Psyllid ID: psy4486

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200---
Protein Sequence
MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPEWTKVGGDKGKEEES
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHcccEHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcHHcHHHHHcEcccccEEEcHHccccccccccccccHcccccc
Coil and Loop (DISEMBL)
MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKakkgfmtpeRKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCgthkdwtnadEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLrgkfikptlKKVSKYENKFAKLQKKAAEFNFRNQLKVvkkkeftleeeekekkpewtkvggdkgkeees
Flexible Loop (DISEMBL)
maddaakkakqaeidrkraevrKRMEeaskakkakkgfmtperkkkLRLLLRKKAAEELKKEQERKAAERRRVieqrcgthkdwtnadeatvNKILKELWDRAFKLESEKYDLEIIFRVKEAEITelnaqvndlrgkfikptlkkvsKYENKFAKLQKKaaefnfrnqlkvvkkkeftleeeekekkpewtkvggdkgkeees
Low Complexity Region (SEG)
MaddaakkakqaEIDRKRAEVRKRMEEASkakkakkGFMTPerkkklrlllrkkaaeelkkeqerkaaerrrVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLkvvkkkeftleeeekekkpewtkvGGDKGKEEES
Disordered region (IsUnstruct)
*************************************************************************IEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVV*******************************
Disordered Region (DISOPRED)
*************************************************LLRKKA**************************************KILKELWDRAFKLESEKYDLEIIFRVKEA***************F*****************************************************************
Disordered Region (DISEMBL)
*************************************FMTPERKKKLRLLLRKKAAEE*************RVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEF**************************
Disordered Region (DISPRO)
************************M***S*******GFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEE********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKKAKKGFMTPERKKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIxxxxxxxxxxxxxxxxxxxxxFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPEWTKVGGDKGKEEES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	203	2.2.26 [Sep-21-2011]
P36188	269	Troponin I OS=Drosophila	no	N/A	0.965	0.728	0.767	1e-55
P05547	201	Troponin I OS=Pontastacus	N/A	N/A	0.842	0.850	0.726	3e-54
O44572	194	Troponin I 4 OS=Caenorhab	yes	N/A	0.911	0.953	0.566	9e-44
Q9XUN9	260	Troponin I 3 OS=Caenorhab	no	N/A	0.916	0.715	0.515	3e-36
Q9GYF1	242	Troponin I 2 OS=Caenorhab	no	N/A	0.931	0.780	0.494	2e-35
Q20334	250	Troponin I 1 OS=Caenorhab	no	N/A	0.857	0.696	0.510	2e-32
Q7M3Y3	292	Troponin I OS=Chlamys nip	N/A	N/A	0.438	0.304	0.411	2e-09
Q5PYI0	205	Troponin I, cardiac muscl	yes	N/A	0.911	0.902	0.297	5e-09
P02643	182	Troponin I, fast skeletal	yes	N/A	0.650	0.725	0.306	5e-08
P48788	182	Troponin I, fast skeletal	yes	N/A	0.650	0.725	0.299	8e-08

>sp|P36188|TNNI_DROME Troponin I OS=Drosophila melanogaster GN=wupA PE=2 SV=3

 Score =  216 bits (549), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/198 (76%), Positives = 173/198 (87%), Gaps = 2/198 (1%)

Query: 6   AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER 65
           AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER
Sbjct: 67  AKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQER 126

Query: 66  KAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEIT 125
           KAAERRR+IE+RCG+ ++ ++A E  + +I +E ++R +  E +K+DLE   R K+ EI 
Sbjct: 127 KAAERRRIIEERCGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEIN 186

Query: 126 ELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKE 185
           +LNAQVNDLRGKF+KP LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKE
Sbjct: 187 DLNAQVNDLRGKFVKPALKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKE 246

Query: 186 KKPEWT--KVGGDKGKEE 201
           KKP+W+  K G  K KEE
Sbjct: 247 KKPDWSKGKPGDAKVKEE 264

Troponin I is the ATPase inhibitory subunit of troponin in the thin filament regulatory complex. Involved in the development and maintenance of muscle and nervous system. May also be involved in the cytoskeletal apparatus.
Drosophila melanogaster (taxid: 7227)

>sp|P05547|TNNI_PONLE Troponin I OS=Pontastacus leptodactylus PE=1 SV=1

 Score =  211 bits (536), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 144/172 (83%), Gaps = 1/172 (0%)

Query: 11  QAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAER 70
           Q +IDRK+AEVRKR+EE S  KK KKGFMTPERKKKLRLLLRKKAAEELKKEQERKA ER
Sbjct: 14  QDDIDRKKAEVRKRLEEQS-LKKQKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAGER 72

Query: 71  RRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQ 130
           R++I+QRCG  K+   A+E  +  I+KE +D   ++ES+KYD+E+    K+ EI ELN Q
Sbjct: 73  RKIIDQRCGQPKNLDGANEEQLRAIIKEYFDHTAQIESDKYDVELEIIRKDYEINELNIQ 132

Query: 131 VNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEE 182
           VNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLK VKKKEF LE++
Sbjct: 133 VNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKTVKKKEFELEDD 184

Troponin I is the actomyosin ATPase inhibitory subunit present in the thin filament regulatory complex.

Pontastacus leptodactylus (taxid: 6717)

>sp|O44572|TNNI4_CAEEL Troponin I 4 OS=Caenorhabditis elegans GN=tni-4 PE=2 SV=2

 Score =  176 bits (446), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/189 (56%), Positives = 135/189 (71%), Gaps = 4/189 (2%)

Query: 1   MAD-DAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEEL 59
           M+D DA +  K AE +RK+ EVRKR+EEAS+ KKAKKGF+TPERKKKLR LL  KAAE+L
Sbjct: 1   MSDVDADEARKMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDL 60

Query: 60  KKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRV 119
           K++Q  K  ER+R++++R     D  N D+  +  +  E+ +R   LESE YD+  I R 
Sbjct: 61  KQQQMLKEQERQRILQERIIPLPDLDNEDD--LEAVYDEIRERLIDLESENYDVSYIVRQ 118

Query: 120 KEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFT 178
           K+ EI EL   VNDLRGKF+KPTLKKVSK E KF KL+KK A + +FR QLKVV K EF 
Sbjct: 119 KDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFA 178

Query: 179 LEEEEKEKK 187
           L+EE+ EKK
Sbjct: 179 LDEEDTEKK 187

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9XUN9|TNNI3_CAEEL Troponin I 3 OS=Caenorhabditis elegans GN=tni-3 PE=2 SV=1

 Score =  151 bits (381), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/196 (51%), Positives = 132/196 (67%), Gaps = 10/196 (5%)

Query: 3   DDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKE 62
           DDAA+KA++ E+  K+AEVRKRMEEA+K    KKGF+TPERKKKLR LL  KAAE+LK++
Sbjct: 19  DDAARKAQEREL--KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQ 76

Query: 63  QERKAAERRRVIEQRCGTHKDWTNA-DEATVNKILKELWDRAFKLESEKYDLEIIFRVKE 121
           Q  K  ER++ ++QR     D  +  D+  + KI ++++ R   LE EK+D+       E
Sbjct: 77  QMLKEQERQKTLQQRTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTE 136

Query: 122 AEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEE 181
           AEI +L  QVNDLRGKF+KPTLKKVSKY+NKF    +   + NFRN LKVV KKE  L+E
Sbjct: 137 AEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVV-KKETDLDE 195

Query: 182 EEKEK------KPEWT 191
              +K      KPEW+
Sbjct: 196 IMAKKKGTADGKPEWS 211

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9GYF1|TNNI2_CAEEL Troponin I 2 OS=Caenorhabditis elegans GN=unc-27 PE=2 SV=2

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/196 (49%), Positives = 131/196 (66%), Gaps = 7/196 (3%)

Query: 2   ADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKK 61
            +DA +KA  AE + K+AEVRKR+EEA   KKAKKGF+TPERKKKLR LL  KAAE+LK+
Sbjct: 6   GEDAQRKA--AEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKR 63

