Psyllid ID: psy4343


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
MSKLNSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLKK
cccccccccccccHHHHHHHHHHHHHHHHHHccccEEccccccccEEEccEEEccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcc
cccccccccccccHHHHHHHHHHHHHHHHHcccEEccccccccccEEEccEEEccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcc
msklnssietplsesvlADIIPKAKDyalmhgagmrsrtnfsedslinapfallpssfprkefekavKIQPVLNELIHRVAHSYSFLKETLKK
msklnssietplsesvLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRvahsysflketlkk
MSKLNSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLKK
****************LADIIPKAKDYALMHGA***********SLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFL******
*****************ADIIPKAKDYALMHGAGMRSRTNF*EDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLK*
**********PLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLKK
****NSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLKK
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSKLNSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYSFLKETLKK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query93 2.2.26 [Sep-21-2011]
P35668 474 Glutathione synthetase OS N/A N/A 0.817 0.160 0.402 3e-08
O22494 546 Glutathione synthetase, c N/A N/A 0.516 0.087 0.375 3e-06
P46416 539 Glutathione synthetase, c yes N/A 0.881 0.152 0.287 8e-06
P46413 474 Glutathione synthetase OS yes N/A 0.838 0.164 0.367 3e-05
Q08220 491 Glutathione synthetase OS yes N/A 0.763 0.144 0.342 6e-05
O23732 530 Glutathione synthetase, c N/A N/A 0.526 0.092 0.326 7e-05
Q54E83 476 Glutathione synthetase OS yes N/A 0.849 0.165 0.321 9e-05
P51855 474 Glutathione synthetase OS yes N/A 0.838 0.164 0.354 0.0002
Q5EAC2 474 Glutathione synthetase OS yes N/A 0.838 0.164 0.329 0.0005
>sp|P35668|GSHB_XENLA Glutathione synthetase OS=Xenopus laevis GN=gss PE=2 SV=1 Back     alignment and function desciption
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)

Query: 16 VLADIIPKAKDYALMHGAGMRSRTN-FSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLN 74
          +L ++ P A D AL+ G  MR++ +  S D +  APFALLPS  P+  FE+A  +Q   N
Sbjct: 14 LLEELAPIAIDAALLQGVLMRTKESPNSSDVVSFAPFALLPSPVPKALFEQAKCVQEDFN 73

Query: 75 ELIHRVAHSYSFLKETL 91
           L+ R++   SFL++ L
Sbjct: 74 TLVDRISQDTSFLEQVL 90





Xenopus laevis (taxid: 8355)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: 3
>sp|O22494|GSHB_SOLLC Glutathione synthetase, chloroplastic OS=Solanum lycopersicum GN=GSH2 PE=2 SV=1 Back     alignment and function description
>sp|P46416|GSHB_ARATH Glutathione synthetase, chloroplastic OS=Arabidopsis thaliana GN=GSH2 PE=2 SV=3 Back     alignment and function description
>sp|P46413|GSHB_RAT Glutathione synthetase OS=Rattus norvegicus GN=Gss PE=1 SV=1 Back     alignment and function description
>sp|Q08220|GSHB_YEAST Glutathione synthetase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GSH2 PE=1 SV=1 Back     alignment and function description
>sp|O23732|GSHB_BRAJU Glutathione synthetase, chloroplastic OS=Brassica juncea GN=GSH2 PE=2 SV=1 Back     alignment and function description
>sp|Q54E83|GSHB_DICDI Glutathione synthetase OS=Dictyostelium discoideum GN=gshB PE=3 SV=1 Back     alignment and function description
>sp|P51855|GSHB_MOUSE Glutathione synthetase OS=Mus musculus GN=Gss PE=2 SV=1 Back     alignment and function description
>sp|Q5EAC2|GSHB_BOVIN Glutathione synthetase OS=Bos taurus GN=GSS PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
242009063 482 glutathione synthetase, putative [Pedicu 0.956 0.184 0.595 3e-25
312375093 528 hypothetical protein AND_15077 [Anophele 0.956 0.168 0.640 5e-25
91085575 482 PREDICTED: similar to glutathione synthe 0.892 0.172 0.638 2e-24
270010046 533 hypothetical protein TcasGA2_TC009391 [T 0.892 0.155 0.638 2e-24
157120878 495 glutathione synthetase [Aedes aegypti] g 0.956 0.179 0.640 3e-24
157120880 482 glutathione synthetase [Aedes aegypti] g 0.956 0.184 0.640 3e-24
195133180 565 GI16238 [Drosophila mojavensis] gi|19390 0.946 0.155 0.602 1e-23
195045991 539 GH24557 [Drosophila grimshawi] gi|193892 0.946 0.163 0.602 1e-23
281361038 248 glutathione synthetase, isoform G [Droso 0.946 0.354 0.602 2e-23
347964000 527 AGAP000534-PB [Anopheles gambiae str. PE 0.946 0.166 0.579 2e-23
>gi|242009063|ref|XP_002425312.1| glutathione synthetase, putative [Pediculus humanus corporis] gi|212509086|gb|EEB12574.1| glutathione synthetase, putative [Pediculus humanus corporis] Back     alignment and taxonomy information
 Score =  119 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/89 (59%), Positives = 69/89 (77%)

