  YF RVT K PTGLVT++R+ L   + P
Sbjct:   575 -KSEYSSYPDINFNRLFEGRSPRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQCL--QEFP 631

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W  S++KL  L ++ EG IE N +G+LQVDFAN+
Sbjct:   632 DWERSQKKLSRLHVTYEGTIESNGQGMLQVDFANR 666

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016045 "detection of bacterium" evidence=IEA

MGI|MGI:1347094 Parg "poly (ADP-ribose) glycohydrolase" [Mus musculus (taxid:10090)]

 Score = 394 (143.8 bits), Expect = 1.7e-35, P = 1.7e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF CT+PRRN+  
Sbjct:   583 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 642

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   643 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 699

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct:   700 EWERCEKPLTRLHVTYEGTIEGNGRGMLQVDFANR 734

GO:0000785 "chromatin" evidence=ISO

GO:0003682 "chromatin binding" evidence=ISO

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=ISO;IMP

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005829 "cytosol" evidence=IMP

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IMP

GO:0008152 "metabolic process" evidence=IMP

GO:0016045 "detection of bacterium" evidence=IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0045739 "positive regulation of DNA repair" evidence=ISO

UNIPROTKB|F1SDW4 PARG "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 391 (142.7 bits), Expect = 2.6e-35, P = 2.6e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ QIASLLANAF CT+PRRN+  
Sbjct:   590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N +G+LQVDFAN+
Sbjct:   707 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 741

GO:0016045 "detection of bacterium" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

RGD|620387 Parg "poly (ADP-ribose) glycohydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 392 (143.0 bits), Expect = 2.8e-35, P = 2.8e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF CT+PRRN+  
Sbjct:   586 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 645

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   646 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 702

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct:   703 EWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 737

GO:0000785 "chromatin" evidence=IDA

GO:0003682 "chromatin binding" evidence=IDA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA;ISO;IDA

GO:0005634 "nucleus" evidence=IEA;ISO;IDA

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA;ISO

GO:0008152 "metabolic process" evidence=ISO

GO:0016045 "detection of bacterium" evidence=IEA;ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO;IDA

GO:0045739 "positive regulation of DNA repair" evidence=IMP

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|Q9QYM2 Parg "Poly(ADP-ribose) glycohydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 392 (143.0 bits), Expect = 2.8e-35, P = 2.8e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF CT+PRRN+  
Sbjct:   586 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAKM 645

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   646 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 702

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct:   703 EWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 737

GO:0005975 "carbohydrate metabolic process" evidence=IEA

UNIPROTKB|J9NTQ1 PARG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 391 (142.7 bits), Expect = 3.0e-35, P = 3.0e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ QIASLLANAF CT+PRRN+  
Sbjct:   507 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 566

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   567 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 623

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N +G+LQVDFAN+
Sbjct:   624 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 658

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA

UNIPROTKB|E2REC3 PARG "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 391 (142.7 bits), Expect = 3.6e-35, P = 3.6e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ QIASLLANAF CT+PRRN+  
Sbjct:   590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N +G+LQVDFAN+
Sbjct:   707 EWERCEKPLTRLHVTYEGTIEGNGQGMLQVDFANR 741

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IEA

UNIPROTKB|Q86W56 PARG "Poly(ADP-ribose) glycohydrolase" [Homo sapiens (taxid:9606)]

 Score = 391 (142.7 bits), Expect = 3.6e-35, P = 3.6e-35
 Identities = 82/155 (52%), Positives = 109/155 (70%)

Query:    31 FKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQ 90
             ++ +LP ++ +AL LPN+    IPLLK   NHSIT+SQ QIASLLANAF CT+PRRN+  
Sbjct:   590 YQSILPDMVKIALCLPNICTQPIPLLKQKMNHSITMSQEQIASLLANAFFCTFPRRNAKM 649

Query:    91 PESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLP 150
              +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     P
Sbjct:   650 -KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFP 706

Query:   151 HWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
              W    + L  L ++ EG IE N +G+LQVDFAN+
Sbjct:   707 EWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 741

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016045 "detection of bacterium" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004649 "poly(ADP-ribose) glycohydrolase activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O46043	PARG_DROME	3, ., 2, ., 1, ., 1, 4, 3	0.5265	0.8984	0.2304	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1	LOW CONFIDENCE prediction!
3rd Layer	3.2.1.143	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	197
pfam05028	339	pfam05028, PARG_cat, Poly (ADP-ribose) glycohydrol	1e-56

>gnl|CDD|218390 pfam05028, PARG_cat, Poly (ADP-ribose) glycohydrolase (PARG)

 Score =  181 bits (462), Expect = 1e-56
 Identities = 82/170 (48%), Positives = 111/170 (65%), Gaps = 10/170 (5%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAF 79
           +ELD+ E   FF++LLP +  LALRLP +L  GIPLLK     S+TL+Q QIA+LLAN+F
Sbjct: 3   EELDESEQKEFFEELLPAMARLALRLPELLPEGIPLLKQQDAGSVTLTQEQIAALLANSF 62