Query: 62  EQERKAAERRRVIEQRCGTHKDWTNADE-ATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           +Q  K  ER++ +  R  +  +  + D+   + KI  +LW R  +LE EKYD+  +    
Sbjct: 64  QQLLKEQERQKALADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQT 123

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKKK--E 176
           EAEI  L  +VNDLRGKF+KP+LKKVSKY+NKF K    K   + +FR  LK+VKK   E
Sbjct: 124 EAEINSLTIEVNDLRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKKDVME 183

Query: 177 FTLEEEEKEKKPEWTK 192
             +  ++K+ KP+W+K
Sbjct: 184 AIVNVKKKDDKPDWSK 199

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q20334|TNNI1_CAEEL Troponin I 1 OS=Caenorhabditis elegans GN=tni-1 PE=2 SV=1

 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 122/182 (67%), Gaps = 8/182 (4%)

Query: 2   ADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKK 61
            +DA +KA++ E   K+AEVRKR+EEA + KK KKGF+TPERKKKLR LL  KAAE+LK 
Sbjct: 19  GEDAQRKAQEREA--KKAEVRKRLEEAGQ-KKQKKGFLTPERKKKLRKLLMNKAAEDLKT 75

Query: 62  EQERKAAERRRVIEQRCGTHKDWTNADE-ATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           +Q RK  ER +V+ +R     +  + D+ A +  I  +L+ R   LE EKYD+  I    
Sbjct: 76  QQLRKEQERVKVLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTET 135

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKKE- 176
           E  I +LN +VNDLRGKF+KP+LKKVSKY+NKF K+   +K+    N RN LK VKK+  
Sbjct: 136 ETTINQLNIEVNDLRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTVKKESV 195

Query: 177 FT 178
           FT
Sbjct: 196 FT 197

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q7M3Y3|TNNI_CHLNI Troponin I OS=Chlamys nipponensis akazara PE=1 SV=2

 Score = 62.8 bits (151), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)

Query: 88  DEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVS 147
           D A +  + K+   R   LE + YD E   R ++ EI EL  +VND +GKF+KP L+KV+
Sbjct: 192 DVAALQALCKDFHKRLASLEEDVYDWEAKIRKQDFEINELTLKVNDTKGKFVKPVLRKVN 251

Query: 148 KYENKFAKLQKKAA-EFNFRNQLKVVKKKE 176
           K E+K  K+Q+K A + +FR+ LK  ++ E
Sbjct: 252 KTESKLDKIQRKEAKKSDFRDNLKSSREHE 281

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.

Chlamys nipponensis akazara (taxid: 6571)

>sp|Q5PYI0|TNNI3_HORSE Troponin I, cardiac muscle OS=Equus caballus GN=TNNI3 PE=2 SV=3

 Score = 61.2 bits (147), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 10/195 (5%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MAD +   A      R  A  R    E    KK+K   ++  RK +L+ L+ + A +EL+
Sbjct: 1   MADQSGNAAPPPVRRRSSANYRAYATEPHAKKKSK---ISASRKLQLKTLMLQIAKQELE 57

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           +E   +  E+ R +  RC    +        +  + ++L  R  K++ E+YD+E      
Sbjct: 58  REAVERRGEKGRALSTRC-QPLELAGLGFEELQDLCRQLHARVDKVDEERYDVEAKVTKN 116

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKF--AKLQKKAAE-FNFRNQLKVVKKKEF 177
             EI +LN ++ DLRGKF +PTL++V    +    A L  +A E  + R  LK VKK++ 
Sbjct: 117 ITEIADLNQKIFDLRGKFKRPTLRRVRISADAMMQALLGTRAKETLDLRAHLKQVKKED- 175

Query: 178 TLEEEEKEKKPEWTK 192
              E+E  +  +W K
Sbjct: 176 --TEKENREVGDWRK 188

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.

Equus caballus (taxid: 9796)

>sp|P02643|TNNI2_RABIT Troponin I, fast skeletal muscle OS=Oryctolagus cuniculus GN=TNNI2 PE=1 SV=3

 Score = 57.8 bits (138), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 5/137 (3%)

Query: 43  RKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDR 102
           R++ L+ ++ + AA EL+KE+ R+ AE++  + + C           A V ++ K+L  +
Sbjct: 14  RRQHLKSVMLQIAATELEKEEGRREAEKQNYLAEHCPPLS--LPGSMAEVQELCKQLHAK 71

Query: 103 AFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKL---QKK 159
               E EKYD+EI  +    E+ ++N ++ DLRGKF +P L++V    +   K     K 
Sbjct: 72  IDAAEEEKYDMEIKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKH 131

Query: 160 AAEFNFRNQLKVVKKKE 176
               + R  LK VKK++
Sbjct: 132 KVCMDLRANLKQVKKED 148

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.

Oryctolagus cuniculus (taxid: 9986)

>sp|P48788|TNNI2_HUMAN Troponin I, fast skeletal muscle OS=Homo sapiens GN=TNNI2 PE=1 SV=2

 Score = 57.0 bits (136), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 5/137 (3%)

Query: 43  RKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDR 102
           R++ L+ ++ + AA EL+KE+ R+ AE++  + + C       +  E  V ++ K+L  +
Sbjct: 14  RRQHLKSVMLQIAATELEKEESRREAEKQNYLAEHCPPLHIPGSMSE--VQELCKQLHAK 71

Query: 103 AFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKL---QKK 159
               E EKYD+E+  +    E+ ++N ++ DLRGKF +P L++V    +   K     K 
Sbjct: 72  IDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKH 131

Query: 160 AAEFNFRNQLKVVKKKE 176
               + R  LK VKK++
Sbjct: 132 KVCMDLRANLKQVKKED 148

Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
110671496	203	putative troponin I [Diaphorina citri]	1.0	1.0	1.0	1e-107
328701103	434	PREDICTED: hypothetical protein LOC10016	0.995	0.465	0.787	4e-70
239793611	207	ACYPI005885 [Acyrthosiphon pisum]	0.995	0.975	0.787	9e-70
157127597	207	troponin i [Aedes aegypti] gi|108872894|	0.970	0.951	0.802	2e-68
158293949	210	AGAP001053-PB [Anopheles gambiae str. PE	0.955	0.923	0.809	3e-68
158293947	210	AGAP001053-PA [Anopheles gambiae str. PE	0.955	0.923	0.804	4e-67
157127599	207	troponin i [Aedes aegypti] gi|108872895|	0.970	0.951	0.786	2e-66
225346695	213	troponin I transcript variant C [Bombyx	0.995	0.948	0.761	2e-66
157127585	203	troponin i [Aedes aegypti] gi|108872888|	0.990	0.990	0.778	3e-66
157127583	207	troponin i [Aedes aegypti] gi|108872887|	0.970	0.951	0.786	4e-66

>gi|110671496|gb|ABG81999.1| putative troponin I [Diaphorina citri]

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK
Sbjct: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDKGKEEES 203
           EEEKEKKPEWTKVGGDKGKEEES
Sbjct: 181 EEEKEKKPEWTKVGGDKGKEEES 203

Source: Diaphorina citri

Species: Diaphorina citri

Genus: Diaphorina

Family: Psyllidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328701103|ref|XP_001947440.2| PREDICTED: hypothetical protein LOC100164905 [Acyrthosiphon pisum]

 Score =  269 bits (688), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/202 (78%), Positives = 181/202 (89%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTP+RKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPDRKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A E T+ +++KE +DR  KLE +K+DLE + + K
Sbjct: 61  KEQERKAAERRRIIEERCGQPKNIDDAGEDTIKRVIKEYYDRITKLEDQKFDLEYVVKKK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI+ELN+QVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DFEISELNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDKGKEEE 202
           EE+KEKKP+W+K G +K  E E
Sbjct: 181 EEDKEKKPDWSKKGDEKKGEGE 202

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239793611|dbj|BAH72914.1| ACYPI005885 [Acyrthosiphon pisum]