Query: 3  KLNSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKE 62
          ++N  +  P+ + + +D++ K KD+ALMHGAGMRS+TNF+ DSL  APF L PSSFPR E
Sbjct: 5  RINPCLSLPIDKKIFSDLVDKTKDWALMHGAGMRSKTNFNLDSLNFAPFVLFPSSFPRSE 64

Query: 63 FEKAVKIQPVLNELIHRVAHSYSFLKETL 91
          FEKA+ IQ VLNELIH+VAH + FL +TL
Sbjct: 65 FEKAINIQIVLNELIHKVAHDHMFLTDTL 93




Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375093|gb|EFR22527.1| hypothetical protein AND_15077 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|91085575|ref|XP_968070.1| PREDICTED: similar to glutathione synthetase [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270010046|gb|EFA06494.1| hypothetical protein TcasGA2_TC009391 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|157120878|ref|XP_001653705.1| glutathione synthetase [Aedes aegypti] gi|108874786|gb|EAT39011.1| AAEL009154-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|157120880|ref|XP_001653706.1| glutathione synthetase [Aedes aegypti] gi|108874787|gb|EAT39012.1| AAEL009154-PB [Aedes aegypti] Back     alignment and taxonomy information
>gi|195133180|ref|XP_002011017.1| GI16238 [Drosophila mojavensis] gi|193906992|gb|EDW05859.1| GI16238 [Drosophila mojavensis] Back     alignment and taxonomy information
>gi|195045991|ref|XP_001992066.1| GH24557 [Drosophila grimshawi] gi|193892907|gb|EDV91773.1| GH24557 [Drosophila grimshawi] Back     alignment and taxonomy information
>gi|281361038|ref|NP_001162783.1| glutathione synthetase, isoform G [Drosophila melanogaster] gi|281361047|ref|NP_001162786.1| CG32495, isoform E [Drosophila melanogaster] gi|92109802|gb|ABE73225.1| IP16047p [Drosophila melanogaster] gi|272506148|gb|ACZ95318.1| glutathione synthetase, isoform G [Drosophila melanogaster] gi|272506153|gb|ACZ95320.1| CG32495, isoform E [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|347964000|ref|XP_003437022.1| AGAP000534-PB [Anopheles gambiae str. PEST] gi|333466936|gb|EGK96424.1| AGAP000534-PB [Anopheles gambiae str. PEST] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query93
FB|FBgn0052495 562 CG32495 [Drosophila melanogast 0.946 0.156 0.602 3e-23
FB|FBgn0030882 562 GS "Glutathione Synthetase" [D 0.946 0.156 0.602 3e-23
ZFIN|ZDB-GENE-041010-208 475 gss "glutathione synthetase" [ 0.892 0.174 0.357 7.2e-09
UNIPROTKB|P35668 474 gss "Glutathione synthetase" [ 0.817 0.160 0.376 8.6e-08
WB|WBGene00010941 490 gss-1 [Caenorhabditis elegans 0.827 0.157 0.358 1.4e-06
UNIPROTKB|O22494 546 GSH2 "Glutathione synthetase, 0.516 0.087 0.375 1.2e-05
RGD|2752 474 Gss "glutathione synthetase" [ 0.838 0.164 0.354 1.2e-05
TAIR|locus:2146395 539 GSH2 "glutathione synthetase 2 0.881 0.152 0.310 3.1e-05
DICTYBASE|DDB_G0291756 476 gshB "glutathione synthase" [D 0.849 0.165 0.321 3.3e-05
SGD|S000005409 491 GSH2 "Glutathione synthetase" 0.838 0.158 0.344 4.5e-05
FB|FBgn0052495 CG32495 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 275 (101.9 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 53/88 (60%), Positives = 65/88 (73%)