Query: 80  LCTYPRRNSNQPESQYANFPCINFSRLFQA----QSSCVSEKLKCLINYFVRVTTKDPTG 135
            C +PRR+S       ++FP INF RLFQ+    +S    EKLKCL++YF RV+   PTG
Sbjct: 63  FCLFPRRDSE-----ESSFPDINFDRLFQSLYPGRSESQEEKLKCLLHYFRRVSEDMPTG 117

Query: 136 LVTYSRRYLPHSQLPHWGDSRRKLPDLFISSEGMIENQ-RGLLQVDFANK 184
            V++ R+ L     P W  S   L  + + ++G+IE+Q +G LQVDFANK
Sbjct: 118 CVSFERKSLSPLDFPLWKKSTTNLCPVEVFTDGLIEDQGQGALQVDFANK 167

Poly(ADP-ribose) glycohydrolase (PARG), is a ubiquitously expressed exo- and endoglycohydrolase which mediates oxidative and excitotoxic neuronal death. Length = 339

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	197
PF05028	340	PARG_cat: Poly (ADP-ribose) glycohydrolase (PARG);	100.0
KOG2064|consensus	517		100.0
KOG2064|consensus	517		98.26

>PF05028 PARG_cat: Poly (ADP-ribose) glycohydrolase (PARG); InterPro: IPR007724 Poly(ADP-ribose) glycohydrolase (PARG) is a ubiquitously expressed exo- and endoglycohydrolase which mediates oxidative and excitotoxic neuronal death []

Probab=100.00  E-value=2.4e-56  Score=397.64  Aligned_cols=174  Identities=46%  Similarity=0.739  Sum_probs=132.7

Q ss_pred             HHhhcChHHHHHHHHHHHHHHHHHHHcCcccccCCcccccCCCCCeEeecHHHHHHHHHHhhhcCccCCCCCCCCCccCC
Q psy4278          18 QFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSNQPESQYAN   97 (197)
Q Consensus        18 ~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~~iplL~~~~~~~v~LS~~qva~LLA~aFfctfp~~~~~~~~s~~~~   97 (197)
                      |++.++++|+++||+++||+||+|||+||+++|++||+|.++++++++|||+|||||||||||||||+|++     ++.+
T Consensus         1 f~~~~~~~e~~~Ff~~~lp~i~~lal~l~~l~~~~i~~L~~~~~~~v~lsr~qva~LlA~aFfct~p~~~~-----~~~~   75 (340)
T PF05028_consen    1 FDEELDEEESQDFFSETLPFIARLALRLPELFPEPIPLLKQQQNGSVTLSREQVACLLANAFFCTFPRRDS-----EYKN   75 (340)
T ss_dssp             -HTTS-HHHHHHHHHTHHHHHHHHHHTHHHCS-S--B-B-TT--EEEEEEHHHHHHHHHHHHTT--TTSSS-----TCCC
T ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHhhHhhcCCcChhhccCCCCeEEEEHHHHHHHHHHHHhCCCCCCcc-----cccc
Confidence            67999999999999999999999999999999999999999999999999999999999999999999843     3689


Q ss_pred             CCccchhHhhh----ccChhhHHHHHHHHHHHhhhhccCCCceEEEEEeec-CCCCCCCccccCCCCCCEEEecCCCccC
Q psy4278          98 FPCINFSRLFQ----AQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYL-PHSQLPHWGDSRRKLPDLFISSEGMIEN  172 (197)
Q Consensus        98 ~p~~nF~~lf~----~~~~~~~~KLkcll~YF~rv~~~~p~g~Vtf~R~~l-~~~~~~~w~~s~~~L~~v~v~~~g~IEd  172 (197)
                      +|++||++||+    ..++++++||+||+|||++|++.+|+|+|+|+|+++ +....++|.+++.+|++++|.++|+|||
T Consensus        76 ~~~~nF~~l~~~~~~~~~~~~~~KLkcll~YF~~v~~~~~~~~V~f~R~~~~~~~~~~~w~~~~~~l~~~~v~~~g~IEd  155 (340)
T PF05028_consen   76 FPSINFNKLFSSFGQSDSESQIEKLKCLLHYFERVCESMPNGVVSFERKVLDNWLSIPDWSNSTKPLCPVEVFHDGRIED  155 (340)
T ss_dssp             S---SGGGGCS----SS-THHHHHHHHHHHHHHHHHHS----EEEEEEEE----SSB--CCC---B---EEEESSS-HHH
T ss_pred             CCCCCHHHHhhhcccCccHhHHHHHHHHHHHHHHHhccCCCccEEEEEEeeccccchhhHHhcccccCCceeecCCcccc
Confidence            99999999999    446789999999999999999999999999999999 5566799999999999999999999999


Q ss_pred             C-CCCeeEEeecCCCCCcccCCCcC
Q psy4278         173 Q-RGLLQVDFANKSHHLEIEDRRKT  196 (197)
Q Consensus       173 ~-~~~lqVDFANk~IGGGvl~~~~~  196 (197)
                      . .+++||||||||||||||+++-+
T Consensus       156 ~~~~~lqVDFANk~IGGGvL~~g~v  180 (340)
T PF05028_consen  156 SGSGCLQVDFANKYIGGGVLGSGCV  180 (340)
T ss_dssp             HTTTSEEEEEE-SSTTTTTTTT--S
T ss_pred             CCCCcEEEEEeccccCCccccCCcc
Confidence            9 99999999999999999997643

; GO: 0004649 poly(ADP-ribose) glycohydrolase activity, 0005975 carbohydrate metabolic process; PDB: 4FC2_D 3UEL_C 3UEK_A.

>KOG2064|consensus

Probab=100.00  E-value=1.4e-35  Score=268.45  Aligned_cols=175  Identities=33%  Similarity=0.582  Sum_probs=160.6

Q ss_pred             hhcChHHHHHHHHHHHHHHHHHHHcCccccc--------------CCcccccCCCCCeEeecHHHHHHHHHHhhhcCccC
Q psy4278          20 QELDQLETDIFFKQLLPKIISLALRLPNVLQ--------------CGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPR   85 (197)
Q Consensus        20 ~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~--------------~~iplL~~~~~~~v~LS~~qva~LLA~aFfctfp~   85 (197)
                      +.++..+....|+.++|.++.+||+.+.+..              .++++|+..+.+.+.++|++|.||+||+|||+||.
T Consensus        90 qf~d~~~~~~~~~~~~~~~a~~al~~~~~~~s~~~g~d~~~~~~~~~~rvlks~~~~l~~lsqelVG~lls~sf~~i~~~  169 (517)
T KOG2064|consen   90 QFLDLLHSARWFQETIEELALLALRFFSLLESHHVGEDNLLEGIKTGVRVLKSAKAGLVFLSQELVGALLSNSFFCIFPA  169 (517)
T ss_pred             HHHHHHHHHhhhccccHhHhhHHhhhhhhhhccccchhhhhhhcccceeecccccccchHHHHHHHhHHhhccceeecch
Confidence            4455667778899999999999999987753              46899999999999999999999999999999999


Q ss_pred             CCCCCCCCccCCCCccchhHhhhccChhhHHHHHHHHHHHhhhhccCCCceEEEEEeecCCC-CCCCccccCCCCCCEEE
Q psy4278          86 RNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHS-QLPHWGDSRRKLPDLFI  164 (197)
Q Consensus        86 ~~~~~~~s~~~~~p~~nF~~lf~~~~~~~~~KLkcll~YF~rv~~~~p~g~Vtf~R~~l~~~-~~~~w~~s~~~L~~v~v  164 (197)
                      .+..++...+.++|.++|.+++.+.+.++.||||||+|||+|++...|.|.|+|+|+....+ +...|+.++..++++++
T Consensus       170 ~~~g~~~~~~~~~~~lsf~~i~~s~~~~q~eKlk~i~hYFdr~~s~~p~G~VsF~rr~~a~d~d~efwk~~~~~~~pv~~  249 (517)
T KOG2064|consen  170 SNRGNMHLPEINFPPLSFMRIYQSTNSCQEEKLKCIMHYFDRMSSDVPIGAVSFERRIQARDQDIEFWKKSSTNLLPVVV  249 (517)
T ss_pred             hhhccCCCCccCCCccchhhhhccccHHHHHHHHHHHHHHHHhccCCCCcceeeeeccccchhhhhhhhhcccCCCceEE
Confidence            99887788888999999999999999999999999999999999999999999999998766 46789999999999999


Q ss_pred             ecCCCccCC-CCCeeEEeecCCCCCcccCCC
Q psy4278         165 SSEGMIENQ-RGLLQVDFANKSHHLEIEDRR  194 (197)
Q Consensus       165 ~~~g~IEd~-~~~lqVDFANk~IGGGvl~~~  194 (197)
                      +.+|.|||. .+++||||||||+|||||..+
T Consensus       250 ~~~~~~~e~~~~~tqvDFANk~LGGGvL~~G  280 (517)
T KOG2064|consen  250 HFDGMIEEEGALATQVDFANKYLGGGVLSHG  280 (517)
T ss_pred             ecccceecccccccccchhhhhcCCCcccCc
Confidence            999999999 899999999999999999876

>KOG2064|consensus

Probab=98.26  E-value=2.1e-07  Score=85.74  Aligned_cols=82  Identities=33%  Similarity=0.427  Sum_probs=72.8

Q ss_pred             CCCCCCCCchHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHcCcccccCCcccccCCCCCeEeecHHHHHHHHHHhhhcC
Q psy4278           3 PPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCT   82 (197)
Q Consensus         3 ~~~~~~w~f~~L~~f~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~~iplL~~~~~~~v~LS~~qva~LLA~aFfct   82 (197)
                      ..|...|+|.++-.|=++.|...+.+....... .||.+++-+|.++..++||+.+..+++++++++|+++|+||+||||
T Consensus       436 ~a~q~~RPf~sy~tFG~~eL~~~~~~~~~~~~~-d~v~~~~l~~~i~S~~~pl~~~~~~~~~~~ra~~~s~l~~~~~~~~  514 (517)
T KOG2064|consen  436 VAGQARRPFTSYYTFGDEELRNLCQEMLTLFRN-DMVTIGQLLPIICSQPIPLLKQKMNHSIEMRAEQISSLLANAFFCT  514 (517)
T ss_pred             HHhhcCCchhheeeccHHHHHHHHHHHHHHHHh-ccchHhhhhHHHhcCCccccchhhhchHHHHHHHHHHHHhhHHHhc
Confidence            356788999999999888888877766655434 9999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q psy4278          83 YPR   85 (197)
Q Consensus        83 fp~   85 (197)
                      +|+
T Consensus       515 ~~r  517 (517)
T KOG2064|consen  515 FPR  517 (517)
T ss_pred             CCC
Confidence            986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	197
3uek_A	588	Crystal Structure Of The Catalytic Domain Of Rat Po		6e-39
4b1j_A	531	Structure Of Human Parg Catalytic Domain In Complex		3e-38
4fc2_A	521	Crystal Structure Of Mouse Poly(Adp-Ribose) Glycohy		5e-38
4b1h_A	531	Structure Of Human Parg Catalytic Domain In Complex		6e-38
4a0d_A	531	Structure Of Unliganded Human Parg Catalytic Domain		6e-38
4b1g_A	531	Structure Of Unliganded Human Parg Catalytic Domain		5e-37
4epq_A	477	Canonical Poly(Adp-Ribose) Glycohydrolase Rbpi Inhi		7e-07
4epp_A	477	Canonical Poly(Adp-Ribose) Glycohydrolase From Tetr		7e-07

>pdb|3UEK|A Chain A, Crystal Structure Of The Catalytic Domain Of Rat Poly (Adp-Ribose) Glycohydrolase Length = 588

Iteration: 1
 Score =  156 bits (395), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 82/156 (52%), Positives = 109/156 (69%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF CT+PRRN+ 
Sbjct: 201 LYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFCTFPRRNAK 260
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
             +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     
Sbjct: 261 M-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDF 317
Query: 150 PHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
           P W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct: 318 PEWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 353

>pdb|4B1J|A Chain A, Structure Of Human Parg Catalytic Domain In Complex With Adp-hpd Length = 531

Iteration: 1
 Score =  154 bits (389), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP ++ +AL LPN+    IPLL A  NHSIT+SQ QIASLLANAF CT+PRRN+ 
Sbjct: 144 LYQSILPDMVKIALXLPNICTQPIPLLAAAMNHSITMSQEQIASLLANAFFCTFPRRNAK 203
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
             +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT   PTGLVT++R+ L     
Sbjct: 204 M-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTAAAPTGLVTFTRQSL--EDF 260
Query: 150 PHWGDSRRKLPDLFISSEGMI-ENQRGLLQVDFANK 184
           P W    + L  L ++ EG I EN +G+LQVDFAN+
Sbjct: 261 PEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 296

>pdb|4FC2|A Chain A, Crystal Structure Of Mouse Poly(Adp-Ribose) Glycohydrolase (Parg) Catalytic Domain Length = 521

Iteration: 1
 Score =  153 bits (387), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP  + +AL LPN+    IPLLK   NHS+T SQ QIASLLANAF CT+PRRN+ 
Sbjct: 144 LYQSILPDXVKIALCLPNICTQPIPLLKQKXNHSVTXSQEQIASLLANAFFCTFPRRNAK 203
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
             +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT++R+ L     
Sbjct: 204 M-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDF 260
Query: 150 PHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
           P W    + L  L ++ EG IE N RG LQVDFAN+
Sbjct: 261 PEWERCEKPLTRLHVTYEGTIEGNGRGXLQVDFANR 296

>pdb|4B1H|A Chain A, Structure Of Human Parg Catalytic Domain In Complex With Adp-ribose Length = 531

Iteration: 1
 Score =  153 bits (387), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP ++ +AL LPN+    IPLL A  NHSIT+SQ QIASLLANAF CT+PRRN+ 
Sbjct: 144 LYQSILPDMVKIALCLPNICTQPIPLLAAAMNHSITMSQEQIASLLANAFFCTFPRRNAK 203
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
             +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT   PTGLVT++R+ L     
Sbjct: 204 M-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTAAAPTGLVTFTRQSL--EDF 260
Query: 150 PHWGDSRRKLPDLFISSEGMI-ENQRGLLQVDFANK 184
           P W    + L  L ++ EG I EN +G+LQVDFAN+
Sbjct: 261 PEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 296

>pdb|4A0D|A Chain A, Structure Of Unliganded Human Parg Catalytic Domain Length = 531

Iteration: 1
 Score =  153 bits (386), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 81/156 (51%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP ++ +AL LPN+    IPLL A  NHSIT+SQ QIASLLANAF CT+PRRN+ 
Sbjct: 144 LYQSILPDMVKIALCLPNICTQPIPLLAAAMNHSITMSQEQIASLLANAFFCTFPRRNAK 203
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
             +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT   PTGLVT++R+ L     
Sbjct: 204 M-KSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTAAAPTGLVTFTRQSL--EDF 260
Query: 150 PHWGDSRRKLPDLFISSEGMI-ENQRGLLQVDFANK 184
           P W    + L  L ++ EG I EN +G+LQVDFAN+
Sbjct: 261 PEWERCEKPLTRLHVTYEGTIEENGQGMLQVDFANR 296

>pdb|4B1G|A Chain A, Structure Of Unliganded Human Parg Catalytic Domain Length = 531

Iteration: 1
 Score =  150 bits (378), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 81/156 (51%), Positives = 106/156 (67%), Gaps = 4/156 (2%)
Query: 30  FFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNSN 89
            ++ +LP  + +AL LPN+    IPLL A  NHSIT SQ QIASLLANAF CT+PRRN+ 
Sbjct: 144 LYQSILPDXVKIALCLPNICTQPIPLLAAAXNHSITXSQEQIASLLANAFFCTFPRRNA- 202
Query: 90  QPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQL 149
           + +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT   PTGLVT++R+ L     
Sbjct: 203 KXKSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTAAAPTGLVTFTRQSL--EDF 260
Query: 150 PHWGDSRRKLPDLFISSEGMI-ENQRGLLQVDFANK 184
           P W    + L  L ++ EG I EN +G LQVDFAN+
Sbjct: 261 PEWERCEKPLTRLHVTYEGTIEENGQGXLQVDFANR 296

>pdb|4EPQ|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase Rbpi Inhibitor Complex From Tetrahymena Thermophila Length = 477

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 30  FFKQLLPKIISLALRLPNV-LQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNS 88
           F +Q +PKI  L L++    L+  IP  K    +    S+ +I+  ++  FLC       
Sbjct: 106 FLEQFIPKICQLVLKIKKKQLKNQIP--KESKIYEAAFSREEISYYVSCMFLCILK---- 159
Query: 89  NQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRV---TTKDPTGLVTYSRRYLP 145
           +Q    Y +F  I    L Q  +    EK+KC   Y  +    + K+   +V + R  + 
Sbjct: 160 DQDRKIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQR--IN 217
Query: 146 HSQLP---HWGDSRR--KLPDLFISSEGMIENQRGLLQVDFAN 183
             QL    +W D  +  KL ++ ++ + +IE+  G LQVDFAN
Sbjct: 218 CGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFAN 260

>pdb|4EPP|A Chain A, Canonical Poly(Adp-Ribose) Glycohydrolase From Tetrahymena Thermophila. Length = 477

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 30  FFKQLLPKIISLALRLPNV-LQCGIPLLKAHSNHSITLSQLQIASLLANAFLCTYPRRNS 88
           F +Q +PKI  L L++    L+  IP  K    +    S+ +I+  ++  FLC       
Sbjct: 106 FLEQFIPKICQLVLKIKKKQLKNQIP--KESKIYEAAFSREEISYYVSCMFLCILK---- 159
Query: 89  NQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRV---TTKDPTGLVTYSRRYLP 145
           +Q    Y +F  I    L Q  +    EK+KC   Y  +    + K+   +V + R  + 
Sbjct: 160 DQDRKIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQR--IN 217
Query: 146 HSQLP---HWGDSRR--KLPDLFISSEGMIENQRGLLQVDFAN 183
             QL    +W D  +  KL ++ ++ + +IE+  G LQVDFAN
Sbjct: 218 CGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFAN 260

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	197
3uek_A	588	Poly(ADP-ribose) glycohydrolase; mammalian PArg, m	4e-49
4fc2_A	521	Poly(ADP-ribose) glycohydrolase; mouse, PArg; 1.91	4e-48
4epp_A	477	Poly(ADP-ribose) glycohydrolase; marco domain, PAR	2e-40

>3uek_A Poly(ADP-ribose) glycohydrolase; mammalian PArg, macrodomain; 1.95A {Rattus norvegicus} PDB: 3uel_A* Length = 588

 Score =  166 bits (422), Expect = 4e-49
 Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 4/166 (2%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAF 79
           + L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF
Sbjct: 191 KVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAF 250

Query: 80  LCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTY 139
            CT+PRRN+ + +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT+
Sbjct: 251 FCTFPRRNA-KMKSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTF 309

Query: 140 SRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
           +R+ L     P W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct: 310 TRQSL--EDFPEWERCDKPLTRLHVTYEGTIEGNGRGMLQVDFANR 353

>4fc2_A Poly(ADP-ribose) glycohydrolase; mouse, PArg; 1.91A {Mus musculus} Length = 521

 Score =  163 bits (412), Expect = 4e-48
 Identities = 84/166 (50%), Positives = 115/166 (69%), Gaps = 4/166 (2%)

Query: 20  QELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAF 79
           + L++ E    ++ +LP ++ +AL LPN+    IPLLK   NHS+T+SQ QIASLLANAF
Sbjct: 134 KVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAF 193

Query: 80  LCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTY 139
            CT+PRRN+ + +S+Y+++P INF+RLF+ +SS   EKLK L  YF RVT K PTGLVT+
Sbjct: 194 FCTFPRRNA-KMKSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTF 252

Query: 140 SRRYLPHSQLPHWGDSRRKLPDLFISSEGMIE-NQRGLLQVDFANK 184
           +R+ L     P W    + L  L ++ EG IE N RG+LQVDFAN+
Sbjct: 253 TRQSL--EDFPEWERCEKPLTRLHVTYEGTIEGNGRGMLQVDFANR 296

>4epp_A Poly(ADP-ribose) glycohydrolase; marco domain, PAR; HET: APR; 1.95A {Tetrahymena thermophila} PDB: 4epq_A* Length = 477

 Score =  142 bits (358), Expect = 2e-40
 Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 11/172 (6%)

Query: 19  FQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANA 78
           F++LD+ E   F +Q +PKI  L L++    Q    + K    +    S+ +I+  ++  
Sbjct: 95  FEQLDKEEQTYFLEQFIPKICQLVLKIKK-KQLKNQIPKESKIYEAAFSREEISYYVSCM 153

Query: 79  FLCTYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRV---TTKDPTG 135
           FLC    ++       Y +F  I    L Q  +    EK+KC   Y  +    + K+   
Sbjct: 154 FLCILKDQDR----KIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKE 209

Query: 136 LVTYSRRYLPH-SQLPHWGDSRR--KLPDLFISSEGMIENQRGLLQVDFANK 184
           +V + R          +W D  +  KL ++ ++ + +IE+  G LQVDFAN 
Sbjct: 210 VVIFQRINCGQLEDYENWVDKLKAIKLKNVQLTDDKLIEDFPGTLQVDFANC 261

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	197
3uek_A	588	Poly(ADP-ribose) glycohydrolase; mammalian PArg, m	100.0
4a0d_A	531	Poly(ADP-ribose) glycohydrolase; 1.75A {Homo sapie	100.0
4epp_A	477	Poly(ADP-ribose) glycohydrolase; marco domain, PAR	100.0

>3uek_A Poly(ADP-ribose) glycohydrolase; mammalian PArg, macrodomain; 1.95A {Rattus norvegicus} PDB: 3uel_A*

Probab=100.00  E-value=2.3e-64  Score=470.02  Aligned_cols=191  Identities=45%  Similarity=0.713  Sum_probs=183.8

Q ss_pred             CCCCCCCCCchHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHcCcccccCCcccccCCCCCeEeecHHHHHHHHHHhhhc
Q psy4278           2 KPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC   81 (197)
Q Consensus         2 ~~~~~~~w~f~~L~~f~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~~iplL~~~~~~~v~LS~~qva~LLA~aFfc   81 (197)
                      |++|+++|||++|+.||++.++++|+++||+++||+||+|||+||+++|++||+|+++++++|+|||+||||||||||||
T Consensus       173 n~~~~~~w~f~~L~~f~~~~l~~~e~~~FF~~~lP~i~~LAL~lp~l~~~~iplL~~~~~~sv~LSq~QvA~LLAnaFFC  252 (588)
T 3uek_A          173 NVAYSKKWDFTALVDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLKQKMNHSVTMSQEQIASLLANAFFC  252 (588)
T ss_dssp             CGGGTTTCCCHHHHHHHHTTSCHHHHHHHHHTHHHHHHHHHHTHHHHCCSCCBCBCTTCCEEEEEEHHHHHHHHHHHHTT
T ss_pred             hhhhcccCCHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHHHhhchhhcccccchhccCCCceEEecHHHHHHHHHHHHhc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCccCCCCccchhHhhhccChhhHHHHHHHHHHHhhhhccCCCceEEEEEeecCCCCCCCccccCCCCCC
Q psy4278          82 TYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPD  161 (197)
Q Consensus        82 tfp~~~~~~~~s~~~~~p~~nF~~lf~~~~~~~~~KLkcll~YF~rv~~~~p~g~Vtf~R~~l~~~~~~~w~~s~~~L~~  161 (197)
                      |||+|+++ .+++|.+||+|||++||++.++.++|||+||||||++|++.+|+|+|||+|+++  ++.|+|..++.+|++
T Consensus       253 tfP~r~~~-~~~~~~~~p~iNF~~lf~~~~~~~~eKLkcll~YF~rv~~~~p~G~Vtf~R~~l--~~~~~w~~s~~~L~~  329 (588)
T 3uek_A          253 TFPRRNAK-MKSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTEKKPTGLVTFTRQSL--EDFPEWERCDKPLTR  329 (588)
T ss_dssp             CCTTCCCS-SSCTTTTSCCCSCGGGGCSSCSSHHHHHHHHHHHHHHHHHSCCCCEEEEEEEEC--SCCCCGGGCCCCCCC
T ss_pred             cCCCCCcc-cccccccCCCcCHHHHhcCcchhhHHHHHHHHHHHHHHhcCCCCceEEEEEEec--CCccchhhhcCcCcc
Confidence            99999975 468899999999999999988889999999999999999999999999999999  567999999999999