 Score =  268 bits (685), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 159/202 (78%), Positives = 182/202 (90%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTP+RKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPDRKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A E T+ +++KE +DR  KLE +K+DLE + + K
Sbjct: 61  KEQERKAAERRRIIEERCGQPKNIDDAGEDTIKRVIKEYYDRITKLEDQKFDLEYVVKKK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI+ELN+QVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DFEISELNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDKGKEEE 202
           EE+KEKKP+W+K G +K  +EE
Sbjct: 181 EEDKEKKPDWSKKGDEKKVKEE 202

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127597|ref|XP_001661108.1| troponin i [Aedes aegypti] gi|108872894|gb|EAT37119.1| AAEL010850-PH [Aedes aegypti]

 Score =  263 bits (673), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/197 (80%), Positives = 178/197 (90%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+EA +  I++E W+R F LE +KYDLE   ++K
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNIEDANEAELQTIVREYWNRMFLLEGDKYDLERGEKLK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 QFEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDK 197
           EE+KEKKP+W+K G  K
Sbjct: 181 EEDKEKKPDWSKKGDSK 197

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293949|ref|XP_001688627.1| AGAP001053-PB [Anopheles gambiae str. PEST] gi|78101794|tpg|DAA05512.1| TPA_inf: troponin I isoform 6b2 [Anopheles gambiae str. PEST] gi|157016468|gb|EDO63968.1| AGAP001053-PB [Anopheles gambiae str. PEST]

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/194 (80%), Positives = 176/194 (90%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+EA +  I KE W+R F LE +K+DLE   ++K
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNVEDANEAELQTICKEYWNRVFGLEGDKFDLERTEKLK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 QYEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVG 194
           EE+KEKKP+W+K G
Sbjct: 181 EEDKEKKPDWSKKG 194

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158293947|ref|XP_315309.4| AGAP001053-PA [Anopheles gambiae str. PEST] gi|347965039|ref|XP_003437190.1| AGAP001053-PE [Anopheles gambiae str. PEST] gi|78101793|tpg|DAA05511.1| TPA_inf: troponin I isoform 6a1 [Anopheles gambiae str. PEST] gi|157016467|gb|EAA44285.4| AGAP001053-PA [Anopheles gambiae str. PEST] gi|333469362|gb|EGK97269.1| AGAP001053-PE [Anopheles gambiae str. PEST]

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 156/194 (80%), Positives = 173/194 (89%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+E    KIL++   R   LE EKYDLE + + K
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNVEDANEDQARKILRDYHQRINSLEEEKYDLEYVVKRK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DMEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVG 194
           EE+KEKKP+W+K G
Sbjct: 181 EEDKEKKPDWSKKG 194

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127599|ref|XP_001661109.1| troponin i [Aedes aegypti] gi|108872895|gb|EAT37120.1| AAEL010850-PA [Aedes aegypti]

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/197 (78%), Positives = 175/197 (88%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+E  + K+L++   R   LE EK+DLE + + K
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNIEDANEEQIRKVLRDYHARINALEEEKFDLEYVVKRK 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DFEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDK 197
           EE+KEKKP+W+K G  K
Sbjct: 181 EEDKEKKPDWSKKGDSK 197

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|225346695|gb|ACN86370.1| troponin I transcript variant C [Bombyx mandarina]

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/210 (76%), Positives = 181/210 (86%), Gaps = 8/210 (3%)

Query: 1   MADDA------AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKK 54
           MADD       AKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKK
Sbjct: 1   MADDEKKRLEEAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKK 60

Query: 55  AAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLE 114
           AAEELKKEQERKAAERRR+IE+RCG  K+  +A+E T+ ++ K+  +R  +LE EK+DLE
Sbjct: 61  AAEELKKEQERKAAERRRIIEERCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLE 120

Query: 115 IIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKK 174
            I + K+ EI++LN+QVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKK
Sbjct: 121 YIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKK 180

Query: 175 KEFTLEEEEKEKKPEWT--KVGGDKGKEEE 202
           KEFTLEEE+KEKKP+W+  K G  K KEEE
Sbjct: 181 KEFTLEEEDKEKKPDWSKGKPGDQKVKEEE 210

Source: Bombyx mandarina

Species: Bombyx mandarina

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127585|ref|XP_001661102.1| troponin i [Aedes aegypti] gi|108872888|gb|EAT37113.1| AAEL010850-PC [Aedes aegypti]

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/203 (77%), Positives = 179/203 (88%), Gaps = 2/203 (0%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+E  +  I+KE +DR +  E +K+DLE   R +
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNIEDANEDVLRDIVKEYFDRMYTCEGQKWDLEFEVRKR 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DWEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDKGKEEES 203
           EE+KEKKP+W+K G    KEEE+
Sbjct: 181 EEDKEKKPDWSKKGD--SKEEEA 201

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157127583|ref|XP_001661101.1| troponin i [Aedes aegypti] gi|108872887|gb|EAT37112.1| AAEL010850-PF [Aedes aegypti]

 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/197 (78%), Positives = 175/197 (88%)

Query: 1   MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60
           MADD AKKAKQAEI+RKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK
Sbjct: 1   MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELK 60

Query: 61  KEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVK 120
           KEQERKAAERRR+IE+RCG  K+  +A+E  +  I+KE +DR +  E +K+DLE   R +
Sbjct: 61  KEQERKAAERRRIIEERCGKPKNIEDANEDVLRDIVKEYFDRMYTCEGQKWDLEFEVRKR 120

Query: 121 EAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180
           + EI++LNAQVNDLRGKF+KPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE
Sbjct: 121 DWEISDLNAQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLE 180

Query: 181 EEEKEKKPEWTKVGGDK 197
           EE+KEKKP+W+K G  K
Sbjct: 181 EEDKEKKPDWSKKGDSK 197

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	203
FB|FBgn0004028	269	wupA "wings up A" [Drosophila	0.773	0.583	0.515	5.7e-36
WB|WBGene00006586	194	tni-4 [Caenorhabditis elegans	0.467	0.489	0.489	3.9e-24
WB|WBGene00006764	242	unc-27 [Caenorhabditis elegans	0.403	0.338	0.511	6.9e-23
WB|WBGene00006585	260	tni-3 [Caenorhabditis elegans	0.403	0.315	0.5	8.8e-23
WB|WBGene00006584	250	tni-1 [Caenorhabditis elegans	0.768	0.624	0.366	4e-19
UNIPROTKB|P02643	182	TNNI2 "Troponin I, fast skelet	0.280	0.313	0.385	2.8e-06
UNIPROTKB|I3LLI0	211	TNNI3 "Uncharacterized protein	0.280	0.270	0.385	3.9e-06
UNIPROTKB|P08057	212	TNNI3 "Troponin I, cardiac mus	0.280	0.268	0.385	4e-06
UNIPROTKB|I3L6R0	212	TNNI3 "Uncharacterized protein	0.280	0.268	0.385	4e-06
ZFIN|ZDB-GENE-040625-119	176	tnni2a.4 "troponin I, skeletal	0.256	0.295	0.423	5.5e-06

FB|FBgn0004028 wupA "wings up A" [Drosophila melanogaster (taxid:7227)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 81/157 (51%), Positives = 100/157 (63%)

Query:    13 EIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
             EI+RKRAEVRKRMEEAS       GFMTP                               
Sbjct:    74 EIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRR 133

Query:    73 VIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVN 132
             +IE+RCG+ ++ ++A E  + +I +E ++R +  E +K+DLE   R K+ EI +LNAQVN
Sbjct:   134 IIEERCGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEINDLNAQVN 193

Query:   133 DLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 169
             DLRGKF+KP LKKVSKYENKFAKLQKKAAEFNFRNQL
Sbjct:   194 DLRGKFVKPALKKVSKYENKFAKLQKKAAEFNFRNQL 230