Query:     4 LNSSIETPLSESVLADIIPKAKDYALMHGAGMRSRTNFSEDSLINAPFALLPSSFPRKEF 63
             L + I  PL+E  L ++  KAKDYA+MHGA MRS+T FS DSL  APF L+PSSFPRKEF
Sbjct:    10 LRNCIRLPLAEDELLEVTAKAKDYAIMHGAAMRSKTAFSPDSLNFAPFVLVPSSFPRKEF 69

Query:    64 EKAVKIQPVLNELIHRVAHSYSFLKETL 91
             EKAV +QP++N L+H VAH   F+  TL
Sbjct:    70 EKAVALQPIINRLMHNVAHDEEFITTTL 97




GO:0004363 "glutathione synthase activity" evidence=ISS
GO:0006750 "glutathione biosynthetic process" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0071722 "detoxification of arsenic-containing substance" evidence=IGI
GO:0006974 "response to DNA damage stimulus" evidence=IMP
FB|FBgn0030882 GS "Glutathione Synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041010-208 gss "glutathione synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|P35668 gss "Glutathione synthetase" [Xenopus laevis (taxid:8355)] Back     alignment and assigned GO terms
WB|WBGene00010941 gss-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|O22494 GSH2 "Glutathione synthetase, chloroplastic" [Solanum lycopersicum (taxid:4081)] Back     alignment and assigned GO terms
RGD|2752 Gss "glutathione synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TAIR|locus:2146395 GSH2 "glutathione synthetase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291756 gshB "glutathione synthase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
SGD|S000005409 GSH2 "Glutathione synthetase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
cd00228 471 cd00228, eu-GS, Eukaryotic Glutathione Synthetase 5e-18
pfam03917 468 pfam03917, GSH_synth_ATP, Eukaryotic glutathione s 8e-18
PLN02977 478 PLN02977, PLN02977, glutathione synthetase 2e-13
TIGR01986 472 TIGR01986, glut_syn_euk, glutathione synthetase, e 2e-13
>gnl|CDD|238140 cd00228, eu-GS, Eukaryotic Glutathione Synthetase (eu-GS); catalyses the production of glutathione from gamma-glutamylcysteine and glycine in an ATP-dependent manner Back     alignment and domain information
 Score = 76.6 bits (189), Expect = 5e-18
 Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)

Query: 11 PLSESVLADIIPKAKDYALMHGAGMRSRTN-FSEDSLINAPFALLPSSFPRKEFEKAVKI 69
          P  +  L ++   A D+A+ +G  MR ++   S     +APF LLPS FP   FE+AV++
Sbjct: 4  PDDKDQLEELAKDANDWAVANGLVMRDKSVQESSVVASHAPFTLLPSPFPEALFEQAVEV 63

