Psyllid ID: psy477

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60
Protein Sequence
MDSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEKQ
Secondary Structure (PSIPRED)
cccccccccEEEEEEccccHHHHHHHHHHcccEEEEEEEEEcccEEEEEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEcccHHHHHHHHHHcccccEEEEEEcccccEEEEEEEEEcccccc
Coil and Loop (DISEMBL)
mdslsdkgILYLLVIKENDPEDIIHCLSqygfmgktlltrqvpgeklSVLKFTRSCDEKQ
Flexible Loop (DISEMBL)
mdslsdkgILYLLVIKENDPEDIIHCLSQYGFMGKTLLtrqvpgeklsvlkftrscdekq
Low Complexity Region (SEG)
MDSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEKQ
Disordered region (IsUnstruct)
*******GILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF********
Disordered Region (DISOPRED)
MDSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLK**RS*****
Disordered Region (DISEMBL)
MDSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEKQ
Disordered Region (DISPRO)
**SLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEKQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	60	2.2.26 [Sep-21-2011]
Q9Y5N5	214	HemK methyltransferase fa	no	N/A	0.9	0.252	0.537	1e-09

>sp|Q9Y5N5|HEMK2_HUMAN HemK methyltransferase family member 2 OS=Homo sapiens GN=N6AMT1 PE=1 SV=3

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS KG+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFT+S
Sbjct: 161 DLLSPKGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214

Heterodimeric methyltransferase that catalyzes N5-methylation of ETF1 on 'Gln-185', using S-adenosyl L-methionine as methyl donor. ETF1 needs to be complexed to ERF3 in its GTP-bound form to be efficiently methylated. May play a role in the modulation of arsenic-induced toxicity. May be involved in the conversion of monomethylarsonous acid (3+) into the less toxic dimethylarsonic acid.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
403271691	186	PREDICTED: hemK methyltransferase family	0.9	0.290	0.537	4e-08
403271689	214	PREDICTED: hemK methyltransferase family	0.9	0.252	0.537	4e-08
313104228	214	RecName: Full=HemK methyltransferase fam	0.9	0.252	0.537	5e-08
7717305	214	PRED28 [Homo sapiens]	0.9	0.252	0.537	5e-08
334329395	219	PREDICTED: hemK methyltransferase family	0.883	0.242	0.509	6e-08
134085718	214	N(6)-adenine-specific DNA methyltransfer	0.9	0.252	0.518	7e-08
348562869	186	PREDICTED: hemK methyltransferase family	0.9	0.290	0.537	7e-08
348562867	214	PREDICTED: hemK methyltransferase family	0.9	0.252	0.537	7e-08
338720651	221	PREDICTED: hemK methyltransferase family	0.9	0.244	0.518	9e-08
402862563	210	PREDICTED: hemK methyltransferase family	0.9	0.257	0.518	1e-07

>gi|403271691|ref|XP_003927748.1| PREDICTED: hemK methyltransferase family member 2-like isoform 2 [Saimiri boliviensis boliviensis]

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFTRS
Sbjct: 133 DLLSPRGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTRS 186

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403271689|ref|XP_003927747.1| PREDICTED: hemK methyltransferase family member 2-like isoform 1 [Saimiri boliviensis boliviensis]

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFTRS
Sbjct: 161 DLLSPRGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTRS 214

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|313104228|sp|Q9Y5N5.3|HEMK2_HUMAN RecName: Full=HemK methyltransferase family member 2; AltName: Full=M.HsaHemK2P; AltName: Full=N(6)-adenine-specific DNA methyltransferase 1

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS KG+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFT+S
Sbjct: 161 DLLSPKGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|7717305|emb|CAB90428.1| PRED28 [Homo sapiens]

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS KG+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFT+S
Sbjct: 161 DLLSPKGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334329395|ref|XP_001373458.2| PREDICTED: hemK methyltransferase family member 2-like [Monodelphis domestica]

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/53 (50%), Positives = 38/53 (71%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54
           D LS +G  YL+ IKEN+P++I+  + +YG  G T+L+RQ  GE LSVLKF +
Sbjct: 166 DLLSREGFFYLVAIKENNPDEIMETMKKYGLHGITVLSRQAGGETLSVLKFNK 218

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|134085718|ref|NP_001076982.1| N(6)-adenine-specific DNA methyltransferase 1 [Bos taurus] gi|133778119|gb|AAI23688.1| N6AMT1 protein [Bos taurus] gi|296491636|tpg|DAA33669.1| TPA: N-6 adenine-specific DNA methyltransferase 1 [Bos taurus] gi|440895318|gb|ELR47540.1| HemK methyltransferase family member 2 [Bos grunniens mutus]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  +   G  G T+L+RQ   E LSVLKFT+S
Sbjct: 161 DLLSPRGLFYLVTIKENNPEEILKIMKTKGLQGTTVLSRQAGQEMLSVLKFTKS 214

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348562869|ref|XP_003467231.1| PREDICTED: hemK methyltransferase family member 2-like isoform 2 [Cavia porcellus]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  L   G  G T L+RQ   E LSVLKFT+S
Sbjct: 133 DLLSPRGLFYLVTIKENNPEEILKTLKTKGLHGTTALSRQAGQESLSVLKFTKS 186

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348562867|ref|XP_003467230.1| PREDICTED: hemK methyltransferase family member 2-like isoform 1 [Cavia porcellus]

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  L   G  G T L+RQ   E LSVLKFT+S
Sbjct: 161 DLLSPRGLFYLVTIKENNPEEILKTLKTKGLHGTTALSRQAGQESLSVLKFTKS 214

Source: Cavia porcellus

Species: Cavia porcellus

Genus: Cavia

Family: Caviidae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|338720651|ref|XP_001496250.3| PREDICTED: hemK methyltransferase family member 2-like [Equus caballus]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LS+LKFTRS
Sbjct: 161 DLLSPRGLFYLVTIKENNPEEILKTMKTKGLQGTTALSRQAGQELLSILKFTRS 214

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402862563|ref|XP_003895623.1| PREDICTED: hemK methyltransferase family member 2-like [Papio anubis]

 Score = 60.8 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query: 2   DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
           D LS +G+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFT+S
Sbjct: 157 DLLSPRGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 210

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	60
UNIPROTKB|Q9Y5N5	214	N6AMT1 "HemK methyltransferase	0.9	0.252	0.537	6.6e-10
UNIPROTKB|A4FV35	214	N6AMT1 "N6AMT1 protein" [Bos t	0.9	0.252	0.518	8.4e-10
UNIPROTKB|I3L8U7	70	LOC100623424 "Uncharacterized	0.866	0.742	0.519	2.2e-09
FB|FBgn0031454	224	CG9960 [Drosophila melanogaste	0.883	0.236	0.471	3.9e-08
ZFIN|ZDB-GENE-040718-206	219	n6amt1 "N-6 adenine-specific D	0.983	0.269	0.389	4.7e-08
RGD|1311843	214	N6amt1 "N-6 adenine-specific D	0.866	0.242	0.480	7.2e-08
UNIPROTKB|E1C233	217	N6AMT1 "Uncharacterized protei	0.883	0.244	0.433	1e-07
DICTYBASE|DDB_G0292048	257	DDB_G0292048 "N(6)-adenine-spe	0.85	0.198	0.392	1.5e-05
CGD|CAL0004742	224	orf19.331 [Candida albicans (t	0.85	0.227	0.372	0.00084

UNIPROTKB|Q9Y5N5 N6AMT1 "HemK methyltransferase family member 2" [Homo sapiens (taxid:9606)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:     2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
             D LS KG+ YL+ IKEN+PE+I+  +   G  G T L+RQ   E LSVLKFT+S
Sbjct:   161 DLLSPKGLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0008276 "protein methyltransferase activity" evidence=IDA

GO:0030307 "positive regulation of cell growth" evidence=IDA

GO:0043234 "protein complex" evidence=IDA

GO:0006479 "protein methylation" evidence=IDA

UNIPROTKB|A4FV35 N6AMT1 "N6AMT1 protein" [Bos taurus (taxid:9913)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query:     2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
             D LS +G+ YL+ IKEN+PE+I+  +   G  G T+L+RQ   E LSVLKFT+S
Sbjct:   161 DLLSPRGLFYLVTIKENNPEEILKIMKTKGLQGTTVLSRQAGQEMLSVLKFTKS 214

GO:0043234 "protein complex" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|I3L8U7 LOC100623424 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 27/52 (51%), Positives = 37/52 (71%)

Query:     4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
             LS +G+ YL+ IKEN+PE+I+  +   G  G T+L+RQ   E LSVLKFT+S
Sbjct:    12 LSPRGLFYLVTIKENNPEEILKTMKTKGLQGTTVLSRQAGQEMLSVLKFTKS 63

GO:0008276 "protein methyltransferase activity" evidence=IEA

FB|FBgn0031454 CG9960 [Drosophila melanogaster (taxid:7227)]

 Score = 127 (49.8 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 25/53 (47%), Positives = 35/53 (66%)

Query:     2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54
             D LS +G+LYLL+++EN PE+II  L    F     + R++PGE L +LK TR
Sbjct:   167 DILSPRGVLYLLLLRENKPEEIIKYLEGLQFRAVKFMERRIPGEHLCILKVTR 219

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0032259 "methylation" evidence=IEA

ZFIN|ZDB-GENE-040718-206 n6amt1 "N-6 adenine-specific DNA methyltransferase 1 (putative)" [Danio rerio (taxid:7955)]

 Score = 126 (49.4 bits), Expect = 4.7e-08, P = 4.7e-08
 Identities = 23/59 (38%), Positives = 39/59 (66%)

Query:     2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEKQ 60
             D LS+ G+ YL+ + +NDPE I+  L++ G  G   LTRQ   E L++L+F+++ ++ Q
Sbjct:   159 DLLSEHGLFYLVTVSDNDPEGIVDLLARSGLDGHLCLTRQAGRETLTILRFSKTAEKTQ 217

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0032259 "methylation" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1311843 N6amt1 "N-6 adenine-specific DNA methyltransferase 1 (putative)" [Rattus norvegicus (taxid:10116)]

 Score = 124 (48.7 bits), Expect = 7.2e-08, P = 7.2e-08
 Identities = 25/52 (48%), Positives = 34/52 (65%)

Query:     4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
             LS +G+ YL+ IKEN+PE+I   +   G  G T L RQ   E LSVL+F++S
Sbjct:   163 LSPRGLFYLVTIKENNPEEIFKIMKTRGLQGTTALCRQAGQETLSVLRFSKS 214

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0006479 "protein methylation" evidence=ISO

GO:0008276 "protein methyltransferase activity" evidence=IEA;ISO

GO:0030307 "positive regulation of cell growth" evidence=IEA;ISO

GO:0043234 "protein complex" evidence=IEA;ISO

UNIPROTKB|E1C233 N6AMT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 123 (48.4 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 23/53 (43%), Positives = 37/53 (69%)

Query:     2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54
             D LS  G+ YL+ IKEN+P++I+  ++++G  G  LL+RQ   E L++LKF +
Sbjct:   164 DLLSTGGLFYLVTIKENNPDEILETMTKHGLEGTRLLSRQAGQEMLTILKFRK 216

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0030307 "positive regulation of cell growth" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

DICTYBASE|DDB_G0292048 DDB_G0292048 "N(6)-adenine-specific DNA methyltransferase 1" [Dictyostelium discoideum (taxid:44689)]

 Score = 106 (42.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query:     4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54
             LS KG  Y+++++EN P+ +I  L +YGF  K +  R+   E L ++KF R
Sbjct:   173 LSKKGFFYIVLVQENKPKQVISILGEYGFSYKVVGKRKARNELLYIIKFYR 223