GO:0046716 "muscle cell homeostasis" evidence=IMP

GO:0007399 "nervous system development" evidence=NAS;IMP

GO:0007517 "muscle organ development" evidence=NAS;IMP

GO:0007519 "skeletal muscle tissue development" evidence=IMP

GO:0005861 "troponin complex" evidence=IEA;NAS

GO:0003779 "actin binding" evidence=NAS

GO:0005523 "tropomyosin binding" evidence=NAS

GO:0045214 "sarcomere organization" evidence=IMP

GO:0030239 "myofibril assembly" evidence=IMP

GO:0048738 "cardiac muscle tissue development" evidence=IMP

GO:0007507 "heart development" evidence=IMP

GO:0000280 "nuclear division" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

WB|WBGene00006586 tni-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 212 (79.7 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 48/98 (48%), Positives = 63/98 (64%)

Query:    73 VIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVN 132
             ++++R     D  N D+  +  +  E+ +R   LESE YD+  I R K+ EI EL   VN
Sbjct:    74 ILQERIIPLPDLDNEDD--LEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVN 131

Query:   133 DLRGKFIKPTLKKVSKYENKFAKLQKK-AAEFNFRNQL 169
             DLRGKF+KPTLKKVSK E KF KL+KK A + +FR QL
Sbjct:   132 DLRGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQL 169

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0043050 "pharyngeal pumping" evidence=IMP

GO:0030017 "sarcomere" evidence=IDA

GO:0030172 "troponin C binding" evidence=IPI

WB|WBGene00006764 unc-27 [Caenorhabditis elegans (taxid:6239)]

 Score = 205 (77.2 bits), Expect = 6.9e-23, Sum P(2) = 6.9e-23
 Identities = 43/84 (51%), Positives = 56/84 (66%)

Query:    88 DEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVS 147
             D+  + KI  +LW R  +LE EKYD+  +    EAEI  L  +VNDLRGKF+KP+LKKVS
Sbjct:    91 DKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPSLKKVS 150

Query:   148 KYENKFAKL-QKKAA-EFNFRNQL 169
             KY+NKF K  + KA  + +FR  L
Sbjct:   151 KYDNKFKKSGESKAGTKEDFRANL 174

GO:0040011 "locomotion" evidence=IMP

GO:0030421 "defecation" evidence=IMP

GO:0045214 "sarcomere organization" evidence=IMP

GO:0030017 "sarcomere" evidence=IDA

GO:0030172 "troponin C binding" evidence=IPI

WB|WBGene00006585 tni-3 [Caenorhabditis elegans (taxid:6239)]

 Score = 201 (75.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
 Identities = 41/82 (50%), Positives = 54/82 (65%)

Query:    88 DEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVS 147
             D+  + KI ++++ R   LE EK+D+       EAEI +L  QVNDLRGKF+KPTLKKVS
Sbjct:   103 DQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVS 162

Query:   148 KYENKFAKLQKKAAEFNFRNQL 169
             KY+NKF    +   + NFRN L
Sbjct:   163 KYDNKFKSSGEVKEKSNFRNNL 184

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0030421 "defecation" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040032 "post-embryonic body morphogenesis" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0006936 "muscle contraction" evidence=IMP

GO:0030017 "sarcomere" evidence=IDA

GO:0030172 "troponin C binding" evidence=IPI

GO:0030016 "myofibril" evidence=IDA

WB|WBGene00006584 tni-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 59/161 (36%), Positives = 80/161 (49%)

Query:    13 EIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 72
             E + K+AEVRKR+EEA        GF+TP                               
Sbjct:    28 EREAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVK 86

Query:    73 VIEQRCGTHKDWTNADE-ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQV 131
             V+ +R     +  + D+ A +  I  +L+ R   LE EKYD+  I    E  I +LN +V
Sbjct:    87 VLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEV 146

Query:   132 NDLRGKFIKPTLKKVSKYENKFAKL---QKKAAEFNFRNQL 169
             NDLRGKF+KP+LKKVSKY+NKF K+   +K+    N RN L
Sbjct:   147 NDLRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNL 187

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0007409 "axonogenesis" evidence=IMP

GO:0030421 "defecation" evidence=IMP

GO:0043057 "backward locomotion" evidence=IMP

GO:0005862 "muscle thin filament tropomyosin" evidence=IDA

GO:0030172 "troponin C binding" evidence=IPI

UNIPROTKB|P02643 TNNI2 "Troponin I, fast skeletal muscle" [Oryctolagus cuniculus (taxid:9986)]

 Score = 108 (43.1 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query:    90 ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
             A V ++ K+L  +    E EKYD+EI  +    E+ ++N ++ DLRGKF +P L++V
Sbjct:    59 AEVQELCKQLHAKIDAAEEEKYDMEIKVQKSSKELEDMNQKLFDLRGKFKRPPLRRV 115

GO:0031014 "troponin T binding" evidence=IPI

UNIPROTKB|I3LLI0 TNNI3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 109 (43.4 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query:    90 ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
             A +  + ++L  R  K++ E+YD+E        EI +LN ++ DLRGKF +PTL++V
Sbjct:    92 AELQDLCRQLHARVDKVDEERYDVEAKVTKNITEIADLNQKIFDLRGKFKRPTLRRV 148

GO:0005861 "troponin complex" evidence=IEA

UNIPROTKB|P08057 TNNI3 "Troponin I, cardiac muscle" [Bos taurus (taxid:9913)]

 Score = 109 (43.4 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query:    90 ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
             A +  + ++L  R  K++ E+YD+E        EI +LN ++ DLRGKF +PTL++V
Sbjct:    93 AELQDLCRQLHARVDKVDEERYDVEAKVTKNITEIADLNQKIFDLRGKFKRPTLRRV 149

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA

GO:0048306 "calcium-dependent protein binding" evidence=IEA

GO:0032780 "negative regulation of ATPase activity" evidence=IEA

GO:0031014 "troponin T binding" evidence=IEA

GO:0030172 "troponin C binding" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0019855 "calcium channel inhibitor activity" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0005861 "troponin complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0001980 "regulation of systemic arterial blood pressure by ischemic conditions" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|I3L6R0 TNNI3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 109 (43.4 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query:    90 ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
             A +  + ++L  R  K++ E+YD+E        EI +LN ++ DLRGKF +PTL++V
Sbjct:    92 AELQDLCRQLHARVDKVDEERYDVEAKVTKNITEIADLNQKIFDLRGKFKRPTLRRV 148

GO:0060048 "cardiac muscle contraction" evidence=IEA

GO:0055010 "ventricular cardiac muscle tissue morphogenesis" evidence=IEA

GO:0048306 "calcium-dependent protein binding" evidence=IEA

GO:0032780 "negative regulation of ATPase activity" evidence=IEA

GO:0031014 "troponin T binding" evidence=IEA

GO:0030172 "troponin C binding" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0019855 "calcium channel inhibitor activity" evidence=IEA

GO:0006937 "regulation of muscle contraction" evidence=IEA

GO:0006874 "cellular calcium ion homeostasis" evidence=IEA

GO:0005861 "troponin complex" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0001980 "regulation of systemic arterial blood pressure by ischemic conditions" evidence=IEA

GO:0001570 "vasculogenesis" evidence=IEA

ZFIN|ZDB-GENE-040625-119 tnni2a.4 "troponin I, skeletal, fast 2a.4" [Danio rerio (taxid:7955)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query:    95 ILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
             + K+L  +  K++ E+YD+E      + EI +L  +V DL+GKF KP LKKV
Sbjct:    60 LCKKLHQQIDKVDEERYDMEAKVAKADKEIEDLKVKVIDLKGKFKKPALKKV 111

GO:0005861 "troponin complex" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0030239 "myofibril assembly" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8MKD5	TNNI3_CANFA	No assigned EC number	0.3035	0.7931	0.7630	yes	N/A
P02643	TNNI2_RABIT	No assigned EC number	0.3065	0.6502	0.7252	yes	N/A
P36188	TNNI_DROME	No assigned EC number	0.7676	0.9655	0.7286	no	N/A
P02646	TNNI3_RABIT	No assigned EC number	0.3041	0.9064	0.8720	yes	N/A
P05547	TNNI_PONLE	No assigned EC number	0.7267	0.8423	0.8507	N/A	N/A
P23693	TNNI3_RAT	No assigned EC number	0.3034	0.9113	0.8767	yes	N/A
O44572	TNNI4_CAEEL	No assigned EC number	0.5661	0.9113	0.9536	yes	N/A
P48787	TNNI3_MOUSE	No assigned EC number	0.3034	0.9113	0.8767	yes	N/A
Q5PYI0	TNNI3_HORSE	No assigned EC number	0.2974	0.9113	0.9024	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	203
pfam00992	131	pfam00992, Troponin, Troponin	5e-24

>gnl|CDD|201540 pfam00992, Troponin, Troponin

 Score = 91.5 bits (228), Expect = 5e-24
 Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 5/133 (3%)

Query: 44  KKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRA 103
           K+ L+ LL  KAAEEL+ EQ +K  E+ + + +RC   +       A + ++ K+L  R 
Sbjct: 1   KRHLKSLLLLKAAEELEFEQRKKEEEKEKYLAERCPPLRLS--LSRAELQELCKKLHARI 58

Query: 104 FKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYENKFAKL---QKKA 160
            +L+ E+YD+E     K+ EI +L  +VNDLRGKF KPTLKKV K  +   K     K  
Sbjct: 59  DRLDEERYDIEEKVAKKDKEIEDLKKKVNDLRGKFKKPTLKKVRKSADAMLKALLGSKHK 118

Query: 161 AEFNFRNQLKVVK 173
              + R  LK VK
Sbjct: 119 VSMDLRANLKQVK 131

Troponin (Tn) contains three subunits, Ca2+ binding (TnC), inhibitory (TnI), and tropomyosin binding (TnT). this Pfam contains members of the TnT subunit. Troponin is a complex of three proteins, Ca2+ binding (TnC), inhibitory (TnI), and tropomyosin binding (TnT). The troponin complex regulates Ca++ induced muscle contraction. This family includes troponin T and troponin I. Troponin I binds to actin and troponin T binds to tropomyosin. Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	203
KOG3977|consensus	221		100.0
PF00992	132	Troponin: Troponin; InterPro: IPR001978 The tropon	100.0
KOG3634|consensus	361		99.68
PF00992	132	Troponin: Troponin; InterPro: IPR001978 The tropon	85.77

>KOG3977|consensus

Probab=100.00  E-value=1.5e-62  Score=415.45  Aligned_cols=199  Identities=45%  Similarity=0.618  Sum_probs=183.5

Q ss_pred             CCcHHHHHHHHHHHHHhHHHHHHhhHHHHHhhhhcCCCCChHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy4486           1 MADDAAKKAKQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGT   80 (203)
Q Consensus         1 ~~~~~~~~r~~~E~~rk~aE~rkR~eE~~~kkKakk~kms~~RK~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER~~P   80 (203)
                      |.|.++++|+++++++++||+|+|++|++..+++++||+||+|+++|++|||++|+++|++++..+++||.+||++|+.|
T Consensus         1 ~~dg~~~~rka~~re~kk~evrkrleeA~~~~~~KKgfltpeRKkkLrkLlm~kAaedLkqqq~~kEqErqr~LaeR~i~   80 (221)
T KOG3977|consen    1 EVDGDDAARKAQEREAKKAEVRKRLEEAGMPKKEKKGFLTPERKKKLRKLLMQKAAEDLKQQQELKEQERQRYLAERTIP   80 (221)
T ss_pred             CCccchhhhhccchhHHHHHHHHHHHHhcccchhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            57888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCH-HHHHHHHHHHHHHHHhhhhhhhcHHHHHhhhhhHHHHHHHHHHHhhcCCCCcchhhhhcchH-HHHHH--
Q psy4486          81 HKDWTNADE-ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYEN-KFAKL--  156 (203)
Q Consensus        81 l~~idgLs~-~~Lqe~ckELh~~I~~lEeErYDlE~Kv~kq~~EI~eL~~kV~DLrGKfkkP~LkkV~~sa~-~~~~l--  156 (203)
                      |||+|+++. ..|+++|++||.+|+.||+|+|||+++|.++..||++|+|+||||+|||++|+|++||+|++ |+.++  
T Consensus        81 lp~~d~l~d~g~Lq~ly~~l~arv~~leEEkYDi~~~v~qt~~EIndLtikvnDLRGKFvkPtLkkVsks~~kf~ka~~~  160 (221)
T KOG3977|consen   81 LPDVDSLDDRGLLQDLYRELHARVDALEEEKYDIEAKVTQTETEINDLTIKVNDLRGKFVKPTLKKVSKSADKFLKALLG  160 (221)
T ss_pred             CCCCCcccchHHHHHHHHHHHHHHHHHHHhhcchhheeehhhhhHHHHHHHHHHhcccccCccHHHHHhhhHHHHHHhhc
Confidence            999999886 66999999999999999999999999999999999999999999999999999999999994 44555  


Q ss_pred             hhhhhccchhhhccccccchhhhhH--HhhhcccccccccCCccc
Q psy4486         157 QKKAAEFNFRNQLKVVKKKEFTLEE--EEKEKKPEWTKVGGDKGK  199 (203)
Q Consensus       157 ~k~~~~~d~RanLK~VkKe~~~~~e--~~~~~~~dWrkn~e~k~~  199 (203)
                      ++|+++||||||||+|||+++..+.  +.+.+||||||||+...+
T Consensus       161 ~k~~~k~DlRanLK~VKKed~~~e~~~kkk~ek~dW~K~~~~~~~  205 (221)
T KOG3977|consen  161 SKHKVKMDLRANLKQVKKEDTEKERPNKKKREKGDWRKNIEPESG  205 (221)
T ss_pred             cchhhhHHHHHHHHHhhhhhHHHhhhhhhcccchhhhhccCcccc
Confidence            3689999999999999999764332  234689999999988654

>PF00992 Troponin: Troponin; InterPro: IPR001978 The troponin (Tn) complex regulates Ca2+ induced muscle contraction

Probab=100.00  E-value=6.7e-42  Score=274.72  Aligned_cols=129  Identities=43%  Similarity=0.541  Sum_probs=120.7

Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcHHHHHhhhhhH
Q psy4486          44 KKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAE  123 (203)
Q Consensus        44 K~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDlE~Kv~kq~~E  123 (203)
                      |++|++||+.+|..++..++..+++++.+||++||||+ +|||+|.++|+++|++||++|+.||+|+||+|++|.+++||
T Consensus         1 K~~lK~L~~~kA~~el~~e~~~keeek~~~L~eri~~l-~~~g~~~~eL~~~~k~lh~ri~~leeEryd~E~kv~k~~~E   79 (132)
T PF00992_consen    1 KRMLKDLLLLKAKIELHFEQRKKEEEKRRYLAERIPPL-KLDGLSRAELQELCKELHERIDKLEEERYDLEEKVAKQDYE   79 (132)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCTSS---GTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            46899999999999999999999999999999999999 69999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCcchhhhhcch-HHHHHH--hhhhhccchhhhccccc
Q psy4486         124 ITELNAQVNDLRGKFIKPTLKKVSKYE-NKFAKL--QKKAAEFNFRNQLKVVK  173 (203)
Q Consensus       124 I~eL~~kV~DLrGKfkkP~LkkV~~sa-~~~~~l--~k~~~~~d~RanLK~Vk  173 (203)
                      |++|+++|+|++|+|+||+||+|++|+ +|..++  .+|.+++|||+|||+|+
T Consensus        80 i~elk~kv~d~rgkfkkp~lkkvkk~~~~~~~~~l~~k~~~~~~lr~~lK~vk  132 (132)
T PF00992_consen   80 IEELKKKVNDLRGKFKKPTLKKVKKSADAMRRKLLGIKHKVSMDLRANLKEVK  132 (132)
T ss_dssp             HHHHCCCCCCCCCSHCCHHHHHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHcccccchHHHHHHHHHHHHHHhhhCcccccHHHHHHHhhccC
Confidence            999999999999999999999999999 454444  37899999999999996

Tn contains three subunits, Ca2+ binding (TnC), inhibitory (TnI), and tropomyosin binding (TnT). This family includes troponin T and troponin I. Troponin I binds to actin and troponin T binds to tropomyosin [, , ].; PDB: 1J1D_C 1MXL_I 1LXF_I 2KRD_I 1J1E_F 2L1R_B 2KGB_I 1YTZ_I 1YV0_I 1VDJ_A ....