Query: 70 QPVLNELIHRVAHSYSFLKETLK 92
          QP  NEL+ R++    FL+++L 
Sbjct: 64 QPDFNELVDRISQDGKFLQQSLS 86


Belongs to the ATP-grasp superfamily. Length = 471

>gnl|CDD|217791 pfam03917, GSH_synth_ATP, Eukaryotic glutathione synthase, ATP binding domain Back     alignment and domain information
>gnl|CDD|215528 PLN02977, PLN02977, glutathione synthetase Back     alignment and domain information
>gnl|CDD|233670 TIGR01986, glut_syn_euk, glutathione synthetase, eukaryotic Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 93
PF03917 370 GSH_synth_ATP: Eukaryotic glutathione synthase, AT 99.96
PLN02977 478 glutathione synthetase 99.95
cd00228 471 eu-GS Eukaryotic Glutathione Synthetase (eu-GS); c 99.95
KOG0021|consensus 468 99.94
TIGR01986 472 glut_syn_euk glutathione synthetase, eukaryotic. T 99.93
PTZ00055 619 glutathione synthetase; Provisional 99.68
>PF03917 GSH_synth_ATP: Eukaryotic glutathione synthase, ATP binding domain; InterPro: IPR005615 This entry represents eukaryotic glutathione synthetase (6 Back     alignment and domain information
Probab=99.96  E-value=1.4e-29  Score=198.55  Aligned_cols=83  Identities=47%  Similarity=0.815  Sum_probs=71.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHhccccccCCCCCC-CC---ccccceeecCCCCcHHHHHHHHHHhHHHHHHHHHHhCChh
Q psy4343          10 TPLSESVLADIIPKAKDYALMHGAGMRSRTNFSE-DS---LINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSYS   85 (93)
Q Consensus        10 ~~l~~~~~~~L~~~a~~wal~hGl~~~~~~~~~~-~~---~~haP~tL~PspfPr~~Fe~A~~vQ~~~N~L~~~Is~D~~   85 (93)
                      .+++++++++|+++|+|||++|||+||++....+ +.   ++||||||+||||||++||+|+++|++||+||||||+|.+
T Consensus         4 ~~l~~~~l~~L~~~a~dwAl~hGl~~r~~~~~~~~~~~~~~~~aP~tL~PspfPr~~Fe~a~~lq~~~N~L~~~is~D~~   83 (370)
T PF03917_consen    4 LPLSEEQLEELVEDAKDWALAHGLLMRPKDSPNSSDVPGVVTHAPFTLFPSPFPRSLFEQAKSLQPLFNELYDRISRDFE   83 (370)
T ss_dssp             CCS-HHHHHHHHHHHHHHHHHTT-EEEETTSTTTTTCCCCEEE--EESS-EEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCeEEecCCCCccCCCccceeeccEEEecCcCCHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence            4789999999999999999999999999765432 22   6899999999999999999999999999999999999999


Q ss_pred             HHHHHhc
Q psy4343          86 FLKETLK   92 (93)
Q Consensus        86 fL~~~l~   92 (93)
                      ||.++|+
T Consensus        84 fL~~~l~   90 (370)
T PF03917_consen   84 FLEETLK   90 (370)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999986



3.2.3 from EC) (GSS), a homodimeric enzyme that catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to phosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis, the first step being catalysed by gamma-glutamylcysteine synthetase []. In humans, defects in GSS are inherited in an autosomal recessive way and are the cause of severe metabolic acidosis, 5-oxoprolinuria, and increased rate of haemolysis and defective function of the central nervous system. ; GO: 0004363 glutathione synthase activity, 0005524 ATP binding, 0006750 glutathione biosynthetic process; PDB: 3KAJ_A 3KAL_A 3KAK_A 2WYO_A 2HGS_A 1M0W_B 1M0T_A.

>PLN02977 glutathione synthetase Back     alignment and domain information
>cd00228 eu-GS Eukaryotic Glutathione Synthetase (eu-GS); catalyses the production of glutathione from gamma-glutamylcysteine and glycine in an ATP-dependent manner Back     alignment and domain information
>KOG0021|consensus Back     alignment and domain information
>TIGR01986 glut_syn_euk glutathione synthetase, eukaryotic Back     alignment and domain information
>PTZ00055 glutathione synthetase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
1m0t_A 491 Yeast Glutathione Synthase Length = 491 5e-06
3kaj_A 499 Apoenzyme Structure Of Homoglutathione Synthetase F 6e-06
2hgs_A 474 Human Glutathione Synthetase Length = 474 3e-04
>pdb|1M0T|A Chain A, Yeast Glutathione Synthase Length = 491 Back     alignment and structure