GO:0032259 "methylation" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

GO:0008168 "methyltransferase activity" evidence=IEA

GO:0006479 "protein methylation" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

CGD|CAL0004742 orf19.331 [Candida albicans (taxid:5476)]

 Score = 89 (36.4 bits), Expect = 0.00084, P = 0.00084
 Identities = 19/51 (37%), Positives = 28/51 (54%)

Query:     4 LSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR 54
             LS  G+ Y+L    N PE +   +   G+  + ++ R+   E LSVLKFTR
Sbjct:   173 LSKSGVAYILFCARNKPETVTSIMQSKGWNVEVVINRKAGWEVLSVLKFTR 223


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.139   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       60        60   0.00091  102 3  11 22  0.38    28
                                                     29  0.37    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  472 (50 KB)
  Total size of DFA:  82 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.77u 0.09s 6.86t   Elapsed:  00:00:14
  Total cpu time:  6.77u 0.09s 6.86t   Elapsed:  00:00:14
  Start:  Thu Aug 15 11:33:44 2013   End:  Thu Aug 15 11:33:58 2013

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0035657 "eRF1 methyltransferase complex" evidence=IEA

GO:0018364 "peptidyl-glutamine methylation" evidence=IEA

GO:0006417 "regulation of translation" evidence=IEA

GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=IEA

GO:0008276 "protein methyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	60
KOG3191|consensus	209		99.7
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	98.66
PRK14968	188	putative methyltransferase; Provisional	97.66
PRK14967	223	putative methyltransferase; Provisional	96.78
TIGR03704	251	PrmC_rel_meth putative protein-(glutamine-N5) meth	96.02
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	94.7
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.41
COG2890	280	HemK Methylase of polypeptide chain release factor	93.57
PF05175	170	MTS: Methyltransferase small domain; InterPro: IPR	93.29
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	92.4
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	92.33
PRK01544	506	bifunctional N5-glutamine S-adenosyl-L-methionine-	90.38
PRK14966	423	unknown domain/N5-glutamine S-adenosyl-L-methionin	90.35
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	90.22
PF05148	219	Methyltransf_8: Hypothetical methyltransferase; In	89.59
PRK07402	196	precorrin-6B methylase; Provisional	89.27
TIGR00438	188	rrmJ cell division protein FtsJ.	88.66
TIGR03534	251	RF_mod_PrmC protein-(glutamine-N5) methyltransfera	87.62
COG4123	248	Predicted O-methyltransferase [General function pr	87.49
TIGR00091	194	tRNA (guanine-N(7)-)-methyltransferase. In E. coli	83.82
PLN02233	261	ubiquinone biosynthesis methyltransferase	83.51
KOG3045|consensus	325		82.88
PRK09328	275	N5-glutamine S-adenosyl-L-methionine-dependent met	82.54
KOG0862|consensus	216		81.68
KOG1271|consensus	227		80.31

>KOG3191|consensus

Probab=99.70  E-value=3.8e-17  Score=108.74  Aligned_cols=54  Identities=41%  Similarity=0.767  Sum_probs=52.4

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~   55 (60)
                      ++|||+|+||||++..|+|+||++.|++.||.+.++.+||+++|+|+|+||+|+
T Consensus       156 ~iLSp~Gv~Ylv~~~~N~p~ei~k~l~~~g~~~~~~~~Rk~~~E~l~ilkf~r~  209 (209)
T KOG3191|consen  156 DILSPRGVFYLVALRANKPKEILKILEKKGYGVRIAMQRKAGGETLSILKFTRS  209 (209)
T ss_pred             hhcCcCceEEeeehhhcCHHHHHHHHhhcccceeEEEEEecCCceEEEEEEEeC
Confidence            589999999999999999999999999999999999999999999999999984

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=98.66  E-value=1.2e-07  Score=59.76  Aligned_cols=52  Identities=23%  Similarity=0.217  Sum_probs=49.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFT   53 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~   53 (60)
                      ++|+|+|+++++....++..++.+.|++.||..+++.+.+.+.|+|+++|.|
T Consensus       128 ~~Lk~gG~~~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~~~~~~~~~~~~  179 (179)
T TIGR00537       128 EILKEGGRVQLIQSSLNGEPDTFDKLDERGFRYEIVAERGLFFEELFAIKAW  179 (179)
T ss_pred             HhhCCCCEEEEEEeccCChHHHHHHHHhCCCeEEEEEEeecCceEEEEEEeC
Confidence            5789999999999999999999999999999999999999999999999976

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK14968 putative methyltransferase; Provisional

Probab=97.66  E-value=0.00026  Score=43.84  Aligned_cols=53  Identities=23%  Similarity=0.407  Sum_probs=47.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR   54 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r   54 (60)
                      ++|+|+|.++++..+..+.+++.+.|.+.||....+.++.+.++.+.++.+.+
T Consensus       136 ~~Lk~gG~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  188 (188)
T PRK14968        136 RYLKPGGRILLLQSSLTGEDEVLEYLEKLGFEAEVVAEEKFPFEELIVLELVK  188 (188)
T ss_pred             HhcCCCeEEEEEEcccCCHHHHHHHHHHCCCeeeeeeecccCCceEEEEEEeC
Confidence            57899999999998888889999999999999999999999999999887654

>PRK14967 putative methyltransferase; Provisional

Probab=96.78  E-value=0.0038  Score=40.69  Aligned_cols=43  Identities=21%  Similarity=0.251  Sum_probs=37.9

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPG   44 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~   44 (60)
                      ++|+|+|+++++.+..++++++++.+++.||..+...++..++
T Consensus       147 ~~Lk~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~  189 (223)
T PRK14967        147 ALLAPGGSLLLVQSELSGVERTLTRLSEAGLDAEVVASQWIPF  189 (223)
T ss_pred             HhcCCCcEEEEEEecccCHHHHHHHHHHCCCCeEEEEeeccCc
Confidence            4789999999999998899999999999999999888776655

>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific

Probab=96.02  E-value=0.014  Score=39.26  Aligned_cols=40  Identities=13%  Similarity=0.257  Sum_probs=34.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEee
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQV   42 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~   42 (60)
                      ++|+|+|++|+..... ..+++.+.|++.||..+++.++..
T Consensus       204 ~~L~~gG~l~l~~~~~-~~~~v~~~l~~~g~~~~~~~~~~~  243 (251)
T TIGR03704       204 DWLAPGGHLLVETSER-QAPLAVEAFARAGLIARVASSEEL  243 (251)
T ss_pred             HhcCCCCEEEEEECcc-hHHHHHHHHHHCCCCceeeEcccc
Confidence            5799999999887654 578999999999999998887655

This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=94.70  E-value=0.046  Score=34.99  Aligned_cols=36  Identities=14%  Similarity=0.207  Sum_probs=30.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      +.|+|+|++.+-++..+...++.+.+++.||..+++
T Consensus       133 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~~~~~  168 (198)
T PRK00377        133 EIIKKGGRIVIDAILLETVNNALSALENIGFNLEIT  168 (198)
T ss_pred             HHcCCCcEEEEEeecHHHHHHHHHHHHHcCCCeEEE
Confidence            468999999887888888899999999999976654

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.41  E-value=0.028  Score=36.33  Aligned_cols=35  Identities=20%  Similarity=0.096  Sum_probs=30.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      ++|+|+|.+++.....+-..++.+.|++.||..++
T Consensus       144 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~g~~~~~  178 (202)
T PRK00121        144 RKLKPGGEIHFATDWEGYAEYMLEVLSAEGGFLVS  178 (202)
T ss_pred             HHcCCCCEEEEEcCCHHHHHHHHHHHHhCcccccc
Confidence            47899999999988887788999999999998773

>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]

Probab=93.57  E-value=0.51  Score=32.40  Aligned_cols=52  Identities=19%  Similarity=0.091  Sum_probs=41.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~   55 (60)
                      ++|+| |.++++-+..|..++|.+.+.+.|+ ...+...+-.++...++.+.+.
T Consensus       226 ~~l~~-~g~l~le~g~~q~~~v~~~~~~~~~-~~~v~~~~d~~g~~rv~~~~~~  277 (280)
T COG2890         226 DILKP-GGVLILEIGLTQGEAVKALFEDTGF-FEIVETLKDLFGRDRVVLAKLR  277 (280)
T ss_pred             HHcCC-CcEEEEEECCCcHHHHHHHHHhcCC-ceEEEEEecCCCceEEEEEEec
Confidence            46888 5557888899999999999999998 6667777777777777776654

>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases

Probab=93.29  E-value=0.19  Score=31.51  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=25.8

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      ++|+|+|.+|++..+..+.+.+++..-  | .++++.+++
T Consensus       128 ~~Lk~~G~l~lv~~~~~~~~~~l~~~f--~-~~~~~~~~~  164 (170)
T PF05175_consen  128 RYLKPGGRLFLVINSHLGYERLLKELF--G-DVEVVAKNK  164 (170)
T ss_dssp             HHEEEEEEEEEEEETTSCHHHHHHHHH--S---EEEEEES
T ss_pred             HhccCCCEEEEEeecCCChHHHHHHhc--C-CEEEEEECC
Confidence            579999999999999988888744322  2 566665544

; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=92.40  E-value=0.34  Score=32.17  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=30.8

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      +.|+|+|.+++.-+..++.+++.+.+.+.||....+
T Consensus       201 ~~LkpgG~lilsgi~~~~~~~v~~~l~~~Gf~~~~~  236 (250)
T PRK00517        201 RLLKPGGRLILSGILEEQADEVLEAYEEAGFTLDEV  236 (250)
T ss_pred             HhcCCCcEEEEEECcHhhHHHHHHHHHHCCCEEEEE
Confidence            468999999988777888999999999999986643

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=92.33  E-value=0.17  Score=31.92  Aligned_cols=32  Identities=22%  Similarity=0.237  Sum_probs=28.3

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM   33 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~   33 (60)
                      +.|+|+|.+++..+...+.+++.+.+++.||.
T Consensus       119 ~~Lk~gG~lv~~~~~~~~~~~~~~~l~~~g~~  150 (187)
T PRK08287        119 AHLHPGGRLVLTFILLENLHSALAHLEKCGVS  150 (187)
T ss_pred             HhcCCCeEEEEEEecHhhHHHHHHHHHHCCCC
Confidence            56899999988877888899999999999986

>PRK01544 bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase; Reviewed

Probab=90.38  E-value=0.84  Score=33.77  Aligned_cols=47  Identities=13%  Similarity=0.169  Sum_probs=35.9

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSV   49 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~V   49 (60)
                      ++|+|+|.+++ -+..+.++++.+.+.+.||....+..=-.+.+...+
T Consensus       257 ~~L~~gG~l~l-Eig~~q~~~v~~~~~~~g~~~~~~~~D~~g~~R~v~  303 (506)
T PRK01544        257 QFLKPNGKIIL-EIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVIL  303 (506)
T ss_pred             HhccCCCEEEE-EECCchHHHHHHHHHhcCCCceEEEecCCCCceEEE
Confidence            47899999876 477889999999999999986655554555555444

>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional

Probab=90.35  E-value=1.1  Score=32.99  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=38.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF   52 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~   52 (60)
                      ++|+|+|.++ +-+..+.++++.+.+++.||..-.+..--.+.+...+.+.
T Consensus       369 ~~LkpgG~li-lEiG~~Q~e~V~~ll~~~Gf~~v~v~kDl~G~dR~v~~~~  418 (423)
T PRK14966        369 DRLAEGGFLL-LEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKY  418 (423)
T ss_pred             HhcCCCcEEE-EEECccHHHHHHHHHHHCCCcEEEEEEcCCCCcEEEEEEE
Confidence            4799999865 5557788999999999999986555666677788776553