>KOG3634|consensus

Probab=99.68  E-value=3.5e-16  Score=141.99  Aligned_cols=100  Identities=23%  Similarity=0.305  Sum_probs=78.2

Q ss_pred             cCCCCChHHHhhhHHHHHHHH--HHHHHH-HHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhh
Q psy4486          35 KKGFMTPERKKKLRLLLRKKA--AEELKK-EQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKY  111 (203)
Q Consensus        35 kk~kms~~RK~~LksllL~kA--~~~L~k-Ek~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErY  111 (203)
                      .+++.|-+-+..-.+.+..++  ..+.+- ..++..+.|..+|+.|..|| +||+|+.++|++++++||++|++|+.++|
T Consensus       176 ~gknftvakk~a~~~~fgn~~qak~e~~mtKeQqEdakk~~l~aiRkk~~-~~~~~~e~~LkeKiKELhqrI~kLE~EKy  254 (361)
T KOG3634|consen  176 AGKNFTVAKKGAQNDGFGNIVQAKQEMGMTKEQQEDAKKKFLLAIRKKPL-NISELPENDLKEKIKELHQRICKLETEKY  254 (361)
T ss_pred             ccCcceeecccccchhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhccc-ccccCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence            445555554432234444443  233332 34556688888899999888 99999999999999999999999999999


Q ss_pred             cHHHHHhhhhhHHHHHHHHHHHhh
Q psy4486         112 DLEIIFRVKEAEITELNAQVNDLR  135 (203)
Q Consensus       112 DlE~Kv~kq~~EI~eL~~kV~DLr  135 (203)
                      ||+.+..+|+|+|++|+.|+.+.+
T Consensus       255 DLekR~eRQeYDlkeL~eRqrq~~  278 (361)
T KOG3634|consen  255 DLEKRHERQEYDLKELNERQRQVQ  278 (361)
T ss_pred             hHHHHHHhhhccHHHHHHHHHHHH
Confidence            999999999999999999998764

>PF00992 Troponin: Troponin; InterPro: IPR001978 The troponin (Tn) complex regulates Ca2+ induced muscle contraction

Probab=85.77  E-value=1  Score=36.44  Aligned_cols=37  Identities=11%  Similarity=-0.011  Sum_probs=32.2

Q ss_pred             HHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHH
Q psy4486          63 QERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELW  100 (203)
Q Consensus        63 k~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh  100 (203)
                      +.+....+..+++.+..|| +++|++..+|++.++++|
T Consensus        96 kp~lkkvkk~~~~~~~~~l-~~k~~~~~~lr~~lK~vk  132 (132)
T PF00992_consen   96 KPTLKKVKKSADAMRRKLL-GIKHKVSMDLRANLKEVK  132 (132)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-CTTCSHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhhh-CcccccHHHHHHHhhccC
Confidence            4456667788999999888 999999999999999987

Tn contains three subunits, Ca2+ binding (TnC), inhibitory (TnI), and tropomyosin binding (TnT). This family includes troponin T and troponin I. Troponin I binds to actin and troponin T binds to tropomyosin [, , ].; PDB: 1J1D_C 1MXL_I 1LXF_I 2KRD_I 1J1E_F 2L1R_B 2KGB_I 1YTZ_I 1YV0_I 1VDJ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	203
1j1e_C	180	Crystal Structure Of The 52kda Domain Of Human Card		1e-04
1j1d_C	133	Crystal Structure Of The 46kda Domain Of Human Card		2e-04

>pdb|1J1E|C Chain C, Crystal Structure Of The 52kda Domain Of Human Cardiac Troponin In The Ca2+ Saturated Form Length = 180

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 90  ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
           A +  + ++L  R  K++ E+YD+E        EI +L  ++ DLRGKF +PTL++V
Sbjct: 61  AELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRV 117

>pdb|1J1D|C Chain C, Crystal Structure Of The 46kda Domain Of Human Cardiac Troponin In The Ca2+ Saturated Form Length = 133

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 90  ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKV 146
           A +  + ++L  R  K++ E+YD+E        EI +L  ++ DLRGKF +PTL++V
Sbjct: 61  AELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRV 117

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	203
1ytz_I	182	Troponin I; muscle, THIN filament, actin binding,	1e-25
1j1e_C	180	Troponin I, TNI; THIN filament, muscle regulation,	1e-24
1j1d_C	133	Troponin I, TNI; THIN filament, muscle regulation,	5e-22
1ytz_T	107	Troponin T; muscle, THIN filament, actin binding,	6e-06
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	3e-04

>1ytz_I Troponin I; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.2 PDB: 2w49_2 2w4u_2 1yv0_I 1vdi_A 1vdj_A Length = 182

 Score = 96.5 bits (240), Expect = 1e-25
 Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 6/174 (3%)

Query: 31  AKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEA 90
           + + KK      R++ L+  + + A  E++KE   K  E++  + +              
Sbjct: 1   SDEEKKRRAATARRQHLKSAMLQLAVTEIEKEAAAKEVEKQNYLAEHSPPLSL--PGSMQ 58

Query: 91  TVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYE 150
            + ++ K+L  +   ++ E+YD E+  +    E+ +L+ ++ DLRGKF +P L++V    
Sbjct: 59  ELQELSKKLHAKIDSVDEERYDTEVKLQKTNKELEDLSQKLFDLRGKFKRPPLRRVRMSA 118

Query: 151 NKFAKL---QKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPEWTKVGGDKGKEE 201
           +   +     K     + R  LK V KKE T +E++     +W K   +K   E
Sbjct: 119 DAMLRALLGSKHKVNMDLRANLKQV-KKEDTEKEKDLRDVGDWRKNIEEKSGME 171

>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2 Length = 180

 Score = 94.3 bits (234), Expect = 1e-24
 Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 7/175 (4%)

Query: 30  KAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADE 89
           +    KK  ++  RK +L+ LL + A +EL++E E +  E+ R +  R     +      
Sbjct: 2   EPHAKKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRAQP-LELAGLGF 60

Query: 90  ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKY 149
           A +  + ++L  R  K++ E+YD+E        EI +L  ++ DLRGKF +PTL++V   
Sbjct: 61  AELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRIS 120

Query: 150 ENKFAKL---QKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPEWTKVGGDKGKEE 201
            +   +     +     + R  LK VKK++    E+E  +  +W K        E
Sbjct: 121 ADAMMQALLGARAKESLDLRAHLKQVKKED---TEKENREVGDWRKNIDALSGME 172

>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2 Length = 133

 Score = 86.1 bits (213), Expect = 5e-22
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 30  KAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADE 89
           +    KK  ++  RK +L+ LL + A +EL++E E +  E+ R +  R     +      
Sbjct: 2   EPHAKKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRAQP-LELAGLGF 60

Query: 90  ATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSK 148
           A +  + ++L  R  K++ E+YD+E        EI +L  ++ DLRGKF +PTL++V  
Sbjct: 61  AELQDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRI 119

>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1 Length = 107

 Score = 42.6 bits (100), Expect = 6e-06
 Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 54  KAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDL 113
             A++ + +++     +++V+ +R     +  + +E  +    KELWD  ++L++EKYD 
Sbjct: 10  AKADQKRGKKQTARETKKKVLAERRKP-LNIDHLNEDKLRDKAKELWDWLYQLQTEKYDF 68

Query: 114 EIIFRVKEAEITELNAQVNDLRGKFIKPTLKK 145
               + K+ EI  L  +++  +    K   K 
Sbjct: 69  AEQIKRKKYEIVTLRNRIDQAQKHSKKAGAKG 100