Iteration: 1

Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%) Query: 11 PLSESVLADIIPKAKDYALMHGAGM---RSRTNFSEDSLINAPFALLPSSFPRKEFEKAV 67 P S+ L ++I + +A+ +G M + N S S+ +P + P+ PRK F++AV Sbjct: 5 PPSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASV--SPVTIYPTPIPRKCFDEAV 62 Query: 68 KIQPVLNELIHRVAHS 83 +IQPV NEL R+ Sbjct: 63 QIQPVFNELYARITQD 78
>pdb|3KAJ|A Chain A, Apoenzyme Structure Of Homoglutathione Synthetase From Glycine Max In Open Conformation Length = 499 Back     alignment and structure
>pdb|2HGS|A Chain A, Human Glutathione Synthetase Length = 474 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query93
1m0w_A 491 Glutathione synthetase; amine/carboxylate ligase, 1e-26
2hgs_A 474 Protein (glutathione synthetase); amine/carboxylat 1e-25
3kal_A 499 Homoglutathione synthetase; dimer, ATP-grAsp domai 2e-25
2wyo_A 562 Glutathione synthetase; ligase, ATP-grAsp; HET: GS 5e-21
>1m0w_A Glutathione synthetase; amine/carboxylate ligase, structural genomics, PSI, protein structure initiative; HET: ANP 3GC; 1.80A {Saccharomyces cerevisiae} SCOP: c.30.1.4 d.142.1.6 PDB: 1m0t_A* Length = 491 Back     alignment and structure
 Score =  100 bits (249), Expect = 1e-26
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 9  ETPLSESVLADIIPKAKDYALMHGAGMRSR-TNFSEDSLINAPFALLPSSFPRKEFEKAV 67
            P S+  L ++I +   +A+ +G  M       +  +   +P  + P+  PRK F++AV
Sbjct: 3  HYPPSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAV 62

Query: 68 KIQPVLNELIHRVAHSYSFLKETLKK 93
          +IQPV NEL  R+    +     L K
Sbjct: 63 QIQPVFNELYARITQDMAQPDSYLHK 88


>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6 Length = 474 Back     alignment and structure
>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A* Length = 499 Back     alignment and structure
>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GSH; 3.15A {Trypanosoma brucei} Length = 562 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
2hgs_A 474 Protein (glutathione synthetase); amine/carboxylat 99.96
3kal_A 499 Homoglutathione synthetase; dimer, ATP-grAsp domai 99.95
1m0w_A 491 Glutathione synthetase; amine/carboxylate ligase, 99.94
2wyo_A 562 Glutathione synthetase; ligase, ATP-grAsp; HET: GS 99.93
>2hgs_A Protein (glutathione synthetase); amine/carboxylate ligase; HET: ADP GSH; 2.10A {Homo sapiens} SCOP: c.30.1.4 d.142.1.6 Back     alignment and structure
Probab=99.96  E-value=2e-30  Score=207.21  Aligned_cols=91  Identities=29%  Similarity=0.362  Sum_probs=83.2

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHhccccc-cCCCCCCCCccccceeecCCCCcHHHHHHHHHHhHHHHHHHHHHh
Q psy4343           3 KLNSSIETPLSESVLADIIPKAKDYALMHGAGMR-SRTNFSEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVA   81 (93)
Q Consensus         3 ~~~~~~p~~l~~~~~~~L~~~a~~wal~hGl~~~-~~~~~~~~~~~haP~tL~PspfPr~~Fe~A~~vQ~~~N~L~~~Is   81 (93)
                      +|..+||++|+++++++|+++|+|||++||++|+ .+.++.+..++|||||||||||||++|++|+++|++||+|||+||
T Consensus         1 ~m~~~~~~~l~~~~~~~l~~~a~dwa~~hGl~~~p~~~~~~~~~~~~aP~tL~PspfPr~~f~~a~~~q~~~n~L~~~vs   80 (474)
T 2hgs_A            1 MATNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVS   80 (474)
T ss_dssp             --CCSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCeEEeccCCCCCCCceEecCEEecCCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            3668999999999999999999999999999999 455556678999999999999999999999999999999999999


Q ss_pred             CChhHHHHHhcC
Q psy4343          82 HSYSFLKETLKK   93 (93)
Q Consensus        82 ~D~~fL~~~l~~   93 (93)
                      +|.+||+++|++
T Consensus        81 ~D~~fL~~~l~~   92 (474)
T 2hgs_A           81 QNAAFLEQTLSS   92 (474)
T ss_dssp             HCHHHHHHHHHT
T ss_pred             cCHHHHHHHHHH
Confidence            999999999864