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=90.22  E-value=2  Score=27.88  Aligned_cols=49  Identities=16%  Similarity=0.236  Sum_probs=35.3

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeC----CeEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVP----GEKLSVLK   51 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~----~E~L~Vlr   51 (60)
                      ++|+|+|.++++. ..+.+.++.+..+..||....+..-..+    .-|+.|+|
T Consensus       133 ~~LkpGG~lv~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (187)
T PRK00107        133 PLLKPGGRFLALK-GRDPEEEIAELPKALGGKVEEVIELTLPGLDGERHLVIIR  185 (187)
T ss_pred             HhcCCCeEEEEEe-CCChHHHHHHHHHhcCceEeeeEEEecCCCCCcEEEEEEe
Confidence            5799999988775 5577888888888889997765554433    33566665

>PF05148 Methyltransf_8: Hypothetical methyltransferase; InterPro: IPR007823 This family consists of uncharacterised eukaryotic proteins which are related to S-adenosyl-L-methionine-dependent methyltransferases

Probab=89.59  E-value=0.8  Score=31.28  Aligned_cols=53  Identities=19%  Similarity=0.364  Sum_probs=38.3

Q ss_pred             ceecCCCeEEE--EEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCC
Q psy477            2 DSLSDKGILYL--LVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCD   57 (60)
Q Consensus         2 ~~Ls~~G~~YL--v~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~   57 (60)
                      ++|.|+|.+++  |.|...++++-++.+.+.||...-   +...+-+.+.+.|.+..+
T Consensus       146 RvLK~~G~L~IAEV~SRf~~~~~F~~~~~~~GF~~~~---~d~~n~~F~~f~F~K~~~  200 (219)
T PF05148_consen  146 RVLKPGGILKIAEVKSRFENVKQFIKALKKLGFKLKS---KDESNKHFVLFEFKKIRK  200 (219)
T ss_dssp             HHEEEEEEEEEEEEGGG-S-HHHHHHHHHCTTEEEEE---EE--STTEEEEEEEE-SS
T ss_pred             heeccCcEEEEEEecccCcCHHHHHHHHHHCCCeEEe---cccCCCeEEEEEEEEcCc
Confidence            57999999877  456667899999999999999663   555677778888887553

; GO: 0008168 methyltransferase activity; PDB: 2ZFU_B.

>PRK07402 precorrin-6B methylase; Provisional

Probab=89.27  E-value=0.7  Score=29.33  Aligned_cols=53  Identities=13%  Similarity=-0.061  Sum_probs=30.7

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhC---CceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQY---GFMGKTLLTRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~---G~~~~vv~~rk~~~E~L~Vlr~~r~~   56 (60)
                      ++|+|+|.+.+.........++.+.+++.   |+++.-+..  -..+.++..+.++..
T Consensus       130 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  185 (196)
T PRK07402        130 QYLKPGGRLVATASSLEGLYAISEGLAQLQARNIEVVQAAV--NRLETRGFSQVFAAV  185 (196)
T ss_pred             HhcCCCeEEEEEeecHHHHHHHHHHHHhcCCCCceEEEEEh--hhcccccCcCeeecC
Confidence            46899999988887655545566666654   444333322  224555554544433

>TIGR00438 rrmJ cell division protein FtsJ

Probab=88.66  E-value=0.99  Score=28.45  Aligned_cols=29  Identities=17%  Similarity=0.344  Sum_probs=24.8

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQY   30 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~   30 (60)
                      +.|+|+|++++.....++.+++++.++..
T Consensus       134 ~~LkpgG~lvi~~~~~~~~~~~l~~l~~~  162 (188)
T TIGR00438       134 EVLKPKGNFVVKVFQGEEIDEYLNELRKL  162 (188)
T ss_pred             HHccCCCEEEEEEccCccHHHHHHHHHhh
Confidence            47899999999888888899999988774

>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific

Probab=87.62  E-value=1.1  Score=28.89  Aligned_cols=33  Identities=21%  Similarity=0.239  Sum_probs=26.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK   35 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~   35 (60)
                      ++|+|+|.+++.. ..+..+++.+.|++.||.--
T Consensus       205 ~~L~~gG~~~~~~-~~~~~~~~~~~l~~~gf~~v  237 (251)
T TIGR03534       205 RLLKPGGWLLLEI-GYDQGEAVRALFEAAGFADV  237 (251)
T ss_pred             HhcccCCEEEEEE-CccHHHHHHHHHHhCCCCce
Confidence            4689999987754 55678899999999999733

Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=87.49  E-value=2.2  Score=29.45  Aligned_cols=54  Identities=17%  Similarity=0.196  Sum_probs=38.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE---EEEeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL---LTRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv---~~rk~~~E~L~Vlr~~r~~   56 (60)
                      .+|+|+|.+++|.-.+. ..+|++.|++.+|...-+   ..+.--.=++.++.+.+++
T Consensus       158 ~~lk~~G~l~~V~r~er-l~ei~~~l~~~~~~~k~i~~V~p~~~k~A~~vLv~~~k~~  214 (248)
T COG4123         158 KLLKPGGRLAFVHRPER-LAEIIELLKSYNLEPKRIQFVYPKIGKAANRVLVEAIKGG  214 (248)
T ss_pred             HHccCCCEEEEEecHHH-HHHHHHHHHhcCCCceEEEEecCCCCCcceEEEEEEecCC
Confidence            46899999999987664 677899999988886632   2344444456777777654

>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase

Probab=83.82  E-value=1  Score=28.77  Aligned_cols=33  Identities=24%  Similarity=0.335  Sum_probs=25.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCC-ceE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYG-FMG   34 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G-~~~   34 (60)
                      ++|+|+|.+++..-...--+++++.+.+.+ |..
T Consensus       120 r~LkpgG~l~~~td~~~~~~~~~~~~~~~~~f~~  153 (194)
T TIGR00091       120 NVLKKGGVIHFKTDNEPLFEDMLKVLSENDLFEN  153 (194)
T ss_pred             HHhCCCCEEEEEeCCHHHHHHHHHHHHhCCCeEe
Confidence            478999999998766555677788888776 553

In E. coli, this protein flanks the DNA repair protein MutY, also called micA.

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=83.51  E-value=5.8  Score=26.59  Aligned_cols=17  Identities=18%  Similarity=0.243  Sum_probs=14.1

Q ss_pred             CHHHHHHHHhhCCceEE
Q psy477           19 DPEDIIHCLSQYGFMGK   35 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~   35 (60)
                      +++++.+.|++.||...
T Consensus       228 s~~el~~ll~~aGF~~~  244 (261)
T PLN02233        228 TGEELEKLALEAGFSSA  244 (261)
T ss_pred             CHHHHHHHHHHCCCCEE
Confidence            67888899999999854

>KOG3045|consensus

Probab=82.88  E-value=3.2  Score=29.72  Aligned_cols=52  Identities=21%  Similarity=0.445  Sum_probs=38.0

Q ss_pred             ceecCCCeEEEEE--eccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLV--IKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~--~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~   56 (60)
                      ++|.++|..|+-=  |..-|....++.+.+.||..+   ++...+-..+..-|.+.+
T Consensus       252 RiLk~gG~l~IAEv~SRf~dv~~f~r~l~~lGF~~~---~~d~~n~~F~lfefkK~~  305 (325)
T KOG3045|consen  252 RILKPGGLLYIAEVKSRFSDVKGFVRALTKLGFDVK---HKDVSNKYFTLFEFKKTP  305 (325)
T ss_pred             HHhccCceEEEEehhhhcccHHHHHHHHHHcCCeee---ehhhhcceEEEEEEecCC
Confidence            5899999999954  455677888899999999965   455555555666665544

>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=82.54  E-value=4.5  Score=26.49  Aligned_cols=31  Identities=26%  Similarity=0.305  Sum_probs=24.8

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM   33 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~   33 (60)
                      ++|+|+|.+++-. ..+..+++.+.+.+.||.
T Consensus       226 ~~Lk~gG~l~~e~-g~~~~~~~~~~l~~~gf~  256 (275)
T PRK09328        226 RYLKPGGWLLLEI-GYDQGEAVRALLAAAGFA  256 (275)
T ss_pred             HhcccCCEEEEEE-CchHHHHHHHHHHhCCCc
Confidence            5789999988754 445678899999999997

>KOG0862|consensus

Probab=81.68  E-value=1.7  Score=29.64  Aligned_cols=23  Identities=22%  Similarity=0.533  Sum_probs=20.1

Q ss_pred             ceecCCCeEEEEEeccCCHHHHH
Q psy477            2 DSLSDKGILYLLVIKENDPEDII   24 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~   24 (60)
                      .+++.+|+|||++|..+-|..+.
T Consensus        62 Hfli~~~Vcylvicd~~yP~kLA   84 (216)
T KOG0862|consen   62 HFLIESGVCYLVICDKSYPRKLA   84 (216)
T ss_pred             EEEecCCEEEEEEecCCCcHHHH
Confidence            46889999999999999998764

>KOG1271|consensus

Probab=80.31  E-value=3.2  Score=28.39  Aligned_cols=32  Identities=16%  Similarity=0.299  Sum_probs=25.1

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMG   34 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~   34 (60)
                      ++|||+|+|.+-.|--+ .+|+++.+...||+.
T Consensus       169 ~ll~~~gifvItSCN~T-~dELv~~f~~~~f~~  200 (227)
T KOG1271|consen  169 KLLSPGGIFVITSCNFT-KDELVEEFENFNFEY  200 (227)
T ss_pred             hccCCCcEEEEEecCcc-HHHHHHHHhcCCeEE
Confidence            57999999866655554 899999999988663

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	60
3q87_B	170	N6 adenine specific DNA methylase; SAM-methyltrans	6e-13

>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi} Length = 170

 Score = 58.3 bits (141), Expect = 6e-13
 Identities = 17/50 (34%), Positives = 32/50 (64%)

Query: 6   DKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS 55
             G+LYLLVI+ N P++++  L + G+  + L  R++ GE + ++K  +S
Sbjct: 115 TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKS 164