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 30/184 (16%), Positives = 58/184 (31%), Gaps = 13/184 (7%)

Query: 16   RKRAEVRKRMEEA-SKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVI 74
            ++   VRKR +         +        + K +++LR+  +  ++K   R    R    
Sbjct: 826  QRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHV-RGWLARVHYH 884

Query: 75   EQRCGTHKDWTNADEATVNKILKEL---WDRAFKLESEKYDLEIIFRVKEAEITELNAQV 131
                               + LK+L        + +     LE      + +I E N + 
Sbjct: 885  RTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEY 944

Query: 132  NDLRGKFIKPTLKKV---SKYENKFAKLQKKAAEF-NFRNQLKV----VKKKEFTLEEEE 183
              L  K     +       K  +   +L+    E  N  N++      + K    L + +
Sbjct: 945  KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQ 1004

Query: 184  KEKK 187
             EKK
Sbjct: 1005 TEKK 1008

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 6/178 (3%)

Query: 10   KQAEIDRKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAE 69
            ++ E+  K  E+++  E   KA+   K     E+K       +    E+L+ E E  A  
Sbjct: 855  QEEEMQAKDEELQRTKERQQKAEAELKEL---EQKHTQLCEEKNLLQEKLQAETELYAEA 911

Query: 70   RRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNA 129
                   R    K         +   ++E  +R+ +L++EK  ++      E ++ E  A
Sbjct: 912  EEMR--VRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEA 969

Query: 130  QVNDLRGKFIKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKK 187
                L+         K+ K E+    ++ +  +     +L   +  + T    E+E+K
Sbjct: 970  ARQKLQ-LEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEK 1026

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	203
1j1e_C	180	Troponin I, TNI; THIN filament, muscle regulation,	100.0
1ytz_I	182	Troponin I; muscle, THIN filament, actin binding,	100.0
1j1d_C	133	Troponin I, TNI; THIN filament, muscle regulation,	100.0
1ytz_T	107	Troponin T; muscle, THIN filament, actin binding,	99.98
1j1d_B	106	Troponin T, TNT; THIN filament, muscle regulation,	99.97
1a2x_B	47	Troponin I; muscle contraction regulation, complex	99.12
3bas_A	89	Myosin heavy chain, striated muscle/general contro	86.37

>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2

Probab=100.00  E-value=1.7e-65  Score=428.47  Aligned_cols=162  Identities=29%  Similarity=0.462  Sum_probs=108.4

Q ss_pred             hcCCCCChHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcH
Q psy4486          34 AKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDL  113 (203)
Q Consensus        34 akk~kms~~RK~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDl  113 (203)
                      .++|||||+|+++|++|||++|+++|++|+++++++|++||+|||||| ||||||+++|+++|++||++|++||+|+|||
T Consensus         6 ~kk~~mt~~Rk~~Lk~lll~kA~e~L~~E~e~k~eEKkkiLaER~kPL-nid~Lse~~L~e~ckELh~~I~~LEeEKYDl   84 (180)
T 1j1e_C            6 KKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRAQPL-ELAGLGFAELQDLARQLHARVDKVDEERYDI   84 (180)
T ss_dssp             CCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            368999999999999999999999999999999999999999999888 9999999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhhcCCCCcchhhhhcch-HHHHH-H-hhhhhccchhhhccccccchhhhhHHhhhccccc
Q psy4486         114 EIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYE-NKFAK-L-QKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPEW  190 (203)
Q Consensus       114 E~Kv~kq~~EI~eL~~kV~DLrGKfkkP~LkkV~~sa-~~~~~-l-~k~~~~~d~RanLK~VkKe~~~~~e~~~~~~~dW  190 (203)
                      +++|.+|+|||++|+++||||+|+|++|+|||||||| +|+.+ | ++|+++||||||||||+|++.   ++++++||||
T Consensus        85 E~kvkkqdyEI~dL~~rV~DLrGKFkKP~LkkV~~s~d~m~~allg~k~~~~~d~RanLK~Vkke~~---e~~~~~~~dW  161 (180)
T 1j1e_C           85 EAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISADAMMQALLGARAKESLDLRAHLKQVKKEDT---EKENREVGDW  161 (180)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC----------CCCCHHHHHHHHHSCC--------------------------------
T ss_pred             HHHHHhcchhHHHHHHHHHHHHhcccccchhhhcccHHHHHHHHHHhhHhhhhhHHHhccccccccc---cccccccchH
Confidence            9999999999999999999999999999999999999 45554 4 378999999999999999874   3455689999


Q ss_pred             ccccCCccc
Q psy4486         191 TKVGGDKGK  199 (203)
Q Consensus       191 rkn~e~k~~  199 (203)
                      |+||+++.+
T Consensus       162 rkn~e~~~g  170 (180)
T 1j1e_C          162 RKNIDALSG  170 (180)
T ss_dssp             ---------
T ss_pred             HHHHHHhcC
Confidence            999999865

>1ytz_I Troponin I; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.2 PDB: 2w49_2 2w4u_2 1yv0_I 1vdi_A 1vdj_A

Probab=100.00  E-value=4.8e-64  Score=420.21  Aligned_cols=160  Identities=26%  Similarity=0.430  Sum_probs=130.6

Q ss_pred             cCCCCChHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcHH
Q psy4486          35 KKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLE  114 (203)
Q Consensus        35 kk~kms~~RK~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDlE  114 (203)
                      ++++|||+|+++|++|||++|+++|++|+++++++|++||+|||||| |||| |+++|+++|++||+||++||+++|||+
T Consensus         5 ~k~kmt~~Rk~~Lk~lll~kA~e~L~~E~e~k~eeKkkiLaER~kPL-nid~-se~~L~e~ckELh~~I~~LEeEKYDlE   82 (182)
T 1ytz_I            5 KKRRAATARRQHLKSAMLQLAVTEIEKEAAAKEVEKQNYLAEHSPPL-SLPG-SMQELQELSKKLHAKIDSVDEERYDTE   82 (182)
T ss_dssp             STHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-CCCC-SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            56789999999999999999999999999999999999999999888 9999 999999999999999999999999999


Q ss_pred             HHHhhhhhHHHHHHHHHHHhhcCCCCcchhhhhcch-HHHHHH-h-hhhhccchhhhccccccchhhhhHHhhh--cccc
Q psy4486         115 IIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYE-NKFAKL-Q-KKAAEFNFRNQLKVVKKKEFTLEEEEKE--KKPE  189 (203)
Q Consensus       115 ~Kv~kq~~EI~eL~~kV~DLrGKfkkP~LkkV~~sa-~~~~~l-~-k~~~~~d~RanLK~VkKe~~~~~e~~~~--~~~d  189 (203)
                      ++|.+++|||++|+++||||+|+|++|+|++||||| +|+.+| + +|+++||||||||||+|+++   +++++  +|||
T Consensus        83 ~kvkkq~yEI~dL~~rVnDLrGKfkKP~LkkV~~sad~m~kallg~k~k~~~d~RanLK~Vkke~~---e~~~~~~~~~d  159 (182)
T 1ytz_I           83 VKLQKTNKELEDLSQKLFDLRGKFKRPPLRRVRMSADAMLRALLGSKHKVNMDLRANLKQVKKEDT---EKEKDLRDVGD  159 (182)
T ss_dssp             HHHHHHHHHHHHHTTTTGGGTCSCSSCSSCCCCCCHHHHHHHHHTTCCCCCCSSCCCCCCC-------------------
T ss_pred             HHHHhhhHHHHHHHHHHHHHHhhhcccchhhccccHhHHHHHHhCCCchhhhhHHHhccccccchh---hhhhhhccccc
Confidence            999999999999999999999999999999999999 566664 3 78999999999999999874   33445  8999