Q ss_pred             EEEecCCCccCC-CCCeeEEeecCCCCCcccCCCc
Q psy4278         162 LFISSEGMIENQ-RGLLQVDFANKSHHLEIEDRRK  195 (197)
Q Consensus       162 v~v~~~g~IEd~-~~~lqVDFANk~IGGGvl~~~~  195 (197)
                      ++|.++|+|||+ .|++|||||||+||||||+++-
T Consensus       330 l~V~~~G~IEd~~~~~lqVDFANk~IGGGvL~~g~  364 (588)
T 3uek_A          330 LHVTYEGTIEGNGRGMLQVDFANRFVGGGVTGAGL  364 (588)
T ss_dssp             EEEESSSCHHHHTTTSEEEEEECSSTTTTTTSSCC
T ss_pred             eEEecCCccCcCCCCcEEEEEeccccCccccCCCc
Confidence            999999999998 8999999999999999999864

>4a0d_A Poly(ADP-ribose) glycohydrolase; 1.75A {Homo sapiens} PDB: 4fc2_A

Probab=100.00  E-value=3.7e-62  Score=453.50  Aligned_cols=191  Identities=44%  Similarity=0.701  Sum_probs=184.0

Q ss_pred             CCCCCCCCCchHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHcCcccccCCcccccCCCCCeEeecHHHHHHHHHHhhhc
Q psy4278           2 KPPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQCGIPLLKAHSNHSITLSQLQIASLLANAFLC   81 (197)
Q Consensus         2 ~~~~~~~w~f~~L~~f~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~~iplL~~~~~~~v~LS~~qva~LLA~aFfc   81 (197)
                      |++|+++|+|++|+.||++.++++|+++||++|||+||+|||+||+++|++||+|+++++++|+|||+||||||||||||
T Consensus       116 n~~~~~~~~f~~L~~f~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~~i~lL~~~~~~~v~LSr~QvA~LLA~aFfc  195 (531)
T 4a0d_A          116 NVAYSKKWDFTALIDFWDKVLEEAEAQHLYQSILPDMVKIALCLPNICTQPIPLLAAAMNHSITMSQEQIASLLANAFFC  195 (531)
T ss_dssp             CGGGTTTCCCHHHHHHHHHTSCHHHHHHHHHTHHHHHHHHHHTHHHHCCSCCBCBCTTCCEEEEEEHHHHHHHHHHHHTT
T ss_pred             hHHhcCCCChHHHHHHHHhhCCHHHHHHHHHhHHHHHHHHHHhhhhhcCCCCeeeecCCcceEEEcHHHHHHHHHHHHhC
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCccCCCCccchhHhhhccChhhHHHHHHHHHHHhhhhccCCCceEEEEEeecCCCCCCCccccCCCCCC
Q psy4278          82 TYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTTKDPTGLVTYSRRYLPHSQLPHWGDSRRKLPD  161 (197)
Q Consensus        82 tfp~~~~~~~~s~~~~~p~~nF~~lf~~~~~~~~~KLkcll~YF~rv~~~~p~g~Vtf~R~~l~~~~~~~w~~s~~~L~~  161 (197)
                      |||+|++. .+++|.++|+|||.++|.+.++.++|||+||+|||++|++.+|+|.|+|+|+++  .+.|+|..++.+|++
T Consensus       196 tfP~r~~~-~~~~~~~~~~inF~~l~~~~~~~~~eKLkcLl~YF~rv~~~~~~g~Vsf~R~~l--~~~~~w~~s~~~L~~  272 (531)
T 4a0d_A          196 TFPRRNAK-MKSEYSSYPDINFNRLFEGRSSRKPEKLKTLFCYFRRVTAAAPTGLVTFTRQSL--EDFPEWERCEKPLTR  272 (531)
T ss_dssp             CCTTSCCT-TCSTTTTSCCCSCGGGGSSCCTTHHHHHHHHHHHHHHHHHSCCCCEEEEEEEEC--SCCCCGGGCCCBCCC
T ss_pred             cCCCCCcc-cccccCCCCcCcHHHHHhCcCHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEec--CCcccHHHccCcCCc
Confidence            99999874 468899999999999999988899999999999999999999999999999999  678999999999999


Q ss_pred             EEEecCCCccCC-CCCeeEEeecCCCCCcccCCCc
Q psy4278         162 LFISSEGMIENQ-RGLLQVDFANKSHHLEIEDRRK  195 (197)
Q Consensus       162 v~v~~~g~IEd~-~~~lqVDFANk~IGGGvl~~~~  195 (197)
                      ++|.++|+|||+ .+++|||||||+||||||+++-
T Consensus       273 l~V~~~g~IEd~~~~~lqVDFANk~IGGGvL~~G~  307 (531)
T 4a0d_A          273 LHVTYEGTIEENGQGMLQVDFANRFVGGGVTSAGL  307 (531)
T ss_dssp             EEEESSSCHHHHTTTSEEEEEECSSTTTTTTTTCC
T ss_pred             eEEeccCccccCCCCcEEEEecccccCcccccCCc
Confidence            999999999998 8999999999999999999764