>3kal_A Homoglutathione synthetase; dimer, ATP-grAsp domain; HET: ADP HGS; 1.90A {Glycine max} PDB: 3kak_A* 3kaj_A* Back     alignment and structure
>1m0w_A Glutathione synthetase; amine/carboxylate ligase, structural genomics, PSI, protein structure initiative; HET: ANP 3GC; 1.80A {Saccharomyces cerevisiae} SCOP: c.30.1.4 d.142.1.6 PDB: 1m0t_A* Back     alignment and structure
>2wyo_A Glutathione synthetase; ligase, ATP-grAsp; HET: GSH; 3.15A {Trypanosoma brucei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 93
d2hgsa4 370 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathio 2e-26
d1m0wa2 373 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathio 5e-26
>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} Length = 370 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Eukaryotic glutathione synthetase ATP-binding domain
domain: Eukaryotic glutathione synthetase ATP-binding domain
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 97.6 bits (243), Expect = 2e-26
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 6  SSIETPLS-ESVLADIIPKAKDYALMHGAGMRSRTN-FSEDSLINAPFALLPSSFPRKEF 63
          ++  + L  +  L ++  +A D AL  G  +R+     S + +  APF L PS  P    
Sbjct: 1  TNWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALL 60

Query: 64 EKAVKIQPVLNELIHRVAHSYSFLKETLKK 93
          E+A  +Q   N L+  V+ + +FL++TL  
Sbjct: 61 EQAYAVQMDFNLLVDAVSQNAAFLEQTLSS 90


>d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 373 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query93
d2hgsa4 370 Eukaryotic glutathione synthetase ATP-binding doma 99.96
d1m0wa2 373 Eukaryotic glutathione synthetase ATP-binding doma 99.95
>d2hgsa4 d.142.1.6 (A:3-201,A:304-474) Eukaryotic glutathione synthetase ATP-binding domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Eukaryotic glutathione synthetase ATP-binding domain
domain: Eukaryotic glutathione synthetase ATP-binding domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96  E-value=6.1e-31  Score=203.24  Aligned_cols=87  Identities=30%  Similarity=0.434  Sum_probs=78.5

Q ss_pred             CCCCCCCH-HHHHHHHHHHHHHHHHhccccccCCCC-CCCCccccceeecCCCCcHHHHHHHHHHhHHHHHHHHHHhCCh
Q psy4343           7 SIETPLSE-SVLADIIPKAKDYALMHGAGMRSRTNF-SEDSLINAPFALLPSSFPRKEFEKAVKIQPVLNELIHRVAHSY   84 (93)
Q Consensus         7 ~~p~~l~~-~~~~~L~~~a~~wal~hGl~~~~~~~~-~~~~~~haP~tL~PspfPr~~Fe~A~~vQ~~~N~L~~~Is~D~   84 (93)
                      .|++.|.+ +++++|+++|+|||++|||+||++.+. +++.++|||||||||||||++|++|+++|++||+|||+||+|.
T Consensus         2 ~~~~~l~d~~~~~~l~~~a~dwa~~hGl~m~~~~~~~~~~~~~~aP~tL~Pspfpr~~F~~a~~vq~~~neL~~~vS~D~   81 (370)
T d2hgsa4           2 NWGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNA   81 (370)
T ss_dssp             CSGGGGSCHHHHHHHHHHHHHHHHHTTCEEECSSCTTCCSSEEECCEESSCCEECHHHHHHHHHTHHHHHHHHHHHHHCH
T ss_pred             CCCccCCCHHHHHHHHHHHHHHHHHcCeeeccCCCCCCCCceeeCCeEecCCcCCHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence            57777755 567999999999999999999997553 4568899999999999999999999999999999999999999


Q ss_pred             hHHHHHhcC
Q psy4343          85 SFLKETLKK   93 (93)
Q Consensus        85 ~fL~~~l~~   93 (93)
                      +||.++|++
T Consensus        82 ~fL~~~l~~   90 (370)
T d2hgsa4          82 AFLEQTLSS   90 (370)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHH
Confidence            999999874



>d1m0wa2 d.142.1.6 (A:6-210,A:324-491) Eukaryotic glutathione synthetase ATP-binding domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure