Psyllid ID: psy4624

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHEEEEcccccEEEEEcccccEEEEEEEEEcccEEEEEEEEEEccccEEEEEEEEcccccEEEccEEEEEEEcccccccEEEEEcccHHHHHHHHHccccccccEEcccccHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHcccccccccccccccccEEEEEEEEEEEEccccccEEEEEccccccEEEEEEEcccccEEEEEEEEcccccEEEEEEEEcccccccccccEEEEEEccccccEEEEEcccHHHHHHHHHHcccccHEHHHHHHcHHHHHHHcc
Coil and Loop (DISEMBL)
mgnklsacscaplmrkayryedspwqtskrrdgHLLRLWAEVFHVSasgagsvkwqqvsedLVPVNItciqdapncIFLITAYNSQvdkildvklvqpgtrigqasecfvywkdpntndtwglnftspidarQFRECCVSTITFYILFKFTRSLLRNKFL
Flexible Loop (DISEMBL)
mgnklsacscaPLMRKAyryedspwqtskRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL
Low Complexity Region (SEG)
MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL
Disordered region (IsUnstruct)
********SCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLL*****
Disordered Region (DISOPRED)
*********CAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVS**************LRNKFL
Disordered Region (DISEMBL)
MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL
Disordered Region (DISPRO)
*****SACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLR****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTITFYILFKFTRSLLRNKFL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
P91621	2072	Protein still life, isofo	no	N/A	0.906	0.069	0.851	2e-75

>sp|P91621|SIF1_DROME Protein still life, isoform SIF type 1 OS=Drosophila melanogaster GN=sif PE=2 SV=2

 Score =  281 bits (718), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148

Regulates synaptic differentiation through the organization of actin cytoskeleton possibly by activating Rho-like GTPases. Is likely a factor in the cascade of Rac1 or Cdc42 in the neurons.
Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
195126817	3153	GI12138 [Drosophila mojavensis] gi|19391	0.906	0.045	0.868	2e-75
189237416	2043	PREDICTED: similar to AGAP006590-PD [Tri	0.906	0.070	0.861	2e-75
158296113	2736	AGAP006590-PB [Anopheles gambiae str. PE	0.906	0.052	0.855	2e-75
270007035	838	hypothetical protein TcasGA2_TC013482 [T	0.906	0.173	0.861	3e-75
357613402	873	hypothetical protein KGM_16663 [Danaus p	0.912	0.167	0.842	3e-75
158296109	2038	AGAP006590-PD [Anopheles gambiae str. PE	0.906	0.071	0.855	7e-75
194750209	809	GF23987 [Drosophila ananassae] gi|190624	0.906	0.179	0.851	2e-74
194867134	802	GG15281 [Drosophila erecta] gi|190653794	0.906	0.180	0.851	2e-74
161081617	2657	still life, isoform F [Drosophila melano	0.906	0.054	0.851	5e-74
442630399	2734	still life, isoform J [Drosophila melano	0.906	0.053	0.851	5e-74

>gi|195126817|ref|XP_002007865.1| GI12138 [Drosophila mojavensis] gi|193919474|gb|EDW18341.1| GI12138 [Drosophila mojavensis]

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 132/152 (86%), Positives = 140/152 (92%), Gaps = 7/152 (4%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 59

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP TNDT
Sbjct: 60  DLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMTNDT 119

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 WGLNFTSPIDAKQFRECCSPS------FKFSR 145

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189237416|ref|XP_001815363.1| PREDICTED: similar to AGAP006590-PD [Tribolium castaneum]

 Score =  286 bits (732), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/152 (86%), Positives = 140/152 (92%), Gaps = 7/152 (4%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS CSCAPL+RKAYRYEDSPWQTS+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 56  MGNKLS-CSCAPLIRKAYRYEDSPWQTSRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 114

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P C+F ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP TNDT
Sbjct: 115 DLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMTNDT 174

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 175 WGLNFTSPIDAKQFRECCSPS------FKFSR 200

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158296113|ref|XP_316614.4| AGAP006590-PB [Anopheles gambiae str. PEST] gi|157016357|gb|EAA11675.5| AGAP006590-PB [Anopheles gambiae str. PEST]

 Score =  286 bits (731), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 130/152 (85%), Positives = 139/152 (91%), Gaps = 7/152 (4%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS CSCAPLMRKAYRYEDSPWQ S+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 55  MGNKLS-CSCAPLMRKAYRYEDSPWQASRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 113

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P C+F ITAYNSQVDKILDV+LVQPGTRIGQASECF+YWKDP TNDT
Sbjct: 114 DLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLVQPGTRIGQASECFIYWKDPMTNDT 173

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 174 WGLNFTSPIDAKQFRECCSPS------FKFSR 199

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270007035|gb|EFA03483.1| hypothetical protein TcasGA2_TC013482 [Tribolium castaneum]

 Score =  286 bits (731), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 131/152 (86%), Positives = 140/152 (92%), Gaps = 7/152 (4%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS CSCAPL+RKAYRYEDSPWQTS+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 1   MGNKLS-CSCAPLIRKAYRYEDSPWQTSRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 59

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P C+F ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP TNDT
Sbjct: 60  DLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMTNDT 119

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 WGLNFTSPIDAKQFRECCSPS------FKFSR 145

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357613402|gb|EHJ68488.1| hypothetical protein KGM_16663 [Danaus plexippus]

 Score =  285 bits (730), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 128/152 (84%), Positives = 140/152 (92%), Gaps = 6/152 (3%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS+CSCAP++RKAYRYEDSPWQ S+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 1   MGNKLSSCSCAPILRKAYRYEDSPWQNSRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 60

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P C+F ITAYNSQVDKILDV+L+QPGTRIGQASECFVYWKDP TNDT
Sbjct: 61  DLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLLQPGTRIGQASECFVYWKDPMTNDT 120

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 121 WGLNFTSPIDAKQFRECCSPS------FKFSR 146

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158296109|ref|XP_316615.4| AGAP006590-PD [Anopheles gambiae str. PEST] gi|157016355|gb|EAA44262.4| AGAP006590-PD [Anopheles gambiae str. PEST]

 Score =  284 bits (727), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 130/152 (85%), Positives = 139/152 (91%), Gaps = 7/152 (4%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSE 60
           MGNKLS CSCAPLMRKAYRYEDSPWQ S+RRDGHLLRLWAEVFHVSASGAG+VKWQQVSE
Sbjct: 55  MGNKLS-CSCAPLMRKAYRYEDSPWQASRRRDGHLLRLWAEVFHVSASGAGTVKWQQVSE 113

Query: 61  DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDT 120
           DLVPVNITCIQD+P C+F ITAYNSQVDKILDV+LVQPGTRIGQASECF+YWKDP TNDT
Sbjct: 114 DLVPVNITCIQDSPECVFHITAYNSQVDKILDVRLVQPGTRIGQASECFIYWKDPMTNDT 173

Query: 121 WGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           WGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 174 WGLNFTSPIDAKQFRECCSPS------FKFSR 199

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194750209|ref|XP_001957520.1| GF23987 [Drosophila ananassae] gi|190624802|gb|EDV40326.1| GF23987 [Drosophila ananassae]

 Score =  283 bits (723), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194867134|ref|XP_001972011.1| GG15281 [Drosophila erecta] gi|190653794|gb|EDV51037.1| GG15281 [Drosophila erecta]

 Score =  283 bits (723), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161081617|ref|NP_001097517.1| still life, isoform F [Drosophila melanogaster] gi|158028446|gb|AAN12103.2| still life, isoform F [Drosophila melanogaster]

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442630399|ref|NP_001261446.1| still life, isoform J [Drosophila melanogaster] gi|440215338|gb|AGB94141.1| still life, isoform J [Drosophila melanogaster]

 Score =  281 bits (720), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 140/155 (90%), Gaps = 10/155 (6%)

Query: 1   MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
           MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct: 1   MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query: 58  VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
           VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct: 60  VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query: 118 NDTWGLNFTSPIDARQFRECCVSTITFYILFKFTR 152
           NDTWGLNFTSPIDA+QFRECC  +      FKF+R
Sbjct: 120 NDTWGLNFTSPIDAKQFRECCSPS------FKFSR 148

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
FB|FBgn0085447	2072	sif "still life" [Drosophila m	0.893	0.069	0.877	9.2e-67

FB|FBgn0085447 sif "still life" [Drosophila melanogaster (taxid:7227)]

 Score = 693 (249.0 bits), Expect = 9.2e-67, P = 9.2e-67
 Identities = 129/147 (87%), Positives = 136/147 (92%)

Query:     1 MGNKLSACSCAPLMRKAYRYEDSPWQTSKRRDGHLL---RLWAEVFHVSASGAGSVKWQQ 57
             MGNKLS CSCAPLMRKAYRYEDSPWQ+S+RRDGHLL   RLWAEVFHVSASGAG+VKWQQ
Sbjct:     1 MGNKLS-CSCAPLMRKAYRYEDSPWQSSRRRDGHLLSSFRLWAEVFHVSASGAGTVKWQQ 59

Query:    58 VSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT 117
             VSEDLVPVNITCIQD+P CIF ITAYNSQVDKILDV+LVQPGTRIGQASECFVYWKDP T
Sbjct:    60 VSEDLVPVNITCIQDSPECIFHITAYNSQVDKILDVRLVQPGTRIGQASECFVYWKDPMT 119

Query:   118 NDTWGLNFTSPIDARQFRECCVSTITF 144
             NDTWGLNFTSPIDA+QFRECC  +  F
Sbjct:   120 NDTWGLNFTSPIDAKQFRECCSPSFKF 146


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.443    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      160       160   0.00097  106 3  11 22  0.45    31
                                                     30  0.43    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  178 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.24u 0.13s 15.37t   Elapsed:  00:00:01
  Total cpu time:  15.24u 0.13s 15.37t   Elapsed:  00:00:01
  Start:  Thu Aug 15 12:23:37 2013   End:  Thu Aug 15 12:23:38 2013

GO:0005089 "Rho guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=NAS

GO:0030036 "actin cytoskeleton organization" evidence=NAS

GO:0007268 "synaptic transmission" evidence=NAS

GO:0045202 "synapse" evidence=NAS

GO:0050803 "regulation of synapse structure and activity" evidence=TAS

GO:0005057 "receptor signaling protein activity" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0050770 "regulation of axonogenesis" evidence=IGI

GO:0030676 "Rac guanyl-nucleotide exchange factor activity" evidence=ISS

GO:0051491 "positive regulation of filopodium assembly" evidence=IMP

GO:0032314 "regulation of Rac GTPase activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	160
smart00461	106	smart00461, WH1, WASP homology region 1	9e-29
cd00837	102	cd00837, EVH1_family, EVH1 (Drosophila Enabled (En	4e-04

>gnl|CDD|214674 smart00461, WH1, WASP homology region 1

 Score =  101 bits (254), Expect = 9e-29
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 37  RLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLV 96
            +      V    A + KW    E     N+   ++  +  F I     Q DK++  + +
Sbjct: 5   CIILARAVVQLYDADTKKWVPTGEGG-AANLVIDKNQRSYFFRIVGIKGQ-DKVIWNQEL 62

Query: 97  QPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECC 138
               +  QA+  F  W D      +GLNF S  +A++FR+  
Sbjct: 63  YKNFKYNQATPTFHQWAD--DKCVYGLNFASEEEAKKFRKKV 102

Region of the Wiskott-Aldrich syndrome protein (WASp) that contains point mutations in the majority of patients with WAS. Unknown function. Ena-like WH1 domains bind polyproline-containing peptides, and that Homer contains a WH1 domain. Length = 106

>gnl|CDD|241234 cd00837, EVH1_family, EVH1 (Drosophila Enabled (Ena)/Vasodilator-stimulated phosphoprotein (VASP) homology 1) domain

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 4/93 (4%)

Query: 44  HVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIG 103
            V      S  W         V+   ++D     F I   + +  K++    ++      
Sbjct: 8   VVMTRDDSSKGWVPAGGGASRVSY--VKDTGRNSFRIHGEDIKDKKVVINCTIRKNLVYN 65

Query: 104 QASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
           +A++ F  W D  T   +GLNF S  DAR+F  
Sbjct: 66  KATQTFHQWADDRT--VFGLNFASEEDARKFAR 96

The EVH1 domains are part of the PH domain superfamily. EVH1 subfamilies include Enables/VASP, Homer/Vesl, WASP, and Spred. Ligands are known for three of the EVH1 subfamilies, all of which bind proline-rich sequences: the Enabled/VASP family binds to FPPPP peptides, the Homer/Vesl family binds PPxxF peptides, and the WASP family binds LPPPEP peptides. EVH1 has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains. Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PF00568	111	WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1	99.22
cd00837	104	EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homolog	98.86
smart00461	106	WH1 WASP homology region 1. Region of the Wiskott-	98.71
cd01207	111	Ena-Vasp Enabled-VASP-type homology (EVH1) domain.	97.97
cd01206	111	Homer Homer type EVH1 domain. Homer type EVH1 doma	97.8
KOG4590|consensus	409		88.16
cd00835	122	RanBD Ran-binding domain. Ran-binding domain; This	80.71

>PF00568 WH1: WH1 domain; InterPro: IPR000697 The EVH1 (WH1, RanBP1-WASP) domain is found in multi-domain proteins implicated in a diverse range of signalling, nuclear transport and cytoskeletal events

Probab=99.22  E-value=4.6e-11  Score=85.41  Aligned_cols=90  Identities=24%  Similarity=0.404  Sum_probs=79.1

Q ss_pred             hhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCC
Q psy4624          40 AEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTND  119 (160)
Q Consensus        40 AEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~d  119 (160)
                      |+||+...+.  ..+|..+   ..+..|..++|.+...++|..+..+..+++-.+-+.++-...+++.+|..|+++..  
T Consensus        16 A~v~~~~p~~--~~~W~~~---~~~g~v~~v~d~~~~~y~I~~~~~~~~~~v~e~~l~~~~~Y~~~~~~Fh~f~~~~~--   88 (111)
T PF00568_consen   16 AQVYQADPDT--KRQWSPV---KGTGVVCFVKDNSRRSYFIRLYDLQDGKVVWEQELYPGFVYTKARPFFHQFEDDDC--   88 (111)
T ss_dssp             EEEEEEETTT--SESEEES---SSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESTT-EEEEESSSEEEEEETTC--
T ss_pred             EEEEEEEcCC--CCcEeeC---CeEEEEEEEEECCCCEEEEEEEEccccEEEEEeEecCCCEEEeCCCcEEEEEeCCe--
Confidence            6788776544  2349987   67788899999999999999999889999999999999999999999999998864  


Q ss_pred             cceeeccChhchhHHhh
Q psy4624         120 TWGLNFTSPIDARQFRE  136 (160)
Q Consensus       120 TwGlNFtSp~Da~qFrE  136 (160)
                      .|||||.|.+||++|.+
T Consensus        89 ~~GLnF~se~eA~~F~~  105 (111)
T PF00568_consen   89 VYGLNFASEEEADQFYK  105 (111)
T ss_dssp             EEEEEESSHHHHHHHHH
T ss_pred             EEEEecCCHHHHHHHHH
Confidence            99999999999999986

This domain of around 115 amino acids is present in species ranging from yeast to mammals. Many EVH1-containing proteins associate with actin-based structures and play a role in cytoskeletal organisation. EVH1 domains recognise and bind the proline-rich motif FPPPP with low-affinity, further interactions then form between flanking residues [][]. WASP family proteins contain a EVH1 (WH1) in their N-terminals which bind proline-rich sequences in the WASP interacting protein. Proteins of the RanBP1 family contain a WH1 domain in their N-terminal region, which seems to bind a different sequence motif present in the C-terminal part of RanGTP protein [,]. Tertiary structure of the WH1 domain of the Mena protein revealed structure similarities with the pleckstrin homology (PH) domain. The overall fold consists of a compact parallel beta-sandwich, closed along one edge by a long alpha-helix. A highly conserved cluster of three surface-exposed aromatic side-chains forms the recognition site for the molecules target ligands. [].; GO: 0005515 protein binding; PDB: 1I2H_A 1DDV_A 1DDW_A 1EGX_A 3SYX_A 1TJ6_B 1XOD_B 1EVH_A 1I7A_B 2JP2_A ....

>cd00837 EVH1 EVH1 (Enabled, Vasp-Homology) or WASP Homology (WH1) domain

Probab=98.86  E-value=1.1e-08  Score=72.94  Aligned_cols=95  Identities=26%  Similarity=0.389  Sum_probs=77.1

Q ss_pred             hhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcc
Q psy4624          42 VFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTW  121 (160)
Q Consensus        42 vFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTw  121 (160)
                      +-+|-....++-+|...+  .....|..++|.+...|+|..+..+..+++=-+-+-+|-...+++..|--|++.  ...+
T Consensus         8 ~a~v~~~~~~~~~W~~~~--~~~g~v~~~~d~~~~~y~i~~~~~~~~~vv~~~~l~~~~~y~~~~~~Fh~w~~~--~~~~   83 (104)
T cd00837           8 VAQVYTADPSTGKWVPAS--GGTGAVSLVKDSTRNTYRIRGVDIQDQKVIWNQEIYKGLKYTQATPFFHQWEDD--NCVY   83 (104)
T ss_pred             EEEEEEECCCCCceEECC--CCeEEEEEEEECCCCEEEEEEEecCCCeEEEEEEecCCcEEeecCCeEEEEEcC--CcEE
Confidence            333333333468998866  455778889999999999999998877777666667799999999999999977  5589


Q ss_pred             eeeccChhchhHHhhhccc
Q psy4624         122 GLNFTSPIDARQFRECCVS  140 (160)
Q Consensus       122 GlNFtSp~Da~qFrEcc~~  140 (160)
                      ||||.|++||++|.+....
T Consensus        84 GL~F~se~eA~~F~~~v~~  102 (104)
T cd00837          84 GLNFASEEEAAQFRKKVLE  102 (104)
T ss_pred             EEeeCCHHHHHHHHHHHHh
Confidence            9999999999999876443

EVH1 (Enabled, Vasp-Homology) or WASP Homology (WH1) domain. The EVH1 domain binds to other proteins at proline rich sequences in either FPPPP or PPXXF motifs. It is found in the cytoskeletal reorganization proteins Enabled VASP, and WASP, and in the synaptic scaffolding protein Homer. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>smart00461 WH1 WASP homology region 1

Probab=98.71  E-value=1.1e-07  Score=68.46  Aligned_cols=83  Identities=25%  Similarity=0.414  Sum_probs=68.9

Q ss_pred             ccceeEeecC-ceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhc
Q psy4624          52 SVKWQQVSED-LVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPID  130 (160)
Q Consensus        52 ~vkWqqvsed-LvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~D  130 (160)
                      +-+|...... ++.|.+  ..+...+.|.|......+ ++|-.+-+.+|-...+++.+|-.|++  +...|||||.|++|
T Consensus        20 ~~~W~~~~~gg~~~~~~--~~~~~~~~~ri~~~~~~~-~vv~e~ely~~~~y~~~~~~Fh~f~~--~~~~~GLnF~se~E   94 (106)
T smart00461       20 TKKWVPTGEGGAANLVI--DKNQRSYFFRIVGIKGQD-KVIWNQELYKNFKYNQATPTFHQWAD--DKCVYGLNFASEEE   94 (106)
T ss_pred             CCCeEECCCCCEEEEEE--EecCCeEEEEEEEecCCC-eEEEEEeccCCCEEeecCCceEEEEe--CCeEEEeecCCHHH
Confidence            3469888777 555554  445567889999998665 89999999999999999999999996  67789999999999


Q ss_pred             hhHHhhhcc
Q psy4624         131 ARQFRECCV  139 (160)
Q Consensus       131 a~qFrEcc~  139 (160)
                      |++|.+...
T Consensus        95 A~~F~~~v~  103 (106)
T smart00461       95 AKKFRKKVL  103 (106)
T ss_pred             HHHHHHHHH
Confidence            999987654

Region of the Wiskott-Aldrich syndrome protein (WASp) that contains point mutations in the majority of patients with WAS. Unknown function. Ena-like WH1 domains bind polyproline-containing peptides, and that Homer contains a WH1 domain.

>cd01207 Ena-Vasp Enabled-VASP-type homology (EVH1) domain

Probab=97.97  E-value=2.3e-05  Score=59.04  Aligned_cols=96  Identities=25%  Similarity=0.370  Sum_probs=78.2

Q ss_pred             hhhhhhhhhhhccCCCCccceeEeec---CceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEE
Q psy4624          35 LLRLWAEVFHVSASGAGSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVY  111 (160)
Q Consensus        35 llRlwAEvFhvSa~~~g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~Y  111 (160)
                      +.+.-|-||..+.+.   -+|--.+.   .|.+|.|-.  +.....|-|-+...+..++|=-+-+-++-...+++.-|-=
T Consensus         4 i~~~rA~Vm~~d~~t---k~W~P~~~~~~~ls~V~~~~--~~~~~~yrIvg~~~~~~~~v~e~~l~~~l~y~k~~p~Fh~   78 (111)
T cd01207           4 ICQARASVMVYDDSN---KKWVPAGGGSQGFSRVQIYH--HPRNNTFRVVGRKLQDHQVVINCAIVKGLKYNQATPTFHQ   78 (111)
T ss_pred             eEEEEEEeeEEcCCC---CcEEcCCCCCCCcceEEEEE--cCCCCEEEEEEeecCCCcEEEEEEecCCceeeecCCccee
Confidence            445567777777666   46998887   788888854  4557778888887777788888888899999999999999


Q ss_pred             ecCCCCCCcceeeccChhchhHHhhh
Q psy4624         112 WKDPNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       112 Wkd~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      |+|..  .-|||||.|++||+.|.+-
T Consensus        79 w~~~~--~v~GLnF~Se~eA~~F~~~  102 (111)
T cd01207          79 WRDAR--QVYGLNFGSKEDATMFASA  102 (111)
T ss_pred             eecCC--eEEeeccCCHHHHHHHHHH
Confidence            99875  5899999999999999874

Enabled-VASP-type homology (EVH1) domain. The EVH1 domain binds to other proteins at proline rich sequences. It is found in proteins involved in cytoskeletal reorganization such as Enabled and VASP. Ena-VASP type EVH1 domains specifically recognize FPPPP motifs in the focal adhesion proteins zyxin and vinculin, and the ActA surface protein of Listeria monocytogenes. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>cd01206 Homer Homer type EVH1 domain

Probab=97.80  E-value=5.6e-05  Score=58.06  Aligned_cols=92  Identities=23%  Similarity=0.434  Sum_probs=71.6

Q ss_pred             hhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCC
Q psy4624          40 AEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTND  119 (160)
Q Consensus        40 AEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~d  119 (160)
                      |-||..+...  .-+|--.++.  +|+|.=.+|.-+..|-|-+..  ..++|--=-+-||---.++|.-|-=|+|+.+++
T Consensus        11 A~V~~yd~~t--Kk~WvPs~~~--~~~V~~y~~~~~ntfRIi~~~--~~~~iINc~i~~~~~y~kas~~FhQWrD~R~~t   84 (111)
T cd01206          11 AHVFQIDPKT--KKNWIPASKH--AVTVSYFYDSTRNVYRIISVG--GTKAIINSTITPNMTFTKTSQKFGQWADSRANT   84 (111)
T ss_pred             eEEEEECCCC--cceeEeCCCC--ceeEEEEecCCCcEEEEEEec--CcEEEEeccccCCcceeecccccccccccccce
Confidence            4566666532  2589888875  467777888888888887754  234444445568888999999999999999999


Q ss_pred             cceeeccChhchhHHhhh
Q psy4624         120 TWGLNFTSPIDARQFREC  137 (160)
Q Consensus       120 TwGlNFtSp~Da~qFrEc  137 (160)
                      -|||||.|.+|+.+|-|-
T Consensus        85 VyGLnF~Sk~ea~~F~~~  102 (111)
T cd01206          85 VYGLGFSSEQQLTKFAEK  102 (111)
T ss_pred             eeecccCCHHHHHHHHHH
Confidence            999999999999999763

Homer type EVH1 domain. Homer is a synaptic scaffolding protein, involved in neuronal signaling. It contains an EVH1 domain, which binds to both neurotransmitter receptors, such as the metabotropic glutamate receptor (mGluR) and to other scaffolding proteins via PPXXF motifs, in order to target them to the synaptic junction. It has a PH-like fold, despite having minimal sequence similarity to PH or PTB domains.

>KOG4590|consensus

Probab=88.16  E-value=0.41  Score=43.19  Aligned_cols=32  Identities=38%  Similarity=0.734  Sum_probs=26.2

Q ss_pred             ceeceeeEEEecCCCCCCcceeeccChhchhHHh
Q psy4624         102 IGQASECFVYWKDPNTNDTWGLNFTSPIDARQFR  135 (160)
Q Consensus       102 i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~qFr  135 (160)
                      ..+|--=|--|||-  .+-|||||-|++||..|-
T Consensus        59 YnkatptFHqWR~a--rqvyGLnFqs~~DA~~Fa   90 (409)
T KOG4590|consen   59 YNKATPTFHQWRDA--RQVYGLTFQSEQDARAFA   90 (409)
T ss_pred             eeecccchhhhhhh--hhhhcccccChhhhhhhh
Confidence            34555556679977  899999999999999995

>cd00835 RanBD Ran-binding domain

Probab=80.71  E-value=6.5  Score=28.35  Aligned_cols=81  Identities=16%  Similarity=0.258  Sum_probs=48.8

Q ss_pred             cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceece--eeEEEec--CC----CCCCcceee
Q psy4624          53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQAS--ECFVYWK--DP----NTNDTWGLN  124 (160)
Q Consensus        53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S--~cF~YWk--d~----~t~dTwGlN  124 (160)
                      -.|+.-.---+=++...-....+.|+    .+.++-||+=--.+.|+-.+..++  +-++-|-  |.    ..-.+|.+.
T Consensus        28 ~~WkerG~G~lki~~~k~~~~~Rivm----R~d~~~kv~lN~~i~~~~~~~~~~~~~k~~~~~~~d~~~~~~~~~~~~lr  103 (122)
T cd00835          28 KEWKERGVGELKILKHKDTGKYRLLM----RRDQVLKLCLNHKLVPGMKLQPMGNSDKSIVWAAMDFSDDEPKPETFAIR  103 (122)
T ss_pred             CCCeeceEEEEEEEEcCCCCcEEEEE----EeCCccEEEEeeEecCCcEEeecCCCCcEEEEEeeecCCCCCcEEEEEEE
Confidence            34554433333344332223334333    333566777666777888777776  5566563  22    345689999


Q ss_pred             ccChhchhHHhhh
Q psy4624         125 FTSPIDARQFREC  137 (160)
Q Consensus       125 FtSp~Da~qFrEc  137 (160)
                      |.++++|++|.+-
T Consensus       104 fk~~~~a~~f~~~  116 (122)
T cd00835         104 FKTEEIADEFKEA  116 (122)
T ss_pred             ECCHHHHHHHHHH
Confidence            9999999999863

Ran-binding domain; This domain of approximately 150 residues shares structural similarity to the PH domain, but lacks detectable sequence similarity. Ran is a Ras-like nuclear small GTPase, which regulates receptor-mediated transport between the nucleus and the cytoplasm. RanGTP hydrolysis is stimulated by RanGAP together with the Ran-binding domain containing acessory proteins RanBP1 and RanBP2. These accessory proteins stabilize the active GTP-bound form of Ran . The Ran-binding domain is found in multiple copies in Nuclear pore complex proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
1i2h_A	168	PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology	2e-22
1ddw_A	120	GLGF-domain protein homer; pleckstrin homology dom	7e-20
1evh_A	112	WH1 domain, protein (MENA EVH1 domain); molecular	3e-18
1qc6_A	130	EVH1 domain from ENA/VAsp-like protein; AN incompl	4e-18
1egx_A	115	VAsp, vasodilator-stimulated phosphoprotein; EVH1,	3e-14
3syx_A	130	Sprouty-related, EVH1 domain-containing protein 1;	2e-10
1xod_A	118	Spred1; sprouty, EVH1, peptide-binding, signaling	1e-06
2jp2_A	126	Spred-2, sprouty-related, EVH1 domain-containing p	1e-05

>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4 Length = 168

 Score = 86.9 bits (214), Expect = 2e-22
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 6/116 (5%)

Query: 27  TSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQ 86
                +  +    A VF +  +      W   S+  V V+     D+   ++ I + +  
Sbjct: 3   PEFMGEQPIFSTRAHVFQIDPNTKK--NWVPTSKHAVTVSY--FYDSTRNVYRIISLDGS 58

Query: 87  VDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECCVSTI 142
             K +    + P     + S+ F  W D   N  +GL F+S     +F E      
Sbjct: 59  --KAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFK 112

>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A* Length = 120

 Score = 79.0 bits (194), Expect = 7e-20
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 6/100 (6%)

Query: 39  WAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQP 98
            A VF +  +   +  W   S+  V V+     D+   ++ I + +    K +    + P
Sbjct: 10  RAHVFQIDPNTKKN--WVPTSKHAVTVSY--FYDSTRNVYRIISLDGS--KAIINSTITP 63

Query: 99  GTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECC 138
                + S+ F  W D   N  +GL F+S     +F E  
Sbjct: 64  NMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKF 103

>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A Length = 112

 Score = 74.6 bits (183), Expect = 3e-18
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 32  DGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKIL 91
           +  + +  A V     +   + KW           +       N  F +     Q  +++
Sbjct: 3   EQSICQARAAVMVYDDA---NKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVV 59

Query: 92  DVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFREC 137
               +  G +  QA++ F  W+D      +GLNF S  DA  F   
Sbjct: 60  INCAIPKGLKYNQATQTFHQWRDARQ--VYGLNFGSKEDANVFASA 103

>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4 Length = 130

 Score = 74.8 bits (183), Expect = 4e-18
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 32  DGHLLRLWAEVFHVSASGAGSVKWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQVDKI 90
           +  + +  A V     +   S KW  +         I    +  +  F +     Q  ++
Sbjct: 3   EQSICQARASVMVYDDT---SKKWVPIKPGQQGFSRINIYHNTASSTFRVVGVKLQDQQV 59

Query: 91  LDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
           +    +  G +  QA+  F  W+D      +GLNF S  +A  F  
Sbjct: 60  VINYSIVKGLKYNQATPTFHQWRDARQ--VYGLNFASKEEATTFSN 103

>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4 Length = 115

 Score = 64.3 bits (156), Expect = 3e-14
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 32  DGHLLRLWAEVFHVSASGAGSVKWQQVSE-DLVPVNITCIQDAPNCIFLITAYNSQVDKI 90
           +  +    A V         + +W            +    +     F +     Q D+ 
Sbjct: 3   ETVICSSRATVMLYDDG---NKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQ 59

Query: 91  LDVK-LVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
           + +   +  G +  QA+  F  W+D      WGLNF S  DA QF  
Sbjct: 60  VVINCAIVRGVKYNQATPNFHQWRDARQ--VWGLNFGSKEDAAQFAA 104

>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens} Length = 130

 Score = 54.3 bits (130), Expect = 2e-10
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 11/116 (9%)

Query: 26  QTSKRRDGHLLRLWAEVFHVSASG-----AGSVKWQQVSEDLVPVNITCIQDAPNCIFLI 80
                      R+ A V     S       G      V+       +   ++     F I
Sbjct: 4   HHHHHSHMSYARVRAVVMTRDDSSGGWLPLGGSGLSSVTV----FKVPHQEENGCADFFI 59

Query: 81  TAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
                +   ++   +++      + +  F +WK  +    +GL F SP DAR F  
Sbjct: 60  RGERLRDKMVVLECMLKKDLIYNKVTPTFHHWKIDDK--KFGLTFQSPADARAFDR 113

>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A Length = 118

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 32  DGHLLRLWAEVFHVSASGAGSVKWQQVS-EDLVPVNITCIQ---DAPNCIFLITAYNSQV 87
           D    R+ A V     S   S  W Q+    L  V ++      D+    FL+     + 
Sbjct: 3   DDSYARVRAVVMTRDDS---SGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRD 59

Query: 88  DKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
             ++   +++      + +  F +W+  +    +GL F SP DAR F  
Sbjct: 60  KTVVLECVLRRDLVYNKVTPTFHHWRIGDK--KFGLTFQSPADARAFDR 106

>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} Length = 126

 Score = 41.5 bits (97), Expect = 1e-05
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 26  QTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPV-NITCIQDAPNCIFLITAYN 84
           +T    D +++R+ A V     S  G    +      V V  +   +      FLI    
Sbjct: 6   ETHPDDDSYIVRVKAVVMTRDDSSGGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGER 65

Query: 85  SQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
            +   ++    V+      +A+  F +WK  N    +GL F SP DAR F  
Sbjct: 66  QKDKLVVLECYVRKDLVYTKANPTFHHWKVDNR--KFGLTFQSPADARAFDR 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
2jp2_A	126	Spred-2, sprouty-related, EVH1 domain-containing p	98.22
3syx_A	130	Sprouty-related, EVH1 domain-containing protein 1;	98.21
1ddw_A	120	GLGF-domain protein homer; pleckstrin homology dom	98.16
1xod_A	118	Spred1; sprouty, EVH1, peptide-binding, signaling	98.12
1evh_A	112	WH1 domain, protein (MENA EVH1 domain); molecular	97.88
1i2h_A	168	PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology	97.85
1egx_A	115	VAsp, vasodilator-stimulated phosphoprotein; EVH1,	97.84
1qc6_A	130	EVH1 domain from ENA/VAsp-like protein; AN incompl	97.72
1mke_A	152	WIP - N-WAsp, fusion protein consisting of wiskott	89.68
2crf_A	150	RAN binding protein 3; RAN_BP1 domain, ranbp3, str	88.86
2ifs_A	169	N-WAsp, wiskott-aldrich syndrome protien ineractin	88.68
3n7c_A	130	ABR034WP; nuclear pore complex, NUP2, RAN-binding	85.51

>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}

Probab=98.22  E-value=3.1e-06  Score=62.78  Aligned_cols=101  Identities=25%  Similarity=0.329  Sum_probs=84.8

Q ss_pred             CcchhhhhhhhhhhccCCCCccceeEeecC-ceeeeeeeee---cCCCeEEEEEeeecccceEEEEEeecCCCcceecee
Q psy4624          32 DGHLLRLWAEVFHVSASGAGSVKWQQVSED-LVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASE  107 (160)
Q Consensus        32 dghllRlwAEvFhvSa~~~g~vkWqqvsed-LvpVnItcIq---d~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~  107 (160)
                      +-.+.+.=|.||....+.   -+|...... |-+|+|.-++   |.++..|.|-.+.-++.+++--+-+-++-...+++.
T Consensus        12 ~~~i~~~~A~Vm~~D~~~---~~W~p~~~g~ls~v~v~~~~~~~d~~~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~~~p   88 (126)
T 2jp2_A           12 DSYIVRVKAVVMTRDDSS---GGWFPQEGGGISRVGVCKVMHPEGNGRSGFLIHGERQKDKLVVLECYVRKDLVYTKANP   88 (126)
T ss_dssp             CSEEEEEEEEEEEECTTS---SSSEECSCCSCEEEEEECCBCTTCSSCBCEEEEEEESSSSCEEEEEEESSCCCEEEEET
T ss_pred             cceEEEEEEEEeeEcCCC---CCEeeCCCCCcccEEEEEecCCCCCCCCEEEEEEEEcCCCeEEEEEEEeCCceEEecCC
Confidence            445667778888886322   489988864 4469999888   999999999999988889998899999999999999


Q ss_pred             eEEEecCCCCCCcceeeccChhchhHHhhh
Q psy4624         108 CFVYWKDPNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       108 cF~YWkd~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      -|-=|+|..  .-|||||.|++||++|.+-
T Consensus        89 ~FH~w~~~~--~~~GLnF~se~eA~~F~~~  116 (126)
T 2jp2_A           89 TFHHWKVDN--RKFGLTFQSPADARAFDRG  116 (126)
T ss_dssp             TEEEEECSS--SEEEEEESSHHHHHHHHHH
T ss_pred             cceEEEcCC--EEEEEecCCHHHHHHHHHH
Confidence            999999885  4499999999999999763

>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}

Probab=98.21  E-value=4.3e-06  Score=63.54  Aligned_cols=97  Identities=22%  Similarity=0.329  Sum_probs=79.4

Q ss_pred             hhhhhhhhhhccCCCCccceeEee-cCceeeeeeeeecCC---CeEEEEEeeecccceEEEEEeecCCCcceeceeeEEE
Q psy4624          36 LRLWAEVFHVSASGAGSVKWQQVS-EDLVPVNITCIQDAP---NCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVY  111 (160)
Q Consensus        36 lRlwAEvFhvSa~~~g~vkWqqvs-edLvpVnItcIqd~p---~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~Y  111 (160)
                      .|..|-||....+.   -+|--++ ..|-+|+|--+++.+   +..|-|-...-++.+++--=-+.+|-...+++.-|==
T Consensus        14 ~~~rA~Vm~~Dd~t---k~WlP~gg~glS~v~iy~~~~~~~~~~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkatp~FHq   90 (130)
T 3syx_A           14 ARVRAVVMTRDDSS---GGWLPLGGSGLSSVTVFKVPHQEENGCADFFIRGERLRDKMVVLECMLKKDLIYNKVTPTFHH   90 (130)
T ss_dssp             EEEEEEEEEECSSS---SCEEESSSSCCEEEEEEEEESSSTTSSEEEEEEEEETTTCCEEEEEECCTTCEEEEEETTEEE
T ss_pred             eEEEEEeeeEcCCC---CceEeCCCCCCceEEEEeccCCCCCCCcEEEEEEEecCCCeEEEeeeecCCceEEeccccccc
Confidence            47778888887766   4699886 457788887777653   4789998887677777666778899999999999999


Q ss_pred             ecCCCCCCcceeeccChhchhHHhhh
Q psy4624         112 WKDPNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       112 Wkd~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      |+|+.  +-|||||.|++||++|-|-
T Consensus        91 Wrd~~--~~yGL~F~S~~dA~~F~~~  114 (130)
T 3syx_A           91 WKIDD--KKFGLTFQSPADARAFDRG  114 (130)
T ss_dssp             EEETT--EEEEEEESSHHHHHHHHHH
T ss_pred             ccccC--eEeecccCCHHHHHHHHHH
Confidence            99976  6699999999999999763

>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*

Probab=98.16  E-value=7.2e-06  Score=60.24  Aligned_cols=95  Identities=22%  Similarity=0.418  Sum_probs=76.1

Q ss_pred             hhhhhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCC
Q psy4624          37 RLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPN  116 (160)
Q Consensus        37 RlwAEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~  116 (160)
                      +.=|.||....+.  .-+|.-.+...  ++|+=+.|.+...|-|-.-.  +.+++--..+-|+-...+++.-|-=|+|..
T Consensus         8 ~~rA~V~~~D~~t--k~~W~p~g~~~--~~V~~~~d~~~~~yRIv~~~--~~~vv~n~~i~~~l~y~~a~p~FhqW~d~~   81 (120)
T 1ddw_A            8 STRAHVFQIDPNT--KKNWVPTSKHA--VTVSYFYDSTRNVYRIISLD--GSKAIINSTITPNMTFTKTSQKFGQWADSR   81 (120)
T ss_dssp             EEEEEEEEECTTT--SCSEEESCSSC--EEEEEEEETTTTEEEEEEEE--TTEEEEEEECCTTCCCEECSSSEEEEEETT
T ss_pred             EEEEEEEEEcCCC--CCceEeCCCCc--eEEEEEEcCCCCEEEEEEcc--CCEEEEeCEecCCcEEeeCCccccEEEcCC
Confidence            3446666664332  24898877665  56667889988888887744  678888888899999999999999999999


Q ss_pred             CCCcceeeccChhchhHHhhh
Q psy4624         117 TNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       117 t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      .+.-|||||.|++||++|.+-
T Consensus        82 ~~~~~GLnF~s~~eA~~F~~~  102 (120)
T 1ddw_A           82 ANTVYGLGFSSEHHLSKFAEK  102 (120)
T ss_dssp             TTEEEEEECSSHHHHHHHHHH
T ss_pred             CcEEEEeccCCHHHHHHHHHH
Confidence            999999999999999999753

>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A

Probab=98.12  E-value=3.1e-06  Score=61.77  Aligned_cols=100  Identities=24%  Similarity=0.372  Sum_probs=76.3

Q ss_pred             CcchhhhhhhhhhhccCCCCccceeEeecC-ceeeeeeeee---cCCCeEEEEEeeecccceEEEEEeecCCCcceecee
Q psy4624          32 DGHLLRLWAEVFHVSASGAGSVKWQQVSED-LVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASE  107 (160)
Q Consensus        32 dghllRlwAEvFhvSa~~~g~vkWqqvsed-LvpVnItcIq---d~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~  107 (160)
                      +-.+.+.=|.||....+   +-+|.-.... |-+|+|.-++   |.+...|.|-...-+..+++--.-+-++-...+++.
T Consensus         3 ~~~i~~~~A~V~~~d~~---~~~W~p~~~g~ls~v~i~~~~~~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p   79 (118)
T 1xod_A            3 DDSYARVRAVVMTRDDS---SGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKVTP   79 (118)
T ss_dssp             --CCEEEEEEEEEECSS---SSCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEEET
T ss_pred             CccEEEEEEEEeeEcCC---CCCEeeCCCCCcccEEEEEecCcCCCCCCEEEEEEEECCCCeEEEEEEEeCCcEEEecCC
Confidence            34456667888888632   2489988754 4579999888   888999999999877888888888889999999999


Q ss_pred             eEEEecCCCCCCcceeeccChhchhHHhh
Q psy4624         108 CFVYWKDPNTNDTWGLNFTSPIDARQFRE  136 (160)
Q Consensus       108 cF~YWkd~~t~dTwGlNFtSp~Da~qFrE  136 (160)
                      -|-=|+|.  ..-|||||.|++||++|-+
T Consensus        80 ~Fh~w~~~--~~~~GL~F~se~eA~~F~~  106 (118)
T 1xod_A           80 TFHHWRIG--DKKFGLTFQSPADARAFDR  106 (118)
T ss_dssp             TEEEEEET--TEEEEEEESSHHHHHHHHH
T ss_pred             cceEEEeC--CEEEEEecCCHHHHHHHHH
Confidence            99999987  5569999999999999975

>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A

Probab=97.88  E-value=5.2e-05  Score=54.61  Aligned_cols=94  Identities=24%  Similarity=0.396  Sum_probs=75.1

Q ss_pred             hhhhhhhhhccCCCCccceeEeec--CceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecC
Q psy4624          37 RLWAEVFHVSASGAGSVKWQQVSE--DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKD  114 (160)
Q Consensus        37 RlwAEvFhvSa~~~g~vkWqqvse--dLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd  114 (160)
                      +.=|.||....+.   -+|.-...  .+.+|.+  ..|.+...|-|-.+.-+..+++--+=+-++-...+++.-|-=|+|
T Consensus         8 ~~~A~V~~~d~~~---~~W~p~~~~~g~s~V~~--~~d~~~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~~p~Fh~w~~   82 (112)
T 1evh_A            8 QARAAVMVYDDAN---KKWVPAGGSTGFSRVHI--YHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRD   82 (112)
T ss_dssp             EEEEEEEEEETTT---TEEEEGGGCCSCEEEEE--EEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCCSSSEEEEEC
T ss_pred             EEEEEEEEEcCCC---CceEECCCCCCceEEEE--EEECCCCEEEEEEEECCCCcEEEeeEecCCceEEecCccceeEec
Confidence            3446677765544   38988773  3555544  778889999999998777788877888899999999999999998


Q ss_pred             CCCCCcceeeccChhchhHHhhh
Q psy4624         115 PNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       115 ~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      ..  .-|||||.|++||++|.+-
T Consensus        83 ~~--~~~GLnF~se~eA~~F~~~  103 (112)
T 1evh_A           83 AR--QVYGLNFGSKEDANVFASA  103 (112)
T ss_dssp             SS--CEEEEEESSHHHHHHHHHH
T ss_pred             CC--EEEEEecCCHHHHHHHHHH
Confidence            85  6999999999999999763

>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4

Probab=97.85  E-value=4.4e-05  Score=59.75  Aligned_cols=99  Identities=22%  Similarity=0.407  Sum_probs=79.2

Q ss_pred             cchhhhhhhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEe
Q psy4624          33 GHLLRLWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYW  112 (160)
Q Consensus        33 ghllRlwAEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YW  112 (160)
                      -.|.+.=|.||....+.  .-+|.-.+...+.|.|  +.|.++..|-|-.-.  +.+++--..+-++-...+++.-|-=|
T Consensus         9 ~~I~s~rA~Vm~~D~~t--k~~WvP~g~~~~~V~i--~~d~~rnsyRIvg~~--d~kvvinc~I~~~l~Y~kasp~FHqW   82 (168)
T 1i2h_A            9 QPIFSTRAHVFQIDPNT--KKNWVPTSKHAVTVSY--FYDSTRNVYRIISLD--GSKAIINSTITPNMTFTKTSQKFGQW   82 (168)
T ss_dssp             CCSEEEEEEEEEECTTS--SCCSEESCSSCEEEEE--EEETTTTEEEEEEEE--TTEEEEEEECCTTCCEEEEETTEEEE
T ss_pred             eeEEEEEEEEEEECCCC--CCceeecCCCCeEEEE--EEcCCCCEEEEEEcc--CCEEEEecEecCCcEEeeCCccccee
Confidence            34566668888875432  2479887777665544  588888888887744  66888888889999999999999999


Q ss_pred             cCCCCCCcceeeccChhchhHHhhh
Q psy4624         113 KDPNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       113 kd~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      +|...+.-|||||.|++||++|.+-
T Consensus        83 ~d~~~~~v~GLnF~Se~eA~~F~~~  107 (168)
T 1i2h_A           83 ADSRANTVYGLGFSSEHHLSKFAEK  107 (168)
T ss_dssp             EETTTTEEEEEEESSHHHHHHHHHH
T ss_pred             ecCCCcEEEEeccCCHHHHHHHHHH
Confidence            9999889999999999999999764

>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4

Probab=97.84  E-value=4.2e-05  Score=55.43  Aligned_cols=92  Identities=23%  Similarity=0.401  Sum_probs=72.9

Q ss_pred             hhhhhhhccCCCCccceeEeec---CceeeeeeeeecCCCeEEEEEeeecc-cceEEEEEeecCCCcceeceeeEEEecC
Q psy4624          39 WAEVFHVSASGAGSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQ-VDKILDVKLVQPGTRIGQASECFVYWKD  114 (160)
Q Consensus        39 wAEvFhvSa~~~g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsq-vdkILdvqL~qp~t~i~~~S~cF~YWkd  114 (160)
                      =|.||....+.   -+|.-...   .+-  +|.=+.|.+...|.|-.+.-+ ..+++--+-+-++-...+++.-|-=|+|
T Consensus        10 ~A~V~~~d~~~---~~W~p~~~g~~gvs--~V~~~~d~~~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~~~~p~FH~w~~   84 (115)
T 1egx_A           10 RATVMLYDDGN---KRWLPAGTGPQAFS--RVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRD   84 (115)
T ss_dssp             EEECBEECTTT---SSCCBSSCSCCCCE--EEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCCSSTTEEEEES
T ss_pred             EEEEEEEcCCC---CceeECCCCCCCcc--EEEEEEeCCCCEEEEEEEEcCCCCEEEEeeEEcCCceEEecCccceEEec
Confidence            35666664333   45976654   232  445567899999999999988 7788888888899999999999999998


Q ss_pred             CCCCCcceeeccChhchhHHhhh
Q psy4624         115 PNTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       115 ~~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      ..  .-|||||.|++||++|.+-
T Consensus        85 ~~--~~~GLnF~se~eA~~F~~~  105 (115)
T 1egx_A           85 AR--QVWGLNFGSKEDAAQFAAG  105 (115)
T ss_dssp             SS--CEEEEEESSHHHHHHHHHH
T ss_pred             CC--EEEEEecCCHHHHHHHHHH
Confidence            85  6999999999999999763

>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4

Probab=97.72  E-value=0.00013  Score=53.14  Aligned_cols=96  Identities=22%  Similarity=0.371  Sum_probs=72.2

Q ss_pred             hhhhhhhhhhccCCCCccceeEeec---CceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEe
Q psy4624          36 LRLWAEVFHVSASGAGSVKWQQVSE---DLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYW  112 (160)
Q Consensus        36 lRlwAEvFhvSa~~~g~vkWqqvse---dLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YW  112 (160)
                      .+.=|-||....+.   -+|.-...   .|+.|.|..-..  ..-|-|-..+.+..+++--+-+-++-...+++.-|-=|
T Consensus         7 ~~~~A~V~~~d~~~---~~W~~~g~G~~~l~~V~i~~~~~--~~~~Riv~~~~~~~~vi~n~~i~~~~~y~~~~~~Fh~w   81 (130)
T 1qc6_A            7 CQARASVMVYDDTS---KKWVPIKPGQQGFSRINIYHNTA--SSTFRVVGVKLQDQQVVINYSIVKGLKYNQATPTFHQW   81 (130)
T ss_dssp             EEEEEEEEEEETTT---TEEEECC-----CEEEEEEEETT--TTEEEEEEECTTTCCEEEEEECCTTCEEEEEETTEEEE
T ss_pred             EEEEEEEEEECCCC---CceeECCCCceeeeEEEEEecCC--CcEEEEEEEeCCCCeEEEeeEEeCCcEEeccCCeeEEE
Confidence            34446666665433   57987764   355666666443  66777777765677888888899999999999999999


Q ss_pred             cCCCCCCcceeeccChhchhHHhhhc
Q psy4624         113 KDPNTNDTWGLNFTSPIDARQFRECC  138 (160)
Q Consensus       113 kd~~t~dTwGlNFtSp~Da~qFrEcc  138 (160)
                      +|.  ...+||||.|++||++|.+--
T Consensus        82 ~~~--~~~~GL~F~se~eA~~F~~~~  105 (130)
T 1qc6_A           82 RDA--RQVYGLNFASKEEATTFSNAM  105 (130)
T ss_dssp             ECS--SCEEEEEESCHHHHHHHHHHH
T ss_pred             EcC--CEEEEEecCCHHHHHHHHHHH
Confidence            987  479999999999999998753

>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4

Probab=89.68  E-value=1.2  Score=34.11  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=58.0

Q ss_pred             cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchh
Q psy4624          53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDAR  132 (160)
Q Consensus        53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~  132 (160)
                      .+|.-.-   .= .+.-+.|.+.+.+.|--+.-+..++|=-|=+--+-...+.-.-|--|.+  ....+||||.+.++|+
T Consensus        57 ~~W~~~~---~G-al~~VkD~~~rsyf~RlvDl~~~~viweqELY~~f~Y~~~r~~FHtFe~--d~c~~GLnFade~EA~  130 (152)
T 1mke_A           57 CMWSKKC---SG-VACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAG--DTCQVALNFANEEEAK  130 (152)
T ss_dssp             TEEEEEE---EE-EEEEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEEC--SSSEEEEEESSHHHHH
T ss_pred             CceEecC---ce-EEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEEec--CCcEEEEeeCCHHHHH
Confidence            5787542   22 2455778888888887777766676666666667777778888988984  4556999999999999


Q ss_pred             HHhh
Q psy4624         133 QFRE  136 (160)
Q Consensus       133 qFrE  136 (160)
                      +|..
T Consensus       131 ~F~~  134 (152)
T 1mke_A          131 KFRK  134 (152)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3

Probab=88.86  E-value=1.7  Score=32.30  Aligned_cols=85  Identities=12%  Similarity=0.080  Sum_probs=58.8

Q ss_pred             ceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEec--CCC--CCCcceeeccChh
Q psy4624          54 KWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWK--DPN--TNDTWGLNFTSPI  129 (160)
Q Consensus        54 kWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWk--d~~--t~dTwGlNFtSp~  129 (160)
                      .|+.-----+=++.....|.+.--+-|-..+.++-||+==-.+-|+-.+.+++.-++-|.  |+.  .-.+|.+.|-+++
T Consensus        45 ~WkERG~G~lkil~~k~~~~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~~~~~k~~~~~~~d~~d~~~~~~lirfk~~e  124 (150)
T 2crf_A           45 SWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIHITAMDTEDQGVKVFLISASSKD  124 (150)
T ss_dssp             EEEEEEEEEEEEEEEECSSSCSEEEEEEEEESSSCCEEEEEECCTTCCEECCSSSEEEEEEEBSSSCCEEEEEEECCHHH
T ss_pred             CcccceeEEEEEEeccccCCCCccEEEEEEEcCcceEEeeeeccCCceeecCCCCEEEEEeecCCCCceEEEEEEECCHH
Confidence            455443333333433322322344566667777888888888899999999999999998  442  2459999999999


Q ss_pred             chhHHhhhc
Q psy4624         130 DARQFRECC  138 (160)
Q Consensus       130 Da~qFrEcc  138 (160)
                      +|+.|.+..
T Consensus       125 ~a~lf~~~~  133 (150)
T 2crf_A          125 TGQLYAALH  133 (150)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999997653

>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}

Probab=88.68  E-value=1.2  Score=34.50  Aligned_cols=78  Identities=15%  Similarity=0.278  Sum_probs=55.7

Q ss_pred             cceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchh
Q psy4624          53 VKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDAR  132 (160)
Q Consensus        53 vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~  132 (160)
                      -+|.-.-   .= .+.-+.|.+.+.+.|--+.-+..++|=.|=+--|-...+.-.-|.-|.  .....+||||.+.++|+
T Consensus        74 ~~W~~~~---~G-al~~vkD~~~rsyf~RlvDl~~~~vvweqELY~~f~Y~~~r~~FHtFe--~d~c~~GLnFade~EA~  147 (169)
T 2ifs_A           74 CMWSKKC---SG-VACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFA--GDTCQVALNFANEEEAK  147 (169)
T ss_dssp             TEEEEEE---EE-EEEEEEETTTTEEEEEEEETTTCCCCEEEECCSSCCCBCCCSSEEEEE--CSSSEEEEECSCHHHHH
T ss_pred             CeeEecC---ce-EEEEEEECCCCeEEEEEEEccCCeEEEEeecccceeeccCCCeEEEee--cCCcEEEEeeCCHHHHH
Confidence            5787542   22 245567888887777766666556555555555677777778888898  34566999999999999


Q ss_pred             HHhh
Q psy4624         133 QFRE  136 (160)
Q Consensus       133 qFrE  136 (160)
                      +|..
T Consensus       148 ~F~~  151 (169)
T 2ifs_A          148 KFRK  151 (169)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9975

>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A

Probab=85.51  E-value=1.2  Score=32.49  Aligned_cols=60  Identities=12%  Similarity=0.154  Sum_probs=43.3

Q ss_pred             EEEEeeecccceEEEEEeecCCCcceece---eeEEEecCCC--CCCcceeeccChhchhHHhhh
Q psy4624          78 FLITAYNSQVDKILDVKLVQPGTRIGQAS---ECFVYWKDPN--TNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus        78 fHITAynsqvdkILdvqL~qp~t~i~~~S---~cF~YWkd~~--t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      +-|-..+.++-||+==-.+-|+-.+...+   ..|+.|.++.  .-.+|.+.|-|+++|++|.+-
T Consensus        50 ~RllmR~d~~~kv~lN~~i~~~m~~~~~~~~~~~~v~~~~~~dgk~~~~~lrfks~e~A~~f~~~  114 (130)
T 3n7c_A           50 VRVLCRSEGMGHVLLNTSVVKSFKYQPIDADNENLIKWPIITDGKLETFIIKVKQKADGRRLVGA  114 (130)
T ss_dssp             EEEEEEC-CCCCEEEEEECCTTBCCEESCTTCTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEEecCCceEEeeccccCCcEEeEcCCCCccEEEEEecCCCceEEEEEEECCHHHHHHHHHH
Confidence            44555566777887777778888777764   5778786331  236899999999999999763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1i2ha_	145	b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxI	1e-26
d1evha_	111	b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId	2e-10
d1xoda1	114	b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-c	3e-04
d1mkea1	114	b.55.1.4 (A:31-144) Actin regulatory protein WASP	0.001

>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Homer
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.8 bits (238), Expect = 1e-26
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 6/99 (6%)

Query: 40  AEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPG 99
           A VF +         W   S+  V V+     D+   ++ I + +    K +    + P 
Sbjct: 13  AHVFQID--PNTKKNWVPTSKHAVTVSY--FYDSTRNVYRIISLDGS--KAIINSTITPN 66

Query: 100 TRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRECC 138
               + S+ F  W D   N  +GL F+S     +F E  
Sbjct: 67  MTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEKF 105

>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]} Length = 111

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Enabled
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.7 bits (126), Expect = 2e-10
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 54  KWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWK 113
           KW           +       N  F +     Q  +++    +  G +  QA++ F  W+
Sbjct: 21  KWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWR 80

Query: 114 DPNTNDTWGLNFTSPIDARQFRE 136
           D      +GLNF S  DA  F  
Sbjct: 81  DARQ--VYGLNFGSKEDANVFAS 101

>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]} Length = 114

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Sprouty-related, EVH1 domain-containing protein 1, Spred-1
species: Western clawed frog (Xenopus tropicalis) [TaxId: 8364]

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 44  HVSASGAGSVKWQQVS-EDLVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPG 99
            V      S  W Q+    L  V ++      D+    FL+     +   ++   +++  
Sbjct: 8   VVMTRDDSSGGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRD 67

Query: 100 TRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE 136
               + +  F +W+  +    +GL F SP DAR F  
Sbjct: 68  LVYNKVTPTFHHWRIGDKK--FGLTFQSPADARAFDR 102

>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 114

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.4 bits (79), Expect = 0.001
 Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 67  ITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFT 126
              ++D P   + +  ++ +  K+L  + +            F  +          LNF 
Sbjct: 37  ACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAGDTCQ--VALNFA 94

Query: 127 SPIDARQFRE 136
           +  +A++FR+
Sbjct: 95  NEEEAKKFRK 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1i2ha_	145	Homer {Rat (Rattus norvegicus) [TaxId: 10116]}	99.74
d1evha_	111	Enabled {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1xoda1	114	Sprouty-related, EVH1 domain-containing protein 1,	97.81
d1egxa_	115	Vasodilator-stimulated phosphoprotein (VASP) {Huma	97.73
d1mkea1	114	Actin regulatory protein WASP {Rat (Rattus norvegi	97.72
d1xkea1	118	Ran-binding protein 2 {Human (Homo sapiens) [TaxId	84.98
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	80.87

>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Homer
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=1.5e-18  Score=132.73  Aligned_cols=98  Identities=22%  Similarity=0.388  Sum_probs=88.1

Q ss_pred             hhhhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCC
Q psy4624          38 LWAEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNT  117 (160)
Q Consensus        38 lwAEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t  117 (160)
                      .=|+||+++...  .-+|..+++.+++|+|  ++|.++.+|+|.+.+  +.+++...++.||...++++.+|-+|+|+.+
T Consensus        11 ~rA~V~~~d~~t--kk~W~P~s~~~s~V~i--~~~~~~~~yRIvg~~--d~~vvin~~i~~~l~y~kas~~FhqWrd~r~   84 (145)
T d1i2ha_          11 TRAHVFQIDPNT--KKNWVPTSKHAVTVSY--FYDSTRNVYRIISLD--GSKAIINSTITPNMTFTKTSQKFGQWADSRA   84 (145)
T ss_dssp             EEEEEEEECTTS--SCCSEESCSSCEEEEE--EEETTTTEEEEEEEE--TTEEEEEEECCTTCCEEEEETTEEEEEETTT
T ss_pred             EEEEEEEECCCC--CceeEECCCCceEEEE--EEcCCCceEEEEEec--CCeEEEEeeccCCceeeecccceeEeeeccc
Confidence            348899997554  2369999999988777  889999999999986  5699999999999999999999999999999


Q ss_pred             CCcceeeccChhchhHHhhhcccc
Q psy4624         118 NDTWGLNFTSPIDARQFRECCVST  141 (160)
Q Consensus       118 ~dTwGlNFtSp~Da~qFrEcc~~~  141 (160)
                      ++.|||||.|++||++|.|++..+
T Consensus        85 ~~V~GL~F~s~~da~~F~~~~~~a  108 (145)
T d1i2ha_          85 NTVYGLGFSSEHHLSKFAEKFQEF  108 (145)
T ss_dssp             TEEEEEEESSHHHHHHHHHHHHHH
T ss_pred             cceeecccCCHHHHHHHHHHHHHH
Confidence            999999999999999999987766

>d1evha_ b.55.1.4 (A:) Enabled {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Enabled
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=9e-10  Score=76.46  Aligned_cols=93  Identities=23%  Similarity=0.348  Sum_probs=81.7

Q ss_pred             hhhhhhccCCCCccceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCC
Q psy4624          40 AEVFHVSASGAGSVKWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTND  119 (160)
Q Consensus        40 AEvFhvSa~~~g~vkWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~d  119 (160)
                      |.||....++   -+|+.....-..++|+-+++.+...+.|..+..++.||+--..+.|+..+.+.+.+|.-|.+.  ..
T Consensus        10 Akl~~~d~~~---~~Wk~rG~g~~~~~v~il~~~~~~~~Rivmrr~~~~kv~~N~~i~~~~~y~~~~~~~~~w~~~--~~   84 (111)
T d1evha_          10 AAVMVYDDAN---KKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQVVINCAIPKGLKYNQATQTFHQWRDA--RQ   84 (111)
T ss_dssp             EEEEEEETTT---TEEEEGGGCCSCEEEEEEEETTTTEEEEEEEETTTCCEEEEEEECTTCCCBCCSSSEEEEECS--SC
T ss_pred             EEEEEEeCCC---CcccccCCCceeEEEEEEEeCCCCEEEEEEEEccCCeEEEEEeccCccceecCCCceEEEecC--ce
Confidence            4556665544   579998877777888889999999999999999999999999999999999999999999964  56


Q ss_pred             cceeeccChhchhHHhhh
Q psy4624         120 TWGLNFTSPIDARQFREC  137 (160)
Q Consensus       120 TwGlNFtSp~Da~qFrEc  137 (160)
                      .||+||.+++||++|.+.
T Consensus        85 ~fglrF~~~e~A~~F~~~  102 (111)
T d1evha_          85 VYGLNFGSKEDANVFASA  102 (111)
T ss_dssp             EEEEEESSHHHHHHHHHH
T ss_pred             EEEEEcCCHHHHHHHHHH
Confidence            899999999999999874

>d1xoda1 b.55.1.4 (A:10-123) Sprouty-related, EVH1 domain-containing protein 1, Spred-1 {Western clawed frog (Xenopus tropicalis) [TaxId: 8364]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Sprouty-related, EVH1 domain-containing protein 1, Spred-1
species: Western clawed frog (Xenopus tropicalis) [TaxId: 8364]

Probab=97.81  E-value=1.4e-05  Score=57.68  Aligned_cols=93  Identities=23%  Similarity=0.357  Sum_probs=68.3

Q ss_pred             hhhhhhccCCCCccceeEeecC-ceeeeeeeee---cCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCC
Q psy4624          40 AEVFHVSASGAGSVKWQQVSED-LVPVNITCIQ---DAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDP  115 (160)
Q Consensus        40 AEvFhvSa~~~g~vkWqqvsed-LvpVnItcIq---d~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~  115 (160)
                      |-|+.-.-+.   -+|.-+... |=.|+|..++   |.|...|-|-.+.-++..++--+-+-++-...+++..|-=|++.
T Consensus         7 A~Vm~~dd~t---k~W~P~gggglS~v~v~~~~~~~~~~~~~Y~I~g~~l~d~~vvi~~~l~~~~~Y~~~~~~FH~w~~~   83 (114)
T d1xoda1           7 AVVMTRDDSS---GGWLQLGGGGLSSVTVSKTLQPGDSGGTEFLVHGERLRDKTVVLECVLRRDLVYNKVTPTFHHWRIG   83 (114)
T ss_dssp             EEEEEECSSS---SCEEEGGGCCCEEEEEECC---------CCEEEEEETTTCCEEEEEECCTTCEEEEEETTEEEEEET
T ss_pred             EEEEEEeCCC---CceEecCCCCcceEEEEEEecCCCCCCceEEEEEEEccCCcEEEEEEecCCCEEecCCCceEEEEeC
Confidence            3444444333   568776543 3346666655   88888999999998888888888889999999999999999986


Q ss_pred             CCCCcceeeccChhchhHHhhh
Q psy4624         116 NTNDTWGLNFTSPIDARQFREC  137 (160)
Q Consensus       116 ~t~dTwGlNFtSp~Da~qFrEc  137 (160)
                      .  .-|||||.|++||++|.+-
T Consensus        84 ~--~~~GL~F~se~eA~~F~~~  103 (114)
T d1xoda1          84 D--KKFGLTFQSPADARAFDRG  103 (114)
T ss_dssp             T--EEEEEEESSHHHHHHHHHH
T ss_pred             C--EEEEEecCCHHHHHHHHHH
Confidence            4  4899999999999999763

>d1egxa_ b.55.1.4 (A:) Vasodilator-stimulated phosphoprotein (VASP) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Vasodilator-stimulated phosphoprotein (VASP)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=4.7e-05  Score=52.37  Aligned_cols=83  Identities=23%  Similarity=0.406  Sum_probs=65.2

Q ss_pred             cceeEeecC-ceeeeeeeeecCCCeEEEEEeeeccc-ceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhc
Q psy4624          53 VKWQQVSED-LVPVNITCIQDAPNCIFLITAYNSQV-DKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPID  130 (160)
Q Consensus        53 vkWqqvsed-LvpVnItcIqd~p~~vfHITAynsqv-dkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~D  130 (160)
                      -+|+-..-. +=-++|+-+++....-+-|-....++ .||+--..+-|+..+...+.-|.=|.+.  ...+||+|.+++|
T Consensus        21 k~WkerG~G~~~~~~vkil~~~~~~~~Riv~rr~~~~~kv~lN~~I~~~~~~~~~~~~f~~w~~~--~~~f~lrF~~~e~   98 (115)
T d1egxa_          21 KRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVVINCAIVRGVKYNQATPNFHQWRDA--RQVWGLNFGSKED   98 (115)
T ss_dssp             SSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEESSTTCCEEEEEEECSSCCCCCSSTTEEEEESS--SCEEEEEESSHHH
T ss_pred             CcceeCCCCcEEEEEEEEEecCCCceEEEEEEEEcCCCEEEEEeEECCCcceEEcCCcceeeccc--ceEEEEEeCCHHH
Confidence            356544322 22245666888888899999988786 4777667888999999999999999965  5689999999999


Q ss_pred             hhHHhhh
Q psy4624         131 ARQFREC  137 (160)
Q Consensus       131 a~qFrEc  137 (160)
                      |+.|.|.
T Consensus        99 A~~F~~~  105 (115)
T d1egxa_          99 AAQFAAG  105 (115)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>d1mkea1 b.55.1.4 (A:31-144) Actin regulatory protein WASP {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Enabled/VASP homology 1 domain (EVH1 domain)
domain: Actin regulatory protein WASP
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.72  E-value=4.6e-05  Score=53.01  Aligned_cols=69  Identities=16%  Similarity=0.259  Sum_probs=60.3

Q ss_pred             eeeeeecCCCeEEEEEeeecccceEEEEEeecCCCcceeceeeEEEecCCCCCCcceeeccChhchhHHhh
Q psy4624          66 NITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQASECFVYWKDPNTNDTWGLNFTSPIDARQFRE  136 (160)
Q Consensus        66 nItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~~S~cF~YWkd~~t~dTwGlNFtSp~Da~qFrE  136 (160)
                      -|+.+.|.+...++|--+.-+..++|=-+-+.|+..-.++...|.-|.+..  ..+||||.|++||++|.+
T Consensus        36 ~v~~v~d~~~~~~~l~v~d~~~~~vi~e~eI~~~~~Y~k~~~~Fh~~~~~~--~~~GL~F~~~~eA~~f~~  104 (114)
T d1mkea1          36 VACLVKDNPQRSYFLRIFDIKDGKLLWEQELYNNFVYNSPRGYFHTFAGDT--CQVALNFANEEEAKKFRK  104 (114)
T ss_dssp             EEEEEEETTTTEEEEEEECSSSCSEEEEEECCSSCCCBCSSSSEEEEECSS--SEEEEEESSHHHHHHHHH
T ss_pred             EEEEEEECCCCeEEEEEEECCCCeEEEEEEccCCcEEeccCCeEEEEEcCC--ceEEEeeCCHHHHHHHHH
Confidence            467888999999999999888878777777789999999999999998743  369999999999999976

>d1xkea1 b.55.1.3 (A:7-124) Ran-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Ran-binding domain
domain: Ran-binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.98  E-value=1.4  Score=29.08  Aligned_cols=80  Identities=14%  Similarity=0.208  Sum_probs=51.2

Q ss_pred             ceeEeecCceeeeeeeeecCCCeEEEEEeeecccceEEEEEeecCCCccee--ceeeEEEe------cCCCCCCcceeec
Q psy4624          54 KWQQVSEDLVPVNITCIQDAPNCIFLITAYNSQVDKILDVKLVQPGTRIGQ--ASECFVYW------KDPNTNDTWGLNF  125 (160)
Q Consensus        54 kWqqvsedLvpVnItcIqd~p~~vfHITAynsqvdkILdvqL~qp~t~i~~--~S~cF~YW------kd~~t~dTwGlNF  125 (160)
                      .|+..----+-++..    +..--+-|--.+-++-|++=-..+.|+..+..  .+....-|      .+.....+|.+-|
T Consensus        20 ~WkerG~G~lkilk~----~~~~~~RlvmR~d~~~kv~lN~~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~lrf   95 (118)
T d1xkea1          20 QWKERGLGNLKILKN----EVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKF   95 (118)
T ss_dssp             EEEEEEEEEEEEEEE----TTSSCEEEEEEETTTTEEEEEEECCTTSCEEECTTCSSCEEEEEEECSSSCSEEEEEEEEC
T ss_pred             ChhHhceeEEEEEEe----CCCCcEEEEEEECCCCcEEEEeEEcCCCccccccCCceEEEEeccccCCCCCceEEEEEEE
Confidence            465544443333322    22234555566667778887778888866653  34444444      3455678999999


Q ss_pred             cChhchhHHhhh
Q psy4624         126 TSPIDARQFREC  137 (160)
Q Consensus       126 tSp~Da~qFrEc  137 (160)
                      -+|++|++|.+-
T Consensus        96 k~~e~a~~f~~~  107 (118)
T d1xkea1          96 KTPELAEEFKQK  107 (118)
T ss_dssp             SSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHH
Confidence            999999999874

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.87  E-value=1.1  Score=26.51  Aligned_cols=62  Identities=11%  Similarity=0.117  Sum_probs=40.9

Q ss_pred             ccccccCCcchhhhhhhhhhhccCCCCccceeEe---ecCceeeeeeeeecCCCeEEEEEeeecc
Q psy4624          25 WQTSKRRDGHLLRLWAEVFHVSASGAGSVKWQQV---SEDLVPVNITCIQDAPNCIFLITAYNSQ   86 (160)
Q Consensus        25 wq~~~rrdghllRlwAEvFhvSa~~~g~vkWqqv---sedLvpVnItcIqd~p~~vfHITAynsq   86 (160)
                      |+......|.+...+-+...+..+......|..+   ..+-..++|+.++-.-.+.|=|.|+|.+
T Consensus        23 W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   87 (103)
T d1qg3a2          23 WAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGA   87 (103)
T ss_dssp             CCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEEEEEETT
T ss_pred             EEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEEEEEcCC
Confidence            6666666666655444433344444344556544   3555678999999999999999999954