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	60
3q87_B	170	N6 adenine specific DNA methylase; SAM-methyltrans	98.32
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	97.79
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.0
4dzr_A	215	Protein-(glutamine-N5) methyltransferase, release	95.83
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	95.62
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	95.58
2zfu_A	215	Nucleomethylin, cerebral protein 1; nucleolar prot	94.72
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	94.45
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	94.45
3lcc_A	235	Putative methyl chloride transferase; halide methy	94.25
2a14_A	263	Indolethylamine N-methyltransferase; SGC,INMT, str	94.18
3lpm_A	259	Putative methyltransferase; structural genomics, p	94.11
2xyq_A	290	Putative 2'-O-methyl transferase; transferase-vira	93.95
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	93.86
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	93.69
2yxd_A	183	Probable cobalt-precorrin-6Y C(15)-methyltransfer	93.64
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	93.59
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	92.5
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	92.48
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	92.39
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	91.92
2frn_A	278	Hypothetical protein PH0793; structural genomics,	91.9
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	91.76
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	91.74
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	91.62
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	90.66
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	90.61
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	90.53
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	90.52
3i9f_A	170	Putative type 11 methyltransferase; structural gen	90.46
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	90.06
2i62_A	265	Nicotinamide N-methyltransferase; structural genom	89.99
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	89.66
1vlm_A	219	SAM-dependent methyltransferase; possible histamin	89.54
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	89.41
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	89.24
2g72_A	289	Phenylethanolamine N-methyltransferase; HET: SAM F	89.23
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	89.08
3bzb_A	281	Uncharacterized protein; RED ALGA, protein structu	89.01
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	88.98
3gnl_A	244	Uncharacterized protein, DUF633, LMOF2365_1472; st	88.84
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	88.75
2fpo_A	202	Methylase YHHF; structural genomics, putative meth	88.58
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	88.51
2p7i_A	250	Hypothetical protein; putative methyltransferase,	88.31
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	87.19
2b3t_A	276	Protein methyltransferase HEMK; translation termin	86.91
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	86.52
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	86.21
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	85.96
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	85.66
2ift_A	201	Putative methylase HI0767; NESG, Y767_haein, struc	85.31
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	84.97
3g2m_A	299	PCZA361.24; SAM-dependent methyltransferase, glyco	84.83
2ld4_A	176	Anamorsin; methyltransferase-like fold, alpha/beta	84.81
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	84.39
1jsx_A	207	Glucose-inhibited division protein B; methyltransf	84.33
3kr9_A	225	SAM-dependent methyltransferase; class I rossmann-	84.33
2esr_A	177	Methyltransferase; structural genomics, hypothetic	83.81
3lec_A	230	NADB-rossmann superfamily protein; PSI, MCSG, stru	83.59
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	83.03
3jwg_A	219	HEN1, methyltransferase type 12; 1.90A {Clostridiu	82.47
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	82.45
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	82.2
3f4k_A	257	Putative methyltransferase; structural genomics, P	81.54
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	81.46
3jwh_A	217	HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena	81.14
1wy7_A	207	Hypothetical protein PH1948; seven-stranded beta s	80.8
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	80.46
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	80.41
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	80.06

>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}

Probab=98.32  E-value=4.8e-06  Score=50.71  Aligned_cols=51  Identities=33%  Similarity=0.612  Sum_probs=48.3

Q ss_pred             CCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477            6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~   56 (60)
                      |+|.++++....+.++++.+.+++.||....+.+++.++|++++++.+++-
T Consensus       115 pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~~~~~  165 (170)
T 3q87_B          115 TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKSH  165 (170)
T ss_dssp             CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEEECC-
T ss_pred             CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEEeccc
Confidence            999999999999999999999999999999999999999999999999863

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=97.79  E-value=4.9e-05  Score=47.24  Aligned_cols=57  Identities=19%  Similarity=0.130  Sum_probs=44.5

Q ss_pred             ceecCCCeEEEEEecc-CCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCCCc
Q psy477            2 DSLSDKGILYLLVIKE-NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCDEK   59 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~-N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~~~   59 (60)
                      ++|+|+|.+++++... +..+++.+.+++.||..+.+ +...++....+++|.|++++.
T Consensus       167 ~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~g~~~~~~l~f~~~~~~~  224 (230)
T 3evz_A          167 DHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDI-KFKVGTRWRHSLIFFKGISEG  224 (230)
T ss_dssp             GGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEE-EECCCC-CEEEEEEECCC---
T ss_pred             HHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEE-EecCCCeEEEEEEEecccccc
Confidence            5799999999987654 45788999999999988865 557788999999999987653

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.00  E-value=0.0037  Score=36.82  Aligned_cols=37  Identities=22%  Similarity=0.307  Sum_probs=31.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~   38 (60)
                      ++|+|+|.+++......+.+++.+.+++.||..+++.
T Consensus       122 ~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~  158 (192)
T 1l3i_A          122 DKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNITE  158 (192)
T ss_dssp             HTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             HhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEEE
Confidence            4689999999988888889999999999999776543

>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}

Probab=95.83  E-value=0.017  Score=34.51  Aligned_cols=51  Identities=6%  Similarity=-0.002  Sum_probs=39.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHh--hCCceEEEEEEEeeCCeEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLS--QYGFMGKTLLTRQVPGEKLSVLKF   52 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~--~~G~~~~vv~~rk~~~E~L~Vlr~   52 (60)
                      ++|+|+|.++++....+..+++.+.+.  +.||....+.....+.+.+.+.+.
T Consensus       152 ~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~  204 (215)
T 4dzr_A          152 YVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR  204 (215)
T ss_dssp             GGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEE
T ss_pred             HHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEE
Confidence            579999997777777888999999999  899976555555666666655543

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=95.62  E-value=0.0067  Score=36.93  Aligned_cols=36  Identities=17%  Similarity=0.335  Sum_probs=31.1

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      +.|+|+|++++.....+..+++.+.+++.||..++.
T Consensus       130 ~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~  165 (204)
T 3e05_A          130 RRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVA  165 (204)
T ss_dssp             HHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEE
Confidence            468999999999888888999999999999966643

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.58  E-value=0.04  Score=33.10  Aligned_cols=55  Identities=11%  Similarity=-0.000  Sum_probs=41.7

Q ss_pred             ceecCCCeEEEEEeccC---------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCCC
Q psy477            2 DSLSDKGILYLLVIKEN---------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSCD   57 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~~   57 (60)
                      +.|+|+|.+++......               .++++.+.+++.||....+..+.. .-+-++..+...+.
T Consensus       129 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~-~p~~~l~~~~~~~~  198 (203)
T 3h2b_A          129 MAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR-FPHAYLTAEASLEH  198 (203)
T ss_dssp             HTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT-SSEEEEEEEECC--
T ss_pred             HHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC-Ccchhhhhhhhhhh
Confidence            46899999988875543               389999999999999887666555 77778777776543

>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}

Probab=94.72  E-value=0.086  Score=31.98  Aligned_cols=51  Identities=14%  Similarity=0.375  Sum_probs=36.5

Q ss_pred             ceecCCCeEEEEEecc--CCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKE--NDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~--N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~   55 (60)
                      ++|+|+|.+++.....  ..++++.+.+++.||....   ........+++.+.+.
T Consensus       139 ~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~---~~~~~~~~~~~~~~k~  191 (215)
T 2zfu_A          139 RVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS---KDLTNSHFFLFDFQKT  191 (215)
T ss_dssp             HHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE---EECCSTTCEEEEEEEC
T ss_pred             HhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE---EecCCCeEEEEEEEec
Confidence            4689999988875544  4689999999999998543   3444555566666664

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=94.45  E-value=0.095  Score=32.35  Aligned_cols=37  Identities=5%  Similarity=-0.115  Sum_probs=31.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~   38 (60)
                      +.|+|+|++++.....++..++.+.+++.|++..-+.
T Consensus       142 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i~  178 (204)
T 3njr_A          142 EWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRID  178 (204)
T ss_dssp             HHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             HhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEEE
Confidence            4689999999999888889999999999998866443

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=94.45  E-value=0.063  Score=32.43  Aligned_cols=36  Identities=17%  Similarity=0.146  Sum_probs=31.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++.....+..+++.+.+++.||....+
T Consensus       147 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~  182 (205)
T 3grz_A          147 SHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK  182 (205)
T ss_dssp             GGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred             HhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence            578999999998777888999999999999987643

>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}

Probab=94.25  E-value=0.067  Score=32.97  Aligned_cols=54  Identities=22%  Similarity=0.191  Sum_probs=40.4

Q ss_pred             ceecCCCeEEEEEeccC----------CHHHHHHHHhhCCceEEEEEE------EeeCCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKEN----------DPEDIIHCLSQYGFMGKTLLT------RQVPGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N----------~p~ei~~~~~~~G~~~~vv~~------rk~~~E~L~Vlr~~r~   55 (60)
                      +.|+|+|.++++.....          .++++.+.+++.||....+..      .+.+.|.+..+|+.+.
T Consensus       159 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~g~e~~~~~~~~~~  228 (235)
T 3lcc_A          159 ELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENPHAIPTRKGKEKLGRWKKINL  228 (235)
T ss_dssp             HHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECTTCCTTTTTSCEEEEEEESCC
T ss_pred             HHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecCCccccccCHHHHhhhhhccc
Confidence            46899999888765432          478999999999999765544      3455788888887653

>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15

Probab=94.18  E-value=0.24  Score=31.39  Aligned_cols=54  Identities=15%  Similarity=0.158  Sum_probs=36.6

Q ss_pred             ceecCCCeEEEEEeccC---------------CHHHHHHHHhhCCceEEEEEEEe--e-----CCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKEN---------------DPEDIIHCLSQYGFMGKTLLTRQ--V-----PGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------~p~ei~~~~~~~G~~~~vv~~rk--~-----~~E~L~Vlr~~r~   55 (60)
                      ++|.|+|.+.+...-..               .++++.+.+.+.||....+..-.  .     ..+.++.+.+.|.
T Consensus       185 r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~  260 (263)
T 2a14_A          185 SLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK  260 (263)
T ss_dssp             TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred             HHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence            57999999988753221               58899999999999876554421  1     1345666666654

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=94.11  E-value=0.13  Score=32.54  Aligned_cols=53  Identities=15%  Similarity=0.178  Sum_probs=38.4

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE---EeeCCeEEEEEEEEeC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT---RQVPGEKLSVLKFTRS   55 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~---rk~~~E~L~Vlr~~r~   55 (60)
                      ++|+|+|+++++. .....+++.+.+++.||....+..   +.-......++.+.+.
T Consensus       164 ~~LkpgG~l~~~~-~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~  219 (259)
T 3lpm_A          164 SLLKQGGKANFVH-RPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD  219 (259)
T ss_dssp             HHEEEEEEEEEEE-CTTTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred             HHccCCcEEEEEE-cHHHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence            4689999999865 445688899999999998765443   2223445778888775

>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*

Probab=93.95  E-value=0.032  Score=37.43  Aligned_cols=53  Identities=8%  Similarity=0.068  Sum_probs=39.4

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCce-EEEEEEEeeCCeEEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM-GKTLLTRQVPGEKLSVLKFTR   54 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~-~~vv~~rk~~~E~L~Vlr~~r   54 (60)
                      ++|+|+|.|++......+.+++.+.+++.||. ++++.+|.-..|...+=+-++
T Consensus       159 r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~~~  212 (290)
T 2xyq_A          159 QKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGANYL  212 (290)
T ss_dssp             HHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEEEC
T ss_pred             HhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCCcc
Confidence            46999999999877777788999999999886 445545666666665555444

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=93.86  E-value=0.11  Score=31.85  Aligned_cols=40  Identities=5%  Similarity=0.003  Sum_probs=29.8

Q ss_pred             ceecCCCeEEEEEeccC-----------CHHHHHHHHhhCCceEEEEEEEee
Q psy477            2 DSLSDKGILYLLVIKEN-----------DPEDIIHCLSQYGFMGKTLLTRQV   42 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N-----------~p~ei~~~~~~~G~~~~vv~~rk~   42 (60)
                      ++|+|+|.++++.....           .++++.+.+.+ ||+...+.....
T Consensus       128 r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~~~~  178 (203)
T 1pjz_A          128 ALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGGQDT  178 (203)
T ss_dssp             HHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEESSC
T ss_pred             HHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEeccccc
Confidence            46899999887776542           37889998888 998776655443

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=93.69  E-value=0.067  Score=33.18  Aligned_cols=52  Identities=12%  Similarity=0.042  Sum_probs=35.6

Q ss_pred             ceecCCCeEEEEEeccC--------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKEN--------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFT   53 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N--------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~   53 (60)
                      ++|+|+|++++......              .++++.+.+++.||....+.......+.++-++++
T Consensus       173 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~v~~~  238 (241)
T 2ex4_A          173 GSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSF  238 (241)
T ss_dssp             HHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCSCCTTSCEEEEE
T ss_pred             HhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCCCcchhhhhhhh
Confidence            46899999888543211              58999999999999877665554444544444443