>4epp_A Poly(ADP-ribose) glycohydrolase; marco domain, PAR; HET: APR; 1.95A {Tetrahymena thermophila} PDB: 4epq_A*

Probab=100.00  E-value=9.9e-57  Score=410.50  Aligned_cols=183  Identities=25%  Similarity=0.405  Sum_probs=166.8

Q ss_pred             CCCCCCCCchHHHHHHHhhcChHHHHHHHHHHHHHHHHHHHcCcccccC-CcccccCCCCCeEeecHHHHHHHHHHhhhc
Q psy4278           3 PPKSDLWFIDVKQLLQFQELDQLETDIFFKQLLPKIISLALRLPNVLQC-GIPLLKAHSNHSITLSQLQIASLLANAFLC   81 (197)
Q Consensus         3 ~~~~~~w~f~~L~~f~~~~l~~~e~~~Ff~~~lP~i~~lAL~lp~l~~~-~iplL~~~~~~~v~LS~~qva~LLA~aFfc   81 (197)
                      ..+...|+|.+|    ++.++++|+++||++|||+||+|||+||+++|+ +||+  ++.+.+|+|||+||||||||||||
T Consensus        83 ~~~~~~~~~~~l----~e~l~~~e~~~FF~~~lP~ia~lAL~Lp~l~~~~~ipl--~~~~~sv~LSr~QvA~LLAnaFFc  156 (477)
T 4epp_A           83 QNDEKYFNLKAV----FEQLDKEEQTYFLEQFIPKICQLVLKIKKKQLKNQIPK--ESKIYEAAFSREEISYYVSCMFLC  156 (477)
T ss_dssp             CCTTTTHHHHHH----HHHSCHHHHHHHHHTHHHHHHHHHHTCCCSEEEECCCC--TTCEEEEEEEHHHHHHHHHHHHTT
T ss_pred             CCcccccCHHHH----HHhcCHHHHHHHHHHHHHHHHHHHHhchhhccCCCCCc--cCCCceEEeeHHHHHHHHHHHHhC
Confidence            344567888886    477888999999999999999999999999998 7999  567889999999999999999999


Q ss_pred             CccCCCCCCCCCccCCCCccchhHhhhccChhhHHHHHHHHHHHhhhhc---cCCCceEEEEEeecC-CCCCCCccccCC
Q psy4278          82 TYPRRNSNQPESQYANFPCINFSRLFQAQSSCVSEKLKCLINYFVRVTT---KDPTGLVTYSRRYLP-HSQLPHWGDSRR  157 (197)
Q Consensus        82 tfp~~~~~~~~s~~~~~p~~nF~~lf~~~~~~~~~KLkcll~YF~rv~~---~~p~g~Vtf~R~~l~-~~~~~~w~~s~~  157 (197)
                      |||+|+.    ++|.++|+|||++||++.+..+++||+||+|||++|+.   ++|+|+|||+|++++ ..+.|+|..++.
T Consensus       157 tfP~r~~----~~~~~~p~iNF~~lf~~~~~~~~eKLkcll~YF~rv~~~~~~~p~g~Vtf~R~~l~~~~~~~~W~~s~~  232 (477)
T 4epp_A          157 ILKDQDR----KIYKDFRLIYLKDLVQQINIRRQEKIKCFYEYLKQALDFSEKESKEVVIFQRINCGQLEDYENWVDKLK  232 (477)
T ss_dssp             CCEETTT----TEECSSHHHHSCCSSHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTCEEEEEEEECCCCCCHHHHHHHGG
T ss_pred             cCCCCCc----cccccCCcccHHHHhcCccHHHHHHHHHHHHHHHHHhhccccCCCceEEEEEEecCccccccchhhccc
Confidence            9999984    45889999999999999888899999999999999998   669999999999996 556789999987


Q ss_pred             --CCCCEEEecCCCccCCCCCeeEEeecCCCCCcccCCCc
Q psy4278         158 --KLPDLFISSEGMIENQRGLLQVDFANKSHHLEIEDRRK  195 (197)
Q Consensus       158 --~L~~v~v~~~g~IEd~~~~lqVDFANk~IGGGvl~~~~  195 (197)
                        +|++|+|.++|+|||..+++|||||||+||||||+++-
T Consensus       233 ~~~L~~l~v~~~g~IEd~~~~lqVDFANK~IGGGvL~~g~  272 (477)
T 4epp_A          233 AIKLKNVQLTDDKLIEDFPGTLQVDFANCDIGGGILGNGL  272 (477)
T ss_dssp             GCBCCCEEEESSCCGGGCTTSEEEEEECSSTTTTTTTTCC
T ss_pred             cCCCccEEEecCCcccCCCCcEEEEEeccccCCccCCCCc
Confidence              99999999999999999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00