Q ss_pred             cccccCCccc
Q psy4486         190 WTKVGGDKGK  199 (203)
Q Consensus       190 Wrkn~e~k~~  199 (203)
                      ||+||+++.+
T Consensus       160 Wrkn~e~~~g  169 (182)
T 1ytz_I          160 WRKNIEEKSG  169 (182)
T ss_dssp             ----------
T ss_pred             HHHHHHhhcC
Confidence            9999999865

>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2

Probab=100.00  E-value=4e-50  Score=322.27  Aligned_cols=122  Identities=30%  Similarity=0.480  Sum_probs=108.7

Q ss_pred             hcCCCCChHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcH
Q psy4486          34 AKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDL  113 (203)
Q Consensus        34 akk~kms~~RK~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDl  113 (203)
                      +++|||||+|+++|++|||++|+++|++|+++++++|++||+|||||| ||||||+++|+++|++||+||++||+|||||
T Consensus         6 ~~k~~mt~~Rk~~Lk~lll~kA~e~l~kE~e~k~eeKkkiLaER~~pL-~id~ls~~~L~e~~keLh~~I~~LEeEKYDl   84 (133)
T 1j1d_C            6 KKKSKISASRKLQLKTLLLQIAKQELEREAEERRGEKGRALSTRAQPL-ELAGLGFAELQDLARQLHARVDKVDEERYDI   84 (133)
T ss_dssp             CSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            368999999999999999999999999999999999999999999888 9999999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHHHHHHHHhhcCCCCcchhhhhcch-HHHHHH
Q psy4486         114 EIIFRVKEAEITELNAQVNDLRGKFIKPTLKKVSKYE-NKFAKL  156 (203)
Q Consensus       114 E~Kv~kq~~EI~eL~~kV~DLrGKfkkP~LkkV~~sa-~~~~~l  156 (203)
                      +++|++|+|||++|+++||||+|||+||+|||||||| +|+.+|
T Consensus        85 E~kvkkq~yEI~dL~~rV~Dl~gKfkKP~LkkVr~sad~ml~al  128 (133)
T 1j1d_C           85 EAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISADAMMQAL  128 (133)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC--------CCCCCCHHHHHHHH
T ss_pred             HHHHHHcchHHHHHHHHHHHHHcccCCCccCccccCHHHHHHHH
Confidence            9999999999999999999999999999999999999 444444

>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1

Probab=99.98  E-value=1.3e-32  Score=213.62  Aligned_cols=93  Identities=23%  Similarity=0.355  Sum_probs=81.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcHHHHHhhhhhHHHHH
Q psy4486          48 RLLLRKKAAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEITEL  127 (203)
Q Consensus        48 ksllL~kA~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDlE~Kv~kq~~EI~eL  127 (203)
                      ++.||+++....+ ..++.+++|++||+|||||| ||||||+++|+++|++||++|++||+||||||++|.+++|||++|
T Consensus         5 ~g~~~~k~e~~~~-k~q~e~EeKkkiLaER~~pL-~id~l~~~~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL   82 (107)
T 1ytz_T            5 YSSYLAKADQKRG-KKQTARETKKKVLAERRKPL-NIDHLNEDKLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTL   82 (107)
T ss_dssp             CTTHHHHHHHHHH-HHHHHHHHHHHHHHHTCCCC-CCSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHhccc-HHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHH
Confidence            4566788766664 46777789999999999888 999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCcch
Q psy4486         128 NAQVNDLRGKFIKPTL  143 (203)
Q Consensus       128 ~~kV~DLrGKfkkP~L  143 (203)
                      +++|+|| |||++|+.
T Consensus        83 ~~rV~dl-gKfkKp~~   97 (107)
T 1ytz_T           83 RNRIDQA-QKHSKKAG   97 (107)
T ss_dssp             HHHHHHT-CCCC----
T ss_pred             HHHHHHh-cCccCCCC
Confidence            9999999 99999986

>1j1d_B Troponin T, TNT; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.1 PDB: 1j1e_B

Probab=99.97  E-value=2e-32  Score=212.32  Aligned_cols=93  Identities=23%  Similarity=0.357  Sum_probs=67.9

Q ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHhHHhhhhcCCCCCCCCCCHHHHHHHHHHHHHHHHhhhhhhhcHHHHHhhhhhHH
Q psy4486          48 RLLLRKK---AAEELKKEQERKAAERRRVIEQRCGTHKDWTNADEATVNKILKELWDRAFKLESEKYDLEIIFRVKEAEI  124 (203)
Q Consensus        48 ksllL~k---A~~~L~kEk~~k~eeKkk~LaER~~Pl~~idgLs~~~Lqe~ckELh~~I~~lEeErYDlE~Kv~kq~~EI  124 (203)
                      ++.||++   +.... ...++.+++|++||+|||||| ||||||+++|+++|++||++|++||+|+||||++|.+++|||
T Consensus         2 ~~g~l~~~~~~e~~~-~k~q~ereeKkkiLaER~kpL-~id~l~~~~L~e~~keLh~~I~~LEeEKYDlE~kv~kq~yEI   79 (106)
T 1j1d_B            2 FGGYIQKQAQTERKS-GKRQTEREKKKKILAERRKVL-AIDHLNEDQLREKAKELWQTIYNLEAEKFDLQEKFKQQKYEI   79 (106)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhHHHhcc-cHHHHHHHHHHHHHHHhCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhHHH
Confidence            4566777   33333 245556699999999999888 999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcCCCCcch
Q psy4486         125 TELNAQVNDLRGKFIKPTL  143 (203)
Q Consensus       125 ~eL~~kV~DLrGKfkkP~L  143 (203)
                      ++|+++|+|| |||+||+=
T Consensus        80 ~eL~~rV~dl-gKf~Kp~~   97 (106)
T 1j1d_B           80 NVLRNRINDN-QKVSKTRG   97 (106)
T ss_dssp             HHHHHHHHTC---------
T ss_pred             HHHHHHHHHh-cCccCCCC
Confidence            9999999999 99999973

>1a2x_B Troponin I; muscle contraction regulation, complex (skeletal muscle/muscle protein); 2.30A {Oryctolagus cuniculus} SCOP: j.22.1.1

Probab=99.12  E-value=4.8e-12  Score=85.19  Aligned_cols=42  Identities=26%  Similarity=0.459  Sum_probs=26.5

Q ss_pred             CCCCChHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy4486          36 KGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRVIEQR   77 (203)
Q Consensus        36 k~kms~~RK~~LksllL~kA~~~L~kEk~~k~eeKkk~LaER   77 (203)
                      +++||++|+++|+|+||++|.++|++|..+++++|++||+||
T Consensus         6 k~kms~sRK~~LKslmL~~A~~~Le~E~~~k~~eK~~~L~Er   47 (47)
T 1a2x_B            6 RNRAITARRQHLKSVMLQIAATELEKEEGRREAEKQNYLAEH   47 (47)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTC--------------
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            456999999999999999999999999999999999999986

>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A

Probab=86.37  E-value=1.4  Score=32.16  Aligned_cols=53  Identities=15%  Similarity=0.012  Sum_probs=36.7

Q ss_pred             hcCCCCCCCCCCHHHH---HHHHHHHHHHHHhhhhhhhcHHHHHhhhhhHHHHHHHH
Q psy4486          77 RCGTHKDWTNADEATV---NKILKELWDRAFKLESEKYDLEIIFRVKEAEITELNAQ  130 (203)
Q Consensus        77 R~~Pl~~idgLs~~~L---qe~ckELh~~I~~lEeErYDlE~Kv~kq~~EI~eL~~k  130 (203)
                      +++||+++.. +..++   .+-+..|-..+...+..+.+|+.+......+.++|...
T Consensus         2 kVKPLL~~~~-~eeEm~~~eeel~~lke~l~k~e~~rkele~~~~~l~~ek~~L~~q   57 (89)
T 3bas_A            2 SHMPLLSIAR-QEEEMKEQLKQMDKMKEDLAKTERIKKELEEQNVTLLEQKNDLFGS   57 (89)
T ss_dssp             --------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccccch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5789966543 45554   45577778889999999999999999999999999888

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00