>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}

Probab=93.64  E-value=0.12  Score=30.04  Aligned_cols=34  Identities=12%  Similarity=0.104  Sum_probs=29.9

Q ss_pred             CCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477            6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT   39 (60)
Q Consensus         6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~   39 (60)
                      |+|.+++.....++..++.+.+++.||.++.+..
T Consensus       123 ~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~~  156 (183)
T 2yxd_A          123 KINHIVANTIVLENAAKIINEFESRGYNVDAVNV  156 (183)
T ss_dssp             TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEecccccHHHHHHHHHHcCCeEEEEEe
Confidence            8999999988888889999999999999887654

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=93.59  E-value=0.09  Score=33.56  Aligned_cols=37  Identities=16%  Similarity=0.134  Sum_probs=31.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~   38 (60)
                      ++|+|+|.+++.-......+++.+.+++.||....+.
T Consensus       206 ~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~  242 (254)
T 2nxc_A          206 EALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA  242 (254)
T ss_dssp             HHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred             HHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence            4689999999987778889999999999999876543

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=92.50  E-value=0.17  Score=32.37  Aligned_cols=38  Identities=11%  Similarity=0.132  Sum_probs=30.2

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT   39 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~   39 (60)
                      +.|+|+|++++.....+..+++.+.+++.||....+.+
T Consensus       199 ~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~  236 (275)
T 1yb2_A          199 SMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVE  236 (275)
T ss_dssp             HTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEE
T ss_pred             HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEE
Confidence            46899999999887776778899999999998554433

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=92.48  E-value=0.15  Score=30.21  Aligned_cols=54  Identities=13%  Similarity=0.119  Sum_probs=32.3

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCce-EEEEE---EEeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM-GKTLL---TRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~-~~vv~---~rk~~~E~L~Vlr~~r~~   56 (60)
                      ++|+|+|++++......+..++.+.++.. |. .+++.   +|....|...|-+..+..
T Consensus       133 ~~LkpgG~lv~~~~~~~~~~~~~~~l~~~-f~~v~~~~~~~~~~~~~e~~~v~~g~~~~  190 (196)
T 2nyu_A          133 DILQPGGTFLCKTWAGSQSRRLQRRLTEE-FQNVRIIKPEASRKESSEVYFLATQYHGR  190 (196)
T ss_dssp             HHEEEEEEEEEEECCSGGGHHHHHHHHHH-EEEEEEECCC--------EEEEEEEECCC
T ss_pred             HHhcCCCEEEEEecCCccHHHHHHHHHHH-hcceEEECCcccCccCceEEEEeeecCCc
Confidence            47899999988877666677888877763 43 33322   455667877777766643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=92.39  E-value=0.22  Score=29.79  Aligned_cols=20  Identities=15%  Similarity=0.278  Sum_probs=16.4

Q ss_pred             CHHHHHHHHhhCCceEEEEE
Q psy477           19 DPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~vv~   38 (60)
                      .++++.+.+++.||.+++..
T Consensus       184 ~~~~~~~~l~~aGf~v~~~~  203 (218)
T 3ou2_A          184 SPAELTERLTALGWSCSVDE  203 (218)
T ss_dssp             CHHHHHHHHHHTTEEEEEEE
T ss_pred             CHHHHHHHHHHCCCEEEeee
Confidence            68999999999999965533

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=91.92  E-value=0.34  Score=29.15  Aligned_cols=21  Identities=10%  Similarity=0.184  Sum_probs=17.8

Q ss_pred             CHHHHHHHHhhCCceEEEEEE
Q psy477           19 DPEDIIHCLSQYGFMGKTLLT   39 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~vv~~   39 (60)
                      .++++.+.+++.||....+..
T Consensus       186 ~~~~l~~ll~~aGf~~~~~~~  206 (235)
T 3sm3_A          186 TEKELVFLLTDCRFEIDYFRV  206 (235)
T ss_dssp             CHHHHHHHHHTTTEEEEEEEE
T ss_pred             CHHHHHHHHHHcCCEEEEEEe
Confidence            689999999999999776554

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=91.90  E-value=0.29  Score=31.58  Aligned_cols=39  Identities=15%  Similarity=0.100  Sum_probs=30.7

Q ss_pred             ceecCCCeEEEEEecc------CCHHHHHHHHhhCCceEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKE------NDPEDIIHCLSQYGFMGKTLLTR   40 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~------N~p~ei~~~~~~~G~~~~vv~~r   40 (60)
                      +.|+|+|++++...+.      ...+++.+.+++.||.++++..|
T Consensus       213 ~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~  257 (278)
T 2frn_A          213 SIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNEL  257 (278)
T ss_dssp             HHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEeeeE
Confidence            4689999999887763      34678888889999999885543

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=91.76  E-value=0.93  Score=27.17  Aligned_cols=38  Identities=13%  Similarity=0.192  Sum_probs=29.9

Q ss_pred             ceecCCCeEEEEEeccC--------------CHHHHHHHHhhCC-ceEEEEEE
Q psy477            2 DSLSDKGILYLLVIKEN--------------DPEDIIHCLSQYG-FMGKTLLT   39 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N--------------~p~ei~~~~~~~G-~~~~vv~~   39 (60)
                      ++|+|+|.+++......              .++++.+.+++.| |....+..
T Consensus       129 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~  181 (211)
T 3e23_A          129 RALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVES  181 (211)
T ss_dssp             HHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEE
T ss_pred             HhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEe
Confidence            46899999988765543              6899999999999 99665544

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=91.74  E-value=1  Score=27.94  Aligned_cols=55  Identities=7%  Similarity=0.116  Sum_probs=32.9

Q ss_pred             ceecCCCeEEEEEeccC--CHHHHHHHHhhCCceEEEEEEEeeC--CeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKEN--DPEDIIHCLSQYGFMGKTLLTRQVP--GEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~~~G~~~~vv~~rk~~--~E~L~Vlr~~r~~   56 (60)
                      ++|+|+|.+++.-....  ..+++.+.+++.||....+..-..+  .+.-+++.+.+..
T Consensus       162 ~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~  220 (240)
T 1xdz_A          162 PLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIK  220 (240)
T ss_dssp             GGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred             HhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecC
Confidence            57999999987643322  1335667788899987655443333  2444555555543

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=91.62  E-value=0.22  Score=28.95  Aligned_cols=35  Identities=14%  Similarity=0.068  Sum_probs=29.4

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +.|+|+|.+++......+...+.+.+++.|+....
T Consensus       115 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (178)
T 3hm2_A          115 KRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS  149 (178)
T ss_dssp             HTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred             HhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence            46899999998888888888899999998877553

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=90.66  E-value=0.23  Score=28.92  Aligned_cols=36  Identities=11%  Similarity=0.039  Sum_probs=28.8

Q ss_pred             ceecCCCeEEEEEeccC--CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN--DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N--~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++......  .++++.+.+++.||....+
T Consensus       135 ~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~  172 (195)
T 3cgg_A          135 RALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA  172 (195)
T ss_dssp             HHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred             HHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence            46889999988776554  5889999999999986644

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=90.61  E-value=1.1  Score=28.67  Aligned_cols=39  Identities=8%  Similarity=-0.018  Sum_probs=28.7

Q ss_pred             ceecCCCeEEEEEecc-----------CCHHHHHHHHhhCCceEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKE-----------NDPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~-----------N~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      ++|+|+|+++++....           -.|+++.+.+.. +|+...+.+..
T Consensus       179 ~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~~~~  228 (252)
T 2gb4_A          179 SLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLEEVD  228 (252)
T ss_dssp             HTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEEEEE
T ss_pred             HHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEeccc
Confidence            5799999998876542           247899998887 68877665543

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=90.53  E-value=0.16  Score=31.02  Aligned_cols=35  Identities=20%  Similarity=0.163  Sum_probs=25.7

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      ++|+|+|.+++..-..+..+++.+.+.+.||....
T Consensus       144 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~  178 (214)
T 1yzh_A          144 RILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG  178 (214)
T ss_dssp             HHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence            46899999888653333457778888888988654

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=90.52  E-value=0.13  Score=31.69  Aligned_cols=51  Identities=12%  Similarity=0.053  Sum_probs=34.1

Q ss_pred             ceecCCCeEEEEEec---------------cCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477            2 DSLSDKGILYLLVIK---------------ENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF   52 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~---------------~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~   52 (60)
                      ++|+|+|.+++..-.               .-.++++.+.+++.||....+.......+.++.+++
T Consensus       185 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~  250 (254)
T 1xtp_A          185 QALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQEEWPTDLFPLKM  250 (254)
T ss_dssp             HHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECTTCCTTSCCEEE
T ss_pred             HhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeecCCCCchhheEEE
Confidence            468999998887621               114689999999999997665554444444444443

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=90.46  E-value=0.84  Score=26.37  Aligned_cols=50  Identities=18%  Similarity=0.211  Sum_probs=32.4

Q ss_pred             ceecCCCeEEEEEeccC------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKEN------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r~~   56 (60)
                      +.|+|+|.+++......            .++++.+.++  ||....  .... .+..+.+=+++.+
T Consensus       100 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~--~~~~-~~~~~~l~~~~~~  161 (170)
T 3i9f_A          100 RILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEK--RFNP-TPYHFGLVLKRKT  161 (170)
T ss_dssp             HHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEE--EECS-STTEEEEEEEECC
T ss_pred             HhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEE--ccCC-CCceEEEEEecCC
Confidence            46899999988865443            3678888887  987543  2333 4445566666544

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=90.06  E-value=0.55  Score=28.00  Aligned_cols=23  Identities=17%  Similarity=0.127  Sum_probs=18.8

Q ss_pred             CHHHHHHHHhhCCceEEEEEEEe
Q psy477           19 DPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      .++++.+.+++.||...-+....
T Consensus       188 ~~~~~~~~l~~aGf~~~~~~~~~  210 (227)
T 3e8s_A          188 TLASWLNALDMAGLRLVSLQEPQ  210 (227)
T ss_dssp             CHHHHHHHHHHTTEEEEEEECCC
T ss_pred             cHHHHHHHHHHcCCeEEEEecCC
Confidence            68999999999999987665533

>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*

Probab=89.99  E-value=1.8  Score=26.54  Aligned_cols=38  Identities=13%  Similarity=0.151  Sum_probs=28.7

Q ss_pred             ceecCCCeEEEEEecc---------------CCHHHHHHHHhhCCceEEEEEE
Q psy477            2 DSLSDKGILYLLVIKE---------------NDPEDIIHCLSQYGFMGKTLLT   39 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~---------------N~p~ei~~~~~~~G~~~~vv~~   39 (60)
                      ++|+|+|.+++.....               -+++++.+.+.+.||....+..
T Consensus       186 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~  238 (265)
T 2i62_A          186 SLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEV  238 (265)
T ss_dssp             TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred             hhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEE
Confidence            5789999988865321               2577999999999998765554

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=89.66  E-value=0.73  Score=29.34  Aligned_cols=53  Identities=15%  Similarity=0.155  Sum_probs=35.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEE---EeeCCeEEEEEEEEeCC
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLT---RQVPGEKLSVLKFTRSC   56 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~---rk~~~E~L~Vlr~~r~~   56 (60)
                      ++|+|+|.++++.-.. ...++.+.+++. |....+..   +.-..-.++++.+.+..
T Consensus       158 ~~LkpgG~l~~~~~~~-~~~~~~~~l~~~-~~~~~i~~v~~~~~~~~~~~lv~~~k~~  213 (260)
T 2ozv_A          158 AIMVSGGQLSLISRPQ-SVAEIIAACGSR-FGGLEITLIHPRPGEDAVRMLVTAIKGS  213 (260)
T ss_dssp             HHEEEEEEEEEEECGG-GHHHHHHHHTTT-EEEEEEEEEESSTTSCCCEEEEEEEETC
T ss_pred             HHcCCCCEEEEEEcHH-HHHHHHHHHHhc-CCceEEEEEcCCCCCCceEEEEEEEeCC
Confidence            4689999999987655 567788888875 76443333   22223357788888754

>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41

Probab=89.54  E-value=1.4  Score=26.70  Aligned_cols=39  Identities=15%  Similarity=0.343  Sum_probs=29.2

Q ss_pred             ceecCCCeEEEEEeccC-----------------------CHHHHHHHHhhCCceEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKEN-----------------------DPEDIIHCLSQYGFMGKTLLTR   40 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N-----------------------~p~ei~~~~~~~G~~~~vv~~r   40 (60)
                      +.|+|+|.+++.....+                       .++++.+.+++.||....+...
T Consensus       127 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~  188 (219)
T 1vlm_A          127 RILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT  188 (219)
T ss_dssp             HHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred             HHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence            46889999988765432                       4688899999999987655443

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=89.41  E-value=0.22  Score=30.76  Aligned_cols=35  Identities=9%  Similarity=0.035  Sum_probs=28.7

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +.|+|+|.++++....+...++.+.+++.||....
T Consensus       186 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~  220 (258)
T 2pwy_A          186 LALKPDRFLVAYLPNITQVLELVRAAEAHPFRLER  220 (258)
T ss_dssp             HHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEE
T ss_pred             HhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEE
Confidence            46899999998887776788899999999998543

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=89.24  E-value=1.6  Score=26.05  Aligned_cols=36  Identities=11%  Similarity=0.016  Sum_probs=27.8

Q ss_pred             ceecCCCeEEEEEeccC------------CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN------------DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N------------~p~ei~~~~~~~G~~~~vv   37 (60)
                      +.|+|+|.+++......            .++++.+.+++.||+...+
T Consensus       131 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~  178 (219)
T 3dh0_A          131 RVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV  178 (219)
T ss_dssp             HHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence            46899999988764332            4799999999999985543

>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...

Probab=89.23  E-value=2.8  Score=26.50  Aligned_cols=40  Identities=23%  Similarity=0.227  Sum_probs=29.7

Q ss_pred             ceecCCCeEEEEEec---------------cCCHHHHHHHHhhCCceEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIK---------------ENDPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~---------------~N~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      ++|+|+|.+++...-               .-.++++.+.+++.||....+....
T Consensus       203 r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~  257 (289)
T 2g72_A          203 TLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI  257 (289)
T ss_dssp             TTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             HhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence            579999998886321               1258999999999999876655544

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=89.08  E-value=0.22  Score=30.78  Aligned_cols=34  Identities=15%  Similarity=0.226  Sum_probs=25.7

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK   35 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~   35 (60)
                      ++|+|+|.+++..-..+-.+.+.+.+.+.||...
T Consensus       141 ~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~  174 (213)
T 2fca_A          141 EVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT  174 (213)
T ss_dssp             HHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred             HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence            4689999998876444446778888888898643

>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}

Probab=89.01  E-value=0.33  Score=31.29  Aligned_cols=36  Identities=8%  Similarity=0.201  Sum_probs=27.1

Q ss_pred             eec---C--CCeEEEEEeccCC-----HHHHHHHHhhCC-ceEEEEE
Q psy477            3 SLS---D--KGILYLLVIKEND-----PEDIIHCLSQYG-FMGKTLL   38 (60)
Q Consensus         3 ~Ls---~--~G~~YLv~~~~N~-----p~ei~~~~~~~G-~~~~vv~   38 (60)
                      +|+   |  +|++|++.+..+.     ..++.+.+++.| |.++.+.
T Consensus       189 ~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~~  235 (281)
T 3bzb_A          189 LLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPWL  235 (281)
T ss_dssp             HBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEEE
T ss_pred             HhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEec
Confidence            566   8  9999998877542     467888889999 9998774

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=88.98  E-value=0.3  Score=30.24  Aligned_cols=22  Identities=18%  Similarity=0.276  Sum_probs=18.3

Q ss_pred             CHHHHHHHHhhCCceEEEEEEE
Q psy477           19 DPEDIIHCLSQYGFMGKTLLTR   40 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~vv~~r   40 (60)
                      .++++.+.+++.||....+.+-
T Consensus       195 t~~~~~~~l~~aGF~~~~~~e~  216 (253)
T 3g5l_A          195 TVTTYIQTLLKNGFQINSVIEP  216 (253)
T ss_dssp             CHHHHHHHHHHTTEEEEEEECC
T ss_pred             CHHHHHHHHHHcCCeeeeeecC
Confidence            6799999999999998766543

>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}

Probab=88.84  E-value=0.66  Score=30.49  Aligned_cols=43  Identities=9%  Similarity=-0.006  Sum_probs=33.7

Q ss_pred             eEEEEEeccCCHHHHHHHHhhCCceE---EEEEEEeeCCeEEEEEE
Q psy477            9 ILYLLVIKENDPEDIIHCLSQYGFMG---KTLLTRQVPGEKLSVLK   51 (60)
Q Consensus         9 ~~YLv~~~~N~p~ei~~~~~~~G~~~---~vv~~rk~~~E~L~Vlr   51 (60)
                      ..++|++...+.+.+.+.|.+.||..   .+|.+..-+.|-|.+-+
T Consensus       118 ~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~  163 (244)
T 3gnl_A          118 VTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAP  163 (244)
T ss_dssp             CCEEEEEESSCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCEEEEEcCCChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEe
Confidence            46788889899999999999999997   56666666666666543

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=88.75  E-value=0.2  Score=29.17  Aligned_cols=36  Identities=11%  Similarity=0.227  Sum_probs=28.5

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++.........++.+.|++.....+++
T Consensus       145 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~  180 (194)
T 1dus_A          145 ELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETV  180 (194)
T ss_dssp             HHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEE
T ss_pred             HHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEE
Confidence            468999999999988888888999988874355543

>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46

Probab=88.58  E-value=0.46  Score=29.00  Aligned_cols=44  Identities=11%  Similarity=0.109  Sum_probs=32.0

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF   52 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~   52 (60)
                      ++|+|+|++++.....+...+.     ..+|.  ++..++++.+++.+++.
T Consensus       148 ~~L~pgG~l~i~~~~~~~~~~~-----~~~~~--~~~~~~~g~~~~~~~~~  191 (202)
T 2fpo_A          148 GWLADEALIYVESEVENGLPTV-----PANWS--LHREKVAGQVAYRLYQR  191 (202)
T ss_dssp             TCEEEEEEEEEEEEGGGCSCCC-----CTTEE--EEEEEEETTEEEEEEEE
T ss_pred             CccCCCcEEEEEECCCcccccc-----CCcce--EEeeeccCCEEEEEEEE
Confidence            4699999999888776654321     23554  66788999999998864

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=88.51  E-value=1.9  Score=25.78  Aligned_cols=51  Identities=12%  Similarity=0.066  Sum_probs=33.4

Q ss_pred             ceecCCCeEEEEEeccC------------------------------CHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEE
Q psy477            2 DSLSDKGILYLLVIKEN------------------------------DPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLK   51 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N------------------------------~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr   51 (60)
                      ++|+|+|.+++......                              .++++.+.+++.||+...   ... .....++.
T Consensus       133 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~---~~~-~~~~w~~~  208 (220)
T 3hnr_A          133 QLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF---TRL-NHFVWVME  208 (220)
T ss_dssp             HHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE---EEC-SSSEEEEE
T ss_pred             HhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE---eec-cceEEEEe
Confidence            46899999988753322                              357888999999997443   222 24556666


Q ss_pred             EEeCC
Q psy477           52 FTRSC   56 (60)
Q Consensus        52 ~~r~~   56 (60)
                      ..+++
T Consensus       209 ~~~~~  213 (220)
T 3hnr_A          209 ATKQL  213 (220)
T ss_dssp             EEECS
T ss_pred             ehhhh
Confidence            55544

>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A

Probab=88.31  E-value=0.89  Score=27.38  Aligned_cols=36  Identities=22%  Similarity=0.255  Sum_probs=27.6

Q ss_pred             ceecCCCeEEEEEeccC--------------------------------CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN--------------------------------DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N--------------------------------~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++......                                .++++.+.+++.||....+
T Consensus       129 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~  196 (250)
T 2p7i_A          129 DWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR  196 (250)
T ss_dssp             TTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence            57899999988774322                                5778899999999986644

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=87.19  E-value=0.28  Score=31.17  Aligned_cols=35  Identities=14%  Similarity=0.256  Sum_probs=28.9

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +.|+|+|++++.....+..+++.+.|++.||....
T Consensus       201 ~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~  235 (277)
T 1o54_A          201 EALKGGGRFATVCPTTNQVQETLKKLQELPFIRIE  235 (277)
T ss_dssp             HHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEE
T ss_pred             HHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeE
Confidence            46899999999887777788999999999997443

>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*

Probab=86.91  E-value=0.48  Score=30.15  Aligned_cols=47  Identities=15%  Similarity=0.176  Sum_probs=32.2

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSV   49 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~V   49 (60)
                      ++|+|+|.+++. .....++++.+.+++.||....+..--.+.+...+
T Consensus       226 ~~LkpgG~l~~~-~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~  272 (276)
T 2b3t_A          226 NALVSGGFLLLE-HGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTL  272 (276)
T ss_dssp             GGEEEEEEEEEE-CCSSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEE
T ss_pred             HhcCCCCEEEEE-ECchHHHHHHHHHHHCCCcEEEEEecCCCCCcEEE
Confidence            478999997765 44556899999999999974333333444555444

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=86.52  E-value=0.99  Score=27.82  Aligned_cols=36  Identities=19%  Similarity=0.040  Sum_probs=23.1

Q ss_pred             ceecCCCeEEEEEec-cCC---------HHHHHHHHhhCCceEEEEE
Q psy477            2 DSLSDKGILYLLVIK-END---------PEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~-~N~---------p~ei~~~~~~~G~~~~vv~   38 (60)
                      +.|+|+|.++++.-. .++         ++++. .+.+.||....+.
T Consensus       166 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~  211 (230)
T 1fbn_A          166 WFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV  211 (230)
T ss_dssp             HHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred             HhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence            468999999998432 111         14555 7788899755433

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=86.21  E-value=1.6  Score=24.50  Aligned_cols=31  Identities=16%  Similarity=0.313  Sum_probs=25.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCce
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFM   33 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~   33 (60)
                      ++|+|+|.+++.........++.+.+++. |.
T Consensus       124 ~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~  154 (180)
T 1ej0_A          124 DVLAPGGSFVVKVFQGEGFDEYLREIRSL-FT  154 (180)
T ss_dssp             HHEEEEEEEEEEEESSTTHHHHHHHHHHH-EE
T ss_pred             HHcCCCcEEEEEEecCCcHHHHHHHHHHh-hh
Confidence            46899999999888888888888888874 54

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=85.96  E-value=1.2  Score=27.29  Aligned_cols=35  Identities=17%  Similarity=0.174  Sum_probs=27.2

Q ss_pred             ceecCCCeEEEEEeccC---------------------CHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKEN---------------------DPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~~~~~~~G~~~~v   36 (60)
                      ++|+|+|.+++......                     .++++.+.+++.||....
T Consensus       147 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~  202 (266)
T 3ujc_A          147 KWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV  202 (266)
T ss_dssp             HHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred             HHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence            46899999988865333                     478899999999998654

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=85.66  E-value=1.3  Score=27.90  Aligned_cols=40  Identities=20%  Similarity=0.286  Sum_probs=29.3

Q ss_pred             ceecCCCeEEEEEecc---------------------------------CCHHHHHHHHhhCCceEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKE---------------------------------NDPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~---------------------------------N~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      ++|+|+|++++.....                                 -.++++.+.+++.||...-+..-+
T Consensus       161 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~  233 (285)
T 4htf_A          161 SVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR  233 (285)
T ss_dssp             HTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred             HHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence            4689999998877421                                 236899999999999976554433

>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46

Probab=85.31  E-value=1.8  Score=26.22  Aligned_cols=43  Identities=12%  Similarity=0.144  Sum_probs=30.1

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKF   52 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~   52 (60)
                      ++|+|+|++++.....+ ..+     ...+|.  ++.+|+++...+.+++.
T Consensus       151 ~~LkpgG~l~i~~~~~~-~~~-----~~~~~~--~~~~~~yG~~~~~~~~~  193 (201)
T 2ift_A          151 NWLKPNALIYVETEKDK-PLI-----TPENWT--LLKEKTTGIVSYRLYQN  193 (201)
T ss_dssp             TCEEEEEEEEEEEESSS-CCC-----CCTTEE--EEEEEEETTEEEEEEEE
T ss_pred             CccCCCcEEEEEECCCC-Ccc-----ccchhH--HHHHHhcCCEEEEEEec
Confidence            46999999988876665 111     113554  56789999998888764

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=84.97  E-value=0.24  Score=30.76  Aligned_cols=33  Identities=18%  Similarity=0.249  Sum_probs=27.9

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCC--ceE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYG--FMG   34 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G--~~~   34 (60)
                      +.|+|+|.+++.....+..+++.+.+++.|  |..
T Consensus       182 ~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~  216 (255)
T 3mb5_A          182 KALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMK  216 (255)
T ss_dssp             HHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSC
T ss_pred             HHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence            468999999888877777889999999999  753

>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*

Probab=84.83  E-value=3  Score=26.49  Aligned_cols=21  Identities=19%  Similarity=0.324  Sum_probs=17.1

Q ss_pred             CHHHHHHHHhhCCceEEEEEE
Q psy477           19 DPEDIIHCLSQYGFMGKTLLT   39 (60)
Q Consensus        19 ~p~ei~~~~~~~G~~~~vv~~   39 (60)
                      .++++.+.+++.||...-+..
T Consensus       253 t~~el~~ll~~aGF~v~~~~~  273 (299)
T 3g2m_A          253 APDQVVRELVRSGFDVIAQTP  273 (299)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEE
T ss_pred             CHHHHHHHHHHCCCEEEEEEe
Confidence            688999999999998765544

>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A

Probab=84.81  E-value=2.1  Score=24.96  Aligned_cols=33  Identities=21%  Similarity=0.262  Sum_probs=24.5

Q ss_pred             ceecCCCeEEEEEeccC---------CHHHHHHHHhhCCceEE
Q psy477            2 DSLSDKGILYLLVIKEN---------DPEDIIHCLSQYGFMGK   35 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------~p~ei~~~~~~~G~~~~   35 (60)
                      ++|+|+|.+++.--...         .++++.+.+++.|| .+
T Consensus        89 r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~  130 (176)
T 2ld4_A           89 RILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE  130 (176)
T ss_dssp             HHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred             HHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence            57899999888422111         27899999999999 66

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=84.39  E-value=1.6  Score=26.44  Aligned_cols=36  Identities=14%  Similarity=0.163  Sum_probs=27.5

Q ss_pred             ceecCCCeEEEEEecc---------------------CCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKE---------------------NDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~---------------------N~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++.....                     -.|+++.+.+++.||....+
T Consensus       141 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~  197 (242)
T 3l8d_A          141 RVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG  197 (242)
T ss_dssp             HHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred             HHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence            4689999998887432                     34678999999999986543

>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20

Probab=84.33  E-value=0.91  Score=27.05  Aligned_cols=32  Identities=13%  Similarity=0.159  Sum_probs=21.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +.|+|+|.+++.... +..+++.+.+.  ||....
T Consensus       153 ~~L~~gG~l~~~~~~-~~~~~~~~~~~--g~~~~~  184 (207)
T 1jsx_A          153 HLPGEQGRFYALKGQ-MPEDEIALLPE--EYQVES  184 (207)
T ss_dssp             TSEEEEEEEEEEESS-CCHHHHHTSCT--TEEEEE
T ss_pred             HhcCCCcEEEEEeCC-CchHHHHHHhc--CCceee
Confidence            578999998876443 45666666554  887543

>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*

Probab=84.33  E-value=2.8  Score=26.99  Aligned_cols=32  Identities=22%  Similarity=0.278  Sum_probs=25.3

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK   35 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~   35 (60)
                      +.|.++|+  +|++..++.+.+.+.|.++||...
T Consensus       107 ~~L~~~~~--lVlq~~~~~~~vr~~L~~~Gf~i~  138 (225)
T 3kr9_A          107 GKLANVER--LILQPNNREDDLRIWLQDHGFQIV  138 (225)
T ss_dssp             GGCTTCCE--EEEEESSCHHHHHHHHHHTTEEEE
T ss_pred             HHhCCCCE--EEEECCCCHHHHHHHHHHCCCEEE
Confidence            35666654  666777899999999999999854

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=83.81  E-value=1.6  Score=25.32  Aligned_cols=46  Identities=11%  Similarity=-0.108  Sum_probs=32.2

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEeeCCeEEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQVPGEKLSVLKFTR   54 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L~Vlr~~r   54 (60)
                      +.|+|+|++++.........+     ...+|.  ...+|+++...+.++++..
T Consensus       126 ~~L~~gG~l~~~~~~~~~~~~-----~~~~~~--~~~~~~yg~~~~~~~~~~~  171 (177)
T 2esr_A          126 NLLSEQVMVVCETDKTVLLPK-----EIATLG--IWKEKIYGISKVTVYVNEG  171 (177)
T ss_dssp             TCEEEEEEEEEEEETTCCCCS-----EETTEE--EEEEEEETTEEEEEEEETT
T ss_pred             CCcCCCcEEEEEECCcccccc-----ccCceE--EEEeeecCcEEEEEEEecc
Confidence            678999999888776654332     223554  4567889998888887643

>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}

Probab=83.59  E-value=3.1  Score=26.92  Aligned_cols=31  Identities=19%  Similarity=0.204  Sum_probs=25.6

Q ss_pred             eecCCCeEEEEEeccCCHHHHHHHHhhCCceEE
Q psy477            3 SLSDKGILYLLVIKENDPEDIIHCLSQYGFMGK   35 (60)
Q Consensus         3 ~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~   35 (60)
                      .|.+.|  ++|++..++.+.+.+.|.+.||...
T Consensus       114 ~l~~~~--~lIlqp~~~~~~lr~~L~~~Gf~i~  144 (230)
T 3lec_A          114 KLQHVK--TLVLQPNNREDDLRKWLAANDFEIV  144 (230)
T ss_dssp             GGTTCC--EEEEEESSCHHHHHHHHHHTTEEEE
T ss_pred             HhCcCC--EEEEECCCChHHHHHHHHHCCCEEE
Confidence            455555  7888888999999999999999854

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=83.03  E-value=2.9  Score=26.17  Aligned_cols=36  Identities=22%  Similarity=0.329  Sum_probs=26.9

Q ss_pred             ceecCCCeEEEEEeccC----------------------------------CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN----------------------------------DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N----------------------------------~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++......                                  .++++.+.+++.||....+
T Consensus       156 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~  225 (287)
T 1kpg_A          156 RLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRV  225 (287)
T ss_dssp             HHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEE
T ss_pred             HhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence            46899999988765432                                  4677888888899986544

>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A

Probab=82.47  E-value=1.8  Score=25.99  Aligned_cols=36  Identities=14%  Similarity=0.213  Sum_probs=24.1

Q ss_pred             ceecCCCeEEEEEeccC---------------------CHHHHH----HHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN---------------------DPEDII----HCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~----~~~~~~G~~~~vv   37 (60)
                      +.|+|+|+++.......                     .++++.    +.+++.||.++..
T Consensus       129 ~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~  189 (219)
T 3jwg_A          129 EFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFL  189 (219)
T ss_dssp             TTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEE
T ss_pred             HhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEE
Confidence            46899996554443322                     567777    6677789988764

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=82.45  E-value=2.5  Score=26.86  Aligned_cols=36  Identities=19%  Similarity=0.177  Sum_probs=26.8

Q ss_pred             ceecCCCeEEEEEeccCC----------------------------------HHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEND----------------------------------PEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~----------------------------------p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++......+                                  ++++.+.+++.||....+
T Consensus       171 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~  240 (302)
T 3hem_A          171 NLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERY  240 (302)
T ss_dssp             HSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred             HhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEE
Confidence            479999999998875443                                  446777788888876544

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=82.20  E-value=2.7  Score=26.65  Aligned_cols=53  Identities=15%  Similarity=0.094  Sum_probs=30.5

Q ss_pred             ceecCCCeEEEEEecc--CCHHHHHHHHhhCCceEEEEEEEeeCC--eEEEEEEEEe
Q psy477            2 DSLSDKGILYLLVIKE--NDPEDIIHCLSQYGFMGKTLLTRQVPG--EKLSVLKFTR   54 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~--N~p~ei~~~~~~~G~~~~vv~~rk~~~--E~L~Vlr~~r   54 (60)
                      ++|+|+|+++++.-..  ...+++.+.+.+.||...-+..-..++  +.=+++-+.+
T Consensus       172 ~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k  228 (249)
T 3g89_A          172 PFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK  228 (249)
T ss_dssp             GGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred             HHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence            5789999987655321  113344566677899877665544443  3334444444

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=81.54  E-value=2.4  Score=25.98  Aligned_cols=35  Identities=11%  Similarity=0.122  Sum_probs=26.3

Q ss_pred             ceecCCCeEEEEEec--------------------cCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIK--------------------ENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~--------------------~N~p~ei~~~~~~~G~~~~v   36 (60)
                      ++|+|+|.+++....                    ...++++.+.+++.||....
T Consensus       138 ~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~  192 (257)
T 3f4k_A          138 KYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA  192 (257)
T ss_dssp             TTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred             HHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence            578999999888643                    12467888899999998654

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=81.46  E-value=3.4  Score=20.24  Aligned_cols=29  Identities=10%  Similarity=0.208  Sum_probs=21.3

Q ss_pred             CeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            8 GILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +...+......+++++.+.+++.||.+++
T Consensus        40 ~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~   68 (69)
T 4a4j_A           40 EQAVVSYHGETTPQILTDAVERAGYHARV   68 (69)
T ss_dssp             TEEEEEECTTCCHHHHHHHHHHTTCEEEE
T ss_pred             CEEEEEECCCCCHHHHHHHHHHcCCceEe
Confidence            44433333556799999999999999875

>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A

Probab=81.14  E-value=1.6  Score=26.30  Aligned_cols=36  Identities=6%  Similarity=-0.028  Sum_probs=24.3

Q ss_pred             ceecCCCeEEEEEeccC---------------------CHHHHH----HHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN---------------------DPEDII----HCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------------~p~ei~----~~~~~~G~~~~vv   37 (60)
                      ++|+|+|+++.......                     .++++.    +.+++.||.++..
T Consensus       129 ~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~  189 (217)
T 3jwh_A          129 EFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQ  189 (217)
T ss_dssp             TTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred             HHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceEEEE
Confidence            46899996555543321                     567777    7777889987754

>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32

Probab=80.80  E-value=2.3  Score=25.28  Aligned_cols=40  Identities=18%  Similarity=0.139  Sum_probs=27.8

Q ss_pred             CeEEEEEe-ccCCHHHHHHHHhhCCceEEEEEEEeeCCeEE
Q psy477            8 GILYLLVI-KENDPEDIIHCLSQYGFMGKTLLTRQVPGEKL   47 (60)
Q Consensus         8 G~~YLv~~-~~N~p~ei~~~~~~~G~~~~vv~~rk~~~E~L   47 (60)
                      |.+|++.. ..+..+.+.+.+.+.||..+++....++.++.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~  182 (207)
T 1wy7_A          142 DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHRLTTKIEIPLQ  182 (207)
T ss_dssp             SEEEEEEECCHHHHHHHHHHHHHTTEEEEEEEEEEEEEC--
T ss_pred             CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEEEEEecCCccc
Confidence            66776653 44446777888899999999888877664443

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=80.46  E-value=2.4  Score=27.27  Aligned_cols=36  Identities=11%  Similarity=0.095  Sum_probs=26.8

Q ss_pred             ceecCCCeEEEEEeccC----------------------CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN----------------------DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N----------------------~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|+|+|.+++.....+                      .++++.+.+++.||....+
T Consensus       209 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~  266 (312)
T 3vc1_A          209 RFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTI  266 (312)
T ss_dssp             HHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEE
T ss_pred             HHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEE
Confidence            47899999988764333                      3678888999999986543

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=80.41  E-value=2.3  Score=26.01  Aligned_cols=49  Identities=14%  Similarity=0.193  Sum_probs=28.1

Q ss_pred             ceecCCCeEEEEEeccC-----CHHHH----HHHHhhCCceEEEEEE-EeeCCeEEEEE
Q psy477            2 DSLSDKGILYLLVIKEN-----DPEDI----IHCLSQYGFMGKTLLT-RQVPGEKLSVL   50 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N-----~p~ei----~~~~~~~G~~~~vv~~-rk~~~E~L~Vl   50 (60)
                      +.|+|+|.+++.+-..+     .+..+    ++.|++.||....+.. ......+..|+
T Consensus       170 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~  228 (233)
T 2ipx_A          170 TFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVV  228 (233)
T ss_dssp             HHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEE
T ss_pred             HHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEE
Confidence            46899999999544321     12222    5777888998654333 22334444444

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=80.06  E-value=3.3  Score=25.32  Aligned_cols=35  Identities=14%  Similarity=0.225  Sum_probs=26.3

Q ss_pred             ceecCCCeEEEEEeccC------------------CHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKEN------------------DPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N------------------~p~ei~~~~~~~G~~~~v   36 (60)
                      ++|+|+|.+++......                  .++++.+.+++.||....
T Consensus       128 ~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~  180 (240)
T 3dli_A          128 SKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVK  180 (240)
T ss_dssp             HHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEE
T ss_pred             HHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEE
Confidence            47899999988776433                  357788888889998543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	60
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.93
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	92.77
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	90.61
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	90.34
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	87.62
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	86.89
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	85.33
d1clia2	175	Aminoimidazole ribonucleotide synthetase (PurM) C-	83.47
d2f06a2	70	Hypothetical protein BT0572 {Bacteroides thetaiota	80.54
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	80.1
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	80.02

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.93  E-value=0.021  Score=33.72  Aligned_cols=39  Identities=10%  Similarity=0.216  Sum_probs=28.8

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTLLTR   40 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~r   40 (60)
                      +.|+|+|.+|++.......+.+.+.+++....++.+.+.
T Consensus       145 ~~LkpgG~l~i~~~~~~~~~~~~~~l~~~f~~~~~~~~~  183 (194)
T d1dusa_         145 ELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIK  183 (194)
T ss_dssp             HHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEE
T ss_pred             HhcCcCcEEEEEEeCcCCHHHHHHHHHHhCCcEEEEEec
Confidence            578999999998887777777777777755556655443

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.26  Score=29.04  Aligned_cols=36  Identities=19%  Similarity=0.181  Sum_probs=27.9

Q ss_pred             ceecCCCeEEEEEeccC---------------CHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKEN---------------DPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N---------------~p~ei~~~~~~~G~~~~vv   37 (60)
                      ++|.|+|.+.+......               .++++.+.+++.||.+.-+
T Consensus       181 ~~LkpGG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~  231 (257)
T d2a14a1         181 SLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQL  231 (257)
T ss_dssp             TTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred             hccCCCcEEEEEEecccccceeccccccccCCCHHHHHHHHHHCCCEEEEE
Confidence            57899998877654432               4899999999999986544

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.61  E-value=0.071  Score=31.11  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=29.6

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      +.|+|+|++.+.....++..++.+.+++.||..+++
T Consensus       122 ~~LkpgG~lvi~~~~~e~~~~~~~~l~~~~~~~~~~  157 (186)
T d1l3ia_         122 DKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT  157 (186)
T ss_dssp             HTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred             HHhCcCCEEEEEeeccccHHHHHHHHHHcCCCeEEE
Confidence            468999998887777777888899999999977754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=90.34  E-value=0.17  Score=31.62  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=27.3

Q ss_pred             ceecCCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            2 DSLSDKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      +.|+|+|++++-=+-..+.++|.+.+++.||...-
T Consensus       206 ~~LkpGG~lilSgil~~~~~~v~~~~~~~Gf~~~~  240 (254)
T d2nxca1         206 EALVPGGRALLTGILKDRAPLVREAMAGAGFRPLE  240 (254)
T ss_dssp             HHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEE
T ss_pred             HhcCCCcEEEEEecchhhHHHHHHHHHHCCCEEEE
Confidence            46899999877433455789999999999998543

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=87.62  E-value=0.51  Score=23.68  Aligned_cols=24  Identities=17%  Similarity=0.116  Sum_probs=20.6

Q ss_pred             eccCCHHHHHHHHhhCCceEEEEE
Q psy477           15 IKENDPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus        15 ~~~N~p~ei~~~~~~~G~~~~vv~   38 (60)
                      ...-+|++|++.+++.||.++.++
T Consensus        42 ~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_          42 ESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             EeeCCHHHHHHHHHHhCCeEEEee
Confidence            455689999999999999999764

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.89  E-value=0.56  Score=23.63  Aligned_cols=31  Identities=16%  Similarity=0.149  Sum_probs=24.6

Q ss_pred             CCeEEEEEeccCCHHHHHHHHhhCCceEEEE
Q psy477            7 KGILYLLVIKENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         7 ~G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      .|.+.+..-...++++|.+.+++.||.++++
T Consensus        39 ~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~   69 (72)
T d2ggpb1          39 TNECQVTYDNEVTADSIKEIIEDCGFDCEIL   69 (72)
T ss_dssp             TCEEEEEECSSCCHHHHHHHHHHTTCCCEEE
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHhCCCeEEc
Confidence            4566666555668999999999999999875

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=85.33  E-value=0.74  Score=22.88  Aligned_cols=31  Identities=10%  Similarity=0.231  Sum_probs=22.2

Q ss_pred             CCeEEEEEe-ccCCHHHHHHHHhhCCceEEEE
Q psy477            7 KGILYLLVI-KENDPEDIIHCLSQYGFMGKTL   37 (60)
Q Consensus         7 ~G~~YLv~~-~~N~p~ei~~~~~~~G~~~~vv   37 (60)
                      .|.+-+..- +..++++|.+.+++.||.++++
T Consensus        37 ~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_          37 KEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             TTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            344444432 2347999999999999999874

>d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: PurM C-terminal domain-like
superfamily: PurM C-terminal domain-like
family: PurM C-terminal domain-like
domain: Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.47  E-value=1.3  Score=26.31  Aligned_cols=34  Identities=9%  Similarity=0.136  Sum_probs=30.5

Q ss_pred             CeEEEEEeccCCHHHHHHHHhhCCceEEEEEEEe
Q psy477            8 GILYLLVIKENDPEDIIHCLSQYGFMGKTLLTRQ   41 (60)
Q Consensus         8 G~~YLv~~~~N~p~ei~~~~~~~G~~~~vv~~rk   41 (60)
                      |+-++++++.++-+++++.+++.|+.+.++.+-.
T Consensus       131 GIGmvliV~~~~~~~v~~~l~~~g~~a~~IG~V~  164 (175)
T d1clia2         131 GVGMIIALPAPEVDKALALLNANGENAWKIGIIK  164 (175)
T ss_dssp             TEEEEEEECGGGHHHHHHHHHTTTCCEEEEEEEE
T ss_pred             cceEEEEECHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence            7888999999999999999999999999888743

>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: ACT-like
family: BT0572-like
domain: Hypothetical protein BT0572
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=80.54  E-value=1.5  Score=22.33  Aligned_cols=28  Identities=32%  Similarity=0.446  Sum_probs=22.0

Q ss_pred             CCCeEEEEEeccCCHHHHHHHHhhCCceEEE
Q psy477            6 DKGILYLLVIKENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         6 ~~G~~YLv~~~~N~p~ei~~~~~~~G~~~~v   36 (60)
                      ..|+.-+++   ++|++..+.++++||.+.+
T Consensus        41 ~~~i~Riiv---~~~e~a~~~L~~~g~~v~~   68 (70)
T d2f06a2          41 DFGILRGIV---SDPDKAYKALKDNHFAVNI   68 (70)
T ss_dssp             SCEEEEEEE---SCHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEEE---CChHHHHHHHHHCCCEEec
Confidence            356666654   6899999999999998764

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.10  E-value=4.2  Score=24.28  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=26.9

Q ss_pred             ceecCCCeEEEEEecc---------------CCHHHHHHHHhhCCceEEEEE
Q psy477            2 DSLSDKGILYLLVIKE---------------NDPEDIIHCLSQYGFMGKTLL   38 (60)
Q Consensus         2 ~~Ls~~G~~YLv~~~~---------------N~p~ei~~~~~~~G~~~~vv~   38 (60)
                      ++|.|||.+.+.-.-.               =.++++.+.+.+.||....+.
T Consensus       186 ~~LkPGG~li~~~~~~~~~~~~~~~~~~~~~~t~e~v~~~l~~aGf~v~~~~  237 (263)
T d2g72a1         186 TLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLR  237 (263)
T ss_dssp             TTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred             HHcCCCCEEEEecccCCcccccCCcccccCCCCHHHHHHHHHHCCCeEEEEE
Confidence            5789999876643311               158999999999999865443

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=80.02  E-value=1.6  Score=21.75  Aligned_cols=30  Identities=3%  Similarity=0.073  Sum_probs=22.7

Q ss_pred             CCeEEEEEec-cCCHHHHHHHHhhCCceEEE
Q psy477            7 KGILYLLVIK-ENDPEDIIHCLSQYGFMGKT   36 (60)
Q Consensus         7 ~G~~YLv~~~-~N~p~ei~~~~~~~G~~~~v   36 (60)
                      .|.+.+-.-. ..++++|.+.+++.||.+++
T Consensus        40 ~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v   70 (72)
T d1osda_          40 TRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             TTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            4555554433 46799999999999999885